ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 PRINTS PR00721 Stomatin signature 153 170 1.4E-10 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 PRINTS PR00721 Stomatin signature 199 217 1.4E-10 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 PRINTS PR00721 Stomatin signature 118 139 1.4E-10 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 PRINTS PR00721 Stomatin signature 70 92 1.4E-10 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 Pfam PF01145 SPFH domain / Band 7 family 68 239 1.0E-31 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 TIGRFAM TIGR01933 hflK: HflK protein 65 321 6.8E-100 T 11-11-2016 IPR010201 HflK GO:0016021 ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 SMART SM00244 63 223 1.1E-34 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS04395 cd0283c293ba27bca1fed4acb408f1db 375 SUPERFAMILY SSF117892 96 230 4.32E-20 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS12680 08f5a18b8d0dea23bf461c824d1fdc77 204 SUPERFAMILY SSF101322 3 203 1.57E-61 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 ATY42_RS12680 08f5a18b8d0dea23bf461c824d1fdc77 204 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 25 195 8.0E-87 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 ATY42_RS12680 08f5a18b8d0dea23bf461c824d1fdc77 204 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 204 30.363 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 ATY42_RS12680 08f5a18b8d0dea23bf461c824d1fdc77 204 Pfam PF04356 Protein of unknown function (DUF489) 8 196 1.6E-60 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 ATY42_RS12680 08f5a18b8d0dea23bf461c824d1fdc77 204 Gene3D G3DSA:1.10.3890.10 3 203 7.9E-65 T 11-11-2016 IPR007451 Uncharacterised protein family UPF0274 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 16 916 0.0 T 11-11-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 SUPERFAMILY SSF52016 654 916 2.35E-83 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Gene3D G3DSA:3.20.19.10 661 916 5.5E-76 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 ProSitePatterns PS00450 Aconitase family signature 1. 450 466 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Gene3D G3DSA:3.30.499.10 29 247 1.9E-76 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Pfam PF00330 Aconitase family (aconitate hydratase) 67 585 8.7E-181 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 ProSitePatterns PS01244 Aconitase family signature 2. 516 529 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Gene3D G3DSA:3.40.1060.10 248 366 8.4E-36 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 SUPERFAMILY SSF53732 3 649 4.05E-222 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Pfam PF00694 Aconitase C-terminal domain 715 846 3.2E-45 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Gene3D G3DSA:3.30.499.10 368 392 5.1E-63 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 Gene3D G3DSA:3.30.499.10 442 598 5.1E-63 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 215 230 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 291 304 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 277 290 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 371 385 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 454 465 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 201 214 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 144 157 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 168 176 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14310 0b151d389ecaf373a8e69bc9e19cb7a4 922 PRINTS PR00415 Aconitase family signature 516 529 1.0E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 PIRSF PIRSF002799 3 795 1.3E-280 T 11-11-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 SUPERFAMILY SSF53955 167 368 2.81E-57 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 Gene3D G3DSA:3.30.2060.10 76 162 3.4E-11 T 11-11-2016 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 31 761 3.7E-286 T 11-11-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 Pfam PF00912 Transglycosylase 168 346 2.9E-53 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 688 3.0E-16 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 Gene3D G3DSA:3.40.710.10 349 718 5.0E-92 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 SUPERFAMILY SSF56601 380 769 7.37E-98 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 SUPERFAMILY SSF56601 328 350 7.37E-98 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 Pfam PF14814 Bifunctional transglycosylase second domain 76 160 9.3E-18 T 11-11-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS08425 de41f1f99a340f3111804ff4e6adb429 814 Gene3D G3DSA:1.10.3810.10 171 348 1.2E-56 T 11-11-2016 ATY42_RS11370 3c98d247f68430eae99741100c70b0ca 346 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 33 326 1.9E-65 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 ATY42_RS11370 3c98d247f68430eae99741100c70b0ca 346 Gene3D G3DSA:3.40.50.300 53 153 1.8E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11370 3c98d247f68430eae99741100c70b0ca 346 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 26 337 5.1E-105 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 ATY42_RS11370 3c98d247f68430eae99741100c70b0ca 346 SUPERFAMILY SSF52540 53 202 2.54E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11370 3c98d247f68430eae99741100c70b0ca 346 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 7 342 37.149 T 11-11-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 ATY42_RS08835 f138dee02ffb4ccab3aeb069fb228dbc 364 Gene3D G3DSA:3.40.50.720 22 142 1.4E-15 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08835 f138dee02ffb4ccab3aeb069fb228dbc 364 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 26 129 5.6E-8 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ATY42_RS08835 f138dee02ffb4ccab3aeb069fb228dbc 364 SUPERFAMILY SSF51735 21 142 1.23E-13 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08915 999464f2b385bfd0714db5b44789ec36 186 SUPERFAMILY SSF56935 58 165 3.25E-12 T 11-11-2016 ATY42_RS08915 999464f2b385bfd0714db5b44789ec36 186 Gene3D G3DSA:2.170.130.10 69 166 2.5E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS08915 999464f2b385bfd0714db5b44789ec36 186 Pfam PF07715 TonB-dependent Receptor Plug Domain 84 168 5.7E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 Gene3D G3DSA:1.20.1560.10 23 313 3.3E-13 T 11-11-2016 ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 Pfam PF00005 ABC transporter 366 509 1.6E-19 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 SUPERFAMILY SSF52540 362 553 1.0E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 Gene3D G3DSA:3.40.50.300 368 553 2.8E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 SMART SM00382 369 556 4.2E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS14900 39e3dfc8d93823349aaa2fa624dba023 573 SUPERFAMILY SSF90123 22 316 1.07E-20 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SMART SM00448 761 873 8.6E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Pfam PF00072 Response regulator receiver domain 763 873 7.5E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SMART SM00388 516 581 1.3E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Pfam PF00512 His Kinase A (phospho-acceptor) domain 517 581 2.0E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Pfam PF12860 PAS fold 369 482 2.7E-40 T 11-11-2016 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SUPERFAMILY SSF52172 759 877 6.55E-22 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Gene3D G3DSA:3.40.50.2300 759 879 1.7E-20 T 11-11-2016 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SUPERFAMILY SSF103190 54 191 6.54E-13 T 11-11-2016 IPR029151 Periplasmic sensor domain-like ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 626 733 1.2E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Pfam PF02743 Cache domain 45 190 5.5E-12 T 11-11-2016 IPR033479 Double Cache domain 1 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SUPERFAMILY SSF55874 570 733 3.41E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SUPERFAMILY SSF47384 502 582 2.94E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Gene3D G3DSA:3.30.565.10 583 735 1.5E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SUPERFAMILY SSF55785 368 467 5.82E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Gene3D G3DSA:1.10.287.130 509 577 9.8E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Gene3D G3DSA:3.30.450.20 98 182 4.8E-7 T 11-11-2016 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 695 713 3.6E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 719 732 3.6E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 679 689 3.6E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 3.6E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 Gene3D G3DSA:3.30.450.20 357 476 9.8E-13 T 11-11-2016 ATY42_RS05400 374bd2e2a2703b61c76a38a9d7f4c6d1 881 SMART SM00387 625 735 7.7E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19160 1be882077e2a43e495127b20930d307c 78 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 68 3.5E-4 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS19160 1be882077e2a43e495127b20930d307c 78 SUPERFAMILY SSF54593 10 75 1.65E-12 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS19160 1be882077e2a43e495127b20930d307c 78 Gene3D G3DSA:3.10.180.10 12 72 4.3E-17 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS17315 cc9ef8be69ed3a39b435e48878ba7321 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 5.2E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS17315 cc9ef8be69ed3a39b435e48878ba7321 209 Gene3D G3DSA:1.10.357.10 20 183 4.5E-14 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS17315 cc9ef8be69ed3a39b435e48878ba7321 209 SUPERFAMILY SSF46689 9 80 8.21E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 98 223 1.4E-37 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 98 226 7.0E-70 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 SMART SM00771 95 225 2.6E-54 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 Hamap MF_00509 Cell division protein ZipA [zipA]. 5 227 17.57 T 11-11-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 Gene3D G3DSA:3.30.1400.10 94 232 6.1E-44 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 SUPERFAMILY SSF64383 94 232 1.31E-36 T 11-11-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 ATY42_RS11975 15cf8656df7c36aefe283cef5f2ae1dd 243 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 37 225 3.1E-68 T 11-11-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Pfam PF08264 Anticodon-binding domain of tRNA 701 856 5.9E-27 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 858 7.4E-266 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 934 20.941 T 11-11-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 SUPERFAMILY SSF47323 668 934 1.12E-67 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 SUPERFAMILY SSF50677 205 421 3.4E-42 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Gene3D G3DSA:3.40.50.620 423 653 3.4E-130 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Gene3D G3DSA:3.40.50.620 18 206 3.4E-130 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Pfam PF06827 Zinc finger found in FPG and IleRS 905 931 5.5E-7 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 577 586 1.9E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 1.9E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 1.9E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 419 434 1.9E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 544 557 1.9E-30 T 11-11-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Gene3D G3DSA:1.10.730.10 658 799 8.5E-42 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 29 657 4.0E-205 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 Gene3D G3DSA:3.90.740.10 241 422 6.8E-45 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 SUPERFAMILY SSF52374 5 203 1.61E-131 T 11-11-2016 ATY42_RS08000 c2eec6fd5833a678527df326f49f9f58 943 SUPERFAMILY SSF52374 421 662 1.61E-131 T 11-11-2016 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF55785 423 550 2.26E-33 T 11-11-2016 IPR000014 PAS domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 434 557 4.6E-27 T 11-11-2016 IPR000014 PAS domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 310 433 2.1E-11 T 11-11-2016 IPR000014 PAS domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:3.30.450.40 152 308 3.5E-17 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:3.30.450.40 578 728 3.1E-11 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:3.30.450.20 430 550 7.5E-37 T 11-11-2016 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:3.30.450.20 309 423 1.2E-26 T 11-11-2016 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF55874 801 970 4.85E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:3.30.565.10 813 972 8.6E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF47384 734 812 1.28E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:1.10.287.130 739 807 8.0E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF55785 299 423 5.41E-22 T 11-11-2016 IPR000014 PAS domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF55781 153 307 2.62E-23 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00086 384 426 5.5E-8 T 11-11-2016 IPR001610 PAC motif ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00086 510 552 1.1E-8 T 11-11-2016 IPR001610 PAC motif ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF00072 Response regulator receiver domain 1004 1116 1.0E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Gene3D G3DSA:3.40.50.2300 999 1121 2.9E-27 T 11-11-2016 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF52172 1000 1120 3.27E-27 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00091 438 504 8.6E-12 T 11-11-2016 IPR000014 PAS domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00091 312 378 0.012 T 11-11-2016 IPR000014 PAS domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00448 1001 1116 6.9E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF08448 PAS fold 320 427 6.8E-11 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00388 746 812 2.8E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF08447 PAS fold 461 544 3.3E-20 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF00512 His Kinase A (phospho-acceptor) domain 747 809 1.5E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00387 859 972 1.6E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF13185 GAF domain 609 718 2.8E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 914 924 2.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 931 949 2.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 956 969 2.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 910 2.0E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SUPERFAMILY SSF55781 595 726 1.74E-16 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00065 160 308 1.3E-14 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 SMART SM00065 574 727 0.0097 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF01590 GAF domain 160 294 4.7E-12 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS11520 d0ce6da7994c8c190750ef54e150dbe7 1131 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 859 971 4.2E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13840 19f91cfce9ea0aee6e1337b8b4eebc75 574 Gene3D G3DSA:1.20.1250.20 291 502 7.7E-12 T 11-11-2016 ATY42_RS13840 19f91cfce9ea0aee6e1337b8b4eebc75 574 Pfam PF07690 Major Facilitator Superfamily 42 455 1.4E-36 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS13840 19f91cfce9ea0aee6e1337b8b4eebc75 574 SUPERFAMILY SSF103473 27 503 4.84E-43 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS13840 19f91cfce9ea0aee6e1337b8b4eebc75 574 Gene3D G3DSA:1.20.1250.20 31 245 1.3E-16 T 11-11-2016 ATY42_RS05165 831465de0a9dec17460aeca6ad9b5014 650 Pfam PF11992 Domain of unknown function (DUF3488) 13 326 6.7E-83 T 11-11-2016 IPR021878 Protein of unknown function DUF3488 ATY42_RS05165 831465de0a9dec17460aeca6ad9b5014 650 SUPERFAMILY SSF54001 277 594 3.92E-63 T 11-11-2016 ATY42_RS05165 831465de0a9dec17460aeca6ad9b5014 650 Pfam PF01841 Transglutaminase-like superfamily 355 470 3.0E-26 T 11-11-2016 IPR002931 Transglutaminase-like ATY42_RS05165 831465de0a9dec17460aeca6ad9b5014 650 SMART SM00460 401 472 2.7E-20 T 11-11-2016 IPR002931 Transglutaminase-like ATY42_RS05165 831465de0a9dec17460aeca6ad9b5014 650 Gene3D G3DSA:3.90.260.10 306 589 2.4E-49 T 11-11-2016 IPR002931 Transglutaminase-like ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SUPERFAMILY SSF47384 171 254 1.82E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SMART SM00388 188 253 8.1E-24 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Pfam PF00072 Response regulator receiver domain 464 576 3.8E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SUPERFAMILY SSF47226 601 712 8.77E-17 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 416 1.3E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SUPERFAMILY SSF52172 459 580 3.7E-32 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SUPERFAMILY SSF55874 243 413 3.54E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Pfam PF00512 His Kinase A (phospho-acceptor) domain 188 253 8.2E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Gene3D G3DSA:1.20.120.160 596 711 9.5E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Pfam PF01627 Hpt domain 624 698 2.7E-6 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Gene3D G3DSA:3.40.50.2300 457 581 1.1E-32 T 11-11-2016 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 370 1.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 356 1.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 395 1.2E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SMART SM00387 300 417 1.2E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Gene3D G3DSA:3.30.565.10 254 415 5.1E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SMART SM00073 613 711 4.3E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 Gene3D G3DSA:1.10.287.130 180 248 5.5E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS14330 f98cb57771524ffb581a05bb83bfbf84 725 SMART SM00448 461 576 2.1E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 Gene3D G3DSA:2.40.180.10 24 375 2.8E-167 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PRINTS PR00067 Catalase signature 338 364 4.7E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PRINTS PR00067 Catalase signature 306 333 4.7E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PRINTS PR00067 Catalase signature 124 141 4.7E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PRINTS PR00067 Catalase signature 41 64 4.7E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PRINTS PR00067 Catalase signature 103 121 4.7E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PRINTS PR00067 Catalase signature 143 161 4.7E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 SMART SM01060 28 408 5.8E-247 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 ProSitePatterns PS00438 Catalase proximal active site signature. 64 80 - T 11-11-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 Pfam PF06628 Catalase-related immune-responsive 430 488 9.8E-15 T 11-11-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 PIRSF PIRSF038928 20 496 5.6E-177 T 11-11-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 Pfam PF00199 Catalase 28 405 1.7E-165 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 351 359 - T 11-11-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS01900 88b2acf2f4952c926c18812ffc7260f5 507 SUPERFAMILY SSF56634 23 495 1.15E-190 T 11-11-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 SUPERFAMILY SSF82866 77 297 5.36E-35 T 11-11-2016 ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 Pfam PF07549 SecD/SecF GG Motif 38 64 1.4E-7 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 15 303 26.399 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 Pfam PF02355 Protein export membrane protein 127 296 1.3E-47 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 2.3E-27 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 PRINTS PR01755 Bacterial translocase SecF protein signature 161 175 2.3E-27 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 2.3E-27 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 PRINTS PR01755 Bacterial translocase SecF protein signature 42 57 2.3E-27 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 43 292 4.7E-63 T 11-11-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 82 289 2.1E-45 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATY42_RS12295 998708d61077ee4da3c2fc1ff87760b9 322 Gene3D G3DSA:1.20.1640.10 104 298 2.3E-21 T 11-11-2016 ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 Pfam PF00593 TonB dependent receptor 478 718 1.4E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 SUPERFAMILY SSF56935 24 720 3.05E-97 T 11-11-2016 ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 Gene3D G3DSA:2.170.130.10 29 169 7.2E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 63 720 1.4E-172 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 Gene3D G3DSA:2.40.170.20 173 720 1.4E-112 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 703 720 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site ATY42_RS04155 1edb705682039578cfa1fb2bf0840465 720 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 159 1.0E-6 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 SUPERFAMILY SSF54826 4 136 1.04E-53 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 ProSitePatterns PS00164 Enolase signature. 336 349 - T 11-11-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PRINTS PR00148 Enolase signature 365 382 2.9E-45 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PRINTS PR00148 Enolase signature 37 51 2.9E-45 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PRINTS PR00148 Enolase signature 107 123 2.9E-45 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PRINTS PR00148 Enolase signature 313 324 2.9E-45 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PRINTS PR00148 Enolase signature 336 350 2.9E-45 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PRINTS PR00148 Enolase signature 163 176 2.9E-45 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 Gene3D G3DSA:3.30.390.10 3 126 1.3E-52 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 427 3.3E-200 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 SMART SM01193 4 134 2.1E-89 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 Pfam PF03952 Enolase, N-terminal domain 4 134 3.3E-56 T 11-11-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 SUPERFAMILY SSF51604 142 426 8.25E-126 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 Hamap MF_00318 Enolase [eno]. 2 413 43.977 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 PIRSF PIRSF001400 1 427 6.9E-185 T 11-11-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 SMART SM01192 141 427 7.1E-217 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 425 3.2E-131 T 11-11-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14810 839164319f0595794b6feeb0f138aeef 430 Gene3D G3DSA:3.20.20.120 129 426 2.0E-130 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 12 281 8.1E-78 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 1.3E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 62 77 1.3E-6 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 Pfam PF01926 50S ribosome-binding GTPase 13 127 1.7E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 SUPERFAMILY SSF54814 184 299 2.75E-38 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 Gene3D G3DSA:3.40.50.300 9 194 3.1E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 SUPERFAMILY SSF52540 13 207 1.79E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 Hamap MF_00367 GTPase Era [era]. 8 298 34.598 T 11-11-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 169 2.9E-28 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 Gene3D G3DSA:3.30.300.20 195 294 7.3E-36 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS08995 ee6b553f8429d6558e853020ef58ee65 299 Pfam PF07650 KH domain 211 286 9.1E-20 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 PRINTS PR00059 Ribosomal protein L6 signature 139 160 3.5E-33 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 PRINTS PR00059 Ribosomal protein L6 signature 69 94 3.5E-33 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 PRINTS PR00059 Ribosomal protein L6 signature 97 113 3.5E-33 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 Gene3D G3DSA:3.90.930.12 81 174 3.4E-39 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.37 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 11-11-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 SUPERFAMILY SSF56053 2 80 6.24E-19 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 SUPERFAMILY SSF56053 81 174 6.62E-35 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 PIRSF PIRSF002162 1 175 8.2E-42 T 11-11-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 Pfam PF00347 Ribosomal protein L6 88 162 7.0E-19 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 Pfam PF00347 Ribosomal protein L6 12 80 4.9E-16 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 1.2E-68 T 11-11-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATY42_RS17970 9d74e78a4890e406d279e486158a6e21 175 Gene3D G3DSA:3.90.930.12 2 80 4.1E-22 T 11-11-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 352 2.0E-118 T 11-11-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 SUPERFAMILY SSF52440 2 95 1.58E-22 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 Pfam PF02222 ATP-grasp domain 107 279 6.5E-59 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 351 42.061 T 11-11-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 Gene3D G3DSA:3.30.1490.20 113 180 1.2E-22 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 Gene3D G3DSA:3.30.470.20 181 359 2.0E-63 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 SUPERFAMILY SSF51246 304 371 7.85E-15 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 Gene3D G3DSA:3.40.50.20 2 106 5.0E-30 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS16125 590eccefd6cca0d86b76425bc5bc0f80 381 SUPERFAMILY SSF56059 98 299 6.54E-64 T 11-11-2016 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 427 40.472 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PIRSF PIRSF000099 1 429 2.6E-158 T 11-11-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 SUPERFAMILY SSF53720 6 427 1.16E-78 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 Gene3D G3DSA:3.40.50.1980 28 240 2.2E-73 T 11-11-2016 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 Pfam PF00815 Histidinol dehydrogenase 26 427 2.1E-161 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 426 4.8E-159 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 11-11-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 169 195 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 199 224 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS11025 5aa77337620bb8c9bf166fefc65a31f4 431 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 2.5E-92 T 11-11-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 SUPERFAMILY SSF51445 5 138 4.45E-129 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 SUPERFAMILY SSF51445 474 766 4.45E-129 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 SUPERFAMILY SSF51445 197 440 4.45E-129 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Pfam PF00128 Alpha amylase, catalytic domain 24 118 1.6E-14 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Gene3D G3DSA:1.10.10.470 565 667 1.6E-26 T 11-11-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Gene3D G3DSA:3.20.20.80 6 96 1.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Gene3D G3DSA:3.20.20.80 676 799 1.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Gene3D G3DSA:3.20.20.80 524 564 1.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Gene3D G3DSA:3.20.20.80 255 338 1.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 Gene3D G3DSA:3.30.1590.10 97 239 9.2E-43 T 11-11-2016 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 SMART SM00642 7 743 8.8E-7 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00325 f05e6503062d39f9475e0956a4786e06 867 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 5 863 0.0 T 11-11-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 ATY42_RS18225 b37c77f963688db1e03f9bd3dc5e57de 198 Gene3D G3DSA:3.40.50.360 1 196 2.5E-66 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS18225 b37c77f963688db1e03f9bd3dc5e57de 198 SUPERFAMILY SSF52218 1 195 3.41E-57 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS18225 b37c77f963688db1e03f9bd3dc5e57de 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 197 31.49 T 11-11-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 ATY42_RS18225 b37c77f963688db1e03f9bd3dc5e57de 198 Pfam PF03358 NADPH-dependent FMN reductase 64 129 2.8E-9 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATY42_RS18225 b37c77f963688db1e03f9bd3dc5e57de 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 2.8E-48 T 11-11-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 Pfam PF01590 GAF domain 24 154 4.0E-6 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 Gene3D G3DSA:3.30.450.40 24 163 7.7E-16 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 SMART SM00388 182 247 7.4E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 SMART SM00065 16 163 1.6E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 396 3.0E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 183 243 1.5E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 SUPERFAMILY SSF55874 259 400 8.36E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 Gene3D G3DSA:1.10.287.130 178 243 2.9E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 SUPERFAMILY SSF47384 175 243 4.32E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 Gene3D G3DSA:3.30.565.10 259 401 7.7E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01055 8d0c6ddc3b9c42a8c70e131c9bbc282d 414 SUPERFAMILY SSF55781 23 161 2.26E-18 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS03460 8db827515a2bc71bb633d78b8192f57a 186 SMART SM00986 24 179 3.4E-11 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS03460 8db827515a2bc71bb633d78b8192f57a 186 SMART SM00987 24 179 3.4E-11 T 11-11-2016 ATY42_RS03460 8db827515a2bc71bb633d78b8192f57a 186 Gene3D G3DSA:3.40.470.10 23 185 5.5E-37 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS03460 8db827515a2bc71bb633d78b8192f57a 186 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 22 178 2.6E-41 T 11-11-2016 IPR026353 Hypoxanthine-DNA glycosylase ATY42_RS03460 8db827515a2bc71bb633d78b8192f57a 186 Pfam PF03167 Uracil DNA glycosylase superfamily 28 178 4.4E-11 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS03460 8db827515a2bc71bb633d78b8192f57a 186 SUPERFAMILY SSF52141 23 184 2.75E-38 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS12395 e4faea2c8dd9ffda6719392f6d267cf0 343 Pfam PF13592 Winged helix-turn helix 95 154 5.4E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS12395 e4faea2c8dd9ffda6719392f6d267cf0 343 SUPERFAMILY SSF46689 19 129 1.51E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12395 e4faea2c8dd9ffda6719392f6d267cf0 343 Pfam PF13551 Winged helix-turn helix 20 77 6.6E-14 T 11-11-2016 ATY42_RS12395 e4faea2c8dd9ffda6719392f6d267cf0 343 Pfam PF13358 DDE superfamily endonuclease 171 308 1.3E-31 T 11-11-2016 ATY42_RS04120 2cb64c57e9f7d135106d79e5478e81ab 269 ProDom PD046566 PATHWAY N GENERAL SECRETION PRECURSOR SIGNAL MEMBRANE XPSN TRANSMEMBRANE INNER 1 165 6.0E-90 T 11-11-2016 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 SUPERFAMILY SSF51246 331 444 1.05E-44 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.2E-40 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 SMART SM00878 336 441 7.0E-69 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 Gene3D G3DSA:3.40.50.20 1 129 6.2E-51 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 SUPERFAMILY SSF52440 1 113 5.11E-47 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 Gene3D G3DSA:3.30.470.20 204 444 1.5E-97 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 SUPERFAMILY SSF56059 83 344 6.01E-67 T 11-11-2016 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 4.5E-232 T 11-11-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 Gene3D G3DSA:3.30.1490.20 130 203 1.4E-29 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.0E-81 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS02655 bbc6034dc7d6b7c9a41f6fb43a62d850 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.8E-44 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS14145 20002b4131625e09d83b5fc2bcda9319 260 Pfam PF13614 AAA domain 1 176 4.1E-38 T 11-11-2016 IPR025669 AAA domain ATY42_RS14145 20002b4131625e09d83b5fc2bcda9319 260 SUPERFAMILY SSF52540 1 250 8.1E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14145 20002b4131625e09d83b5fc2bcda9319 260 Gene3D G3DSA:3.40.50.300 1 250 5.2E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00635 14d1019a7bdd04fc1cc1e30c3ba844b7 156 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS00635 14d1019a7bdd04fc1cc1e30c3ba844b7 156 Gene3D G3DSA:3.90.79.10 12 147 1.8E-31 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS00635 14d1019a7bdd04fc1cc1e30c3ba844b7 156 SUPERFAMILY SSF55811 13 147 3.38E-31 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS00635 14d1019a7bdd04fc1cc1e30c3ba844b7 156 Pfam PF00293 NUDIX domain 19 138 1.0E-19 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS00635 14d1019a7bdd04fc1cc1e30c3ba844b7 156 PRINTS PR00502 NUDIX hydrolase family signature 61 76 3.7E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATY42_RS00635 14d1019a7bdd04fc1cc1e30c3ba844b7 156 PRINTS PR00502 NUDIX hydrolase family signature 47 61 3.7E-6 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATY42_RS03200 f10e8d7ec1869f567b381347562035d5 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 3 406 1.1E-167 T 11-11-2016 IPR023874 DNA modification/repair radical SAM protein, putative ATY42_RS03200 f10e8d7ec1869f567b381347562035d5 414 SUPERFAMILY SSF102114 45 184 3.27E-15 T 11-11-2016 ATY42_RS03200 f10e8d7ec1869f567b381347562035d5 414 Gene3D G3DSA:3.20.20.70 52 174 4.5E-10 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS03200 f10e8d7ec1869f567b381347562035d5 414 SUPERFAMILY SSF47781 310 382 9.45E-8 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS03130 efad339167436936376328cc840824ca 165 Gene3D G3DSA:3.40.50.2300 3 120 1.3E-32 T 11-11-2016 ATY42_RS03130 efad339167436936376328cc840824ca 165 Pfam PF00072 Response regulator receiver domain 7 115 1.6E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03130 efad339167436936376328cc840824ca 165 SUPERFAMILY SSF52172 1 125 1.99E-32 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS03130 efad339167436936376328cc840824ca 165 SMART SM00448 4 116 2.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS17910 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS21905 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS11535 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS19065 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS09280 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS16710 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS16800 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS16760 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS12390 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS13550 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS20530 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS08295 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS20215 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS09975 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS20665 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS14415 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS07700 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS02500 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS11260 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS13305 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS19670 8af1cb64cba1e3cf9d4446e02ba78328 128 Pfam PF13586 Transposase DDE domain 42 124 2.6E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 Pfam PF00145 C-5 cytosine-specific DNA methylase 7 361 3.1E-67 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 360 5.7E-59 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 Gene3D G3DSA:3.90.120.10 284 348 6.9E-11 T 11-11-2016 ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 75 87 - T 11-11-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 SUPERFAMILY SSF53335 3 209 1.64E-87 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 SUPERFAMILY SSF53335 271 366 1.64E-87 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 Gene3D G3DSA:3.40.50.150 7 205 5.5E-64 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 113 127 1.6E-17 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 161 174 1.6E-17 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 1.6E-17 T 11-11-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 ATY42_RS02940 67cb5a256a98dcab4da6a8889ef2677c 424 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 342 360 - T 11-11-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 10 319 49.559 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 197 208 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 SUPERFAMILY SSF54862 174 324 2.85E-18 T 11-11-2016 ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 Pfam PF08331 Domain of unknown function (DUF1730) 65 144 4.6E-23 T 11-11-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 17 353 2.4E-150 T 11-11-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 Pfam PF13484 4Fe-4S double cluster binding domain 196 260 2.9E-19 T 11-11-2016 ATY42_RS13545 f3662a58d4fbe799a2133f416d0c2066 355 Gene3D G3DSA:3.30.70.20 195 267 6.8E-6 T 11-11-2016 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 Pfam PF01467 Cytidylyltransferase-like 9 69 1.9E-9 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 SUPERFAMILY SSF55811 204 349 4.06E-30 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 62 4.3E-10 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 Gene3D G3DSA:3.90.79.10 205 346 1.2E-35 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 Gene3D G3DSA:3.40.50.620 5 201 1.6E-42 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 SUPERFAMILY SSF52374 9 180 1.81E-20 T 11-11-2016 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 Pfam PF00293 NUDIX domain 219 335 1.4E-15 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS19860 111b7d381add6766cedf74563e430a06 351 ProSitePatterns PS00893 Nudix box signature. 245 266 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS08765 44ee439cba3211fd4de38ce2714d1cc5 297 Gene3D G3DSA:3.40.50.1820 17 275 8.4E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08765 44ee439cba3211fd4de38ce2714d1cc5 297 Pfam PF12697 Alpha/beta hydrolase family 37 263 6.7E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS08765 44ee439cba3211fd4de38ce2714d1cc5 297 SUPERFAMILY SSF53474 17 275 1.97E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21065 778c1c97aea89d815ed50ac8e22f9744 335 ProSitePatterns PS01007 Transposases, Mutator family, signature. 164 188 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS21065 778c1c97aea89d815ed50ac8e22f9744 335 Pfam PF00872 Transposase, Mutator family 3 309 8.3E-96 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 Pfam PF03466 LysR substrate binding domain 87 291 2.0E-41 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS21850 27e20787567a614a69706975cd712caf 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.9E-23 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 SUPERFAMILY SSF46785 1 85 1.58E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21850 27e20787567a614a69706975cd712caf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 Gene3D G3DSA:3.40.190.10 88 177 2.6E-24 T 11-11-2016 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 SUPERFAMILY SSF53850 88 291 1.49E-35 T 11-11-2016 ATY42_RS21850 27e20787567a614a69706975cd712caf 295 Gene3D G3DSA:1.10.10.10 1 86 2.4E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21850 27e20787567a614a69706975cd712caf 295 Gene3D G3DSA:3.40.190.10 178 266 1.8E-36 T 11-11-2016 ATY42_RS19380 d7aa46bbb53ca457e8d35e14b5460bd6 218 SUPERFAMILY SSF53474 3 128 1.19E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19380 d7aa46bbb53ca457e8d35e14b5460bd6 218 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 4 156 6.1E-27 T 11-11-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 ATY42_RS19380 d7aa46bbb53ca457e8d35e14b5460bd6 218 Gene3D G3DSA:3.40.50.1820 3 123 3.7E-27 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15040 b11b0cd57403062e91d5dbff9ce63fba 156 SUPERFAMILY SSF82093 30 136 3.92E-36 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 ATY42_RS15040 b11b0cd57403062e91d5dbff9ce63fba 156 Gene3D G3DSA:2.40.50.140 26 124 7.7E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS15040 b11b0cd57403062e91d5dbff9ce63fba 156 Pfam PF03100 CcmE 5 130 8.5E-44 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 ATY42_RS15040 b11b0cd57403062e91d5dbff9ce63fba 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 30.784 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 119 132 - T 11-11-2016 IPR033135 ClpP, histidine active site ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 9 199 6.0E-106 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 26 41 4.0E-52 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 175 194 4.0E-52 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 66 86 4.0E-52 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 97 114 4.0E-52 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 PRINTS PR00127 Clp protease catalytic subunit P signature 118 137 4.0E-52 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 Gene3D G3DSA:3.90.226.10 10 199 3.3E-88 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 97 108 - T 11-11-2016 IPR018215 ClpP, Ser active site ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 Pfam PF00574 Clp protease 19 199 5.4E-87 T 11-11-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 10 200 44.124 T 11-11-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ATY42_RS04945 ac86f1e142199991f71f6052ec364f9b 208 SUPERFAMILY SSF52096 10 199 1.03E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS14735 38312473cbd63e799dc049f8f8337fd5 300 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 56 69 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS14735 38312473cbd63e799dc049f8f8337fd5 300 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 21 278 4.4E-100 T 11-11-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ATY42_RS14735 38312473cbd63e799dc049f8f8337fd5 300 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 22 37 - T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS14735 38312473cbd63e799dc049f8f8337fd5 300 Gene3D G3DSA:3.20.20.20 17 280 2.3E-108 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS14735 38312473cbd63e799dc049f8f8337fd5 300 Pfam PF00809 Pterin binding enzyme 23 263 1.6E-84 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS14735 38312473cbd63e799dc049f8f8337fd5 300 SUPERFAMILY SSF51717 14 280 1.96E-100 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Pfam PF00563 EAL domain 440 674 4.1E-75 T 11-11-2016 IPR001633 EAL domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 SUPERFAMILY SSF141868 439 685 1.44E-90 T 11-11-2016 IPR001633 EAL domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 SMART SM00267 252 423 4.7E-53 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 SMART SM00052 433 679 7.7E-116 T 11-11-2016 IPR001633 EAL domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 261 422 5.8E-38 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 SUPERFAMILY SSF55073 268 424 2.98E-46 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 51 106 6.2E-21 T 11-11-2016 IPR005330 MHYT domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 240 2.7E-8 T 11-11-2016 IPR005330 MHYT domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Pfam PF03707 Bacterial signalling protein N terminal repeat 114 168 1.9E-10 T 11-11-2016 IPR005330 MHYT domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Pfam PF00990 Diguanylate cyclase, GGDEF domain 263 419 8.9E-43 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Gene3D G3DSA:3.30.70.270 265 430 6.9E-53 T 11-11-2016 ATY42_RS12970 0bbcfece42f0a18fae822f9f51fa67df 696 Gene3D G3DSA:3.20.20.450 436 684 5.3E-100 T 11-11-2016 IPR001633 EAL domain ATY42_RS19495 9b545ce2945ae1f04d99c7f57c01b316 366 Pfam PF00534 Glycosyl transferases group 1 222 285 4.1E-7 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS19495 9b545ce2945ae1f04d99c7f57c01b316 366 Gene3D G3DSA:3.40.50.2000 221 325 4.5E-8 T 11-11-2016 ATY42_RS19495 9b545ce2945ae1f04d99c7f57c01b316 366 SUPERFAMILY SSF53756 113 329 8.79E-19 T 11-11-2016 ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 SUPERFAMILY SSF52540 686 833 6.75E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 SUPERFAMILY SSF52540 452 619 6.75E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 Pfam PF04851 Type III restriction enzyme, res subunit 437 617 1.3E-33 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 Pfam PF13643 Domain of unknown function (DUF4145) 24 111 1.7E-5 T 11-11-2016 IPR025285 Domain of unknown function DUF4145 ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 Gene3D G3DSA:3.40.50.300 706 837 1.8E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 SMART SM00490 734 824 3.0E-4 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 Gene3D G3DSA:3.40.50.300 431 629 1.9E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 Pfam PF00271 Helicase conserved C-terminal domain 719 822 1.7E-8 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 SMART SM00487 435 645 4.9E-15 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS17395 c8e1e55cff39d9d289e3123817ca78fe 1157 Pfam PF08463 EcoEI R protein C-terminal 994 1153 3.5E-32 T 11-11-2016 IPR013670 EcoEI R protein C-terminal domain GO:0003677|GO:0003824|GO:0006304 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 Pfam PF00344 SecY translocase 76 421 9.1E-109 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 438 27.872 T 11-11-2016 IPR026593 Protein translocase subunit SecY ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 ProSitePatterns PS00756 Protein secY signature 2. 175 192 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 434 3.8E-124 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-11-2016 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 156 181 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 182 205 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 375 393 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 274 293 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 320 342 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 4.5E-88 T 11-11-2016 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 SUPERFAMILY SSF103491 15 429 1.1E-121 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 Gene3D G3DSA:1.10.3370.10 16 442 4.4E-155 T 11-11-2016 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS17945 88b391f12be4c5d26076b3c30b4d43a4 454 PIRSF PIRSF004557 14 446 5.7E-115 T 11-11-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS02325 06cc2d9bfdeb1ddc3bcd850614993485 293 Gene3D G3DSA:3.30.70.1070 214 292 3.1E-20 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS02325 06cc2d9bfdeb1ddc3bcd850614993485 293 SUPERFAMILY SSF110997 216 291 2.09E-15 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS02325 06cc2d9bfdeb1ddc3bcd850614993485 293 Pfam PF05036 Sporulation related domain 217 291 9.2E-15 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 134 235 2.0E-38 T 11-11-2016 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 110 234 3.92E-47 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 11-11-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 235 401 2.28E-67 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 PIRSF PIRSF000497 1 401 5.5E-170 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 11 133 9.1E-48 T 11-11-2016 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 SUPERFAMILY SSF55973 3 109 5.89E-46 T 11-11-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 371 3.4E-68 T 11-11-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 370 1.3E-181 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 400 56.211 T 11-11-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 233 5.6E-43 T 11-11-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Gene3D G3DSA:3.30.300.10 246 401 1.4E-70 T 11-11-2016 ATY42_RS19060 218140897aa468d7afda6a20b89e9dea 403 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 101 1.1E-41 T 11-11-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ATY42_RS22665 bb4217cb219b2b2a7e867a190c8b5091 245 SUPERFAMILY SSF52540 1 237 1.22E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22665 bb4217cb219b2b2a7e867a190c8b5091 245 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS22665 bb4217cb219b2b2a7e867a190c8b5091 245 Gene3D G3DSA:3.40.50.300 3 237 5.9E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22665 bb4217cb219b2b2a7e867a190c8b5091 245 SMART SM00382 26 212 8.5E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS22665 bb4217cb219b2b2a7e867a190c8b5091 245 Pfam PF00005 ABC transporter 17 162 1.4E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.233 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 224 293 3.0E-13 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 Gene3D G3DSA:3.40.190.10 109 197 1.5E-38 T 11-11-2016 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 229 245 - T 11-11-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 5.3E-101 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 8.6E-42 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 8.6E-42 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 PRINTS PR00151 Porphobilinogen deaminase signature 228 245 8.6E-42 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 8.6E-42 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 8.6E-42 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 SUPERFAMILY SSF54782 221 302 2.35E-22 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 Gene3D G3DSA:3.30.160.40 221 302 2.8E-23 T 11-11-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 210 3.9E-75 T 11-11-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 SUPERFAMILY SSF53850 2 216 4.66E-82 T 11-11-2016 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 Gene3D G3DSA:3.40.190.10 2 108 2.0E-43 T 11-11-2016 ATY42_RS20125 df195ff3e06cee75815f13c1760b0ba0 304 PIRSF PIRSF001438 1 304 2.7E-112 T 11-11-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:1.10.287.130 805 871 6.7E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:2.120.10.30 151 215 6.0E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:2.120.10.30 480 608 1.5E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:2.120.10.30 256 287 6.0E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:2.120.10.30 356 412 1.5E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SUPERFAMILY SSF55874 864 1040 2.88E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:2.120.10.30 47 150 1.8E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1022 1035 1.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 998 1016 1.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 980 990 1.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 PRINTS PR00344 Bacterial sensor protein C-terminal signature 962 976 1.7E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Pfam PF07494 Two component regulator propeller 35 57 0.0058 T 11-11-2016 IPR011110 Two component regulator propeller ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Pfam PF00072 Response regulator receiver domain 1064 1172 1.1E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SMART SM00387 922 1038 7.6E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Pfam PF07495 Y_Y_Y domain 693 755 4.6E-10 T 11-11-2016 IPR011123 Two component regulator three Y ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SMART SM00388 810 875 8.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 922 1036 4.1E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:3.30.565.10 876 1037 1.4E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SUPERFAMILY SSF50998 354 521 1.73E-15 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SUPERFAMILY SSF50998 568 641 1.73E-15 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SUPERFAMILY SSF50998 132 284 1.73E-15 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SMART SM00448 1061 1172 6.5E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Pfam PF00512 His Kinase A (phospho-acceptor) domain 810 875 1.4E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 Gene3D G3DSA:3.40.50.2300 1057 1179 3.0E-30 T 11-11-2016 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SUPERFAMILY SSF47384 798 876 1.86E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08865 0b18b25edacfae633e3b7bd9957685ee 1191 SUPERFAMILY SSF52172 1060 1176 1.99E-29 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS01435 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS01360 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS00375 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS01495 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS17905 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS19605 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS16295 0901729112ff9df8a02b8d9abf665009 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 Pfam PF13932 GidA associated domain 409 622 1.5E-68 T 11-11-2016 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 Pfam PF01134 Glucose inhibited division protein A 9 403 8.5E-160 T 11-11-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 SUPERFAMILY SSF51905 8 69 1.5E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 SUPERFAMILY SSF51905 100 267 1.5E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 279 293 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 627 1.8E-264 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 SMART SM01228 552 623 7.3E-41 T 11-11-2016 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 374 397 - T 11-11-2016 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 Gene3D G3DSA:3.50.50.60 8 238 9.4E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00990 58f55e6321f723e0af1a52c79263a23c 634 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 630 41.475 T 11-11-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 ATY42_RS09270 128d6acf8b7b46995faff1cea0ee3c39 456 Gene3D G3DSA:3.40.50.1820 268 448 2.7E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09270 128d6acf8b7b46995faff1cea0ee3c39 456 SUPERFAMILY SSF53474 40 163 2.84E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09270 128d6acf8b7b46995faff1cea0ee3c39 456 Pfam PF06057 Bacterial virulence protein (VirJ) 266 453 3.0E-83 T 11-11-2016 IPR010333 Bacterial virulence ATY42_RS09270 128d6acf8b7b46995faff1cea0ee3c39 456 SUPERFAMILY SSF53474 260 453 7.5E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09270 128d6acf8b7b46995faff1cea0ee3c39 456 Gene3D G3DSA:3.40.50.1820 44 211 5.9E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09270 128d6acf8b7b46995faff1cea0ee3c39 456 PIRSF PIRSF029063 1 456 6.3E-176 T 11-11-2016 IPR011225 Type IV secretory pathway, VirJ component ATY42_RS20630 e69b82cc77e523d41c13bae190af208b 268 Gene3D G3DSA:3.40.80.10 36 191 7.1E-52 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS20630 e69b82cc77e523d41c13bae190af208b 268 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 49 174 1.4E-21 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS20630 e69b82cc77e523d41c13bae190af208b 268 SUPERFAMILY SSF55846 36 189 5.1E-46 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS20630 e69b82cc77e523d41c13bae190af208b 268 SMART SM00644 38 173 2.7E-25 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS01000 2df778e5d2c2c0cb7ef33b8da338128b 319 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ATY42_RS01000 2df778e5d2c2c0cb7ef33b8da338128b 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 20 306 1.1E-67 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS01000 2df778e5d2c2c0cb7ef33b8da338128b 319 Gene3D G3DSA:3.40.50.1100 75 314 2.8E-58 T 11-11-2016 ATY42_RS01000 2df778e5d2c2c0cb7ef33b8da338128b 319 SUPERFAMILY SSF53686 9 315 1.83E-78 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 SUPERFAMILY SSF103025 3 281 4.24E-94 T 11-11-2016 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Gene3D G3DSA:2.40.30.110 283 362 2.1E-24 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 358 4.2E-130 T 11-11-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 SUPERFAMILY SSF101790 274 361 6.38E-22 T 11-11-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 45.285 T 11-11-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Gene3D G3DSA:3.30.1360.120 3 53 3.9E-52 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Gene3D G3DSA:3.30.1360.120 144 236 3.9E-52 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 353 1.0E-18 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 259 3.5E-89 T 11-11-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 PIRSF PIRSF006487 1 364 6.2E-85 T 11-11-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ATY42_RS08730 d7469333ecdd6a9ab83658ca1f42f81c 369 Gene3D G3DSA:3.30.70.1400 54 137 6.8E-31 T 11-11-2016 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 PIRSF PIRSF500064 47 885 0.0 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 72 870 0.0 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 SMART SM00563 358 485 8.5E-29 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 64 874 29.551 T 11-11-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 SUPERFAMILY SSF69593 328 542 9.29E-29 T 11-11-2016 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 Gene3D G3DSA:3.40.1130.10 343 491 1.3E-8 T 11-11-2016 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 Pfam PF01553 Acyltransferase 343 482 1.4E-23 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS01120 67d4a03467e1985702a66fdfbfca5d5d 886 PIRSF PIRSF000437 72 883 0.0 T 11-11-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 66 79 - T 11-11-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 14 231 1.8E-65 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 Gene3D G3DSA:3.20.20.70 11 234 6.1E-68 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 11 235 31.996 T 11-11-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 SUPERFAMILY SSF51366 12 234 6.91E-60 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 13 230 1.2E-40 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS01090 0dd54162db3fc4e462029af29ba4f30f 243 SMART SM00934 13 230 8.1E-71 T 11-11-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 Pfam PF00085 Thioredoxin 5 106 4.1E-32 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 TIGRFAM TIGR01068 thioredoxin: thioredoxin 10 107 7.0E-38 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 PIRSF PIRSF000077 2 108 9.1E-42 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 PRINTS PR00421 Thioredoxin family signature 24 32 4.1E-8 T 11-11-2016 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 PRINTS PR00421 Thioredoxin family signature 32 41 4.1E-8 T 11-11-2016 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 PRINTS PR00421 Thioredoxin family signature 72 83 4.1E-8 T 11-11-2016 ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 Gene3D G3DSA:3.40.30.10 2 109 4.3E-38 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS21600 be40aa096acd41b505fb5b542bc271d4 113 SUPERFAMILY SSF52833 3 109 2.81E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 446 4.3E-190 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Gene3D G3DSA:3.40.120.10 253 370 9.2E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 1.0E-42 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 SUPERFAMILY SSF53738 158 258 3.45E-27 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 SUPERFAMILY SSF53738 260 366 1.1E-27 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 256 6.7E-18 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Gene3D G3DSA:3.40.120.10 4 153 1.3E-46 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Gene3D G3DSA:3.30.310.50 371 447 4.6E-14 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 SUPERFAMILY SSF53738 3 167 7.85E-47 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 367 1.6E-28 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 448 44.632 T 11-11-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 443 1.1E-11 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 2.8E-11 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 Gene3D G3DSA:3.40.120.10 178 251 9.7E-25 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS16325 828b47b7517c0290d73b6b06dff6dcc5 449 SUPERFAMILY SSF55957 361 448 2.49E-16 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 PIRSF PIRSF002811 1 581 2.0E-136 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 SUPERFAMILY SSF56731 114 424 5.62E-104 T 11-11-2016 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 SUPERFAMILY SSF117023 448 579 5.49E-34 T 11-11-2016 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Gene3D G3DSA:1.10.860.10 438 580 1.3E-42 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Pfam PF13155 Toprim-like 264 350 3.7E-14 T 11-11-2016 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 SMART SM00400 35 89 6.2E-32 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Pfam PF08278 DNA primase DnaG DnaB-binding 452 575 1.4E-27 T 11-11-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 SMART SM00493 261 332 1.1E-20 T 11-11-2016 IPR006171 Toprim domain ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Gene3D G3DSA:3.90.580.10 2 100 1.8E-39 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 TIGRFAM TIGR01391 dnaG: DNA primase 3 419 3.6E-137 T 11-11-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 1.9E-10 T 11-11-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Pfam PF08275 DNA primase catalytic core, N-terminal domain 124 253 3.7E-38 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 SMART SM00766 451 576 1.8E-33 T 11-11-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Gene3D G3DSA:3.40.1360.10 243 368 1.4E-44 T 11-11-2016 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 SUPERFAMILY SSF57783 1 99 1.29E-35 T 11-11-2016 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Gene3D G3DSA:1.20.50.20 370 424 1.2E-20 T 11-11-2016 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Gene3D G3DSA:3.90.980.10 113 242 6.8E-40 T 11-11-2016 IPR013264 DNA primase, catalytic core, N-terminal ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Pfam PF01807 CHC2 zinc finger 5 100 9.2E-38 T 11-11-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ATY42_RS20790 d82ecfd7b481cd3547268c4b8d584699 582 Hamap MF_00974 DNA primase [dnaG]. 3 577 28.786 T 11-11-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 SUPERFAMILY SSF63418 9 100 2.88E-19 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Gene3D G3DSA:3.90.190.20 336 477 1.6E-53 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Pfam PF08245 Mur ligase middle domain 109 311 3.6E-48 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 485 33.659 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Pfam PF01225 Mur ligase family, catalytic domain 22 96 2.9E-10 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 1.7E-19 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Gene3D G3DSA:3.40.1390.10 15 98 2.2E-19 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 Gene3D G3DSA:3.40.1190.10 100 335 1.8E-78 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 SUPERFAMILY SSF53623 100 331 3.27E-74 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 20 485 4.9E-151 T 11-11-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ATY42_RS19275 ac16fe55d6df9d237051d18074d9960d 495 SUPERFAMILY SSF53244 332 486 5.36E-46 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS13865 2be18a0ee3d1b27adf70830eec001772 434 Pfam PF04286 Protein of unknown function (DUF445) 55 431 1.4E-103 T 11-11-2016 IPR007383 Protein of unknown function DUF445 ATY42_RS13865 2be18a0ee3d1b27adf70830eec001772 434 Gene3D G3DSA:1.10.357.10 242 332 5.5E-4 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS06505 263ccf97549b6811cc067bbe8c53c020 265 SUPERFAMILY SSF56752 13 244 2.62E-38 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 ATY42_RS06505 263ccf97549b6811cc067bbe8c53c020 265 Gene3D G3DSA:3.30.470.10 24 92 6.1E-9 T 11-11-2016 ATY42_RS06505 263ccf97549b6811cc067bbe8c53c020 265 Gene3D G3DSA:3.20.10.10 114 229 5.4E-11 T 11-11-2016 ATY42_RS06505 263ccf97549b6811cc067bbe8c53c020 265 Pfam PF01063 Amino-transferase class IV 25 229 2.3E-29 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 Gene3D G3DSA:2.40.170.20 508 575 6.3E-55 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 Gene3D G3DSA:2.40.170.20 237 456 6.3E-55 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 Gene3D G3DSA:2.40.170.20 620 992 6.3E-55 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 Pfam PF00593 TonB dependent receptor 698 992 2.8E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 233 2.5E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 SUPERFAMILY SSF56935 348 472 4.97E-77 T 11-11-2016 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 SUPERFAMILY SSF56935 754 992 4.97E-77 T 11-11-2016 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 SUPERFAMILY SSF56935 612 727 4.97E-77 T 11-11-2016 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 SUPERFAMILY SSF56935 505 568 4.97E-77 T 11-11-2016 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 SUPERFAMILY SSF56935 88 307 4.97E-77 T 11-11-2016 ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 96 992 8.7E-210 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS04340 90caacdea2015aa11202ef67f564c320 995 Gene3D G3DSA:2.170.130.10 115 236 1.1E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06605 b8b8c79fb2a6b80b3f2c121dcd09e1f0 403 SUPERFAMILY SSF53098 232 367 3.34E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06605 b8b8c79fb2a6b80b3f2c121dcd09e1f0 403 SUPERFAMILY SSF53098 20 203 3.34E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06605 b8b8c79fb2a6b80b3f2c121dcd09e1f0 403 Pfam PF13546 DDE superfamily endonuclease 1 255 1.7E-84 T 11-11-2016 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 162 1.4E-50 T 11-11-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 SUPERFAMILY SSF48179 182 335 2.38E-50 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 321 4.2E-46 T 11-11-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 Gene3D G3DSA:3.40.50.720 3 190 8.1E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 SUPERFAMILY SSF51735 5 183 1.08E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 325 38.561 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 Gene3D G3DSA:1.10.1040.10 192 335 2.2E-50 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 6.9E-42 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 6.9E-42 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 6.9E-42 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 6.9E-42 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 6.9E-42 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 6.9E-42 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21140 d4c1907e1ce0428645e25ff618ad2f4a 341 PIRSF PIRSF000114 1 335 5.2E-98 T 11-11-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SMART SM00260 521 653 1.3E-24 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SUPERFAMILY SSF55874 345 527 2.36E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SUPERFAMILY SSF47226 2 128 3.4E-29 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Pfam PF01627 Hpt domain 5 98 1.4E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 528 7.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 284 342 3.9E-8 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Gene3D G3DSA:1.10.287.560 284 344 2.5E-13 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SMART SM01231 283 343 3.8E-13 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SMART SM00387 388 529 3.9E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SMART SM00073 3 100 5.8E-25 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 2.2E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Gene3D G3DSA:2.30.30.40 529 550 1.4E-18 T 11-11-2016 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Gene3D G3DSA:2.30.30.40 609 653 1.4E-18 T 11-11-2016 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Gene3D G3DSA:1.20.120.160 1 134 1.9E-36 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Gene3D G3DSA:3.30.565.10 345 528 3.9E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Gene3D G3DSA:2.40.50.180 564 608 1.8E-11 T 11-11-2016 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 Pfam PF01584 CheW-like domain 535 655 5.8E-22 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SUPERFAMILY SSF47384 284 344 1.45E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07270 68b77b6b68038d5871c2e6261912b93f 665 SUPERFAMILY SSF50341 528 653 3.53E-28 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS05470 b20325dfbc42600467689294cdbeab3a 281 Pfam PF13371 Tetratricopeptide repeat 199 270 4.4E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS05470 b20325dfbc42600467689294cdbeab3a 281 Gene3D G3DSA:1.25.40.10 192 265 2.6E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS05470 b20325dfbc42600467689294cdbeab3a 281 SUPERFAMILY SSF48452 192 266 8.02E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS05470 b20325dfbc42600467689294cdbeab3a 281 Pfam PF13369 Transglutaminase-like superfamily 48 197 1.0E-44 T 11-11-2016 IPR032698 Protein SirB1, N-terminal ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 SUPERFAMILY SSF101904 501 743 6.54E-46 T 11-11-2016 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Gene3D G3DSA:3.30.1360.40 242 335 1.1E-23 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 SMART SM00434 15 465 5.4E-220 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Gene3D G3DSA:3.90.199.10 35 241 2.0E-102 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Gene3D G3DSA:3.90.199.10 337 402 2.0E-102 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 649 698 8.3E-6 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 602 639 0.094 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 SUPERFAMILY SSF56719 35 487 3.53E-151 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 8 745 33.711 T 11-11-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 13 743 0.0 T 11-11-2016 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Gene3D G3DSA:2.120.10.90 500 709 1.8E-26 T 11-11-2016 ATY42_RS09705 7ed82e1ffb673f0060efb0512772d0d1 747 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 8.3E-133 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SUPERFAMILY SSF158472 218 267 2.48E-9 T 11-11-2016 ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SMART SM00267 266 442 2.6E-53 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Gene3D G3DSA:3.30.450.20 53 172 9.8E-4 T 11-11-2016 ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Pfam PF00990 Diguanylate cyclase, GGDEF domain 277 437 1.9E-42 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Gene3D G3DSA:3.30.70.270 278 448 7.6E-51 T 11-11-2016 ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Gene3D G3DSA:3.20.20.450 455 703 9.1E-95 T 11-11-2016 IPR001633 EAL domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 274 438 7.7E-36 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SUPERFAMILY SSF141868 457 702 2.09E-87 T 11-11-2016 IPR001633 EAL domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SUPERFAMILY SSF103190 79 173 2.0E-5 T 11-11-2016 IPR029151 Periplasmic sensor domain-like ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SMART SM00052 452 697 2.6E-112 T 11-11-2016 IPR001633 EAL domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Pfam PF00672 HAMP domain 198 267 2.1E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SUPERFAMILY SSF55073 282 443 2.35E-44 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Pfam PF00563 EAL domain 459 692 3.5E-71 T 11-11-2016 IPR001633 EAL domain ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 Pfam PF17203 Single cache domain 3 54 172 6.7E-10 T 11-11-2016 IPR033463 Single cache domain 3 ATY42_RS13395 2afa9fcbe5b4fc3f906c15cd774a3a09 705 SMART SM00304 218 271 1.4E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS20265 8209ce4e7e8b6124c9cf9c3574b3839d 458 Pfam PF00324 Amino acid permease 18 457 1.1E-112 T 11-11-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 ATY42_RS20265 8209ce4e7e8b6124c9cf9c3574b3839d 458 PIRSF PIRSF006060 1 456 2.0E-70 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS20265 8209ce4e7e8b6124c9cf9c3574b3839d 458 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 11-11-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATY42_RS12260 efd5e257fda289862453e5fceb3c5eda 353 Pfam PF05598 Transposase domain (DUF772) 44 118 1.8E-22 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS12260 efd5e257fda289862453e5fceb3c5eda 353 Pfam PF01609 Transposase DDE domain 160 336 4.3E-6 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22865 1178167be6ce89efaaffbc9237489e60 233 SUPERFAMILY SSF53067 102 226 2.92E-15 T 11-11-2016 ATY42_RS22865 1178167be6ce89efaaffbc9237489e60 233 Gene3D G3DSA:3.30.420.40 101 230 6.2E-18 T 11-11-2016 ATY42_RS22865 1178167be6ce89efaaffbc9237489e60 233 Pfam PF00480 ROK family 106 232 1.8E-5 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATY42_RS22865 1178167be6ce89efaaffbc9237489e60 233 Gene3D G3DSA:1.10.10.10 41 100 1.1E-10 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22865 1178167be6ce89efaaffbc9237489e60 233 SUPERFAMILY SSF46785 42 99 2.91E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS19580 8152117a34f01789d139c8fd0e94b7bb 157 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 140 3.3E-34 T 11-11-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 14 130 2.8E-35 T 11-11-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 Gene3D G3DSA:3.40.192.10 16 149 2.1E-45 T 11-11-2016 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 133 291 2.9E-63 T 11-11-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 119 140 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 43 65 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 267 285 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 215 244 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 84 111 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 250 266 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 164 184 2.6E-81 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 SUPERFAMILY SSF53223 12 131 1.44E-36 T 11-11-2016 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 271 279 - T 11-11-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 Hamap MF_01576 Bifunctional protein FolD [folD]. 12 294 36.897 T 11-11-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 Gene3D G3DSA:3.40.50.720 150 275 1.4E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10690 6682eef3822d8ee9706f668d5fabf821 303 SUPERFAMILY SSF51735 132 290 7.79E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 Pfam PF00854 POT family 103 459 2.7E-54 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 160 172 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 Gene3D G3DSA:1.20.1250.20 27 217 4.2E-15 T 11-11-2016 ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 Gene3D G3DSA:1.20.1250.20 294 492 3.5E-6 T 11-11-2016 ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 SUPERFAMILY SSF103473 237 497 2.62E-10 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 21 498 3.0E-102 T 11-11-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 ATY42_RS20495 12ac0b9820335c0be5f60a954256a139 502 SUPERFAMILY SSF103473 14 216 8.5E-22 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 Gene3D G3DSA:1.10.287.950 428 646 2.0E-52 T 11-11-2016 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 479 674 1.8E-48 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 435 464 6.3E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 6.3E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 539 6.3E-19 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 SUPERFAMILY SSF58104 376 676 8.72E-69 T 11-11-2016 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 SMART SM00283 414 675 4.5E-86 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS08475 ae30154efa74226812d7129863eebce1 678 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 40 135 1.7E-5 T 11-11-2016 IPR029095 NarX-like, N-terminal ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 79 327 1.1E-38 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 Gene3D G3DSA:3.40.50.1700 353 614 8.9E-66 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 Pfam PF14310 Fibronectin type III-like domain 645 711 7.8E-13 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 362 611 7.3E-56 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 186 202 6.8E-27 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 109 128 6.8E-27 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 79 95 6.8E-27 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 256 274 6.8E-27 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 PRINTS PR00133 Glycosyl hydrolase family 3 signature 155 171 6.8E-27 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 SMART SM01217 644 712 1.2E-15 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 Gene3D G3DSA:3.20.20.300 21 340 9.4E-92 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 SUPERFAMILY SSF51445 22 345 4.74E-84 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 SUPERFAMILY SSF52279 362 561 4.32E-51 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS11680 02a0e35a38b77e76294635be97a025db 729 SUPERFAMILY SSF52279 592 614 4.32E-51 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 Gene3D G3DSA:1.10.287.90 29 112 4.7E-36 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 PIRSF PIRSF000292 4 308 3.7E-131 T 11-11-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 17 238 6.1E-116 T 11-11-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 148 220 6.3E-7 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 Gene3D G3DSA:2.60.40.420 114 281 5.7E-40 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 SUPERFAMILY SSF49503 119 283 2.84E-48 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 SUPERFAMILY SSF81464 30 117 4.09E-23 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08020 cb22a83d9c4faced87fd0de5ac2723f2 311 Pfam PF06481 COX Aromatic Rich Motif 238 285 8.8E-16 T 11-11-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Gene3D G3DSA:3.40.120.10 5 120 2.1E-33 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 151 250 3.1E-22 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 91 100 - T 11-11-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 365 2.7E-24 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Gene3D G3DSA:3.30.310.50 367 447 8.1E-17 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 SUPERFAMILY SSF53738 4 174 1.02E-34 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.2E-28 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.2E-28 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.2E-28 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 90 104 2.2E-28 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 SUPERFAMILY SSF55957 364 447 4.53E-19 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 SUPERFAMILY SSF53738 255 359 3.92E-31 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 131 2.3E-34 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 SUPERFAMILY SSF53738 151 253 4.71E-28 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 370 446 1.1E-10 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Gene3D G3DSA:3.40.120.10 169 246 7.2E-28 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS03850 f7ef67501af1550c7d7fb3dab590b31c 448 Gene3D G3DSA:3.40.120.10 247 360 3.2E-38 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS08760 9d19772680061e724954a580008d8857 824 Pfam PF09317 Domain of unknown function (DUF1974) 518 801 1.4E-108 T 11-11-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 ATY42_RS08760 9d19772680061e724954a580008d8857 824 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 141 236 6.3E-16 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS08760 9d19772680061e724954a580008d8857 824 SUPERFAMILY SSF56645 123 359 1.7E-40 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ATY42_RS08760 9d19772680061e724954a580008d8857 824 Gene3D G3DSA:2.40.110.10 241 350 8.2E-14 T 11-11-2016 ATY42_RS08760 9d19772680061e724954a580008d8857 824 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 364 509 3.6E-17 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS08760 9d19772680061e724954a580008d8857 824 SUPERFAMILY SSF47203 364 510 1.34E-25 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS08760 9d19772680061e724954a580008d8857 824 Gene3D G3DSA:1.20.140.10 351 511 3.0E-28 T 11-11-2016 ATY42_RS08760 9d19772680061e724954a580008d8857 824 Gene3D G3DSA:1.10.540.10 101 236 2.7E-30 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS19280 cb2bcf7865375fea4e83f126a954dadc 622 Gene3D G3DSA:3.40.710.10 232 551 1.1E-89 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS19280 cb2bcf7865375fea4e83f126a954dadc 622 SUPERFAMILY SSF56601 177 572 2.39E-95 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS19280 cb2bcf7865375fea4e83f126a954dadc 622 SUPERFAMILY SSF56519 57 224 5.76E-47 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ATY42_RS19280 cb2bcf7865375fea4e83f126a954dadc 622 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 209 7.3E-20 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ATY42_RS19280 cb2bcf7865375fea4e83f126a954dadc 622 Gene3D G3DSA:3.90.1310.10 132 231 1.5E-30 T 11-11-2016 ATY42_RS19280 cb2bcf7865375fea4e83f126a954dadc 622 Pfam PF00905 Penicillin binding protein transpeptidase domain 250 546 1.3E-79 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATY42_RS00925 6fee0eaf8629789e6fc15acdfc737340 661 Pfam PF07555 beta-N-acetylglucosaminidase 183 493 1.6E-101 T 11-11-2016 IPR011496 Beta-N-acetylglucosaminidase MetaCyc: PWY-7437 ATY42_RS00925 6fee0eaf8629789e6fc15acdfc737340 661 SUPERFAMILY SSF55545 33 178 3.53E-24 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS00925 6fee0eaf8629789e6fc15acdfc737340 661 Gene3D G3DSA:3.20.20.80 168 233 1.3E-5 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00925 6fee0eaf8629789e6fc15acdfc737340 661 SUPERFAMILY SSF51445 180 509 5.05E-99 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00925 6fee0eaf8629789e6fc15acdfc737340 661 Gene3D G3DSA:3.30.379.10 22 167 2.0E-22 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS00925 6fee0eaf8629789e6fc15acdfc737340 661 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 36 177 2.0E-20 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 ATY42_RS13255 adb8ace4d2953d8cb4b10a1d965a274a 145 Gene3D G3DSA:3.90.1010.10 9 143 5.6E-51 T 11-11-2016 ATY42_RS13255 adb8ace4d2953d8cb4b10a1d965a274a 145 Pfam PF02657 Fe-S metabolism associated domain 21 138 6.4E-43 T 11-11-2016 IPR003808 Fe-S metabolism associated domain, SufE-like ATY42_RS13255 adb8ace4d2953d8cb4b10a1d965a274a 145 SUPERFAMILY SSF82649 15 143 2.14E-42 T 11-11-2016 ATY42_RS20045 d82aea9ebf4ed5d3767a96557a46b4f0 183 SUPERFAMILY SSF56235 9 182 5.5E-53 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS20045 d82aea9ebf4ed5d3767a96557a46b4f0 183 Gene3D G3DSA:3.60.20.10 13 183 2.1E-78 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS20045 d82aea9ebf4ed5d3767a96557a46b4f0 183 Pfam PF00227 Proteasome subunit 10 181 1.6E-20 T 11-11-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5687128|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-983168 ATY42_RS20045 d82aea9ebf4ed5d3767a96557a46b4f0 183 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 13 183 1.4E-81 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ATY42_RS20045 d82aea9ebf4ed5d3767a96557a46b4f0 183 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 12 183 40.903 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ATY42_RS20045 d82aea9ebf4ed5d3767a96557a46b4f0 183 PIRSF PIRSF039093 6 183 1.7E-81 T 11-11-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 Gene3D G3DSA:3.40.190.10 180 266 8.7E-20 T 11-11-2016 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 Gene3D G3DSA:3.40.190.10 94 179 2.2E-21 T 11-11-2016 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 7.3E-23 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 SUPERFAMILY SSF46785 4 115 1.84E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 Pfam PF03466 LysR substrate binding domain 93 294 2.2E-41 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 Gene3D G3DSA:1.10.10.10 5 88 2.2E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05385 e5cf374230d0cc007cb9ac2ba3a761f8 300 SUPERFAMILY SSF53850 95 297 4.62E-41 T 11-11-2016 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Gene3D G3DSA:3.40.50.2300 1024 1145 3.2E-20 T 11-11-2016 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Gene3D G3DSA:3.30.565.10 854 1003 1.2E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SUPERFAMILY SSF47384 768 850 1.47E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Gene3D G3DSA:1.10.287.130 776 845 5.5E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SMART SM00448 1029 1140 6.4E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SUPERFAMILY SSF55785 628 750 3.32E-11 T 11-11-2016 IPR000014 PAS domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SMART SM00091 637 706 0.0028 T 11-11-2016 IPR000014 PAS domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SMART SM00388 783 849 1.4E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SUPERFAMILY SSF55874 839 1002 1.96E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Pfam PF00072 Response regulator receiver domain 1031 1138 8.3E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Pfam PF00512 His Kinase A (phospho-acceptor) domain 783 849 1.4E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Pfam PF12860 PAS fold 643 757 9.0E-44 T 11-11-2016 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Gene3D G3DSA:3.30.450.20 628 751 5.6E-15 T 11-11-2016 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 1001 7.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SMART SM00387 893 1004 1.1E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 636 759 1.0E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 SUPERFAMILY SSF52172 1028 1145 1.57E-19 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 988 1001 7.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 947 957 7.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 929 943 7.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS01530 2f176185513e43f426eb6fe863ffbae0 1149 PRINTS PR00344 Bacterial sensor protein C-terminal signature 964 982 7.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17740 b6a39ca8b51883282e259500f172b727 224 Gene3D G3DSA:1.10.1670.10 158 212 1.4E-17 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATY42_RS17740 b6a39ca8b51883282e259500f172b727 224 Gene3D G3DSA:1.10.340.30 48 157 3.3E-22 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS17740 b6a39ca8b51883282e259500f172b727 224 SUPERFAMILY SSF48150 38 208 6.11E-36 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS17740 b6a39ca8b51883282e259500f172b727 224 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 193 9.6E-12 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS17740 b6a39ca8b51883282e259500f172b727 224 SMART SM00478 55 210 1.6E-10 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS12745 ee552c2926ca788cd6889b265f58fc35 135 Pfam PF00460 Flagella basal body rod protein 7 36 7.5E-9 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATY42_RS12745 ee552c2926ca788cd6889b265f58fc35 135 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site ATY42_RS12745 ee552c2926ca788cd6889b265f58fc35 135 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 6 135 9.4E-44 T 11-11-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 ATY42_RS12745 ee552c2926ca788cd6889b265f58fc35 135 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 88 131 5.1E-10 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATY42_RS05275 e300c4f1093ce6fca82c3e08315e3293 223 Gene3D G3DSA:3.40.50.150 22 201 4.5E-18 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS05275 e300c4f1093ce6fca82c3e08315e3293 223 SUPERFAMILY SSF53335 22 202 8.37E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS05275 e300c4f1093ce6fca82c3e08315e3293 223 Pfam PF08242 Methyltransferase domain 53 149 1.7E-14 T 11-11-2016 IPR013217 Methyltransferase type 12 ATY42_RS13895 eea64f43b62ddffe1b6a5e6afd51ab7d 434 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 288 1.4E-13 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS13895 eea64f43b62ddffe1b6a5e6afd51ab7d 434 Gene3D G3DSA:2.40.50.100 167 201 4.3E-21 T 11-11-2016 ATY42_RS13895 eea64f43b62ddffe1b6a5e6afd51ab7d 434 Gene3D G3DSA:2.40.50.100 59 92 4.3E-21 T 11-11-2016 ATY42_RS13895 eea64f43b62ddffe1b6a5e6afd51ab7d 434 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 366 7.1E-76 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS13895 eea64f43b62ddffe1b6a5e6afd51ab7d 434 SUPERFAMILY SSF111369 47 291 2.88E-69 T 11-11-2016 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 361 4.4E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 Pfam PF00072 Response regulator receiver domain 13 122 4.0E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 Pfam PF00072 Response regulator receiver domain 383 459 3.9E-5 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 Gene3D G3DSA:3.40.50.2300 376 498 2.0E-13 T 11-11-2016 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SUPERFAMILY SSF52172 10 143 1.39E-26 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SUPERFAMILY SSF47384 145 213 4.9E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SUPERFAMILY SSF52172 379 498 3.98E-15 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 2.6E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 323 341 2.6E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 360 2.6E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 2.6E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SMART SM00388 150 215 4.0E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SMART SM00448 11 122 8.9E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SMART SM00448 381 493 0.011 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 Gene3D G3DSA:3.40.50.2300 10 141 7.5E-24 T 11-11-2016 ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SMART SM00387 256 363 2.8E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 Gene3D G3DSA:3.30.565.10 217 361 8.8E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19795 6d90b323dca4e535b0955933f64ee1bb 500 SUPERFAMILY SSF55874 206 362 1.44E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05990 8733e2ea4073003045c029bfe828b0b7 149 SUPERFAMILY SSF49503 23 146 3.07E-42 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS05990 8733e2ea4073003045c029bfe828b0b7 149 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 126 142 - T 11-11-2016 IPR028871 Blue (type 1) copper protein, binding site ATY42_RS05990 8733e2ea4073003045c029bfe828b0b7 149 TIGRFAM TIGR02695 azurin: azurin 24 147 7.5E-58 T 11-11-2016 IPR014068 Azurin, proteobacteria ATY42_RS05990 8733e2ea4073003045c029bfe828b0b7 149 Gene3D G3DSA:2.60.40.420 23 147 7.0E-52 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS05990 8733e2ea4073003045c029bfe828b0b7 149 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 3.7E-19 T 11-11-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 ATY42_RS05990 8733e2ea4073003045c029bfe828b0b7 149 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 26 149 2.0E-68 T 11-11-2016 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Pfam PF10396 GTP-binding protein TrmE N-terminus 7 120 1.3E-36 T 11-11-2016 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Gene3D G3DSA:3.40.50.300 218 246 1.4E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Gene3D G3DSA:1.20.120.430 377 446 1.3E-49 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Gene3D G3DSA:1.20.120.430 122 182 1.3E-49 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Gene3D G3DSA:1.20.120.430 247 271 1.3E-49 T 11-11-2016 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 219 239 7.4E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 283 7.4E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Pfam PF12631 MnmE helical domain 123 443 9.0E-49 T 11-11-2016 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Pfam PF01926 50S ribosome-binding GTPase 219 310 6.7E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 6 446 31.341 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 SUPERFAMILY SSF52540 188 360 6.37E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 SUPERFAMILY SSF52540 72 152 6.37E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Gene3D G3DSA:3.40.50.300 286 366 7.4E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 Gene3D G3DSA:3.30.1360.120 3 121 7.0E-42 T 11-11-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 14 446 1.1E-95 T 11-11-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ATY42_RS23280 0631e9e65bb2d5f744009bd8a8207b0c 446 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 220 336 1.8E-21 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 510 613 3.6E-26 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 22 532 4.0E-92 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 Gene3D G3DSA:2.40.50.230 382 478 2.9E-28 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 30 533 2.5E-78 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 SUPERFAMILY SSF69255 376 478 6.54E-23 T 11-11-2016 ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 Gene3D G3DSA:3.55.50.10 106 201 1.3E-22 T 11-11-2016 ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 Pfam PF05954 Phage late control gene D protein (GPD) 37 338 1.2E-75 T 11-11-2016 ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 663 812 6.8E-44 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 SUPERFAMILY SSF69279 204 376 9.52E-17 T 11-11-2016 ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 SUPERFAMILY SSF69279 20 197 1.64E-47 T 11-11-2016 ATY42_RS19935 7417e28500cadb7cf8eda6083783d488 812 SUPERFAMILY SSF69349 684 810 2.59E-5 T 11-11-2016 ATY42_RS10490 8f748705add68b6c12231746bb8cee76 382 Gene3D G3DSA:3.40.640.10 39 268 1.2E-75 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS10490 8f748705add68b6c12231746bb8cee76 382 Gene3D G3DSA:3.90.1150.10 269 381 3.4E-15 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS10490 8f748705add68b6c12231746bb8cee76 382 SUPERFAMILY SSF53383 2 381 1.86E-99 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS10490 8f748705add68b6c12231746bb8cee76 382 Pfam PF00155 Aminotransferase class I and II 28 379 5.2E-58 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 Pfam PF01966 HD domain 202 319 4.8E-19 T 11-11-2016 IPR006674 HD domain ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 SMART SM00471 192 329 2.2E-6 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 SUPERFAMILY SSF52172 27 176 5.12E-36 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 Pfam PF00072 Response regulator receiver domain 30 142 8.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 Gene3D G3DSA:1.10.3210.10 196 359 5.5E-23 T 11-11-2016 IPR006674 HD domain ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 SMART SM00448 28 143 5.2E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 SUPERFAMILY SSF109604 170 356 2.04E-41 T 11-11-2016 ATY42_RS14340 af137d93e30174a14720d069bd1f34d6 378 Gene3D G3DSA:3.40.50.2300 26 185 1.3E-34 T 11-11-2016 ATY42_RS06385 24cd3f0718b20440fec987e1ef4db3eb 233 Pfam PF00308 Bacterial dnaA protein 18 208 3.3E-5 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA ATY42_RS06385 24cd3f0718b20440fec987e1ef4db3eb 233 SUPERFAMILY SSF52540 13 209 5.07E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06385 24cd3f0718b20440fec987e1ef4db3eb 233 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 5 229 2.6E-70 T 11-11-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 ATY42_RS06385 24cd3f0718b20440fec987e1ef4db3eb 233 Gene3D G3DSA:3.40.50.300 4 156 2.0E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06385 24cd3f0718b20440fec987e1ef4db3eb 233 Gene3D G3DSA:1.10.8.60 164 229 2.7E-23 T 11-11-2016 ATY42_RS16600 2ce1457def3af585620fc51e8c0318cd 1306 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 10 1286 0.0 T 11-11-2016 IPR011836 Conserved hypothetical protein CHP02099 ATY42_RS16600 2ce1457def3af585620fc51e8c0318cd 1306 Pfam PF13502 AsmA-like C-terminal region 1034 1275 1.8E-59 T 11-11-2016 IPR032712 AsmA-like, C-terminal ATY42_RS16600 2ce1457def3af585620fc51e8c0318cd 1306 Pfam PF13116 Protein of unknown function 508 780 2.4E-42 T 11-11-2016 IPR025263 Domain of unknown function DUF3971 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 SUPERFAMILY SSF52096 10 304 5.53E-66 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Gene3D G3DSA:3.40.50.720 310 497 2.3E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 586 1.3E-15 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 SUPERFAMILY SSF51735 316 495 4.6E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Gene3D G3DSA:3.90.226.10 10 211 5.4E-62 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 SUPERFAMILY SSF48179 603 681 5.36E-17 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 319 491 7.2E-46 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Gene3D G3DSA:1.10.1040.10 612 681 8.0E-12 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 207 1.5E-35 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 Gene3D G3DSA:1.10.1040.10 498 587 2.1E-19 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS08955 62e8e36dec9eedff9bbfe14977592ff7 693 SUPERFAMILY SSF48179 495 595 7.14E-22 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 SUPERFAMILY SSF52518 118 548 1.02E-85 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 SMART SM00861 594 787 3.0E-53 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 932 1.0E-51 T 11-11-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 SUPERFAMILY SSF52518 577 794 9.25E-53 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 Gene3D G3DSA:3.40.50.970 596 791 1.0E-24 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 PIRSF PIRSF000157 2 934 0.0 T 11-11-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 11 49 1.2E-15 T 11-11-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 Gene3D G3DSA:3.40.50.970 157 518 3.1E-73 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 Pfam PF02779 Transketolase, pyrimidine binding domain 595 788 8.2E-63 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS09920 e1e565929c05026c51ab4731df81b61d 942 Pfam PF00676 Dehydrogenase E1 component 209 516 3.2E-52 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 263 269 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 Pfam PF12161 HsdM N-terminal domain 7 113 2.5E-9 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 Gene3D G3DSA:3.40.50.150 149 378 3.0E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 Pfam PF02384 N-6 DNA Methylase 124 416 2.0E-71 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 147 163 6.3E-19 T 11-11-2016 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 289 313 6.3E-19 T 11-11-2016 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 171 185 6.3E-19 T 11-11-2016 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 260 272 6.3E-19 T 11-11-2016 ATY42_RS17405 ce3a9f617164e6295cc536d1b314835a 514 SUPERFAMILY SSF53335 4 491 5.56E-121 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12595 b687134959ac60a939716831453d86c5 132 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 16.516 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATY42_RS12595 b687134959ac60a939716831453d86c5 132 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 4.1E-18 T 11-11-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 SUPERFAMILY SSF50615 12 96 1.06E-25 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Gene3D G3DSA:2.40.30.20 4 95 1.1E-29 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 5 512 6.0E-248 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Gene3D G3DSA:3.40.50.300 96 384 5.4E-115 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 94 2.2E-11 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 509 3.7E-45 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 3 514 49.925 T 11-11-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 377 6.1E-73 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 Gene3D G3DSA:1.20.150.20 385 511 1.0E-48 T 11-11-2016 ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 SUPERFAMILY SSF52540 98 383 1.95E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03520 848ae7410aad19528affa3c83227faa2 515 SUPERFAMILY SSF47917 385 512 1.36E-46 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS09015 ba1afad7bfb8930983a6a56c906237f4 165 SUPERFAMILY SSF55154 1 155 3.6E-41 T 11-11-2016 IPR033469 CYTH-like domain Reactome: R-HSA-196819 ATY42_RS09015 ba1afad7bfb8930983a6a56c906237f4 165 SMART SM01118 2 155 2.9E-20 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 ATY42_RS09015 ba1afad7bfb8930983a6a56c906237f4 165 Gene3D G3DSA:2.40.320.10 1 158 8.3E-53 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 ATY42_RS09015 ba1afad7bfb8930983a6a56c906237f4 165 Pfam PF01928 CYTH domain 4 143 1.2E-15 T 11-11-2016 IPR023577 CYTH domain Reactome: R-HSA-196819 ATY42_RS09015 ba1afad7bfb8930983a6a56c906237f4 165 PIRSF PIRSF016487 1 165 2.2E-62 T 11-11-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 266 430 9.5E-50 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 SUPERFAMILY SSF55073 275 430 2.12E-47 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 Gene3D G3DSA:3.40.50.2300 137 258 3.4E-28 T 11-11-2016 ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 SUPERFAMILY SSF52172 140 271 1.57E-29 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 SMART SM00448 139 253 8.3E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 SMART SM00448 17 133 0.022 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 SUPERFAMILY SSF52172 17 138 4.69E-12 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 Pfam PF00072 Response regulator receiver domain 142 250 2.1E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 Pfam PF00990 Diguanylate cyclase, GGDEF domain 270 427 1.5E-43 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 Gene3D G3DSA:3.30.70.270 272 430 1.4E-51 T 11-11-2016 ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 SMART SM00267 259 431 3.1E-54 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13815 e7c1f3a35903b43c04ff3b64c03c6b34 432 Gene3D G3DSA:3.40.50.2300 17 135 7.2E-11 T 11-11-2016 ATY42_RS09965 110503e4e214686bc2bff46ab28f6bad 322 Pfam PF13592 Winged helix-turn helix 102 161 5.3E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS09965 110503e4e214686bc2bff46ab28f6bad 322 SUPERFAMILY SSF46689 18 136 6.63E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS09965 110503e4e214686bc2bff46ab28f6bad 322 Pfam PF13358 DDE superfamily endonuclease 178 297 1.1E-26 T 11-11-2016 ATY42_RS09965 110503e4e214686bc2bff46ab28f6bad 322 Pfam PF13551 Winged helix-turn helix 25 84 3.7E-14 T 11-11-2016 ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 Pfam PF04542 Sigma-70 region 2 17 81 2.1E-15 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 Pfam PF08281 Sigma-70, region 4 106 158 2.3E-12 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 Gene3D G3DSA:1.10.10.10 100 164 4.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 SUPERFAMILY SSF88946 15 91 7.06E-18 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 Gene3D G3DSA:1.10.1740.10 18 99 3.2E-17 T 11-11-2016 ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 SUPERFAMILY SSF88659 99 163 4.14E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS11635 7af39f1fe979d750be402d677fb2cc64 166 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 160 1.8E-22 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS07370 10b9b19f5caab8f23e1aa62dc865c885 245 SUPERFAMILY SSF56317 15 227 1.44E-38 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS07370 10b9b19f5caab8f23e1aa62dc865c885 245 Gene3D G3DSA:3.60.110.10 14 227 9.0E-38 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS07370 10b9b19f5caab8f23e1aa62dc865c885 245 Pfam PF00795 Carbon-nitrogen hydrolase 17 164 1.3E-13 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS19540 63d12da1a406f607c27f67711a78eb10 456 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 56 359 2.4E-95 T 11-11-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATY42_RS19540 63d12da1a406f607c27f67711a78eb10 456 PIRSF PIRSF017901 3 456 1.4E-185 T 11-11-2016 ATY42_RS19540 63d12da1a406f607c27f67711a78eb10 456 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 13 456 3.3E-211 T 11-11-2016 IPR011556 Glutamate--cysteine ligase, plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 ATY42_RS19540 63d12da1a406f607c27f67711a78eb10 456 SUPERFAMILY SSF55931 310 454 5.3E-70 T 11-11-2016 ATY42_RS19540 63d12da1a406f607c27f67711a78eb10 456 SUPERFAMILY SSF55931 28 271 5.3E-70 T 11-11-2016 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 PRINTS PR00046 Major sigma-70 factor signature 222 233 2.3E-11 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 PRINTS PR00046 Major sigma-70 factor signature 190 202 2.3E-11 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 PRINTS PR00046 Major sigma-70 factor signature 207 222 2.3E-11 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 PRINTS PR00046 Major sigma-70 factor signature 47 60 2.3E-11 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Pfam PF04545 Sigma-70, region 4 186 234 1.7E-17 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 236 1.1E-33 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 207 233 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 PIRSF PIRSF000770 1 242 3.1E-40 T 11-11-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 21 238 8.1E-81 T 11-11-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 6 240 64.602 T 11-11-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 SUPERFAMILY SSF88946 17 92 4.19E-24 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Pfam PF04539 Sigma-70 region 3 103 173 8.0E-13 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Gene3D G3DSA:1.10.10.10 174 238 4.5E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 SUPERFAMILY SSF88659 166 237 1.03E-19 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Pfam PF04542 Sigma-70 region 2 21 92 3.3E-17 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Gene3D G3DSA:1.10.601.10 18 87 3.8E-15 T 11-11-2016 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 SUPERFAMILY SSF88659 93 159 2.75E-11 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12995 5dbbc1a9cf8628a8d1272a6e371e19eb 251 Gene3D G3DSA:1.10.10.10 92 140 3.1E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04205 ded9ec89025191b53b57c9ed0cefe5d3 224 TIGRFAM TIGR01876 cas_Cas5d: CRISPR-associated protein Cas5, subtype I-C/DVULG 7 222 4.0E-52 T 11-11-2016 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 ATY42_RS04205 ded9ec89025191b53b57c9ed0cefe5d3 224 PIRSF PIRSF029950 1 224 6.6E-95 T 11-11-2016 IPR010155 CRISPR pre-crRNA endoribonuclease Cas5d GO:0004519|GO:0051607 ATY42_RS04205 ded9ec89025191b53b57c9ed0cefe5d3 224 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 5 214 1.0E-44 T 11-11-2016 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 ATY42_RS04205 ded9ec89025191b53b57c9ed0cefe5d3 224 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 5 46 9.3E-16 T 11-11-2016 IPR013422 CRISPR-associated protein Cas5, N-terminal ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 135 4.1E-34 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 SUPERFAMILY SSF50129 1 173 4.72E-57 T 11-11-2016 IPR011032 GroES-like ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 339 4.8E-147 T 11-11-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 SUPERFAMILY SSF51735 141 304 3.23E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 Pfam PF00107 Zinc-binding dehydrogenase 174 301 6.9E-29 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 SMART SM00829 8 337 3.7E-4 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 339 58.259 T 11-11-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 Gene3D G3DSA:3.90.180.10 1 172 5.5E-52 T 11-11-2016 IPR011032 GroES-like ATY42_RS18560 095e29c517d43e428b906cd2d42c2516 340 Gene3D G3DSA:3.40.50.720 173 286 1.2E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08035 eea8bcee430cbd82268ca427f1a73cdd 111 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 110 8.6E-38 T 11-11-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 ATY42_RS08035 eea8bcee430cbd82268ca427f1a73cdd 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 22 95 7.5E-15 T 11-11-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 Hamap MF_00015 LexA repressor [lexA]. 3 201 28.192 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 Pfam PF01726 LexA DNA binding domain 1 64 1.1E-13 T 11-11-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 Gene3D G3DSA:1.10.10.10 1 68 3.2E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 114 124 2.3E-10 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 136 2.3E-10 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 153 165 2.3E-10 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 Gene3D G3DSA:2.10.109.10 78 200 1.4E-38 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 TIGRFAM TIGR00498 lexA: repressor LexA 1 200 1.3E-52 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 SUPERFAMILY SSF51306 78 199 6.63E-33 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 SUPERFAMILY SSF46785 3 68 5.93E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS17280 07bca2554c9bd8c0907d832e572ddfd3 201 Pfam PF00717 Peptidase S24-like 117 182 2.4E-15 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B ATY42_RS16195 bb302448c23025d9beace3e8d81492a8 500 Pfam PF00361 Proton-conducting membrane transporter 128 428 4.8E-78 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16195 bb302448c23025d9beace3e8d81492a8 500 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 494 2.1E-195 T 11-11-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16195 bb302448c23025d9beace3e8d81492a8 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.9E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16195 bb302448c23025d9beace3e8d81492a8 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 5.9E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16195 bb302448c23025d9beace3e8d81492a8 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 385 411 5.9E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16195 bb302448c23025d9beace3e8d81492a8 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 5.9E-40 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 PIRSF PIRSF005261 1 286 1.3E-98 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 Gene3D G3DSA:3.55.30.10 1 177 1.0E-52 T 11-11-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 SUPERFAMILY SSF64397 4 233 1.44E-58 T 11-11-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 Gene3D G3DSA:1.10.287.480 180 223 3.7E-12 T 11-11-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 Pfam PF01430 Hsp33 protein 5 273 7.9E-77 T 11-11-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 Gene3D G3DSA:3.90.1280.10 225 283 2.2E-21 T 11-11-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ATY42_RS08785 074836c8e0beb081411bdb4ac80eb36b 296 SUPERFAMILY SSF118352 226 282 3.4E-17 T 11-11-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 Pfam PF01795 MraW methylase family 17 315 1.3E-99 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 SUPERFAMILY SSF53335 222 316 2.04E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 SUPERFAMILY SSF53335 18 122 2.04E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 Gene3D G3DSA:1.10.150.170 122 224 4.3E-36 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 18 316 37.362 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 17 315 1.9E-99 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 Gene3D G3DSA:3.40.50.150 225 316 4.3E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 Gene3D G3DSA:3.40.50.150 18 119 4.3E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 PIRSF PIRSF004486 12 317 2.6E-98 T 11-11-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19290 3f96170b919703ee3f39fa82d86bae87 347 SUPERFAMILY SSF81799 123 222 9.68E-34 T 11-11-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 Gene3D G3DSA:3.40.50.2300 143 276 6.5E-24 T 11-11-2016 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 Pfam PF00072 Response regulator receiver domain 16 129 6.6E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 Pfam PF00072 Response regulator receiver domain 143 264 2.7E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 Gene3D G3DSA:3.40.50.2300 14 135 1.5E-20 T 11-11-2016 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 SMART SM00448 14 129 3.8E-9 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 SMART SM00448 141 264 7.7E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 SUPERFAMILY SSF52172 14 134 7.97E-22 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS21580 777dc08785cd25e8cfa76951946184a2 280 SUPERFAMILY SSF52172 143 276 6.12E-23 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS09170 08b08a998a802fd297271a5863e791e0 188 Pfam PF00924 Mechanosensitive ion channel 63 180 4.4E-13 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ATY42_RS09170 08b08a998a802fd297271a5863e791e0 188 Gene3D G3DSA:2.30.30.60 121 175 7.1E-8 T 11-11-2016 ATY42_RS09170 08b08a998a802fd297271a5863e791e0 188 SUPERFAMILY SSF50182 106 179 8.5E-9 T 11-11-2016 IPR010920 LSM domain ATY42_RS01795 42423ccfa13e8445823f084e84cfce96 229 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 81 4.2E-15 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS01795 42423ccfa13e8445823f084e84cfce96 229 SUPERFAMILY SSF47616 78 205 3.55E-35 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS01795 42423ccfa13e8445823f084e84cfce96 229 Pfam PF00043 Glutathione S-transferase, C-terminal domain 135 197 3.4E-12 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal ATY42_RS01795 42423ccfa13e8445823f084e84cfce96 229 Gene3D G3DSA:3.40.30.10 1 83 9.9E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS01795 42423ccfa13e8445823f084e84cfce96 229 SUPERFAMILY SSF52833 1 84 4.49E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS01795 42423ccfa13e8445823f084e84cfce96 229 Gene3D G3DSA:1.20.1050.10 84 201 3.3E-48 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS01180 025def234bbb5118fd7c9b726d4e3117 138 Pfam PF07715 TonB-dependent Receptor Plug Domain 2 87 4.7E-8 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS01180 025def234bbb5118fd7c9b726d4e3117 138 SUPERFAMILY SSF56935 2 137 3.85E-22 T 11-11-2016 ATY42_RS01180 025def234bbb5118fd7c9b726d4e3117 138 Gene3D G3DSA:2.170.130.10 2 98 9.2E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Pfam PF01471 Putative peptidoglycan binding domain 342 397 5.4E-8 T 11-11-2016 IPR002477 Peptidoglycan binding-like ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 24 323 3.2E-112 T 11-11-2016 IPR011970 Lytic murein transglycosylase ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Gene3D G3DSA:1.10.530.10 206 325 4.4E-54 T 11-11-2016 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Gene3D G3DSA:1.10.530.10 68 125 4.4E-54 T 11-11-2016 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Pfam PF01263 Aldose 1-epimerase 455 717 1.5E-39 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 SUPERFAMILY SSF53955 10 326 9.75E-94 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Pfam PF13406 Transglycosylase SLT domain 25 320 7.3E-99 T 11-11-2016 IPR031304 Transglycosylase SLT domain 2 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Gene3D G3DSA:1.10.101.10 333 401 2.3E-9 T 11-11-2016 IPR002477 Peptidoglycan binding-like ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 Gene3D G3DSA:2.70.98.10 441 719 1.0E-74 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 SUPERFAMILY SSF74650 440 717 1.07E-61 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 ATY42_RS01280 826363de043c0880473302ebcaab73e5 720 SUPERFAMILY SSF47090 327 398 8.63E-14 T 11-11-2016 IPR002477 Peptidoglycan binding-like ATY42_RS10170 907849eaf1529d25ed263c959bc3003b 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS10170 907849eaf1529d25ed263c959bc3003b 331 Pfam PF00872 Transposase, Mutator family 2 305 8.1E-96 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS13630 907849eaf1529d25ed263c959bc3003b 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS13630 907849eaf1529d25ed263c959bc3003b 331 Pfam PF00872 Transposase, Mutator family 2 305 8.1E-96 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS12265 907849eaf1529d25ed263c959bc3003b 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS12265 907849eaf1529d25ed263c959bc3003b 331 Pfam PF00872 Transposase, Mutator family 2 305 8.1E-96 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS13600 0cb995037b2ceff614776642c60c5110 133 Gene3D G3DSA:4.10.430.10 83 110 1.2E-6 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ATY42_RS13600 0cb995037b2ceff614776642c60c5110 133 SMART SM00528 78 121 8.2E-18 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ATY42_RS13600 0cb995037b2ceff614776642c60c5110 133 SUPERFAMILY SSF81273 81 111 3.84E-6 T 11-11-2016 ATY42_RS13600 0cb995037b2ceff614776642c60c5110 133 Pfam PF00816 H-NS histone family 17 111 1.8E-17 T 11-11-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 SMART SM00493 3 103 3.4E-32 T 11-11-2016 IPR006171 Toprim domain ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Pfam PF13368 Topoisomerase C-terminal repeat 714 759 2.9E-12 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Pfam PF13368 Topoisomerase C-terminal repeat 594 654 8.4E-14 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Pfam PF13368 Topoisomerase C-terminal repeat 657 704 7.6E-12 T 11-11-2016 IPR025589 Topoisomerase C-terminal repeat ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 6.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 6.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 6.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 6.8E-37 T 11-11-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Gene3D G3DSA:1.10.460.10 465 576 1.3E-59 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Gene3D G3DSA:1.10.460.10 137 189 1.3E-59 T 11-11-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Pfam PF01751 Toprim domain 5 117 1.5E-26 T 11-11-2016 IPR006171 Toprim domain ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Pfam PF01131 DNA topoisomerase 133 562 2.7E-129 T 11-11-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 SMART SM00436 108 196 9.8E-45 T 11-11-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 681 53.449 T 11-11-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Gene3D G3DSA:2.70.20.10 328 464 1.8E-37 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Gene3D G3DSA:2.70.20.10 190 324 2.5E-31 T 11-11-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 11-11-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 SMART SM00437 252 525 3.1E-113 T 11-11-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 SUPERFAMILY SSF56712 3 576 3.14E-186 T 11-11-2016 IPR023405 DNA topoisomerase, type IA, core domain ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 618 5.3E-224 T 11-11-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 ATY42_RS02770 be31520443be05c6869a86bfe9041760 830 Gene3D G3DSA:3.40.50.140 1 136 2.4E-43 T 11-11-2016 IPR006171 Toprim domain ATY42_RS07130 3492e98106f2d96b2d57170977c01af7 285 SUPERFAMILY SSF51182 10 285 3.64E-89 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS07130 3492e98106f2d96b2d57170977c01af7 285 Gene3D G3DSA:2.60.120.10 10 259 1.2E-82 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS07130 3492e98106f2d96b2d57170977c01af7 285 Pfam PF02678 Pirin 26 126 5.6E-38 T 11-11-2016 IPR003829 Pirin, N-terminal domain ATY42_RS07130 3492e98106f2d96b2d57170977c01af7 285 PIRSF PIRSF006232 7 285 6.2E-97 T 11-11-2016 IPR012093 Pirin ATY42_RS07130 3492e98106f2d96b2d57170977c01af7 285 Pfam PF05726 Pirin C-terminal cupin domain 181 285 2.6E-30 T 11-11-2016 IPR008778 Pirin, C-terminal domain ATY42_RS01515 a123c26891156f95081205cbe321003c 799 Pfam PF06165 Glycosyltransferase family 36 88 286 1.4E-22 T 11-11-2016 IPR010383 Glycosyl hydrolase 94 ATY42_RS01515 a123c26891156f95081205cbe321003c 799 SUPERFAMILY SSF48208 294 797 2.93E-78 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS01515 a123c26891156f95081205cbe321003c 799 Gene3D G3DSA:2.70.98.40 21 347 4.2E-55 T 11-11-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 ATY42_RS01515 a123c26891156f95081205cbe321003c 799 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 326 724 2.1E-60 T 11-11-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain ATY42_RS01515 a123c26891156f95081205cbe321003c 799 SUPERFAMILY SSF74650 16 289 4.39E-69 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 ATY42_RS01515 a123c26891156f95081205cbe321003c 799 Gene3D G3DSA:2.60.420.10 716 763 2.9E-6 T 11-11-2016 ATY42_RS05615 f4f8947dac5e4a70797828276909a079 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 6 301 2.6E-65 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS05615 f4f8947dac5e4a70797828276909a079 312 SUPERFAMILY SSF53590 4 309 2.22E-87 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS05615 f4f8947dac5e4a70797828276909a079 312 Gene3D G3DSA:3.90.245.10 4 309 1.7E-91 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS01735 dfbc0c404cf4bb869dbc10d1073ab198 329 Gene3D G3DSA:1.20.1510.10 26 247 3.9E-52 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain ATY42_RS01735 dfbc0c404cf4bb869dbc10d1073ab198 329 SUPERFAMILY SSF161111 22 153 4.45E-52 T 11-11-2016 ATY42_RS01735 dfbc0c404cf4bb869dbc10d1073ab198 329 SUPERFAMILY SSF161111 180 248 4.45E-52 T 11-11-2016 ATY42_RS01735 dfbc0c404cf4bb869dbc10d1073ab198 329 Pfam PF01545 Cation efflux family 30 247 2.9E-38 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATY42_RS01735 dfbc0c404cf4bb869dbc10d1073ab198 329 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 320 3.7E-68 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATY42_RS18340 8477adb5a2c09298f799c45b241d9273 265 PIRSF PIRSF029730 9 264 4.1E-103 T 11-11-2016 IPR011227 Uncharacterised conserved protein UCP029730 ATY42_RS18340 8477adb5a2c09298f799c45b241d9273 265 SUPERFAMILY SSF53187 14 262 3.77E-79 T 11-11-2016 ATY42_RS18340 8477adb5a2c09298f799c45b241d9273 265 Pfam PF05013 N-formylglutamate amidohydrolase 31 238 2.4E-46 T 11-11-2016 IPR007709 N-formylglutamate amidohydrolase ATY42_RS18340 8477adb5a2c09298f799c45b241d9273 265 Gene3D G3DSA:3.40.630.40 21 262 4.9E-87 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 SUPERFAMILY SSF53697 21 331 2.67E-69 T 11-11-2016 ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 Gene3D G3DSA:3.10.580.10 205 330 1.2E-41 T 11-11-2016 ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 Pfam PF00571 CBS domain 212 267 5.2E-9 T 11-11-2016 IPR000644 CBS domain ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 Pfam PF00571 CBS domain 278 330 2.2E-7 T 11-11-2016 IPR000644 CBS domain ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 3.7E-111 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 SMART SM00116 284 332 0.002 T 11-11-2016 IPR000644 CBS domain ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 SMART SM00116 219 267 2.7E-5 T 11-11-2016 IPR000644 CBS domain ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 Pfam PF01380 SIS domain 50 181 9.7E-32 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 PIRSF PIRSF004692 5 333 1.7E-133 T 11-11-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 ATY42_RS06325 b1236e386267b7f3c4ca40d7ca67f478 333 Gene3D G3DSA:3.40.50.10490 21 204 1.5E-48 T 11-11-2016 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Gene3D G3DSA:2.40.170.20 711 964 3.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Gene3D G3DSA:2.40.170.20 524 662 3.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Gene3D G3DSA:2.40.170.20 409 467 3.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Gene3D G3DSA:2.40.170.20 172 240 3.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Gene3D G3DSA:2.40.170.20 331 371 3.3E-74 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Pfam PF00593 TonB dependent receptor 629 984 1.5E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 168 1.5E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 SUPERFAMILY SSF56935 43 226 9.89E-82 T 11-11-2016 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 SUPERFAMILY SSF56935 796 988 9.89E-82 T 11-11-2016 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 SUPERFAMILY SSF56935 719 764 9.89E-82 T 11-11-2016 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 SUPERFAMILY SSF56935 513 658 9.89E-82 T 11-11-2016 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 SUPERFAMILY SSF56935 330 451 9.89E-82 T 11-11-2016 ATY42_RS04570 664d1e9e8ccb4b01fbf7de088331c006 988 Gene3D G3DSA:2.170.130.10 56 171 7.1E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 411 30.624 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 378 2.8E-160 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 SUPERFAMILY SSF53067 9 198 1.88E-60 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Pfam PF14450 Cell division protein FtsA 11 195 4.7E-11 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Pfam PF14450 Cell division protein FtsA 208 375 6.6E-24 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 PIRSF PIRSF003101 1 411 3.0E-150 T 11-11-2016 IPR020823 Cell division protein FtsA GO:0007049 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Gene3D G3DSA:3.30.420.40 299 353 1.6E-33 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Gene3D G3DSA:3.30.420.40 210 235 1.6E-33 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 SMART SM00842 10 197 1.1E-103 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 1.2E-28 T 11-11-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Gene3D G3DSA:3.90.640.10 236 298 2.6E-19 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Gene3D G3DSA:3.30.420.40 158 209 1.0E-23 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Gene3D G3DSA:3.30.420.40 3 83 1.0E-23 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 Gene3D G3DSA:3.30.1490.110 95 157 8.6E-16 T 11-11-2016 ATY42_RS19235 39f8df064becedc18d4d09bfbcebfe05 411 SUPERFAMILY SSF53067 200 378 1.35E-45 T 11-11-2016 ATY42_RS00595 1218a2eb080b6f90a0e1d303f8063c35 316 Pfam PF05598 Transposase domain (DUF772) 50 122 1.4E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00595 1218a2eb080b6f90a0e1d303f8063c35 316 Pfam PF01609 Transposase DDE domain 135 310 1.0E-31 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS16835 4d6d1940adcc42ee5ccf4e0f0db362fe 105 SUPERFAMILY SSF53098 1 92 3.67E-24 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16835 4d6d1940adcc42ee5ccf4e0f0db362fe 105 Gene3D G3DSA:3.30.420.10 1 89 1.1E-25 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16835 4d6d1940adcc42ee5ccf4e0f0db362fe 105 Pfam PF13683 Integrase core domain 22 88 7.5E-29 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 PIRSF PIRSF000194 1 164 6.1E-54 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 Gene3D G3DSA:3.40.430.10 1 164 4.3E-49 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 Pfam PF00186 Dihydrofolate reductase 3 163 2.6E-51 T 11-11-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-11-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-113510|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-69205 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 PRINTS PR00070 Dihydrofolate reductase signature 41 52 1.5E-12 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 PRINTS PR00070 Dihydrofolate reductase signature 28 36 1.5E-12 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 PRINTS PR00070 Dihydrofolate reductase signature 14 24 1.5E-12 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 PRINTS PR00070 Dihydrofolate reductase signature 94 108 1.5E-12 T 11-11-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ATY42_RS18890 65e66ebd6f2b664b1ac6be2464b51807 164 SUPERFAMILY SSF53597 1 164 3.93E-49 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 2.1E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 2.1E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 295 309 2.1E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 2.1E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 276 2.1E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 230 239 2.1E-31 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 Gene3D G3DSA:3.40.50.1370 13 153 1.6E-42 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 314 1.3E-82 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 312 4.7E-22 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 SUPERFAMILY SSF53671 11 315 3.14E-87 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 38.827 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 Gene3D G3DSA:3.40.50.1370 154 293 1.1E-45 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 1.2E-34 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 5.7E-21 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 279 302 5.7E-21 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 5.7E-21 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS07010 1f4348a1da1668264b00adca15f9c74e 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 5.7E-21 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 SMART SM00859 7 128 3.5E-32 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 7 315 8.9E-100 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 6 316 30.889 T 11-11-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 Gene3D G3DSA:3.40.50.720 4 142 5.3E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 Gene3D G3DSA:3.30.360.10 143 290 2.0E-36 T 11-11-2016 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 8 122 4.7E-28 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 SUPERFAMILY SSF51735 6 152 6.61E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 131 147 - T 11-11-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATY42_RS13210 9f12b9c1990fd69fcf3e53a32ee420e7 316 SUPERFAMILY SSF55347 136 290 2.45E-35 T 11-11-2016 ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 Gene3D G3DSA:3.20.20.120 135 381 1.2E-78 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 SUPERFAMILY SSF51604 115 401 8.12E-71 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 SMART SM00922 145 274 5.9E-13 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 SUPERFAMILY SSF54826 26 129 5.38E-31 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 Pfam PF13378 Enolase C-terminal domain-like 211 393 3.6E-38 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 Gene3D G3DSA:3.30.390.10 23 134 3.8E-41 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 102 127 - T 11-11-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ATY42_RS22215 6aeae6a8091ee236ef1b488cdda0c5ba 419 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 30 127 2.2E-31 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Gene3D G3DSA:3.40.190.10 219 297 3.0E-21 T 11-11-2016 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 SUPERFAMILY SSF55021 304 399 6.41E-29 T 11-11-2016 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Pfam PF01842 ACT domain 320 384 2.1E-12 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Gene3D G3DSA:3.30.70.260 314 399 1.7E-30 T 11-11-2016 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 SMART SM00830 51 132 4.8E-28 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 SUPERFAMILY SSF48600 47 135 9.62E-20 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 PIRSF PIRSF001500 41 401 2.4E-139 T 11-11-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Gene3D G3DSA:1.20.59.10 37 129 1.7E-21 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Pfam PF01817 Chorismate mutase type II 51 130 4.5E-21 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Gene3D G3DSA:3.40.190.10 130 218 2.4E-30 T 11-11-2016 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 Pfam PF00800 Prephenate dehydratase 134 310 2.0E-59 T 11-11-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 TIGRFAM TIGR01807 CM_P2: chorismate mutase 47 122 5.0E-23 T 11-11-2016 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 ATY42_RS11850 4837a7a6f86f5b0fc14b35116f9e2e79 402 SUPERFAMILY SSF53850 133 317 2.61E-53 T 11-11-2016 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 SUPERFAMILY SSF49493 183 254 6.54E-18 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 SUPERFAMILY SSF49493 112 136 6.54E-18 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Gene3D G3DSA:2.60.260.20 253 330 1.1E-20 T 11-11-2016 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Gene3D G3DSA:2.60.260.20 197 250 5.7E-21 T 11-11-2016 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Gene3D G3DSA:2.60.260.20 109 135 5.7E-21 T 11-11-2016 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 PRINTS PR00625 DnaJ domain signature 7 25 7.1E-29 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 PRINTS PR00625 DnaJ domain signature 42 62 7.1E-29 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 PRINTS PR00625 DnaJ domain signature 25 40 7.1E-29 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 PRINTS PR00625 DnaJ domain signature 62 81 7.1E-29 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Pfam PF00226 DnaJ domain 5 67 3.3E-26 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 SUPERFAMILY SSF57938 132 208 2.49E-20 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 370 39.548 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 SMART SM00271 4 62 6.8E-31 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 346 1.4E-126 T 11-11-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 SUPERFAMILY SSF49493 256 341 7.72E-20 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Pfam PF00684 DnaJ central domain 145 204 2.0E-13 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Gene3D G3DSA:1.10.287.110 1 102 6.4E-35 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Gene3D G3DSA:2.10.230.10 136 196 6.7E-22 T 11-11-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 SUPERFAMILY SSF46565 1 105 1.02E-33 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS09860 d88f274c08dd835d41ebc35cf67c6981 376 Pfam PF01556 DnaJ C terminal domain 120 330 5.0E-40 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 8 90 8.9E-25 T 11-11-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 3 274 32.519 T 11-11-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 Gene3D G3DSA:3.40.192.10 4 107 2.7E-38 T 11-11-2016 ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 SUPERFAMILY SSF53223 4 102 1.15E-30 T 11-11-2016 ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 194 1.1E-11 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 SUPERFAMILY SSF51735 103 273 2.15E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 6 273 3.3E-71 T 11-11-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ATY42_RS01865 b97b0129c63cc61b2dd6164b66c32060 283 Gene3D G3DSA:3.40.50.720 108 274 1.7E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18420 250782d228de01defe6ae50729b6d134 216 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 45 207 36.286 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS18420 250782d228de01defe6ae50729b6d134 216 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 47 201 7.1E-60 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS18420 250782d228de01defe6ae50729b6d134 216 Pfam PF01625 Peptide methionine sulfoxide reductase 48 201 1.4E-61 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS18420 250782d228de01defe6ae50729b6d134 216 SUPERFAMILY SSF55068 10 210 5.89E-74 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS18420 250782d228de01defe6ae50729b6d134 216 Gene3D G3DSA:3.30.1060.10 11 201 8.8E-73 T 11-11-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Gene3D G3DSA:3.40.50.300 5 110 1.1E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Gene3D G3DSA:3.40.50.300 192 286 1.1E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 725 0.0 T 11-11-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 SUPERFAMILY SSF52540 6 647 5.5E-174 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Gene3D G3DSA:1.10.10.160 114 191 7.5E-22 T 11-11-2016 IPR013986 DExx box DNA helicase domain ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Gene3D G3DSA:1.10.486.10 389 546 1.1E-46 T 11-11-2016 ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Gene3D G3DSA:3.40.50.300 287 388 3.5E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Gene3D G3DSA:3.40.50.300 557 647 3.5E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 1.7E-67 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ATY42_RS22970 10d88720a81f22c0c9207a71b001e33e 728 Pfam PF13361 UvrD-like helicase C-terminal domain 278 621 5.2E-71 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 8.7E-34 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 SUPERFAMILY SSF53155 4 82 7.65E-18 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 11-11-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 161 36.336 T 11-11-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 2.3E-31 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 SUPERFAMILY SSF46767 78 160 2.09E-31 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 Gene3D G3DSA:1.10.10.10 78 160 3.2E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS07560 b9e3dd7f4ccd6218d3b1d21f6a491a07 181 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 75 1.2E-4 T 11-11-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS13330 d686ed1f9940db264d7a00893767b09b 402 SUPERFAMILY SSF53098 21 366 1.97E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13330 d686ed1f9940db264d7a00893767b09b 402 Pfam PF13546 DDE superfamily endonuclease 1 254 1.6E-84 T 11-11-2016 ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 Pfam PF00005 ABC transporter 398 551 6.5E-35 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 Gene3D G3DSA:1.20.1560.10 34 346 6.6E-18 T 11-11-2016 ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 SMART SM00382 406 597 9.4E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 Gene3D G3DSA:3.40.50.300 382 615 2.5E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 SUPERFAMILY SSF52540 371 621 1.88E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 SUPERFAMILY SSF90123 31 343 2.49E-27 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS11600 0186c3112bb36851dc807cb93d7e5c5a 626 ProSitePatterns PS00211 ABC transporters family signature. 523 537 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 SUPERFAMILY SSF56235 1 196 2.4E-54 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 SMART SM01172 5 210 0.0034 T 11-11-2016 IPR024286 Domain of unknown function DUF3700 ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 SUPERFAMILY SSF52402 212 487 7.07E-74 T 11-11-2016 ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 Gene3D G3DSA:3.60.20.10 1 193 7.3E-61 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 Pfam PF00733 Asparagine synthase 214 370 8.3E-56 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 Gene3D G3DSA:3.40.50.620 199 519 3.6E-111 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 PIRSF PIRSF001589 1 524 1.0E-127 T 11-11-2016 ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 Pfam PF13537 Glutamine amidotransferase domain 50 169 8.8E-40 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain ATY42_RS09675 ef0ebe27014b62bd302ad1888a2572d9 564 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 375 2.3E-105 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 4.4E-7 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 4.4E-7 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 4.4E-7 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 Pfam PF00459 Inositol monophosphatase family 9 243 7.0E-48 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 Gene3D G3DSA:3.40.190.80 162 257 9.8E-41 T 11-11-2016 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 10 254 5.9E-95 T 11-11-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 Gene3D G3DSA:3.30.540.10 7 161 1.0E-43 T 11-11-2016 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 SUPERFAMILY SSF56655 6 258 1.83E-74 T 11-11-2016 ATY42_RS08700 a9c4e02ffb3e1b17c560cb378304271b 266 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 11-11-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 Gene3D G3DSA:1.10.3120.10 200 388 1.4E-44 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 Gene3D G3DSA:3.30.70.1050 1 111 6.6E-31 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 SUPERFAMILY SSF102735 1 125 1.57E-30 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 260 413 5.6E-36 T 11-11-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 140 5.3E-35 T 11-11-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 PIRSF PIRSF003095 1 428 5.1E-101 T 11-11-2016 IPR005215 Trigger factor GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 TIGRFAM TIGR00115 tig: trigger factor 11 411 1.0E-106 T 11-11-2016 IPR005215 Trigger factor GO:0015031 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 SUPERFAMILY SSF109998 244 428 9.94E-38 T 11-11-2016 IPR027304 Trigger factor/SurA domain ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 SUPERFAMILY SSF54534 128 242 1.94E-16 T 11-11-2016 ATY42_RS04940 24ba8c4a8f6fb7a1bff15421f045722f 430 Hamap MF_00303 Trigger factor [tig]. 1 418 17.437 T 11-11-2016 IPR005215 Trigger factor GO:0015031 ATY42_RS05120 ae02861b24b779dd191c0bb5395d1fe1 81 Pfam PF02597 ThiS family 7 81 9.9E-17 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 ATY42_RS05120 ae02861b24b779dd191c0bb5395d1fe1 81 Gene3D G3DSA:3.10.20.30 4 81 8.8E-19 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS05120 ae02861b24b779dd191c0bb5395d1fe1 81 SUPERFAMILY SSF54285 5 81 4.86E-17 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ATY42_RS09475 958dc1de021726ca4a9ff9e695069e12 435 PIRSF PIRSF020818 1 424 7.5E-200 T 11-11-2016 IPR010915 Polyhydroxyalkanoate depolymerase ATY42_RS09475 958dc1de021726ca4a9ff9e695069e12 435 SUPERFAMILY SSF53474 106 409 7.15E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09475 958dc1de021726ca4a9ff9e695069e12 435 Pfam PF06850 PHB de-polymerase C-terminus 211 412 7.6E-100 T 11-11-2016 IPR009656 PHB de-polymerase, C-terminal ATY42_RS09475 958dc1de021726ca4a9ff9e695069e12 435 Gene3D G3DSA:3.40.50.1820 106 230 1.4E-11 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09475 958dc1de021726ca4a9ff9e695069e12 435 Gene3D G3DSA:3.40.50.1820 274 411 1.4E-11 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09475 958dc1de021726ca4a9ff9e695069e12 435 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 2 412 1.1E-206 T 11-11-2016 IPR010915 Polyhydroxyalkanoate depolymerase ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 1.6E-42 T 11-11-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 25.188 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 Gene3D G3DSA:3.30.860.10 1 87 2.1E-39 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 1.2E-22 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 1.2E-22 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 1.2E-22 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 11-11-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 SUPERFAMILY SSF54570 3 82 6.15E-34 T 11-11-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 Pfam PF00203 Ribosomal protein S19 3 81 2.8E-36 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18025 1c9a27fcc6d9c51cbfdde03e6ed17e70 89 PIRSF PIRSF002144 1 89 3.2E-32 T 11-11-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 SMART SM00347 29 130 2.4E-16 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 11-11-2016 IPR023187 Transcriptional regulator MarR-type, conserved site ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 Pfam PF01047 MarR family 41 94 6.9E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 Gene3D G3DSA:1.10.10.10 8 145 4.0E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 SUPERFAMILY SSF46785 10 145 1.55E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 1.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS09715 d5e93eaaf2e94275b8b3d7d97347e4b0 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.4E-11 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS06120 2599e5ebd236f2c6e86bd430df66627f 257 Pfam PF04012 PspA/IM30 family 2 228 1.2E-37 T 11-11-2016 IPR007157 PspA/IM30 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 17.805 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 198 2.0E-25 T 11-11-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 206 34.94 T 11-11-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 SUPERFAMILY SSF141734 13 113 3.92E-43 T 11-11-2016 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.4E-31 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 9.0E-24 T 11-11-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 202 2.9E-10 T 11-11-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 ATY42_RS11055 9f904e71d66013e2f2cead68dfcbaf6a 206 SUPERFAMILY SSF101386 117 205 3.05E-20 T 11-11-2016 ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 SUPERFAMILY SSF53448 5 279 9.86E-74 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 Pfam PF01050 Mannose-6-phosphate isomerase 312 462 1.3E-73 T 11-11-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 Gene3D G3DSA:3.90.550.10 2 269 7.7E-106 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 Pfam PF00483 Nucleotidyl transferase 6 285 2.7E-77 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 SUPERFAMILY SSF51182 183 467 1.87E-88 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 Gene3D G3DSA:2.60.120.10 354 466 1.9E-48 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS03845 459ce0217a49d49b9e562033dd5f42fd 467 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 5 466 1.8E-228 T 11-11-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 Gene3D G3DSA:3.30.70.270 401 561 3.3E-54 T 11-11-2016 ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 395 559 3.9E-56 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 Gene3D G3DSA:3.30.450.40 230 399 1.1E-13 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 Pfam PF05227 CHASE3 domain 40 174 4.1E-32 T 11-11-2016 IPR007891 CHASE3 ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 SUPERFAMILY SSF55781 257 398 1.29E-11 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 SUPERFAMILY SSF55073 404 559 3.3E-49 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 Pfam PF00990 Diguanylate cyclase, GGDEF domain 400 557 9.3E-49 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS09115 9a8d8d8f227d7fb899c6f852e4fe92fb 569 SMART SM00267 388 561 2.5E-62 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS14745 e0a27129ad75a300ca429d441f2c0ecd 210 Gene3D G3DSA:3.40.50.150 4 206 1.0E-67 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14745 e0a27129ad75a300ca429d441f2c0ecd 210 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 9 205 27.443 T 11-11-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 ATY42_RS14745 e0a27129ad75a300ca429d441f2c0ecd 210 SUPERFAMILY SSF53335 28 204 2.09E-39 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14745 e0a27129ad75a300ca429d441f2c0ecd 210 PIRSF PIRSF005461 1 210 1.5E-70 T 11-11-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 ATY42_RS14745 e0a27129ad75a300ca429d441f2c0ecd 210 Pfam PF01728 FtsJ-like methyltransferase 30 204 1.6E-49 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PIRSF PIRSF002583 2 634 2.2E-205 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 SUPERFAMILY SSF110942 518 630 2.22E-32 T 11-11-2016 ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 SUPERFAMILY SSF55874 8 218 1.7E-63 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 30 185 1.1E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 29 51 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 175 192 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 78 95 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 123 145 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 193 211 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 8 28 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 PRINTS PR00775 90kDa heat shock protein signature 96 113 9.6E-58 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 Pfam PF00183 Hsp90 protein 228 629 8.5E-126 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 Gene3D G3DSA:3.30.565.10 9 243 2.9E-79 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 28 37 - T 11-11-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 SMART SM00387 30 187 7.3E-10 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 5 630 31.802 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ATY42_RS12430 100457cf49d844314311f519bbd399b8 634 SUPERFAMILY SSF54211 236 491 9.1E-94 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS14470 53bffbb1367fd57388832feb089f827d 298 SUPERFAMILY SSF51569 2 285 8.35E-71 T 11-11-2016 ATY42_RS14470 53bffbb1367fd57388832feb089f827d 298 Gene3D G3DSA:3.20.20.70 4 288 1.1E-90 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS14470 53bffbb1367fd57388832feb089f827d 298 Pfam PF00682 HMGL-like 5 275 1.3E-52 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 55 286 1.4E-30 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 21 289 8.4E-126 T 11-11-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 PIRSF PIRSF000770 7 291 1.3E-34 T 11-11-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 259 285 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 PRINTS PR00046 Major sigma-70 factor signature 84 97 4.2E-19 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 PRINTS PR00046 Major sigma-70 factor signature 259 274 4.2E-19 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 PRINTS PR00046 Major sigma-70 factor signature 239 251 4.2E-19 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 PRINTS PR00046 Major sigma-70 factor signature 274 285 4.2E-19 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 SUPERFAMILY SSF88946 22 129 5.81E-38 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 8 291 54.037 T 11-11-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 Pfam PF00140 Sigma-70 factor, region 1.2 22 53 1.2E-4 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 Gene3D G3DSA:1.10.601.10 22 129 2.9E-35 T 11-11-2016 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 Pfam PF04545 Sigma-70, region 4 236 286 1.4E-14 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 Gene3D G3DSA:1.10.10.10 231 287 8.9E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 Pfam PF04542 Sigma-70 region 2 60 129 1.3E-16 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS21570 7dbc0e3367cc5ed8d38fb205e67dae1b 291 SUPERFAMILY SSF88659 208 288 8.41E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS03755 9cb7c84b0f53e8ee15b9d784b6d6a4ff 397 Gene3D G3DSA:3.90.1150.10 260 393 3.1E-55 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS03755 9cb7c84b0f53e8ee15b9d784b6d6a4ff 397 SUPERFAMILY SSF53383 20 393 8.43E-125 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS03755 9cb7c84b0f53e8ee15b9d784b6d6a4ff 397 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 393 7.9E-161 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS03755 9cb7c84b0f53e8ee15b9d784b6d6a4ff 397 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS03755 9cb7c84b0f53e8ee15b9d784b6d6a4ff 397 PIRSF PIRSF001434 3 396 8.4E-149 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS03755 9cb7c84b0f53e8ee15b9d784b6d6a4ff 397 Gene3D G3DSA:3.40.640.10 16 259 2.1E-97 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF55326 213 415 1.53E-51 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF56042 620 680 4.93E-49 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF56042 421 583 4.93E-49 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 812 0.0 T 11-11-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF52317 1095 1349 1.58E-91 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1350 20.47 T 11-11-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Gene3D G3DSA:3.30.1330.10 670 826 1.5E-13 T 11-11-2016 IPR016188 PurM-like, N-terminal domain ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Gene3D G3DSA:3.30.1330.10 203 411 3.0E-35 T 11-11-2016 IPR016188 PurM-like, N-terminal domain ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Pfam PF02769 AIR synthase related protein, C-terminal domain 421 578 2.2E-30 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Pfam PF02769 AIR synthase related protein, C-terminal domain 880 1024 5.7E-10 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Gene3D G3DSA:3.40.50.880 1099 1322 4.7E-10 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF82697 1 148 2.14E-32 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF109736 157 212 2.09E-18 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SMART SM01211 1098 1349 9.3E-146 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF55326 645 816 8.89E-58 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF55326 844 866 8.89E-58 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1098 1349 8.3E-100 T 11-11-2016 ATY42_RS04045 f34678647294a9cc46b5188020eafff5 1350 SUPERFAMILY SSF56042 875 1091 9.42E-49 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS14005 81ac25aefae6683cefe588d53992dac5 284 Pfam PF13276 HTH-like domain 38 91 2.2E-13 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS14005 81ac25aefae6683cefe588d53992dac5 284 Pfam PF00665 Integrase core domain 119 233 6.2E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS14005 81ac25aefae6683cefe588d53992dac5 284 SUPERFAMILY SSF53098 112 278 4.05E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14005 81ac25aefae6683cefe588d53992dac5 284 Gene3D G3DSA:3.30.420.10 113 272 8.1E-34 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14025 81ac25aefae6683cefe588d53992dac5 284 Pfam PF13276 HTH-like domain 38 91 2.2E-13 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS14025 81ac25aefae6683cefe588d53992dac5 284 Pfam PF00665 Integrase core domain 119 233 6.2E-31 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS14025 81ac25aefae6683cefe588d53992dac5 284 SUPERFAMILY SSF53098 112 278 4.05E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14025 81ac25aefae6683cefe588d53992dac5 284 Gene3D G3DSA:3.30.420.10 113 272 8.1E-34 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 Pfam PF04820 Tryptophan halogenase 16 465 1.9E-188 T 11-11-2016 IPR006905 Tryptophan halogenase ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 SUPERFAMILY SSF51905 325 425 6.4E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 SUPERFAMILY SSF51905 16 98 6.4E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 SUPERFAMILY SSF51905 142 240 6.4E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 PIRSF PIRSF011396 10 502 3.2E-183 T 11-11-2016 IPR006905 Tryptophan halogenase ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 Gene3D G3DSA:3.50.50.60 16 83 6.1E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 Gene3D G3DSA:3.50.50.60 158 238 6.1E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01775 2f46693d6ce33b0a8f6d4290d8d6b3ed 521 Gene3D G3DSA:3.50.50.60 320 364 6.1E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS20565 6dc4d3afd96c7052eb426f606faadd0c 258 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 244 5.0E-23 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20565 6dc4d3afd96c7052eb426f606faadd0c 258 SUPERFAMILY SSF69618 11 249 1.44E-45 T 11-11-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS20565 6dc4d3afd96c7052eb426f606faadd0c 258 Gene3D G3DSA:3.40.50.10090 144 247 1.3E-4 T 11-11-2016 ATY42_RS20565 6dc4d3afd96c7052eb426f606faadd0c 258 Gene3D G3DSA:3.40.50.10090 17 122 7.9E-11 T 11-11-2016 ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 Pfam PF00106 short chain dehydrogenase 8 202 3.8E-47 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 150 9.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 9.6E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 SUPERFAMILY SSF51735 7 252 8.23E-65 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 199 0.0018 T 11-11-2016 ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.4E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.4E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.4E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.4E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.4E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.4E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS14475 cced7cc3514e22f5426bb16cc7f836e5 256 Gene3D G3DSA:3.40.50.720 7 252 1.1E-72 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 691 699 - T 11-11-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 585 787 2.4E-94 T 11-11-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 SUPERFAMILY SSF52540 315 603 1.46E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 SUPERFAMILY SSF54211 610 785 3.68E-57 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Gene3D G3DSA:3.30.230.10 605 786 1.2E-72 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Hamap MF_01973 Lon protease [lon]. 11 787 72.44 T 11-11-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 TIGRFAM TIGR00763 lon: endopeptidase La 12 786 0.0 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 SUPERFAMILY SSF88697 10 202 5.72E-48 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 SMART SM00464 10 203 3.2E-70 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Gene3D G3DSA:1.10.8.60 501 599 6.6E-32 T 11-11-2016 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Gene3D G3DSA:3.40.50.300 311 500 1.6E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 SMART SM00382 349 495 4.0E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 353 489 7.5E-18 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 688 707 5.3E-53 T 11-11-2016 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 357 376 5.3E-53 T 11-11-2016 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 610 626 5.3E-53 T 11-11-2016 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 741 759 5.3E-53 T 11-11-2016 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 718 737 5.3E-53 T 11-11-2016 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 PIRSF PIRSF001174 1 789 0.0 T 11-11-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ATY42_RS04955 32d632976e83c4e47baf7736f538fab9 823 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 11 200 2.0E-39 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.568 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 SUPERFAMILY SSF55031 179 287 6.13E-29 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 Pfam PF07687 Peptidase dimerisation domain 175 282 3.5E-26 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 SUPERFAMILY SSF53187 2 178 7.6E-63 T 11-11-2016 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 SUPERFAMILY SSF53187 292 373 7.6E-63 T 11-11-2016 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 Gene3D G3DSA:3.30.70.360 188 286 2.7E-32 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 Pfam PF01546 Peptidase family M20/M25/M40 63 371 3.7E-40 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 5 373 2.7E-163 T 11-11-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 Gene3D G3DSA:3.40.630.10 316 374 1.9E-72 T 11-11-2016 ATY42_RS09670 c99737196501484b26be4f8bd239ca3a 376 Gene3D G3DSA:3.40.630.10 1 187 1.9E-72 T 11-11-2016 ATY42_RS07430 02fbaf4dd910623b4d46a5ca0f475b6d 276 SUPERFAMILY SSF69572 5 260 1.02E-54 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ATY42_RS07430 02fbaf4dd910623b4d46a5ca0f475b6d 276 Gene3D G3DSA:3.40.50.720 3 260 1.5E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07430 02fbaf4dd910623b4d46a5ca0f475b6d 276 Pfam PF00899 ThiF family 19 162 1.5E-33 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ATY42_RS00140 cc8897c5817f32ca97780958bc39cc14 93 SUPERFAMILY SSF56935 32 93 5.49E-6 T 11-11-2016 ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 SMART SM00825 Beta-ketoacyl synthase 4 402 2.4E-12 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 SUPERFAMILY SSF53901 213 400 8.64E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 4.8E-47 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 Gene3D G3DSA:3.40.47.10 261 401 1.1E-44 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 359 8.8E-24 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 Gene3D G3DSA:3.40.47.10 6 257 1.3E-62 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS03665 564c49a2020b5408113fe87f00741cd8 402 SUPERFAMILY SSF53901 1 251 1.0E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 Pfam PF00072 Response regulator receiver domain 6 114 1.6E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 SUPERFAMILY SSF52172 1 126 1.37E-40 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 SMART SM00862 152 228 9.4E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 SUPERFAMILY SSF46894 127 228 7.09E-20 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 Gene3D G3DSA:3.40.50.2300 3 122 2.2E-38 T 11-11-2016 ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 Gene3D G3DSA:1.10.10.10 128 229 2.0E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 228 1.3E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS07665 979953e57643b2951d24203be7137ba4 229 SMART SM00448 4 114 1.8E-40 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03630 6d74fe31b9a0c892cda1886a86169838 174 ProSitePatterns PS00935 Glyoxalase I signature 2. 111 127 - T 11-11-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ATY42_RS03630 6d74fe31b9a0c892cda1886a86169838 174 SUPERFAMILY SSF54593 21 172 1.25E-32 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS03630 6d74fe31b9a0c892cda1886a86169838 174 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 24 167 8.2E-23 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS03630 6d74fe31b9a0c892cda1886a86169838 174 Gene3D G3DSA:3.10.180.10 16 172 2.4E-56 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS03630 6d74fe31b9a0c892cda1886a86169838 174 ProSitePatterns PS00934 Glyoxalase I signature 1. 26 47 - T 11-11-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ATY42_RS03630 6d74fe31b9a0c892cda1886a86169838 174 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 17 171 4.4E-43 T 11-11-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Pfam PF00563 EAL domain 497 733 3.3E-72 T 11-11-2016 IPR001633 EAL domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 319 478 2.7E-36 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SMART SM00052 491 738 2.2E-107 T 11-11-2016 IPR001633 EAL domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SMART SM00065 150 318 2.0E-4 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Pfam PF13426 PAS domain 45 147 1.5E-18 T 11-11-2016 IPR000014 PAS domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Pfam PF13185 GAF domain 167 308 1.2E-9 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SUPERFAMILY SSF55785 39 146 2.42E-23 T 11-11-2016 IPR000014 PAS domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Gene3D G3DSA:3.30.450.20 42 147 2.5E-25 T 11-11-2016 ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Gene3D G3DSA:3.30.70.270 323 489 9.2E-52 T 11-11-2016 ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Gene3D G3DSA:3.20.20.450 495 744 6.8E-90 T 11-11-2016 IPR001633 EAL domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SUPERFAMILY SSF55073 326 482 2.12E-46 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SMART SM00091 33 100 8.2E-8 T 11-11-2016 IPR000014 PAS domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SMART SM00086 106 148 2.7E-7 T 11-11-2016 IPR001610 PAC motif ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SMART SM00267 310 481 8.8E-60 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 31 152 4.2E-20 T 11-11-2016 IPR000014 PAS domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SUPERFAMILY SSF55781 170 321 2.4E-20 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 PIRSF PIRSF005925 22 747 0.0 T 11-11-2016 ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Gene3D G3DSA:3.30.450.40 156 320 8.3E-16 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 Pfam PF00990 Diguanylate cyclase, GGDEF domain 321 476 2.7E-42 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS14280 e6acfb7809f7898d03f4fa59998df3e9 747 SUPERFAMILY SSF141868 497 743 1.83E-82 T 11-11-2016 IPR001633 EAL domain ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 Hamap MF_00017 Recombination protein RecR [recR]. 1 196 95.517 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 ProSitePatterns PS01300 RecR protein signature. 55 76 - T 11-11-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 SUPERFAMILY SSF111304 3 195 3.4E-70 T 11-11-2016 IPR023627 Recombination protein RecR ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 SMART SM00493 78 163 7.1E-10 T 11-11-2016 IPR006171 Toprim domain ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 Pfam PF02132 RecR protein 38 76 1.7E-13 T 11-11-2016 IPR023628 Recombination protein RecR, C4-type zinc finger ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 TIGRFAM TIGR00615 recR: recombination protein RecR 3 193 4.1E-72 T 11-11-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ATY42_RS05150 aaaae138433a07e266ec5bb8982ee9bf 197 Pfam PF13662 Toprim domain 79 169 2.9E-22 T 11-11-2016 IPR006171 Toprim domain ATY42_RS00225 7f450a288cd00cd6b045fa7f6ecebdfc 143 Pfam PF06903 VirK protein 26 120 4.4E-37 T 11-11-2016 IPR010694 Uncharacterised protein family VirK ATY42_RS00225 7f450a288cd00cd6b045fa7f6ecebdfc 143 Gene3D G3DSA:3.10.450.50 29 121 1.5E-4 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Gene3D G3DSA:3.90.400.10 122 190 9.7E-26 T 11-11-2016 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SMART SM00642 30 430 2.0E-107 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Gene3D G3DSA:3.20.20.80 198 424 6.4E-110 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Gene3D G3DSA:3.20.20.80 457 470 6.4E-110 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Gene3D G3DSA:3.20.20.80 24 121 6.4E-110 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 575 1106 7.4E-214 T 11-11-2016 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Pfam PF16657 Maltogenic Amylase, C-terminal domain 478 554 2.3E-26 T 11-11-2016 IPR032091 Maltogenic Amylase, C-terminal ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 21 558 8.2E-300 T 11-11-2016 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Gene3D G3DSA:2.60.40.1180 478 557 5.2E-18 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SUPERFAMILY SSF51445 20 341 1.59E-131 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SUPERFAMILY SSF51445 368 475 1.59E-131 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SUPERFAMILY SSF56112 864 1007 3.23E-12 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SUPERFAMILY SSF56112 743 836 3.23E-12 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SUPERFAMILY SSF56112 1038 1060 3.23E-12 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 SUPERFAMILY SSF51011 478 557 5.16E-17 T 11-11-2016 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Pfam PF00128 Alpha amylase, catalytic domain 45 399 5.4E-77 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00855 5daafd2cff7180a39f51a421e80170d7 1116 Gene3D G3DSA:3.90.1200.10 862 980 3.1E-5 T 11-11-2016 ATY42_RS03945 641aab263ace02f03194b391bd080ffe 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS03945 641aab263ace02f03194b391bd080ffe 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 Gene3D G3DSA:2.40.50.230 210 310 4.8E-28 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 494 595 1.8E-26 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 Pfam PF05954 Phage late control gene D protein (GPD) 3 166 3.3E-23 T 11-11-2016 ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 15 364 2.0E-37 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 SUPERFAMILY SSF69255 204 310 1.65E-22 T 11-11-2016 ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 SUPERFAMILY SSF69349 300 363 9.42E-6 T 11-11-2016 ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 SUPERFAMILY SSF69279 39 204 1.07E-15 T 11-11-2016 ATY42_RS17540 b54c49f8c518cf16a494445d35613bd6 602 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 341 444 1.1E-29 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS10440 515f31d9d56d9e9a606ee9e74d68006f 50 Gene3D G3DSA:3.30.420.10 2 34 2.8E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10440 515f31d9d56d9e9a606ee9e74d68006f 50 Pfam PF13683 Integrase core domain 2 33 2.0E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS02660 a7c4945efa560744da1f941772fe73f7 135 Pfam PF05635 23S rRNA-intervening sequence protein 15 96 3.5E-26 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein ATY42_RS02660 a7c4945efa560744da1f941772fe73f7 135 SUPERFAMILY SSF158446 13 122 7.32E-26 T 11-11-2016 ATY42_RS02660 a7c4945efa560744da1f941772fe73f7 135 Gene3D G3DSA:1.20.1440.60 12 100 7.4E-25 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein ATY42_RS02660 a7c4945efa560744da1f941772fe73f7 135 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 19 122 6.6E-26 T 11-11-2016 IPR012657 23S rRNA-intervening sequence protein ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SMART SM00869 2430 2691 3.6E-37 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 1740 2152 3.92E-33 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 495 523 3.3E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 409 440 9.3E-5 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1850 1879 2.0E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1914 1942 5.3E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2171 2202 2.4E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1300 1329 7.3E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1128 1159 3.5E-9 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 666 697 6.3E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2042 2070 1.7E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1978 2007 7.1E-9 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1395 1426 7.2E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 753 782 1.8E-10 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 580 611 1.3E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1679 1709 4.4E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1764 1794 3.4E-9 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2106 2134 2.8E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 582 610 6.2E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1215 1244 5.2E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1851 1879 3.9E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1130 1158 1.8E-6 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1765 1794 2.1E-9 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 753 781 2.6E-9 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 847 873 0.024 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 2044 2070 1.2E-5 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 2171 2201 4.2E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1679 1708 8.3E-5 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 667 696 1.2E-4 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 495 522 1.9E-5 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1916 1942 1.1E-5 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1979 2007 4.3E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 2107 2134 1.5E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 410 438 0.01 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1301 1329 4.0E-7 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Pfam PF12951 Passenger-associated-transport-repeat 1396 1424 0.0011 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 965 1161 5.65E-18 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 1193 1269 5.65E-18 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 1190 1516 5.65E-19 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 1381 1743 4.08E-23 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 472 717 5.02E-20 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.40.128.130 2387 2701 2.9E-49 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 728 968 7.22E-14 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 1645 1730 3.0E-7 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 1094 1508 1.0E-25 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 2083 2308 1.3E-11 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 724 960 2.4E-14 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 471 632 1.4E-9 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 1731 2082 1.3E-31 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 Gene3D G3DSA:2.160.20.20 364 464 9.7E-5 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF103515 2394 2701 2.48E-52 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11830 5e4436adea6b1a37c73d5ef5e0609a51 2701 SUPERFAMILY SSF51126 121 469 4.87E-8 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 Gene3D G3DSA:3.30.70.100 201 284 1.4E-22 T 11-11-2016 ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 SUPERFAMILY SSF50182 132 198 1.41E-16 T 11-11-2016 IPR010920 LSM domain ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 Pfam PF00924 Mechanosensitive ion channel 90 287 6.1E-50 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 SUPERFAMILY SSF82861 47 131 3.4E-18 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 162 196 - T 11-11-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 Gene3D G3DSA:2.30.30.60 148 197 1.0E-16 T 11-11-2016 ATY42_RS10785 9c29bb811bb32f5729de30e297c631be 328 SUPERFAMILY SSF82689 201 297 2.88E-26 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ATY42_RS17950 fd2ef71b6ed7ecfc11a0f758bcade7ea 147 Gene3D G3DSA:3.100.10.10 34 146 2.0E-18 T 11-11-2016 ATY42_RS17950 fd2ef71b6ed7ecfc11a0f758bcade7ea 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 30 146 6.4E-26 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P ATY42_RS17950 fd2ef71b6ed7ecfc11a0f758bcade7ea 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 112 142 - T 11-11-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17950 fd2ef71b6ed7ecfc11a0f758bcade7ea 147 SUPERFAMILY SSF52080 6 146 7.59E-38 T 11-11-2016 IPR021131 Ribosomal protein L18e/L15P ATY42_RS17950 fd2ef71b6ed7ecfc11a0f758bcade7ea 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 146 2.5E-43 T 11-11-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17950 fd2ef71b6ed7ecfc11a0f758bcade7ea 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 147 17.089 T 11-11-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ATY42_RS03820 f83d1b54e627f1daa546fd89017c2e46 248 SUPERFAMILY SSF52402 1 244 8.37E-78 T 11-11-2016 ATY42_RS03820 f83d1b54e627f1daa546fd89017c2e46 248 SMART SM00893 23 211 3.5E-56 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATY42_RS03820 f83d1b54e627f1daa546fd89017c2e46 248 Pfam PF01012 Electron transfer flavoprotein domain 26 206 1.4E-42 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATY42_RS03820 f83d1b54e627f1daa546fd89017c2e46 248 PIRSF PIRSF000090 1 248 4.6E-82 T 11-11-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105 ATY42_RS03820 f83d1b54e627f1daa546fd89017c2e46 248 Gene3D G3DSA:3.40.50.620 1 244 4.3E-93 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:1.10.150.20 717 823 2.1E-34 T 11-11-2016 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 ProSitePatterns PS00447 DNA polymerase family A signature. 759 778 - T 11-11-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SMART SM00482 691 897 1.5E-106 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SMART SM00279 168 203 2.8E-13 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SUPERFAMILY SSF47807 166 280 5.53E-31 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SUPERFAMILY SSF56672 527 933 2.0E-154 T 11-11-2016 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 TIGRFAM TIGR00593 pola: DNA polymerase I 4 933 2.5E-267 T 11-11-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SMART SM00474 335 522 5.6E-33 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:1.10.150.20 180 241 6.3E-26 T 11-11-2016 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 166 260 9.2E-27 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SUPERFAMILY SSF88723 1 165 8.41E-51 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 165 1.4E-47 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SUPERFAMILY SSF53098 338 522 6.33E-52 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:3.40.50.1010 3 179 2.8E-62 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Pfam PF01612 3'-5' exonuclease 335 521 3.1E-37 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:1.20.1060.10 548 668 8.0E-38 T 11-11-2016 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Pfam PF00476 DNA polymerase family A 556 930 8.2E-147 T 11-11-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:3.30.70.370 669 716 3.2E-64 T 11-11-2016 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:3.30.70.370 824 933 3.2E-64 T 11-11-2016 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 807 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 818 829 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 683 698 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 735 748 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 784 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 660 682 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 728 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 850 866 4.1E-79 T 11-11-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 Gene3D G3DSA:3.30.420.10 334 547 3.0E-83 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21310 61a8b45d0d88a3197bd61daf350a0b93 933 SMART SM00475 2 256 1.8E-107 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ATY42_RS16115 cd368c1e1e72985c1116282545be6199 106 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 101 7.2E-41 T 11-11-2016 IPR004480 Monothiol glutaredoxin-related ATY42_RS16115 cd368c1e1e72985c1116282545be6199 106 Pfam PF00462 Glutaredoxin 16 81 7.8E-17 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ATY42_RS16115 cd368c1e1e72985c1116282545be6199 106 PIRSF PIRSF005894 1 106 7.6E-46 T 11-11-2016 IPR014434 Monothiol glutaredoxin ATY42_RS16115 cd368c1e1e72985c1116282545be6199 106 Gene3D G3DSA:3.40.30.10 7 102 1.4E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16115 cd368c1e1e72985c1116282545be6199 106 SUPERFAMILY SSF52833 3 102 1.96E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS12035 ecdb6074a5cf25cc0334b754607e84dc 220 SMART SM00947 30 193 2.5E-66 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12035 ecdb6074a5cf25cc0334b754607e84dc 220 Gene3D G3DSA:3.40.1050.10 1 205 5.2E-76 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12035 ecdb6074a5cf25cc0334b754607e84dc 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12035 ecdb6074a5cf25cc0334b754607e84dc 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-11-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12035 ecdb6074a5cf25cc0334b754607e84dc 220 SUPERFAMILY SSF53056 1 212 1.24E-75 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12035 ecdb6074a5cf25cc0334b754607e84dc 220 Pfam PF00484 Carbonic anhydrase 37 188 5.8E-50 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 SUPERFAMILY SSF51604 95 359 2.23E-71 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 107 3.6E-29 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 Gene3D G3DSA:3.30.390.10 9 112 6.1E-48 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 11-11-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 11-11-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 70.209 T 11-11-2016 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 Gene3D G3DSA:3.20.20.120 113 349 2.9E-75 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 SMART SM00922 125 230 2.3E-17 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 SUPERFAMILY SSF54826 1 112 4.88E-32 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS14550 61a192829a2307789a7683a226a507e9 382 Pfam PF13378 Enolase C-terminal domain-like 130 355 5.0E-54 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 Pfam PF02743 Cache domain 55 309 2.3E-15 T 11-11-2016 IPR033479 Double Cache domain 1 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 SMART SM00331 437 652 1.4E-44 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 SUPERFAMILY SSF81606 449 652 8.63E-8 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 Pfam PF00672 HAMP domain 324 397 6.8E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 SUPERFAMILY SSF103190 154 224 8.63E-5 T 11-11-2016 IPR029151 Periplasmic sensor domain-like ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 SMART SM00304 347 400 1.4E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 465 652 5.2E-46 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 Gene3D G3DSA:3.30.450.20 144 213 6.0E-7 T 11-11-2016 ATY42_RS21395 0693bfe105ae9603dd2d62f0009d4f3e 668 SUPERFAMILY SSF158472 347 398 5.89E-9 T 11-11-2016 ATY42_RS17290 42ccfacd85533e67b70f95210b8a3416 141 Pfam PF02661 Fic/DOC family 7 85 8.4E-12 T 11-11-2016 IPR003812 Fido domain ATY42_RS17290 42ccfacd85533e67b70f95210b8a3416 141 PIRSF PIRSF018297 1 133 6.1E-37 T 11-11-2016 IPR006440 Death on curing protein GO:0016301 ATY42_RS17290 42ccfacd85533e67b70f95210b8a3416 141 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 12 112 4.5E-13 T 11-11-2016 IPR006440 Death on curing protein GO:0016301 ATY42_RS17290 42ccfacd85533e67b70f95210b8a3416 141 SUPERFAMILY SSF140931 52 105 3.92E-6 T 11-11-2016 IPR003812 Fido domain ATY42_RS09030 2394fd475c83ed83b5a720c247bf8d82 227 Pfam PF01323 DSBA-like thioredoxin domain 2 204 2.7E-38 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 ATY42_RS09030 2394fd475c83ed83b5a720c247bf8d82 227 Gene3D G3DSA:3.40.30.10 2 205 1.9E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS09030 2394fd475c83ed83b5a720c247bf8d82 227 SUPERFAMILY SSF52833 2 211 2.67E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 SUPERFAMILY SSF88659 95 179 1.42E-15 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 Gene3D G3DSA:1.10.1740.10 7 118 3.3E-23 T 11-11-2016 ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 SUPERFAMILY SSF88946 6 115 4.32E-21 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 Gene3D G3DSA:1.10.10.10 119 179 4.0E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 Pfam PF08281 Sigma-70, region 4 123 175 3.8E-11 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 178 1.1E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS15015 337021fce91383dba9cb573dca168e48 193 Pfam PF04542 Sigma-70 region 2 30 93 3.8E-7 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 SUPERFAMILY SSF81296 15 160 5.04E-48 T 11-11-2016 IPR014756 Immunoglobulin E-set ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 Gene3D G3DSA:2.60.40.1180 598 701 1.6E-23 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 Pfam PF00128 Alpha amylase, catalytic domain 200 308 1.4E-7 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 SUPERFAMILY SSF51445 508 585 8.03E-131 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 SUPERFAMILY SSF51445 147 479 8.03E-131 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 Gene3D G3DSA:2.60.40.10 15 164 2.1E-56 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 15 701 0.0 T 11-11-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 SUPERFAMILY SSF51011 598 701 1.15E-19 T 11-11-2016 ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 Gene3D G3DSA:3.20.20.80 165 586 6.2E-119 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 SMART SM00642 190 578 5.6E-6 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00315 79190666a993cc2854862aa8f69b3b36 720 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 20 106 1.2E-20 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Pfam PF00158 Sigma-54 interaction domain 146 312 3.4E-68 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Gene3D G3DSA:1.10.10.60 405 468 7.7E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 SMART SM00382 166 309 1.6E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Gene3D G3DSA:1.10.8.60 319 393 2.0E-22 T 11-11-2016 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 SUPERFAMILY SSF46689 400 468 5.82E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 359 368 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Gene3D G3DSA:3.40.50.300 144 318 9.7E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 232 247 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 SMART SM00448 8 120 6.4E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 SUPERFAMILY SSF52172 9 190 4.7E-37 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Pfam PF02954 Bacterial regulatory protein, Fis family 431 468 2.6E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Pfam PF00072 Response regulator receiver domain 10 117 6.0E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 Gene3D G3DSA:3.40.50.2300 9 125 9.9E-33 T 11-11-2016 ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 SUPERFAMILY SSF52540 146 390 8.32E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22530 43c4894950d2316937a8c9bafb1d2dd2 475 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 10 469 1.4E-221 T 11-11-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 Pfam PF00361 Proton-conducting membrane transporter 130 423 6.8E-75 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 15 472 8.9E-139 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 312 324 2.5E-7 T 11-11-2016 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 2.5E-7 T 11-11-2016 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 78 103 2.5E-7 T 11-11-2016 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 2.5E-7 T 11-11-2016 ATY42_RS16190 a6bb21725403dff754d72d8c5d92fd65 486 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 12 475 17.904 T 11-11-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ATY42_RS11210 1eae433145a4e5d76259429b38d08e28 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11210 1eae433145a4e5d76259429b38d08e28 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS11300 1eae433145a4e5d76259429b38d08e28 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11300 1eae433145a4e5d76259429b38d08e28 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS13950 1eae433145a4e5d76259429b38d08e28 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS13950 1eae433145a4e5d76259429b38d08e28 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07735 1eae433145a4e5d76259429b38d08e28 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07735 1eae433145a4e5d76259429b38d08e28 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 SUPERFAMILY SSF52540 91 251 1.33E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 SUPERFAMILY SSF52540 280 419 1.33E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 Pfam PF09369 Domain of unknown function (DUF1998) 676 782 6.5E-11 T 11-11-2016 IPR018973 DEAD/DEAH-box helicase, putative ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 SMART SM00490 325 413 4.2E-16 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 Gene3D G3DSA:3.40.50.300 308 431 1.1E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 Pfam PF00270 DEAD/DEAH box helicase 81 249 6.3E-27 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 Gene3D G3DSA:3.40.50.300 63 255 2.2E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 Pfam PF00271 Helicase conserved C-terminal domain 308 412 5.4E-14 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS00720 0a80a39ddb2182ba9927b755a12193b1 831 SMART SM00487 75 279 2.4E-29 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS07710 14f8e675e9a3529f5b47758b1d9e430f 403 Pfam PF13546 DDE superfamily endonuclease 1 255 1.4E-84 T 11-11-2016 ATY42_RS07710 14f8e675e9a3529f5b47758b1d9e430f 403 SUPERFAMILY SSF53098 20 367 9.86E-26 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21895 c959d29f0356b6164eb5b3f7f2bf9a36 141 SUPERFAMILY SSF53850 57 133 3.69E-6 T 11-11-2016 ATY42_RS21895 c959d29f0356b6164eb5b3f7f2bf9a36 141 Gene3D G3DSA:1.10.10.10 12 74 8.5E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18370 25bbc7767a0a17a8f78da818baf51e18 318 Pfam PF00665 Integrase core domain 173 267 1.9E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS18370 25bbc7767a0a17a8f78da818baf51e18 318 SUPERFAMILY SSF53098 163 307 2.58E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS18370 25bbc7767a0a17a8f78da818baf51e18 318 Pfam PF13936 Helix-turn-helix domain 3 45 3.0E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS18370 25bbc7767a0a17a8f78da818baf51e18 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15935 5ef4e2cd7f3cd4feeeb0ab1bdddd37c3 349 Pfam PF13692 Glycosyl transferases group 1 171 274 9.7E-8 T 11-11-2016 ATY42_RS15935 5ef4e2cd7f3cd4feeeb0ab1bdddd37c3 349 SUPERFAMILY SSF53756 50 292 2.28E-15 T 11-11-2016 ATY42_RS01940 46cf54a33cf7d330b734a6a4b44d179b 529 Pfam PF08811 Protein of unknown function (DUF1800) 52 527 8.4E-129 T 11-11-2016 IPR014917 Protein of unknown function DUF1800 ATY42_RS10235 aa21cdd6e507e268b259d43f6434bece 182 SUPERFAMILY SSF53098 12 146 3.19E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10235 aa21cdd6e507e268b259d43f6434bece 182 Pfam PF01609 Transposase DDE domain 71 132 1.6E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 Pfam PF14489 QueF-like protein 183 255 3.7E-26 T 11-11-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 Gene3D G3DSA:3.30.1130.10 15 124 2.1E-39 T 11-11-2016 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 PIRSF PIRSF004750 1 271 1.7E-109 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 15 123 3.5E-44 T 11-11-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 271 134.464 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 SUPERFAMILY SSF55620 173 253 8.15E-9 T 11-11-2016 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 TIGRFAM TIGR03138 QueF: queuine synthase 4 271 1.9E-110 T 11-11-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ATY42_RS21070 e9421741f65c613aba5229563c27f676 271 Gene3D G3DSA:3.30.1130.10 135 258 8.7E-47 T 11-11-2016 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 918 3.7E-204 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Gene3D G3DSA:2.40.170.20 575 918 2.3E-67 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Gene3D G3DSA:2.40.170.20 289 401 2.3E-67 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Gene3D G3DSA:2.40.170.20 175 243 2.3E-67 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Gene3D G3DSA:2.40.170.20 433 527 2.3E-67 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Pfam PF00593 TonB dependent receptor 640 892 4.1E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 SUPERFAMILY SSF56935 35 247 1.76E-76 T 11-11-2016 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 SUPERFAMILY SSF56935 293 505 1.76E-76 T 11-11-2016 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 SUPERFAMILY SSF56935 557 916 1.76E-76 T 11-11-2016 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 174 8.2E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS19080 be35e92ef88e47b3f0d4009d75e66c52 918 Gene3D G3DSA:2.170.130.10 41 174 4.6E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS16655 a948d22048ea4a168f04058d2f6f472f 371 SUPERFAMILY SSF46565 188 249 9.42E-6 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS16655 a948d22048ea4a168f04058d2f6f472f 371 Gene3D G3DSA:1.10.287.110 182 249 1.2E-5 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 390 50.942 T 11-11-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.8E-46 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 SUPERFAMILY SSF52540 84 363 9.09E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 164 172 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 SMART SM00487 28 235 9.4E-57 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 SMART SM00490 271 352 1.0E-31 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 Gene3D G3DSA:3.40.50.300 9 224 8.4E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 Gene3D G3DSA:3.40.50.300 225 384 3.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 Pfam PF00271 Helicase conserved C-terminal domain 245 352 8.8E-28 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS21595 d49fd64667bb63873c387d893553978d 574 Pfam PF12300 Protein of unknown function (DUF3628) 377 551 1.3E-66 T 11-11-2016 IPR022077 ATP-dependent RNA helicase RhlB GO:0016817 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 Gene3D G3DSA:3.30.43.10 8 94 4.0E-24 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 Pfam PF01565 FAD binding domain 40 178 3.2E-38 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 459 8.8E-55 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 Gene3D G3DSA:3.30.465.10 97 214 2.4E-36 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 SUPERFAMILY SSF56176 9 216 5.09E-66 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 SUPERFAMILY SSF55103 189 460 5.89E-56 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ATY42_RS10425 76639a5bf07bbffdfb56d6cd72e4517d 472 Gene3D G3DSA:1.10.45.10 420 459 2.9E-10 T 11-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ATY42_RS02360 2823809d005f93f78682c5fba1e5e623 113 Pfam PF07578 Lipid A Biosynthesis N-terminal domain 26 97 5.8E-21 T 11-11-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS02360 2823809d005f93f78682c5fba1e5e623 113 ProDom PD339292 LIPID A SYNTHASE LIPID-A-DISACCHARIDE TRANSFERASE GLYCOSYLTRANSFERASE BIOSYNTHESIS N-TERMINAL BIOSYNTHESIS SYNTHESIS 21 104 9.0E-42 T 11-11-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS02360 2823809d005f93f78682c5fba1e5e623 113 PIRSF PIRSF028440 3 113 5.0E-47 T 11-11-2016 IPR014546 Uncharacterised conserved protein, lipid A biosynthesis ATY42_RS02360 2823809d005f93f78682c5fba1e5e623 113 SMART SM01259 26 99 7.4E-22 T 11-11-2016 IPR011499 Lipid A biosynthesis GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 6.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 6.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 6.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 6.2E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 191 2.1E-18 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 Gene3D G3DSA:3.40.50.1000 11 27 1.8E-39 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 Gene3D G3DSA:3.40.50.1000 95 229 1.8E-39 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 Gene3D G3DSA:1.10.150.240 28 88 2.8E-4 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 191 9.0E-25 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07110 e91c1753e2af218120a1640a59320b2d 234 SUPERFAMILY SSF56784 12 227 2.51E-49 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS00190 4a3e995aef11e311a59366b67be96cfa 271 Pfam PF12762 ISXO2-like transposase domain 148 270 9.6E-22 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00190 4a3e995aef11e311a59366b67be96cfa 271 SMART SM01126 148 270 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00190 4a3e995aef11e311a59366b67be96cfa 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS05230 543b2a2b6f03dc4d959eef03994bff6c 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS05230 543b2a2b6f03dc4d959eef03994bff6c 411 Pfam PF01610 Transposase 155 390 3.7E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS04720 543b2a2b6f03dc4d959eef03994bff6c 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS04720 543b2a2b6f03dc4d959eef03994bff6c 411 Pfam PF01610 Transposase 155 390 3.7E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS13280 451f21a1679fbed25976c0d722dd495c 95 Pfam PF01809 Haemolytic domain 12 77 2.8E-28 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor ATY42_RS13280 451f21a1679fbed25976c0d722dd495c 95 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 10 78 24.869 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor ATY42_RS13280 451f21a1679fbed25976c0d722dd495c 95 SMART SM01234 10 77 9.2E-43 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor ATY42_RS13280 451f21a1679fbed25976c0d722dd495c 95 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 14 84 6.6E-27 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor ATY42_RS13280 451f21a1679fbed25976c0d722dd495c 95 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 25 77 4.0E-24 T 11-11-2016 IPR002696 Putative membrane protein insertion efficiency factor ATY42_RS10525 9ede6e980727d7b36a8fc78eb9e720d3 301 Pfam PF02616 Segregation and condensation protein ScpA 64 274 3.0E-28 T 11-11-2016 IPR003768 Segregation and condensation protein A ATY42_RS10525 9ede6e980727d7b36a8fc78eb9e720d3 301 Hamap MF_01805 Segregation and condensation protein A [scpA]. 47 277 21.959 T 11-11-2016 IPR003768 Segregation and condensation protein A ATY42_RS12560 61e2102e4c99068268a5e1654dd6f497 401 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 21 383 1.7E-132 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS12560 61e2102e4c99068268a5e1654dd6f497 401 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 22 379 73.226 T 11-11-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS12560 61e2102e4c99068268a5e1654dd6f497 401 Gene3D G3DSA:3.20.20.70 125 363 3.7E-15 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS12560 61e2102e4c99068268a5e1654dd6f497 401 PIRSF PIRSF006004 17 392 5.5E-146 T 11-11-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS12560 61e2102e4c99068268a5e1654dd6f497 401 Pfam PF04055 Radical SAM superfamily 129 300 5.0E-18 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS12560 61e2102e4c99068268a5e1654dd6f497 401 SUPERFAMILY SSF102114 121 351 2.75E-15 T 11-11-2016 ATY42_RS14190 40ac5def1ea3fa89990a7d0de96727f3 780 SUPERFAMILY SSF58104 454 736 1.7E-70 T 11-11-2016 ATY42_RS14190 40ac5def1ea3fa89990a7d0de96727f3 780 SMART SM00283 487 734 6.1E-88 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14190 40ac5def1ea3fa89990a7d0de96727f3 780 Gene3D G3DSA:1.10.287.950 502 706 5.0E-61 T 11-11-2016 ATY42_RS14190 40ac5def1ea3fa89990a7d0de96727f3 780 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 539 733 5.0E-61 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14190 40ac5def1ea3fa89990a7d0de96727f3 780 SUPERFAMILY SSF55785 255 382 9.25E-9 T 11-11-2016 IPR000014 PAS domain ATY42_RS14190 40ac5def1ea3fa89990a7d0de96727f3 780 Gene3D G3DSA:3.30.450.20 269 386 2.5E-9 T 11-11-2016 ATY42_RS04475 a559a014a2e75f11aa35404664c43025 218 Gene3D G3DSA:3.40.50.150 4 210 6.1E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS04475 a559a014a2e75f11aa35404664c43025 218 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 9 175 2.6E-31 T 11-11-2016 ATY42_RS04475 a559a014a2e75f11aa35404664c43025 218 SUPERFAMILY SSF53335 3 181 3.68E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22715 38bcdbbb948ddd4542877d610511da57 87 Pfam PF01527 Transposase 2 70 2.1E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS22715 38bcdbbb948ddd4542877d610511da57 87 SUPERFAMILY SSF46689 2 68 9.86E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS22715 38bcdbbb948ddd4542877d610511da57 87 Gene3D G3DSA:1.10.10.60 7 83 1.2E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Pfam PF00486 Transcriptional regulatory protein, C terminal 27 102 3.4E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Gene3D G3DSA:1.10.10.10 6 104 9.1E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 SUPERFAMILY SSF82171 223 545 5.69E-34 T 11-11-2016 ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 SUPERFAMILY SSF46894 2 103 5.95E-17 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 SUPERFAMILY SSF69304 464 752 3.14E-14 T 11-11-2016 ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Gene3D G3DSA:2.120.10.30 223 456 1.2E-43 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Pfam PF07676 WD40-like Beta Propeller Repeat 376 397 0.002 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Pfam PF07676 WD40-like Beta Propeller Repeat 225 248 0.077 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Pfam PF07676 WD40-like Beta Propeller Repeat 497 532 3.0E-8 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Pfam PF07676 WD40-like Beta Propeller Repeat 273 304 1.6E-4 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 SMART SM00862 26 102 2.2E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS04560 9cc50325a19aa240c283546f0db2a67b 783 Gene3D G3DSA:2.120.10.60 491 682 1.1E-14 T 11-11-2016 ATY42_RS09165 cd655770b2bc62dbc7d94ab2a44b7885 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 9.8E-5 T 11-11-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria ATY42_RS09165 cd655770b2bc62dbc7d94ab2a44b7885 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 9.8E-5 T 11-11-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria ATY42_RS09165 cd655770b2bc62dbc7d94ab2a44b7885 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 11-11-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site ATY42_RS09165 cd655770b2bc62dbc7d94ab2a44b7885 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 12 66 2.1E-17 T 11-11-2016 IPR012783 Zinc finger, C4 DksA/TraR-type ATY42_RS09165 cd655770b2bc62dbc7d94ab2a44b7885 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 65 5.5E-12 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ATY42_RS09165 cd655770b2bc62dbc7d94ab2a44b7885 88 SUPERFAMILY SSF57716 38 72 3.71E-8 T 11-11-2016 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 11-11-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 PIRSF PIRSF001365 2 298 1.2E-82 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 SUPERFAMILY SSF51569 3 286 8.69E-86 T 11-11-2016 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 2.7E-26 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.7E-26 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 2.7E-26 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 2.7E-26 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 SMART SM01130 2 289 1.1E-108 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 11-11-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 Gene3D G3DSA:3.20.20.70 3 288 8.1E-98 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 279 2.4E-80 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 Pfam PF00701 Dihydrodipicolinate synthetase family 3 284 4.5E-77 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS14575 6316381c6c0ee0401c6e162ae7634027 302 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 287 54.731 T 11-11-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 118 131 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 219 232 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 363 383 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 386 400 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 152 167 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 323 336 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 64 83 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 PRINTS PR00733 Glycosyl hydrolase family 6 signature 259 269 8.5E-34 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 SUPERFAMILY SSF49265 467 563 1.93E-11 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 Gene3D G3DSA:2.60.40.10 483 564 2.5E-17 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 Pfam PF01341 Glycosyl hydrolases family 6 58 409 5.5E-99 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 SMART SM00060 478 556 0.0089 T 11-11-2016 IPR003961 Fibronectin type III GO:0005515 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 SUPERFAMILY SSF51989 35 457 6.28E-116 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS20270 c6001392511fbaaf9f73cea0046506c2 566 Gene3D G3DSA:3.20.20.40 30 462 2.2E-128 T 11-11-2016 IPR016288 1, 4-beta cellobiohydrolase GO:0004553|GO:0030245 ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 SUPERFAMILY SSF51556 51 295 4.54E-27 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 Gene3D G3DSA:3.20.20.140 169 305 9.1E-22 T 11-11-2016 ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 Gene3D G3DSA:2.30.40.10 306 339 2.1E-5 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 Pfam PF01979 Amidohydrolase family 157 327 1.8E-9 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 SUPERFAMILY SSF51338 298 348 1.33E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 SUPERFAMILY SSF51338 3 52 1.33E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS14940 73617f1a1ddf50f624f1c4bbace3ff24 411 Gene3D G3DSA:2.30.40.10 2 61 1.7E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS18210 4c6410a083803eeb8fb7709f760e10a2 88 Gene3D G3DSA:3.30.70.100 1 85 2.1E-24 T 11-11-2016 ATY42_RS18210 4c6410a083803eeb8fb7709f760e10a2 88 Pfam PF00708 Acylphosphatase 1 85 7.1E-20 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ATY42_RS18210 4c6410a083803eeb8fb7709f760e10a2 88 SUPERFAMILY SSF54975 1 86 3.27E-24 T 11-11-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 Pfam PF02357 Transcription termination factor nusG 2 116 2.9E-22 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 185 23.008 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 SMART SM00739 131 158 2.6E-5 T 11-11-2016 IPR005824 KOW ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 184 2.6E-61 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 PRINTS PR00338 Transcription termination factor NUSG signature 161 177 8.3E-19 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 8.3E-19 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 PRINTS PR00338 Transcription termination factor NUSG signature 143 158 8.3E-19 T 11-11-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 SUPERFAMILY SSF50104 129 184 2.66E-18 T 11-11-2016 IPR008991 Translation protein SH3-like domain ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 Pfam PF00467 KOW motif 134 168 2.8E-7 T 11-11-2016 IPR005824 KOW ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 SMART SM00738 1 119 5.1E-43 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 SUPERFAMILY SSF82679 2 121 2.49E-35 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 Gene3D G3DSA:3.30.70.940 2 121 3.9E-40 T 11-11-2016 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 Gene3D G3DSA:2.30.30.30 124 184 4.9E-30 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 ATY42_RS18105 d2ce72a301cdcc8ee48e54a54daf08ca 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 168 177 - T 11-11-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 Gene3D G3DSA:3.90.550.10 573 788 6.5E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 SUPERFAMILY SSF53756 899 1164 9.42E-9 T 11-11-2016 ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 Pfam PF00535 Glycosyl transferase family 2 586 754 1.8E-11 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 Pfam PF00535 Glycosyl transferase family 2 16 137 8.5E-17 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 Gene3D G3DSA:3.90.550.10 14 240 3.5E-35 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 SUPERFAMILY SSF53448 561 792 3.42E-28 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS12885 438cf67cc0e7c278dc4c3519e68c25f2 1183 SUPERFAMILY SSF53448 14 240 6.06E-34 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS10345 4a3a884a44ebf66fb05266c64ecc13fd 1172 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 710 911 8.1E-115 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS10345 4a3a884a44ebf66fb05266c64ecc13fd 1172 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 327 538 2.1E-136 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 Pfam PF00691 OmpA family 125 220 1.2E-25 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 SUPERFAMILY SSF103088 113 229 5.62E-41 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 Pfam PF13488 Glycine zipper 50 95 7.7E-11 T 11-11-2016 ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 ProSitePatterns PS01068 OmpA-like domain. 158 202 - T 11-11-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 PRINTS PR01021 OMPA domain signature 156 171 2.6E-17 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 PRINTS PR01021 OMPA domain signature 126 148 2.6E-17 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 PRINTS PR01021 OMPA domain signature 171 187 2.6E-17 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS07505 9ec73cc7fc6a93273fbb8c948308aa7e 241 Gene3D G3DSA:3.30.1330.60 104 226 1.2E-42 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 Pfam PF02272 DHHA1 domain 806 871 4.9E-11 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 211 222 4.0E-32 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 238 251 4.0E-32 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 4.0E-32 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 4.0E-32 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 PRINTS PR00980 Alanyl-tRNA synthetase signature 80 91 4.0E-32 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 SUPERFAMILY SSF55681 7 257 1.04E-105 T 11-11-2016 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 881 194.175 T 11-11-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 SUPERFAMILY SSF101353 258 447 5.23E-59 T 11-11-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 Pfam PF01411 tRNA synthetases class II (A) 11 561 4.9E-213 T 11-11-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 659 702 1.7E-17 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 SUPERFAMILY SSF55186 558 716 3.4E-53 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 SUPERFAMILY SSF50447 458 554 6.06E-17 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 12 860 1.4E-303 T 11-11-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 Gene3D G3DSA:3.30.930.10 7 253 8.2E-120 T 11-11-2016 ATY42_RS14690 1eab1b3400959cafb68d66eee7e69fbf 882 SMART SM00863 659 702 5.2E-22 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ATY42_RS07870 a1437bdb564e9dbb6365a3df37057ca0 592 SUPERFAMILY SSF48208 204 588 2.72E-88 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS07870 a1437bdb564e9dbb6365a3df37057ca0 592 Pfam PF00723 Glycosyl hydrolases family 15 220 522 5.1E-22 T 11-11-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 ATY42_RS07870 a1437bdb564e9dbb6365a3df37057ca0 592 Gene3D G3DSA:1.50.10.10 217 588 8.3E-85 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 ATY42_RS18775 e36bb3f1cc9e4e79113b316fd4a24d00 275 SUPERFAMILY SSF52096 4 259 2.33E-69 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS18775 e36bb3f1cc9e4e79113b316fd4a24d00 275 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 7.6E-49 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS18775 e36bb3f1cc9e4e79113b316fd4a24d00 275 Gene3D G3DSA:3.90.226.10 4 258 2.4E-67 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 PIRSF PIRSF036761 1 1674 0.0 T 11-11-2016 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 Pfam PF12466 Glutamate dehydrogenase N terminal 1 95 7.9E-41 T 11-11-2016 IPR024727 Bacterial NAD-glutamate dehydrogenase, N-terminal ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 SUPERFAMILY SSF51735 1152 1280 2.3E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 SUPERFAMILY SSF51735 1012 1114 2.3E-31 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 SUPERFAMILY SSF53223 817 1008 1.15E-19 T 11-11-2016 ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 Gene3D G3DSA:3.40.50.720 1009 1120 5.6E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 Gene3D G3DSA:3.40.50.720 1177 1263 5.6E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13885 ac2c2846767a317663b5d53ebb24d542 1674 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 99 1667 0.0 T 11-11-2016 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 ATY42_RS18670 a100daf25eff543c4242ff58586143d9 78 Gene3D G3DSA:3.30.70.790 6 70 3.8E-4 T 11-11-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 ATY42_RS18670 a100daf25eff543c4242ff58586143d9 78 Pfam PF09413 Putative prokaryotic signal transducing protein 1 66 1.5E-11 T 11-11-2016 IPR018551 Domain of unknown function DUF2007 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 142 157 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 TIGRFAM TIGR01102 yscR: type III secretion apparatus protein, YscR/HrcR family 9 209 2.7E-89 T 11-11-2016 IPR005773 Yop virulence translocation protein R GO:0015031|GO:0016021 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 Pfam PF00813 FliP family 13 209 3.0E-63 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 190 202 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 10 29 8.7E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 29 49 8.7E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 187 212 8.7E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 163 184 8.7E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 49 68 8.7E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS00485 bad711ef19906a172cab4fc659f0f701 214 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 142 162 8.7E-64 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Pfam PF08446 PAS fold 13 72 3.9E-12 T 11-11-2016 IPR013654 PAS fold-2 GO:0006355 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Gene3D G3DSA:3.30.450.40 136 308 7.4E-9 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Pfam PF08448 PAS fold 542 632 5.7E-5 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SMART SM00065 144 318 0.0019 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SUPERFAMILY SSF55781 338 511 1.96E-41 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Pfam PF01590 GAF domain 146 296 3.0E-17 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SUPERFAMILY SSF55785 4 120 2.65E-28 T 11-11-2016 IPR000014 PAS domain ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 PRINTS PR01033 Phytochrome signature 159 178 1.1E-18 T 11-11-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 PRINTS PR01033 Phytochrome signature 437 456 1.1E-18 T 11-11-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 PRINTS PR01033 Phytochrome signature 246 267 1.1E-18 T 11-11-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 PRINTS PR01033 Phytochrome signature 345 365 1.1E-18 T 11-11-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 PRINTS PR01033 Phytochrome signature 471 489 1.1E-18 T 11-11-2016 IPR001294 Phytochrome GO:0006355|GO:0009584 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Pfam PF00360 Phytochrome region 325 510 5.0E-53 T 11-11-2016 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Gene3D G3DSA:3.30.450.20 32 85 0.001 T 11-11-2016 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 Gene3D G3DSA:3.30.450.20 517 627 2.7E-8 T 11-11-2016 ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SMART SM00091 17 86 5.1 T 11-11-2016 IPR000014 PAS domain ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SMART SM00091 517 588 6.3 T 11-11-2016 IPR000014 PAS domain ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SUPERFAMILY SSF55785 508 632 8.38E-9 T 11-11-2016 IPR000014 PAS domain ATY42_RS01295 d06e60829d6c2b2c0a62a7a0617342d8 634 SUPERFAMILY SSF55781 142 310 2.16E-54 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS20475 cef6ed96f20b864bb2f5081b4d807d08 441 Pfam PF04209 homogentisate 1,2-dioxygenase 6 428 3.4E-206 T 11-11-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 ATY42_RS20475 cef6ed96f20b864bb2f5081b4d807d08 441 Gene3D G3DSA:2.60.120.10 194 219 3.8E-69 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS20475 cef6ed96f20b864bb2f5081b4d807d08 441 Gene3D G3DSA:2.60.120.10 280 398 3.8E-69 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS20475 cef6ed96f20b864bb2f5081b4d807d08 441 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 6 428 2.5E-203 T 11-11-2016 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 ATY42_RS20475 cef6ed96f20b864bb2f5081b4d807d08 441 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 6 430 71.174 T 11-11-2016 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 ATY42_RS20475 cef6ed96f20b864bb2f5081b4d807d08 441 SUPERFAMILY SSF51182 5 430 3.16E-173 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 Gene3D G3DSA:2.30.140.10 5 58 9.8E-16 T 11-11-2016 ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 36.166 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 SUPERFAMILY SSF53335 7 284 1.26E-74 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 83 96 - T 11-11-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 Pfam PF01564 Spermine/spermidine synthase 15 243 3.9E-65 T 11-11-2016 ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 4.5E-80 T 11-11-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ATY42_RS00945 edc3f7782857b2e224a0753e68ab60b2 285 Gene3D G3DSA:3.40.50.150 59 283 9.1E-70 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 10 258 1.9E-103 T 11-11-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 Pfam PF00561 alpha/beta hydrolase fold 22 132 8.9E-12 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 Gene3D G3DSA:3.40.50.1820 2 258 5.2E-55 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 1.4E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.4E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.4E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 105 118 1.4E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS02285 8e3487edd2b1dfa6c9680dd998779c66 260 SUPERFAMILY SSF53474 2 258 1.91E-59 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54768 22 89 1.57E-20 T 11-11-2016 ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.160.20 22 84 3.0E-26 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 176 33.995 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF00333 Ribosomal protein S5, N-terminal domain 26 87 3.8E-25 T 11-11-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 Pfam PF03719 Ribosomal protein S5, C-terminal domain 102 170 4.9E-28 T 11-11-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 24 176 6.4E-64 T 11-11-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 ProSitePatterns PS00585 Ribosomal protein S5 signature. 41 73 - T 11-11-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 SUPERFAMILY SSF54211 92 172 9.1E-25 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS17960 7cdf57728322e036d4ea46c3006cb413 180 Gene3D G3DSA:3.30.230.10 90 172 1.3E-30 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 Pfam PF13566 Domain of unknown function (DUF4130 77 235 1.1E-42 T 11-11-2016 IPR025404 Domain of unknown function DUF4130 ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 SMART SM00987 304 465 1.3E-35 T 11-11-2016 ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 Gene3D G3DSA:3.40.470.10 279 468 1.9E-62 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 SMART SM00986 304 465 1.3E-35 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 SUPERFAMILY SSF52141 278 455 1.08E-53 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 239 466 2.6E-97 T 11-11-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 290 452 2.5E-37 T 11-11-2016 IPR005273 Uracil-DNA glycosylase, family 4 domain ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 10 236 8.4E-66 T 11-11-2016 IPR023875 DNA metabolism protein, putative ATY42_RS03205 90161afccf445b6392b6c4e7aae5a56e 482 Pfam PF03167 Uracil DNA glycosylase superfamily 304 454 1.1E-36 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS22895 84c8eb704b15ed085af74ac4654af123 542 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 57 153 8.2E-27 T 11-11-2016 IPR032093 Phospholipase D, N-terminal ATY42_RS22895 84c8eb704b15ed085af74ac4654af123 542 Gene3D G3DSA:3.60.21.10 174 513 3.6E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS22895 84c8eb704b15ed085af74ac4654af123 542 Pfam PF09423 PhoD-like phosphatase 167 510 2.0E-104 T 11-11-2016 IPR018946 Alkaline phosphatase D-related ATY42_RS22895 84c8eb704b15ed085af74ac4654af123 542 SUPERFAMILY SSF56300 365 512 2.28E-35 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS22895 84c8eb704b15ed085af74ac4654af123 542 SUPERFAMILY SSF56300 164 334 2.28E-35 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 346 8.7E-68 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 PRINTS PR01005 Flagellar hook-associated protein signature 48 70 2.0E-19 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 PRINTS PR01005 Flagellar hook-associated protein signature 10 33 2.0E-19 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 PRINTS PR01005 Flagellar hook-associated protein signature 155 179 2.0E-19 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 PRINTS PR01005 Flagellar hook-associated protein signature 122 142 2.0E-19 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 PRINTS PR01005 Flagellar hook-associated protein signature 403 420 2.0E-19 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 PRINTS PR01005 Flagellar hook-associated protein signature 353 375 2.0E-19 T 11-11-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 SUPERFAMILY SSF64518 433 621 4.32E-27 T 11-11-2016 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 563 620 1.1E-12 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 SUPERFAMILY SSF64518 131 439 2.22E-24 T 11-11-2016 ATY42_RS12785 cf549fea374ef0d613c7d3673fd7fd51 624 Pfam PF00460 Flagella basal body rod protein 4 33 7.0E-9 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATY42_RS05490 9e4d8d75875c7976f80206f50dc06ef5 196 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 7 184 4.5E-30 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ATY42_RS05490 9e4d8d75875c7976f80206f50dc06ef5 196 PIRSF PIRSF006806 1 187 1.6E-28 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ATY42_RS05490 9e4d8d75875c7976f80206f50dc06ef5 196 SUPERFAMILY SSF100950 4 190 1.0E-47 T 11-11-2016 ATY42_RS05490 9e4d8d75875c7976f80206f50dc06ef5 196 Gene3D G3DSA:3.40.50.10420 5 186 2.2E-45 T 11-11-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain ATY42_RS05490 9e4d8d75875c7976f80206f50dc06ef5 196 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 6 184 1.1E-45 T 11-11-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 SUPERFAMILY SSF56672 1 233 1.07E-91 T 11-11-2016 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 Gene3D G3DSA:3.30.1490.100 240 345 6.2E-25 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 Gene3D G3DSA:1.10.150.20 165 234 1.8E-23 T 11-11-2016 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 SUPERFAMILY SSF100879 239 338 1.88E-20 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 Hamap MF_01113 DNA polymerase IV [dinB]. 1 351 37.303 T 11-11-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 Pfam PF00817 impB/mucB/samB family 7 153 2.6E-52 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 Gene3D G3DSA:3.30.70.270 65 163 1.5E-35 T 11-11-2016 ATY42_RS03675 6521bf2c6f6a0449df56988a6534cd37 359 Pfam PF11799 impB/mucB/samB family C-terminal domain 234 346 5.9E-17 T 11-11-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATY42_RS11550 3bd9c4e8e0ea38e45d4b296b3359c491 324 SUPERFAMILY SSF55073 171 322 4.24E-40 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS11550 3bd9c4e8e0ea38e45d4b296b3359c491 324 Pfam PF00990 Diguanylate cyclase, GGDEF domain 166 318 8.6E-37 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS11550 3bd9c4e8e0ea38e45d4b296b3359c491 324 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 162 323 1.3E-40 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS11550 3bd9c4e8e0ea38e45d4b296b3359c491 324 Gene3D G3DSA:3.30.70.270 168 322 3.3E-44 T 11-11-2016 ATY42_RS11550 3bd9c4e8e0ea38e45d4b296b3359c491 324 SMART SM00267 155 323 3.9E-50 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07030 6e5264c66ebbf0a78470682075dfd2b1 293 PIRSF PIRSF016184 1 292 6.4E-69 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS07030 6e5264c66ebbf0a78470682075dfd2b1 293 SUPERFAMILY SSF54506 4 290 1.07E-61 T 11-11-2016 ATY42_RS07030 6e5264c66ebbf0a78470682075dfd2b1 293 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 275 4.5E-52 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS07030 6e5264c66ebbf0a78470682075dfd2b1 293 Gene3D G3DSA:3.10.310.10 2 131 2.7E-37 T 11-11-2016 ATY42_RS07030 6e5264c66ebbf0a78470682075dfd2b1 293 Pfam PF02567 Phenazine biosynthesis-like protein 9 271 3.4E-51 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS07030 6e5264c66ebbf0a78470682075dfd2b1 293 Gene3D G3DSA:3.10.310.10 132 281 1.2E-33 T 11-11-2016 ATY42_RS06295 3014d7aaac2e56f0ebaf42451edb6b4e 105 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 8.3E-26 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS06295 3014d7aaac2e56f0ebaf42451edb6b4e 105 SUPERFAMILY SSF69754 1 99 3.27E-30 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS06295 3014d7aaac2e56f0ebaf42451edb6b4e 105 Gene3D G3DSA:3.30.160.100 1 95 1.1E-29 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS06295 3014d7aaac2e56f0ebaf42451edb6b4e 105 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 4.2E-23 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 Pfam PF04552 Sigma-54, DNA binding domain 320 477 1.2E-63 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 PIRSF PIRSF000774 1 479 1.0E-137 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 Pfam PF04963 Sigma-54 factor, core binding domain 113 306 3.6E-49 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 475 4.8E-150 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 48 1.1E-17 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 457 464 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 PRINTS PR00045 Sigma-54 factor signature 378 390 1.3E-26 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 PRINTS PR00045 Sigma-54 factor signature 452 470 1.3E-26 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 PRINTS PR00045 Sigma-54 factor signature 394 405 1.3E-26 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 PRINTS PR00045 Sigma-54 factor signature 188 205 1.3E-26 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS06300 5f61f6bbefccac6cb02ea000bd5e753f 479 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 366 385 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 95 256 2.2E-49 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 SUPERFAMILY SSF55174 26 114 1.91E-16 T 11-11-2016 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 SUPERFAMILY SSF55120 87 260 3.84E-36 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 Pfam PF00849 RNA pseudouridylate synthase 91 226 8.4E-16 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 Pfam PF01479 S4 domain 28 73 1.1E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 SMART SM00363 28 86 2.2E-10 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 129 143 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS10515 239c25bdf7901bbc7680938bd10741d0 546 Gene3D G3DSA:3.10.290.10 28 80 4.8E-15 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS06500 2101fdcc19a71101e36e688b4c274a88 356 Gene3D G3DSA:3.20.20.70 11 334 2.2E-46 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS06500 2101fdcc19a71101e36e688b4c274a88 356 Pfam PF03060 Nitronate monooxygenase 19 344 4.2E-59 T 11-11-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ATY42_RS06500 2101fdcc19a71101e36e688b4c274a88 356 SUPERFAMILY SSF51412 13 335 1.13E-46 T 11-11-2016 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 SUPERFAMILY SSF160996 196 350 8.24E-8 T 11-11-2016 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 403 1.3E-102 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 Gene3D G3DSA:3.50.50.60 284 285 6.6E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 Gene3D G3DSA:3.50.50.60 5 193 6.6E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 Gene3D G3DSA:3.50.50.60 371 404 6.6E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 TIGRFAM TIGR03862 flavo_PP4765: flavoprotein, TIGR03862 family 29 410 1.8E-190 T 11-11-2016 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 Pfam PF03486 HI0933-like protein 9 403 4.3E-104 T 11-11-2016 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 6.7E-5 T 11-11-2016 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 370 385 6.7E-5 T 11-11-2016 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 SUPERFAMILY SSF51905 9 197 3.46E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15460 5324f0c60ffe7ae711dc1eecb0161897 420 SUPERFAMILY SSF51905 349 409 3.46E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 SUPERFAMILY SSF53732 3 474 7.72E-162 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 Gene3D G3DSA:3.30.499.10 341 472 4.8E-59 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 ProSitePatterns PS00450 Aconitase family signature 1. 345 361 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 349 360 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 114 122 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 215 228 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 139 154 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 88 101 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 125 138 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 201 214 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 292 306 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 PRINTS PR00415 Aconitase family signature 406 419 1.6E-47 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 Pfam PF00330 Aconitase family (aconitate hydratase) 8 464 7.7E-154 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 Gene3D G3DSA:3.30.499.10 3 163 8.6E-21 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 ProSitePatterns PS01244 Aconitase family signature 2. 406 419 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 Gene3D G3DSA:3.40.1060.10 173 285 1.8E-39 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 3 472 2.2E-233 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ATY42_RS04505 24dd955e0a6bea9924b538fa72480187 482 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 473 61.415 T 11-11-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 487 621 8.5E-22 T 11-11-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Gene3D G3DSA:3.40.50.720 479 650 7.7E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 SUPERFAMILY SSF55347 629 812 4.18E-48 T 11-11-2016 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 PIRSF PIRSF000727 20 832 0.0 T 11-11-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 20 474 3.1E-106 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Pfam PF13840 ACT domain 328 389 3.2E-7 T 11-11-2016 IPR027795 GATS-like ACT domain ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Pfam PF13840 ACT domain 409 469 1.7E-7 T 11-11-2016 IPR027795 GATS-like ACT domain ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 ProSitePatterns PS00324 Aspartokinase signature. 22 30 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Gene3D G3DSA:3.30.360.10 651 807 1.2E-55 T 11-11-2016 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 SUPERFAMILY SSF55021 320 396 1.02E-19 T 11-11-2016 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Pfam PF00696 Amino acid kinase family 20 300 1.1E-43 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 SUPERFAMILY SSF51735 479 651 6.26E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 SUPERFAMILY SSF55021 402 488 4.58E-21 T 11-11-2016 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Gene3D G3DSA:3.40.1160.10 17 67 6.1E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Gene3D G3DSA:3.40.1160.10 126 314 6.1E-65 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 675 697 - T 11-11-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 SUPERFAMILY SSF53633 21 313 2.71E-73 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS10965 3a8d70d70dbf2282d9ce8e4179f83b8a 835 Pfam PF00742 Homoserine dehydrogenase 629 825 3.2E-50 T 11-11-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ATY42_RS21230 ea6cd559752bd55673efd6088acfccfc 336 SUPERFAMILY SSF51735 1 267 1.94E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21230 ea6cd559752bd55673efd6088acfccfc 336 SUPERFAMILY SSF51735 297 325 1.94E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21230 ea6cd559752bd55673efd6088acfccfc 336 Gene3D G3DSA:3.40.50.720 1 323 1.3E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21230 ea6cd559752bd55673efd6088acfccfc 336 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 4 252 5.6E-49 T 11-11-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-11-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.6E-30 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.2E-51 T 11-11-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.631 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:4.10.910.10 76 118 3.5E-24 T 11-11-2016 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 Gene3D G3DSA:1.10.8.50 1 71 1.9E-27 T 11-11-2016 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 SUPERFAMILY SSF46946 2 114 2.94E-43 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATY42_RS17940 147401c8823158612e31d07ee53431b0 118 PIRSF PIRSF002134 1 118 1.1E-41 T 11-11-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS12255 cbb3f73a30f2d46e2493fbc4bd8bdf10 460 Pfam PF13546 DDE superfamily endonuclease 39 312 2.3E-89 T 11-11-2016 ATY42_RS12255 cbb3f73a30f2d46e2493fbc4bd8bdf10 460 SUPERFAMILY SSF53098 39 424 3.41E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 62 198 2.0E-42 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 187 198 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 SUPERFAMILY SSF49329 53 198 1.96E-41 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 95 105 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 Gene3D G3DSA:2.60.40.200 57 199 5.3E-49 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 173 199 5.8E-7 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 95 117 5.8E-7 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22520 03f687f63e22dc860d47085835b48625 210 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 132 141 5.8E-7 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS18495 57a7733617e7b06cd8e81a7a4198b4ba 247 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 239 9.9E-108 T 11-11-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 ATY42_RS18495 57a7733617e7b06cd8e81a7a4198b4ba 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 206 5.2E-9 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ATY42_RS18495 57a7733617e7b06cd8e81a7a4198b4ba 247 Gene3D G3DSA:3.60.21.10 1 125 6.2E-22 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS18495 57a7733617e7b06cd8e81a7a4198b4ba 247 Gene3D G3DSA:3.60.21.10 180 213 6.2E-22 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS18495 57a7733617e7b06cd8e81a7a4198b4ba 247 SUPERFAMILY SSF56300 1 229 3.65E-32 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS18495 57a7733617e7b06cd8e81a7a4198b4ba 247 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 247 119.521 T 11-11-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 203 4.8E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 SMART SM00421 146 203 1.9E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 SUPERFAMILY SSF46894 144 210 4.76E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 SUPERFAMILY SSF52172 2 132 3.27E-30 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 SMART SM00448 3 116 2.5E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 Gene3D G3DSA:3.40.50.2300 2 120 1.1E-30 T 11-11-2016 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 Gene3D G3DSA:1.10.10.10 121 210 3.3E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 Pfam PF00072 Response regulator receiver domain 5 116 1.7E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 4.4E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 4.4E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS15435 399a0f9a912f40d8f16b1d7ed49d8cf6 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 4.4E-11 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS19180 c23593f7058e1b8a27531c84089bd076 275 Gene3D G3DSA:3.20.20.220 3 274 6.7E-100 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like ATY42_RS19180 c23593f7058e1b8a27531c84089bd076 275 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 4 273 3.5E-102 T 11-11-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 ATY42_RS19180 c23593f7058e1b8a27531c84089bd076 275 Pfam PF02219 Methylenetetrahydrofolate reductase 3 274 1.6E-86 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ATY42_RS19180 c23593f7058e1b8a27531c84089bd076 275 SUPERFAMILY SSF51730 3 274 3.53E-91 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 413 41.355 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 Pfam PF00171 Aldehyde dehydrogenase family 10 287 3.8E-12 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 Gene3D G3DSA:3.40.309.10 224 371 2.8E-38 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 Gene3D G3DSA:3.40.605.10 2 221 1.6E-95 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 Gene3D G3DSA:3.40.605.10 372 413 1.6E-95 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 401 8.2E-138 T 11-11-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 PIRSF PIRSF000151 1 414 1.4E-172 T 11-11-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 SUPERFAMILY SSF53720 6 413 6.81E-110 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS13185 2a14385fd24193e4046eeaf61c4e55eb 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 320 341 - T 11-11-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 PIRSF PIRSF001435 14 225 5.9E-48 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 49 182 1.8E-17 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 Gene3D G3DSA:1.10.1670.10 138 223 6.3E-36 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 Gene3D G3DSA:1.10.340.30 38 137 4.3E-33 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 SUPERFAMILY SSF48150 16 226 3.14E-72 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 Hamap MF_00942 Endonuclease III [nth]. 16 224 37.159 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 Pfam PF00633 Helix-hairpin-helix motif 114 142 8.1E-8 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 TIGRFAM TIGR01083 nth: endonuclease III 20 209 8.5E-86 T 11-11-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 ProSitePatterns PS01155 Endonuclease III family signature. 117 146 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 ATY42_RS12170 03fa4fe253fba669db3487b4e2cb455e 236 SMART SM00478 53 200 1.7E-53 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS09605 69eef1919a816158224992554baafd35 267 Pfam PF00318 Ribosomal protein S2 9 224 4.7E-90 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 Gene3D G3DSA:1.10.287.610 100 152 6.6E-23 T 11-11-2016 ATY42_RS09605 69eef1919a816158224992554baafd35 267 PRINTS PR00395 Ribosomal protein S2 signature 196 210 7.1E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 PRINTS PR00395 Ribosomal protein S2 signature 175 186 7.1E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 PRINTS PR00395 Ribosomal protein S2 signature 6 24 7.1E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 PRINTS PR00395 Ribosomal protein S2 signature 87 104 7.1E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 PRINTS PR00395 Ribosomal protein S2 signature 158 175 7.1E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 PRINTS PR00395 Ribosomal protein S2 signature 37 46 7.1E-36 T 11-11-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-11-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ATY42_RS09605 69eef1919a816158224992554baafd35 267 Gene3D G3DSA:3.40.50.10490 158 243 6.3E-62 T 11-11-2016 ATY42_RS09605 69eef1919a816158224992554baafd35 267 Gene3D G3DSA:3.40.50.10490 23 99 6.3E-62 T 11-11-2016 ATY42_RS09605 69eef1919a816158224992554baafd35 267 SUPERFAMILY SSF52313 6 229 4.58E-89 T 11-11-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain ATY42_RS09605 69eef1919a816158224992554baafd35 267 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 226 2.2E-98 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 ATY42_RS09605 69eef1919a816158224992554baafd35 267 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 39.788 T 11-11-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 ATY42_RS11450 4c5170bb368dfc3d1a96241cac4f52e7 290 Pfam PF01571 Aminomethyltransferase folate-binding domain 20 99 1.6E-5 T 11-11-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal ATY42_RS11450 4c5170bb368dfc3d1a96241cac4f52e7 290 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 202 277 3.7E-6 T 11-11-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ATY42_RS11450 4c5170bb368dfc3d1a96241cac4f52e7 290 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 163 227 7.6E-21 T 11-11-2016 IPR017703 YgfZ/GcvT conserved site ATY42_RS11450 4c5170bb368dfc3d1a96241cac4f52e7 290 Gene3D G3DSA:3.30.70.1400 20 103 8.6E-17 T 11-11-2016 ATY42_RS11450 4c5170bb368dfc3d1a96241cac4f52e7 290 SUPERFAMILY SSF103025 11 218 3.14E-41 T 11-11-2016 ATY42_RS18415 8ee0dcf0155a498ab981ede7b4022a2a 192 Gene3D G3DSA:3.40.50.880 1 170 1.7E-27 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS18415 8ee0dcf0155a498ab981ede7b4022a2a 192 SUPERFAMILY SSF52317 1 170 5.5E-29 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS18415 8ee0dcf0155a498ab981ede7b4022a2a 192 Pfam PF01965 DJ-1/PfpI family 4 168 2.0E-17 T 11-11-2016 IPR002818 DJ-1/PfpI ATY42_RS06850 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06850 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS06850 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01340 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01340 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS01340 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04705 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04705 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS04705 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06805 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06805 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS06805 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS18630 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS18630 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS18630 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20365 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20365 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS20365 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS19590 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS19590 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS19590 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11835 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11835 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS11835 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03990 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03990 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS03990 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02460 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02460 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS02460 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08115 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08115 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS08115 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20880 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20880 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS20880 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20985 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20985 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS20985 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04915 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04915 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS04915 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS05430 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS05430 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS05430 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17895 98b80ac9c404d11587c0c9dcc854a756 87 SUPERFAMILY SSF46689 2 66 3.58E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17895 98b80ac9c404d11587c0c9dcc854a756 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS17895 98b80ac9c404d11587c0c9dcc854a756 87 Gene3D G3DSA:1.10.10.60 7 83 6.4E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 SUPERFAMILY SSF102114 13 291 8.76E-69 T 11-11-2016 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 SMART SM00729 23 243 2.1E-4 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 11-11-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 343 5.6E-104 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 Pfam PF04055 Radical SAM superfamily 28 190 3.8E-25 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 Pfam PF06463 Molybdenum Cofactor Synthesis C 200 322 3.5E-33 T 11-11-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 Gene3D G3DSA:3.20.20.70 13 301 3.1E-72 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 Pfam PF13353 4Fe-4S single cluster domain 31 117 9.1E-6 T 11-11-2016 ATY42_RS05105 3ecc4782d4126fd445c81212e8614938 343 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 14 343 38.985 T 11-11-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 SUPERFAMILY SSF48179 176 282 6.29E-34 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 Gene3D G3DSA:3.40.50.720 18 174 2.4E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 18 113 8.9E-18 T 11-11-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 19 281 1.9E-84 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 SUPERFAMILY SSF51735 18 174 7.59E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 Gene3D G3DSA:1.10.3730.10 176 280 1.0E-36 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 PIRSF PIRSF000193 16 284 7.4E-70 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 17 281 26.368 T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 236 259 - T 11-11-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 ATY42_RS06945 32b4894d94a08f713b264561a72b1e1a 286 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 177 280 2.5E-34 T 11-11-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ATY42_RS05965 bf4bf5d5bd3e08b039a7601a96d69d13 141 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 46 119 1.7E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS05965 bf4bf5d5bd3e08b039a7601a96d69d13 141 Gene3D G3DSA:1.10.760.10 13 130 5.9E-17 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS05965 bf4bf5d5bd3e08b039a7601a96d69d13 141 SUPERFAMILY SSF46626 1 129 1.48E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 Pfam PF00202 Aminotransferase class-III 45 465 8.4E-116 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 Gene3D G3DSA:3.40.640.10 83 362 5.9E-92 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 SUPERFAMILY SSF53383 26 466 4.63E-123 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 274 311 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 31 465 3.6E-165 T 11-11-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 PIRSF PIRSF000521 37 440 3.2E-27 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 Gene3D G3DSA:3.90.1150.10 365 468 2.5E-51 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS08690 aa6b90abefa8350c07fc2439f82bd0f8 472 Gene3D G3DSA:3.90.1150.10 21 82 2.5E-51 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS21060 1c9912f2e190614ed65c74f7c8754bac 323 Pfam PF13936 Helix-turn-helix domain 19 50 4.3E-12 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS21060 1c9912f2e190614ed65c74f7c8754bac 323 Pfam PF00665 Integrase core domain 182 272 5.4E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS21060 1c9912f2e190614ed65c74f7c8754bac 323 Gene3D G3DSA:3.30.420.10 170 312 7.7E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21060 1c9912f2e190614ed65c74f7c8754bac 323 SUPERFAMILY SSF53098 170 312 4.7E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS03860 a317ff9a6459c2c73e812231e552ec7a 209 Pfam PF01144 Coenzyme A transferase 7 195 5.4E-42 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ATY42_RS03860 a317ff9a6459c2c73e812231e552ec7a 209 Gene3D G3DSA:3.40.810.20 3 208 5.1E-94 T 11-11-2016 ATY42_RS03860 a317ff9a6459c2c73e812231e552ec7a 209 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 11-11-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 ATY42_RS03860 a317ff9a6459c2c73e812231e552ec7a 209 SMART SM00882 6 202 3.1E-80 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ATY42_RS03860 a317ff9a6459c2c73e812231e552ec7a 209 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 208 2.7E-100 T 11-11-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 ATY42_RS03860 a317ff9a6459c2c73e812231e552ec7a 209 SUPERFAMILY SSF100950 3 207 4.19E-74 T 11-11-2016 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 263 279 2.2E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 176 195 2.2E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 222 238 2.2E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 152 168 2.2E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 PRINTS PR00133 Glycosyl hydrolase family 3 signature 333 351 2.2E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 Gene3D G3DSA:3.40.50.1700 437 664 5.0E-63 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 451 665 1.7E-33 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 SUPERFAMILY SSF51445 68 450 8.84E-105 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 87 410 3.5E-78 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 SUPERFAMILY SSF52279 451 666 2.75E-46 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS11710 54bb0a5489fcc26f162a43fe536c632b 870 Gene3D G3DSA:3.20.20.300 70 419 1.5E-103 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS02820 2dbb3eed20719833c263aee096aad7f0 425 Pfam PF04932 O-Antigen ligase 189 344 6.6E-16 T 11-11-2016 IPR007016 O-antigen ligase-related ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 Pfam PF00561 alpha/beta hydrolase fold 45 384 1.2E-27 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 398 43.367 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 Gene3D G3DSA:3.40.50.1820 17 297 9.6E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 Gene3D G3DSA:3.40.50.1820 336 397 9.6E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 17 295 1.2E-93 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 PIRSF PIRSF000443 1 399 3.5E-136 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 SUPERFAMILY SSF53474 11 293 9.68E-86 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS10185 17a140f2d3b239d95312cd90581dd542 399 SUPERFAMILY SSF53474 324 397 9.68E-86 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 SUPERFAMILY SSF160246 81 169 7.85E-13 T 11-11-2016 ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 81 174 1.2E-14 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 Gene3D G3DSA:3.40.50.300 330 600 2.7E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 Pfam PF00437 Type II/IV secretion system protein 231 491 1.1E-72 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 Gene3D G3DSA:3.30.450.90 210 324 4.5E-46 T 11-11-2016 ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 SMART SM00382 352 473 4.6E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 419 433 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS22115 a8fec0da20583990f41c5614fb786782 604 SUPERFAMILY SSF52540 213 599 1.48E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21550 7ac6bd4ff3b954285d7bb84a2bafac3b 276 Gene3D G3DSA:3.40.50.1010 3 147 1.6E-28 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS21550 7ac6bd4ff3b954285d7bb84a2bafac3b 276 Pfam PF12872 OST-HTH/LOTUS domain 170 233 1.3E-15 T 11-11-2016 IPR025605 OST-HTH/LOTUS domain ATY42_RS21550 7ac6bd4ff3b954285d7bb84a2bafac3b 276 Pfam PF01936 NYN domain 10 144 1.7E-31 T 11-11-2016 IPR021139 NYN domain, limkain-b1-type ATY42_RS07480 c958dcc6fe0b5ba4d0050ebd76ffd2e6 184 Pfam PF03358 NADPH-dependent FMN reductase 5 148 2.1E-39 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATY42_RS07480 c958dcc6fe0b5ba4d0050ebd76ffd2e6 184 SUPERFAMILY SSF52218 5 175 6.2E-48 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS07480 c958dcc6fe0b5ba4d0050ebd76ffd2e6 184 Gene3D G3DSA:3.40.50.360 1 182 1.7E-51 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 Pfam PF00271 Helicase conserved C-terminal domain 506 591 2.2E-7 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 SMART SM00490 496 592 4.8E-11 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 SMART SM00487 195 391 3.3E-21 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 TIGRFAM TIGR00595 priA: primosomal protein N' 220 737 2.2E-172 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 SUPERFAMILY SSF52540 196 375 1.41E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 SUPERFAMILY SSF52540 499 612 3.33E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 SUPERFAMILY SSF52540 406 433 3.33E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 Pfam PF00270 DEAD/DEAH box helicase 213 362 1.1E-12 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 Gene3D G3DSA:3.40.50.300 493 636 9.6E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 Gene3D G3DSA:3.40.50.300 408 427 9.6E-27 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 Gene3D G3DSA:3.40.50.300 198 380 1.0E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02710 ee68b88cf762bc4d1406771f5a8c214a 740 Hamap MF_00983 Probable primosomal protein N' [priA]. 10 739 23.533 T 11-11-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ATY42_RS09770 77eb27e3a7883382a43c3450d4f7ed4b 149 Pfam PF13936 Helix-turn-helix domain 6 47 7.8E-14 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS03005 77eb27e3a7883382a43c3450d4f7ed4b 149 Pfam PF13936 Helix-turn-helix domain 6 47 7.8E-14 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 SUPERFAMILY SSF100950 143 260 5.02E-5 T 11-11-2016 ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 SUPERFAMILY SSF100950 23 116 5.02E-5 T 11-11-2016 ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 SUPERFAMILY SSF100950 224 268 1.32E-39 T 11-11-2016 ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 SUPERFAMILY SSF100950 301 539 1.32E-39 T 11-11-2016 ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 366 530 4.9E-36 T 11-11-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 Gene3D G3DSA:3.30.750.70 224 269 1.1E-31 T 11-11-2016 ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 Gene3D G3DSA:3.30.750.70 304 378 1.1E-31 T 11-11-2016 ATY42_RS05760 75e7ae6ffc3b79490e138d98c5326ba3 652 Gene3D G3DSA:3.40.810.20 404 510 1.9E-6 T 11-11-2016 ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 12 351 45.914 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 Pfam PF02769 AIR synthase related protein, C-terminal domain 181 346 4.2E-37 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 Gene3D G3DSA:3.30.1330.10 27 174 7.0E-63 T 11-11-2016 IPR016188 PurM-like, N-terminal domain ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 12 341 7.7E-136 T 11-11-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 SUPERFAMILY SSF55326 12 174 8.82E-53 T 11-11-2016 ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 Pfam PF00586 AIR synthase related protein, N-terminal domain 66 168 1.2E-13 T 11-11-2016 IPR016188 PurM-like, N-terminal domain ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 SUPERFAMILY SSF56042 176 347 3.74E-57 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS06370 0c915aee01a5d4d9a6d95b34424dd9a7 352 Gene3D G3DSA:3.90.650.10 176 348 8.9E-64 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 SUPERFAMILY SSF52151 6 124 3.92E-77 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 SUPERFAMILY SSF52151 192 312 3.92E-77 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 Gene3D G3DSA:3.30.70.250 127 198 6.9E-26 T 11-11-2016 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 PIRSF PIRSF000446 4 312 2.2E-102 T 11-11-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 9 312 1.4E-43 T 11-11-2016 IPR020801 Polyketide synthase, acyl transferase domain ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 SUPERFAMILY SSF55048 132 199 2.35E-16 T 11-11-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 6 292 1.6E-99 T 11-11-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 Gene3D G3DSA:3.40.366.10 199 302 6.5E-70 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 Gene3D G3DSA:3.40.366.10 4 124 6.5E-70 T 11-11-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 ATY42_RS04245 da3a72da4e71190e0919af3f4fcc5abe 314 Pfam PF00698 Acyl transferase domain 8 259 1.9E-35 T 11-11-2016 IPR014043 Acyl transferase ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 606 5.4E-240 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 627 37.447 T 11-11-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 Pfam PF06480 FtsH Extracellular 8 100 1.4E-10 T 11-11-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 SUPERFAMILY SSF140990 416 615 1.19E-75 T 11-11-2016 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 11-11-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 SUPERFAMILY SSF52540 159 404 1.66E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 Pfam PF01434 Peptidase family M41 395 604 1.8E-81 T 11-11-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 Gene3D G3DSA:1.10.8.60 345 418 1.9E-27 T 11-11-2016 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 Gene3D G3DSA:3.40.50.300 161 344 8.7E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 333 3.1E-46 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS14740 16606ef03712ef009b151d48b6e3bf0d 646 SMART SM00382 197 336 1.6E-26 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 8 565 2.0E-124 T 11-11-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Pfam PF13538 UvrD-like helicase C-terminal domain 647 693 7.7E-15 T 11-11-2016 IPR027785 UvrD-like helicase C-terminal domain ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 716 44.928 T 11-11-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Pfam PF13604 AAA domain 204 377 1.2E-29 T 11-11-2016 ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Gene3D G3DSA:3.40.50.300 635 705 4.9E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Gene3D G3DSA:3.40.50.300 354 367 4.9E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Gene3D G3DSA:3.40.50.300 478 524 4.9E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Gene3D G3DSA:3.40.50.300 418 444 4.9E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 Gene3D G3DSA:3.40.50.300 201 353 5.1E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 SUPERFAMILY SSF52540 411 442 1.15E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 SUPERFAMILY SSF52540 338 378 1.15E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 SUPERFAMILY SSF52540 621 717 1.15E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 SUPERFAMILY SSF52540 494 568 1.15E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 SUPERFAMILY SSF52540 8 152 4.94E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22470 d08d089b3fad6821864e9da63017f0ad 750 SUPERFAMILY SSF52540 197 424 4.94E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 228 3.4E-80 T 11-11-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 117 197 1.2E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 SUPERFAMILY SSF56784 1 230 5.51E-58 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 1.1E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 192 205 1.1E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 115 128 1.1E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 165 185 1.1E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 3 230 39.7 T 11-11-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|Reactome: R-HSA-1237112 ATY42_RS10390 300ee005d70ef06d911f8578bb6e545b 232 Gene3D G3DSA:3.40.50.1000 4 230 3.9E-20 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS19395 b0ba041d9c1c81b99731239d528d4ce4 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 9.8E-51 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19395 b0ba041d9c1c81b99731239d528d4ce4 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 28.32 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19395 b0ba041d9c1c81b99731239d528d4ce4 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 4.4E-43 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19395 b0ba041d9c1c81b99731239d528d4ce4 154 SUPERFAMILY SSF52121 4 153 1.7E-53 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19395 b0ba041d9c1c81b99731239d528d4ce4 154 Gene3D G3DSA:3.40.50.960 3 151 9.6E-58 T 11-11-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 Gene3D G3DSA:1.10.10.10 134 229 2.5E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 Pfam PF00072 Response regulator receiver domain 11 121 1.1E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 SUPERFAMILY SSF46894 130 229 7.65E-22 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 SMART SM00448 9 121 3.1E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 SUPERFAMILY SSF52172 9 134 1.99E-40 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 229 1.6E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 Gene3D G3DSA:3.40.50.2300 5 131 2.4E-40 T 11-11-2016 ATY42_RS18945 d7384db0ec93ad4d6927b09ff72b30e6 237 SMART SM00862 155 229 6.3E-16 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS00940 641dcfda16e24467138d0cfa17965e64 203 Pfam PF09851 Short C-terminal domain 175 200 2.0E-8 T 11-11-2016 IPR018649 SHOCT domain ATY42_RS00940 641dcfda16e24467138d0cfa17965e64 203 Pfam PF14470 Bacterial PH domain 28 121 2.0E-18 T 11-11-2016 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 SUPERFAMILY SSF53738 318 493 3.81E-38 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 472 569 2.3E-28 T 11-11-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 SUPERFAMILY SSF53738 471 571 2.83E-32 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Gene3D G3DSA:3.40.120.10 488 565 2.1E-32 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 SUPERFAMILY SSF55957 684 776 5.93E-19 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 325 453 2.7E-35 T 11-11-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 549 564 5.0E-23 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 520 533 5.0E-23 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 486 505 5.0E-23 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 413 427 5.0E-23 T 11-11-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 689 770 3.0E-12 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Gene3D G3DSA:3.40.120.10 567 683 3.9E-45 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Gene3D G3DSA:3.40.120.10 324 478 8.2E-34 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 574 683 3.3E-24 T 11-11-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 Gene3D G3DSA:3.30.310.50 686 776 2.8E-25 T 11-11-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS02350 8069e11837f22a70a210208d82520614 782 SUPERFAMILY SSF53738 574 680 5.1E-34 T 11-11-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 Pfam PF00664 ABC transporter transmembrane region 41 304 6.7E-15 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 Pfam PF00005 ABC transporter 379 531 1.9E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 SMART SM00382 386 577 6.2E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 ProSitePatterns PS00211 ABC transporters family signature. 503 517 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 Gene3D G3DSA:1.20.1560.10 28 341 1.8E-40 T 11-11-2016 ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 SUPERFAMILY SSF90123 21 347 1.03E-50 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 Gene3D G3DSA:3.40.50.300 361 596 3.8E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07695 a513b48f72f4d8784934e654582ae1f8 610 SUPERFAMILY SSF52540 350 601 5.71E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 Pfam PF00338 Ribosomal protein S10p/S20e 8 102 2.6E-34 T 11-11-2016 IPR027486 Ribosomal protein S10 domain ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 Gene3D G3DSA:3.30.70.600 5 103 2.2E-42 T 11-11-2016 IPR027486 Ribosomal protein S10 domain ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 ProSitePatterns PS00361 Ribosomal protein S10 signature. 30 45 - T 11-11-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 SMART SM01403 8 102 1.4E-54 T 11-11-2016 IPR027486 Ribosomal protein S10 domain ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 SUPERFAMILY SSF54999 6 103 1.83E-36 T 11-11-2016 IPR027486 Ribosomal protein S10 domain ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 PRINTS PR00971 Ribosomal protein S10 family signature 41 56 3.8E-18 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 PRINTS PR00971 Ribosomal protein S10 family signature 6 19 3.8E-18 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 PRINTS PR00971 Ribosomal protein S10 family signature 62 76 3.8E-18 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 102 1.5E-44 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18050 a36e4098930008b67dfd8fbb2dae3cbe 104 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 4 103 26.611 T 11-11-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SUPERFAMILY SSF55874 234 417 4.45E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SMART SM00387 276 419 7.9E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Pfam PF01627 Hpt domain 9 105 8.0E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SMART SM00073 5 102 1.1E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Gene3D G3DSA:2.40.50.180 443 503 5.3E-9 T 11-11-2016 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SMART SM00260 411 548 5.3E-30 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Gene3D G3DSA:1.10.287.560 171 232 1.2E-17 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SUPERFAMILY SSF50341 418 547 3.92E-31 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Gene3D G3DSA:3.30.565.10 234 418 6.5E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 172 230 1.1E-11 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Gene3D G3DSA:1.20.120.160 6 143 4.0E-37 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Gene3D G3DSA:2.30.30.40 419 440 2.2E-21 T 11-11-2016 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Gene3D G3DSA:2.30.30.40 504 547 2.2E-21 T 11-11-2016 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SUPERFAMILY SSF47384 172 232 4.32E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Pfam PF01584 CheW-like domain 425 547 2.9E-26 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SMART SM01231 171 231 2.8E-16 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 397 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 335 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 416 4.9E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 418 1.4E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13010 e129ca380514af0b10086726e37775c4 552 SUPERFAMILY SSF47226 7 125 2.62E-28 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 17 318 35.339 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 79 90 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Pfam PF01820 D-ala D-ala ligase N-terminus 18 102 1.1E-19 T 11-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Gene3D G3DSA:3.30.470.20 193 317 2.7E-46 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Gene3D G3DSA:3.30.470.20 101 119 2.7E-46 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 259 288 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 PIRSF PIRSF039102 54 318 5.7E-83 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 18 317 1.3E-104 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 SUPERFAMILY SSF52440 18 112 5.47E-26 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Pfam PF07478 D-ala D-ala ligase C-terminus 120 314 2.2E-55 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 SUPERFAMILY SSF56059 112 315 3.2E-53 T 11-11-2016 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Gene3D G3DSA:3.30.1490.20 123 192 9.8E-21 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS19245 5a742e114d7c1e68962724d06c908059 318 Gene3D G3DSA:3.40.50.20 18 100 3.1E-25 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 SUPERFAMILY SSF51905 1 189 5.02E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 SUPERFAMILY SSF51905 336 391 5.02E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 Gene3D G3DSA:3.50.50.60 338 391 1.3E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 Gene3D G3DSA:3.50.50.60 2 187 1.3E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.5E-6 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.5E-6 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 346 368 1.5E-6 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.5E-8 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 361 368 1.5E-8 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 1.5E-8 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 Pfam PF03486 HI0933-like protein 5 391 3.8E-143 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 390 1.2E-123 T 11-11-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 Gene3D G3DSA:1.10.8.260 269 320 3.5E-13 T 11-11-2016 IPR023166 HI0933 insert-like domain ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 Gene3D G3DSA:2.40.30.10 189 268 9.0E-29 T 11-11-2016 ATY42_RS13485 a6fd92aedad361a513171d484b33682f 393 SUPERFAMILY SSF160996 191 339 3.27E-36 T 11-11-2016 ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 Gene3D G3DSA:3.40.50.200 52 379 8.9E-62 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 PRINTS PR00723 Subtilisin serine protease family (S8) signature 320 336 4.1E-14 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 PRINTS PR00723 Subtilisin serine protease family (S8) signature 124 137 4.1E-14 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 PRINTS PR00723 Subtilisin serine protease family (S8) signature 83 102 4.1E-14 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 SUPERFAMILY SSF103515 641 942 4.45E-36 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 321 331 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 Gene3D G3DSA:2.160.20.20 398 625 7.3E-7 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 410 440 4.2E-11 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 SMART SM00869 676 932 2.0E-25 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 SUPERFAMILY SSF52743 66 381 7.07E-58 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 88 99 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 Pfam PF03797 Autotransporter beta-domain 678 923 5.7E-37 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 Pfam PF00082 Subtilase family 83 371 8.4E-36 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 Gene3D G3DSA:2.40.128.130 634 941 1.2E-36 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS09135 6d7d97070b631d8a440af24274628902 942 Pfam PF12951 Passenger-associated-transport-repeat 411 440 2.9E-8 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS17760 e18466841be789a5be42b19c7436faa9 393 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 30 178 3.6E-6 T 11-11-2016 IPR019587 Polyketide cyclase/dehydrase ATY42_RS17760 e18466841be789a5be42b19c7436faa9 393 SUPERFAMILY SSF55961 26 181 1.24E-8 T 11-11-2016 ATY42_RS18665 80e3aa376b5df3dd47972ce4000825ad 154 Pfam PF00072 Response regulator receiver domain 11 117 1.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18665 80e3aa376b5df3dd47972ce4000825ad 154 Gene3D G3DSA:3.40.50.2300 10 129 1.2E-28 T 11-11-2016 ATY42_RS18665 80e3aa376b5df3dd47972ce4000825ad 154 SMART SM00448 9 124 1.3E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18665 80e3aa376b5df3dd47972ce4000825ad 154 SUPERFAMILY SSF52172 9 142 3.98E-31 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 SUPERFAMILY SSF75516 5 183 7.45E-31 T 11-11-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 Gene3D G3DSA:1.10.10.10 187 253 8.2E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 SUPERFAMILY SSF46894 176 252 4.08E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 222 234 4.5E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 206 4.5E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 206 222 4.5E-9 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 Pfam PF03472 Autoinducer binding domain 26 175 7.7E-24 T 11-11-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 Pfam PF00196 Bacterial regulatory proteins, luxR family 191 244 5.1E-18 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 ProSitePatterns PS00622 LuxR-type HTH domain signature. 206 233 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 Gene3D G3DSA:3.30.450.80 2 186 8.4E-37 T 11-11-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain ATY42_RS06220 e80d18613c4cd28ecf2b049a24c98bcc 254 SMART SM00421 189 246 5.0E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS08440 65009b356515983bfb2b6aa25e5eab60 239 SUPERFAMILY SSF53067 106 214 3.24E-20 T 11-11-2016 ATY42_RS08440 65009b356515983bfb2b6aa25e5eab60 239 SUPERFAMILY SSF53067 1 101 5.61E-29 T 11-11-2016 ATY42_RS08440 65009b356515983bfb2b6aa25e5eab60 239 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 3.1E-57 T 11-11-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 ATY42_RS08440 65009b356515983bfb2b6aa25e5eab60 239 Pfam PF00814 Glycoprotease family 28 220 3.3E-32 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS08440 65009b356515983bfb2b6aa25e5eab60 239 Gene3D G3DSA:3.30.420.40 1 131 1.3E-40 T 11-11-2016 ATY42_RS02385 a9e93cf777027cd89a9753ef1d1d3e30 265 Gene3D G3DSA:3.40.50.300 3 256 1.8E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02385 a9e93cf777027cd89a9753ef1d1d3e30 265 Pfam PF13614 AAA domain 3 177 2.6E-63 T 11-11-2016 IPR025669 AAA domain ATY42_RS02385 a9e93cf777027cd89a9753ef1d1d3e30 265 SUPERFAMILY SSF52540 1 252 4.34E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 Gene3D G3DSA:3.90.1580.10 826 926 3.2E-10 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 228 240 - T 11-11-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 Pfam PF00069 Protein kinase domain 104 366 5.5E-35 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 Gene3D G3DSA:1.10.510.10 174 366 1.2E-34 T 11-11-2016 ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 107 136 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 SUPERFAMILY SSF56436 825 966 2.59E-18 T 11-11-2016 IPR016187 C-type lectin fold ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 SUPERFAMILY SSF56112 100 365 1.18E-53 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 Gene3D G3DSA:3.30.200.20 94 173 1.4E-18 T 11-11-2016 ATY42_RS15230 4888c78c1b3e358c861a8b6991fda32d 967 Pfam PF03781 Sulfatase-modifying factor enzyme 1 825 904 3.3E-11 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 6 514 5.3E-167 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 Pfam PF05746 DALR anticodon binding domain 637 730 1.3E-7 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 Gene3D G3DSA:1.10.730.10 637 732 4.0E-6 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 585 6.3E-192 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 SUPERFAMILY SSF109604 351 489 2.09E-15 T 11-11-2016 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 743 24.368 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 1.6E-29 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 1.6E-29 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 248 263 1.6E-29 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 1.6E-29 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 1.6E-29 T 11-11-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22105 2743a5cbb889857d63c28e3886a9c24d 745 SMART SM00836 640 743 9.9E-4 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ATY42_RS21115 77fda2ca98e4e3213c93024762f28b77 271 Pfam PF12762 ISXO2-like transposase domain 148 270 9.6E-22 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21115 77fda2ca98e4e3213c93024762f28b77 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 8.1E-8 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS21115 77fda2ca98e4e3213c93024762f28b77 271 SMART SM01126 148 270 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04860 525a89df8c128ab2bf68b7bcbddd70bf 243 Gene3D G3DSA:3.20.20.190 34 222 2.3E-38 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS04860 525a89df8c128ab2bf68b7bcbddd70bf 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 162 4.1E-20 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATY42_RS04860 525a89df8c128ab2bf68b7bcbddd70bf 243 SUPERFAMILY SSF51695 42 220 3.92E-37 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS09045 d3e998451de54fa3b8d51562ea21299b 334 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 3 292 5.9E-78 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS09045 d3e998451de54fa3b8d51562ea21299b 334 Gene3D G3DSA:3.20.20.300 1 297 3.3E-87 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS09045 d3e998451de54fa3b8d51562ea21299b 334 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 1 332 44.73 T 11-11-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 ATY42_RS09045 d3e998451de54fa3b8d51562ea21299b 334 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 233 250 - T 11-11-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 ATY42_RS09045 d3e998451de54fa3b8d51562ea21299b 334 SUPERFAMILY SSF51445 1 297 1.9E-78 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS04200 965ba6b5c927be554c6468e101d88cea 614 Pfam PF09709 CRISPR-associated protein (Cas_Csd1) 6 596 1.2E-172 T 11-11-2016 IPR010144 CRISPR-associated protein, Csd1-type ATY42_RS04200 965ba6b5c927be554c6468e101d88cea 614 TIGRFAM TIGR01863 cas_Csd1: CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG 3 599 2.3E-171 T 11-11-2016 IPR010144 CRISPR-associated protein, Csd1-type ATY42_RS23085 6550accf8cf55a3d81cc45b645f8126e 403 SUPERFAMILY SSF53098 20 367 4.25E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS23085 6550accf8cf55a3d81cc45b645f8126e 403 Pfam PF13546 DDE superfamily endonuclease 1 255 8.4E-86 T 11-11-2016 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 SUPERFAMILY SSF48557 6 444 2.04E-113 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 Gene3D G3DSA:1.20.200.10 105 372 9.5E-84 T 11-11-2016 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 7 350 2.3E-141 T 11-11-2016 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 SMART SM00998 365 444 3.8E-21 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 1.8E-7 T 11-11-2016 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 1.8E-7 T 11-11-2016 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.8E-7 T 11-11-2016 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 Pfam PF00206 Lyase 22 302 1.1E-54 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 Gene3D G3DSA:1.10.275.10 11 104 7.8E-38 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 Gene3D G3DSA:1.10.40.30 373 444 5.6E-23 T 11-11-2016 ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 1.4E-21 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.4E-21 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 1.4E-21 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 1.4E-21 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS02280 b1065296c98a618c27903af7016608fc 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 367 443 2.3E-13 T 11-11-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Pfam PF05593 RHS Repeat 594 630 2.7E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Pfam PF05593 RHS Repeat 636 672 5.3E-9 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Pfam PF05593 RHS Repeat 938 974 1.4E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Pfam PF05593 RHS Repeat 742 777 2.4E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Pfam PF05593 RHS Repeat 510 547 5.1E-11 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Pfam PF05593 RHS Repeat 552 589 6.7E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1313 1387 8.7E-17 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 938 978 6.8E-5 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 594 634 9.6E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 678 718 2.9E-4 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 636 677 9.3E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 720 761 4.4E-8 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 553 590 3.2E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 510 549 1.0E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 762 798 5.8E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 Gene3D G3DSA:2.130.10.10 473 566 3.9E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS08055 0baadeefce4079180b96fb2a817715ca 1387 SUPERFAMILY SSF101908 433 569 2.62E-6 T 11-11-2016 ATY42_RS22515 8eb80e0eae94d48ba467a0721182e540 83 Pfam PF13358 DDE superfamily endonuclease 8 46 1.8E-7 T 11-11-2016 ATY42_RS07330 79ab7d8b236afff33765f018301c067a 352 Pfam PF13592 Winged helix-turn helix 104 162 1.9E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS07330 79ab7d8b236afff33765f018301c067a 352 Pfam PF13358 DDE superfamily endonuclease 178 317 3.6E-31 T 11-11-2016 ATY42_RS07330 79ab7d8b236afff33765f018301c067a 352 SUPERFAMILY SSF46689 20 138 1.36E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07330 79ab7d8b236afff33765f018301c067a 352 Pfam PF13551 Winged helix-turn helix 27 86 9.3E-15 T 11-11-2016 ATY42_RS03020 7fac0bad246b0b26aa4141596a235586 478 Pfam PF12040 Domain of unknown function (DUF3526) 272 438 9.6E-39 T 11-11-2016 IPR021913 Protein of unknown function DUF3526 ATY42_RS03020 7fac0bad246b0b26aa4141596a235586 478 Pfam PF12679 ABC-2 family transporter protein 7 264 1.0E-21 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 ATY42_RS14775 67b0e2fc4dfe56abdececf489dc8c306 259 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 253 40.871 T 11-11-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ATY42_RS14775 67b0e2fc4dfe56abdececf489dc8c306 259 Pfam PF01975 Survival protein SurE 3 185 7.2E-57 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ATY42_RS14775 67b0e2fc4dfe56abdececf489dc8c306 259 Gene3D G3DSA:3.40.1210.10 1 248 7.2E-87 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ATY42_RS14775 67b0e2fc4dfe56abdececf489dc8c306 259 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 236 6.4E-69 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ATY42_RS14775 67b0e2fc4dfe56abdececf489dc8c306 259 SUPERFAMILY SSF64167 1 249 6.41E-84 T 11-11-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 ATY42_RS13410 8179059518ca11e794874062678f960c 277 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 82 95 - T 11-11-2016 IPR020583 Inositol monophosphatase, metal-binding site ATY42_RS13410 8179059518ca11e794874062678f960c 277 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 11-11-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 3.9E-55 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 61 77 3.9E-55 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 39 59 3.9E-55 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 3.9E-55 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 131 154 3.9E-55 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 3.9E-55 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 Gene3D G3DSA:3.30.540.10 5 151 3.0E-47 T 11-11-2016 ATY42_RS13410 8179059518ca11e794874062678f960c 277 Pfam PF00459 Inositol monophosphatase family 4 253 7.2E-64 T 11-11-2016 IPR000760 Inositol monophosphatase GO:0046854 ATY42_RS13410 8179059518ca11e794874062678f960c 277 Gene3D G3DSA:3.40.190.80 152 265 4.1E-35 T 11-11-2016 ATY42_RS13410 8179059518ca11e794874062678f960c 277 SUPERFAMILY SSF56655 5 264 4.71E-78 T 11-11-2016 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 105 124 2.1E-20 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 18 40 2.1E-20 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 199 211 2.1E-20 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ATY42_RS13410 8179059518ca11e794874062678f960c 277 PRINTS PR01959 SuhB family inositol monophosphatase signature 157 183 2.1E-20 T 11-11-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 ATY42_RS02530 a072fd41aea497c16cd8021194a2b57c 126 Pfam PF04505 Interferon-induced transmembrane protein 23 98 2.0E-11 T 11-11-2016 IPR007593 CD225/Dispanin family GO:0009607|GO:0016021 ATY42_RS09865 fdc2659c6b2aa423a86270bc7d0c8da1 302 SUPERFAMILY SSF53613 25 278 2.18E-55 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS09865 fdc2659c6b2aa423a86270bc7d0c8da1 302 Gene3D G3DSA:3.40.1190.20 24 284 9.9E-63 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS09865 fdc2659c6b2aa423a86270bc7d0c8da1 302 Pfam PF08543 Phosphomethylpyrimidine kinase 114 276 1.9E-18 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 ATY42_RS09865 fdc2659c6b2aa423a86270bc7d0c8da1 302 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 24 299 3.7E-51 T 11-11-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Pfam PF13245 Part of AAA domain 313 400 8.8E-8 T 11-11-2016 ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Pfam PF13087 AAA domain 864 1020 3.9E-12 T 11-11-2016 ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Gene3D G3DSA:3.40.50.300 738 861 1.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Gene3D G3DSA:3.40.50.300 380 423 1.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Gene3D G3DSA:3.40.50.300 472 473 1.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Gene3D G3DSA:3.40.50.300 289 344 1.1E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 SUPERFAMILY SSF52540 383 408 1.37E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 SUPERFAMILY SSF52540 828 1023 1.37E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 SUPERFAMILY SSF52540 717 775 1.37E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 SUPERFAMILY SSF52540 487 502 1.37E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 SUPERFAMILY SSF52540 304 343 1.37E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Gene3D G3DSA:3.40.50.300 525 558 7.0E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Gene3D G3DSA:3.40.50.300 955 1021 7.0E-8 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13855 d4ecd8a884d2f138018cf64731998027 1045 Pfam PF13086 AAA domain 719 778 1.1E-8 T 11-11-2016 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 SUPERFAMILY SSF58104 415 696 2.75E-72 T 11-11-2016 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 4.2E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 4.2E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 4.2E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 4.2E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 Pfam PF00672 HAMP domain 195 262 3.0E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 502 694 1.2E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 SMART SM00283 448 695 2.2E-93 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 8 181 8.5E-19 T 11-11-2016 IPR024478 4HB MCP domain ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 Gene3D G3DSA:1.10.287.950 463 667 2.6E-62 T 11-11-2016 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 SUPERFAMILY SSF158472 214 265 1.7E-9 T 11-11-2016 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 SMART SM00304 395 447 13.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14225 6b2d7b730cb494842f273d26200c8c16 753 SMART SM00304 214 266 1.2E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 SMART SM00448 4 118 2.4E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 SMART SM00421 146 203 9.0E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 202 2.3E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 SUPERFAMILY SSF46894 129 204 6.46E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 Gene3D G3DSA:1.10.10.10 124 203 1.8E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 Pfam PF00072 Response regulator receiver domain 6 117 2.0E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 Gene3D G3DSA:3.40.50.2300 3 123 1.9E-29 T 11-11-2016 ATY42_RS05360 596bd84127faa0e68ae4ddf40ecd9bad 212 SUPERFAMILY SSF52172 2 150 2.42E-26 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 SUPERFAMILY SSF55315 61 134 8.24E-12 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 SUPERFAMILY SSF75217 152 298 3.92E-30 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 Pfam PF00588 SpoU rRNA Methylase family 156 293 2.5E-28 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 Gene3D G3DSA:3.30.1330.30 61 134 7.0E-15 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 SMART SM00967 65 140 7.1E-13 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 Gene3D G3DSA:3.40.1280.10 154 295 3.7E-35 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS16960 6b0fb7528cbade7697c6485a66a957b1 303 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 66 134 4.0E-13 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Gene3D G3DSA:1.10.8.60 392 438 1.4E-15 T 11-11-2016 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 243 256 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Gene3D G3DSA:3.40.50.10660 102 180 9.5E-36 T 11-11-2016 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 SMART SM00382 239 382 1.8E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 SUPERFAMILY SSF159800 15 195 4.05E-47 T 11-11-2016 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Pfam PF00158 Sigma-54 interaction domain 220 385 8.2E-61 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Pfam PF02954 Bacterial regulatory protein, Fis family 495 525 2.8E-8 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 SUPERFAMILY SSF46689 428 524 2.46E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 13 526 3.6E-233 T 11-11-2016 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Gene3D G3DSA:1.10.10.60 439 525 7.7E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 493 510 5.4E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 510 530 5.4E-5 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Gene3D G3DSA:3.40.50.2300 4 101 4.3E-43 T 11-11-2016 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Pfam PF06506 Propionate catabolism activator 37 195 2.1E-45 T 11-11-2016 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 SUPERFAMILY SSF52540 220 448 5.45E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 Gene3D G3DSA:3.40.50.300 217 391 4.0E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04295 a6aeab74df2010703e3f7b72b8e15695 532 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 428 437 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 TIGRFAM TIGR01027 proB: glutamate 5-kinase 21 382 3.1E-121 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 SUPERFAMILY SSF53633 20 269 1.7E-58 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 Pfam PF00696 Amino acid kinase family 21 248 6.7E-37 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 PRINTS PR00474 Glutamate 5-kinase family signature 222 242 1.7E-39 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 PRINTS PR00474 Glutamate 5-kinase family signature 57 71 1.7E-39 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 PRINTS PR00474 Glutamate 5-kinase family signature 161 188 1.7E-39 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 PRINTS PR00474 Glutamate 5-kinase family signature 129 150 1.7E-39 T 11-11-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 Hamap MF_00456 Glutamate 5-kinase [proB]. 20 271 34.512 T 11-11-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 ProSitePatterns PS00902 Glutamate 5-kinase signature. 220 237 - T 11-11-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 SUPERFAMILY SSF88697 290 383 2.21E-21 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 PIRSF PIRSF000729 17 384 1.1E-132 T 11-11-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 SMART SM00359 290 376 2.6E-15 T 11-11-2016 IPR002478 PUA domain GO:0003723 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 Pfam PF01472 PUA domain 290 367 2.6E-21 T 11-11-2016 IPR002478 PUA domain GO:0003723 ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 Gene3D G3DSA:3.40.1160.10 15 272 5.3E-53 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS13190 fcae618af5354525da37858ee82a9c2d 384 Gene3D G3DSA:2.30.130.10 289 382 7.8E-25 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.372 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.5E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.5E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.5E-39 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 1.0E-21 T 11-11-2016 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 Pfam PF00453 Ribosomal protein L20 3 109 3.3E-47 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.9E-48 T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-11-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 SUPERFAMILY SSF74731 3 117 1.99E-48 T 11-11-2016 ATY42_RS16000 bf8de4dc44135e4b8e9da2423a409f00 119 Gene3D G3DSA:1.10.1900.20 55 117 2.2E-30 T 11-11-2016 ATY42_RS21765 371a575a1ccf845a356606436bf4e579 197 Gene3D G3DSA:3.40.50.360 7 187 2.7E-30 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS21765 371a575a1ccf845a356606436bf4e579 197 SUPERFAMILY SSF52218 6 190 7.26E-32 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS21765 371a575a1ccf845a356606436bf4e579 197 TIGRFAM TIGR03566 FMN_reduc_MsuE: FMN reductase 10 181 3.8E-75 T 11-11-2016 IPR019912 FMN reductase, MsuE-like KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 ATY42_RS21765 371a575a1ccf845a356606436bf4e579 197 Pfam PF03358 NADPH-dependent FMN reductase 10 153 1.1E-27 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 566 7.3E-151 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 Gene3D G3DSA:3.20.20.60 257 568 4.3E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 PIRSF PIRSF000732 1 575 1.2E-196 T 11-11-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 Gene3D G3DSA:1.10.274.10 25 134 7.1E-27 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 226 5.5E-20 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 SUPERFAMILY SSF51621 249 544 1.26E-95 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 2.7E-26 T 11-11-2016 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 2.7E-26 T 11-11-2016 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 2.7E-26 T 11-11-2016 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 2.7E-26 T 11-11-2016 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 543 2.2E-95 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 SUPERFAMILY SSF47831 27 145 4.97E-26 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 SUPERFAMILY SSF52009 116 235 2.88E-28 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 129 5.1E-24 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ATY42_RS06265 46d99004e93ee07d51042d13561b44a9 576 Gene3D G3DSA:3.50.30.10 135 256 7.6E-36 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS02785 b04637004d23353143907deaa2e567c7 157 Hamap MF_00598 Protein Smg [smg]. 5 157 30.815 T 11-11-2016 IPR007456 Smg ATY42_RS02785 b04637004d23353143907deaa2e567c7 157 Pfam PF04361 Protein of unknown function (DUF494) 5 157 7.6E-56 T 11-11-2016 IPR007456 Smg ATY42_RS11030 1f59e3b715754dbad221e223353b47ae 363 Gene3D G3DSA:3.40.640.10 49 259 2.6E-64 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS11030 1f59e3b715754dbad221e223353b47ae 363 SUPERFAMILY SSF53383 27 357 1.25E-72 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS11030 1f59e3b715754dbad221e223353b47ae 363 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 9 359 53.502 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATY42_RS11030 1f59e3b715754dbad221e223353b47ae 363 Gene3D G3DSA:3.90.1150.10 260 357 4.3E-24 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS11030 1f59e3b715754dbad221e223353b47ae 363 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 11 357 4.5E-108 T 11-11-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ATY42_RS11030 1f59e3b715754dbad221e223353b47ae 363 Pfam PF00155 Aminotransferase class I and II 50 355 9.6E-52 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS14820 c847730cbb91e97d5518846168121932 276 Pfam PF00793 DAHP synthetase I family 8 266 8.7E-67 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ATY42_RS14820 c847730cbb91e97d5518846168121932 276 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 270 53.217 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ATY42_RS14820 c847730cbb91e97d5518846168121932 276 Gene3D G3DSA:3.20.20.70 12 269 3.9E-115 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS14820 c847730cbb91e97d5518846168121932 276 SUPERFAMILY SSF51569 2 270 2.56E-106 T 11-11-2016 ATY42_RS14820 c847730cbb91e97d5518846168121932 276 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 4.2E-129 T 11-11-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ATY42_RS05175 0c0e3b985a6563fedeba69f5b4172e6f 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 49 179 4.2E-63 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ATY42_RS05175 0c0e3b985a6563fedeba69f5b4172e6f 317 Gene3D G3DSA:3.40.50.300 35 195 4.9E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05175 0c0e3b985a6563fedeba69f5b4172e6f 317 PIRSF PIRSF002849 1 317 1.3E-120 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted ATY42_RS05175 0c0e3b985a6563fedeba69f5b4172e6f 317 SUPERFAMILY SSF52540 20 292 8.35E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05175 0c0e3b985a6563fedeba69f5b4172e6f 317 SMART SM00382 46 187 0.0021 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS05175 0c0e3b985a6563fedeba69f5b4172e6f 317 Gene3D G3DSA:1.10.8.300 211 301 1.6E-26 T 11-11-2016 ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 Gene3D G3DSA:3.10.180.10 175 371 1.3E-67 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 21 162 8.2E-59 T 11-11-2016 ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 179 289 9.0E-16 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 29 371 2.4E-114 T 11-11-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 SUPERFAMILY SSF54593 16 358 6.43E-73 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 Gene3D G3DSA:3.10.180.10 20 166 1.5E-34 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS20480 faa0740df6a88f2ff9c94631b7dbfa7c 371 PIRSF PIRSF009283 12 371 5.7E-128 T 11-11-2016 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 ATY42_RS03310 eb3e21f11d6c5bfb63c69f975466bca1 154 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 16 136 3.9E-45 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS03310 eb3e21f11d6c5bfb63c69f975466bca1 154 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 10 136 35.364 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS03310 eb3e21f11d6c5bfb63c69f975466bca1 154 SUPERFAMILY SSF51316 15 138 1.43E-52 T 11-11-2016 IPR011057 Mss4-like ATY42_RS03310 eb3e21f11d6c5bfb63c69f975466bca1 154 Gene3D G3DSA:2.170.150.20 11 138 7.3E-53 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS03310 eb3e21f11d6c5bfb63c69f975466bca1 154 Pfam PF01641 SelR domain 20 134 7.7E-47 T 11-11-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.719 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 2.3E-36 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 SUPERFAMILY SSF47336 2 77 1.57E-23 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-11-2016 IPR006162 Phosphopantetheine attachment site ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 Gene3D G3DSA:1.10.1200.10 3 77 3.6E-36 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 8.0E-4 T 11-11-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS04255 18e2c5c2a99022cea84dfdcbbd572128 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 3.4E-16 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS23265 f7dc2dd9c6fd30695fe4abcb9c1cdbb0 366 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 354 1.6E-47 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATY42_RS23265 f7dc2dd9c6fd30695fe4abcb9c1cdbb0 366 SUPERFAMILY SSF51695 31 360 3.4E-71 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS23265 f7dc2dd9c6fd30695fe4abcb9c1cdbb0 366 Gene3D G3DSA:3.20.20.190 31 360 1.0E-83 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS00045 3e6ae3fe4b0eaae262b43d47eeae3103 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 118 236 7.6E-37 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ATY42_RS07350 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07350 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS15505 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15505 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS19615 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS19615 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21045 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21045 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS15350 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15350 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS14075 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS14075 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS22705 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22705 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS15445 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15445 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17640 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS17640 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10155 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10155 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS20470 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20470 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00670 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00670 ffdb897f3132d340c8f947fabcad92a9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 Gene3D G3DSA:1.20.1050.60 381 472 1.6E-27 T 11-11-2016 ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 SUPERFAMILY SSF48208 296 759 4.25E-27 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 Pfam PF07971 Glycosyl hydrolase family 92 277 761 1.0E-165 T 11-11-2016 IPR012939 Glycosyl hydrolase family 92 ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 Gene3D G3DSA:3.30.2080.10 628 772 1.8E-64 T 11-11-2016 ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 Gene3D G3DSA:1.20.1610.10 473 627 6.3E-60 T 11-11-2016 ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 43 765 7.9E-203 T 11-11-2016 IPR005887 Alpha-1,2-mannosidase, putative ATY42_RS08585 3f8c8201f8cdd1029eead2ca74b48308 780 Gene3D G3DSA:2.70.98.10 44 356 6.8E-104 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 ATY42_RS13005 9a03978e390e8c7a9e25debd859be8d9 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 48 113 4.1E-11 T 11-11-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 ATY42_RS13005 9a03978e390e8c7a9e25debd859be8d9 208 Pfam PF04344 Chemotaxis phosphatase, CheZ 125 207 1.1E-13 T 11-11-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 ATY42_RS13005 9a03978e390e8c7a9e25debd859be8d9 208 Gene3D G3DSA:1.10.287.500 124 161 4.5E-9 T 11-11-2016 ATY42_RS13005 9a03978e390e8c7a9e25debd859be8d9 208 Gene3D G3DSA:1.10.287.500 68 117 1.0E-11 T 11-11-2016 ATY42_RS13005 9a03978e390e8c7a9e25debd859be8d9 208 SUPERFAMILY SSF75708 38 207 2.75E-38 T 11-11-2016 ATY42_RS08050 bc6c1bdf0ccd71c689e5cbd641f61fd8 539 SUPERFAMILY SSF48452 261 372 1.9E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08050 bc6c1bdf0ccd71c689e5cbd641f61fd8 539 Gene3D G3DSA:1.25.40.10 245 378 8.8E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS20285 8c272863318790f36c931bbb62512a18 292 Gene3D G3DSA:3.40.50.150 137 205 2.1E-6 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS20285 8c272863318790f36c931bbb62512a18 292 Gene3D G3DSA:3.40.50.150 206 279 3.9E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS20285 8c272863318790f36c931bbb62512a18 292 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 189 252 2.2E-4 T 11-11-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 ATY42_RS20285 8c272863318790f36c931bbb62512a18 292 SUPERFAMILY SSF53335 79 278 2.89E-24 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS06950 e8034d60f036313dec2d13e4571d64d6 230 Pfam PF01168 Alanine racemase, N-terminal domain 12 222 6.1E-28 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS06950 e8034d60f036313dec2d13e4571d64d6 230 PIRSF PIRSF004848 3 227 3.3E-70 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 ATY42_RS06950 e8034d60f036313dec2d13e4571d64d6 230 SUPERFAMILY SSF51419 5 220 2.36E-70 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS06950 e8034d60f036313dec2d13e4571d64d6 230 Gene3D G3DSA:3.20.20.10 4 223 6.1E-82 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS06950 e8034d60f036313dec2d13e4571d64d6 230 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 7 222 1.4E-69 T 11-11-2016 IPR011078 Uncharacterised protein family UPF0001 ATY42_RS11045 6fab013ef63ddeadadc5281e0aa2115c 244 SUPERFAMILY SSF51366 3 243 5.65E-61 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS11045 6fab013ef63ddeadadc5281e0aa2115c 244 Gene3D G3DSA:3.20.20.70 4 243 5.6E-69 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS11045 6fab013ef63ddeadadc5281e0aa2115c 244 Pfam PF00977 Histidine biosynthesis protein 5 236 4.6E-69 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 ATY42_RS11045 6fab013ef63ddeadadc5281e0aa2115c 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 240 9.0E-74 T 11-11-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ATY42_RS11045 6fab013ef63ddeadadc5281e0aa2115c 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 244 31.442 T 11-11-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 261 274 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 Hamap MF_01987 Ribokinase [rbsK]. 2 315 21.552 T 11-11-2016 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 SUPERFAMILY SSF53613 1 312 1.06E-58 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 PRINTS PR00990 Ribokinase signature 102 115 7.9E-19 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 PRINTS PR00990 Ribokinase signature 6 27 7.9E-19 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 PRINTS PR00990 Ribokinase signature 171 186 7.9E-19 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 PRINTS PR00990 Ribokinase signature 224 235 7.9E-19 T 11-11-2016 IPR002139 Ribokinase/fructokinase GO:0004747|GO:0006014 ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 Gene3D G3DSA:3.40.1190.20 2 312 8.7E-68 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS19030 3b03cd39521b13556a3f4545d607009f 316 Pfam PF00294 pfkB family carbohydrate kinase 1 310 3.0E-45 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 37.978 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 Gene3D G3DSA:3.90.870.10 1 211 1.4E-96 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 SUPERFAMILY SSF55821 2 202 1.74E-82 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 Pfam PF00925 GTP cyclohydrolase II 207 362 2.5E-29 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 198 1.2E-81 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 SUPERFAMILY SSF142695 204 364 3.79E-39 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 PIRSF PIRSF001259 1 368 3.4E-114 T 11-11-2016 ATY42_RS19400 84d257fb9dd3a5230519f29984431452 379 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 2.2E-68 T 11-11-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 Gene3D G3DSA:3.30.420.40 14 135 1.1E-38 T 11-11-2016 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 Pfam PF02541 Ppx/GppA phosphatase family 30 313 4.0E-65 T 11-11-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 SUPERFAMILY SSF53067 17 137 7.96E-32 T 11-11-2016 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 SUPERFAMILY SSF53067 142 314 6.64E-43 T 11-11-2016 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 PIRSF PIRSF001267 7 508 1.1E-201 T 11-11-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 SUPERFAMILY SSF109604 319 496 3.51E-47 T 11-11-2016 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 Gene3D G3DSA:3.30.420.150 141 314 6.1E-49 T 11-11-2016 ATY42_RS18480 56c2e2c3dec9acf39926e6f69c14bd02 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 17 312 4.7E-98 T 11-11-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Gene3D G3DSA:3.30.930.10 414 585 1.6E-111 T 11-11-2016 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Gene3D G3DSA:3.30.930.10 134 279 1.6E-111 T 11-11-2016 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 6.1E-13 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Pfam PF02938 GAD domain 311 405 8.8E-26 T 11-11-2016 IPR029351 GAD domain Reactome: R-HSA-379726 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 SUPERFAMILY SSF55681 115 295 2.59E-105 T 11-11-2016 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 SUPERFAMILY SSF55681 424 585 2.59E-105 T 11-11-2016 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 SUPERFAMILY SSF50249 1 112 2.69E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 558 4.6E-106 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.3E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.3E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 6.3E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 6.3E-26 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 2.2E-227 T 11-11-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 Reactome: R-HSA-379726 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Gene3D G3DSA:3.30.1360.30 280 413 5.9E-47 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 34.965 T 11-11-2016 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 SUPERFAMILY SSF55261 294 420 4.14E-41 T 11-11-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ATY42_RS08175 eaeb4b3dad489a4f04751533e59e9153 588 Gene3D G3DSA:2.40.50.140 1 109 4.9E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS02300 247f3dae6220208d5d8b78301a003883 223 Gene3D G3DSA:3.30.450.40 46 222 1.4E-56 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS02300 247f3dae6220208d5d8b78301a003883 223 Gene3D G3DSA:1.10.10.10 1 37 2.8E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02300 247f3dae6220208d5d8b78301a003883 223 SUPERFAMILY SSF55781 48 222 2.35E-49 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS02300 247f3dae6220208d5d8b78301a003883 223 Pfam PF01614 Bacterial transcriptional regulator 95 218 2.2E-36 T 11-11-2016 IPR014757 Transcription regulator IclR, C-terminal ATY42_RS02300 247f3dae6220208d5d8b78301a003883 223 SMART SM00346 1 67 0.0038 T 11-11-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATY42_RS02300 247f3dae6220208d5d8b78301a003883 223 Pfam PF09339 IclR helix-turn-helix domain 2 29 1.1E-5 T 11-11-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 SUPERFAMILY SSF50331 237 359 4.13E-29 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 Pfam PF00005 ABC transporter 21 162 1.3E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 Gene3D G3DSA:3.40.50.300 4 235 4.4E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 Pfam PF08402 TOBE domain 281 351 2.5E-8 T 11-11-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 SUPERFAMILY SSF52540 4 243 9.69E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 Gene3D G3DSA:2.40.50.100 240 285 4.6E-9 T 11-11-2016 ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 Gene3D G3DSA:2.40.50.100 345 359 4.6E-9 T 11-11-2016 ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 SMART SM00382 29 212 5.2E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS11460 e988652a5be4e3afec2162fa649a7a8f 365 Gene3D G3DSA:2.40.50.140 286 343 4.5E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS15905 feddce07954f6cd8d3be6c6d7e818d66 326 Pfam PF01963 TraB family 41 324 2.3E-26 T 11-11-2016 IPR002816 Pheromone shutdown, TraB ATY42_RS00795 fa88d908ccc28a57fdb7951d93c030b9 338 Pfam PF12762 ISXO2-like transposase domain 154 299 5.5E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00795 fa88d908ccc28a57fdb7951d93c030b9 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 2.8E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS00795 fa88d908ccc28a57fdb7951d93c030b9 338 SMART SM01126 154 299 5.6E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 156 3.5E-40 T 11-11-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 SUPERFAMILY SSF48179 184 307 4.08E-23 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 301 1.5E-60 T 11-11-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 Gene3D G3DSA:3.40.50.720 1 181 8.4E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 Gene3D G3DSA:1.10.1040.10 184 305 9.3E-21 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 SUPERFAMILY SSF51735 1 139 3.51E-12 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01710 22c81359f8e2a0d48f1920332b55f8cf 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 297 2.9E-17 T 11-11-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ATY42_RS17170 ba4a0ca81175c9749e562b31ec660a73 268 Pfam PF12762 ISXO2-like transposase domain 148 264 3.5E-19 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS17170 ba4a0ca81175c9749e562b31ec660a73 268 SMART SM01126 148 268 2.8E-25 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS17170 ba4a0ca81175c9749e562b31ec660a73 268 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SUPERFAMILY SSF55785 216 343 1.38E-10 T 11-11-2016 IPR000014 PAS domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SUPERFAMILY SSF55785 373 478 7.85E-12 T 11-11-2016 IPR000014 PAS domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Gene3D G3DSA:3.20.20.450 655 905 1.5E-90 T 11-11-2016 IPR001633 EAL domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00267 470 642 7.2E-55 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Pfam PF00990 Diguanylate cyclase, GGDEF domain 481 638 9.1E-43 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00052 652 898 6.2E-106 T 11-11-2016 IPR001633 EAL domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Pfam PF00563 EAL domain 659 893 3.2E-65 T 11-11-2016 IPR001633 EAL domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SUPERFAMILY SSF141868 659 905 2.62E-83 T 11-11-2016 IPR001633 EAL domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SUPERFAMILY SSF55073 486 644 1.02E-44 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Gene3D G3DSA:3.30.450.20 355 468 5.6E-13 T 11-11-2016 ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Gene3D G3DSA:3.30.450.20 223 343 5.4E-14 T 11-11-2016 ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00091 99 167 1.1E-5 T 11-11-2016 IPR000014 PAS domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00091 229 296 22.0 T 11-11-2016 IPR000014 PAS domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Gene3D G3DSA:3.30.70.270 483 645 3.9E-50 T 11-11-2016 ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SUPERFAMILY SSF55785 105 218 1.1E-20 T 11-11-2016 IPR000014 PAS domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Pfam PF08447 PAS fold 122 211 2.3E-21 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 ATY42_RS12700 b5444a810911dddd68af24550518296e 920 Gene3D G3DSA:3.30.450.20 100 222 2.2E-30 T 11-11-2016 ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00086 429 470 0.0012 T 11-11-2016 IPR001610 PAC motif ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00086 174 217 7.0E-7 T 11-11-2016 IPR001610 PAC motif ATY42_RS12700 b5444a810911dddd68af24550518296e 920 SMART SM00086 304 345 170.0 T 11-11-2016 IPR001610 PAC motif ATY42_RS12700 b5444a810911dddd68af24550518296e 920 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 478 640 2.1E-35 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 371 476 3.4E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS12700 b5444a810911dddd68af24550518296e 920 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 100 224 8.6E-11 T 11-11-2016 IPR000014 PAS domain ATY42_RS20855 25cb6be735f2c7c4e05569e69443dc63 198 PIRSF PIRSF005413 2 193 7.1E-60 T 11-11-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 ATY42_RS20855 25cb6be735f2c7c4e05569e69443dc63 198 Gene3D G3DSA:2.60.370.10 64 180 1.4E-46 T 11-11-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20855 25cb6be735f2c7c4e05569e69443dc63 198 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 31 177 2.3E-45 T 11-11-2016 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 ATY42_RS20855 25cb6be735f2c7c4e05569e69443dc63 198 SUPERFAMILY SSF110111 64 179 9.29E-45 T 11-11-2016 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS19780 7fd987d751f63e9334c4d34e48f26c58 394 SUPERFAMILY SSF53335 21 379 6.31E-86 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19780 7fd987d751f63e9334c4d34e48f26c58 394 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 83 322 8.2E-45 T 11-11-2016 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA Reactome: R-HSA-6799198 ATY42_RS19780 7fd987d751f63e9334c4d34e48f26c58 394 Gene3D G3DSA:3.40.50.150 86 141 1.1E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 803 831 3.5E-4 T 11-11-2016 IPR006530 YD repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 664 694 1.8E-4 T 11-11-2016 IPR006530 YD repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 722 755 2.6E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 869 908 1.3E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 844 867 0.0025 T 11-11-2016 IPR006530 YD repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 Pfam PF05593 RHS Repeat 824 862 8.5E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 Pfam PF05593 RHS Repeat 782 818 8.6E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 Pfam PF05593 RHS Repeat 869 902 1.9E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 Pfam PF05593 RHS Repeat 1081 1118 6.2E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 Pfam PF05593 RHS Repeat 664 695 1.8E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 Pfam PF05593 RHS Repeat 803 839 7.0E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS11310 eb4e9addd1695c4f63a99c92af182751 1366 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1292 1359 4.4E-11 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.5E-56 T 11-11-2016 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 SUPERFAMILY SSF50465 300 395 4.32E-36 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Gene3D G3DSA:2.40.30.10 214 300 3.3E-38 T 11-11-2016 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Gene3D G3DSA:2.40.30.10 302 395 1.3E-46 T 11-11-2016 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 7.8E-14 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Gene3D G3DSA:3.40.50.300 5 213 1.1E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.1E-34 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 SUPERFAMILY SSF52540 6 221 9.96E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.088 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 SUPERFAMILY SSF50447 207 303 1.96E-32 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.2E-19 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATY42_RS18120 3e0bfa6ea6da8257d411890396dcddb9 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.1E-226 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 3.5E-56 T 11-11-2016 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 SUPERFAMILY SSF50465 300 395 4.32E-36 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Gene3D G3DSA:2.40.30.10 214 300 3.3E-38 T 11-11-2016 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Gene3D G3DSA:2.40.30.10 302 395 1.3E-46 T 11-11-2016 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-24 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 149 7.8E-14 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Gene3D G3DSA:3.40.50.300 5 213 1.1E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 4.1E-34 T 11-11-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 SUPERFAMILY SSF52540 6 221 9.96E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.088 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 SUPERFAMILY SSF50447 207 303 1.96E-32 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 1.2E-19 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATY42_RS18055 3e0bfa6ea6da8257d411890396dcddb9 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 396 4.1E-226 T 11-11-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS16755 df78b04e22d339db027f954a476a9de8 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS21320 a50ce58c3b91d487890e9ffaf60c23e3 281 Pfam PF13683 Integrase core domain 200 264 4.2E-26 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS21320 a50ce58c3b91d487890e9ffaf60c23e3 281 SUPERFAMILY SSF53098 108 268 4.55E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21320 a50ce58c3b91d487890e9ffaf60c23e3 281 Gene3D G3DSA:3.30.420.10 109 265 1.5E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21320 a50ce58c3b91d487890e9ffaf60c23e3 281 Pfam PF13276 HTH-like domain 46 98 3.1E-9 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 SUPERFAMILY SSF49785 363 531 2.55E-51 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 Gene3D G3DSA:2.60.120.260 364 531 1.8E-63 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 PIRSF PIRSF011794 3 532 6.5E-242 T 11-11-2016 IPR016590 Rhamnogalacturonase B GO:0005975|GO:0016837 MetaCyc: PWY-6769|MetaCyc: PWY-6771 ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 Pfam PF14683 Polysaccharide lyase family 4, domain III 367 530 5.1E-32 T 11-11-2016 IPR029411 Rhamnogalacturonan lyase, domain III ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 Gene3D G3DSA:2.70.98.10 26 275 7.8E-108 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 Gene3D G3DSA:2.60.40.1120 277 358 2.9E-28 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 Pfam PF14686 Polysaccharide lyase family 4, domain II 286 352 5.0E-15 T 11-11-2016 IPR029413 Rhamnogalacturonan lyase, domain II ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 SUPERFAMILY SSF49452 275 355 1.43E-10 T 11-11-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 Pfam PF09284 Rhamnogalacturonan lyase B, N-terminal 27 268 2.9E-87 T 11-11-2016 IPR015364 Rhamnogalacturonase B, N-terminal GO:0005975|GO:0016837|GO:0030246 MetaCyc: PWY-6769|MetaCyc: PWY-6771 ATY42_RS05220 bfa2f19095dfaaa0e2920923fc1b3abd 533 SUPERFAMILY SSF74650 27 267 1.1E-80 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 ATY42_RS02685 e5d998cb25def8198e5762941a5802b4 110 SUPERFAMILY SSF54913 5 107 6.3E-36 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATY42_RS02685 e5d998cb25def8198e5762941a5802b4 110 Gene3D G3DSA:3.30.70.830 5 108 9.7E-39 T 11-11-2016 ATY42_RS02685 e5d998cb25def8198e5762941a5802b4 110 Pfam PF03091 CutA1 divalent ion tolerance protein 9 104 5.5E-33 T 11-11-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 ATY42_RS16750 8a468fbd78f207a71cd36d1282586e94 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16750 8a468fbd78f207a71cd36d1282586e94 338 Pfam PF12760 Transposase zinc-ribbon domain 40 86 7.3E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS16750 8a468fbd78f207a71cd36d1282586e94 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 SUPERFAMILY SSF109998 31 203 2.88E-40 T 11-11-2016 IPR027304 Trigger factor/SurA domain ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 Hamap MF_01183 Chaperone SurA [surA]. 9 434 31.862 T 11-11-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 Pfam PF09312 SurA N-terminal domain 31 148 8.5E-46 T 11-11-2016 IPR015391 SurA N-terminal ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 SUPERFAMILY SSF54534 290 390 1.24E-27 T 11-11-2016 ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 SUPERFAMILY SSF54534 176 281 5.56E-25 T 11-11-2016 ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 Pfam PF00639 PPIC-type PPIASE domain 181 275 5.2E-15 T 11-11-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 Pfam PF13616 PPIC-type PPIASE domain 284 385 3.2E-25 T 11-11-2016 ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 Gene3D G3DSA:3.10.50.40 170 281 3.6E-26 T 11-11-2016 ATY42_RS18860 6b26f456cc863b5e8d9948ae89aadb65 463 Gene3D G3DSA:3.10.50.40 286 412 1.4E-34 T 11-11-2016 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Gene3D G3DSA:3.30.565.10 15 213 1.5E-74 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 SUPERFAMILY SSF56719 387 620 8.89E-74 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 66 79 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 413 427 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 516 528 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 109 123 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 496 513 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 31 46 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 265 278 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 478 494 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR00418 DNA topoisomerase II family signature 561 577 2.7E-57 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Pfam PF01751 Toprim domain 412 509 1.1E-11 T 11-11-2016 IPR006171 Toprim domain ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 627 46.069 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Gene3D G3DSA:3.30.230.10 216 389 1.1E-43 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 5.2E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 337 360 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 361 386 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 502 518 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 447 468 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 536 558 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 468 480 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 310 325 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 293 309 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 583 597 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.4E-97 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 557 619 6.0E-23 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 SUPERFAMILY SSF54211 217 380 3.79E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 SMART SM00387 27 173 1.1E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 ProSitePatterns PS00177 DNA topoisomerase II signature. 415 423 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Pfam PF00204 DNA gyrase B 218 383 5.9E-36 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 Gene3D G3DSA:3.40.50.670 397 610 6.2E-74 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 SUPERFAMILY SSF55874 4 215 4.71E-65 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 624 2.3E-287 T 11-11-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS14835 8cbb55fb00cd350ff369cb865514eab3 629 SMART SM00433 34 623 3.8E-198 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 SMART SM00354 13 83 7.1E-16 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 Gene3D G3DSA:3.40.50.2300 189 326 2.1E-48 T 11-11-2016 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 SUPERFAMILY SSF47413 13 72 1.97E-14 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 Pfam PF13377 Periplasmic binding protein-like domain 185 342 3.3E-38 T 11-11-2016 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 SUPERFAMILY SSF53822 87 342 9.03E-58 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 Gene3D G3DSA:3.40.50.2300 66 188 4.5E-28 T 11-11-2016 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 11-11-2016 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 58 2.4E-11 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS05325 ebf7923e1d0cbb3b5acbe345842ab72b 343 Gene3D G3DSA:1.10.260.40 15 65 5.5E-20 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS21635 8244979ecd5b64517a75f5db3c3d7d7f 225 SUPERFAMILY SSF46689 11 129 6.09E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS21635 8244979ecd5b64517a75f5db3c3d7d7f 225 Pfam PF13551 Winged helix-turn helix 18 77 4.3E-15 T 11-11-2016 ATY42_RS21635 8244979ecd5b64517a75f5db3c3d7d7f 225 Pfam PF13592 Winged helix-turn helix 96 153 4.7E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Pfam PF13291 ACT domain 646 722 3.6E-16 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Gene3D G3DSA:3.30.460.10 198 344 1.2E-40 T 11-11-2016 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Pfam PF13328 HD domain 46 195 6.5E-51 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Gene3D G3DSA:3.30.70.260 648 720 1.4E-10 T 11-11-2016 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 SUPERFAMILY SSF81271 395 467 1.24E-18 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Pfam PF04607 Region found in RelA / SpoT proteins 255 363 1.2E-32 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 46 718 3.7E-224 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 SUPERFAMILY SSF81301 201 412 4.58E-57 T 11-11-2016 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 SUPERFAMILY SSF109604 26 210 1.07E-70 T 11-11-2016 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 SUPERFAMILY SSF55021 651 721 1.07E-7 T 11-11-2016 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Gene3D G3DSA:3.10.20.30 407 469 1.3E-19 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 SMART SM00954 255 365 1.8E-58 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 SMART SM00471 61 173 1.7E-10 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS05600 f31629bdd57b8cb720abc6f9a52b7269 723 Pfam PF02824 TGS domain 408 467 2.5E-16 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 ATY42_RS18780 65a3443c7a441a6bbcd46c4730fa45bc 489 SUPERFAMILY SSF53720 16 488 8.9E-138 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS18780 65a3443c7a441a6bbcd46c4730fa45bc 489 Gene3D G3DSA:3.40.309.10 275 452 6.1E-54 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS18780 65a3443c7a441a6bbcd46c4730fa45bc 489 Pfam PF00171 Aldehyde dehydrogenase family 25 486 1.7E-140 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS18780 65a3443c7a441a6bbcd46c4730fa45bc 489 Gene3D G3DSA:3.40.605.10 17 274 2.3E-75 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS08665 cb55fbb2f47ce3a50b41caf42cfb0b01 355 Pfam PF00704 Glycosyl hydrolases family 18 46 340 1.8E-26 T 11-11-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 ATY42_RS08665 cb55fbb2f47ce3a50b41caf42cfb0b01 355 Gene3D G3DSA:3.20.20.80 318 350 1.1E-33 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08665 cb55fbb2f47ce3a50b41caf42cfb0b01 355 Gene3D G3DSA:3.20.20.80 46 250 1.1E-33 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08665 cb55fbb2f47ce3a50b41caf42cfb0b01 355 SUPERFAMILY SSF51445 314 346 5.94E-42 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS08665 cb55fbb2f47ce3a50b41caf42cfb0b01 355 SUPERFAMILY SSF51445 46 248 5.94E-42 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS08665 cb55fbb2f47ce3a50b41caf42cfb0b01 355 SMART SM00636 28 342 4.0E-20 T 11-11-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 ATY42_RS23045 6b71347dc07167e00a98b78218535557 106 PIRSF PIRSF028538 1 106 4.6E-50 T 11-11-2016 IPR014949 Protein of unknown function DUF1820 ATY42_RS23045 6b71347dc07167e00a98b78218535557 106 Pfam PF08850 Domain of unknown function (DUF1820) 5 100 6.4E-37 T 11-11-2016 IPR014949 Protein of unknown function DUF1820 ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 Gene3D G3DSA:3.30.565.10 301 437 4.8E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 Gene3D G3DSA:1.10.287.130 223 292 2.1E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 SMART SM00388 230 296 1.5E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 433 3.4E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 SUPERFAMILY SSF55874 301 437 4.45E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 232 296 3.9E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 Pfam PF00672 HAMP domain 156 225 8.5E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 SMART SM00387 336 439 3.0E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05885 6f11fcdfef168a8d74c0830babf4ed8f 439 SUPERFAMILY SSF47384 213 296 2.55E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01615 fc1a78a4afc57bc6b1709e23b3aa9e84 214 Pfam PF02036 SCP-2 sterol transfer family 21 121 2.3E-15 T 11-11-2016 IPR003033 SCP2 sterol-binding domain ATY42_RS18770 269e3ece3b8fd9ab94afdb46a59c5ebe 157 Gene3D G3DSA:1.10.10.10 5 139 2.1E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18770 269e3ece3b8fd9ab94afdb46a59c5ebe 157 Pfam PF12802 MarR family 34 91 3.3E-9 T 11-11-2016 ATY42_RS18770 269e3ece3b8fd9ab94afdb46a59c5ebe 157 SUPERFAMILY SSF46785 5 140 1.27E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18770 269e3ece3b8fd9ab94afdb46a59c5ebe 157 SMART SM00347 28 127 2.6E-9 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS22770 47cecee4d7c795bcd3ed5945908f6e93 157 Pfam PF07308 Protein of unknown function (DUF1456) 3 72 1.4E-24 T 11-11-2016 IPR009921 Domain of unknown function DUF1456 ATY42_RS22770 47cecee4d7c795bcd3ed5945908f6e93 157 Pfam PF07308 Protein of unknown function (DUF1456) 88 154 3.0E-24 T 11-11-2016 IPR009921 Domain of unknown function DUF1456 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 SUPERFAMILY SSF161093 280 451 2.48E-48 T 11-11-2016 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 SMART SM00924 36 139 1.1E-37 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 Pfam PF01769 Divalent cation transporter 323 444 2.0E-25 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 Gene3D G3DSA:3.10.580.10 130 264 2.5E-15 T 11-11-2016 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 Pfam PF03448 MgtE intracellular N domain 37 137 1.8E-27 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 Pfam PF00571 CBS domain 221 257 9.3E-4 T 11-11-2016 IPR000644 CBS domain ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 Gene3D G3DSA:1.10.357.20 282 451 1.4E-50 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 SUPERFAMILY SSF54631 138 277 2.15E-25 T 11-11-2016 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 SUPERFAMILY SSF158791 13 136 9.29E-30 T 11-11-2016 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 TIGRFAM TIGR00400 mgtE: magnesium transporter 21 451 1.1E-86 T 11-11-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 ATY42_RS06260 f6386de30ab9b76565fbc56ea1efdfa7 453 Gene3D G3DSA:1.25.60.10 11 129 3.7E-25 T 11-11-2016 ATY42_RS09610 bf42b8665ca4ba3d4977d99c808cd3e8 241 SUPERFAMILY SSF49354 27 127 2.88E-14 T 11-11-2016 IPR008962 PapD-like ATY42_RS09610 bf42b8665ca4ba3d4977d99c808cd3e8 241 Gene3D G3DSA:2.60.40.360 31 122 6.0E-8 T 11-11-2016 IPR008962 PapD-like ATY42_RS09610 bf42b8665ca4ba3d4977d99c808cd3e8 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 31 122 1.4E-8 T 11-11-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 SUPERFAMILY SSF46785 258 331 3.73E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 333 4.0E-40 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 7.0E-33 T 11-11-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 SUPERFAMILY SSF52540 21 253 3.43E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 Gene3D G3DSA:1.10.10.10 258 329 9.5E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 2.3E-145 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 SMART SM00382 52 179 3.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 Gene3D G3DSA:1.10.8.60 184 256 7.1E-33 T 11-11-2016 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 236 1.9E-118 T 11-11-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 345 178.651 T 11-11-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ATY42_RS08210 1c48cfab23b7bcf52cacc2933cb40b90 345 Gene3D G3DSA:3.40.50.300 21 176 1.9E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08205 f9df3569600ccadda2f266cd42b8eb13 635 Pfam PF02705 K+ potassium transporter 24 556 2.1E-213 T 11-11-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 ATY42_RS08205 f9df3569600ccadda2f266cd42b8eb13 635 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 15 635 33.598 T 11-11-2016 IPR023051 Potassium uptake protein, low affinity, Kup ATY42_RS00285 1adf70678322948b823f8f938f911f18 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00285 1adf70678322948b823f8f938f911f18 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 9.0E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS00285 1adf70678322948b823f8f938f911f18 332 SMART SM01126 148 293 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 SUPERFAMILY SSF51445 177 730 3.47E-240 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 Gene3D G3DSA:3.20.20.80 176 503 3.2E-149 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 Gene3D G3DSA:3.30.379.10 36 171 9.4E-40 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 SUPERFAMILY SSF55545 35 175 3.49E-37 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 40 154 4.1E-25 T 11-11-2016 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 Gene3D G3DSA:3.90.1330.10 505 729 3.1E-94 T 11-11-2016 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 159 482 4.7E-145 T 11-11-2016 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 484 707 1.7E-91 T 11-11-2016 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 ATY42_RS22205 6b8e28abf6f993386a714c4dd92b2ebe 731 PIRSF PIRSF029900 16 731 1.3E-303 T 11-11-2016 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 SUPERFAMILY SSF51735 6 246 4.5E-81 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 Gene3D G3DSA:3.40.50.720 2 246 6.9E-84 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.3E-46 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.3E-46 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-46 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.3E-46 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.3E-46 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.3E-46 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 2.1E-63 T 11-11-2016 ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 10 245 1.0E-97 T 11-11-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 190 1.6E-4 T 11-11-2016 ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.0E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.0E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS04250 dd008fd0e8ad5cd391a7641417cdc39e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-14 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS17550 9e36ca8769eff4f4892a0651731f6725 743 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 44 256 6.1E-13 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS17550 9e36ca8769eff4f4892a0651731f6725 743 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 270 385 1.8E-16 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS13335 de5c94cc84c1b1d469adfc3cb6910325 393 ProSitePatterns PS00503 Pectinesterase signature 2. 251 260 - T 11-11-2016 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 ATY42_RS13335 de5c94cc84c1b1d469adfc3cb6910325 393 SUPERFAMILY SSF51126 72 392 4.28E-48 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS13335 de5c94cc84c1b1d469adfc3cb6910325 393 Gene3D G3DSA:2.160.20.10 73 391 5.1E-75 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS13335 de5c94cc84c1b1d469adfc3cb6910325 393 Pfam PF01095 Pectinesterase 76 325 9.7E-26 T 11-11-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Gene3D G3DSA:3.30.300.30 460 556 4.5E-29 T 11-11-2016 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 SUPERFAMILY SSF56801 23 557 6.54E-154 T 11-11-2016 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 ProSitePatterns PS00455 Putative AMP-binding domain signature. 213 224 - T 11-11-2016 IPR020845 AMP-binding, conserved site ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Gene3D G3DSA:2.30.38.10 384 456 1.9E-29 T 11-11-2016 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Pfam PF13193 AMP-binding enzyme C-terminal domain 474 548 3.2E-18 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Gene3D G3DSA:3.40.50.980 219 383 2.6E-45 T 11-11-2016 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Pfam PF00501 AMP-binding enzyme 31 465 1.1E-116 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Gene3D G3DSA:3.40.50.980 25 154 7.2E-39 T 11-11-2016 ATY42_RS14320 56198c72bd55f1ef38394136d806641d 560 Gene3D G3DSA:3.40.50.980 187 218 7.2E-39 T 11-11-2016 ATY42_RS05815 cdfa21999b76338481c840559866ec1d 204 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS05815 cdfa21999b76338481c840559866ec1d 204 Gene3D G3DSA:3.40.50.300 23 204 8.3E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05815 cdfa21999b76338481c840559866ec1d 204 SUPERFAMILY SSF52540 12 204 2.6E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05815 cdfa21999b76338481c840559866ec1d 204 Pfam PF00005 ABC transporter 23 157 2.2E-30 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS05815 cdfa21999b76338481c840559866ec1d 204 SMART SM00382 22 203 9.6E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS05815 cdfa21999b76338481c840559866ec1d 204 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 3 204 1.4E-86 T 11-11-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 ATY42_RS18865 eaada066e221bb49ee7cc6f698deb834 323 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 315 4.6E-99 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 ATY42_RS18865 eaada066e221bb49ee7cc6f698deb834 323 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 319 6.1E-115 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 ATY42_RS18865 eaada066e221bb49ee7cc6f698deb834 323 Gene3D G3DSA:3.40.718.10 2 322 2.2E-118 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS18865 eaada066e221bb49ee7cc6f698deb834 323 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 320 34.328 T 11-11-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 ATY42_RS18865 eaada066e221bb49ee7cc6f698deb834 323 SUPERFAMILY SSF53659 4 322 4.25E-103 T 11-11-2016 ATY42_RS09885 81812efcc0b5c65ce644539ea8139393 201 SUPERFAMILY SSF46785 1 79 3.08E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09885 81812efcc0b5c65ce644539ea8139393 201 Pfam PF03466 LysR substrate binding domain 57 179 2.3E-19 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS09885 81812efcc0b5c65ce644539ea8139393 201 Gene3D G3DSA:3.40.190.10 57 169 2.0E-19 T 11-11-2016 ATY42_RS09885 81812efcc0b5c65ce644539ea8139393 201 SUPERFAMILY SSF53850 56 177 1.54E-17 T 11-11-2016 ATY42_RS09885 81812efcc0b5c65ce644539ea8139393 201 Gene3D G3DSA:1.10.10.10 1 48 1.5E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 18 314 2.1E-113 T 11-11-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 473 1.2E-148 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 Gene3D G3DSA:1.20.120.640 309 395 2.2E-12 T 11-11-2016 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 Pfam PF09190 DALR domain 348 417 3.6E-10 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 SUPERFAMILY SSF52374 4 315 7.1E-91 T 11-11-2016 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 SMART SM00840 347 417 2.9E-11 T 11-11-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 SUPERFAMILY SSF47323 317 473 1.44E-30 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 474 37.213 T 11-11-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 7.6E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 7.6E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 7.6E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 7.6E-29 T 11-11-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ATY42_RS13250 645a51d7e0990bfd67b18ffb867dc0c5 474 Gene3D G3DSA:3.40.50.620 24 306 1.4E-98 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 310 386 2.3E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 Pfam PF05569 BlaR1 peptidase M56 8 256 1.1E-70 T 11-11-2016 IPR008756 Peptidase M56 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 Gene3D G3DSA:3.30.1150.10 308 387 2.6E-12 T 11-11-2016 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 309 386 1.2E-19 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 SUPERFAMILY SSF74653 308 384 2.22E-20 T 11-11-2016 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 PRINTS PR01374 Gram-negative bacterial tonB protein signature 304 325 3.1E-5 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 PRINTS PR01374 Gram-negative bacterial tonB protein signature 325 343 3.1E-5 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ATY42_RS05805 ea4267d8e5c1849d0c803616516f4006 438 PRINTS PR01374 Gram-negative bacterial tonB protein signature 344 361 3.1E-5 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ATY42_RS09395 cdbf25290fbabb3ae3537658a21b0132 465 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 11-11-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATY42_RS09395 cdbf25290fbabb3ae3537658a21b0132 465 PIRSF PIRSF006060 1 465 6.7E-76 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS09395 cdbf25290fbabb3ae3537658a21b0132 465 Pfam PF00324 Amino acid permease 20 459 2.3E-109 T 11-11-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 ATY42_RS16895 e22503802c0a994fbe3c56fc2352b910 113 Gene3D G3DSA:2.102.10.10 4 112 1.8E-22 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS16895 e22503802c0a994fbe3c56fc2352b910 113 SUPERFAMILY SSF50022 5 112 8.51E-23 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS16895 e22503802c0a994fbe3c56fc2352b910 113 Pfam PF00355 Rieske [2Fe-2S] domain 29 96 3.3E-11 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 144 161 - T 11-11-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 PIRSF PIRSF000161 4 238 6.0E-72 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 SUPERFAMILY SSF51735 5 121 1.48E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 SUPERFAMILY SSF51735 209 237 1.48E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 SUPERFAMILY SSF55347 122 209 1.79E-22 T 11-11-2016 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 120 8.1E-25 T 11-11-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 123 237 4.1E-32 T 11-11-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 Gene3D G3DSA:3.30.360.10 176 207 4.0E-6 T 11-11-2016 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 238 28.752 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 Gene3D G3DSA:3.40.50.720 3 153 3.1E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14410 2b033dcd3e485139dbd4751888e873d9 238 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 168 6.3E-42 T 11-11-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SMART SM00091 30 103 120.0 T 11-11-2016 IPR000014 PAS domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SMART SM00091 157 223 6.0E-9 T 11-11-2016 IPR000014 PAS domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SMART SM00448 552 670 2.3E-30 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Gene3D G3DSA:3.30.450.20 144 269 3.5E-28 T 11-11-2016 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Pfam PF08448 PAS fold 164 273 5.7E-14 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Pfam PF13188 PAS domain 32 92 0.021 T 11-11-2016 IPR000014 PAS domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Gene3D G3DSA:3.40.50.2300 550 673 3.3E-32 T 11-11-2016 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 3.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 3.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 500 3.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 3.0E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SUPERFAMILY SSF47384 284 361 1.53E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Pfam PF00512 His Kinase A (phospho-acceptor) domain 299 361 2.3E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SUPERFAMILY SSF55785 57 153 1.47E-10 T 11-11-2016 IPR000014 PAS domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Pfam PF00072 Response regulator receiver domain 555 671 8.8E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SUPERFAMILY SSF55874 353 525 1.44E-47 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SMART SM00387 410 523 2.9E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 153 276 1.1E-16 T 11-11-2016 IPR000014 PAS domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Gene3D G3DSA:3.30.450.20 31 143 2.9E-11 T 11-11-2016 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SUPERFAMILY SSF55785 142 269 1.33E-28 T 11-11-2016 IPR000014 PAS domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SMART SM00086 229 271 3.5E-6 T 11-11-2016 IPR001610 PAC motif ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SUPERFAMILY SSF52172 550 674 2.7E-32 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 SMART SM00388 298 364 5.6E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 522 3.7E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Gene3D G3DSA:1.10.287.130 291 359 7.4E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS03350 b2980cad4717410a1264d3e71efc3089 678 Gene3D G3DSA:3.30.565.10 365 525 9.5E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS16700 19adb89534f694e7b213c5ebc640bd57 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS16700 19adb89534f694e7b213c5ebc640bd57 338 SMART SM01126 154 299 1.0E-48 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16700 19adb89534f694e7b213c5ebc640bd57 338 Pfam PF12762 ISXO2-like transposase domain 154 299 2.5E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16745 8015c66d4a5f40ccd9e1c75d24690bc9 404 SUPERFAMILY SSF53098 15 367 2.81E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16745 8015c66d4a5f40ccd9e1c75d24690bc9 404 Pfam PF01609 Transposase DDE domain 89 329 1.7E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22635 6ce3e053d2fca7a51dc78ba53c3ce525 206 SMART SM00530 13 68 3.7E-9 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS22635 6ce3e053d2fca7a51dc78ba53c3ce525 206 SUPERFAMILY SSF47413 8 65 2.15E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22635 6ce3e053d2fca7a51dc78ba53c3ce525 206 Pfam PF13560 Helix-turn-helix domain 11 64 8.4E-10 T 11-11-2016 ATY42_RS22635 6ce3e053d2fca7a51dc78ba53c3ce525 206 Gene3D G3DSA:1.10.260.40 8 66 4.7E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22635 6ce3e053d2fca7a51dc78ba53c3ce525 206 TIGRFAM TIGR03070 couple_hipB: transcriptional regulator, y4mF family 9 65 2.0E-24 T 11-11-2016 IPR017507 Transcription regulator, HipB-like ATY42_RS19865 98570d34886e1c388772f47a21f434ba 319 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 69 308 1.2E-20 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS19865 98570d34886e1c388772f47a21f434ba 319 SUPERFAMILY SSF56219 52 318 9.81E-41 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS19865 98570d34886e1c388772f47a21f434ba 319 Gene3D G3DSA:3.60.10.10 66 292 2.0E-14 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 374 404 - T 11-11-2016 IPR030390 RNA methyltransferase TrmA, active site ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 426 436 - T 11-11-2016 IPR030391 RNA methyltransferase TrmA, conserved site ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 SUPERFAMILY SSF50249 13 73 4.97E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 Gene3D G3DSA:2.40.50.140 13 86 5.8E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 SUPERFAMILY SSF53335 75 443 5.91E-79 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 264 436 6.7E-56 T 11-11-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 14 444 67.754 T 11-11-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 Gene3D G3DSA:3.40.50.150 262 443 1.4E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09010 04d0506c66eba15cfb6abddde314488f 444 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 274 443 1.7E-23 T 11-11-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ATY42_RS20140 20542b0d2c024a2567e734cc96baf9c5 222 Pfam PF02230 Phospholipase/Carboxylesterase 14 216 1.3E-45 T 11-11-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 ATY42_RS20140 20542b0d2c024a2567e734cc96baf9c5 222 SUPERFAMILY SSF53474 9 218 1.38E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20140 20542b0d2c024a2567e734cc96baf9c5 222 Gene3D G3DSA:3.40.50.1820 11 218 7.1E-64 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 SMART SM00829 20 339 2.4E-6 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 Pfam PF00107 Zinc-binding dehydrogenase 161 298 3.9E-19 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 SUPERFAMILY SSF50129 5 146 1.1E-38 T 11-11-2016 IPR011032 GroES-like ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 SUPERFAMILY SSF51735 127 305 9.28E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 Gene3D G3DSA:3.90.180.10 2 143 1.0E-53 T 11-11-2016 IPR011032 GroES-like ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 Pfam PF16884 N-terminal domain of oxidoreductase 7 109 7.6E-36 T 11-11-2016 ATY42_RS22735 9866d94d7414775f2601dc8dfe5a08be 342 Gene3D G3DSA:3.40.50.720 144 309 1.4E-61 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 2.3E-67 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 2.3E-67 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 2.3E-67 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 2.3E-67 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 2.3E-67 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 2.3E-67 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 SUPERFAMILY SSF55681 10 293 1.24E-131 T 11-11-2016 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 301 5.0E-158 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 294 59.204 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 293 6.2E-146 T 11-11-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 Gene3D G3DSA:1.20.58.180 218 298 3.8E-36 T 11-11-2016 ATY42_RS22110 5d1c9d9ad6b0f240c5259c90ac7dc9b4 302 Gene3D G3DSA:3.30.930.10 8 217 9.8E-103 T 11-11-2016 ATY42_RS06290 26d21e354b64ff713f0d7b44b850bbf4 152 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 11-11-2016 IPR002178 PTS EIIA type-2 domain ATY42_RS06290 26d21e354b64ff713f0d7b44b850bbf4 152 Gene3D G3DSA:3.40.930.10 15 143 1.3E-36 T 11-11-2016 IPR002178 PTS EIIA type-2 domain ATY42_RS06290 26d21e354b64ff713f0d7b44b850bbf4 152 SUPERFAMILY SSF55804 15 143 1.44E-32 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 ATY42_RS06290 26d21e354b64ff713f0d7b44b850bbf4 152 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 16 142 2.3E-30 T 11-11-2016 IPR002178 PTS EIIA type-2 domain ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 466 486 5.5E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 466 5.5E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 Pfam PF02954 Bacterial regulatory protein, Fis family 444 483 1.4E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 Pfam PF00158 Sigma-54 interaction domain 140 305 3.2E-71 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 Gene3D G3DSA:3.40.50.300 138 310 1.1E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 SMART SM00382 158 305 3.6E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 Gene3D G3DSA:1.10.10.60 424 486 4.4E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 Gene3D G3DSA:1.10.8.60 311 383 1.7E-21 T 11-11-2016 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 Pfam PF06490 Flagellar regulatory protein FleQ 5 120 4.2E-20 T 11-11-2016 IPR010518 Flagellar regulatory FleQ ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 SUPERFAMILY SSF52540 140 379 1.16E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 SUPERFAMILY SSF52172 2 180 8.2E-5 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 162 175 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 SUPERFAMILY SSF46689 433 486 9.41E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 SUPERFAMILY SSF46689 350 393 9.41E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12835 b2c9b937dd13f8fc73e891ee49a5706a 494 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site ATY42_RS15215 9fc3cae5d9a48c8d52c5fbf7d47f6394 158 Pfam PF01609 Transposase DDE domain 1 155 2.7E-23 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS23300 82ea4680bed88da1e5585414cf608c42 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 28 1.0E-7 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS23300 82ea4680bed88da1e5585414cf608c42 46 Pfam PF00468 Ribosomal protein L34 3 46 5.2E-25 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS23300 82ea4680bed88da1e5585414cf608c42 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 1.2E-25 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS23300 82ea4680bed88da1e5585414cf608c42 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 11-11-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS23300 82ea4680bed88da1e5585414cf608c42 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 16.576 T 11-11-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 Gene3D G3DSA:3.40.190.10 174 246 2.3E-17 T 11-11-2016 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 Pfam PF03466 LysR substrate binding domain 95 276 2.1E-33 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 SUPERFAMILY SSF53850 95 276 2.53E-33 T 11-11-2016 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 SUPERFAMILY SSF46785 3 86 1.85E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 1.7E-20 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-8 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 Gene3D G3DSA:3.40.190.10 95 173 4.8E-27 T 11-11-2016 ATY42_RS06745 001660ef3f0b0fd85319c0625380ea33 281 Gene3D G3DSA:1.10.10.10 3 86 3.8E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 SUPERFAMILY SSF82171 53 138 4.97E-34 T 11-11-2016 ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 SUPERFAMILY SSF82171 179 512 4.97E-34 T 11-11-2016 ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 Gene3D G3DSA:3.40.50.1820 519 761 1.8E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 SUPERFAMILY SSF53474 520 763 1.82E-42 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 Pfam PF00326 Prolyl oligopeptidase family 565 762 7.6E-43 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 Gene3D G3DSA:2.140.10.30 47 514 8.6E-66 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS15650 efb24bd4752df1ac96ec5e4b00f4ac3a 781 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 176 483 1.3E-48 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 Pfam PF03449 Transcription elongation factor, N-terminal 14 83 7.6E-25 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 Hamap MF_00930 Transcription elongation factor GreB [greB]. 10 166 51.704 T 11-11-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 129 145 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 26 57 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 PIRSF PIRSF006092 8 167 1.5E-48 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 Gene3D G3DSA:1.10.287.180 12 84 3.1E-24 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 12 166 2.8E-61 T 11-11-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 92 165 8.4E-25 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 Gene3D G3DSA:3.10.50.30 85 165 1.1E-25 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 Hamap MF_00105 Transcription elongation factor GreA [greA]. 11 164 28.477 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 SUPERFAMILY SSF54534 89 165 1.44E-21 T 11-11-2016 ATY42_RS16440 5d0b7a1fd4829927d19cd45f2842bb7a 168 SUPERFAMILY SSF46557 13 86 5.23E-24 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 38 53 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 SUPERFAMILY SSF53335 22 249 1.05E-43 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 Gene3D G3DSA:3.40.50.150 27 248 4.2E-53 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 18 252 37.861 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 160 174 - T 11-11-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 27 252 7.2E-81 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ATY42_RS20015 4c6ee1277ae3c2fd99d6a925857c760d 253 Pfam PF01209 ubiE/COQ5 methyltransferase family 23 252 4.4E-90 T 11-11-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ATY42_RS13725 e03ab24161f4d1839767f2ba2fdfa14b 161 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 155 23.638 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ATY42_RS13725 e03ab24161f4d1839767f2ba2fdfa14b 161 SUPERFAMILY SSF55486 24 157 4.15E-44 T 11-11-2016 ATY42_RS13725 e03ab24161f4d1839767f2ba2fdfa14b 161 Pfam PF02130 Uncharacterized protein family UPF0054 27 150 4.4E-35 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ATY42_RS13725 e03ab24161f4d1839767f2ba2fdfa14b 161 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 43 152 1.8E-36 T 11-11-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ATY42_RS13725 e03ab24161f4d1839767f2ba2fdfa14b 161 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 121 131 - T 11-11-2016 IPR020549 Endoribonuclease YbeY, conserved site ATY42_RS13725 e03ab24161f4d1839767f2ba2fdfa14b 161 Gene3D G3DSA:3.40.390.30 24 158 5.0E-47 T 11-11-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 ATY42_RS10890 020ad344fab37879680f3336616e91c7 421 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 17 413 28.617 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATY42_RS10890 020ad344fab37879680f3336616e91c7 421 Pfam PF04551 GcpE protein 22 409 4.3E-107 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATY42_RS10890 020ad344fab37879680f3336616e91c7 421 PIRSF PIRSF004640 12 419 2.6E-124 T 11-11-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATY42_RS10890 020ad344fab37879680f3336616e91c7 421 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 19 408 1.7E-116 T 11-11-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ATY42_RS21455 d765caab74766f7d34e9c52f57cd72ba 172 Gene3D G3DSA:2.60.120.10 65 123 3.5E-5 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS21455 d765caab74766f7d34e9c52f57cd72ba 172 SUPERFAMILY SSF51182 66 159 3.2E-8 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 Gene3D G3DSA:3.30.70.580 1 106 1.8E-31 T 11-11-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 4 239 8.5E-58 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 PIRSF PIRSF001430 1 255 2.6E-63 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 Gene3D G3DSA:3.30.70.660 108 240 4.5E-42 T 11-11-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 30.58 T 11-11-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 SUPERFAMILY SSF55120 1 252 5.61E-80 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 Pfam PF01416 tRNA pseudouridine synthase 8 104 2.7E-6 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16360 7342d5b326cdf9f2dd8716482365f8e4 257 Pfam PF01416 tRNA pseudouridine synthase 144 241 3.1E-25 T 11-11-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 Pfam PF10415 Fumarase C C-terminus 403 456 5.8E-19 T 11-11-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 457 78.352 T 11-11-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 Gene3D G3DSA:1.10.275.10 4 133 7.2E-52 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 1.7E-32 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 1.7E-32 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 1.7E-32 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 1.7E-32 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 4.2E-6 T 11-11-2016 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 4.2E-6 T 11-11-2016 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 4.2E-6 T 11-11-2016 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 Gene3D G3DSA:1.10.40.30 413 459 5.8E-20 T 11-11-2016 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 Gene3D G3DSA:1.20.200.10 134 412 3.4E-91 T 11-11-2016 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 Pfam PF00206 Lyase 13 337 8.1E-101 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal ATY42_RS09990 cf23bdc9fa8fbede1c151a1efb9757cb 467 SUPERFAMILY SSF48557 5 455 1.15E-141 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Gene3D G3DSA:3.40.50.2300 6 135 2.3E-34 T 11-11-2016 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 SUPERFAMILY SSF46689 354 462 3.72E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Pfam PF00072 Response regulator receiver domain 8 114 9.0E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 SMART SM00448 5 116 6.4E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 443 463 2.1E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 426 443 2.1E-10 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 SUPERFAMILY SSF52172 4 183 3.84E-42 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Pfam PF00158 Sigma-54 interaction domain 141 306 4.2E-66 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Gene3D G3DSA:1.10.10.60 410 463 4.8E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 SUPERFAMILY SSF52540 141 382 8.79E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Pfam PF02954 Bacterial regulatory protein, Fis family 420 460 1.2E-14 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 SMART SM00382 160 303 3.0E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Gene3D G3DSA:3.40.50.300 137 312 1.7E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ATY42_RS07810 cc93adcb941b157297df4a8258c1a2fb 463 Gene3D G3DSA:1.10.8.60 313 385 9.1E-22 T 11-11-2016 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 Gene3D G3DSA:4.10.640.10 8 74 6.5E-31 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 4.0E-23 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 5.6E-17 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 5.6E-17 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 5.6E-17 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 5.6E-17 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 2.7E-35 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 SUPERFAMILY SSF46911 3 74 8.37E-28 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 Pfam PF01084 Ribosomal protein S18 18 68 1.3E-23 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 20.642 T 11-11-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11990 1d524e9dd4238bc37cf5ce82877566aa 76 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-11-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 SMART SM00450 11 141 1.4E-17 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 SMART SM00450 165 284 2.4E-11 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 SUPERFAMILY SSF52821 5 151 3.54E-38 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 Gene3D G3DSA:3.40.250.10 160 289 4.1E-34 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 Gene3D G3DSA:3.40.250.10 2 153 2.0E-45 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 SUPERFAMILY SSF52821 160 289 2.88E-29 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 Pfam PF00581 Rhodanese-like domain 167 279 1.5E-8 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12145 96d97f214ace07f8c47a4e2dbe28026d 290 Pfam PF00581 Rhodanese-like domain 14 137 3.0E-16 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SMART SM00267 356 528 1.8E-50 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 365 527 7.9E-37 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 Pfam PF00563 EAL domain 547 781 1.1E-55 T 11-11-2016 IPR001633 EAL domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 Gene3D G3DSA:3.30.450.20 233 354 2.2E-15 T 11-11-2016 ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SUPERFAMILY SSF55073 372 530 2.12E-43 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 Pfam PF00990 Diguanylate cyclase, GGDEF domain 367 524 1.5E-38 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SUPERFAMILY SSF55785 232 354 4.36E-15 T 11-11-2016 IPR000014 PAS domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SMART SM00086 314 356 5.6E-4 T 11-11-2016 IPR001610 PAC motif ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SMART SM00052 540 786 2.4E-49 T 11-11-2016 IPR001633 EAL domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SMART SM00091 244 310 9.4E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 Gene3D G3DSA:3.20.20.450 545 787 1.2E-65 T 11-11-2016 IPR001633 EAL domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 242 357 4.3E-14 T 11-11-2016 IPR000014 PAS domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 SUPERFAMILY SSF141868 547 789 6.67E-65 T 11-11-2016 IPR001633 EAL domain ATY42_RS07620 615067f644fbb02e84b7dad1050db50f 798 Gene3D G3DSA:3.30.70.270 369 530 8.6E-48 T 11-11-2016 ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 SUPERFAMILY SSF69279 216 381 7.14E-15 T 11-11-2016 ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 SUPERFAMILY SSF69255 381 487 3.14E-22 T 11-11-2016 ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 33 541 2.9E-72 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 SUPERFAMILY SSF69279 28 201 4.31E-45 T 11-11-2016 ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 Pfam PF05954 Phage late control gene D protein (GPD) 41 343 2.6E-70 T 11-11-2016 ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 518 621 2.0E-29 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 671 819 6.8E-46 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 Gene3D G3DSA:2.40.50.230 387 487 8.7E-28 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 28 540 2.4E-86 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS17535 500031e6b29b58088f6bff7357664f54 905 Gene3D G3DSA:3.55.50.10 109 207 3.3E-24 T 11-11-2016 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SMART SM00316 735 818 9.5E-11 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 Pfam PF00773 RNB domain 361 688 2.2E-102 T 11-11-2016 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 Gene3D G3DSA:1.10.10.10 124 153 6.3E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SUPERFAMILY SSF50249 168 248 9.68E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SUPERFAMILY SSF50249 239 338 3.51E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SMART SM00357 187 246 2.2E-12 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 Hamap MF_01895 Ribonuclease R [rnr]. 141 818 57.049 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 177 817 2.6E-206 T 11-11-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 Pfam PF00575 S1 RNA binding domain 736 815 4.0E-11 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SUPERFAMILY SSF50249 326 735 1.94E-138 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 Gene3D G3DSA:2.40.50.140 739 819 1.2E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SUPERFAMILY SSF50249 738 817 3.43E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 ProSitePatterns PS01175 Ribonuclease II family signature. 656 680 - T 11-11-2016 IPR022966 Ribonuclease II/R, conserved site ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 TIGRFAM TIGR02063 RNase_R: ribonuclease R 122 818 4.8E-257 T 11-11-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 Pfam PF08206 Ribonuclease B OB domain 188 245 5.5E-22 T 11-11-2016 IPR013223 Ribonuclease B, N-terminal OB domain ATY42_RS10120 0f5f5854b327187aabe66cc37deb7d8a 842 SMART SM00955 361 689 6.5E-174 T 11-11-2016 ATY42_RS07770 77cc3bbd7dbe309b44f9f65dcb474ac9 141 Gene3D G3DSA:3.30.700.10 7 138 1.1E-38 T 11-11-2016 ATY42_RS07770 77cc3bbd7dbe309b44f9f65dcb474ac9 141 Pfam PF00114 Pilin (bacterial filament) 35 137 1.2E-14 T 11-11-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 ATY42_RS07770 77cc3bbd7dbe309b44f9f65dcb474ac9 141 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 7.0E-13 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS07770 77cc3bbd7dbe309b44f9f65dcb474ac9 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS07770 77cc3bbd7dbe309b44f9f65dcb474ac9 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.0E-10 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS07770 77cc3bbd7dbe309b44f9f65dcb474ac9 141 SUPERFAMILY SSF54523 7 137 9.94E-27 T 11-11-2016 ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 SUPERFAMILY SSF69279 404 420 1.48E-17 T 11-11-2016 ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 SUPERFAMILY SSF69279 226 360 1.48E-17 T 11-11-2016 ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 23 358 1.8E-59 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 SUPERFAMILY SSF69279 23 217 9.07E-50 T 11-11-2016 ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 36 538 1.5E-75 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 Gene3D G3DSA:2.40.50.230 439 534 4.8E-29 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 587 686 1.8E-26 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 Pfam PF05954 Phage late control gene D protein (GPD) 45 359 4.5E-78 T 11-11-2016 ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 Gene3D G3DSA:3.55.50.10 113 221 4.8E-29 T 11-11-2016 ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 728 889 2.4E-32 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS17470 785dc322aec0f3542ec2f32a3e62fd0f 923 SUPERFAMILY SSF69255 432 534 1.26E-22 T 11-11-2016 ATY42_RS13880 164a6527352c0b05e78d3be61fb07a8c 327 Pfam PF05598 Transposase domain (DUF772) 50 124 2.4E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS13880 164a6527352c0b05e78d3be61fb07a8c 327 Pfam PF01609 Transposase DDE domain 136 311 1.6E-31 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04995 0a07aeb29b0331317e33370cdb1e3aa7 218 SUPERFAMILY SSF53335 80 170 1.8E-12 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS04995 0a07aeb29b0331317e33370cdb1e3aa7 218 Gene3D G3DSA:3.40.50.150 76 171 1.2E-5 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS04995 0a07aeb29b0331317e33370cdb1e3aa7 218 PIRSF PIRSF028445 1 218 2.4E-127 T 11-11-2016 IPR016885 Uncharacterised conserved protein UCP028445 ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 Gene3D G3DSA:3.60.20.10 403 644 6.0E-75 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 Gene3D G3DSA:3.60.20.10 254 339 6.0E-75 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 PIRSF PIRSF001227 4 803 7.6E-137 T 11-11-2016 IPR014395 Penicillin acylase GO:0016811 ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 SUPERFAMILY SSF56235 42 803 1.44E-160 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 Pfam PF01804 Penicillin amidase 46 794 4.7E-124 T 11-11-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 Gene3D G3DSA:2.30.120.10 346 394 7.5E-9 T 11-11-2016 ATY42_RS09695 da359a2838e7fabe4537d91aa1a09fb4 805 Gene3D G3DSA:1.10.439.10 31 195 1.6E-40 T 11-11-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 ATY42_RS05080 e4dcf90105be84ddf6773a29c6bc8e12 228 Pfam PF00589 Phage integrase family 53 168 2.5E-5 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS05080 e4dcf90105be84ddf6773a29c6bc8e12 228 Gene3D G3DSA:1.10.443.10 51 211 3.8E-9 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS05080 e4dcf90105be84ddf6773a29c6bc8e12 228 SUPERFAMILY SSF56349 2 212 1.06E-23 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 SMART SM00433 45 807 2.2E-251 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 SMART SM00387 41 185 6.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Gene3D G3DSA:3.30.565.10 15 222 2.3E-84 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 742 803 2.0E-29 T 11-11-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 814 2.1E-294 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 515 532 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 535 547 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 430 444 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 80 93 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 123 137 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 278 291 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 45 60 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 746 762 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR00418 DNA topoisomerase II family signature 497 513 3.2E-70 T 11-11-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 SUPERFAMILY SSF55874 15 220 4.22E-68 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Gene3D G3DSA:3.30.230.10 230 402 7.1E-72 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Gene3D G3DSA:3.40.50.670 414 560 8.4E-96 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Gene3D G3DSA:3.40.50.670 728 796 8.4E-96 T 11-11-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 SUPERFAMILY SSF56719 740 805 4.97E-83 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 SUPERFAMILY SSF56719 404 570 4.97E-83 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Pfam PF00204 DNA gyrase B 231 400 3.6E-57 T 11-11-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Pfam PF01751 Toprim domain 429 534 2.9E-17 T 11-11-2016 IPR006171 Toprim domain ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 SUPERFAMILY SSF54211 231 401 4.74E-56 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 182 3.9E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 ProSitePatterns PS00177 DNA topoisomerase II signature. 432 440 - T 11-11-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 814 97.15 T 11-11-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 230 252 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 370 384 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 205 218 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 480 489 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 767 779 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 384 404 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 190 205 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 783 799 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS00020 9863f63dcb7a644cefff80258b79d266 814 PRINTS PR01159 DNA gyrase subunit B signature 322 338 1.7E-73 T 11-11-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Gene3D G3DSA:3.40.50.300 4 130 7.8E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Gene3D G3DSA:3.40.50.300 201 266 7.8E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 44.31 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.6E-154 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.0E-34 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 SUPERFAMILY SSF52540 3 301 3.74E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.2E-37 T 11-11-2016 IPR013029 Domain of unknown function DUF933 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Pfam PF01926 50S ribosome-binding GTPase 5 128 7.1E-22 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Gene3D G3DSA:3.10.20.30 267 363 3.2E-47 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 PIRSF PIRSF006641 1 363 1.3E-152 T 11-11-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 Gene3D G3DSA:1.10.150.300 131 200 7.5E-26 T 11-11-2016 IPR023192 TGS-like domain ATY42_RS18140 252cab85a30c1b9739a02e20b2775daf 363 SUPERFAMILY SSF81271 279 360 1.77E-34 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ATY42_RS08535 df227019d43ca1d41a54f40b81f5a521 562 SMART SM00369 307 331 6.4 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS08535 df227019d43ca1d41a54f40b81f5a521 562 SMART SM00369 157 180 4.5 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS08535 df227019d43ca1d41a54f40b81f5a521 562 SMART SM00369 213 236 23.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS08535 df227019d43ca1d41a54f40b81f5a521 562 SUPERFAMILY SSF52058 110 332 3.74E-33 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like ATY42_RS08535 df227019d43ca1d41a54f40b81f5a521 562 Gene3D G3DSA:3.80.10.10 111 332 2.6E-32 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like ATY42_RS08535 df227019d43ca1d41a54f40b81f5a521 562 Pfam PF00560 Leucine Rich Repeat 309 329 0.27 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 ATY42_RS05510 d4258a6a7f9b6e9aecb8cc49d0f6cc2e 180 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 167 8.3E-28 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 ATY42_RS05510 d4258a6a7f9b6e9aecb8cc49d0f6cc2e 180 SUPERFAMILY SSF101327 4 168 6.02E-39 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 ATY42_RS05510 d4258a6a7f9b6e9aecb8cc49d0f6cc2e 180 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 2 180 30.56 T 11-11-2016 IPR011978 Uncharacterised protein family UPF0149 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 SUPERFAMILY SSF48179 167 298 4.97E-41 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 169 279 8.5E-22 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 112 137 2.8E-38 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 2.8E-38 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 24 2.8E-38 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 158 186 2.8E-38 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 59 88 2.8E-38 T 11-11-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 Gene3D G3DSA:3.40.50.720 1 170 1.3E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 8.0E-43 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 SMART SM01350 169 313 2.0E-6 T 11-11-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-11-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 SUPERFAMILY SSF51735 1 155 3.94E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 299 1.3E-116 T 11-11-2016 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 ATY42_RS19820 4bcba154c159ed9582fb36f774032596 313 Gene3D G3DSA:1.10.1040.10 171 289 3.6E-34 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS15315 c3f64faebe93b484bc3e5add49d1fde1 167 SUPERFAMILY SSF141452 2 165 1.57E-40 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS15315 c3f64faebe93b484bc3e5add49d1fde1 167 Pfam PF05638 Type VI secretion system effector, Hcp 12 140 4.8E-29 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS15315 c3f64faebe93b484bc3e5add49d1fde1 167 Gene3D G3DSA:2.30.110.20 1 166 9.2E-49 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 Gene3D G3DSA:3.40.50.1370 159 321 9.5E-48 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 SUPERFAMILY SSF53671 2 335 9.22E-74 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 2.1E-10 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 PRINTS PR00101 Aspartate carbamoyltransferase signature 147 164 2.1E-10 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 PRINTS PR00101 Aspartate carbamoyltransferase signature 315 329 2.1E-10 T 11-11-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 170 332 1.6E-33 T 11-11-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 7.7E-13 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 287 296 7.7E-13 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 7.7E-13 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 161 2.0E-35 T 11-11-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ATY42_RS13240 e493399d6e1cc3f9117e1eda6faaa5b8 341 Gene3D G3DSA:3.40.50.1370 4 158 8.7E-51 T 11-11-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ATY42_RS14160 db55198561e1532a6010cd7c057e8e09 121 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14160 db55198561e1532a6010cd7c057e8e09 121 Gene3D G3DSA:3.40.50.2300 2 120 4.2E-37 T 11-11-2016 ATY42_RS14160 db55198561e1532a6010cd7c057e8e09 121 SMART SM00448 3 116 1.2E-36 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14160 db55198561e1532a6010cd7c057e8e09 121 SUPERFAMILY SSF52172 3 121 3.13E-36 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS06810 dcc53ff5ee64ac07af7cd8ffab6a653e 159 Pfam PF05598 Transposase domain (DUF772) 75 148 5.8E-13 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17695 e513d3dbb3bde095463d77735c333d66 86 Pfam PF05488 PAAR motif 8 78 2.6E-25 T 11-11-2016 IPR008727 PAAR motif ATY42_RS14380 2629ec8b262c26c122170c2b9ee47865 579 SUPERFAMILY SSF64182 48 455 1.44E-103 T 11-11-2016 ATY42_RS14380 2629ec8b262c26c122170c2b9ee47865 579 Pfam PF02272 DHHA1 domain 381 451 3.8E-10 T 11-11-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ATY42_RS14380 2629ec8b262c26c122170c2b9ee47865 579 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 25 570 2.3E-134 T 11-11-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 ATY42_RS14380 2629ec8b262c26c122170c2b9ee47865 579 Pfam PF01368 DHH family 74 204 7.2E-11 T 11-11-2016 IPR001667 DDH domain ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Pfam PF08335 GlnD PII-uridylyltransferase 296 434 6.4E-41 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Pfam PF08335 GlnD PII-uridylyltransferase 810 892 1.4E-6 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 SUPERFAMILY SSF81593 800 895 1.02E-20 T 11-11-2016 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 41 275 5.9E-59 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 546 789 1.7E-66 T 11-11-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 SUPERFAMILY SSF81593 286 435 3.45E-41 T 11-11-2016 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Gene3D G3DSA:3.30.460.10 631 796 1.3E-52 T 11-11-2016 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Gene3D G3DSA:3.30.460.10 113 284 2.7E-53 T 11-11-2016 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 37 936 18.127 T 11-11-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 SUPERFAMILY SSF81301 33 285 3.16E-65 T 11-11-2016 ATY42_RS21450 62992ccaa527f4af18cef29dbc0cc61e 941 SUPERFAMILY SSF81301 519 794 1.24E-68 T 11-11-2016 ATY42_RS13270 499b739c99a9a21dfa14fc8f1555dbaf 166 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 43 165 28.523 T 11-11-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ATY42_RS13270 499b739c99a9a21dfa14fc8f1555dbaf 166 SUPERFAMILY SSF109635 33 125 1.19E-29 T 11-11-2016 ATY42_RS13270 499b739c99a9a21dfa14fc8f1555dbaf 166 SUPERFAMILY SSF57716 126 164 1.15E-6 T 11-11-2016 ATY42_RS13270 499b739c99a9a21dfa14fc8f1555dbaf 166 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 124 156 4.7E-8 T 11-11-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ATY42_RS13270 499b739c99a9a21dfa14fc8f1555dbaf 166 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 47 156 2.3E-43 T 11-11-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 ATY42_RS21300 755d819f7279d54c62da18067cc7b730 235 SUPERFAMILY SSF46689 16 134 2.51E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS21300 755d819f7279d54c62da18067cc7b730 235 Pfam PF13551 Winged helix-turn helix 23 82 3.4E-14 T 11-11-2016 ATY42_RS21300 755d819f7279d54c62da18067cc7b730 235 Pfam PF13358 DDE superfamily endonuclease 176 233 1.9E-8 T 11-11-2016 ATY42_RS21300 755d819f7279d54c62da18067cc7b730 235 Pfam PF13592 Winged helix-turn helix 101 158 5.7E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS17430 fe505d100152f66deac348d15cb4567f 221 Gene3D G3DSA:3.55.50.10 82 147 4.4E-14 T 11-11-2016 ATY42_RS17430 fe505d100152f66deac348d15cb4567f 221 Pfam PF05954 Phage late control gene D protein (GPD) 13 147 1.4E-36 T 11-11-2016 ATY42_RS17430 fe505d100152f66deac348d15cb4567f 221 SUPERFAMILY SSF69279 3 147 3.17E-34 T 11-11-2016 ATY42_RS09820 7ff714e45d7814362f10c0ddf82ad8ce 143 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 2.8E-26 T 11-11-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain ATY42_RS09820 7ff714e45d7814362f10c0ddf82ad8ce 143 Gene3D G3DSA:3.30.530.20 1 139 7.7E-34 T 11-11-2016 IPR023393 START-like domain ATY42_RS09820 7ff714e45d7814362f10c0ddf82ad8ce 143 SUPERFAMILY SSF55961 1 140 1.3E-31 T 11-11-2016 ATY42_RS08360 8604ee354133cd5620ce74ec5d4844c3 90 Gene3D G3DSA:3.40.367.20 7 89 5.3E-15 T 11-11-2016 ATY42_RS08360 8604ee354133cd5620ce74ec5d4844c3 90 Pfam PF02685 Glucokinase 7 89 1.1E-15 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS08360 8604ee354133cd5620ce74ec5d4844c3 90 SUPERFAMILY SSF53067 11 89 6.8E-5 T 11-11-2016 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 Pfam PF12833 Helix-turn-helix domain 153 230 6.7E-24 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 SUPERFAMILY SSF46689 130 180 4.78E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 SUPERFAMILY SSF55785 10 119 2.79E-10 T 11-11-2016 IPR000014 PAS domain ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 Gene3D G3DSA:3.30.450.20 10 119 3.3E-10 T 11-11-2016 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 Gene3D G3DSA:1.10.10.60 128 184 6.8E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 Pfam PF08448 PAS fold 14 122 1.3E-19 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 184 225 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 SMART SM00342 147 229 2.7E-26 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 229 2.0E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 198 213 2.0E-6 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 SUPERFAMILY SSF46689 184 230 3.09E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 Gene3D G3DSA:1.10.10.60 185 230 4.3E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15765 75ed2ed49d52d1911d6ed32b3b1e7a59 235 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 132 176 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATY42_RS11105 8d9c559bde03b90b77f20fc2122d1aa3 99 Pfam PF02303 Helix-destabilising protein 4 78 3.7E-6 T 11-11-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 ATY42_RS11105 8d9c559bde03b90b77f20fc2122d1aa3 99 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 83 5.0E-4 T 11-11-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 ATY42_RS11105 8d9c559bde03b90b77f20fc2122d1aa3 99 Gene3D G3DSA:2.40.50.140 1 87 1.5E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS11105 8d9c559bde03b90b77f20fc2122d1aa3 99 SUPERFAMILY SSF50249 1 84 9.08E-16 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS04685 d59d273db21b88dfc8ebbc0bfdec4570 460 Pfam PF01474 Class-II DAHP synthetase family 17 451 2.0E-187 T 11-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ATY42_RS04685 d59d273db21b88dfc8ebbc0bfdec4570 460 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 17 458 1.2E-223 T 11-11-2016 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ATY42_RS04685 d59d273db21b88dfc8ebbc0bfdec4570 460 SUPERFAMILY SSF51569 14 454 5.05E-181 T 11-11-2016 ATY42_RS12155 7af28973ffeacc2b058c5bdf46512d9b 232 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 19 135 3.9E-27 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ATY42_RS12155 7af28973ffeacc2b058c5bdf46512d9b 232 Gene3D G3DSA:3.10.50.40 119 232 8.5E-19 T 11-11-2016 ATY42_RS12155 7af28973ffeacc2b058c5bdf46512d9b 232 SUPERFAMILY SSF54534 27 232 2.51E-33 T 11-11-2016 ATY42_RS12155 7af28973ffeacc2b058c5bdf46512d9b 232 Gene3D G3DSA:1.10.287.460 11 118 1.8E-26 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ATY42_RS12155 7af28973ffeacc2b058c5bdf46512d9b 232 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 181 229 3.5E-7 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ATY42_RS15275 d8e1ed9980e353ff3b647b734be18898 152 Gene3D G3DSA:3.40.140.10 79 141 8.0E-5 T 11-11-2016 ATY42_RS15275 d8e1ed9980e353ff3b647b734be18898 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 74 123 2.7E-6 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ATY42_RS15275 d8e1ed9980e353ff3b647b734be18898 152 SUPERFAMILY SSF53927 79 136 3.85E-6 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS15275 d8e1ed9980e353ff3b647b734be18898 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 84 120 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 SUPERFAMILY SSF51735 164 451 5.26E-84 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 Gene3D G3DSA:3.40.50.720 162 447 3.2E-86 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 SMART SM00919 164 399 6.9E-129 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 Pfam PF01515 Phosphate acetyl/butaryl transferase 428 748 1.3E-90 T 11-11-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 1.2E-25 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 Gene3D G3DSA:3.40.50.10750 566 724 1.8E-49 T 11-11-2016 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 SMART SM01274 19 152 1.4E-73 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 SUPERFAMILY SSF53659 428 751 6.58E-86 T 11-11-2016 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 Gene3D G3DSA:3.40.50.10380 9 161 3.0E-50 T 11-11-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 Pfam PF03949 Malic enzyme, NAD binding domain 166 360 1.7E-20 T 11-11-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 PIRSF PIRSF036684 1 756 0.0 T 11-11-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 ATY42_RS05420 652f792a94c39e4ea89d69bf44911e67 769 SUPERFAMILY SSF53223 11 162 1.29E-50 T 11-11-2016 ATY42_RS10680 b9c5b973f1b9f5f911d6f971b3f2adf3 229 Pfam PF05598 Transposase domain (DUF772) 59 132 1.6E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS02335 92f22a76445a594dcb8e19106b39ad33 225 Pfam PF04002 RadC-like JAB domain 104 222 8.0E-42 T 11-11-2016 IPR025657 RadC-like JAB domain ATY42_RS02335 92f22a76445a594dcb8e19106b39ad33 225 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 5.5E-66 T 11-11-2016 IPR001405 RadC protein ATY42_RS02335 92f22a76445a594dcb8e19106b39ad33 225 Gene3D G3DSA:3.40.140.10 101 224 1.7E-46 T 11-11-2016 ATY42_RS02335 92f22a76445a594dcb8e19106b39ad33 225 SUPERFAMILY SSF47781 16 90 3.56E-6 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS02335 92f22a76445a594dcb8e19106b39ad33 225 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-11-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site ATY42_RS03705 2ee6ca376213781bbcbeed922c9a70d2 117 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 3 116 2.8E-35 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 ATY42_RS03705 2ee6ca376213781bbcbeed922c9a70d2 117 Gene3D G3DSA:3.30.479.10 1 116 8.7E-40 T 11-11-2016 ATY42_RS03705 2ee6ca376213781bbcbeed922c9a70d2 117 PIRSF PIRSF006113 1 117 1.8E-48 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 ATY42_RS03705 2ee6ca376213781bbcbeed922c9a70d2 117 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 3 94 1.0E-32 T 11-11-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 ATY42_RS03705 2ee6ca376213781bbcbeed922c9a70d2 117 SUPERFAMILY SSF55620 3 117 1.61E-39 T 11-11-2016 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 9 354 1.5E-136 T 11-11-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 SUPERFAMILY SSF160544 245 352 9.42E-40 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 1.2E-37 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 1.2E-37 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 1.2E-37 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 1.2E-37 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 1.2E-37 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 Gene3D G3DSA:3.40.1690.10 219 355 4.9E-60 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal ATY42_RS12975 e2fbb7d4e02b33308c3a85323bf1ad86 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 1.4E-121 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS12955 400c3afc6ee97c04ea6bf278996fbd83 263 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 20 261 1.5E-58 T 11-11-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 ATY42_RS12955 400c3afc6ee97c04ea6bf278996fbd83 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 209 228 1.6E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS12955 400c3afc6ee97c04ea6bf278996fbd83 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 187 209 1.6E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS12955 400c3afc6ee97c04ea6bf278996fbd83 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 86 105 1.6E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS12955 400c3afc6ee97c04ea6bf278996fbd83 263 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 27 48 1.6E-21 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS12955 400c3afc6ee97c04ea6bf278996fbd83 263 Pfam PF01311 Bacterial export proteins, family 1 20 253 5.1E-58 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS16585 a90721ab519332dd3d3b0f77b016dc30 193 Pfam PF04751 Protein of unknown function (DUF615) 14 167 1.1E-49 T 11-11-2016 IPR006839 Ribosome-associated, YjgA ATY42_RS16585 a90721ab519332dd3d3b0f77b016dc30 193 Gene3D G3DSA:1.10.60.30 25 96 1.4E-25 T 11-11-2016 IPR023153 PSPTO4464-like domain ATY42_RS16585 a90721ab519332dd3d3b0f77b016dc30 193 PIRSF PIRSF016183 1 175 1.5E-68 T 11-11-2016 IPR006839 Ribosome-associated, YjgA ATY42_RS16585 a90721ab519332dd3d3b0f77b016dc30 193 Gene3D G3DSA:1.10.60.30 103 174 2.1E-32 T 11-11-2016 IPR023153 PSPTO4464-like domain ATY42_RS16585 a90721ab519332dd3d3b0f77b016dc30 193 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 3 171 23.605 T 11-11-2016 IPR006839 Ribosome-associated, YjgA ATY42_RS16585 a90721ab519332dd3d3b0f77b016dc30 193 SUPERFAMILY SSF158710 26 170 2.35E-46 T 11-11-2016 ATY42_RS09370 aadcf976874fc969cd5e8aedaf76c0d6 198 Gene3D G3DSA:3.40.50.1000 77 188 3.2E-19 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS09370 aadcf976874fc969cd5e8aedaf76c0d6 198 SUPERFAMILY SSF56784 2 188 2.16E-20 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS09370 aadcf976874fc969cd5e8aedaf76c0d6 198 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 187 3.5E-20 T 11-11-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 ATY42_RS09370 aadcf976874fc969cd5e8aedaf76c0d6 198 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 184 9.1E-27 T 11-11-2016 ATY42_RS01760 522ca139e62654851b6d9929970de222 248 SMART SM00382 30 212 2.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS01760 522ca139e62654851b6d9929970de222 248 SUPERFAMILY SSF52540 10 226 2.05E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01760 522ca139e62654851b6d9929970de222 248 Gene3D G3DSA:3.40.50.300 1 228 6.7E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01760 522ca139e62654851b6d9929970de222 248 Pfam PF00005 ABC transporter 22 165 1.5E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 SMART SM00861 322 486 3.5E-58 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 5.0E-255 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 ProSitePatterns PS00801 Transketolase signature 1. 35 54 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 SUPERFAMILY SSF52518 320 507 4.71E-55 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Gene3D G3DSA:3.40.50.970 337 498 1.2E-34 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 SUPERFAMILY SSF52518 7 202 5.73E-72 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 SUPERFAMILY SSF52518 246 384 5.73E-72 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Gene3D G3DSA:3.40.50.920 499 620 4.8E-29 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 SUPERFAMILY SSF52922 494 620 7.2E-27 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Pfam PF02779 Transketolase, pyrimidine binding domain 321 481 8.6E-36 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Pfam PF02780 Transketolase, C-terminal domain 498 614 3.3E-23 T 11-11-2016 IPR033248 Transketolase, C-terminal domain ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Gene3D G3DSA:3.40.50.970 245 336 5.5E-70 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Gene3D G3DSA:3.40.50.970 25 202 5.5E-70 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 9 623 44.901 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS09785 a9ba3ade5f7877c937abdba6d09dceea 638 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 10 285 2.3E-114 T 11-11-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 Gene3D G3DSA:1.10.10.10 8 79 1.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 Pfam PF09339 IclR helix-turn-helix domain 12 62 8.9E-13 T 11-11-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 SUPERFAMILY SSF46785 12 79 4.1E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 Pfam PF01614 Bacterial transcriptional regulator 131 245 2.4E-9 T 11-11-2016 IPR014757 Transcription regulator IclR, C-terminal ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 Gene3D G3DSA:3.30.450.40 85 253 1.6E-31 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 SUPERFAMILY SSF55781 74 250 3.86E-32 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS01540 1f06fcb05d80cfcca7647559e928672a 258 SMART SM00346 10 99 1.4E-14 T 11-11-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Gene3D G3DSA:3.40.50.300 2 193 4.3E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 SUPERFAMILY SSF54980 399 493 2.88E-23 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Pfam PF00679 Elongation factor G C-terminus 399 479 1.8E-18 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 SUPERFAMILY SSF54980 292 370 1.08E-18 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Gene3D G3DSA:3.30.70.240 401 489 2.1E-19 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Gene3D G3DSA:3.30.70.870 292 369 6.2E-26 T 11-11-2016 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 TIGRFAM TIGR01393 lepA: elongation factor 4 3 595 1.1E-290 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Pfam PF03144 Elongation factor Tu domain 2 205 275 7.6E-10 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.0E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.0E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.0E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.0E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.0E-14 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 SMART SM00838 398 486 0.0029 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Hamap MF_00071 Elongation factor 4 [lepA]. 1 596 296.56 T 11-11-2016 IPR006297 Elongation factor 4 GO:0005525 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Pfam PF00009 Elongation factor Tu GTP binding domain 3 181 3.4E-51 T 11-11-2016 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 SUPERFAMILY SSF52540 2 221 2.22E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Gene3D G3DSA:2.40.30.10 194 290 8.8E-23 T 11-11-2016 ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 Pfam PF06421 GTP-binding protein LepA C-terminus 487 593 4.8E-51 T 11-11-2016 IPR013842 GTP-binding protein LepA, C-terminal ATY42_RS08975 f346e6692fa2bd7c5aff29af0dc836a8 596 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 5.7E-17 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS23080 8ce5f2b9521609fb5a769d7ea27eaf8c 116 Pfam PF13670 Peptidase propeptide and YPEB domain 9 85 2.0E-10 T 11-11-2016 IPR025711 PepSY domain ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 Gene3D G3DSA:3.30.1490.20 157 222 6.5E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 1.6E-111 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 PIRSF PIRSF039102 1 359 8.4E-128 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 Gene3D G3DSA:3.30.470.20 224 359 5.5E-52 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 SUPERFAMILY SSF56059 140 355 7.95E-61 T 11-11-2016 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 Gene3D G3DSA:3.40.50.20 1 129 9.3E-37 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 11-11-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.7E-31 T 11-11-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 41.455 T 11-11-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 Pfam PF07478 D-ala D-ala ligase C-terminus 148 348 4.6E-75 T 11-11-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01625 96b35d932bf617f156dbc91c0c7ed8b4 366 SUPERFAMILY SSF52440 3 139 3.93E-37 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Pfam PF00140 Sigma-70 factor, region 1.2 104 135 4.4E-13 T 11-11-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Gene3D G3DSA:1.10.601.10 118 458 8.9E-123 T 11-11-2016 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 582 608 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Pfam PF03979 Sigma-70 factor, region 1.1 8 87 9.9E-29 T 11-11-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 385 610 1.5E-39 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Pfam PF04546 Sigma-70, non-essential region 145 353 1.3E-49 T 11-11-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 413 426 - T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 PRINTS PR00046 Major sigma-70 factor signature 437 445 3.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 PRINTS PR00046 Major sigma-70 factor signature 597 608 3.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 PRINTS PR00046 Major sigma-70 factor signature 561 573 3.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 PRINTS PR00046 Major sigma-70 factor signature 413 426 3.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 PRINTS PR00046 Major sigma-70 factor signature 582 597 3.3E-31 T 11-11-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 SUPERFAMILY SSF88946 121 456 4.87E-100 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 622 45.547 T 11-11-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Gene3D G3DSA:1.10.10.10 462 513 7.6E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Pfam PF04539 Sigma-70 region 3 468 544 1.1E-30 T 11-11-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Pfam PF04542 Sigma-70 region 2 389 458 1.7E-21 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Pfam PF04545 Sigma-70, region 4 557 610 1.5E-19 T 11-11-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 Gene3D G3DSA:1.10.10.10 552 622 1.8E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 SUPERFAMILY SSF88659 519 621 1.77E-27 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 SUPERFAMILY SSF88659 462 535 2.94E-21 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02870 d9fccddbc6f191d48682d772c1b10692 624 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 385 621 1.0E-121 T 11-11-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02125 5bb251fec95c686e7da8d22277a9835f 401 Gene3D G3DSA:3.40.640.10 60 276 6.0E-73 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS02125 5bb251fec95c686e7da8d22277a9835f 401 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 6 389 44.492 T 11-11-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 ATY42_RS02125 5bb251fec95c686e7da8d22277a9835f 401 Pfam PF00155 Aminotransferase class I and II 45 385 2.8E-50 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS02125 5bb251fec95c686e7da8d22277a9835f 401 Gene3D G3DSA:3.90.1150.10 277 389 1.4E-35 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS02125 5bb251fec95c686e7da8d22277a9835f 401 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 385 7.2E-144 T 11-11-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 ATY42_RS02125 5bb251fec95c686e7da8d22277a9835f 401 SUPERFAMILY SSF53383 15 389 1.51E-94 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 Gene3D G3DSA:3.40.50.80 708 844 5.6E-35 T 11-11-2016 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 Pfam PF00175 Oxidoreductase NAD-binding domain 713 817 3.8E-9 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 Pfam PF00258 Flavodoxin 387 510 2.0E-24 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 Pfam PF03929 PepSY-associated TM region 7 359 5.2E-56 T 11-11-2016 IPR005625 PepSY-associated TM protein ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 SUPERFAMILY SSF52218 383 526 1.82E-38 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 Gene3D G3DSA:2.40.30.10 647 695 8.2E-5 T 11-11-2016 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 SUPERFAMILY SSF63380 536 704 2.72E-17 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 Gene3D G3DSA:3.40.50.360 379 524 5.0E-39 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 SUPERFAMILY SSF52343 707 844 4.71E-33 T 11-11-2016 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00369 Flavodoxin signature 434 445 3.4E-9 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00369 Flavodoxin signature 489 508 3.4E-9 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00369 Flavodoxin signature 386 399 3.4E-9 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00369 Flavodoxin signature 465 475 3.4E-9 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 803 811 2.1E-7 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 780 796 2.1E-7 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 749 760 2.1E-7 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 712 731 2.1E-7 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01850 192198fac69311d06e4c09bcd89a50c4 844 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 649 656 2.1E-7 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS08185 0008984c627e78c403be504e3aa5b656 225 SUPERFAMILY SSF53474 27 223 1.99E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08185 0008984c627e78c403be504e3aa5b656 225 Pfam PF12697 Alpha/beta hydrolase family 27 189 7.0E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS08185 0008984c627e78c403be504e3aa5b656 225 Gene3D G3DSA:3.40.50.1820 27 126 1.1E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08185 0008984c627e78c403be504e3aa5b656 225 Gene3D G3DSA:3.40.50.1820 161 219 1.1E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.6E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 SMART SM00448 11 121 2.5E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 SUPERFAMILY SSF52172 9 190 1.34E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 SMART SM00862 157 233 4.6E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 Gene3D G3DSA:1.10.10.10 135 233 5.3E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 Pfam PF00072 Response regulator receiver domain 13 122 8.8E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19340 5946b2ed3a3705270d22f3f72e297486 238 Gene3D G3DSA:3.40.50.2300 10 129 1.2E-37 T 11-11-2016 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 155 253 3.4E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 SUPERFAMILY SSF47384 149 189 8.24E-6 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 SMART SM00387 297 406 3.6E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 SUPERFAMILY SSF55874 252 404 3.8E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 404 5.7E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 1.1E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 366 384 1.1E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 403 1.1E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 1.1E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 Gene3D G3DSA:1.10.287.130 223 243 6.5E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 Gene3D G3DSA:1.10.287.130 149 180 6.5E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS12715 f20d73e79925666f11106d3c10f9f0f0 408 Gene3D G3DSA:3.30.565.10 244 406 3.3E-40 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 SUPERFAMILY SSF53901 7 278 1.51E-75 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 Gene3D G3DSA:3.40.47.10 149 189 1.4E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 Gene3D G3DSA:3.40.47.10 285 400 1.4E-64 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 Gene3D G3DSA:3.40.47.10 7 130 2.8E-67 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 Gene3D G3DSA:3.40.47.10 190 284 2.8E-67 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 Pfam PF00108 Thiolase, N-terminal domain 9 271 1.9E-74 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 Pfam PF02803 Thiolase, C-terminal domain 278 399 4.4E-44 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-11-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 399 4.2E-140 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 11-11-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 PIRSF PIRSF000429 2 401 1.3E-126 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS12580 b63e97c7415b58802df208c58f308c51 401 SUPERFAMILY SSF53901 279 399 8.0E-42 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS07425 f29a31d61150e247996c830e04acf3a3 142 SUPERFAMILY SSF47175 31 142 2.65E-16 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ATY42_RS07425 f29a31d61150e247996c830e04acf3a3 142 Pfam PF01322 Cytochrome C' 86 142 5.0E-5 T 11-11-2016 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 ATY42_RS07425 f29a31d61150e247996c830e04acf3a3 142 Gene3D G3DSA:1.20.120.10 87 142 9.7E-6 T 11-11-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 ATY42_RS06970 1463b6587b664ba872e3d8527d704ea9 224 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 40 212 3.3E-31 T 11-11-2016 IPR003740 Uncharacterised membrane protein YitT ATY42_RS10295 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11010 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS18655 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS16815 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS03975 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20650 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22125 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05590 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07295 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10125 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15220 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00810 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS18715 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS14250 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05920 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05670 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00270 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS14840 dad2031e30b42941a1ce23149510e982 158 Pfam PF01609 Transposase DDE domain 1 155 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 173 2.1E-17 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 ProSitePatterns PS01155 Endonuclease III family signature. 109 138 - T 11-11-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 SMART SM00478 46 200 1.5E-40 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 11-11-2016 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 Pfam PF14815 NUDIX domain 244 356 6.0E-22 T 11-11-2016 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 Gene3D G3DSA:1.10.340.30 28 129 1.2E-42 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 13 286 2.8E-100 T 11-11-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 SUPERFAMILY SSF48150 11 234 1.1E-71 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 SUPERFAMILY SSF55811 230 357 8.26E-27 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 Gene3D G3DSA:1.10.1670.10 130 233 4.2E-34 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 Pfam PF00633 Helix-hairpin-helix motif 107 134 2.1E-7 T 11-11-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ATY42_RS15785 e23e14b83341b5329da3c683fc8d5106 357 Gene3D G3DSA:3.90.79.10 240 357 9.1E-24 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS17000 ad2150e21dccd183000208f946b4c51d 356 Gene3D G3DSA:2.40.50.100 156 187 8.5E-13 T 11-11-2016 ATY42_RS17000 ad2150e21dccd183000208f946b4c51d 356 Gene3D G3DSA:2.40.50.100 62 95 8.5E-13 T 11-11-2016 ATY42_RS17000 ad2150e21dccd183000208f946b4c51d 356 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 55 261 2.8E-32 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS17000 ad2150e21dccd183000208f946b4c51d 356 SUPERFAMILY SSF111369 52 267 4.45E-42 T 11-11-2016 ATY42_RS17000 ad2150e21dccd183000208f946b4c51d 356 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 341 6.1E-78 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 SMART SM00345 33 92 3.5E-17 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 Pfam PF07702 UTRA domain 114 247 3.7E-32 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 Gene3D G3DSA:3.40.1410.10 89 254 5.1E-39 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 92 1.4E-17 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 SUPERFAMILY SSF64288 81 255 5.97E-41 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 66 82 4.2E-7 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 66 4.2E-7 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 SMART SM00866 112 248 3.5E-27 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 SUPERFAMILY SSF46785 22 94 9.89E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS19740 15c1c4a4040c44eb59daab2e7093dcf6 255 Gene3D G3DSA:1.10.10.10 23 88 2.6E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09595 6bcdd8076e1c1a74bd627ad1611fe54b 125 SUPERFAMILY SSF109604 59 109 6.91E-7 T 11-11-2016 ATY42_RS09595 6bcdd8076e1c1a74bd627ad1611fe54b 125 Gene3D G3DSA:1.10.3150.10 57 109 3.7E-11 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD ATY42_RS09595 6bcdd8076e1c1a74bd627ad1611fe54b 125 Pfam PF08668 HDOD domain 70 109 1.5E-7 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD ATY42_RS13390 87da50a487a3ec236492be0382f1cee5 342 SUPERFAMILY SSF102114 114 332 1.44E-18 T 11-11-2016 ATY42_RS13390 87da50a487a3ec236492be0382f1cee5 342 PIRSF PIRSF004911 7 342 1.8E-103 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ATY42_RS13390 87da50a487a3ec236492be0382f1cee5 342 Gene3D G3DSA:3.20.20.70 117 321 1.8E-9 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS13390 87da50a487a3ec236492be0382f1cee5 342 Pfam PF13394 4Fe-4S single cluster domain 122 190 1.3E-4 T 11-11-2016 ATY42_RS13390 87da50a487a3ec236492be0382f1cee5 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 22 341 7.9E-135 T 11-11-2016 IPR022462 Lysine-2,3-aminomutase-like ATY42_RS13390 87da50a487a3ec236492be0382f1cee5 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 21 335 5.2E-87 T 11-11-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 292 7.7E-59 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 SUPERFAMILY SSF51735 105 293 3.88E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 16 319 9.8E-22 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 Gene3D G3DSA:3.40.50.720 8 118 5.2E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 Gene3D G3DSA:3.40.50.720 119 294 4.8E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 SUPERFAMILY SSF52283 7 140 1.89E-31 T 11-11-2016 ATY42_RS16385 08cb5137af2a4f84ee4775a9b0d635ce 357 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 153 181 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ATY42_RS08500 5f6e391ad1967411b54ccf024be057b7 360 Pfam PF13358 DDE superfamily endonuclease 172 318 1.7E-22 T 11-11-2016 ATY42_RS08500 5f6e391ad1967411b54ccf024be057b7 360 Gene3D G3DSA:3.30.420.10 202 333 1.2E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08500 5f6e391ad1967411b54ccf024be057b7 360 Pfam PF13518 Helix-turn-helix domain 35 86 1.3E-13 T 11-11-2016 ATY42_RS08500 5f6e391ad1967411b54ccf024be057b7 360 SUPERFAMILY SSF46689 35 132 1.58E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08500 5f6e391ad1967411b54ccf024be057b7 360 Gene3D G3DSA:1.10.10.700 25 70 3.7E-4 T 11-11-2016 ATY42_RS08500 5f6e391ad1967411b54ccf024be057b7 360 SUPERFAMILY SSF53098 204 334 8.72E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 29 167 3.5E-15 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 SUPERFAMILY SSF52172 445 569 2.28E-28 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 Pfam PF00990 Diguanylate cyclase, GGDEF domain 27 163 6.0E-19 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 SMART SM00448 446 558 6.5E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 Pfam PF00563 EAL domain 184 419 4.6E-71 T 11-11-2016 IPR001633 EAL domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 SUPERFAMILY SSF55073 27 169 1.26E-23 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 Pfam PF00072 Response regulator receiver domain 449 559 1.0E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 SMART SM00267 11 168 2.9E-7 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 Gene3D G3DSA:3.30.70.270 25 172 2.7E-26 T 11-11-2016 ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 SUPERFAMILY SSF141868 185 432 5.75E-81 T 11-11-2016 IPR001633 EAL domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 Gene3D G3DSA:3.20.20.450 183 429 1.8E-84 T 11-11-2016 IPR001633 EAL domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 SMART SM00052 178 424 2.5E-97 T 11-11-2016 IPR001633 EAL domain ATY42_RS12710 29a31c10ffdb39bcf45794c39c65e4b4 573 Gene3D G3DSA:3.40.50.2300 445 569 3.4E-27 T 11-11-2016 ATY42_RS05115 6ce5eef543ae56c7b848ea68ece1012b 165 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 8 165 31.354 T 11-11-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type Reactome: R-HSA-947581 ATY42_RS05115 6ce5eef543ae56c7b848ea68ece1012b 165 SUPERFAMILY SSF55040 18 160 4.58E-48 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 ATY42_RS05115 6ce5eef543ae56c7b848ea68ece1012b 165 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 10 159 5.5E-51 T 11-11-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 ATY42_RS05115 6ce5eef543ae56c7b848ea68ece1012b 165 Gene3D G3DSA:3.30.70.640 9 160 6.1E-57 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 ATY42_RS05115 6ce5eef543ae56c7b848ea68ece1012b 165 Pfam PF01967 MoaC family 21 157 7.5E-48 T 11-11-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 ATY42_RS13400 ae8745f8158c9eb5093b6744a7efd3ea 309 Gene3D G3DSA:3.40.190.10 125 168 2.2E-7 T 11-11-2016 ATY42_RS13400 ae8745f8158c9eb5093b6744a7efd3ea 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 41 288 6.0E-45 T 11-11-2016 ATY42_RS13400 ae8745f8158c9eb5093b6744a7efd3ea 309 SUPERFAMILY SSF53850 34 286 3.3E-19 T 11-11-2016 ATY42_RS13465 f5617b986fa3950a8eda04acbe96bc0b 232 SUPERFAMILY SSF52833 1 81 3.61E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS13465 f5617b986fa3950a8eda04acbe96bc0b 232 Gene3D G3DSA:3.40.30.10 2 94 3.6E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS13465 f5617b986fa3950a8eda04acbe96bc0b 232 Pfam PF00043 Glutathione S-transferase, C-terminal domain 150 211 3.4E-9 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal ATY42_RS13465 f5617b986fa3950a8eda04acbe96bc0b 232 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 4.7E-15 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS13465 f5617b986fa3950a8eda04acbe96bc0b 232 Gene3D G3DSA:1.20.1050.10 95 216 1.4E-25 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS13465 f5617b986fa3950a8eda04acbe96bc0b 232 SUPERFAMILY SSF47616 85 222 4.46E-26 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS23025 6a3d43153efbc650d8a04cb029e92873 375 Pfam PF04055 Radical SAM superfamily 89 267 1.1E-13 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS23025 6a3d43153efbc650d8a04cb029e92873 375 SMART SM00729 85 310 5.6E-4 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS23025 6a3d43153efbc650d8a04cb029e92873 375 SUPERFAMILY SSF102114 74 295 8.89E-10 T 11-11-2016 ATY42_RS23025 6a3d43153efbc650d8a04cb029e92873 375 Gene3D G3DSA:3.20.20.70 173 275 3.5E-8 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS14545 a736cb9d36d2b0a98dd3158c49151e5d 210 SUPERFAMILY SSF51569 7 207 3.11E-52 T 11-11-2016 ATY42_RS14545 a736cb9d36d2b0a98dd3158c49151e5d 210 Gene3D G3DSA:3.20.20.70 12 208 8.9E-62 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS14545 a736cb9d36d2b0a98dd3158c49151e5d 210 Pfam PF01081 KDPG and KHG aldolase 13 192 1.1E-23 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ATY42_RS14545 a736cb9d36d2b0a98dd3158c49151e5d 210 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 126 139 - T 11-11-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ATY42_RS08540 1d0f73419d4a949584442045d5d9298c 367 SUPERFAMILY SSF50939 36 354 7.52E-64 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATY42_RS08540 1d0f73419d4a949584442045d5d9298c 367 Gene3D G3DSA:2.120.10.10 39 357 3.3E-70 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATY42_RS08540 1d0f73419d4a949584442045d5d9298c 367 Pfam PF13088 BNR repeat-like domain 61 337 4.1E-91 T 11-11-2016 IPR011040 Sialidases Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 SUPERFAMILY SSF52467 184 352 9.0E-43 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 SUPERFAMILY SSF52518 359 564 1.09E-58 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 Gene3D G3DSA:3.40.50.970 354 558 1.4E-57 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 529 2.6E-38 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 172 1.6E-41 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 321 5.8E-29 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 Gene3D G3DSA:3.40.50.1220 188 344 4.0E-41 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 SUPERFAMILY SSF52518 4 180 2.63E-42 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS21150 7cefbcf9c30119a59934ae6544ac31da 575 Gene3D G3DSA:3.40.50.970 3 182 3.3E-50 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS18240 2b5c81e37e552ce75ab2185701a0a4da 406 Gene3D G3DSA:3.20.20.80 41 307 1.8E-60 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS18240 2b5c81e37e552ce75ab2185701a0a4da 406 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 103 162 2.5E-6 T 11-11-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 ATY42_RS18240 2b5c81e37e552ce75ab2185701a0a4da 406 Gene3D G3DSA:2.60.40.1180 308 405 1.7E-30 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS18240 2b5c81e37e552ce75ab2185701a0a4da 406 SUPERFAMILY SSF51445 40 314 1.15E-52 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS18240 2b5c81e37e552ce75ab2185701a0a4da 406 SUPERFAMILY SSF51011 311 405 5.58E-25 T 11-11-2016 ATY42_RS18240 2b5c81e37e552ce75ab2185701a0a4da 406 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 315 403 7.4E-12 T 11-11-2016 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 Hamap MF_00323 Ferrochelatase [hemH]. 8 321 33.746 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 TIGRFAM TIGR00109 hemH: ferrochelatase 8 317 7.7E-87 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 SUPERFAMILY SSF53800 8 320 1.7E-93 T 11-11-2016 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 Pfam PF00762 Ferrochelatase 10 320 4.2E-100 T 11-11-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 Gene3D G3DSA:3.40.50.1400 8 203 2.6E-63 T 11-11-2016 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 ProSitePatterns PS00534 Ferrochelatase signature. 192 210 - T 11-11-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ATY42_RS22160 66447444b157a826c7aea84c50615af9 321 Gene3D G3DSA:3.40.50.1400 204 319 8.1E-30 T 11-11-2016 ATY42_RS07915 60c225165ab0b270e4b9324403436359 304 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 72 142 8.4E-17 T 11-11-2016 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 ATY42_RS07915 60c225165ab0b270e4b9324403436359 304 SUPERFAMILY SSF55729 136 297 3.18E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS07915 60c225165ab0b270e4b9324403436359 304 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 57 298 40.239 T 11-11-2016 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic ATY42_RS07915 60c225165ab0b270e4b9324403436359 304 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 162 288 3.9E-33 T 11-11-2016 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 27 698 7.5E-280 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Gene3D G3DSA:3.30.1840.10 129 320 1.3E-62 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Gene3D G3DSA:3.30.870.10 519 699 3.8E-71 T 11-11-2016 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Pfam PF13089 Polyphosphate kinase N-terminal domain 27 131 2.0E-30 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Pfam PF02503 Polyphosphate kinase middle domain 141 342 1.1E-57 T 11-11-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Hamap MF_00347 Polyphosphate kinase [ppk]. 24 700 32.045 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 PIRSF PIRSF015589 7 700 2.0E-263 T 11-11-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Pfam PF13090 Polyphosphate kinase C-terminal domain 349 696 3.9E-150 T 11-11-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 SUPERFAMILY SSF56024 336 511 9.73E-57 T 11-11-2016 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 SUPERFAMILY SSF56024 519 699 2.24E-69 T 11-11-2016 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 Gene3D G3DSA:3.30.870.10 337 518 8.0E-74 T 11-11-2016 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 SUPERFAMILY SSF143724 130 335 3.53E-58 T 11-11-2016 ATY42_RS18475 aa6b388f2611bc6da49b01d9d8c78bcd 700 SUPERFAMILY SSF140356 24 126 6.54E-34 T 11-11-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 ATY42_RS02150 06021b32bfada94af7374fe10f39ee8e 273 Gene3D G3DSA:3.90.550.10 13 128 3.7E-14 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS02150 06021b32bfada94af7374fe10f39ee8e 273 Pfam PF00535 Glycosyl transferase family 2 13 134 4.2E-19 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS02150 06021b32bfada94af7374fe10f39ee8e 273 SUPERFAMILY SSF53448 10 226 4.64E-31 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 SUPERFAMILY SSF47648 4 72 8.5E-18 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 SUPERFAMILY SSF52418 77 340 1.02E-92 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 Pfam PF02885 Glycosyl transferase family, helical bundle domain 7 68 6.8E-13 T 11-11-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 Gene3D G3DSA:3.40.1030.10 77 339 1.8E-103 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 7 337 36.761 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 4.8E-123 T 11-11-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 Pfam PF00591 Glycosyl transferase family, a/b domain 77 327 1.5E-91 T 11-11-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ATY42_RS20960 c922f7b2182407e7c7b558542d451a9a 345 Gene3D G3DSA:1.20.970.10 6 71 1.8E-25 T 11-11-2016 ATY42_RS15790 78df7cce468192d675e161259cb9cb94 92 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.097 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ATY42_RS15790 78df7cce468192d675e161259cb9cb94 92 PIRSF PIRSF029827 1 90 1.4E-40 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ATY42_RS15790 78df7cce468192d675e161259cb9cb94 92 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 8.9E-40 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ATY42_RS15790 78df7cce468192d675e161259cb9cb94 92 SUPERFAMILY SSF111148 1 88 6.28E-37 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ATY42_RS15790 78df7cce468192d675e161259cb9cb94 92 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 77 1.0E-40 T 11-11-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 ATY42_RS15790 78df7cce468192d675e161259cb9cb94 92 Gene3D G3DSA:1.10.3880.10 1 88 1.5E-38 T 11-11-2016 ATY42_RS15920 52a1990666f74c95e464e3d5bed3ac7a 264 Pfam PF04230 Polysaccharide pyruvyl transferase 75 209 2.4E-14 T 11-11-2016 IPR007345 Polysaccharide pyruvyl transferase ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 SMART SM00849 11 165 1.6E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 253 2.2E-25 T 11-11-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 SUPERFAMILY SSF56281 1 253 8.39E-63 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 Gene3D G3DSA:3.60.15.10 5 253 1.9E-80 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 Pfam PF00753 Metallo-beta-lactamase superfamily 16 165 1.5E-12 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 253 1.0E-99 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 253 42.171 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ATY42_RS04990 5d6e2c579617fb9c06cb176ad8f4ddc1 255 PIRSF PIRSF005457 1 253 8.2E-91 T 11-11-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 SUPERFAMILY SSF88946 24 96 3.65E-8 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 Pfam PF04542 Sigma-70 region 2 30 89 1.0E-5 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 Gene3D G3DSA:1.10.10.10 127 189 3.6E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 SUPERFAMILY SSF88659 101 189 1.55E-16 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 186 5.4E-23 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 Gene3D G3DSA:1.10.1740.10 23 122 1.2E-7 T 11-11-2016 ATY42_RS18300 8b996574af72c66a493fbc4e76397bff 191 Pfam PF08281 Sigma-70, region 4 131 183 4.3E-17 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 SUPERFAMILY SSF46689 19 84 2.74E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 74 1.7E-15 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 Gene3D G3DSA:1.10.357.10 68 216 1.0E-37 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 160 214 1.3E-17 T 11-11-2016 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 SUPERFAMILY SSF48498 94 215 3.02E-8 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 Gene3D G3DSA:1.10.10.60 18 67 8.1E-21 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 5.8E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS04480 9782efb20c8c69fe9bc8393abb9010f6 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 5.8E-11 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 1.6E-87 T 11-11-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 SMART SM00898 2 117 3.0E-56 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 9.5E-24 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 5.0E-34 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 SMART SM01232 131 223 1.6E-45 T 11-11-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 Gene3D G3DSA:1.10.8.50 132 271 7.3E-48 T 11-11-2016 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 11-11-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 SUPERFAMILY SSF46946 132 223 1.22E-28 T 11-11-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 Gene3D G3DSA:3.20.190.10 2 131 2.1E-40 T 11-11-2016 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 43.934 T 11-11-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 Pfam PF06827 Zinc finger found in FPG and IleRS 243 270 1.6E-6 T 11-11-2016 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 SUPERFAMILY SSF81624 2 140 1.83E-42 T 11-11-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ATY42_RS01350 bad84d1dd9f5e9eb910434b6b87076c3 271 SUPERFAMILY SSF57716 219 270 2.08E-15 T 11-11-2016 ATY42_RS18925 57ed609a3ac94b82a9dd138aa763b44f 126 Gene3D G3DSA:1.10.3830.10 10 126 1.7E-41 T 11-11-2016 ATY42_RS18925 57ed609a3ac94b82a9dd138aa763b44f 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 121 1.9E-33 T 11-11-2016 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 SMART SM00448 1 112 8.8E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 SUPERFAMILY SSF46894 118 217 1.45E-26 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 Gene3D G3DSA:1.10.10.10 124 218 5.1E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 SUPERFAMILY SSF52172 1 132 7.83E-37 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 1.3E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 Gene3D G3DSA:3.40.50.2300 1 123 3.5E-36 T 11-11-2016 ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 Pfam PF00072 Response regulator receiver domain 3 112 8.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05790 98b1213ad0b79feebb95412900a0965f 232 SMART SM00862 145 216 5.9E-25 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS11930 3bfd84869ddbda3555034bd22a7ce081 141 Pfam PF13276 HTH-like domain 46 99 1.2E-10 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS23250 5eef97a111ad903ea719bbdc5eb7e51d 388 Gene3D G3DSA:2.30.130.10 12 69 2.5E-18 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS23250 5eef97a111ad903ea719bbdc5eb7e51d 388 Gene3D G3DSA:3.30.750.80 73 173 1.2E-24 T 11-11-2016 ATY42_RS23250 5eef97a111ad903ea719bbdc5eb7e51d 388 SUPERFAMILY SSF88697 12 69 6.96E-11 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS23250 5eef97a111ad903ea719bbdc5eb7e51d 388 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 169 300 1.1E-18 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ATY42_RS23250 5eef97a111ad903ea719bbdc5eb7e51d 388 Gene3D G3DSA:3.40.50.150 179 387 4.0E-57 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS23250 5eef97a111ad903ea719bbdc5eb7e51d 388 SUPERFAMILY SSF53335 78 384 4.4E-68 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19260 492e87ba2c8f899d9cdee40d01cdf197 457 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 17 381 39.365 T 11-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 ATY42_RS19260 492e87ba2c8f899d9cdee40d01cdf197 457 Pfam PF01098 Cell cycle protein 24 373 4.9E-99 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 ATY42_RS19260 492e87ba2c8f899d9cdee40d01cdf197 457 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 19 372 6.2E-126 T 11-11-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 ATY42_RS08510 d05bd63e141dee562d37a92991723346 350 Gene3D G3DSA:3.40.50.410 148 320 2.1E-20 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS08510 d05bd63e141dee562d37a92991723346 350 Pfam PF12450 von Willebrand factor 42 133 8.7E-39 T 11-11-2016 IPR022156 Uncharacterised protein YfbK, N-terminal ATY42_RS08510 d05bd63e141dee562d37a92991723346 350 Pfam PF00092 von Willebrand factor type A domain 150 310 2.6E-17 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS08510 d05bd63e141dee562d37a92991723346 350 SMART SM00327 148 324 2.2E-24 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS08510 d05bd63e141dee562d37a92991723346 350 SUPERFAMILY SSF53300 147 320 1.44E-33 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 357 465 6.2E-37 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PIRSF PIRSF000350 1 476 1.4E-73 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 Gene3D G3DSA:3.30.390.30 345 475 6.2E-48 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 Gene3D G3DSA:3.50.50.60 149 344 1.8E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 Gene3D G3DSA:3.50.50.60 3 148 4.8E-34 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 SUPERFAMILY SSF51905 1 347 4.67E-57 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 338 3.0E-63 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 353 374 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 440 460 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 433 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 289 2.6E-72 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 SUPERFAMILY SSF55424 354 475 4.47E-42 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 2.4E-35 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 2.4E-35 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.4E-35 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 274 290 2.4E-35 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.4E-35 T 11-11-2016 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ATY42_RS09910 64fa4246d033908afb116919605a72d9 478 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 475 2.7E-151 T 11-11-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ATY42_RS21410 91afb3b44528577f0405fadf9c88191c 186 SUPERFAMILY SSF101874 5 172 1.7E-53 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS21410 91afb3b44528577f0405fadf9c88191c 186 SMART SM00867 7 171 1.5E-66 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS21410 91afb3b44528577f0405fadf9c88191c 186 Gene3D G3DSA:2.40.128.110 6 176 2.2E-57 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS21410 91afb3b44528577f0405fadf9c88191c 186 Pfam PF04264 YceI-like domain 8 170 1.1E-42 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 Gene3D G3DSA:3.40.50.20 8 102 6.5E-19 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 52.881 T 11-11-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 285 1.2E-76 T 11-11-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 Gene3D G3DSA:3.30.1490.20 103 174 2.3E-5 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 SUPERFAMILY SSF56059 98 288 2.47E-45 T 11-11-2016 ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 Pfam PF08443 RimK-like ATP-grasp domain 97 285 1.9E-57 T 11-11-2016 IPR013651 ATP-grasp fold, RimK-type ATY42_RS05900 effa214f3daa9d5cd34957fdee45b03f 295 Gene3D G3DSA:3.30.470.20 175 277 2.7E-33 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS06895 1f315021e637be886eacf41f8cb3e564 155 SUPERFAMILY SSF82199 4 148 1.57E-42 T 11-11-2016 ATY42_RS06895 1f315021e637be886eacf41f8cb3e564 155 SMART SM00317 3 128 3.1E-31 T 11-11-2016 IPR001214 SET domain GO:0005515 ATY42_RS06895 1f315021e637be886eacf41f8cb3e564 155 Gene3D G3DSA:2.170.270.10 4 150 1.1E-43 T 11-11-2016 ATY42_RS06895 1f315021e637be886eacf41f8cb3e564 155 Pfam PF00856 SET domain 14 122 4.1E-20 T 11-11-2016 IPR001214 SET domain GO:0005515 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 Gene3D G3DSA:3.40.50.2300 5 101 1.6E-13 T 11-11-2016 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 121 211 1.9E-18 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 SUPERFAMILY SSF52794 5 100 2.22E-15 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 Gene3D G3DSA:3.40.50.2300 115 217 7.3E-42 T 11-11-2016 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 232 572 2.6E-150 T 11-11-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 120 203 2.2E-38 T 11-11-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 ATY42_RS13935 7bea16d26236dc0c1ef03bbc44a076ee 580 SUPERFAMILY SSF52794 118 217 9.07E-37 T 11-11-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 Gene3D G3DSA:1.25.20.10 26 381 2.7E-85 T 11-11-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 Pfam PF14718 Soluble lytic murein transglycosylase L domain 399 457 6.9E-10 T 11-11-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 SUPERFAMILY SSF48435 26 471 5.23E-101 T 11-11-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 Gene3D G3DSA:1.10.1240.20 399 455 5.8E-8 T 11-11-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 Pfam PF01464 Transglycosylase SLT domain 478 590 1.9E-23 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 SUPERFAMILY SSF53955 475 633 5.22E-44 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS03955 6b935294b4d8645c1d97ea33a99b567d 657 Gene3D G3DSA:1.10.530.10 469 625 2.5E-44 T 11-11-2016 ATY42_RS09020 022758d06cbcce95b554e687d2e20251 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS09020 022758d06cbcce95b554e687d2e20251 411 Pfam PF01610 Transposase 155 390 4.3E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS22930 022758d06cbcce95b554e687d2e20251 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS22930 022758d06cbcce95b554e687d2e20251 411 Pfam PF01610 Transposase 155 390 4.3E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS08290 022758d06cbcce95b554e687d2e20251 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS08290 022758d06cbcce95b554e687d2e20251 411 Pfam PF01610 Transposase 155 390 4.3E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS11675 4e00c0705d3039392aa24056530f0037 592 SMART SM00631 40 273 2.7E-4 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ATY42_RS11675 4e00c0705d3039392aa24056530f0037 592 Gene3D G3DSA:3.40.630.10 27 322 1.6E-35 T 11-11-2016 ATY42_RS11675 4e00c0705d3039392aa24056530f0037 592 Pfam PF00246 Zinc carboxypeptidase 45 231 2.2E-34 T 11-11-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ATY42_RS11675 4e00c0705d3039392aa24056530f0037 592 SUPERFAMILY SSF53187 38 322 2.12E-46 T 11-11-2016 ATY42_RS03305 58a4f1fd2e57627b9df037a6a4cd13d6 163 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 87 150 7.4E-10 T 11-11-2016 IPR018660 C-type lysozyme, inhibitor ATY42_RS03305 58a4f1fd2e57627b9df037a6a4cd13d6 163 SUPERFAMILY SSF141488 82 155 3.79E-14 T 11-11-2016 IPR018660 C-type lysozyme, inhibitor ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 32 56 2.7E-5 T 11-11-2016 ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 177 2.7E-5 T 11-11-2016 ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 SUPERFAMILY SSF103473 24 213 2.49E-66 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 SUPERFAMILY SSF103473 265 436 2.49E-66 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 SUPERFAMILY SSF103473 486 511 2.49E-66 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 Gene3D G3DSA:1.20.1250.20 275 437 1.1E-17 T 11-11-2016 ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 Gene3D G3DSA:1.20.1250.20 487 510 1.1E-17 T 11-11-2016 ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 Pfam PF07690 Major Facilitator Superfamily 33 427 1.2E-52 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 Gene3D G3DSA:1.20.1250.20 33 209 2.9E-35 T 11-11-2016 ATY42_RS09730 456ed457e498c768728fd340589d68cd 526 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 29 507 4.9E-154 T 11-11-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 Pfam PF17137 Domain of unknown function (DUF5110) 860 928 4.7E-20 T 11-11-2016 IPR033403 Domain of unknown function DUF5110 ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 Gene3D G3DSA:3.90.182.10 227 426 8.1E-19 T 11-11-2016 IPR011658 PA14 domain ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 SUPERFAMILY SSF56988 255 351 2.22E-10 T 11-11-2016 ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 SMART SM00758 238 376 2.1E-27 T 11-11-2016 IPR011658 PA14 domain ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 SUPERFAMILY SSF74650 57 216 1.51E-26 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 Pfam PF16338 Domain of unknown function (DUF4968) 55 135 2.6E-13 T 11-11-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 SUPERFAMILY SSF51445 398 754 7.37E-48 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 SUPERFAMILY SSF51011 760 839 1.01E-21 T 11-11-2016 ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 Pfam PF07691 PA14 domain 276 351 2.5E-9 T 11-11-2016 IPR011658 PA14 domain ATY42_RS14530 ad01fc7cee702452ba2a4957c7b055cf 967 Pfam PF01055 Glycosyl hydrolases family 31 388 844 7.8E-125 T 11-11-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 473 43.076 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 467 1.2E-160 T 11-11-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Pfam PF08245 Mur ligase middle domain 120 299 3.3E-27 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Gene3D G3DSA:3.40.50.720 17 102 1.7E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 SUPERFAMILY SSF51984 17 102 4.58E-28 T 11-11-2016 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Pfam PF01225 Mur ligase family, catalytic domain 18 115 1.7E-26 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Gene3D G3DSA:3.40.1190.10 104 321 1.8E-81 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 SUPERFAMILY SSF53244 319 468 6.96E-44 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Gene3D G3DSA:3.90.190.20 322 469 3.2E-52 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 SUPERFAMILY SSF53623 101 317 2.22E-69 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19250 87e056cd3487e864943e0d28729679c3 477 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 410 2.4E-18 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS09955 4f5c654b876f7188c2c2e50444843c6c 254 SUPERFAMILY SSF55797 18 145 1.94E-7 T 11-11-2016 IPR014044 CAP domain ATY42_RS09955 4f5c654b876f7188c2c2e50444843c6c 254 Gene3D G3DSA:3.40.33.10 15 115 6.0E-5 T 11-11-2016 IPR014044 CAP domain ATY42_RS09955 4f5c654b876f7188c2c2e50444843c6c 254 Pfam PF00188 Cysteine-rich secretory protein family 25 146 1.5E-6 T 11-11-2016 IPR014044 CAP domain ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Gene3D G3DSA:2.40.50.140 66 129 2.3E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 SUPERFAMILY SSF50249 130 187 4.11E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.35 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 5.8E-73 T 11-11-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 SUPERFAMILY SSF50249 69 128 1.97E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Gene3D G3DSA:2.40.50.140 130 187 3.4E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 SMART SM01185 69 123 2.9E-19 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 SUPERFAMILY SSF50104 5 65 4.33E-17 T 11-11-2016 IPR008991 Translation protein SH3-like domain ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Gene3D G3DSA:2.30.30.30 6 65 4.9E-23 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 62 6.1E-21 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 PIRSF PIRSF005901 2 188 7.3E-63 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.1E-19 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 SMART SM00841 131 186 4.5E-32 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ATY42_RS13385 51b0f693f19b8d25851f1289665f4895 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.6E-25 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 41 420 2.1E-103 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 Pfam PF01546 Peptidase family M20/M25/M40 98 426 5.0E-33 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 Gene3D G3DSA:3.40.630.10 341 434 2.6E-99 T 11-11-2016 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 Gene3D G3DSA:3.40.630.10 21 218 2.6E-99 T 11-11-2016 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 SUPERFAMILY SSF53187 341 434 2.2E-80 T 11-11-2016 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 SUPERFAMILY SSF53187 29 237 2.2E-80 T 11-11-2016 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 Gene3D G3DSA:3.30.70.360 221 340 8.3E-32 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 PIRSF PIRSF005962 25 435 2.0E-117 T 11-11-2016 IPR017439 Amidohydrolase GO:0016787 ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 SUPERFAMILY SSF55031 223 331 4.58E-27 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS21080 242071ad1038fb8e681fbcad2ab4285a 438 Pfam PF07687 Peptidase dimerisation domain 226 323 9.0E-7 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF52172 890 1015 9.68E-25 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF13426 PAS domain 505 622 3.8E-13 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00091 493 560 1.2E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00091 350 416 1.5E-9 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00086 581 623 1.9E-6 T 11-11-2016 IPR001610 PAC motif ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00086 421 463 18.0 T 11-11-2016 IPR001610 PAC motif ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF55785 342 461 3.14E-19 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF47384 629 709 3.14E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:3.30.450.20 496 621 1.8E-19 T 11-11-2016 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF08448 PAS fold 357 465 2.0E-12 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:3.30.450.20 343 461 1.9E-18 T 11-11-2016 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00388 643 708 4.2E-23 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF55785 505 631 1.74E-18 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF55874 697 868 1.96E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 755 871 6.6E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00387 755 872 4.1E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 643 708 1.2E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF47226 1130 1143 6.93E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF47226 1179 1271 6.93E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00448 891 1007 3.5E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM00448 1032 1147 1.6E-34 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF01627 Hpt domain 1199 1281 8.4E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF00072 Response regulator receiver domain 893 1005 2.5E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF00072 Response regulator receiver domain 1035 1148 2.3E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:3.40.50.2300 887 1015 6.2E-26 T 11-11-2016 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SMART SM01079 83 271 9.6E-51 T 11-11-2016 IPR006189 CHASE domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 811 8.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 832 850 8.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 856 869 8.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 825 8.3E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:1.20.120.160 1190 1285 4.5E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 SUPERFAMILY SSF52172 1031 1153 1.57E-36 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 352 468 1.3E-16 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 496 630 1.1E-15 T 11-11-2016 IPR000014 PAS domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Pfam PF03924 CHASE domain 87 265 4.5E-37 T 11-11-2016 IPR006189 CHASE domain ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:1.10.287.130 635 694 2.0E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:3.40.50.2300 1030 1157 1.5E-40 T 11-11-2016 ATY42_RS13870 7125604eb8f7144126d0e41f6868720f 1364 Gene3D G3DSA:3.30.565.10 695 871 1.3E-45 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12130 970fc588f9a2934e0f017054d72d3bbc 163 SUPERFAMILY SSF50800 17 162 4.55E-37 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain ATY42_RS12130 970fc588f9a2934e0f017054d72d3bbc 163 Pfam PF03473 MOSC domain 57 160 4.1E-6 T 11-11-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ATY42_RS12130 970fc588f9a2934e0f017054d72d3bbc 163 Gene3D G3DSA:2.40.33.20 16 162 1.5E-39 T 11-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like ATY42_RS12180 2f8dd199f409d00d767b676a9bd5bbf0 182 SUPERFAMILY SSF53056 2 160 2.62E-46 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12180 2f8dd199f409d00d767b676a9bd5bbf0 182 Pfam PF00484 Carbonic anhydrase 2 146 2.2E-42 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12180 2f8dd199f409d00d767b676a9bd5bbf0 182 SMART SM00947 1 150 4.9E-40 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS12180 2f8dd199f409d00d767b676a9bd5bbf0 182 Gene3D G3DSA:3.40.1050.10 2 159 5.1E-52 T 11-11-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 Gene3D G3DSA:2.170.120.20 100 197 1.9E-25 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 188 30.005 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 189 1.5E-24 T 11-11-2016 IPR020057 Ribosomal protein L25, beta domain ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 SUPERFAMILY SSF50715 4 197 1.67E-55 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 97 1.0E-48 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 97 23.496 T 11-11-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 173 2.3E-38 T 11-11-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 Pfam PF01386 Ribosomal L25p family 7 94 7.0E-27 T 11-11-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ATY42_RS18150 da0676e2512fc7b01787cf5cd6dd543f 211 Gene3D G3DSA:2.40.240.10 6 97 4.8E-34 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.6E-40 T 11-11-2016 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 Gene3D G3DSA:3.30.1140.32 108 207 2.1E-46 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 5.5E-95 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 SMART SM00322 60 125 1.5E-10 T 11-11-2016 IPR004087 K Homology domain GO:0003676 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.074 T 11-11-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 Gene3D G3DSA:3.30.300.20 17 107 1.1E-33 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-11-2016 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 SUPERFAMILY SSF54821 108 206 1.83E-40 T 11-11-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 Pfam PF07650 KH domain 38 111 1.1E-19 T 11-11-2016 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18015 e08367b2d0efa6203a468c3a77ea171a 244 SUPERFAMILY SSF54814 2 106 1.49E-37 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ATY42_RS04300 3f9cdc9a32548ebda045085e8a81c485 298 ProSitePatterns PS00161 Isocitrate lyase signature. 124 129 - T 11-11-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 ATY42_RS04300 3f9cdc9a32548ebda045085e8a81c485 298 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 7 295 48.093 T 11-11-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ATY42_RS04300 3f9cdc9a32548ebda045085e8a81c485 298 Pfam PF13714 Phosphoenolpyruvate phosphomutase 13 257 4.3E-48 T 11-11-2016 ATY42_RS04300 3f9cdc9a32548ebda045085e8a81c485 298 Gene3D G3DSA:3.20.20.60 9 289 7.9E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS04300 3f9cdc9a32548ebda045085e8a81c485 298 SUPERFAMILY SSF51621 7 293 1.35E-98 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS04300 3f9cdc9a32548ebda045085e8a81c485 298 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 10 294 2.8E-124 T 11-11-2016 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ATY42_RS04470 0e0bc38b2c0d899321c331e216390ba7 459 Pfam PF02321 Outer membrane efflux protein 24 209 7.0E-25 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS04470 0e0bc38b2c0d899321c331e216390ba7 459 Pfam PF02321 Outer membrane efflux protein 234 430 2.4E-34 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS04470 0e0bc38b2c0d899321c331e216390ba7 459 Gene3D G3DSA:1.20.1600.10 18 433 5.0E-86 T 11-11-2016 ATY42_RS04470 0e0bc38b2c0d899321c331e216390ba7 459 SUPERFAMILY SSF56954 23 445 1.44E-88 T 11-11-2016 ATY42_RS04470 0e0bc38b2c0d899321c331e216390ba7 459 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 445 4.3E-129 T 11-11-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Pfam PF01627 Hpt domain 670 747 6.0E-13 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SMART SM00448 497 613 1.6E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SMART SM00388 110 175 5.4E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Pfam PF00512 His Kinase A (phospho-acceptor) domain 110 174 3.9E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Gene3D G3DSA:3.40.50.2300 493 620 2.5E-43 T 11-11-2016 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SUPERFAMILY SSF47226 646 753 9.42E-25 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SMART SM00387 222 338 1.0E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 316 8.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 335 8.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 277 8.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 291 8.7E-18 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Pfam PF00072 Response regulator receiver domain 499 611 3.9E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 222 336 1.2E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SUPERFAMILY SSF52172 496 619 4.7E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SUPERFAMILY SSF55874 164 336 7.6E-50 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Gene3D G3DSA:1.10.287.130 103 171 1.2E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Gene3D G3DSA:1.20.120.160 645 753 1.3E-27 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 Gene3D G3DSA:3.30.565.10 181 336 4.9E-51 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SUPERFAMILY SSF47384 93 176 5.1E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS02465 bb9ce7001d7f9907db8eba9772badacc 769 SMART SM00073 659 753 6.4E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS02145 d7b8d9ca6f4467404506a646efef389d 540 Pfam PF01494 FAD binding domain 6 191 1.7E-10 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 ATY42_RS02145 d7b8d9ca6f4467404506a646efef389d 540 Gene3D G3DSA:3.50.50.60 4 265 1.6E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS02145 d7b8d9ca6f4467404506a646efef389d 540 SUPERFAMILY SSF51905 3 191 3.53E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS02145 d7b8d9ca6f4467404506a646efef389d 540 SUPERFAMILY SSF51905 306 391 3.53E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 Pfam PF00005 ABC transporter 18 164 1.5E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 SUPERFAMILY SSF52540 3 243 1.21E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.9E-112 T 11-11-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 Gene3D G3DSA:3.40.50.300 3 239 1.2E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 Pfam PF12857 TOBE-like domain 282 336 5.1E-8 T 11-11-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 SMART SM00382 27 214 1.2E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS18570 e27edbe1bf5c5d02edf34321dbc70875 344 SUPERFAMILY SSF50331 240 338 3.74E-9 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 TIGRFAM TIGR00510 lipA: lipoyl synthase 48 330 3.2E-132 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 SUPERFAMILY SSF102114 66 329 1.83E-63 T 11-11-2016 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 SMART SM00729 97 305 2.0E-18 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 Pfam PF04055 Radical SAM superfamily 103 267 7.1E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 PIRSF PIRSF005963 1 336 4.4E-138 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 Hamap MF_00206 Lipoyl synthase [lipA]. 50 337 150.594 T 11-11-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 49 86 3.8E-8 T 11-11-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS19875 3937f77d09528f02d167248c918a538b 337 Gene3D G3DSA:3.20.20.70 69 329 4.1E-69 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS05485 e705cb2eefa53d4ec68acfc79e06b6f7 156 Gene3D G3DSA:3.10.590.10 6 153 1.1E-31 T 11-11-2016 IPR002740 EVE domain ATY42_RS05485 e705cb2eefa53d4ec68acfc79e06b6f7 156 Pfam PF01878 EVE domain 6 153 1.1E-55 T 11-11-2016 IPR002740 EVE domain ATY42_RS05485 e705cb2eefa53d4ec68acfc79e06b6f7 156 SUPERFAMILY SSF88697 5 155 4.64E-60 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS00055 89d83ae1f36898a70b78fb8a390f7f2c 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 3.9E-25 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 236 325 3.0E-37 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 Gene3D G3DSA:3.40.47.10 165 324 4.4E-54 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 325 72.238 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 187 1.6E-35 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 SUPERFAMILY SSF53901 7 325 1.92E-75 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 324 7.1E-135 T 11-11-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS04235 e0d1eefe94dc361ba5c0daeb5182c9ec 325 Gene3D G3DSA:3.40.47.10 6 164 2.1E-68 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09740 75506df290d51f080b9edb343389aeaa 86 Pfam PF13586 Transposase DDE domain 2 82 8.2E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 Pfam PF13365 Trypsin-like peptidase domain 111 246 2.7E-32 T 11-11-2016 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 SUPERFAMILY SSF50156 287 381 2.1E-20 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 Gene3D G3DSA:2.30.42.10 411 473 1.6E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 Gene3D G3DSA:2.40.10.10 177 289 2.4E-43 T 11-11-2016 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 SUPERFAMILY SSF50494 108 297 1.15E-62 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 SUPERFAMILY SSF50494 43 80 1.15E-62 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 Gene3D G3DSA:2.40.10.10 53 176 2.5E-32 T 11-11-2016 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 PRINTS PR00834 HtrA/DegQ protease family signature 328 340 1.1E-51 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 PRINTS PR00834 HtrA/DegQ protease family signature 239 256 1.1E-51 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 1.1E-51 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 PRINTS PR00834 HtrA/DegQ protease family signature 142 162 1.1E-51 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 PRINTS PR00834 HtrA/DegQ protease family signature 182 206 1.1E-51 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 PRINTS PR00834 HtrA/DegQ protease family signature 121 133 1.1E-51 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 SMART SM00228 288 370 5.7E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 SMART SM00228 394 470 0.43 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 Gene3D G3DSA:2.30.42.10 290 383 2.0E-25 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 SUPERFAMILY SSF50156 397 474 5.13E-8 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 Pfam PF13180 PDZ domain 290 379 2.7E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS00570 e9033351204bd8dd75438b8da2ecc85d 478 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 61 473 2.1E-126 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ATY42_RS03935 fde235a00d3e3f496d14e23e722ea085 394 Pfam PF13546 DDE superfamily endonuclease 1 246 1.1E-80 T 11-11-2016 ATY42_RS03935 fde235a00d3e3f496d14e23e722ea085 394 SUPERFAMILY SSF53098 14 358 3.94E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21050 fde235a00d3e3f496d14e23e722ea085 394 Pfam PF13546 DDE superfamily endonuclease 1 246 1.1E-80 T 11-11-2016 ATY42_RS21050 fde235a00d3e3f496d14e23e722ea085 394 SUPERFAMILY SSF53098 14 358 3.94E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16265 b59d12e9c319ad8d9a6c636b1c78a387 153 Pfam PF03840 Preprotein translocase SecG subunit 5 72 7.7E-19 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATY42_RS16265 b59d12e9c319ad8d9a6c636b1c78a387 153 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 4.3E-35 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATY42_RS16265 b59d12e9c319ad8d9a6c636b1c78a387 153 PRINTS PR01651 Protein-export SecG membrane protein signature 39 55 4.3E-35 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATY42_RS16265 b59d12e9c319ad8d9a6c636b1c78a387 153 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 4.3E-35 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATY42_RS16265 b59d12e9c319ad8d9a6c636b1c78a387 153 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 4.3E-35 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATY42_RS16265 b59d12e9c319ad8d9a6c636b1c78a387 153 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 73 4.2E-22 T 11-11-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 TIGRFAM TIGR01273 speA: arginine decarboxylase 4 623 6.1E-260 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 SUPERFAMILY SSF50621 448 563 6.7E-7 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 270 286 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 Gene3D G3DSA:2.40.37.10 328 352 5.1E-15 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 Gene3D G3DSA:2.40.37.10 447 574 5.1E-15 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 329 348 2.2E-15 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 96 114 2.2E-15 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 235 248 2.2E-15 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 534 547 2.2E-15 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 119 131 2.2E-15 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 Gene3D G3DSA:3.20.20.10 66 327 1.3E-53 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 80 340 7.1E-46 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 SUPERFAMILY SSF51419 64 341 4.11E-62 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 64 79 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 534 555 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 456 477 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 88 102 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 142 157 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 192 214 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 481 506 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 168 189 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PRINTS PR01180 Arginine decarboxylase signature 319 336 1.3E-67 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 415 553 6.0E-24 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 PIRSF PIRSF001336 1 625 4.9E-239 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS00950 89876c50dc7cbdebde13d370d4955182 628 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 624 42.542 T 11-11-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 ATY42_RS10555 8ac8d54d9b48dfa8fe2bbf0b97b26cf3 456 SUPERFAMILY SSF53850 28 408 4.62E-87 T 11-11-2016 ATY42_RS10555 8ac8d54d9b48dfa8fe2bbf0b97b26cf3 456 Gene3D G3DSA:3.40.190.10 29 142 3.0E-48 T 11-11-2016 ATY42_RS10555 8ac8d54d9b48dfa8fe2bbf0b97b26cf3 456 Gene3D G3DSA:3.40.190.10 297 369 3.0E-48 T 11-11-2016 ATY42_RS10555 8ac8d54d9b48dfa8fe2bbf0b97b26cf3 456 Pfam PF13416 Bacterial extracellular solute-binding protein 44 353 4.6E-41 T 11-11-2016 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Gene3D G3DSA:2.40.30.10 236 296 6.5E-29 T 11-11-2016 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Gene3D G3DSA:2.40.30.10 402 472 6.5E-29 T 11-11-2016 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 SUPERFAMILY SSF52343 462 615 8.38E-48 T 11-11-2016 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Gene3D G3DSA:1.20.990.10 297 401 6.5E-31 T 11-11-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 SUPERFAMILY SSF52218 68 215 1.82E-43 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Gene3D G3DSA:3.40.50.360 62 215 1.2E-43 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 404 411 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 286 296 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 1.4E-22 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Pfam PF00175 Oxidoreductase NAD-binding domain 474 579 3.3E-18 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 SUPERFAMILY SSF63380 233 463 6.5E-54 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00369 Flavodoxin signature 175 194 3.3E-16 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00369 Flavodoxin signature 151 161 3.3E-16 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00369 Flavodoxin signature 119 130 3.3E-16 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PRINTS PR00369 Flavodoxin signature 71 84 3.3E-16 T 11-11-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Pfam PF00667 FAD binding domain 270 442 4.7E-19 T 11-11-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 PIRSF PIRSF000207 1 615 1.0E-199 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 615 5.4E-251 T 11-11-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Pfam PF00258 Flavodoxin 72 195 6.7E-31 T 11-11-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ATY42_RS17015 e20cf36914f77e8ac05277116ef6bfa0 615 Gene3D G3DSA:3.40.50.80 473 614 6.9E-53 T 11-11-2016 ATY42_RS00725 649868d034d2f718fd0153f67f3946d6 608 Pfam PF13482 RNase_H superfamily 417 591 3.4E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00725 649868d034d2f718fd0153f67f3946d6 608 SUPERFAMILY SSF53098 369 594 4.0E-23 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00725 649868d034d2f718fd0153f67f3946d6 608 Gene3D G3DSA:3.30.420.10 417 598 2.7E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 26 484 2.8E-157 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Gene3D G3DSA:2.20.200.10 120 160 1.8E-13 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Gene3D G3DSA:2.20.200.10 334 369 1.8E-13 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Gene3D G3DSA:1.20.1600.10 161 333 1.9E-91 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Gene3D G3DSA:1.20.1600.10 70 109 1.9E-91 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Gene3D G3DSA:1.20.1600.10 371 485 1.9E-91 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 SUPERFAMILY SSF56954 74 486 4.45E-101 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 SUPERFAMILY SSF56954 12 49 4.45E-101 T 11-11-2016 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Pfam PF02321 Outer membrane efflux protein 306 482 8.6E-25 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS09720 3658acd4840ee55b02097fde32470ef6 505 Pfam PF02321 Outer membrane efflux protein 83 273 3.1E-25 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 210 272 4.4E-19 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 Gene3D G3DSA:3.30.460.10 26 179 2.2E-47 T 11-11-2016 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 SUPERFAMILY SSF81891 183 414 8.24E-45 T 11-11-2016 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 448 37.854 T 11-11-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 Pfam PF12626 Polymerase A arginine-rich C-terminus 326 448 2.1E-33 T 11-11-2016 IPR025866 Polymerase A arginine-rich C-terminal domain ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 25 450 1.0E-152 T 11-11-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 Pfam PF01743 Poly A polymerase head domain 56 182 3.1E-35 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 SUPERFAMILY SSF81301 27 180 9.59E-40 T 11-11-2016 ATY42_RS11755 7e306e4068c958ec686bbad34ebf874f 455 Gene3D G3DSA:1.10.3090.10 180 412 8.8E-43 T 11-11-2016 ATY42_RS07290 1a74345bd85d46d7cf761cd5338434ee 302 SUPERFAMILY SSF53335 8 297 7.75E-79 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS07290 1a74345bd85d46d7cf761cd5338434ee 302 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 288 39.597 T 11-11-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ATY42_RS07290 1a74345bd85d46d7cf761cd5338434ee 302 Gene3D G3DSA:3.40.50.150 1 300 1.3E-101 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS07290 1a74345bd85d46d7cf761cd5338434ee 302 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 32 298 2.2E-94 T 11-11-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 ATY42_RS18485 7cba22ab6b54abf2786ae91a4f426b25 378 SUPERFAMILY SSF53756 2 363 2.3E-74 T 11-11-2016 ATY42_RS18485 7cba22ab6b54abf2786ae91a4f426b25 378 Pfam PF13439 Glycosyltransferase Family 4 14 177 2.1E-24 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATY42_RS18485 7cba22ab6b54abf2786ae91a4f426b25 378 Pfam PF00534 Glycosyl transferases group 1 190 344 2.7E-25 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS18485 7cba22ab6b54abf2786ae91a4f426b25 378 Gene3D G3DSA:3.40.50.2000 173 344 1.3E-23 T 11-11-2016 ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 Pfam PF08274 PhnA Zinc-Ribbon 4 32 2.0E-9 T 11-11-2016 IPR013987 PhnA protein, N-terminal ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 4 111 2.5E-30 T 11-11-2016 IPR004624 PhnA protein ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 SUPERFAMILY SSF57783 3 36 2.55E-11 T 11-11-2016 ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 Gene3D G3DSA:2.20.25.10 1 39 2.7E-17 T 11-11-2016 ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 Gene3D G3DSA:2.30.30.40 41 111 5.3E-31 T 11-11-2016 ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 SUPERFAMILY SSF82057 40 111 3.43E-24 T 11-11-2016 ATY42_RS09220 6da3264b1dfba88fd98d30781a1de93b 111 Pfam PF03831 PhnA domain 43 111 2.9E-30 T 11-11-2016 IPR013988 PhnA protein, C-terminal ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 118 1.5E-37 T 11-11-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 247 365 1.6E-34 T 11-11-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 SMART SM00480 17 362 9.3E-138 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.3E-36 T 11-11-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 Gene3D G3DSA:3.10.150.10 122 248 1.0E-37 T 11-11-2016 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 SUPERFAMILY SSF55979 127 244 3.14E-29 T 11-11-2016 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 5.0E-106 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 SUPERFAMILY SSF55979 246 366 2.9E-34 T 11-11-2016 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 Gene3D G3DSA:3.10.150.10 1 121 4.5E-32 T 11-11-2016 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 PIRSF PIRSF000804 1 366 1.6E-121 T 11-11-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 Gene3D G3DSA:3.10.150.10 249 366 1.3E-36 T 11-11-2016 ATY42_RS00010 ebdfc68b05062860610f10e48418f9da 366 SUPERFAMILY SSF55979 1 116 2.57E-26 T 11-11-2016 ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 9 790 1.7E-207 T 11-11-2016 ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 9 1071 3.5E-304 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 SUPERFAMILY SSF52980 806 1108 4.24E-51 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 PIRSF PIRSF000980 8 1117 0.0 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 Gene3D G3DSA:1.10.10.160 95 174 1.6E-13 T 11-11-2016 IPR013986 DExx box DNA helicase domain ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 SUPERFAMILY SSF52540 345 793 2.92E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 SUPERFAMILY SSF52540 9 331 2.81E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22480 4770a3215f7ea0480773755949bb84e1 1137 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 8 1115 16.833 T 11-11-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 ATY42_RS09055 18e1e26b58b930a2f73574ebd00a5a27 250 SUPERFAMILY SSF53167 7 248 9.35E-72 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ATY42_RS09055 18e1e26b58b930a2f73574ebd00a5a27 250 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 6 250 32.754 T 11-11-2016 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112 ATY42_RS09055 18e1e26b58b930a2f73574ebd00a5a27 250 Gene3D G3DSA:3.40.50.1580 5 247 6.7E-71 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ATY42_RS09055 18e1e26b58b930a2f73574ebd00a5a27 250 Pfam PF01048 Phosphorylase superfamily 8 242 1.1E-36 T 11-11-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ATY42_RS09055 18e1e26b58b930a2f73574ebd00a5a27 250 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 54 94 - T 11-11-2016 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 ATY42_RS14640 eba7c018dd109ae9d92eae583e84f881 233 SUPERFAMILY SSF51182 1 232 8.69E-73 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS14640 eba7c018dd109ae9d92eae583e84f881 233 PIRSF PIRSF006232 1 230 1.6E-52 T 11-11-2016 IPR012093 Pirin ATY42_RS14640 eba7c018dd109ae9d92eae583e84f881 233 Pfam PF02678 Pirin 7 119 1.3E-32 T 11-11-2016 IPR003829 Pirin, N-terminal domain ATY42_RS14640 eba7c018dd109ae9d92eae583e84f881 233 Gene3D G3DSA:2.60.120.10 4 231 4.4E-70 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 SUPERFAMILY SSF101801 29 110 1.7E-25 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 33 102 1.3E-25 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 Gene3D G3DSA:2.30.330.10 21 112 1.3E-37 T 11-11-2016 ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 29 104 2.0E-34 T 11-11-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 65 78 3.2E-26 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 32 48 3.2E-26 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 49 65 3.2E-26 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATY42_RS12935 77807ee3edd7de11727e41fd12d8c145 112 PRINTS PR00956 Flagellar motor switch protein FliN signature 78 93 3.2E-26 T 11-11-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 SUPERFAMILY SSF46548 130 257 1.1E-39 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 79 87 - T 11-11-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 Pfam PF13534 4Fe-4S dicluster domain 170 243 2.5E-9 T 11-11-2016 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 28 133 2.1E-33 T 11-11-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 SUPERFAMILY SSF54292 27 128 7.48E-31 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 Gene3D G3DSA:3.10.20.30 21 128 1.4E-43 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 31 252 3.9E-84 T 11-11-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 Gene3D G3DSA:1.10.1060.10 130 257 1.2E-49 T 11-11-2016 ATY42_RS11425 dadf9cdd70b72b279f4861af3bcf1ff1 260 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 SUPERFAMILY SSF63829 34 297 5.23E-60 T 11-11-2016 ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 43 281 3.2E-45 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 162 184 1.8E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 185 205 1.8E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 264 282 1.8E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 222 239 1.8E-10 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS18755 5f8f0aa944acbccce6ce8d9e02071a33 301 Gene3D G3DSA:2.120.10.30 41 298 1.5E-57 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS02700 ed919f815336f56440ae0e688bb18cb9 453 Pfam PF13546 DDE superfamily endonuclease 32 305 5.2E-91 T 11-11-2016 ATY42_RS02700 ed919f815336f56440ae0e688bb18cb9 453 SUPERFAMILY SSF53098 32 417 6.14E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00155 ed919f815336f56440ae0e688bb18cb9 453 Pfam PF13546 DDE superfamily endonuclease 32 305 5.2E-91 T 11-11-2016 ATY42_RS00155 ed919f815336f56440ae0e688bb18cb9 453 SUPERFAMILY SSF53098 32 417 6.14E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15510 ed919f815336f56440ae0e688bb18cb9 453 Pfam PF13546 DDE superfamily endonuclease 32 305 5.2E-91 T 11-11-2016 ATY42_RS15510 ed919f815336f56440ae0e688bb18cb9 453 SUPERFAMILY SSF53098 32 417 6.14E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16955 fd4519a2c37bb3fc1da03db1045d38c1 469 SUPERFAMILY SSF53474 52 448 2.48E-80 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS16955 fd4519a2c37bb3fc1da03db1045d38c1 469 Pfam PF00135 Carboxylesterase family 51 442 6.7E-68 T 11-11-2016 IPR002018 Carboxylesterase, type B ATY42_RS16955 fd4519a2c37bb3fc1da03db1045d38c1 469 Gene3D G3DSA:3.40.50.1820 51 464 3.6E-87 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS16955 fd4519a2c37bb3fc1da03db1045d38c1 469 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 166 181 - T 11-11-2016 IPR019826 Carboxylesterase type B, active site ATY42_RS01585 e8f5a7a34e055ad7ce95636d633f3443 209 SMART SM00563 59 171 1.6E-24 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS01585 e8f5a7a34e055ad7ce95636d633f3443 209 SUPERFAMILY SSF69593 20 186 9.55E-23 T 11-11-2016 ATY42_RS01585 e8f5a7a34e055ad7ce95636d633f3443 209 Pfam PF01553 Acyltransferase 59 168 1.6E-11 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS23125 506c70f58adfc3518d2a17527380419c 398 Gene3D G3DSA:3.40.50.300 216 365 2.6E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23125 506c70f58adfc3518d2a17527380419c 398 Gene3D G3DSA:3.40.50.300 1 158 2.6E-34 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23125 506c70f58adfc3518d2a17527380419c 398 PIRSF PIRSF029347 1 374 5.4E-36 T 11-11-2016 IPR014555 RecF-like ATY42_RS23125 506c70f58adfc3518d2a17527380419c 398 SUPERFAMILY SSF52540 218 350 2.8E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23125 506c70f58adfc3518d2a17527380419c 398 SUPERFAMILY SSF52540 1 175 2.8E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23125 506c70f58adfc3518d2a17527380419c 398 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 343 5.6E-26 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS04510 5389b4563969483d69ebe84d477c12fb 215 Pfam PF00694 Aconitase C-terminal domain 1 132 2.2E-38 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04510 5389b4563969483d69ebe84d477c12fb 215 Gene3D G3DSA:3.20.19.10 1 201 4.6E-51 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS04510 5389b4563969483d69ebe84d477c12fb 215 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 196 1.9E-89 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ATY42_RS04510 5389b4563969483d69ebe84d477c12fb 215 SUPERFAMILY SSF52016 1 201 8.04E-64 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS04510 5389b4563969483d69ebe84d477c12fb 215 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 210 44.643 T 11-11-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ATY42_RS11605 6a4c98de1fad44923ffeab71ea592ae2 259 Gene3D G3DSA:3.40.50.80 99 258 3.2E-44 T 11-11-2016 ATY42_RS11605 6a4c98de1fad44923ffeab71ea592ae2 259 SUPERFAMILY SSF52343 104 257 9.17E-40 T 11-11-2016 ATY42_RS11605 6a4c98de1fad44923ffeab71ea592ae2 259 Pfam PF00970 Oxidoreductase FAD-binding domain 19 99 8.0E-7 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 ATY42_RS11605 6a4c98de1fad44923ffeab71ea592ae2 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 229 2.2E-7 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATY42_RS11605 6a4c98de1fad44923ffeab71ea592ae2 259 Gene3D G3DSA:2.40.30.10 8 98 4.0E-31 T 11-11-2016 ATY42_RS11605 6a4c98de1fad44923ffeab71ea592ae2 259 SUPERFAMILY SSF63380 8 100 8.6E-25 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS17380 11f701dd30f680e7c3b7253c876db49c 330 Pfam PF04471 Restriction endonuclease 194 305 2.6E-23 T 11-11-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 ATY42_RS17380 11f701dd30f680e7c3b7253c876db49c 330 PIRSF PIRSF031853 1 330 1.0E-150 T 11-11-2016 IPR016984 Uncharacterised conserved protein UCP031853 ATY42_RS17380 11f701dd30f680e7c3b7253c876db49c 330 Gene3D G3DSA:3.40.1350.10 187 305 4.3E-11 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 ATY42_RS17380 11f701dd30f680e7c3b7253c876db49c 330 SUPERFAMILY SSF52980 197 309 1.34E-11 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 Gene3D G3DSA:3.30.559.10 165 397 5.8E-94 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 Gene3D G3DSA:4.10.320.10 123 161 2.3E-10 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 SUPERFAMILY SSF47005 114 158 2.88E-8 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 399 3.1E-177 T 11-11-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 SUPERFAMILY SSF51230 1 95 1.96E-26 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 Pfam PF00364 Biotin-requiring enzyme 4 76 1.9E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 Gene3D G3DSA:2.40.50.100 1 96 1.0E-27 T 11-11-2016 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 Pfam PF02817 e3 binding domain 123 153 1.3E-6 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 170 397 2.7E-83 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS09915 4d1d96a3c487d2104e8e0855f0585c5f 400 SUPERFAMILY SSF52777 170 398 1.82E-88 T 11-11-2016 ATY42_RS20020 c1bac32559caa441dea01e92875c1e8a 296 Gene3D G3DSA:3.30.70.270 132 283 5.4E-37 T 11-11-2016 ATY42_RS20020 c1bac32559caa441dea01e92875c1e8a 296 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 126 281 5.0E-30 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20020 c1bac32559caa441dea01e92875c1e8a 296 SMART SM00267 119 285 5.7E-26 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20020 c1bac32559caa441dea01e92875c1e8a 296 Pfam PF00672 HAMP domain 53 119 1.8E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS20020 c1bac32559caa441dea01e92875c1e8a 296 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 279 5.6E-30 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20020 c1bac32559caa441dea01e92875c1e8a 296 SUPERFAMILY SSF55073 135 283 1.57E-34 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 SUPERFAMILY SSF55831 3 264 1.57E-128 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 Pfam PF00303 Thymidylate synthase 3 264 4.7E-120 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 Gene3D G3DSA:3.30.572.10 2 264 2.3E-130 T 11-11-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.5E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.5E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.5E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.5E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.5E-49 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-11-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 5.6E-97 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 6.1E-42 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS18900 408ccfed9811fe703d504f1659afd169 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.47 T 11-11-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-113510|Reactome: R-HSA-500753|Reactome: R-HSA-69205 ATY42_RS15865 a4c44ed2f6a60a01cdc464e7b1bb7986 106 Pfam PF04703 FaeA-like protein 55 91 2.8E-4 T 11-11-2016 IPR006793 FaeA-like protein GO:0006355|GO:0009289 ATY42_RS15865 a4c44ed2f6a60a01cdc464e7b1bb7986 106 Gene3D G3DSA:1.10.10.10 55 92 1.9E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01385 da1e0a089f81d77bb7594432fdd24084 96 SUPERFAMILY SSF52091 11 73 1.02E-8 T 11-11-2016 IPR002645 STAS domain ATY42_RS01385 da1e0a089f81d77bb7594432fdd24084 96 Gene3D G3DSA:3.30.750.24 13 68 9.9E-7 T 11-11-2016 IPR002645 STAS domain ATY42_RS01385 da1e0a089f81d77bb7594432fdd24084 96 Pfam PF13466 STAS domain 13 77 1.2E-10 T 11-11-2016 IPR002645 STAS domain ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 SMART SM00382 57 230 2.4E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 PRINTS PR00142 RecA protein signature 165 194 2.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 PRINTS PR00142 RecA protein signature 127 156 2.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 PRINTS PR00142 RecA protein signature 212 240 2.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 PRINTS PR00142 RecA protein signature 93 122 2.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 PRINTS PR00142 RecA protein signature 299 316 2.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 PRINTS PR00142 RecA protein signature 245 274 2.8E-85 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 ProSitePatterns PS00321 recA signature. 215 223 - T 11-11-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 SUPERFAMILY SSF52540 4 269 1.75E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 Hamap MF_00268 Protein RecA [recA]. 5 331 50.275 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 Pfam PF00154 recA bacterial DNA recombination protein 7 270 1.3E-138 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 SUPERFAMILY SSF54752 270 327 1.06E-20 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 Gene3D G3DSA:3.40.50.300 34 269 2.4E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 326 3.6E-164 T 11-11-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ATY42_RS14700 0333d8c606cb32a7617bfcbb1ae43b09 344 Gene3D G3DSA:3.30.250.10 270 328 8.3E-28 T 11-11-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal ATY42_RS12220 effb8453731297e6ecccd2c4d123b7e4 363 PIRSF PIRSF002756 4 361 2.2E-105 T 11-11-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ATY42_RS12220 effb8453731297e6ecccd2c4d123b7e4 363 Pfam PF12849 PBP superfamily domain 42 332 2.1E-60 T 11-11-2016 IPR024370 PBP domain ATY42_RS12220 effb8453731297e6ecccd2c4d123b7e4 363 SUPERFAMILY SSF53850 52 359 1.92E-97 T 11-11-2016 ATY42_RS12220 effb8453731297e6ecccd2c4d123b7e4 363 Gene3D G3DSA:3.40.190.10 51 193 2.6E-53 T 11-11-2016 ATY42_RS12220 effb8453731297e6ecccd2c4d123b7e4 363 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 52 359 1.9E-124 T 11-11-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ATY42_RS12220 effb8453731297e6ecccd2c4d123b7e4 363 Gene3D G3DSA:3.40.190.10 204 361 7.7E-36 T 11-11-2016 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Gene3D G3DSA:1.10.8.60 781 858 1.8E-30 T 11-11-2016 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 SUPERFAMILY SSF81923 4 156 5.3E-40 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Gene3D G3DSA:3.40.50.300 160 341 1.7E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 SMART SM01086 769 858 1.9E-37 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 SMART SM00382 198 344 3.1E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 SMART SM00382 597 770 9.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 763 5.6E-55 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 SUPERFAMILY SSF52540 159 545 2.12E-99 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Gene3D G3DSA:1.10.1780.10 1 147 1.1E-42 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 769 849 1.5E-26 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 SUPERFAMILY SSF52540 546 852 2.59E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 858 0.0 T 11-11-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Gene3D G3DSA:1.10.8.60 343 429 3.6E-37 T 11-11-2016 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 7.0E-13 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Gene3D G3DSA:3.40.50.300 550 780 1.3E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 145 4.3E-8 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 5.7E-12 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS06565 0c1fa4822754948ceaca0eb0e78c0732 861 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.2E-41 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 Pfam PF03705 CheR methyltransferase, all-alpha domain 261 308 4.7E-11 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 Pfam PF01339 CheB methylesterase 68 234 7.3E-17 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 SUPERFAMILY SSF52738 71 243 1.27E-21 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 SMART SM00138 258 495 1.2E-53 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 SUPERFAMILY SSF53335 324 494 2.38E-44 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 PRINTS PR00996 Glutamate methyltransferase family signature 393 409 1.3E-22 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 PRINTS PR00996 Glutamate methyltransferase family signature 317 329 1.3E-22 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 PRINTS PR00996 Glutamate methyltransferase family signature 459 473 1.3E-22 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 PRINTS PR00996 Glutamate methyltransferase family signature 280 293 1.3E-22 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 PRINTS PR00996 Glutamate methyltransferase family signature 357 377 1.3E-22 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 PRINTS PR00996 Glutamate methyltransferase family signature 478 495 1.3E-22 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 Gene3D G3DSA:1.10.155.10 259 321 1.1E-10 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 Gene3D G3DSA:3.40.50.180 53 241 6.6E-25 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 Pfam PF01739 CheR methyltransferase, SAM binding domain 325 494 1.2E-45 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 SUPERFAMILY SSF47757 258 326 2.48E-11 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS03105 ec66b149db0d4d7a15dc805ebbeb1895 495 Gene3D G3DSA:3.40.50.150 323 494 5.2E-56 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS16285 921ebb8a36f073f444be79666b086d1f 142 SUPERFAMILY SSF46458 17 141 2.04E-29 T 11-11-2016 IPR009050 Globin-like ATY42_RS16285 921ebb8a36f073f444be79666b086d1f 142 Gene3D G3DSA:1.10.490.10 18 141 6.9E-33 T 11-11-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ATY42_RS16285 921ebb8a36f073f444be79666b086d1f 142 PIRSF PIRSF002030 14 142 7.5E-45 T 11-11-2016 IPR016339 Truncated hemoglobin, group 1 ATY42_RS16285 921ebb8a36f073f444be79666b086d1f 142 Pfam PF01152 Bacterial-like globin 27 139 3.2E-11 T 11-11-2016 IPR001486 Truncated hemoglobin GO:0019825 ATY42_RS14660 07f98efbbdb5322d87d991935ec0abbc 249 PIRSF PIRSF000507 3 240 2.5E-85 T 11-11-2016 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 ATY42_RS14660 07f98efbbdb5322d87d991935ec0abbc 249 SUPERFAMILY SSF52540 6 113 1.76E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14660 07f98efbbdb5322d87d991935ec0abbc 249 Gene3D G3DSA:3.40.50.300 7 117 2.7E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14660 07f98efbbdb5322d87d991935ec0abbc 249 Pfam PF01745 Isopentenyl transferase 5 234 1.6E-91 T 11-11-2016 IPR002648 Adenylate dimethylallyltransferase GO:0004161|GO:0009058 KEGG: 00908+2.5.1.27|MetaCyc: PWY-2681 ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 Pfam PF00696 Amino acid kinase family 44 256 8.4E-31 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 TIGRFAM TIGR00761 argB: acetylglutamate kinase 43 262 1.5E-61 T 11-11-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 PIRSF PIRSF036441 22 447 6.3E-289 T 11-11-2016 IPR011242 Acetylglutamate kinase argB GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 SUPERFAMILY SSF55729 305 391 1.52E-5 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 SUPERFAMILY SSF53633 17 294 9.56E-54 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 Gene3D G3DSA:3.40.1160.10 41 292 1.2E-69 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS13220 2833e046a678dcc9b4b8535dd2a52a89 447 Pfam PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase 276 439 1.1E-54 T 11-11-2016 IPR006855 Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|Reactome: R-HSA-70635 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 SUPERFAMILY SSF53474 2 267 7.42E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 2.1E-10 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 213 227 2.1E-10 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 2.1E-10 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 2.1E-10 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 Gene3D G3DSA:3.40.50.1820 5 267 4.5E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 Pfam PF00561 alpha/beta hydrolase fold 23 148 1.1E-18 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00412 Epoxide hydrolase signature 45 60 6.8E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00412 Epoxide hydrolase signature 104 117 6.8E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ATY42_RS14290 b2af0f55d71fe3202ad9582cec9d701b 271 PRINTS PR00412 Epoxide hydrolase signature 243 265 6.8E-8 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 Gene3D G3DSA:3.30.420.80 7 130 2.5E-52 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 SUPERFAMILY SSF53137 17 130 6.02E-46 T 11-11-2016 ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 11 127 3.0E-54 T 11-11-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 PIRSF PIRSF002131 1 130 4.0E-52 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 ProSitePatterns PS00054 Ribosomal protein S11 signature. 98 120 - T 11-11-2016 IPR018102 Ribosomal S11, conserved site ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 130 32.622 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATY42_RS17935 e8342c2bd9587564536df059f5e437d7 130 Pfam PF00411 Ribosomal protein S11 20 129 5.1E-50 T 11-11-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 131 6.1E-53 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 SUPERFAMILY SSF52317 153 372 8.25E-62 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 Pfam PF00117 Glutamine amidotransferase class-I 193 368 4.2E-45 T 11-11-2016 IPR017926 Glutamine amidotransferase ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 277 294 5.6E-38 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 302 313 5.6E-38 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 276 5.6E-38 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 190 204 5.6E-38 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 229 243 5.6E-38 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 SUPERFAMILY SSF52021 4 149 9.02E-57 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 374 48.244 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 371 3.4E-144 T 11-11-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 Gene3D G3DSA:3.50.30.20 4 143 6.9E-61 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 Gene3D G3DSA:3.40.50.880 153 371 1.3E-79 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 345 358 3.0E-10 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 241 3.0E-10 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 PRINTS PR00096 Glutamine amidotransferase superfamily signature 260 271 3.0E-10 T 11-11-2016 ATY42_RS14405 716d983469a0af01995b4f743a9ebb16 374 SMART SM01097 3 133 1.1E-88 T 11-11-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS13765 472bbd8f14ee3b46c179b09ccac1004c 138 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 2 132 6.8E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS13765 472bbd8f14ee3b46c179b09ccac1004c 138 SUPERFAMILY SSF161098 2 129 1.57E-35 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS13765 472bbd8f14ee3b46c179b09ccac1004c 138 Gene3D G3DSA:1.10.3720.10 2 127 7.6E-33 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS18880 42c50b2e87dc59d7d42808bc6aedb2c9 127 Hamap MF_00791 Protein ApaG [apaG]. 2 127 33.425 T 11-11-2016 IPR023065 Uncharacterised protein family ApaG ATY42_RS18880 42c50b2e87dc59d7d42808bc6aedb2c9 127 SUPERFAMILY SSF110069 8 127 3.92E-46 T 11-11-2016 IPR007474 ApaG domain ATY42_RS18880 42c50b2e87dc59d7d42808bc6aedb2c9 127 Gene3D G3DSA:2.60.40.1470 8 127 6.7E-45 T 11-11-2016 IPR007474 ApaG domain ATY42_RS18880 42c50b2e87dc59d7d42808bc6aedb2c9 127 Pfam PF04379 Protein of unknown function (DUF525) 20 104 3.0E-34 T 11-11-2016 IPR007474 ApaG domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 140 9.2E-25 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 SUPERFAMILY SSF54980 403 516 8.63E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Gene3D G3DSA:2.40.30.10 207 304 5.2E-26 T 11-11-2016 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 SMART SM00838 400 488 1.6E-4 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 604 6.9E-280 T 11-11-2016 IPR006298 GTP-binding protein TypA GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 SUPERFAMILY SSF50447 152 300 2.29E-32 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 SUPERFAMILY SSF54980 303 392 8.63E-15 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Pfam PF00009 Elongation factor Tu GTP binding domain 5 195 1.3E-54 T 11-11-2016 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Pfam PF00679 Elongation factor G C-terminus 401 480 6.6E-23 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Gene3D G3DSA:3.30.70.240 405 482 3.3E-32 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Pfam PF03144 Elongation factor Tu domain 2 220 290 3.3E-9 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 SUPERFAMILY SSF52540 3 208 3.13E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Gene3D G3DSA:3.30.70.870 305 404 1.2E-34 T 11-11-2016 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 PRINTS PR00315 GTP-binding elongation factor signature 52 60 5.6E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 PRINTS PR00315 GTP-binding elongation factor signature 124 133 5.6E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 PRINTS PR00315 GTP-binding elongation factor signature 72 82 5.6E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 PRINTS PR00315 GTP-binding elongation factor signature 8 21 5.6E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Gene3D G3DSA:3.40.50.300 4 206 4.0E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04665 b841d1c4aa1e5c6c5b1f4d671a1d4e07 609 Gene3D G3DSA:2.40.50.250 488 582 6.4E-36 T 11-11-2016 ATY42_RS18005 241e7995f8e11533448e8bd7eae4ffb6 61 SUPERFAMILY SSF46561 1 59 1.7E-18 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18005 241e7995f8e11533448e8bd7eae4ffb6 61 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.164 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18005 241e7995f8e11533448e8bd7eae4ffb6 61 Pfam PF00831 Ribosomal L29 protein 4 57 4.1E-21 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18005 241e7995f8e11533448e8bd7eae4ffb6 61 Gene3D G3DSA:1.10.287.310 1 57 3.7E-22 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18005 241e7995f8e11533448e8bd7eae4ffb6 61 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 55 1.6E-20 T 11-11-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS01660 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS13555 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS02495 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS14420 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS09970 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS04855 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS11530 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS05530 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS08375 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS12385 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS04815 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS03610 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS07705 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS05870 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS16705 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS08300 a932bc9969fe5f66f8acead6482aaf57 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 SUPERFAMILY SSF52821 4 105 2.23E-22 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 Pfam PF00581 Rhodanese-like domain 17 98 1.3E-7 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 Gene3D G3DSA:3.40.50.720 115 360 3.5E-78 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 SMART SM00450 6 102 7.3E-11 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 Gene3D G3DSA:3.40.250.10 4 105 5.6E-21 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 SUPERFAMILY SSF69572 114 362 5.36E-96 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ATY42_RS12450 6e3008c7e7917e48d30e05a683a3b5de 379 Pfam PF00899 ThiF family 119 356 2.3E-71 T 11-11-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ATY42_RS15235 cff84a7e136e33eb403aec794f91ccba 240 Pfam PF13672 Protein phosphatase 2C 18 195 1.0E-13 T 11-11-2016 ATY42_RS15235 cff84a7e136e33eb403aec794f91ccba 240 SUPERFAMILY SSF81606 8 233 5.89E-47 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS15235 cff84a7e136e33eb403aec794f91ccba 240 SMART SM00332 2 231 4.2E-15 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS15235 cff84a7e136e33eb403aec794f91ccba 240 SMART SM00331 11 233 3.4E-6 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS15235 cff84a7e136e33eb403aec794f91ccba 240 Gene3D G3DSA:3.60.40.10 6 233 5.7E-48 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 SUPERFAMILY SSF51395 13 323 8.24E-71 T 11-11-2016 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 324 7.3E-120 T 11-11-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 Gene3D G3DSA:3.20.20.70 13 256 1.4E-74 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 8 327 48.5 T 11-11-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 95 113 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 PIRSF PIRSF006621 4 327 9.1E-77 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATY42_RS01920 9b180ff5b284b0239daa41c3d08e98a0 334 Pfam PF01207 Dihydrouridine synthase (Dus) 16 318 3.2E-77 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATY42_RS01405 3d923b137b09c7f19c83e8f5725c81c6 264 Pfam PF00005 ABC transporter 24 171 1.2E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS01405 3d923b137b09c7f19c83e8f5725c81c6 264 SMART SM00382 33 229 4.7E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS01405 3d923b137b09c7f19c83e8f5725c81c6 264 SUPERFAMILY SSF52540 7 234 2.61E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01405 3d923b137b09c7f19c83e8f5725c81c6 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS01405 3d923b137b09c7f19c83e8f5725c81c6 264 Gene3D G3DSA:3.40.50.300 6 235 4.3E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13345 a7acaee72eb3aba60c28d28b90c6f009 180 Pfam PF00665 Integrase core domain 37 129 9.1E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS13345 a7acaee72eb3aba60c28d28b90c6f009 180 Gene3D G3DSA:3.30.420.10 27 170 7.4E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13345 a7acaee72eb3aba60c28d28b90c6f009 180 SUPERFAMILY SSF53098 25 170 4.05E-23 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06125 b5ed818d3ed53b0f2d8bfb537c7f9ed2 360 SUPERFAMILY SSF81324 6 143 1.96E-8 T 11-11-2016 ATY42_RS06125 b5ed818d3ed53b0f2d8bfb537c7f9ed2 360 SUPERFAMILY SSF51735 121 231 3.64E-6 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS06125 b5ed818d3ed53b0f2d8bfb537c7f9ed2 360 Pfam PF07885 Ion channel 48 97 4.4E-6 T 11-11-2016 IPR013099 Potassium channel domain ATY42_RS06125 b5ed818d3ed53b0f2d8bfb537c7f9ed2 360 Gene3D G3DSA:3.40.50.720 117 229 1.6E-11 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS06125 b5ed818d3ed53b0f2d8bfb537c7f9ed2 360 Gene3D G3DSA:1.10.287.70 6 95 7.1E-7 T 11-11-2016 ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Pfam PF13188 PAS domain 148 200 5.0E-4 T 11-11-2016 IPR000014 PAS domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 248 3.5E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Pfam PF00563 EAL domain 447 679 6.4E-54 T 11-11-2016 IPR001633 EAL domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Gene3D G3DSA:3.30.450.20 132 251 8.4E-12 T 11-11-2016 ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Gene3D G3DSA:3.40.50.2300 9 120 3.7E-4 T 11-11-2016 ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 SMART SM00052 441 685 1.9E-29 T 11-11-2016 IPR001633 EAL domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 SMART SM00267 258 429 2.0E-7 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 SUPERFAMILY SSF55073 275 431 1.1E-20 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 SUPERFAMILY SSF52172 9 154 5.89E-6 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 SUPERFAMILY SSF55785 132 251 3.24E-12 T 11-11-2016 IPR000014 PAS domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 267 427 1.0E-15 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Gene3D G3DSA:3.30.70.270 271 435 1.2E-24 T 11-11-2016 ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Gene3D G3DSA:3.20.20.450 445 681 2.8E-53 T 11-11-2016 IPR001633 EAL domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 Pfam PF00990 Diguanylate cyclase, GGDEF domain 271 418 9.9E-17 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS13490 eb5aa057fbb14116f0319ac6e4979567 689 SUPERFAMILY SSF141868 447 680 1.18E-48 T 11-11-2016 IPR001633 EAL domain ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 7.8E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 7.8E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 7.8E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PIRSF PIRSF006431 1 313 3.6E-139 T 11-11-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.2E-13 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 1.2E-13 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 1.2E-13 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 1.1E-151 T 11-11-2016 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 Gene3D G3DSA:3.40.50.1820 7 307 2.5E-73 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 SUPERFAMILY SSF53474 3 310 1.76E-66 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS18345 028fd6ca9b10d1fe799f0724f2a225f4 313 Pfam PF00561 alpha/beta hydrolase fold 35 298 1.5E-31 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Hamap MF_01884 Transcription termination factor Rho [rho]. 211 629 227.992 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Gene3D G3DSA:2.40.50.140 261 327 1.7E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Gene3D G3DSA:3.40.50.300 344 628 2.1E-104 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 SMART SM00959 215 258 1.2E-11 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 SUPERFAMILY SSF68912 212 257 8.24E-7 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 SUPERFAMILY SSF52540 301 582 2.09E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 TIGRFAM TIGR00767 rho: transcription termination factor Rho 212 628 2.1E-205 T 11-11-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Pfam PF07497 Rho termination factor, RNA-binding domain 263 335 1.1E-27 T 11-11-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 SUPERFAMILY SSF50249 261 334 3.31E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 SMART SM00357 263 329 6.8E-15 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Pfam PF07498 Rho termination factor, N-terminal domain 215 258 5.9E-13 T 11-11-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 371 574 1.0E-21 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 Gene3D G3DSA:1.10.720.10 211 258 1.0E-15 T 11-11-2016 ATY42_RS21605 7bf46f98720cd89c032b588ddf6585e6 629 SMART SM00382 381 561 9.2E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12270 83f23f8335abb426b541b3c0b78ea873 457 SUPERFAMILY SSF53098 286 421 3.11E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12270 83f23f8335abb426b541b3c0b78ea873 457 SUPERFAMILY SSF53098 26 257 3.11E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12270 83f23f8335abb426b541b3c0b78ea873 457 Pfam PF13546 DDE superfamily endonuclease 36 309 1.5E-88 T 11-11-2016 ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 Gene3D G3DSA:3.40.630.40 329 425 8.0E-58 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 Gene3D G3DSA:3.40.630.40 473 548 8.0E-58 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 SUPERFAMILY SSF53187 472 548 7.85E-53 T 11-11-2016 ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 SUPERFAMILY SSF53187 329 424 7.85E-53 T 11-11-2016 ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 SMART SM00646 390 545 9.1E-65 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 Pfam PF11741 AMIN domain 45 123 4.3E-13 T 11-11-2016 IPR021731 AMIN domain ATY42_RS13530 6f68fdb2524cb585f148cc3073b0da13 577 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 330 545 9.5E-50 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS22355 954dc9d539c710df342f028026a89754 318 Gene3D G3DSA:3.30.420.10 165 307 1.9E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22355 954dc9d539c710df342f028026a89754 318 Pfam PF00665 Integrase core domain 175 267 3.1E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS22355 954dc9d539c710df342f028026a89754 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.5E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS22355 954dc9d539c710df342f028026a89754 318 SUPERFAMILY SSF53098 165 308 7.59E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 Gene3D G3DSA:3.90.25.10 182 316 3.7E-27 T 11-11-2016 ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 Gene3D G3DSA:3.40.50.720 1 181 5.5E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 PRINTS PR01713 Nucleotide sugar epimerase signature 214 229 9.1E-23 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 9.1E-23 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 PRINTS PR01713 Nucleotide sugar epimerase signature 279 296 9.1E-23 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 PRINTS PR01713 Nucleotide sugar epimerase signature 240 255 9.1E-23 T 11-11-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 SUPERFAMILY SSF51735 1 316 1.21E-90 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02370 7fa84926b0d628a44e15f94b26b06595 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 246 8.4E-59 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 Gene3D G3DSA:3.30.360.10 146 320 4.2E-82 T 11-11-2016 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 143 324 3.5E-60 T 11-11-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 SUPERFAMILY SSF51735 8 161 1.58E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 SMART SM00859 9 124 1.1E-46 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 SUPERFAMILY SSF55347 133 325 8.33E-75 T 11-11-2016 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 7 338 38.186 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 PIRSF PIRSF000148 7 341 2.9E-134 T 11-11-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 338 2.6E-136 T 11-11-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 123 6.0E-33 T 11-11-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ATY42_RS16380 69418c295d59c2cd6200d612f256a80c 341 Gene3D G3DSA:3.40.50.720 6 145 7.5E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Gene3D G3DSA:1.10.486.10 382 526 7.3E-36 T 11-11-2016 ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Gene3D G3DSA:1.10.10.160 109 179 3.1E-15 T 11-11-2016 IPR013986 DExx box DNA helicase domain ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Pfam PF13361 UvrD-like helicase C-terminal domain 269 603 1.4E-59 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 658 36.46 T 11-11-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Gene3D G3DSA:3.40.50.300 180 277 6.3E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Gene3D G3DSA:3.40.50.300 3 105 6.3E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 263 9.6E-68 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Gene3D G3DSA:3.40.50.300 278 381 1.3E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 Gene3D G3DSA:3.40.50.300 540 628 1.3E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01065 a866e0d3d5c4bad54e062fbc2f782977 658 SUPERFAMILY SSF52540 2 628 8.87E-159 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SUPERFAMILY SSF48452 11 372 5.43E-30 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SMART SM00028 237 270 39.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SMART SM00028 32 65 52.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SMART SM00028 66 99 81.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SMART SM00028 100 133 43.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SMART SM00028 134 167 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 SMART SM00028 168 201 0.065 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 Gene3D G3DSA:1.25.40.10 10 217 4.2E-34 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 Pfam PF13432 Tetratricopeptide repeat 209 270 2.1E-7 T 11-11-2016 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 Pfam PF13432 Tetratricopeptide repeat 105 168 5.8E-5 T 11-11-2016 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 Pfam PF13432 Tetratricopeptide repeat 38 96 0.014 T 11-11-2016 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 Gene3D G3DSA:1.25.40.10 218 300 6.7E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS22575 62130b49ef6bc7679346f42b462a34b4 690 Gene3D G3DSA:1.25.40.10 333 368 6.7E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 SUPERFAMILY SSF50156 221 306 4.6E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 SUPERFAMILY SSF50156 89 179 4.73E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 Pfam PF02163 Peptidase family M50 11 432 1.2E-77 T 11-11-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 Gene3D G3DSA:2.30.42.10 95 180 3.6E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 12 445 2.2E-99 T 11-11-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 SMART SM00228 211 279 3.0E-4 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 SMART SM00228 107 185 2.0 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09565 961a62ae392aeda976d8cbb6c3509113 448 Gene3D G3DSA:2.30.42.10 223 293 1.0E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Pfam PF00873 AcrB/AcrD/AcrF family 4 1051 4.0E-297 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82693 136 180 6.54E-22 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82693 266 322 6.54E-22 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:1.20.1640.10 284 492 2.2E-56 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:3.30.70.1430 40 139 1.6E-26 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:1.10.3850.10 838 1053 1.5E-54 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82714 181 265 4.19E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:3.30.2090.10 817 830 3.8E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:3.30.2090.10 181 263 5.7E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:3.30.2090.10 709 779 3.8E-12 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82693 40 131 7.15E-21 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82866 289 489 5.36E-48 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 Gene3D G3DSA:3.30.70.1430 562 651 2.9E-7 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82714 710 780 3.53E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82693 559 655 1.44E-12 T 11-11-2016 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 546 563 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 436 459 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 613 627 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 PRINTS PR00702 Acriflavin resistance protein family signature 461 484 8.3E-73 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21090 7f061c99abaf74e499959658dbb70843 1082 SUPERFAMILY SSF82866 831 1053 2.22E-44 T 11-11-2016 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SMART SM00387 896 1010 2.1E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:3.30.565.10 850 1010 2.5E-46 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SUPERFAMILY SSF63829 41 297 1.21E-22 T 11-11-2016 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:2.120.10.30 307 360 2.2E-13 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:2.120.10.30 46 135 1.3E-8 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:2.120.10.30 379 484 1.2E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:2.120.10.30 485 578 1.9E-6 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:2.120.10.30 145 249 2.2E-13 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SUPERFAMILY SSF52172 1030 1153 2.85E-33 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SUPERFAMILY SSF55874 838 1010 2.1E-44 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SMART SM00388 784 849 3.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SUPERFAMILY SSF63829 388 590 5.01E-17 T 11-11-2016 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Pfam PF00072 Response regulator receiver domain 1033 1142 1.5E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SUPERFAMILY SSF63829 278 399 2.55E-8 T 11-11-2016 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:1.10.287.130 778 845 5.7E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Pfam PF00512 His Kinase A (phospho-acceptor) domain 784 849 1.3E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Pfam PF07495 Y_Y_Y domain 668 727 2.2E-13 T 11-11-2016 IPR011123 Two component regulator three Y ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SMART SM00448 1031 1142 4.8E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 934 948 8.1E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 994 1007 8.1E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 970 988 8.1E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 PRINTS PR00344 Bacterial sensor protein C-terminal signature 952 962 8.1E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Pfam PF07494 Two component regulator propeller 98 119 8.1E-4 T 11-11-2016 IPR011110 Two component regulator propeller ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Pfam PF07494 Two component regulator propeller 10 33 7.0E-5 T 11-11-2016 IPR011110 Two component regulator propeller ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 SUPERFAMILY SSF47384 773 850 5.49E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Gene3D G3DSA:3.40.50.2300 1028 1151 4.7E-32 T 11-11-2016 ATY42_RS08875 c20f6743d8c197439fd580179a736142 1155 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 896 1008 6.8E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19855 aecef4404fe8f06077e2a927a2de6581 467 SUPERFAMILY SSF51690 171 464 1.06E-46 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ATY42_RS19855 aecef4404fe8f06077e2a927a2de6581 467 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 172 410 1.6E-67 T 11-11-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ATY42_RS19855 aecef4404fe8f06077e2a927a2de6581 467 PIRSF PIRSF005943 1 467 2.1E-196 T 11-11-2016 IPR016471 Nicotinamide phosphoribosyl transferase Reactome: R-HSA-1368108|Reactome: R-HSA-197264 ATY42_RS19855 aecef4404fe8f06077e2a927a2de6581 467 Gene3D G3DSA:3.20.140.10 6 385 7.1E-8 T 11-11-2016 ATY42_RS02795 b7194faf86480a859927757447bc6a72 378 SUPERFAMILY SSF54106 30 78 1.31E-7 T 11-11-2016 IPR018392 LysM domain ATY42_RS02795 b7194faf86480a859927757447bc6a72 378 Pfam PF01476 LysM domain 32 77 1.2E-13 T 11-11-2016 IPR018392 LysM domain ATY42_RS02795 b7194faf86480a859927757447bc6a72 378 Gene3D G3DSA:3.10.350.10 30 78 4.7E-9 T 11-11-2016 IPR018392 LysM domain ATY42_RS02795 b7194faf86480a859927757447bc6a72 378 SMART SM00257 31 79 8.5E-7 T 11-11-2016 IPR018392 LysM domain ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 Gene3D G3DSA:1.10.240.10 228 322 1.2E-25 T 11-11-2016 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 Gene3D G3DSA:3.10.290.10 332 399 2.8E-20 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 SUPERFAMILY SSF55174 332 399 2.35E-14 T 11-11-2016 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 400 45.427 T 11-11-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 SUPERFAMILY SSF52374 4 314 1.58E-86 T 11-11-2016 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 7.2E-25 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 7.2E-25 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 7.2E-25 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 7.2E-25 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 Pfam PF00579 tRNA synthetases class I (W and Y) 33 312 8.7E-71 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 9 399 2.8E-108 T 11-11-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ATY42_RS02425 08be0fe93ea93fc0bb1571de3f261c61 403 Gene3D G3DSA:3.40.50.620 10 227 2.9E-84 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS10240 54eb0991fc9736730332d6014c9ffbb6 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS10240 54eb0991fc9736730332d6014c9ffbb6 338 SMART SM01126 154 299 2.9E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10240 54eb0991fc9736730332d6014c9ffbb6 338 Pfam PF12762 ISXO2-like transposase domain 154 299 1.5E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02025 9285f6c222ced5edb64265b6725bc407 314 SUPERFAMILY SSF56281 8 267 3.28E-48 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS02025 9285f6c222ced5edb64265b6725bc407 314 Gene3D G3DSA:3.60.15.10 11 251 1.1E-37 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS02025 9285f6c222ced5edb64265b6725bc407 314 Pfam PF00753 Metallo-beta-lactamase superfamily 24 197 8.6E-23 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS02025 9285f6c222ced5edb64265b6725bc407 314 SMART SM00849 21 226 4.2E-25 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.2E-17 T 11-11-2016 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Pfam PF01330 RuvA N terminal domain 1 62 2.1E-19 T 11-11-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 193 4.8E-48 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Gene3D G3DSA:1.10.150.20 68 136 1.1E-28 T 11-11-2016 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 SUPERFAMILY SSF46929 147 191 2.62E-7 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Gene3D G3DSA:2.40.50.140 1 64 2.0E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 30.006 T 11-11-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 SMART SM00278 108 127 0.089 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 SMART SM00278 73 92 8.8 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Gene3D G3DSA:1.10.8.10 148 190 1.7E-12 T 11-11-2016 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 Pfam PF07499 RuvA, C-terminal domain 149 191 2.3E-7 T 11-11-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 SUPERFAMILY SSF47781 66 134 1.71E-20 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS08200 b1188607fd956ca8a68f971e0625154d 194 SUPERFAMILY SSF50249 1 63 1.48E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 SUPERFAMILY SSF46785 10 124 4.0E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 17 74 7.8E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 Gene3D G3DSA:3.40.190.10 104 196 1.3E-19 T 11-11-2016 ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 Gene3D G3DSA:1.10.10.10 15 99 6.9E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 Pfam PF03466 LysR substrate binding domain 104 309 1.4E-32 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 52 1.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 63 1.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 42 1.3E-5 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 Gene3D G3DSA:3.40.190.10 197 276 1.5E-12 T 11-11-2016 ATY42_RS14540 c67dbcd6a79db3041d5e5e1bc00bbe40 323 SUPERFAMILY SSF53850 107 314 1.71E-34 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 22 5.3E-7 T 11-11-2016 IPR024973 ESPR domain ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 994 1153 6.41E-27 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF03895 YadA-like C-terminal region 1189 1265 8.5E-11 T 11-11-2016 IPR005594 YadA-like, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 64 201 6.8E-24 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 393 518 2.62E-30 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:3.30.1300.30 1149 1265 8.3E-11 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 729 904 1.31E-27 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 611 723 1.19E-14 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF54523 1143 1265 3.14E-13 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05658 Head domain of trimeric autotransporter adhesin 105 131 3.9E-5 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05658 Head domain of trimeric autotransporter adhesin 423 449 1.2E-5 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05658 Head domain of trimeric autotransporter adhesin 832 857 4.6E-4 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05658 Head domain of trimeric autotransporter adhesin 731 757 1.4E-4 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05658 Head domain of trimeric autotransporter adhesin 395 419 2.6E-4 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05658 Head domain of trimeric autotransporter adhesin 451 477 3.1E-8 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 223 335 8.7E-12 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 64 200 7.9E-26 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 982 1148 9.6E-30 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 524 641 6.0E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 336 519 1.6E-43 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 730 904 1.5E-32 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Gene3D G3DSA:2.150.10.10 642 722 2.2E-13 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 303 379 8.89E-6 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 528 640 3.66E-14 T 11-11-2016 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 1131 1151 8.0E-7 T 11-11-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 176 196 4.0E-8 T 11-11-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 879 902 6.7E-8 T 11-11-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 494 514 1.4E-8 T 11-11-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS04050 24b5bb12a91d702692330f935686496a 1265 SUPERFAMILY SSF101967 219 315 2.22E-10 T 11-11-2016 ATY42_RS11590 44816e5b3b5aca8a4535dfbc62cd173b 150 Gene3D G3DSA:1.20.1050.10 22 134 3.3E-23 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS11590 44816e5b3b5aca8a4535dfbc62cd173b 150 SUPERFAMILY SSF47616 21 149 1.71E-22 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS11590 44816e5b3b5aca8a4535dfbc62cd173b 150 Pfam PF13410 Glutathione S-transferase, C-terminal domain 69 125 4.3E-7 T 11-11-2016 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 Gene3D G3DSA:2.30.40.10 4 77 4.9E-11 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 Gene3D G3DSA:3.20.20.140 78 346 1.4E-39 T 11-11-2016 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 Gene3D G3DSA:2.30.40.10 347 398 2.1E-7 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 SUPERFAMILY SSF51556 64 361 1.31E-82 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 TIGRFAM TIGR01224 hutI: imidazolonepropionase 26 399 6.7E-138 T 11-11-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 Pfam PF07969 Amidohydrolase family 112 378 7.9E-13 T 11-11-2016 IPR013108 Amidohydrolase 3 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 SUPERFAMILY SSF51338 363 400 9.43E-31 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 SUPERFAMILY SSF51338 2 64 9.43E-31 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS11900 e5c9362ee3430cf86294386ca2d2973e 401 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 401 41.27 T 11-11-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS02565 34f2eb42203ed2c3c245945ce2ba1dcd 397 SUPERFAMILY SSF52540 1 363 2.0E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02565 34f2eb42203ed2c3c245945ce2ba1dcd 397 Gene3D G3DSA:3.40.50.300 230 365 1.1E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02565 34f2eb42203ed2c3c245945ce2ba1dcd 397 Gene3D G3DSA:3.40.50.300 1 189 1.1E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS02565 34f2eb42203ed2c3c245945ce2ba1dcd 397 PIRSF PIRSF029347 1 378 8.6E-38 T 11-11-2016 IPR014555 RecF-like ATY42_RS02565 34f2eb42203ed2c3c245945ce2ba1dcd 397 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 25 344 4.8E-28 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS14585 f3e9d6238f81ebe986f73ec93a2b803c 116 Pfam PF06877 Regulator of ribonuclease activity B 9 113 1.9E-19 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain ATY42_RS14585 f3e9d6238f81ebe986f73ec93a2b803c 116 SUPERFAMILY SSF89946 22 110 8.89E-6 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain ATY42_RS14585 f3e9d6238f81ebe986f73ec93a2b803c 116 Gene3D G3DSA:3.30.70.970 26 110 1.3E-5 T 11-11-2016 IPR009671 Regulator of ribonuclease activity B domain ATY42_RS23235 6f3f39c01ef0679c698cbbb8027a5636 436 Gene3D G3DSA:1.20.1250.20 244 428 2.4E-25 T 11-11-2016 ATY42_RS23235 6f3f39c01ef0679c698cbbb8027a5636 436 SUPERFAMILY SSF103473 15 429 2.09E-82 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS23235 6f3f39c01ef0679c698cbbb8027a5636 436 Gene3D G3DSA:1.20.1250.20 18 223 6.4E-43 T 11-11-2016 ATY42_RS23235 6f3f39c01ef0679c698cbbb8027a5636 436 Pfam PF07690 Major Facilitator Superfamily 29 395 3.8E-43 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS21995 e55a5124735592eaffff7e855961cd8e 536 Gene3D G3DSA:3.90.226.10 277 531 2.1E-92 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS21995 e55a5124735592eaffff7e855961cd8e 536 Gene3D G3DSA:3.90.226.10 33 270 1.6E-78 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS21995 e55a5124735592eaffff7e855961cd8e 536 SUPERFAMILY SSF52096 277 536 1.32E-85 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS21995 e55a5124735592eaffff7e855961cd8e 536 SUPERFAMILY SSF52096 23 270 9.81E-72 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS21995 e55a5124735592eaffff7e855961cd8e 536 Pfam PF01039 Carboxyl transferase domain 48 526 5.2E-147 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS06550 f792aec6b066bba84da1ec89e42f6667 328 SUPERFAMILY SSF53098 7 292 3.11E-24 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06550 f792aec6b066bba84da1ec89e42f6667 328 Pfam PF13546 DDE superfamily endonuclease 2 180 3.5E-59 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Gene3D G3DSA:1.10.3850.10 280 498 7.7E-57 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Gene3D G3DSA:1.10.3850.10 815 1029 2.3E-56 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Gene3D G3DSA:3.30.70.1430 38 139 5.2E-33 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Gene3D G3DSA:3.30.70.1430 565 664 2.4E-31 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82866 296 497 2.49E-46 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82714 716 809 5.1E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82866 832 1028 1.57E-45 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 617 631 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.6E-99 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Gene3D G3DSA:3.30.2090.10 716 811 1.6E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Gene3D G3DSA:3.30.2090.10 181 275 8.8E-28 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82693 38 132 5.23E-27 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82693 135 182 4.88E-21 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82693 274 330 4.88E-21 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82693 563 664 8.89E-28 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82693 809 858 8.37E-26 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82693 665 715 8.37E-26 T 11-11-2016 ATY42_RS13900 55414a2a017d34b7db0134a51ca8939c 1056 SUPERFAMILY SSF82714 182 271 3.4E-22 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS22185 7460b0ca80798e408aaf203cd00248a5 301 Pfam PF04381 Putative exonuclease, RdgC 1 296 1.7E-98 T 11-11-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 ATY42_RS22185 7460b0ca80798e408aaf203cd00248a5 301 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 300 40.119 T 11-11-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 Gene3D G3DSA:3.40.50.300 266 464 3.0E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 SUPERFAMILY SSF50249 16 184 2.4E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 Pfam PF00270 DEAD/DEAH box helicase 284 442 6.3E-16 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 SUPERFAMILY SSF52540 463 678 1.25E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 Pfam PF00271 Helicase conserved C-terminal domain 533 612 4.5E-18 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 Gene3D G3DSA:3.40.50.300 465 662 2.3E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 Pfam PF17191 RecG wedge domain 24 180 2.7E-10 T 11-11-2016 IPR033454 RecG, wedge domain ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 37 686 7.0E-214 T 11-11-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 SUPERFAMILY SSF52540 192 464 1.22E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 Gene3D G3DSA:2.40.50.140 55 149 1.1E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 SMART SM00487 276 470 1.3E-29 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS05610 3343bc891a8d0f97f519697ede306e92 717 SMART SM00490 529 613 8.2E-22 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 322 7.9E-105 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 Gene3D G3DSA:3.90.650.10 142 322 1.5E-44 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 SUPERFAMILY SSF55326 3 135 7.85E-32 T 11-11-2016 ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 305 6.1E-11 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 135 3.7E-22 T 11-11-2016 IPR016188 PurM-like, N-terminal domain ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 PIRSF PIRSF005303 1 322 4.3E-82 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 319 28.986 T 11-11-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 SUPERFAMILY SSF56042 140 308 7.48E-36 T 11-11-2016 IPR010918 AIR synthase-related protein, C-terminal domain ATY42_RS19385 44dd52cc00dec909d0443d3fdab8f019 324 Gene3D G3DSA:3.30.1330.10 1 137 3.0E-43 T 11-11-2016 IPR016188 PurM-like, N-terminal domain ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 TIGRFAM TIGR00086 smpB: SsrA-binding protein 19 160 1.7E-51 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 ProSitePatterns PS01317 SsrA-binding protein. 37 49 - T 11-11-2016 IPR020081 SsrA-binding protein, conserved site ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 SUPERFAMILY SSF74982 14 143 7.98E-48 T 11-11-2016 IPR023620 Small protein B ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 Hamap MF_00023 SsrA-binding protein [smpB]. 1 166 67.908 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 Gene3D G3DSA:2.40.280.10 17 138 8.2E-47 T 11-11-2016 IPR023620 Small protein B ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 Pfam PF01668 SmpB protein 18 81 2.6E-26 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 ATY42_RS09815 5cf204eef1f0242951bbf09749a7be0f 167 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 19 143 2.0E-67 T 11-11-2016 IPR000037 SsrA-binding protein GO:0003723 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 99 726 44.656 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 SUPERFAMILY SSF51011 622 725 2.88E-33 T 11-11-2016 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 SMART SM00642 250 618 8.8E-7 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 107 723 1.8E-275 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Pfam PF00128 Alpha amylase, catalytic domain 265 345 2.8E-9 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 PIRSF PIRSF000463 10 726 2.7E-288 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Gene3D G3DSA:2.60.40.10 111 220 8.5E-37 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Gene3D G3DSA:2.60.40.10 16 103 1.3E-15 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 SUPERFAMILY SSF51445 168 615 2.26E-113 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Gene3D G3DSA:3.20.20.80 245 609 8.8E-91 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 123 206 1.4E-22 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 627 724 5.0E-24 T 11-11-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 SUPERFAMILY SSF81296 18 111 6.77E-17 T 11-11-2016 IPR014756 Immunoglobulin E-set ATY42_RS00850 22e5df44493b777442e6da12c20777a9 727 Gene3D G3DSA:2.60.40.1180 622 725 6.7E-35 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 Gene3D G3DSA:3.40.190.10 181 244 4.5E-6 T 11-11-2016 ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 8.0E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 SUPERFAMILY SSF46785 5 115 3.74E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 Pfam PF03466 LysR substrate binding domain 92 283 1.9E-21 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 Gene3D G3DSA:3.40.190.10 95 180 1.5E-15 T 11-11-2016 ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 Gene3D G3DSA:1.10.10.10 6 88 4.5E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01840 e59cd172d988f60c77f40e1f51df0671 304 SUPERFAMILY SSF53850 93 284 4.16E-26 T 11-11-2016 ATY42_RS13760 aa2512ed955d80b76624432ee196537b 276 Gene3D G3DSA:1.10.3720.10 23 263 3.0E-52 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS13760 aa2512ed955d80b76624432ee196537b 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 263 2.1E-16 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS13760 aa2512ed955d80b76624432ee196537b 276 SUPERFAMILY SSF161098 22 260 2.35E-49 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS02780 578164f63832d837168addb58e530e70 240 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 2.8E-11 T 11-11-2016 IPR025640 Domain of unknown function DUF4339 ATY42_RS02780 578164f63832d837168addb58e530e70 240 SUPERFAMILY SSF54523 126 239 9.94E-23 T 11-11-2016 ATY42_RS02780 578164f63832d837168addb58e530e70 240 Gene3D G3DSA:3.30.700.10 110 240 4.0E-23 T 11-11-2016 ATY42_RS02780 578164f63832d837168addb58e530e70 240 Pfam PF00114 Pilin (bacterial filament) 134 239 3.6E-15 T 11-11-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 ATY42_RS02780 578164f63832d837168addb58e530e70 240 Gene3D G3DSA:3.30.1490.40 3 56 8.7E-4 T 11-11-2016 IPR003169 GYF domain GO:0005515 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 Hamap MF_00577 Urocanate hydratase [hutU]. 3 554 49.879 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 ProSitePatterns PS01233 Urocanase signature. 440 455 - T 11-11-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 PIRSF PIRSF001423 1 554 3.4E-287 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 Pfam PF01175 Urocanase 10 545 1.1E-257 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 Gene3D G3DSA:3.40.1770.10 358 551 1.3E-160 T 11-11-2016 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 Gene3D G3DSA:3.40.1770.10 7 139 1.3E-160 T 11-11-2016 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 Gene3D G3DSA:3.40.50.10730 141 347 1.4E-90 T 11-11-2016 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 SUPERFAMILY SSF111326 4 552 1.7E-257 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11915 07cbf996f088bc01bce8b9ea48a99df5 555 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 551 5.3E-285 T 11-11-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 Pfam PF01047 MarR family 52 111 1.6E-13 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 SMART SM00347 45 147 1.3E-22 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 SUPERFAMILY SSF46785 22 160 3.84E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 Gene3D G3DSA:1.10.10.10 24 162 8.2E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 1.8E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 1.8E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.8E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS11645 c4c5482a22db72949f4d57daffa2cf7e 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 1.8E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Gene3D G3DSA:1.10.8.210 150 208 2.0E-11 T 11-11-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 3.4E-67 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Gene3D G3DSA:3.40.1010.10 216 321 7.3E-16 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 SUPERFAMILY SSF75615 114 206 7.19E-25 T 11-11-2016 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 221 308 2.6E-10 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 SUPERFAMILY SSF51735 1 111 3.94E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 2.7E-15 T 11-11-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 SUPERFAMILY SSF53790 216 321 7.85E-15 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Gene3D G3DSA:3.40.50.720 1 110 3.5E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Gene3D G3DSA:3.30.160.110 113 147 3.2E-18 T 11-11-2016 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 9.9E-9 T 11-11-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS15545 ed4d7af953d67d76a1f4d0b8245fb96d 325 Pfam PF13241 Putative NAD(P)-binding 6 115 2.8E-24 T 11-11-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS21865 61b7d053678af1d8f4bd3975cbc0bff1 270 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 192 208 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ATY42_RS21865 61b7d053678af1d8f4bd3975cbc0bff1 270 PIRSF PIRSF005902 1 264 1.8E-72 T 11-11-2016 IPR001130 TatD family GO:0016788 ATY42_RS21865 61b7d053678af1d8f4bd3975cbc0bff1 270 Gene3D G3DSA:3.20.20.140 1 261 6.1E-87 T 11-11-2016 ATY42_RS21865 61b7d053678af1d8f4bd3975cbc0bff1 270 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ATY42_RS21865 61b7d053678af1d8f4bd3975cbc0bff1 270 SUPERFAMILY SSF51556 3 261 6.81E-82 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS21865 61b7d053678af1d8f4bd3975cbc0bff1 270 Pfam PF01026 TatD related DNase 4 259 1.8E-70 T 11-11-2016 IPR001130 TatD family GO:0016788 ATY42_RS18850 d7900f5461b2b1dfe9251d403a9d4282 302 PRINTS PR01270 Histone deacetylase superfamily signature 151 166 9.6E-16 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATY42_RS18850 d7900f5461b2b1dfe9251d403a9d4282 302 PRINTS PR01270 Histone deacetylase superfamily signature 117 140 9.6E-16 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATY42_RS18850 d7900f5461b2b1dfe9251d403a9d4282 302 PRINTS PR01270 Histone deacetylase superfamily signature 231 241 9.6E-16 T 11-11-2016 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATY42_RS18850 d7900f5461b2b1dfe9251d403a9d4282 302 Gene3D G3DSA:3.40.800.20 2 301 6.0E-96 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATY42_RS18850 d7900f5461b2b1dfe9251d403a9d4282 302 SUPERFAMILY SSF52768 1 301 4.56E-96 T 11-11-2016 ATY42_RS18850 d7900f5461b2b1dfe9251d403a9d4282 302 Pfam PF00850 Histone deacetylase domain 18 301 2.5E-75 T 11-11-2016 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 340 3.8E-137 T 11-11-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 SUPERFAMILY SSF50129 9 140 1.4E-31 T 11-11-2016 IPR011032 GroES-like ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 Pfam PF13602 Zinc-binding dehydrogenase 195 337 1.2E-20 T 11-11-2016 ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 91 9.0E-9 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 Gene3D G3DSA:3.40.50.720 161 257 1.3E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 Gene3D G3DSA:3.90.180.10 1 160 2.8E-35 T 11-11-2016 IPR011032 GroES-like ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 SMART SM00829 16 337 2.3E-12 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS18615 7bcfc1bc59c6c6a9cee7091246069655 340 SUPERFAMILY SSF51735 118 289 1.25E-35 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02490 9ecb181890208a7d38ee720f47ab6915 69 Pfam PF04519 Polymer-forming cytoskeletal 1 36 3.0E-6 T 11-11-2016 IPR007607 Protein of unknown function DUF583 ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 Gene3D G3DSA:1.20.1560.10 20 334 3.8E-74 T 11-11-2016 ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 TIGRFAM TIGR02204 MsbA_rel: ABC transporter, permease/ATP-binding protein 14 586 7.0E-260 T 11-11-2016 IPR011918 ABC transporter, ATP-binding/permease protein ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 Gene3D G3DSA:3.40.50.300 347 579 2.3E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 SUPERFAMILY SSF90123 19 334 1.96E-72 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 SMART SM00382 375 561 3.1E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 SUPERFAMILY SSF52540 340 586 4.79E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 Pfam PF00005 ABC transporter 366 515 1.4E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS09895 d84cb0032801db9e1bc5da0b90360f28 589 Pfam PF00664 ABC transporter transmembrane region 34 296 1.0E-47 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Gene3D G3DSA:3.30.1490.70 206 236 3.4E-21 T 11-11-2016 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Gene3D G3DSA:3.30.1490.70 365 408 3.4E-21 T 11-11-2016 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Pfam PF04675 DNA ligase N terminus 3 166 5.0E-22 T 11-11-2016 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Pfam PF01068 ATP dependent DNA ligase domain 212 408 3.4E-33 T 11-11-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Pfam PF04679 ATP dependent DNA ligase C terminal region 429 518 3.0E-7 T 11-11-2016 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 2 532 3.4E-184 T 11-11-2016 IPR026333 ATP-dependent DNA ligase, PP_1105 family ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 SUPERFAMILY SSF50249 413 532 5.48E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 SUPERFAMILY SSF56091 206 408 1.58E-53 T 11-11-2016 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Gene3D G3DSA:3.30.470.30 237 353 2.9E-27 T 11-11-2016 ATY42_RS09090 dc203f508cdea035bfdfb1bb144952ae 534 Gene3D G3DSA:2.40.50.140 413 533 6.2E-30 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 SUPERFAMILY SSF56935 700 744 6.59E-86 T 11-11-2016 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 SUPERFAMILY SSF56935 302 353 6.59E-86 T 11-11-2016 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 SUPERFAMILY SSF56935 786 969 6.59E-86 T 11-11-2016 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 SUPERFAMILY SSF56935 388 637 6.59E-86 T 11-11-2016 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 SUPERFAMILY SSF56935 35 229 6.59E-86 T 11-11-2016 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Pfam PF00593 TonB dependent receptor 609 967 7.5E-23 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 952 969 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Gene3D G3DSA:2.40.170.20 301 348 4.2E-68 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Gene3D G3DSA:2.40.170.20 483 643 4.2E-68 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Gene3D G3DSA:2.40.170.20 174 241 4.2E-68 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Gene3D G3DSA:2.40.170.20 396 437 4.2E-68 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Gene3D G3DSA:2.40.170.20 702 969 4.2E-68 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 167 2.1E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS08775 c0482f4b1ace0e1c85b99b3ab73dd777 969 Gene3D G3DSA:2.170.130.10 35 173 7.2E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1104 1116 - T 11-11-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1380 0.0 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 14 1383 12.252 T 11-11-2016 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:2.40.50.150 857 966 6.6E-56 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:2.40.50.150 1086 1100 6.6E-56 T 11-11-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF00562 RNA polymerase Rpb2, domain 6 747 1306 2.4E-158 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF04563 RNA polymerase beta subunit 28 527 1.4E-40 T 11-11-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF04565 RNA polymerase Rpb2, domain 3 541 608 3.5E-29 T 11-11-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:2.40.270.10 822 849 1.6E-86 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:2.40.270.10 1101 1284 1.6E-86 T 11-11-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:3.90.1100.10 21 156 7.0E-146 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:3.90.1100.10 687 741 7.0E-146 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:3.90.1100.10 473 619 7.0E-146 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:2.30.150.10 620 684 1.3E-24 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF04560 RNA polymerase Rpb2, domain 7 1308 1382 1.7E-26 T 11-11-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:2.40.50.100 743 821 1.6E-28 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 SUPERFAMILY SSF64484 1080 1381 0.0 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 SUPERFAMILY SSF64484 13 231 0.0 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 SUPERFAMILY SSF64484 349 968 0.0 T 11-11-2016 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF10385 RNA polymerase beta subunit external 1 domain 619 684 5.9E-22 T 11-11-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:3.90.1110.10 352 472 2.5E-63 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Gene3D G3DSA:3.90.1110.10 158 235 2.5E-63 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 362 418 5.7E-5 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 157 227 1.0E-7 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18080 bfe833ca9dd6742b45bc505a00d56fba 1383 Pfam PF04561 RNA polymerase Rpb2, domain 2 449 482 4.7E-6 T 11-11-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS10650 29969bcf56ad0bca899e19b9b462095f 297 Gene3D G3DSA:3.90.550.10 6 277 1.1E-67 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS10650 29969bcf56ad0bca899e19b9b462095f 297 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 5 267 4.2E-107 T 11-11-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 ATY42_RS10650 29969bcf56ad0bca899e19b9b462095f 297 Pfam PF00483 Nucleotidyl transferase 12 268 2.0E-31 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATY42_RS10650 29969bcf56ad0bca899e19b9b462095f 297 SUPERFAMILY SSF53448 5 279 5.63E-63 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS07755 8af1a83fd6827bf89e510f30e6e83a65 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 195 26.688 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 ATY42_RS07755 8af1a83fd6827bf89e510f30e6e83a65 202 SUPERFAMILY SSF52540 1 187 1.16E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07755 8af1a83fd6827bf89e510f30e6e83a65 202 Pfam PF01121 Dephospho-CoA kinase 5 182 5.4E-58 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 ATY42_RS07755 8af1a83fd6827bf89e510f30e6e83a65 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 187 3.4E-49 T 11-11-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24 ATY42_RS07755 8af1a83fd6827bf89e510f30e6e83a65 202 Gene3D G3DSA:3.40.50.300 4 198 2.6E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00715 0aa625d54e5d83d5a942b1fdd4cb09f6 220 Pfam PF03006 Haemolysin-III related 22 207 5.5E-24 T 11-11-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 Gene3D G3DSA:3.40.50.920 541 666 1.1E-49 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 336 4.1E-154 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 Pfam PF02780 Transketolase, C-terminal domain 553 659 9.5E-18 T 11-11-2016 IPR033248 Transketolase, C-terminal domain ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 Pfam PF02779 Transketolase, pyrimidine binding domain 356 528 1.3E-42 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 SUPERFAMILY SSF52518 348 529 4.42E-63 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 666 9.8E-285 T 11-11-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 Gene3D G3DSA:3.40.50.970 330 537 5.6E-73 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 SUPERFAMILY SSF52518 6 329 9.63E-121 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 Gene3D G3DSA:3.40.50.970 6 320 1.4E-129 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 SUPERFAMILY SSF52922 536 666 1.18E-42 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 ProSitePatterns PS00802 Transketolase signature 2. 470 486 - T 11-11-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS05730 ff8821ec9160ee40591cb73c4b5eacc9 666 SMART SM00861 357 529 1.4E-62 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS04800 1fd7e911d4a2aebd6f218a3dd2bac5a4 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04800 1fd7e911d4a2aebd6f218a3dd2bac5a4 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.6E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS04800 1fd7e911d4a2aebd6f218a3dd2bac5a4 332 SMART SM01126 148 293 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 PRINTS PR00397 Sirohaem Fe-binding site signature 468 486 1.4E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 PRINTS PR00397 Sirohaem Fe-binding site signature 420 438 1.4E-8 T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 SUPERFAMILY SSF56014 419 553 4.84E-33 T 11-11-2016 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 468 484 - T 11-11-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 421 550 0.052 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 316 7.9E-41 T 11-11-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Gene3D G3DSA:3.90.480.10 330 409 6.1E-57 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Gene3D G3DSA:3.90.480.10 61 132 6.1E-57 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 SUPERFAMILY SSF55124 334 410 1.05E-17 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 1 566 55.71 T 11-11-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 SUPERFAMILY SSF56014 135 332 1.31E-53 T 11-11-2016 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 6 551 2.1E-266 T 11-11-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Gene3D G3DSA:3.30.413.10 422 550 2.4E-34 T 11-11-2016 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Gene3D G3DSA:3.30.413.10 135 327 2.0E-61 T 11-11-2016 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 SUPERFAMILY SSF55124 4 134 4.42E-30 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 63 125 3.9E-16 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS17020 4c29a054b4235699ae3b39558f9a1cfb 568 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 340 405 3.7E-14 T 11-11-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 SUPERFAMILY SSF53901 3 251 4.61E-77 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 SUPERFAMILY SSF53901 213 410 2.88E-73 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 409 5.7E-197 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 PIRSF PIRSF000447 1 411 3.8E-183 T 11-11-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 Gene3D G3DSA:3.40.47.10 7 259 1.2E-75 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 SMART SM00825 Beta-ketoacyl synthase 5 411 2.9E-15 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 Gene3D G3DSA:3.40.47.10 262 410 7.0E-63 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.3E-58 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal ATY42_RS04260 f14a7e8df0c08011c9aa884b34574050 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 3.7E-38 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 Gene3D G3DSA:3.60.15.10 534 750 1.3E-29 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 Pfam PF13567 Domain of unknown function (DUF4131) 29 204 5.5E-23 T 11-11-2016 IPR025405 Domain of unknown function DUF4131 ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 Pfam PF03772 Competence protein 244 511 1.8E-58 T 11-11-2016 IPR004477 ComEC/Rec2-related protein ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 SMART SM00849 548 733 3.5E-10 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 266 442 6.3E-25 T 11-11-2016 IPR004477 ComEC/Rec2-related protein ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 Pfam PF00753 Metallo-beta-lactamase superfamily 545 760 3.4E-11 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 162 762 3.2E-99 T 11-11-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 ATY42_RS11390 d853d129743c1fe7f22d2440eed038db 802 SUPERFAMILY SSF56281 538 774 3.8E-42 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 312 328 1.0E-17 T 11-11-2016 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 1.0E-17 T 11-11-2016 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 312 1.0E-17 T 11-11-2016 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 1.0E-17 T 11-11-2016 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 SUPERFAMILY SSF51905 283 391 3.37E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 SUPERFAMILY SSF51905 12 179 3.37E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 Pfam PF01494 FAD binding domain 11 333 2.0E-22 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 6 445 27.324 T 11-11-2016 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|Reactome: R-HSA-71240 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 Gene3D G3DSA:3.50.50.60 12 184 1.0E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS12055 939f4bfad7a9218f39518b794814e0ba 455 Gene3D G3DSA:3.50.50.60 284 363 1.0E-32 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Pfam PF00270 DEAD/DEAH box helicase 84 233 9.4E-8 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 SMART SM00490 316 416 3.1E-14 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 SUPERFAMILY SSF52540 77 613 2.48E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Pfam PF00271 Helicase conserved C-terminal domain 294 415 1.7E-9 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Pfam PF04408 Helicase associated domain (HA2) 479 544 3.7E-16 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 657 778 3.1E-20 T 11-11-2016 IPR011709 Domain of unknown function DUF1605 ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Gene3D G3DSA:3.40.50.300 287 428 1.1E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Gene3D G3DSA:3.40.50.300 76 234 3.9E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 SMART SM00487 75 259 3.1E-28 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 Pfam PF11898 Domain of unknown function (DUF3418) 793 1369 3.0E-173 T 11-11-2016 IPR024590 RNA helicase HrpA, C-terminal ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 SMART SM00382 92 382 1.9E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 SMART SM00847 476 566 4.2E-32 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 ATY42_RS08345 bf3ccc8242b697a4c8bd4b59529a81a7 1373 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 48 621 7.9E-268 T 11-11-2016 IPR010222 RNA helicase HrpA GO:0004004 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 Gene3D G3DSA:3.40.50.261 122 288 7.4E-75 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 238 251 - T 11-11-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 SUPERFAMILY SSF52210 125 290 3.53E-56 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 SUPERFAMILY SSF51735 1 124 1.02E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 PIRSF PIRSF001553 1 291 5.9E-131 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 Pfam PF02629 CoA binding domain 6 99 1.4E-31 T 11-11-2016 IPR003781 CoA-binding GO:0048037 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 9.0E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 PRINTS PR01798 Succinyl-CoA synthase signature 242 259 9.0E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 PRINTS PR01798 Succinyl-CoA synthase signature 179 197 9.0E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 PRINTS PR01798 Succinyl-CoA synthase signature 210 223 9.0E-37 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 Pfam PF00549 CoA-ligase 153 273 6.6E-19 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 Gene3D G3DSA:3.40.50.720 2 121 1.2E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 SMART SM00881 4 100 5.0E-38 T 11-11-2016 IPR003781 CoA-binding GO:0048037 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 154 183 - T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS07825 6daa88f5faa9e6907725148b3f59572f 291 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 4.0E-139 T 11-11-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 21 31 1.9E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 31 41 1.9E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 SUPERFAMILY SSF53822 80 350 2.2E-60 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 Pfam PF13377 Periplasmic binding protein-like domain 188 347 2.6E-35 T 11-11-2016 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 ProSitePatterns PS00356 LacI-type HTH domain signature. 22 40 - T 11-11-2016 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 66 1.7E-18 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 Gene3D G3DSA:3.40.50.2300 194 325 7.5E-47 T 11-11-2016 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 SMART SM00354 19 89 1.1E-23 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 Gene3D G3DSA:1.10.260.40 20 71 5.4E-23 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 SUPERFAMILY SSF47413 19 77 2.53E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS00830 af8c22a6b9bc1233ed6e525d30ea5a2e 352 Gene3D G3DSA:3.40.50.2300 72 193 1.4E-18 T 11-11-2016 ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 PIRSF PIRSF006281 1 526 1.1E-208 T 11-11-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 Gene3D G3DSA:2.60.40.10 414 529 3.6E-36 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 43 522 2.4E-195 T 11-11-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 SUPERFAMILY SSF81296 414 524 5.32E-28 T 11-11-2016 IPR014756 Immunoglobulin E-set ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 SUPERFAMILY SSF74650 43 412 5.65E-156 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 Gene3D G3DSA:2.70.98.10 42 413 7.3E-166 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 ATY42_RS01050 707b714a858abe53b02bac714b94761f 532 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 532 62.383 T 11-11-2016 IPR023724 Glucan biosynthesis, MdoD ATY42_RS06195 ad8ca3f23a9b874e5bedd4f66b705b94 334 Pfam PF12706 Beta-lactamase superfamily domain 88 300 3.5E-20 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS06195 ad8ca3f23a9b874e5bedd4f66b705b94 334 SUPERFAMILY SSF56281 59 333 4.33E-48 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS06195 ad8ca3f23a9b874e5bedd4f66b705b94 334 SMART SM00849 76 277 0.0062 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS06195 ad8ca3f23a9b874e5bedd4f66b705b94 334 Gene3D G3DSA:3.60.15.10 58 334 1.8E-53 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Gene3D G3DSA:3.40.50.2300 4 117 2.5E-19 T 11-11-2016 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 390 407 4.6E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 407 426 4.6E-6 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 SUPERFAMILY SSF46689 375 422 5.26E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Pfam PF00072 Response regulator receiver domain 8 112 2.1E-15 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Gene3D G3DSA:1.10.8.60 297 371 2.4E-12 T 11-11-2016 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 SUPERFAMILY SSF52172 1 172 4.7E-26 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 SUPERFAMILY SSF52540 126 367 4.75E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Gene3D G3DSA:1.10.10.60 379 421 5.2E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Gene3D G3DSA:3.40.50.300 126 296 4.0E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 151 164 - T 11-11-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 SMART SM00448 4 114 7.2E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Pfam PF00158 Sigma-54 interaction domain 127 291 2.9E-60 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 Pfam PF02954 Bacterial regulatory protein, Fis family 384 421 2.3E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS03090 25e562192f397183e06a56528a1b2b03 426 SMART SM00382 147 287 1.4E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 SUPERFAMILY SSF52540 186 511 2.82E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 SMART SM01086 806 898 5.8E-13 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Pfam PF07724 AAA domain (Cdc48 subfamily) 633 799 3.7E-39 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 13 890 0.0 T 11-11-2016 IPR017729 Type VI secretion system, ATPase ClpV1 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 730 3.4E-31 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 683 701 3.4E-31 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 638 656 3.4E-31 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 745 759 3.4E-31 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Gene3D G3DSA:1.10.8.60 818 893 2.9E-11 T 11-11-2016 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 806 882 1.5E-12 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Gene3D G3DSA:3.40.50.300 600 817 1.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Gene3D G3DSA:1.10.8.60 367 450 5.2E-29 T 11-11-2016 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 316 328 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 225 336 4.1E-8 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 668 686 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 SMART SM00382 634 776 1.6E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 SMART SM00382 220 365 6.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 SUPERFAMILY SSF52540 583 879 5.9E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 SUPERFAMILY SSF81923 12 131 3.14E-16 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Gene3D G3DSA:3.40.50.300 186 364 2.0E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15290 876448cf8f2638662e864f58f3413e60 901 Gene3D G3DSA:1.10.1780.10 10 134 1.5E-16 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 1.1E-71 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 PIRSF PIRSF000124 1 443 6.4E-155 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 Gene3D G3DSA:1.20.5.100 207 234 4.5E-19 T 11-11-2016 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 SUPERFAMILY SSF48179 204 298 8.28E-34 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 SUPERFAMILY SSF51735 1 194 8.83E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 424 8.4E-143 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 Gene3D G3DSA:3.40.50.720 235 447 8.9E-75 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 4.6E-39 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 428 6.2E-33 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 SUPERFAMILY SSF52413 316 439 2.35E-39 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 PIRSF PIRSF500134 1 446 1.7E-191 T 11-11-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346 ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 Gene3D G3DSA:3.40.50.720 1 206 1.7E-80 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10040 a5f77f7d33b2917d23ccb860a811ff5f 449 SMART SM00984 324 428 7.0E-53 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS08145 61271af69c446b849d0e9044be78e0eb 308 Pfam PF05506 Domain of unknown function (DUF756) 104 188 7.3E-17 T 11-11-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 ATY42_RS08145 61271af69c446b849d0e9044be78e0eb 308 Pfam PF05506 Domain of unknown function (DUF756) 205 267 5.0E-9 T 11-11-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 ATY42_RS08145 61271af69c446b849d0e9044be78e0eb 308 Pfam PF04185 Phosphoesterase family 1 34 6.6E-11 T 11-11-2016 IPR007312 Phosphoesterase GO:0016788 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 Gene3D G3DSA:3.10.50.30 81 156 3.2E-29 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 4.9E-31 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 4 154 1.5E-57 T 11-11-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 SUPERFAMILY SSF54534 82 156 2.09E-22 T 11-11-2016 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 2.2E-26 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 PIRSF PIRSF006092 1 158 2.9E-50 T 11-11-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 16 47 - T 11-11-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 Gene3D G3DSA:1.10.287.180 3 74 9.2E-34 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 1 155 33.085 T 11-11-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ATY42_RS14390 acb2d73c5358fd4bbb289c7b270cff49 158 SUPERFAMILY SSF46557 4 77 6.54E-28 T 11-11-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 SMART SM00937 13 123 1.7E-54 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 Pfam PF03462 PCRF domain 15 148 7.0E-47 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 Pfam PF00472 RF-1 domain 157 265 7.2E-39 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 Gene3D G3DSA:1.20.58.410 4 44 3.0E-4 T 11-11-2016 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 6 291 8.5E-138 T 11-11-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 SUPERFAMILY SSF75620 7 291 1.31E-119 T 11-11-2016 ATY42_RS14350 60908f347bfd4bee0b01f826c5b5e63c 302 Gene3D G3DSA:3.30.160.20 156 232 2.7E-37 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain ATY42_RS06665 489405ff235a92ac16139ad29d598e7c 398 Pfam PF07690 Major Facilitator Superfamily 21 269 1.4E-16 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS06665 489405ff235a92ac16139ad29d598e7c 398 Gene3D G3DSA:1.20.1250.20 214 390 1.0E-11 T 11-11-2016 ATY42_RS06665 489405ff235a92ac16139ad29d598e7c 398 SUPERFAMILY SSF103473 3 389 1.96E-35 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS06665 489405ff235a92ac16139ad29d598e7c 398 Gene3D G3DSA:1.20.1250.20 5 183 1.1E-20 T 11-11-2016 ATY42_RS02555 f037f845e6f41ee78a5b0c4151827087 737 Pfam PF13515 Fusaric acid resistance protein-like 414 534 2.0E-21 T 11-11-2016 ATY42_RS02555 f037f845e6f41ee78a5b0c4151827087 737 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 13 716 5.4E-206 T 11-11-2016 IPR010019 Integral membrane protein, YccS ATY42_RS02555 f037f845e6f41ee78a5b0c4151827087 737 Pfam PF12805 FUSC-like inner membrane protein yccS 71 357 7.2E-101 T 11-11-2016 IPR032692 Integral membrane protein YccS, N-terminal ATY42_RS02555 f037f845e6f41ee78a5b0c4151827087 737 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 716 4.2E-227 T 11-11-2016 IPR010020 Integral membrane protein, YccS/YhfK ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 SUPERFAMILY SSF52374 4 295 2.41E-105 T 11-11-2016 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 305 1.6E-100 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Gene3D G3DSA:3.40.50.620 3 67 4.4E-51 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Gene3D G3DSA:3.40.50.620 181 230 4.4E-51 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Gene3D G3DSA:1.10.10.350 364 461 4.6E-26 T 11-11-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Gene3D G3DSA:1.10.1160.10 233 313 3.0E-31 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 459 5.9E-167 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-24 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Gene3D G3DSA:3.90.800.10 68 180 6.0E-33 T 11-11-2016 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 32.387 T 11-11-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATY42_RS07380 75947d414a4163d310a7b7ef3a1db127 467 SUPERFAMILY SSF48163 299 461 1.57E-35 T 11-11-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 Gene3D G3DSA:3.50.50.60 11 112 1.7E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 Gene3D G3DSA:3.50.50.60 113 334 5.4E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 2.2E-5 T 11-11-2016 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 2.2E-5 T 11-11-2016 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.2E-5 T 11-11-2016 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 SUPERFAMILY SSF51905 10 217 3.18E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 SUPERFAMILY SSF51905 161 340 3.78E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 7.3E-8 T 11-11-2016 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 7.3E-8 T 11-11-2016 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 7.3E-8 T 11-11-2016 ATY42_RS21560 846eae18579581459e4e6b322d81fd9f 430 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 327 3.8E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 Gene3D G3DSA:2.40.50.230 428 515 1.9E-26 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 SUPERFAMILY SSF69255 422 515 2.88E-22 T 11-11-2016 ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 31 566 2.0E-95 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 SUPERFAMILY SSF69279 27 206 2.89E-49 T 11-11-2016 ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 545 652 2.1E-35 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 682 825 1.0E-38 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 SUPERFAMILY SSF69279 219 360 6.12E-8 T 11-11-2016 ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 32 572 2.3E-75 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 Gene3D G3DSA:3.55.50.10 107 210 8.7E-28 T 11-11-2016 ATY42_RS05040 61a69948c89ad6ad4aa5e78db4a2b0c9 907 Pfam PF05954 Phage late control gene D protein (GPD) 41 361 3.2E-72 T 11-11-2016 ATY42_RS08860 683df54fbcee97e843ae3c5376f519c0 220 SUPERFAMILY SSF101874 24 193 2.09E-47 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS08860 683df54fbcee97e843ae3c5376f519c0 220 Pfam PF04264 YceI-like domain 27 190 3.9E-37 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS08860 683df54fbcee97e843ae3c5376f519c0 220 SMART SM00867 26 191 1.6E-52 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS08860 683df54fbcee97e843ae3c5376f519c0 220 Gene3D G3DSA:2.40.128.110 26 196 7.6E-52 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 265 280 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 154 165 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 286 303 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 248 263 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 25 41 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 120 132 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 191 218 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 PRINTS PR00992 Alanine racemase signature 60 78 9.8E-60 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 SUPERFAMILY SSF51419 8 233 1.96E-69 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 SUPERFAMILY SSF50621 226 356 6.98E-44 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 Gene3D G3DSA:3.20.20.10 10 211 4.0E-67 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 Hamap MF_01201 Alanine racemase. 1 355 34.429 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 11-11-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 TIGRFAM TIGR00492 alr: alanine racemase 2 355 2.4E-105 T 11-11-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 Pfam PF01168 Alanine racemase, N-terminal domain 8 218 3.0E-65 T 11-11-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 3.8E-35 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 Gene3D G3DSA:2.40.37.10 212 355 1.1E-52 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS03330 16b85ef1c6eb45478fdacf73e546f90b 366 SMART SM01005 232 355 7.2E-60 T 11-11-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ATY42_RS20230 10e04fd61dd96184f8a1f1c86ef1a92c 261 Gene3D G3DSA:3.20.20.410 9 256 5.7E-56 T 11-11-2016 IPR002763 Protein of unknown function DUF72 ATY42_RS20230 10e04fd61dd96184f8a1f1c86ef1a92c 261 Pfam PF01904 Protein of unknown function DUF72 34 250 5.5E-44 T 11-11-2016 IPR002763 Protein of unknown function DUF72 ATY42_RS20230 10e04fd61dd96184f8a1f1c86ef1a92c 261 SUPERFAMILY SSF117396 11 254 4.05E-58 T 11-11-2016 IPR002763 Protein of unknown function DUF72 ATY42_RS16065 3b99d2ae19359bad553b2a2cd41b2353 1327 Pfam PF05567 Neisseria PilC beta-propeller domain 774 1152 1.0E-31 T 11-11-2016 IPR008707 PilC beta-propeller domain ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SUPERFAMILY SSF69705 1 130 1.07E-36 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Gene3D G3DSA:3.30.1480.10 1 128 6.4E-42 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SUPERFAMILY SSF50249 135 203 7.8E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 347 6.0E-125 T 11-11-2016 IPR010213 Transcription termination factor NusA GO:0003723 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Gene3D G3DSA:1.10.150.20 360 424 1.4E-20 T 11-11-2016 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Gene3D G3DSA:1.10.150.20 433 493 2.8E-15 T 11-11-2016 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SUPERFAMILY SSF54814 205 282 1.18E-28 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 444 494 4.8E-17 T 11-11-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 369 418 2.2E-22 T 11-11-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Gene3D G3DSA:2.40.50.140 133 202 2.7E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Pfam PF13184 NusA-like KH domain 234 301 1.9E-27 T 11-11-2016 IPR025249 KH domain, NusA-like GO:0003723 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Pfam PF00575 S1 RNA binding domain 135 199 1.5E-7 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SUPERFAMILY SSF54814 283 346 8.5E-15 T 11-11-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SMART SM00322 305 368 0.014 T 11-11-2016 IPR004087 K Homology domain GO:0003676 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SMART SM00322 234 297 21.0 T 11-11-2016 IPR004087 K Homology domain GO:0003676 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Pfam PF14520 Helix-hairpin-helix domain 436 492 4.0E-7 T 11-11-2016 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Gene3D G3DSA:3.30.300.20 282 350 1.4E-27 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SMART SM00316 137 204 5.5E-8 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Gene3D G3DSA:3.30.300.20 203 281 4.3E-33 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SUPERFAMILY SSF47794 360 419 8.32E-16 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Pfam PF08529 NusA N-terminal domain 4 128 3.9E-36 T 11-11-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 SUPERFAMILY SSF47794 433 493 1.88E-9 T 11-11-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 ATY42_RS16175 4db8ea446747f59b4ffe12bbdd6b7c50 503 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 414 29.343 T 11-11-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ATY42_RS00480 762a70f54262e3faeed6d27cdbdb4834 317 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 240 309 6.7E-12 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) ATY42_RS00480 762a70f54262e3faeed6d27cdbdb4834 317 SUPERFAMILY SSF101801 237 312 8.37E-13 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) ATY42_RS00480 762a70f54262e3faeed6d27cdbdb4834 317 Gene3D G3DSA:2.30.330.10 235 311 6.6E-13 T 11-11-2016 ATY42_RS00480 762a70f54262e3faeed6d27cdbdb4834 317 TIGRFAM TIGR02551 SpaO_YscQ: type III secretion apparatus protein, YscQ/HrcQ family 37 309 1.5E-52 T 11-11-2016 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO GO:0030254 ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 Gene3D G3DSA:3.40.50.300 196 468 2.3E-109 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 Gene3D G3DSA:1.10.860.10 33 135 3.8E-38 T 11-11-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 Pfam PF03796 DnaB-like helicase C terminal domain 211 466 4.8E-119 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 33 468 1.1E-177 T 11-11-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 SUPERFAMILY SSF48024 31 142 9.68E-39 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 Pfam PF00772 DnaB-like helicase N terminal domain 33 134 2.1E-36 T 11-11-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 SUPERFAMILY SSF52540 209 280 1.81E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07485 a3560f65d68c0dec3fe3ee293eaea198 476 SUPERFAMILY SSF52540 307 459 1.81E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16555 cfabe87edf0d49db2d761aafd5237762 86 Gene3D G3DSA:1.10.287.1040 14 80 5.1E-26 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS16555 cfabe87edf0d49db2d761aafd5237762 86 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 28 56 4.0E-10 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS16555 cfabe87edf0d49db2d761aafd5237762 86 Pfam PF02609 Exonuclease VII small subunit 15 65 1.8E-19 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS16555 cfabe87edf0d49db2d761aafd5237762 86 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 14 74 15.826 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS16555 cfabe87edf0d49db2d761aafd5237762 86 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 15 68 2.5E-22 T 11-11-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS16555 cfabe87edf0d49db2d761aafd5237762 86 SUPERFAMILY SSF116842 13 72 1.83E-18 T 11-11-2016 ATY42_RS08420 c5e8e23144b89ce42c50bbf5172eb5c1 700 Pfam PF13692 Glycosyl transferases group 1 527 665 4.9E-26 T 11-11-2016 ATY42_RS08420 c5e8e23144b89ce42c50bbf5172eb5c1 700 SUPERFAMILY SSF53756 353 696 9.42E-23 T 11-11-2016 ATY42_RS08420 c5e8e23144b89ce42c50bbf5172eb5c1 700 Pfam PF00535 Glycosyl transferase family 2 75 198 8.2E-28 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS08420 c5e8e23144b89ce42c50bbf5172eb5c1 700 SUPERFAMILY SSF53448 61 316 1.64E-54 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS08420 c5e8e23144b89ce42c50bbf5172eb5c1 700 Gene3D G3DSA:3.90.550.10 72 319 1.4E-55 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Gene3D G3DSA:1.10.238.10 97 159 1.9E-9 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Pfam PF13202 EF hand 141 159 5.0E-6 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Pfam PF13202 EF hand 60 76 2.3E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Pfam PF13202 EF hand 114 128 4.2E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Pfam PF13202 EF hand 88 104 2.3E-4 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Pfam PF13202 EF hand 37 50 0.0016 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 ProSitePatterns PS00018 EF-hand calcium-binding domain. 147 159 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 SUPERFAMILY SSF47473 60 160 2.72E-16 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS07920 df6ac4b6c1f3017fe8ec9639fa15ee26 193 Gene3D G3DSA:1.10.238.10 37 96 7.2E-8 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS00880 a40e04bbb89d1fdc42b1a18011978cd9 331 Pfam PF00872 Transposase, Mutator family 2 305 1.4E-95 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS00880 a40e04bbb89d1fdc42b1a18011978cd9 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.40.170.20 644 674 1.2E-57 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.40.170.20 523 575 1.2E-57 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.40.170.20 423 476 1.2E-57 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.40.170.20 742 1033 1.2E-57 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.40.170.20 179 261 1.2E-57 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.40.170.20 305 355 1.2E-57 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 SUPERFAMILY SSF56935 742 780 4.68E-50 T 11-11-2016 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 SUPERFAMILY SSF56935 809 1033 4.68E-50 T 11-11-2016 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 SUPERFAMILY SSF56935 420 687 4.68E-50 T 11-11-2016 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 52 1033 7.2E-255 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 179 6.3E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 SUPERFAMILY SSF56935 47 423 8.35E-37 T 11-11-2016 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Gene3D G3DSA:2.170.130.10 55 178 1.3E-18 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14090 19b80445a067e0006861c60a95acbc13 1033 Pfam PF00593 TonB dependent receptor 749 1032 1.6E-32 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS13265 615dcb15f2f164213f7dc115b3826d31 353 SMART SM00245 121 307 3.7E-9 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ATY42_RS13265 615dcb15f2f164213f7dc115b3826d31 353 SUPERFAMILY SSF52096 53 321 2.32E-52 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS13265 615dcb15f2f164213f7dc115b3826d31 353 Pfam PF03572 Peptidase family S41 164 306 9.4E-18 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ATY42_RS13265 615dcb15f2f164213f7dc115b3826d31 353 Gene3D G3DSA:3.90.226.10 164 317 1.2E-28 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02345 47d4a2cb55fdc00fc11d477ac04a879a 155 SUPERFAMILY SSF51283 9 154 1.07E-48 T 11-11-2016 IPR029054 dUTPase-like ATY42_RS02345 47d4a2cb55fdc00fc11d477ac04a879a 155 TIGRFAM TIGR00576 dut: dUTP diphosphatase 21 153 3.0E-44 T 11-11-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 ATY42_RS02345 47d4a2cb55fdc00fc11d477ac04a879a 155 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 10 154 32.705 T 11-11-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|Reactome: R-HSA-500753 ATY42_RS02345 47d4a2cb55fdc00fc11d477ac04a879a 155 Pfam PF00692 dUTPase 21 153 2.3E-33 T 11-11-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 ATY42_RS02345 47d4a2cb55fdc00fc11d477ac04a879a 155 Gene3D G3DSA:2.70.40.10 10 154 3.6E-48 T 11-11-2016 IPR029054 dUTPase-like ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 804 964 3.7E-43 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 Gene3D G3DSA:2.120.10.30 230 327 5.7E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 SUPERFAMILY SSF63829 180 241 2.03E-6 T 11-11-2016 ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 SUPERFAMILY SSF63829 63 126 2.03E-6 T 11-11-2016 ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 Gene3D G3DSA:3.30.70.270 808 968 1.1E-47 T 11-11-2016 ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 SUPERFAMILY SSF63829 273 496 7.85E-11 T 11-11-2016 ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 Gene3D G3DSA:2.120.10.30 343 536 9.6E-9 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 SUPERFAMILY SSF55073 811 965 1.18E-40 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 Pfam PF07495 Y_Y_Y domain 675 737 2.2E-10 T 11-11-2016 IPR011123 Two component regulator three Y ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 Pfam PF00990 Diguanylate cyclase, GGDEF domain 806 962 1.2E-42 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12965 61e172eb202826f38059043f36c0a46f 973 SMART SM00267 795 966 4.5E-56 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Gene3D G3DSA:2.170.190.11 44 132 1.1E-24 T 11-11-2016 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Gene3D G3DSA:2.40.340.10 334 396 1.9E-6 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Gene3D G3DSA:3.40.980.10 164 333 2.3E-46 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Gene3D G3DSA:3.90.105.10 133 163 1.9E-15 T 11-11-2016 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Pfam PF00994 Probable molybdopterin binding domain 182 321 2.0E-24 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 256 290 - T 11-11-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 SUPERFAMILY SSF63867 332 405 2.35E-7 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 SMART SM00852 181 322 7.7E-27 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 168 7.0E-32 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 SUPERFAMILY SSF53218 178 326 4.97E-32 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 SUPERFAMILY SSF63882 1 177 4.97E-45 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS15575 95433359c22c361cf9b16262dfdec998 417 Pfam PF03454 MoeA C-terminal region (domain IV) 334 395 3.1E-5 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS22130 3012d79f912a880376645ef8718a360c 250 Gene3D G3DSA:3.40.50.880 25 220 4.3E-48 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS22130 3012d79f912a880376645ef8718a360c 250 Pfam PF00117 Glutamine amidotransferase class-I 54 193 2.1E-20 T 11-11-2016 IPR017926 Glutamine amidotransferase ATY42_RS22130 3012d79f912a880376645ef8718a360c 250 SUPERFAMILY SSF52317 35 205 4.19E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS06540 371c75aea1332bb0efa46b51e086a5b1 135 SMART SM00363 11 73 0.0023 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS06540 371c75aea1332bb0efa46b51e086a5b1 135 Pfam PF01479 S4 domain 11 56 3.0E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS06540 371c75aea1332bb0efa46b51e086a5b1 135 SUPERFAMILY SSF55174 8 105 2.09E-23 T 11-11-2016 ATY42_RS06540 371c75aea1332bb0efa46b51e086a5b1 135 Gene3D G3DSA:3.10.290.10 7 103 4.6E-29 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS19115 4052f6fc44565b90b5aa93bab70b8e29 261 Gene3D G3DSA:3.40.50.150 202 231 2.4E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19115 4052f6fc44565b90b5aa93bab70b8e29 261 Gene3D G3DSA:3.40.50.150 6 163 2.4E-29 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19115 4052f6fc44565b90b5aa93bab70b8e29 261 Pfam PF13649 Methyltransferase domain 46 137 2.8E-13 T 11-11-2016 ATY42_RS19115 4052f6fc44565b90b5aa93bab70b8e29 261 SUPERFAMILY SSF53335 9 241 1.82E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 PIRSF PIRSF016262 16 230 1.8E-60 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 83 98 - T 11-11-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 SUPERFAMILY SSF55681 17 218 2.4E-70 T 11-11-2016 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 87 140 8.0E-25 T 11-11-2016 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 Gene3D G3DSA:3.90.1550.10 19 216 2.0E-74 T 11-11-2016 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 Pfam PF03099 Biotin/lipoate A/B protein ligase family 73 171 7.9E-9 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 Hamap MF_00013 Octanoyltransferase [lipB]. 17 218 38.697 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS19880 261e275143276e88d542f5384d95dd23 232 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 39 213 6.2E-65 T 11-11-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 PIRSF PIRSF002155 1 227 8.7E-71 T 11-11-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 Pfam PF00687 Ribosomal protein L1p/L10e family 29 220 8.0E-46 T 11-11-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 Gene3D G3DSA:3.40.50.790 68 159 8.4E-35 T 11-11-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-11-2016 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 5.4E-100 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 Gene3D G3DSA:3.30.190.20 161 226 1.5E-44 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 Gene3D G3DSA:3.30.190.20 18 67 1.5E-44 T 11-11-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.395 T 11-11-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ATY42_RS18095 23525c3a52e71b7aacd6d8fa858af2d7 232 SUPERFAMILY SSF56808 5 225 1.7E-74 T 11-11-2016 IPR023674 Ribosomal protein L1-like ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 18 428 8.9E-121 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 ProSitePatterns PS00885 EPSP synthase signature 2. 345 363 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 14 433 31.832 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 Gene3D G3DSA:3.65.10.10 26 235 1.2E-59 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 PIRSF PIRSF000505 5 436 1.1E-116 T 11-11-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 ProSitePatterns PS00104 EPSP synthase signature 1. 93 107 - T 11-11-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 423 2.0E-115 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 Gene3D G3DSA:3.65.10.10 236 431 2.6E-51 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ATY42_RS11845 e364cd58d9466a30119d2d4c8409488d 440 SUPERFAMILY SSF55205 9 431 7.52E-124 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ATY42_RS12665 55ac931d7ef16f19f65a0e9cca02a787 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 102 4.7E-34 T 11-11-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 ATY42_RS12665 55ac931d7ef16f19f65a0e9cca02a787 106 Gene3D G3DSA:3.30.1390.10 9 106 8.8E-44 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATY42_RS12665 55ac931d7ef16f19f65a0e9cca02a787 106 SUPERFAMILY SSF54736 21 105 2.14E-32 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATY42_RS12665 55ac931d7ef16f19f65a0e9cca02a787 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 4 101 28.651 T 11-11-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS ATY42_RS05605 9375ab9899ed15d01cca631d3b4fabd8 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 124 3.2E-49 T 11-11-2016 IPR006056 RidA family ATY42_RS05605 9375ab9899ed15d01cca631d3b4fabd8 126 SUPERFAMILY SSF55298 2 125 1.02E-44 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS05605 9375ab9899ed15d01cca631d3b4fabd8 126 Gene3D G3DSA:3.30.1330.40 3 125 3.3E-49 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS05605 9375ab9899ed15d01cca631d3b4fabd8 126 Pfam PF01042 Endoribonuclease L-PSP 8 124 2.6E-40 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.4E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 9.4E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 9.4E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.4E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 9.4E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 9.4E-29 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 3.0E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 3.0E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 3.0E-6 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 250 4.7E-50 T 11-11-2016 ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 16 194 0.0036 T 11-11-2016 ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 Gene3D G3DSA:3.40.50.720 7 251 4.9E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12855 9cb1313560160451aed3b1ad497ae8d6 257 SUPERFAMILY SSF51735 11 251 1.26E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21460 6aca566df5de92a486077f8c21ff6391 306 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 46 295 2.0E-43 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region ATY42_RS21460 6aca566df5de92a486077f8c21ff6391 306 SUPERFAMILY SSF63829 15 304 4.14E-47 T 11-11-2016 ATY42_RS21460 6aca566df5de92a486077f8c21ff6391 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 240 257 1.2E-8 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS21460 6aca566df5de92a486077f8c21ff6391 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 47 64 1.2E-8 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS21460 6aca566df5de92a486077f8c21ff6391 306 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 176 198 1.2E-8 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS21460 6aca566df5de92a486077f8c21ff6391 306 Gene3D G3DSA:2.120.10.30 35 303 8.8E-55 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS15610 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13551 Winged helix-turn helix 19 82 3.0E-9 T 11-11-2016 ATY42_RS15610 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13592 Winged helix-turn helix 101 157 6.4E-21 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS15610 484e3c620efb0471e0336720c2b1e099 345 SUPERFAMILY SSF46689 7 133 1.43E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15610 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13358 DDE superfamily endonuclease 173 304 7.1E-33 T 11-11-2016 ATY42_RS17175 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13551 Winged helix-turn helix 19 82 3.0E-9 T 11-11-2016 ATY42_RS17175 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13592 Winged helix-turn helix 101 157 6.4E-21 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS17175 484e3c620efb0471e0336720c2b1e099 345 SUPERFAMILY SSF46689 7 133 1.43E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17175 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13358 DDE superfamily endonuclease 173 304 7.1E-33 T 11-11-2016 ATY42_RS03620 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13551 Winged helix-turn helix 19 82 3.0E-9 T 11-11-2016 ATY42_RS03620 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13592 Winged helix-turn helix 101 157 6.4E-21 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS03620 484e3c620efb0471e0336720c2b1e099 345 SUPERFAMILY SSF46689 7 133 1.43E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03620 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13358 DDE superfamily endonuclease 173 304 7.1E-33 T 11-11-2016 ATY42_RS19195 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13551 Winged helix-turn helix 19 82 3.0E-9 T 11-11-2016 ATY42_RS19195 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13592 Winged helix-turn helix 101 157 6.4E-21 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS19195 484e3c620efb0471e0336720c2b1e099 345 SUPERFAMILY SSF46689 7 133 1.43E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS19195 484e3c620efb0471e0336720c2b1e099 345 Pfam PF13358 DDE superfamily endonuclease 173 304 7.1E-33 T 11-11-2016 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 Gene3D G3DSA:2.30.30.40 96 148 4.6E-4 T 11-11-2016 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 Pfam PF01584 CheW-like domain 23 159 2.4E-32 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 SMART SM00260 18 157 3.5E-22 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 Gene3D G3DSA:3.40.50.2300 180 307 2.4E-23 T 11-11-2016 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 SUPERFAMILY SSF50341 18 160 2.62E-32 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 SUPERFAMILY SSF52172 181 308 1.18E-22 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 SMART SM00448 182 303 1.1E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 Pfam PF00072 Response regulator receiver domain 184 296 8.6E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12735 73104913f798b9a3d942aa092def64ef 314 PIRSF PIRSF002867 2 311 4.6E-98 T 11-11-2016 IPR024181 Chemotaxis response regulator CheV ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 196 536 1.8E-119 T 11-11-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 SUPERFAMILY SSF55545 58 195 3.4E-24 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 586 638 8.1E-14 T 11-11-2016 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 Gene3D G3DSA:3.20.20.80 194 604 4.3E-137 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 65 193 2.2E-19 T 11-11-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 Gene3D G3DSA:2.60.120.260 731 789 2.8E-4 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 500 516 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 190 207 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 518 535 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 286 303 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 153 173 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 219 240 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 334 352 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 PRINTS PR00738 Glycosyl hydrolase family 20 signature 356 369 3.8E-42 T 11-11-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 SUPERFAMILY SSF51445 196 549 6.32E-122 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS08655 ddbbd241bd4c7755bc3b37cb9a30558b 816 Gene3D G3DSA:3.30.379.10 53 193 9.1E-27 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS13295 dd11b45c6f715c5609be509f88b01302 130 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 30 105 4.7E-30 T 11-11-2016 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 ATY42_RS03905 7b9c22c1e25035c1a825dbfb4e48af30 153 SUPERFAMILY SSF81273 81 123 2.2E-13 T 11-11-2016 ATY42_RS03905 7b9c22c1e25035c1a825dbfb4e48af30 153 Gene3D G3DSA:4.10.430.10 82 123 9.1E-19 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ATY42_RS03905 7b9c22c1e25035c1a825dbfb4e48af30 153 Pfam PF00816 H-NS histone family 12 116 7.7E-23 T 11-11-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ATY42_RS03905 7b9c22c1e25035c1a825dbfb4e48af30 153 SMART SM00528 77 122 8.8E-17 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ATY42_RS07365 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS07365 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.4E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS07365 f2435a47a617bc75ad1d3005c3ccf5e1 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07365 f2435a47a617bc75ad1d3005c3ccf5e1 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19650 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS19650 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.4E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS19650 f2435a47a617bc75ad1d3005c3ccf5e1 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19650 f2435a47a617bc75ad1d3005c3ccf5e1 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21290 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS21290 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.4E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS21290 f2435a47a617bc75ad1d3005c3ccf5e1 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21290 f2435a47a617bc75ad1d3005c3ccf5e1 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00660 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS00660 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.4E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS00660 f2435a47a617bc75ad1d3005c3ccf5e1 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00660 f2435a47a617bc75ad1d3005c3ccf5e1 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11295 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS11295 f2435a47a617bc75ad1d3005c3ccf5e1 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.4E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS11295 f2435a47a617bc75ad1d3005c3ccf5e1 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11295 f2435a47a617bc75ad1d3005c3ccf5e1 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 Gene3D G3DSA:3.40.50.2300 2 127 5.4E-30 T 11-11-2016 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 SUPERFAMILY SSF46894 141 206 3.13E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 SMART SM00421 147 204 1.4E-23 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 9.2E-19 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 SUPERFAMILY SSF52172 2 133 1.11E-26 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 Pfam PF00072 Response regulator receiver domain 5 114 1.3E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.3E-10 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 Gene3D G3DSA:1.10.10.10 137 206 4.2E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22830 5083048b628b090df12730a9acdb57f1 222 SMART SM00448 2 116 2.3E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS16180 3d8054c3995116021fa41a7ea295c2c0 196 SUPERFAMILY SSF74942 90 159 2.48E-13 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal ATY42_RS16180 3d8054c3995116021fa41a7ea295c2c0 196 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 159 23.966 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 ATY42_RS16180 3d8054c3995116021fa41a7ea295c2c0 196 Gene3D G3DSA:3.30.300.70 3 86 1.3E-25 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal ATY42_RS16180 3d8054c3995116021fa41a7ea295c2c0 196 SUPERFAMILY SSF75420 5 89 3.01E-20 T 11-11-2016 IPR028989 Ribosome maturation factor RimP, N-terminal ATY42_RS16180 3d8054c3995116021fa41a7ea295c2c0 196 Gene3D G3DSA:2.30.30.180 94 155 1.8E-8 T 11-11-2016 IPR028998 Ribosome maturation factor RimP, C-terminal ATY42_RS16180 3d8054c3995116021fa41a7ea295c2c0 196 Pfam PF02576 Putative ribosome maturation factor RimP 12 155 1.3E-44 T 11-11-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 1.0E-39 T 11-11-2016 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 SUPERFAMILY SSF55282 4 180 8.95E-77 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 PIRSF PIRSF002161 1 180 2.5E-65 T 11-11-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 11-11-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 Pfam PF00281 Ribosomal protein L5 25 81 1.4E-27 T 11-11-2016 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 Gene3D G3DSA:3.30.1440.10 3 180 3.2E-78 T 11-11-2016 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17985 bfb74ae9a26712de5dc5cbf4f7ca5eab 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 43.182 T 11-11-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 2.7E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 SUPERFAMILY SSF52172 2 174 1.38E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 SMART SM00862 146 220 4.7E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 Gene3D G3DSA:1.10.10.10 125 222 1.1E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 SMART SM00448 1 113 2.9E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 Pfam PF00072 Response regulator receiver domain 3 112 1.9E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05890 8381b5f0a941a722e1d458c12633a2b8 225 Gene3D G3DSA:3.40.50.2300 2 120 3.9E-36 T 11-11-2016 ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 338 2.2E-16 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 ProSitePatterns PS00618 RecF protein signature 2. 304 322 - T 11-11-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 ProSitePatterns PS00617 RecF protein signature 1. 121 141 - T 11-11-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 368 82.703 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 Gene3D G3DSA:3.40.50.300 232 328 5.2E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 339 7.9E-74 T 11-11-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 Gene3D G3DSA:3.40.50.300 1 166 1.3E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00015 9e87a94040ca1bcb0491a3d589a2e062 368 SUPERFAMILY SSF52540 1 337 1.74E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-11-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 Gene3D G3DSA:3.40.47.10 142 193 2.8E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 Gene3D G3DSA:3.40.47.10 275 389 2.8E-58 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 SUPERFAMILY SSF53901 3 267 2.78E-78 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 Gene3D G3DSA:3.40.47.10 194 274 1.2E-68 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 Gene3D G3DSA:3.40.47.10 3 123 1.2E-68 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 SUPERFAMILY SSF53901 269 390 4.99E-40 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.2E-86 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 3.1E-43 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 5.9E-125 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS09130 0b5b47ac2fc80492a5ad3913fde81fab 391 PIRSF PIRSF000429 1 391 8.0E-114 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS01605 15cf55f9f21ad3adcbb14274cd7134f4 129 SUPERFAMILY SSF51182 2 108 3.96E-16 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS01605 15cf55f9f21ad3adcbb14274cd7134f4 129 Pfam PF07883 Cupin domain 22 93 6.0E-12 T 11-11-2016 IPR013096 Cupin 2, conserved barrel ATY42_RS01605 15cf55f9f21ad3adcbb14274cd7134f4 129 Gene3D G3DSA:2.60.120.10 1 100 1.3E-16 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.9E-21 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 SUPERFAMILY SSF51735 7 257 4.2E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 Pfam PF00106 short chain dehydrogenase 8 188 3.2E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PIRSF PIRSF000126 1 264 2.7E-53 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-8 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 191 0.0057 T 11-11-2016 ATY42_RS16275 88580eed8752d223a30097cd376bbfbd 266 Gene3D G3DSA:3.40.50.720 8 257 2.9E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 20 267 2.8E-71 T 11-11-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 SUPERFAMILY SSF63829 5 297 5.56E-60 T 11-11-2016 ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 207 224 9.2E-28 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 249 267 9.2E-28 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 20 37 9.2E-28 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 101 122 9.2E-28 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 144 166 9.2E-28 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 167 187 9.2E-28 T 11-11-2016 IPR005511 Senescence marker protein-30 (SMP-30) ATY42_RS14555 0e869fdf82720db5fe4d30c0af7251e0 303 Gene3D G3DSA:2.120.10.30 7 299 1.4E-84 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 Pfam PF14559 Tetratricopeptide repeat 135 192 2.1E-6 T 11-11-2016 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 Pfam PF00085 Thioredoxin 8 111 2.8E-26 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 Gene3D G3DSA:3.40.30.10 3 111 4.7E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 111 2.8E-30 T 11-11-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 PRINTS PR00421 Thioredoxin family signature 28 36 3.0E-6 T 11-11-2016 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 PRINTS PR00421 Thioredoxin family signature 36 45 3.0E-6 T 11-11-2016 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 PRINTS PR00421 Thioredoxin family signature 76 87 3.0E-6 T 11-11-2016 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 Gene3D G3DSA:1.25.40.10 200 285 8.5E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 Pfam PF14561 Tetratricopeptide repeat 199 285 1.2E-17 T 11-11-2016 ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 SUPERFAMILY SSF52833 6 111 1.4E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16690 a0e4beea7566cae3a0513deb88b8cf40 285 Gene3D G3DSA:1.25.40.10 135 195 1.2E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 67 80 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 50 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 226 8.0E-8 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Gene3D G3DSA:3.40.50.620 35 103 1.1E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Gene3D G3DSA:3.40.50.620 218 263 1.1E-37 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 364 556 1.8E-53 T 11-11-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 35 579 4.8E-200 T 11-11-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 577 51.962 T 11-11-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Gene3D G3DSA:2.40.240.10 487 575 3.4E-30 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 35 360 1.9E-92 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Gene3D G3DSA:2.40.240.10 372 486 4.2E-42 T 11-11-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 SUPERFAMILY SSF50715 364 575 3.5E-68 T 11-11-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Gene3D G3DSA:1.10.1160.10 285 361 1.2E-35 T 11-11-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 SUPERFAMILY SSF52374 19 361 1.03E-89 T 11-11-2016 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 52 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS18685 b3b3faea8d644562001d8538dd6dc7b7 579 Gene3D G3DSA:3.90.800.10 107 215 1.1E-40 T 11-11-2016 ATY42_RS06875 9f20eefe5b535216022736352045c8ae 420 SUPERFAMILY SSF101960 16 399 1.44E-92 T 11-11-2016 ATY42_RS06875 9f20eefe5b535216022736352045c8ae 420 Pfam PF01458 Uncharacterized protein family (UPF0051) 167 390 5.4E-62 T 11-11-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ATY42_RS06875 9f20eefe5b535216022736352045c8ae 420 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 131 399 3.5E-84 T 11-11-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 Gene3D G3DSA:1.10.520.20 3 103 2.7E-21 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 8 173 7.9E-33 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 SUPERFAMILY SSF47928 3 103 2.22E-18 T 11-11-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 175 17.896 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 1.2E-43 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 PRINTS PR00125 ATP synthase delta subunit signature 133 148 2.2E-21 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 2.2E-21 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 2.2E-21 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 PRINTS PR00125 ATP synthase delta subunit signature 7 26 2.2E-21 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS03515 fe9b4815ea0be9e02057b608cf545763 175 PRINTS PR00125 ATP synthase delta subunit signature 148 166 2.2E-21 T 11-11-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 SMART SM01382 124 253 4.3E-87 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 Gene3D G3DSA:4.10.950.10 196 274 2.8E-33 T 11-11-2016 IPR014726 Ribosomal protein L2, domain 3 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 SUPERFAMILY SSF50104 127 273 8.42E-57 T 11-11-2016 IPR008991 Translation protein SH3-like domain ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-11-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 Gene3D G3DSA:2.40.50.140 1 114 1.4E-48 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 5.0E-34 T 11-11-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 PIRSF PIRSF002158 6 275 4.0E-97 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 SMART SM01383 42 118 2.1E-42 T 11-11-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.4E-53 T 11-11-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 SUPERFAMILY SSF50249 3 125 8.91E-48 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 46.926 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 Gene3D G3DSA:2.30.30.30 119 195 1.1E-31 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 ATY42_RS18030 3f62ea9e48a14a976666416eb738e602 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 274 1.3E-130 T 11-11-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 39 66 - T 11-11-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 7 261 54.804 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 Gene3D G3DSA:1.10.8.100 198 259 2.8E-22 T 11-11-2016 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201 ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 9 258 2.6E-82 T 11-11-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 Gene3D G3DSA:3.40.50.150 9 195 1.0E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 SMART SM00650 23 194 8.0E-80 T 11-11-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 SUPERFAMILY SSF53335 15 259 2.89E-73 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS18875 671ee29fd4d8de646faaa04dfa5b2b73 262 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 258 9.6E-62 T 11-11-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 Gene3D G3DSA:3.20.20.70 131 313 1.0E-43 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 PRINTS PR00502 NUDIX hydrolase family signature 37 51 2.5E-8 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 PRINTS PR00502 NUDIX hydrolase family signature 51 66 2.5E-8 T 11-11-2016 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 TIGRFAM TIGR00586 mutt: mutator mutT protein 7 132 2.2E-33 T 11-11-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 Gene3D G3DSA:3.90.79.10 7 130 1.4E-34 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 Pfam PF00293 NUDIX domain 11 124 1.6E-19 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 SUPERFAMILY SSF51391 118 313 2.49E-49 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 Pfam PF02581 Thiamine monophosphate synthase/TENI 136 311 2.3E-41 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS19200 13f0aeb1ffd45f12fdcde664034978c2 315 SUPERFAMILY SSF55811 6 131 5.15E-35 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS03030 d004af931137ad1d2bd822c080938c4a 713 Gene3D G3DSA:2.40.170.20 182 713 4.0E-141 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS03030 d004af931137ad1d2bd822c080938c4a 713 Gene3D G3DSA:2.170.130.10 49 175 7.6E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS03030 d004af931137ad1d2bd822c080938c4a 713 Pfam PF00593 TonB dependent receptor 471 711 5.2E-32 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS03030 d004af931137ad1d2bd822c080938c4a 713 SUPERFAMILY SSF56935 28 713 3.66E-131 T 11-11-2016 ATY42_RS03030 d004af931137ad1d2bd822c080938c4a 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 168 6.8E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS03030 d004af931137ad1d2bd822c080938c4a 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 68 713 6.6E-104 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 ATY42_RS22380 990de0ee39dae536ba359c7d96ae5aa8 142 Pfam PF02566 OsmC-like protein 44 139 1.4E-19 T 11-11-2016 IPR003718 OsmC/Ohr family ATY42_RS22380 990de0ee39dae536ba359c7d96ae5aa8 142 SUPERFAMILY SSF82784 5 141 4.06E-45 T 11-11-2016 IPR003718 OsmC/Ohr family ATY42_RS22380 990de0ee39dae536ba359c7d96ae5aa8 142 Gene3D G3DSA:2.20.25.10 4 48 1.2E-22 T 11-11-2016 ATY42_RS22380 990de0ee39dae536ba359c7d96ae5aa8 142 Gene3D G3DSA:3.30.300.20 49 141 7.6E-38 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS22380 990de0ee39dae536ba359c7d96ae5aa8 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 8 140 2.5E-55 T 11-11-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 ATY42_RS04375 99e9034df006b561fd29d2866ec5efcd 160 SUPERFAMILY SSF52833 1 157 8.8E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS04375 99e9034df006b561fd29d2866ec5efcd 160 Pfam PF08534 Redoxin 6 155 1.1E-25 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ATY42_RS04375 99e9034df006b561fd29d2866ec5efcd 160 Gene3D G3DSA:3.40.30.10 1 158 1.1E-48 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS20385 f888226743beb974e0a0faaed79b63d3 163 Gene3D G3DSA:3.40.630.30 4 160 1.8E-61 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS20385 f888226743beb974e0a0faaed79b63d3 163 SUPERFAMILY SSF55729 7 156 1.63E-39 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS20385 f888226743beb974e0a0faaed79b63d3 163 Pfam PF00583 Acetyltransferase (GNAT) family 60 140 2.4E-17 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS08770 69817536bd52070effbfd3cca6de729c 202 SUPERFAMILY SSF48498 94 189 2.18E-6 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS08770 69817536bd52070effbfd3cca6de729c 202 Gene3D G3DSA:1.10.357.10 27 202 3.8E-29 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS08770 69817536bd52070effbfd3cca6de729c 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 2.0E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS08770 69817536bd52070effbfd3cca6de729c 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 2.0E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS08770 69817536bd52070effbfd3cca6de729c 202 SUPERFAMILY SSF46689 21 78 5.49E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08770 69817536bd52070effbfd3cca6de729c 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 73 8.6E-15 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS18740 03faf07e8c2d9faffbf8e2c378c8d1e3 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 31 130 2.4E-12 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ATY42_RS18740 03faf07e8c2d9faffbf8e2c378c8d1e3 186 SUPERFAMILY SSF53927 5 180 1.19E-32 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS18740 03faf07e8c2d9faffbf8e2c378c8d1e3 186 Gene3D G3DSA:3.40.140.10 17 178 6.0E-32 T 11-11-2016 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 SUPERFAMILY SSF64288 52 229 3.14E-31 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 Pfam PF07702 UTRA domain 88 223 8.5E-26 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 1 231 1.5E-93 T 11-11-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 2.2E-5 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 2.2E-5 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 SMART SM00866 87 224 1.2E-23 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 SUPERFAMILY SSF46785 1 68 2.46E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 5.7E-19 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 SMART SM00345 5 64 1.0E-17 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 Gene3D G3DSA:1.10.10.10 1 68 6.1E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11890 3e5bb17265396b968d5841aadf009fd8 234 Gene3D G3DSA:3.40.1410.10 84 219 1.3E-37 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 SUPERFAMILY SSF55920 180 441 7.72E-82 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 SMART SM01011 7 141 6.2E-68 T 11-11-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 SUPERFAMILY SSF53092 6 179 3.66E-57 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 PRINTS PR00599 Methionine aminopeptidase-1 signature 257 273 1.9E-5 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 PRINTS PR00599 Methionine aminopeptidase-1 signature 375 387 1.9E-5 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 Gene3D G3DSA:3.40.350.10 6 183 3.5E-57 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 Gene3D G3DSA:3.90.230.10 184 438 2.4E-82 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 Pfam PF05195 Aminopeptidase P, N-terminal domain 12 131 5.3E-40 T 11-11-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 ATY42_RS05515 c95e8a32254dce08839eca25c5d92bd3 446 Pfam PF00557 Metallopeptidase family M24 186 417 1.2E-61 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS07630 4272f73c824fb7d031137bec243aee95 315 SUPERFAMILY SSF103481 40 139 6.54E-8 T 11-11-2016 ATY42_RS07630 4272f73c824fb7d031137bec243aee95 315 SUPERFAMILY SSF103481 195 290 2.22E-9 T 11-11-2016 ATY42_RS07630 4272f73c824fb7d031137bec243aee95 315 Pfam PF00892 EamA-like transporter family 148 289 2.0E-14 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS07630 4272f73c824fb7d031137bec243aee95 315 Pfam PF00892 EamA-like transporter family 16 138 5.6E-11 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 312 2.2E-50 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 SUPERFAMILY SSF52540 64 407 2.1E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 SMART SM01086 319 414 5.7E-33 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 SMART SM00382 113 266 1.1E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Gene3D G3DSA:1.10.8.60 318 417 1.7E-37 T 11-11-2016 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 9 417 53.344 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 SMART SM00994 15 54 3.7E-24 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Gene3D G3DSA:3.40.50.300 67 255 2.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Gene3D G3DSA:3.40.50.300 296 313 2.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Pfam PF06689 ClpX C4-type zinc finger 16 53 7.8E-21 T 11-11-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 319 397 1.5E-16 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 14 414 1.4E-205 T 11-11-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ATY42_RS04950 bdcd8fd9b6f1b038b5863df5985d2ea7 428 SUPERFAMILY SSF57716 16 51 9.27E-12 T 11-11-2016 ATY42_RS09265 7e7fcef0e20dec63e88d880d98cf9f77 64 Pfam PF09791 Oxidoreductase-like protein, N-terminal 14 52 1.6E-13 T 11-11-2016 IPR019180 Oxidoreductase-like, N-terminal ATY42_RS07395 d57f2d3e383f296720d045ad5a5a5fef 152 Gene3D G3DSA:2.60.120.10 35 151 9.4E-34 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS07395 d57f2d3e383f296720d045ad5a5a5fef 152 SUPERFAMILY SSF51182 35 150 1.13E-27 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS07395 d57f2d3e383f296720d045ad5a5a5fef 152 Pfam PF07883 Cupin domain 65 128 4.6E-12 T 11-11-2016 IPR013096 Cupin 2, conserved barrel ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 PIRSF PIRSF006443 1 165 1.7E-61 T 11-11-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 SMART SM00852 13 157 2.4E-26 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 Gene3D G3DSA:3.40.980.10 9 161 3.4E-43 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 3.3E-33 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 SUPERFAMILY SSF53218 7 165 7.2E-42 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 6 167 2.4E-82 T 11-11-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 ATY42_RS18195 8043fea6befdda1f87bb4aeda8ee32cb 172 Pfam PF00994 Probable molybdopterin binding domain 14 154 4.9E-30 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS07980 828744b88322985718b5ee529e97f052 350 Gene3D G3DSA:3.40.50.300 160 342 3.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07980 828744b88322985718b5ee529e97f052 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-35 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 335 4.7E-137 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 PIRSF PIRSF002401 1 349 1.6E-132 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 Pfam PF01018 GTP1/OBG 3 158 1.3E-59 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 SUPERFAMILY SSF52540 152 340 4.51E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07980 828744b88322985718b5ee529e97f052 350 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-11-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 Gene3D G3DSA:2.70.210.12 3 156 1.7E-59 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 Hamap MF_01454 GTPase Obg [obg]. 2 337 47.329 T 11-11-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 SUPERFAMILY SSF82051 3 158 3.27E-57 T 11-11-2016 IPR006169 GTP1/OBG domain GO:0005525 ATY42_RS07980 828744b88322985718b5ee529e97f052 350 Pfam PF01926 50S ribosome-binding GTPase 161 288 1.8E-23 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 Pfam PF00549 CoA-ligase 262 382 4.2E-26 T 11-11-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 Pfam PF08442 ATP-grasp domain 2 202 1.1E-72 T 11-11-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 41.37 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 SUPERFAMILY SSF56059 1 238 7.78E-75 T 11-11-2016 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 PIRSF PIRSF001554 1 388 3.2E-147 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 Gene3D G3DSA:3.30.470.20 97 239 5.0E-51 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 5.7E-157 T 11-11-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 Gene3D G3DSA:3.30.1490.20 22 96 9.7E-28 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 Gene3D G3DSA:3.40.50.261 241 383 4.2E-64 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 11-11-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS07820 b608617f7bf58ddf376dbf01520262ec 389 SUPERFAMILY SSF52210 239 385 3.4E-53 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS12810 d36ba0fe299cac17b521f3e65e590bd3 97 Gene3D G3DSA:1.20.58.60 41 87 4.4E-4 T 11-11-2016 ATY42_RS06280 1e4cfe4b05cf97ffdcac0506f1b81294 290 Gene3D G3DSA:3.40.50.300 10 158 2.0E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06280 1e4cfe4b05cf97ffdcac0506f1b81294 290 Pfam PF03668 P-loop ATPase protein family 8 287 2.2E-93 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 ATY42_RS06280 1e4cfe4b05cf97ffdcac0506f1b81294 290 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 37.925 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 ATY42_RS06280 1e4cfe4b05cf97ffdcac0506f1b81294 290 SUPERFAMILY SSF52540 2 159 2.77E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06280 1e4cfe4b05cf97ffdcac0506f1b81294 290 PIRSF PIRSF005052 6 290 2.3E-108 T 11-11-2016 IPR005337 RapZ-like family GO:0005524 ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.1E-27 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 Pfam PF03880 DbpA RNA binding domain 515 584 1.5E-22 T 11-11-2016 IPR005580 DbpA, RNA-binding domain ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 4 586 47.13 T 11-11-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 Gene3D G3DSA:3.40.50.300 10 209 2.4E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 SMART SM00487 28 226 1.2E-63 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 SMART SM00490 262 343 1.4E-32 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 Gene3D G3DSA:3.40.50.300 210 377 4.1E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 SUPERFAMILY SSF52540 78 364 6.39E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07615 6256e3897af9a6b653a6b274cdd1d9a6 634 Pfam PF00270 DEAD/DEAH box helicase 34 197 1.7E-51 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Pfam PF01336 OB-fold nucleic acid binding domain 1030 1098 2.9E-8 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Gene3D G3DSA:3.20.20.140 6 268 4.6E-15 T 11-11-2016 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Pfam PF02811 PHP domain 8 184 3.2E-24 T 11-11-2016 IPR004013 PHP domain GO:0003824 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 304 748 6.4E-166 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 SMART SM00481 7 88 6.1E-15 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Pfam PF14579 Helix-hairpin-helix motif 823 912 1.7E-26 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Gene3D G3DSA:2.40.50.140 1028 1098 8.6E-4 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 SUPERFAMILY SSF50249 1028 1098 4.86E-5 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 SUPERFAMILY SSF160975 838 894 1.7E-5 T 11-11-2016 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 994 0.0 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 Gene3D G3DSA:1.10.150.280 848 895 6.0E-7 T 11-11-2016 ATY42_RS09530 b0d89761058cd733e6dd0243d6f61d55 1196 SUPERFAMILY SSF89550 6 249 1.59E-9 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 Gene3D G3DSA:1.10.3210.10 17 102 3.3E-5 T 11-11-2016 IPR006674 HD domain ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 251 577 9.4E-31 T 11-11-2016 IPR006474 Helicase Cas3, CRISPR-associated, core ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 Gene3D G3DSA:3.40.50.300 455 576 3.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 19 184 2.8E-27 T 11-11-2016 IPR006483 CRISPR-associated Cas3-HD domain ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 SUPERFAMILY SSF109604 9 104 4.17E-8 T 11-11-2016 ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 Gene3D G3DSA:3.40.50.300 237 415 4.1E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 Pfam PF00270 DEAD/DEAH box helicase 251 411 9.2E-9 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 SUPERFAMILY SSF52540 249 560 4.6E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04210 e3050f551e49827a3ad7d08fea60f73e 760 SMART SM00487 223 446 0.0051 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS05820 4dde47ac070ade192ae6ea49d17de800 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 14 223 4.0E-65 T 11-11-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ATY42_RS05820 4dde47ac070ade192ae6ea49d17de800 230 SUPERFAMILY SSF161098 5 221 1.24E-48 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS05820 4dde47ac070ade192ae6ea49d17de800 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 223 2.7E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS05820 4dde47ac070ade192ae6ea49d17de800 230 Gene3D G3DSA:1.10.3720.10 9 226 1.7E-44 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS08840 6dae553e4d8ceebbaa12289d92f9f4bf 460 Gene3D G3DSA:3.30.1330.90 11 159 3.6E-54 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 ATY42_RS08840 6dae553e4d8ceebbaa12289d92f9f4bf 460 SUPERFAMILY SSF143548 17 158 5.75E-44 T 11-11-2016 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 ATY42_RS08840 6dae553e4d8ceebbaa12289d92f9f4bf 460 Pfam PF03313 Serine dehydratase alpha chain 189 454 1.5E-106 T 11-11-2016 IPR005130 Serine dehydratase-like, alpha subunit ATY42_RS08840 6dae553e4d8ceebbaa12289d92f9f4bf 460 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 457 8.4E-218 T 11-11-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ATY42_RS08840 6dae553e4d8ceebbaa12289d92f9f4bf 460 Pfam PF03315 Serine dehydratase beta chain 4 158 3.1E-58 T 11-11-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ATY42_RS07885 edcc0afedc2909aa4fcfd18ec7c1c97e 811 Gene3D G3DSA:2.40.170.20 174 811 7.4E-86 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS07885 edcc0afedc2909aa4fcfd18ec7c1c97e 811 Pfam PF00593 TonB dependent receptor 497 797 2.1E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS07885 edcc0afedc2909aa4fcfd18ec7c1c97e 811 SUPERFAMILY SSF56935 34 811 5.49E-104 T 11-11-2016 ATY42_RS07885 edcc0afedc2909aa4fcfd18ec7c1c97e 811 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 171 8.5E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS07885 edcc0afedc2909aa4fcfd18ec7c1c97e 811 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 41 - T 11-11-2016 IPR010916 TonB box, conserved site ATY42_RS07885 edcc0afedc2909aa4fcfd18ec7c1c97e 811 Gene3D G3DSA:2.170.130.10 48 173 1.8E-30 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 Gene3D G3DSA:3.40.50.300 4 275 1.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 SUPERFAMILY SSF52540 3 94 1.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 SUPERFAMILY SSF52540 121 230 1.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 Gene3D G3DSA:3.40.50.300 312 522 1.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 Pfam PF00005 ABC transporter 20 180 3.6E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 Pfam PF00005 ABC transporter 331 464 6.8E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 Pfam PF12848 ABC transporter 219 293 1.2E-9 T 11-11-2016 IPR032781 ABC-transporter extension domain ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 ProSitePatterns PS00211 ABC transporters family signature. 436 450 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 SMART SM00382 28 225 2.9E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 SMART SM00382 339 510 2.1E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 Pfam PF16326 ABC transporter C-terminal domain 562 630 2.2E-21 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ATY42_RS13440 eaa4f7f80b6d587222e1309009810c9f 631 SUPERFAMILY SSF52540 309 511 2.53E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14630 88cfbd08bbf0c3fadbbf74a5f3847b16 328 Pfam PF09335 SNARE associated Golgi protein 27 157 5.4E-13 T 11-11-2016 IPR032816 SNARE associated Golgi protein ATY42_RS14630 88cfbd08bbf0c3fadbbf74a5f3847b16 328 SUPERFAMILY SSF52821 206 312 6.81E-21 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS14630 88cfbd08bbf0c3fadbbf74a5f3847b16 328 Gene3D G3DSA:3.40.250.10 206 312 1.2E-14 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS14630 88cfbd08bbf0c3fadbbf74a5f3847b16 328 Pfam PF00581 Rhodanese-like domain 223 304 1.9E-5 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 563 38.991 T 11-11-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Gene3D G3DSA:3.30.930.10 11 234 3.1E-98 T 11-11-2016 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Gene3D G3DSA:3.30.930.10 386 468 3.1E-98 T 11-11-2016 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Gene3D G3DSA:3.40.50.800 469 558 1.1E-20 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 SUPERFAMILY SSF55681 403 474 1.83E-99 T 11-11-2016 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 SUPERFAMILY SSF55681 10 237 1.83E-99 T 11-11-2016 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 3.6E-44 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Pfam PF03129 Anticodon binding domain 471 555 9.9E-13 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 556 6.4E-211 T 11-11-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Gene3D G3DSA:3.90.960.10 252 385 1.4E-31 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.8E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.8E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.8E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.8E-16 T 11-11-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 SUPERFAMILY SSF52954 460 562 1.62E-23 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 Pfam PF04073 Aminoacyl-tRNA editing domain 256 375 2.4E-29 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATY42_RS03910 40a26e897befad7085051c63b09297b9 564 SUPERFAMILY SSF55826 219 386 3.4E-33 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATY42_RS02985 6e34aec3ada4c0bf5c06f2cb3c2495fd 411 Pfam PF01610 Transposase 155 390 8.6E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS02985 6e34aec3ada4c0bf5c06f2cb3c2495fd 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS12840 eb401ac080fdbbb00d1ce1b29507be2e 369 Gene3D G3DSA:3.90.1150.10 242 364 1.9E-25 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS12840 eb401ac080fdbbb00d1ce1b29507be2e 369 PIRSF PIRSF000390 1 368 3.0E-102 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATY42_RS12840 eb401ac080fdbbb00d1ce1b29507be2e 369 SUPERFAMILY SSF53383 2 364 1.87E-96 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS12840 eb401ac080fdbbb00d1ce1b29507be2e 369 Gene3D G3DSA:3.40.640.10 14 239 2.6E-66 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS12840 eb401ac080fdbbb00d1ce1b29507be2e 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 14 362 1.4E-98 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Pfam PF00873 AcrB/AcrD/AcrF family 6 1015 3.5E-258 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:3.30.70.1320 269 303 6.7E-5 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:3.30.70.1320 139 177 6.7E-5 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:1.10.3850.10 799 1016 4.2E-53 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82693 267 324 5.23E-12 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82693 137 180 5.23E-12 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1016 2.1E-286 T 11-11-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:3.30.70.1430 553 655 3.6E-5 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82714 708 793 1.44E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:1.20.1640.10 304 497 6.2E-43 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82866 301 490 1.83E-32 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82714 182 262 1.09E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82693 551 651 8.37E-10 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:3.30.2090.10 182 262 5.3E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:3.30.2090.10 708 794 2.2E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 Gene3D G3DSA:3.30.70.1430 46 138 2.1E-18 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 5.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 PRINTS PR00702 Acriflavin resistance protein family signature 537 554 5.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 5.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 5.2E-22 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82866 793 1016 1.1E-46 T 11-11-2016 ATY42_RS11810 a455beecb1288322149d109862e1a9bd 1030 SUPERFAMILY SSF82693 48 125 6.28E-17 T 11-11-2016 ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 6 246 7.9E-73 T 11-11-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 Gene3D G3DSA:3.40.1280.10 95 249 4.5E-55 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 Gene3D G3DSA:3.30.1330.30 2 77 9.1E-17 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 SMART SM00967 7 83 4.2E-10 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 5 247 39.918 T 11-11-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 Pfam PF00588 SpoU rRNA Methylase family 100 239 1.7E-39 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 77 1.5E-12 T 11-11-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 SUPERFAMILY SSF55315 2 76 4.83E-14 T 11-11-2016 IPR029064 50S ribosomal protein L30e-like ATY42_RS10145 11656be9e2bc9910df878c5252ba0009 255 SUPERFAMILY SSF75217 72 247 5.62E-48 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 589 32.235 T 11-11-2016 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Pfam PF04997 RNA polymerase Rpb1, domain 1 17 342 1.6E-86 T 11-11-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Pfam PF05000 RNA polymerase Rpb1, domain 4 675 764 7.0E-19 T 11-11-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 645 1.2E-27 T 11-11-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.5E-27 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 3.7E-8 T 11-11-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.505 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 11-11-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Gene3D G3DSA:2.40.50.100 1158 1209 2.8E-7 T 11-11-2016 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Pfam PF04998 RNA polymerase Rpb1, domain 5 767 1316 2.1E-77 T 11-11-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 SUPERFAMILY SSF64484 1135 1364 0.0 T 11-11-2016 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 SUPERFAMILY SSF64484 16 946 0.0 T 11-11-2016 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Gene3D G3DSA:2.40.40.20 349 376 1.1E-37 T 11-11-2016 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 Gene3D G3DSA:2.40.40.20 417 489 1.1E-37 T 11-11-2016 ATY42_RS18075 23b06c4fcad0b23f205fda78dbab9ace 1405 SMART SM00663 235 514 1.1E-183 T 11-11-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS12750 04d34cde9af3f1cb2781b00098d9d73e 221 Pfam PF13860 FlgD Ig-like domain 103 177 2.5E-20 T 11-11-2016 IPR025965 FlgD Ig-like domain ATY42_RS12750 04d34cde9af3f1cb2781b00098d9d73e 221 Pfam PF03963 Flagellar hook capping protein - N-terminal region 15 75 3.6E-22 T 11-11-2016 IPR005648 Flagellar hook capping protein ATY42_RS12750 04d34cde9af3f1cb2781b00098d9d73e 221 Pfam PF13861 FlgD Tudor-like domain 84 217 4.3E-15 T 11-11-2016 IPR025963 FlgD Tudor-like domain ATY42_RS18920 4fa8e2ed8f12306a0a716483e5822d09 212 Gene3D G3DSA:1.20.1440.20 16 192 7.2E-64 T 11-11-2016 IPR023353 LemA-like domain ATY42_RS18920 4fa8e2ed8f12306a0a716483e5822d09 212 SUPERFAMILY SSF140478 26 179 6.41E-54 T 11-11-2016 IPR023353 LemA-like domain ATY42_RS18920 4fa8e2ed8f12306a0a716483e5822d09 212 Pfam PF04011 LemA family 8 192 7.8E-67 T 11-11-2016 IPR007156 LemA ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 285 2.3E-63 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 325 487 1.7E-49 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 SUPERFAMILY SSF117457 316 487 1.57E-62 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 Pfam PF05683 Fumarase C-terminus 289 488 7.6E-79 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 Gene3D G3DSA:3.20.130.10 310 487 5.0E-72 T 11-11-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.3E-100 T 11-11-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ATY42_RS11595 775c224f341e7994ccd8094e953a8e19 505 PIRSF PIRSF001394 1 505 3.3E-219 T 11-11-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 ATY42_RS16875 d8872c2fea3dd662cf50dcf268739fe4 66 Gene3D G3DSA:3.10.20.30 1 66 2.0E-26 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS16875 d8872c2fea3dd662cf50dcf268739fe4 66 SUPERFAMILY SSF54285 2 65 1.06E-17 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ATY42_RS16875 d8872c2fea3dd662cf50dcf268739fe4 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.2E-21 T 11-11-2016 IPR010035 ThiS, thiamine-biosynthesis ATY42_RS16875 d8872c2fea3dd662cf50dcf268739fe4 66 Pfam PF02597 ThiS family 3 66 1.1E-14 T 11-11-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 SUPERFAMILY SSF51717 23 297 5.89E-87 T 11-11-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 SMART SM01018 322 405 5.0E-45 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 608 898 3.0E-121 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Gene3D G3DSA:1.10.1240.10 316 402 4.3E-38 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 PIRSF PIRSF000381 1 885 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 SUPERFAMILY SSF47644 317 404 8.5E-29 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Gene3D G3DSA:3.40.50.280 413 563 1.4E-61 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Pfam PF02310 B12 binding domain 417 507 1.9E-19 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Pfam PF00809 Pterin binding enzyme 27 265 1.2E-60 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 SUPERFAMILY SSF56507 571 917 3.79E-128 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Gene3D G3DSA:3.20.20.20 23 303 2.9E-112 T 11-11-2016 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 SUPERFAMILY SSF52242 411 563 8.77E-44 T 11-11-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Pfam PF02607 B12 binding domain 325 397 4.8E-27 T 11-11-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 Gene3D G3DSA:3.10.196.10 627 917 9.7E-106 T 11-11-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS10080 f5ea18b2c0746a5b9795258dec723219 917 TIGRFAM TIGR02082 metH: methionine synthase 4 882 0.0 T 11-11-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 Pfam PF02261 Aspartate decarboxylase 1 114 1.0E-47 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 2.1E-49 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 Gene3D G3DSA:2.40.40.20 1 124 2.1E-52 T 11-11-2016 ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 PIRSF PIRSF006246 1 126 1.4E-48 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 SUPERFAMILY SSF50692 1 121 1.24E-46 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 122 2.0E-64 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATY42_RS11735 babd76a19e013be79307f2abdbc8576f 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 68.388 T 11-11-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 SMART SM00862 150 225 6.1E-28 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 2 226 3.9E-112 T 11-11-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 Gene3D G3DSA:3.40.50.2300 3 127 8.0E-41 T 11-11-2016 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 1.4E-25 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 SUPERFAMILY SSF52172 3 125 3.27E-42 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 Gene3D G3DSA:1.10.10.10 128 226 1.4E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 SMART SM00448 3 116 1.4E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 SUPERFAMILY SSF46894 127 225 2.01E-29 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS18465 f63982ed1e72aac2a194730ea314fd55 229 Pfam PF00072 Response regulator receiver domain 5 117 5.4E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS16310 616e7066683ea02ea838f977907da608 788 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 500 4.1E-31 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS16310 616e7066683ea02ea838f977907da608 788 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 501 1.5E-36 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS16310 616e7066683ea02ea838f977907da608 788 SMART SM00267 341 512 4.6E-42 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS16310 616e7066683ea02ea838f977907da608 788 Gene3D G3DSA:3.20.20.450 525 774 7.1E-89 T 11-11-2016 IPR001633 EAL domain ATY42_RS16310 616e7066683ea02ea838f977907da608 788 SUPERFAMILY SSF158472 294 342 2.62E-7 T 11-11-2016 ATY42_RS16310 616e7066683ea02ea838f977907da608 788 SMART SM00052 522 767 9.5E-98 T 11-11-2016 IPR001633 EAL domain ATY42_RS16310 616e7066683ea02ea838f977907da608 788 Gene3D G3DSA:3.30.70.270 353 500 7.4E-42 T 11-11-2016 ATY42_RS16310 616e7066683ea02ea838f977907da608 788 Pfam PF14827 Double sensory domain of two-component sensor kinase 47 247 8.8E-12 T 11-11-2016 IPR029150 Double Cache domain 3 ATY42_RS16310 616e7066683ea02ea838f977907da608 788 Pfam PF00563 EAL domain 529 762 5.2E-67 T 11-11-2016 IPR001633 EAL domain ATY42_RS16310 616e7066683ea02ea838f977907da608 788 SUPERFAMILY SSF55073 357 500 4.63E-36 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS16310 616e7066683ea02ea838f977907da608 788 SMART SM00304 294 346 2.1E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS16310 616e7066683ea02ea838f977907da608 788 Pfam PF00672 HAMP domain 275 341 2.3E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS16310 616e7066683ea02ea838f977907da608 788 SUPERFAMILY SSF141868 528 775 3.01E-83 T 11-11-2016 IPR001633 EAL domain ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 Gene3D G3DSA:2.40.50.230 428 515 6.0E-26 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 SUPERFAMILY SSF69279 219 360 1.19E-7 T 11-11-2016 ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 545 652 2.1E-35 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 682 825 1.4E-37 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 SUPERFAMILY SSF69279 27 206 2.21E-49 T 11-11-2016 ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 SUPERFAMILY SSF69255 422 515 7.32E-22 T 11-11-2016 ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 Gene3D G3DSA:3.55.50.10 107 210 3.8E-28 T 11-11-2016 ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 Pfam PF05954 Phage late control gene D protein (GPD) 41 361 2.7E-72 T 11-11-2016 ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 32 572 5.0E-76 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS00960 de3469216d70f19f25c48ff9a01b9e54 907 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 31 566 9.0E-95 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS13370 dfb30458179de489d7962d4ca5026e63 239 SUPERFAMILY SSF53335 18 234 1.07E-51 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS13370 dfb30458179de489d7962d4ca5026e63 239 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 239 39.707 T 11-11-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ATY42_RS13370 dfb30458179de489d7962d4ca5026e63 239 Gene3D G3DSA:3.40.50.150 27 220 6.8E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS13370 dfb30458179de489d7962d4ca5026e63 239 Pfam PF13489 Methyltransferase domain 53 207 6.4E-27 T 11-11-2016 ATY42_RS13370 dfb30458179de489d7962d4ca5026e63 239 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 233 1.2E-90 T 11-11-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 ATY42_RS17255 bc8dd6786ae17a69747e3a22a99c464b 465 SUPERFAMILY SSF50494 243 462 9.74E-37 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS17255 bc8dd6786ae17a69747e3a22a99c464b 465 Pfam PF13365 Trypsin-like peptidase domain 268 420 4.5E-6 T 11-11-2016 ATY42_RS17255 bc8dd6786ae17a69747e3a22a99c464b 465 Gene3D G3DSA:2.40.10.10 257 384 7.3E-39 T 11-11-2016 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 73 87 - T 11-11-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 11 281 1.0E-76 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 10 284 35.414 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 SUPERFAMILY SSF54506 10 139 1.65E-38 T 11-11-2016 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 SUPERFAMILY SSF54506 149 282 3.61E-46 T 11-11-2016 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 Gene3D G3DSA:3.10.310.10 128 272 2.2E-48 T 11-11-2016 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 Gene3D G3DSA:3.10.310.10 7 127 5.1E-45 T 11-11-2016 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 Pfam PF01678 Diaminopimelate epimerase 162 277 5.0E-26 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATY42_RS20065 71d6d8d1a5c1f5baf8fbee2c3d767b3a 284 Pfam PF01678 Diaminopimelate epimerase 12 130 4.7E-23 T 11-11-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 Gene3D G3DSA:1.20.1640.10 415 610 1.3E-28 T 11-11-2016 ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 Pfam PF02355 Protein export membrane protein 434 602 5.5E-21 T 11-11-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 613 46.212 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 Pfam PF07549 SecD/SecF GG Motif 115 140 6.1E-6 T 11-11-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 344 592 2.0E-63 T 11-11-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 SUPERFAMILY SSF82866 409 606 3.66E-38 T 11-11-2016 ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 598 9.6E-123 T 11-11-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ATY42_RS12300 41aea2416a90d9111fbaecd72438cf67 614 Pfam PF13721 SecD export protein N-terminal TM region 2 102 1.5E-32 T 11-11-2016 IPR027398 SecD export protein N-terminal TM domain ATY42_RS05560 12163d4dc80abe0ed76e787837d6b876 199 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 194 6.2E-53 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 ATY42_RS05560 12163d4dc80abe0ed76e787837d6b876 199 Pfam PF01725 Ham1 family 4 191 2.1E-50 T 11-11-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206|Reactome: R-HSA-15869 ATY42_RS05560 12163d4dc80abe0ed76e787837d6b876 199 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.002 T 11-11-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 ATY42_RS05560 12163d4dc80abe0ed76e787837d6b876 199 Gene3D G3DSA:3.90.950.10 1 195 1.5E-74 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ATY42_RS05560 12163d4dc80abe0ed76e787837d6b876 199 SUPERFAMILY SSF52972 1 194 9.16E-70 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ATY42_RS09305 881da3488c8af23b1f4719a221aec5ad 356 Gene3D G3DSA:3.40.50.150 73 352 9.4E-81 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09305 881da3488c8af23b1f4719a221aec5ad 356 SUPERFAMILY SSF53335 79 352 2.76E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09305 881da3488c8af23b1f4719a221aec5ad 356 Pfam PF02353 Mycolic acid cyclopropane synthetase 77 338 6.8E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 7.6E-21 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 SUPERFAMILY SSF55653 61 147 1.12E-21 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 9.9E-21 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 Gene3D G3DSA:3.40.5.10 1 52 5.4E-24 T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.569 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 2.7E-41 T 11-11-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 Gene3D G3DSA:3.10.430.100 62 147 6.4E-23 T 11-11-2016 IPR020069 Ribosomal protein L9, C-terminal ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 SUPERFAMILY SSF55658 1 57 7.85E-18 T 11-11-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ATY42_RS11985 084ed57cf20552bbeabbf7940859810d 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-11-2016 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 Gene3D G3DSA:2.60.15.10 1 89 1.5E-28 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 9.8E-41 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 85 3.0E-37 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.143 T 11-11-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 5 83 5.0E-27 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 SUPERFAMILY SSF46604 87 135 8.89E-9 T 11-11-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 Gene3D G3DSA:1.20.5.440 91 133 1.9E-5 T 11-11-2016 ATY42_RS03535 e462587b5b01e0756da3255b099434ec 140 SUPERFAMILY SSF51344 3 85 7.19E-23 T 11-11-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS00265 f6c05af100b18ccbf5b848f8f4790a2e 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 75 1.5E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS03970 f6c05af100b18ccbf5b848f8f4790a2e 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 75 1.5E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS18280 f6c05af100b18ccbf5b848f8f4790a2e 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 75 1.5E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 318 425 5.1E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 Gene3D G3DSA:3.30.450.20 99 201 8.0E-6 T 11-11-2016 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 97 424 2.1E-125 T 11-11-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 SUPERFAMILY SSF47384 196 273 9.42E-19 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 210 272 2.3E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 SUPERFAMILY SSF55874 262 424 8.12E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 Gene3D G3DSA:3.30.565.10 260 424 2.3E-41 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 2.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 2.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.8E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 SMART SM00388 209 273 2.4E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 Gene3D G3DSA:1.10.287.130 202 259 2.1E-20 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 SMART SM00387 316 428 1.3E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 Pfam PF11808 Domain of unknown function (DUF3329) 8 93 2.9E-21 T 11-11-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 ATY42_RS18470 908f729d6f66d3006085dac434eb4c38 442 SUPERFAMILY SSF55785 89 161 3.59E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS19800 03edbb22724fa5341778baf2207549ca 146 SMART SM00448 5 129 7.0E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19800 03edbb22724fa5341778baf2207549ca 146 Gene3D G3DSA:3.40.50.2300 6 133 7.4E-31 T 11-11-2016 ATY42_RS19800 03edbb22724fa5341778baf2207549ca 146 SUPERFAMILY SSF52172 6 141 6.12E-29 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS19800 03edbb22724fa5341778baf2207549ca 146 Pfam PF00072 Response regulator receiver domain 7 129 3.5E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SUPERFAMILY SSF47384 282 345 8.24E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 282 342 1.9E-15 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Gene3D G3DSA:2.30.30.40 529 550 5.6E-23 T 11-11-2016 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Gene3D G3DSA:2.30.30.40 616 659 5.6E-23 T 11-11-2016 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SMART SM00073 4 102 1.4E-29 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Gene3D G3DSA:1.10.287.560 281 345 3.2E-19 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SUPERFAMILY SSF55874 346 527 3.8E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Pfam PF01584 CheW-like domain 534 663 8.5E-27 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Gene3D G3DSA:3.30.565.10 346 528 7.1E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SMART SM00260 521 660 2.2E-33 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Gene3D G3DSA:2.40.50.180 553 615 1.4E-11 T 11-11-2016 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 528 5.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SMART SM00387 389 529 9.3E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SUPERFAMILY SSF50341 528 660 1.57E-31 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SUPERFAMILY SSF47226 5 129 4.19E-32 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 4.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Pfam PF01627 Hpt domain 10 100 8.4E-19 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 Gene3D G3DSA:1.20.120.160 2 145 1.2E-40 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS14165 77f3b192e2e1f833ac25aaf16fd7d67f 669 SMART SM01231 281 344 3.7E-18 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS02290 f489dd6365e944e39c8fa281741fc639 137 Gene3D G3DSA:1.20.1290.10 4 130 2.8E-26 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATY42_RS02290 f489dd6365e944e39c8fa281741fc639 137 SUPERFAMILY SSF69118 2 127 6.41E-37 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATY42_RS02290 f489dd6365e944e39c8fa281741fc639 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 6.6E-25 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATY42_RS02290 f489dd6365e944e39c8fa281741fc639 137 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 9.7E-59 T 11-11-2016 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 ATY42_RS20070 abe9fd9b019beabfb8603a18638bf10e 78 Pfam PF13627 Prokaryotic lipoprotein-attachment site 11 33 1.4E-6 T 11-11-2016 IPR032831 Prokaryotic lipoprotein-attachment site ATY42_RS04355 9958404364cfaab8cabf30c4a3de20b5 460 Pfam PF13546 DDE superfamily endonuclease 39 312 1.0E-90 T 11-11-2016 ATY42_RS04355 9958404364cfaab8cabf30c4a3de20b5 460 SUPERFAMILY SSF53098 39 424 6.22E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 Gene3D G3DSA:1.25.40.10 174 388 1.3E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 SMART SM00028 106 139 150.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 SMART SM00028 320 353 15.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 SMART SM00028 179 212 0.087 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 SMART SM00028 354 386 120.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 Pfam PF09295 ChAPs (Chs5p-Arf1p-binding proteins) 144 252 5.6E-5 T 11-11-2016 IPR015374 Chs5p-Arf1p binding ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 Pfam PF13181 Tetratricopeptide repeat 111 136 0.089 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 SUPERFAMILY SSF48452 319 382 1.39E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS00035 39d92686b1b9d73cfee63986c3391d36 397 SUPERFAMILY SSF48452 107 274 3.79E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS00165 99b8410151a7103015f035c9fe621d66 176 SUPERFAMILY SSF52540 40 156 2.55E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00165 99b8410151a7103015f035c9fe621d66 176 Gene3D G3DSA:3.40.50.300 43 158 1.2E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13510 6819e6262b396103c08af210ab0198df 191 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 5 111 4.1E-53 T 11-11-2016 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 ATY42_RS13510 6819e6262b396103c08af210ab0198df 191 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 6 65 7.1E-28 T 11-11-2016 IPR012909 PHA accumulation regulator DNA-binding, N-terminal ATY42_RS13510 6819e6262b396103c08af210ab0198df 191 Pfam PF05233 PHB accumulation regulatory domain 70 109 1.5E-18 T 11-11-2016 IPR007897 PHB accumulation regulatory ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 738 894 7.9E-33 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 20 508 3.3E-71 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 Pfam PF05954 Phage late control gene D protein (GPD) 28 343 2.0E-72 T 11-11-2016 ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 Gene3D G3DSA:2.40.50.230 416 503 2.2E-29 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 573 677 8.7E-33 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 SUPERFAMILY SSF69279 218 344 1.21E-9 T 11-11-2016 ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 SUPERFAMILY SSF69279 381 398 1.21E-9 T 11-11-2016 ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 SUPERFAMILY SSF69279 15 192 3.8E-45 T 11-11-2016 ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 Gene3D G3DSA:3.55.50.10 96 196 4.1E-27 T 11-11-2016 ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 SUPERFAMILY SSF69255 409 503 7.85E-25 T 11-11-2016 ATY42_RS17660 cb1656d33898c3640bbae5a9f5e36633 979 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 20 507 2.5E-83 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS21730 632ccc59686024b68239be176faf8b69 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 123 153 0.004 T 11-11-2016 ATY42_RS21730 632ccc59686024b68239be176faf8b69 153 Pfam PF04191 Phospholipid methyltransferase 39 136 7.4E-14 T 11-11-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 6.8E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 6.8E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 6.8E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.8E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 6.8E-23 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.9E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.9E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 4.9E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 Gene3D G3DSA:3.40.50.720 2 232 9.7E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 Pfam PF00106 short chain dehydrogenase 3 187 1.2E-51 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02315 0f3a93a1d07bc62ab45335c0614244b3 251 SUPERFAMILY SSF51735 3 227 2.47E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03000 67a327b970bc6dd26e82d4214797c595 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS03000 67a327b970bc6dd26e82d4214797c595 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS03000 67a327b970bc6dd26e82d4214797c595 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02690 67a327b970bc6dd26e82d4214797c595 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS02690 67a327b970bc6dd26e82d4214797c595 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02690 67a327b970bc6dd26e82d4214797c595 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10165 67a327b970bc6dd26e82d4214797c595 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS10165 67a327b970bc6dd26e82d4214797c595 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10165 67a327b970bc6dd26e82d4214797c595 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS18395 99a089b72c8a851f347820d7dfa950d6 143 Pfam PF14760 Rnk N-terminus 15 50 2.8E-7 T 11-11-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain ATY42_RS18395 99a089b72c8a851f347820d7dfa950d6 143 SUPERFAMILY SSF54534 56 122 3.14E-12 T 11-11-2016 ATY42_RS18395 99a089b72c8a851f347820d7dfa950d6 143 Gene3D G3DSA:3.10.50.30 53 141 9.6E-22 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATY42_RS18395 99a089b72c8a851f347820d7dfa950d6 143 Gene3D G3DSA:1.10.286.20 12 50 2.4E-8 T 11-11-2016 ATY42_RS18395 99a089b72c8a851f347820d7dfa950d6 143 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 58 131 8.5E-13 T 11-11-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ATY42_RS18825 f35a714abedd0cc186985032aa3428d6 270 SUPERFAMILY SSF53474 8 188 1.42E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS18825 f35a714abedd0cc186985032aa3428d6 270 Gene3D G3DSA:3.40.50.1820 9 195 1.1E-22 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS11225 f6e86580d39430d2420ff30d37435b15 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS06015 c7e09641d2bc7448927b03fe89e77363 200 SUPERFAMILY SSF53098 110 200 9.71E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06015 c7e09641d2bc7448927b03fe89e77363 200 Pfam PF13276 HTH-like domain 37 92 2.2E-15 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS06015 c7e09641d2bc7448927b03fe89e77363 200 Gene3D G3DSA:3.30.420.10 111 200 2.1E-17 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06015 c7e09641d2bc7448927b03fe89e77363 200 Pfam PF00665 Integrase core domain 118 200 1.1E-16 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 588 621 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 186 642 5.7E-158 T 11-11-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 Pfam PF03958 Bacterial type II/III secretion system short domain 286 371 1.1E-14 T 11-11-2016 IPR005644 NolW-like ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 630 644 1.0E-16 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 474 498 1.0E-16 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 607 625 1.0E-16 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 PRINTS PR00811 Bacterial general secretion pathway protein D signature 371 381 1.0E-16 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 Pfam PF07660 Secretin and TonB N terminus short domain 212 258 2.6E-8 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 Pfam PF00263 Bacterial type II and III secretion system protein 478 643 8.6E-50 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 ATY42_RS05665 1520b08bec45a68b48e864fd87741184 649 SMART SM00965 211 259 2.0E-10 T 11-11-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 ATY42_RS17035 d8cf4b2e99f5e9798dc298979f0754e3 667 Gene3D G3DSA:2.40.170.20 153 667 8.6E-73 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS17035 d8cf4b2e99f5e9798dc298979f0754e3 667 Gene3D G3DSA:2.170.130.10 17 152 2.3E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS17035 d8cf4b2e99f5e9798dc298979f0754e3 667 Pfam PF00593 TonB dependent receptor 425 664 1.5E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS17035 d8cf4b2e99f5e9798dc298979f0754e3 667 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 150 1.2E-18 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS17035 d8cf4b2e99f5e9798dc298979f0754e3 667 SUPERFAMILY SSF56935 18 667 3.66E-94 T 11-11-2016 ATY42_RS07470 d1c195a708098e47fd26b82e2f0f0794 212 Gene3D G3DSA:1.20.1050.10 90 205 1.8E-29 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS07470 d1c195a708098e47fd26b82e2f0f0794 212 SUPERFAMILY SSF52833 6 85 2.55E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS07470 d1c195a708098e47fd26b82e2f0f0794 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 7 82 6.6E-14 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS07470 d1c195a708098e47fd26b82e2f0f0794 212 SUPERFAMILY SSF47616 83 202 9.01E-26 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS07470 d1c195a708098e47fd26b82e2f0f0794 212 Gene3D G3DSA:3.40.30.10 8 89 6.0E-23 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS07470 d1c195a708098e47fd26b82e2f0f0794 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 114 199 4.0E-9 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 25 420 4.8E-32 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 SUPERFAMILY SSF53474 440 695 8.11E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 SUPERFAMILY SSF50993 27 434 8.11E-59 T 11-11-2016 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 Gene3D G3DSA:3.40.50.1820 359 695 1.5E-91 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 555 575 8.2E-42 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 609 624 8.2E-42 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 628 650 8.2E-42 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 470 488 8.2E-42 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 497 521 8.2E-42 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 525 544 8.2E-42 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20100 2e1effe957d1ba6128d9eb6c6bf374f3 697 Pfam PF00326 Prolyl oligopeptidase family 494 695 3.4E-48 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS06880 261e6ee91f05378570f39e8922b02071 254 SUPERFAMILY SSF52540 2 243 3.19E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06880 261e6ee91f05378570f39e8922b02071 254 SMART SM00382 26 230 7.2E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06880 261e6ee91f05378570f39e8922b02071 254 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 242 2.1E-110 T 11-11-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 ATY42_RS06880 261e6ee91f05378570f39e8922b02071 254 Pfam PF00005 ABC transporter 17 172 1.3E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS06880 261e6ee91f05378570f39e8922b02071 254 Gene3D G3DSA:3.40.50.300 1 242 1.7E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 11-11-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 Gene3D G3DSA:3.20.20.100 1 260 1.9E-86 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 11-11-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 PIRSF PIRSF000097 1 266 1.4E-64 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 9.7E-45 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 9.7E-45 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 9.7E-45 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 9.7E-45 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 9.7E-45 T 11-11-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 Pfam PF00248 Aldo/keto reductase family 8 250 7.2E-46 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS22730 35b559ad7cd2f820b5c507be669d12ad 267 SUPERFAMILY SSF51430 2 259 7.99E-80 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS13450 884f3ce23611f77691f332241d50d1c1 186 Gene3D G3DSA:3.40.50.2020 20 181 4.4E-57 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS13450 884f3ce23611f77691f332241d50d1c1 186 Pfam PF00156 Phosphoribosyl transferase domain 65 164 1.3E-16 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATY42_RS13450 884f3ce23611f77691f332241d50d1c1 186 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 20 182 1.0E-57 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 ATY42_RS13450 884f3ce23611f77691f332241d50d1c1 186 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 18 186 32.764 T 11-11-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|Reactome: R-HSA-74217 ATY42_RS13450 884f3ce23611f77691f332241d50d1c1 186 SUPERFAMILY SSF53271 20 178 2.49E-44 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS15735 74ecee8bd95a198fb79b66355baeba2a 538 Gene3D G3DSA:3.40.605.10 5 269 5.6E-41 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS15735 74ecee8bd95a198fb79b66355baeba2a 538 SUPERFAMILY SSF53720 30 490 1.57E-73 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS15735 74ecee8bd95a198fb79b66355baeba2a 538 Pfam PF00171 Aldehyde dehydrogenase family 24 429 4.7E-45 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS15735 74ecee8bd95a198fb79b66355baeba2a 538 Gene3D G3DSA:3.40.309.10 271 461 3.4E-49 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 Gene3D G3DSA:1.20.1560.10 8 329 1.3E-25 T 11-11-2016 ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 Pfam PF00664 ABC transporter transmembrane region 66 263 2.0E-5 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 Gene3D G3DSA:3.40.50.300 341 553 1.6E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 SUPERFAMILY SSF52540 336 553 5.62E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 8 536 8.6E-120 T 11-11-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 SMART SM00382 368 560 7.0E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 Pfam PF00005 ABC transporter 359 506 7.8E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS13140 58fb925044e32dfbfbfb6b4b49830718 561 SUPERFAMILY SSF90123 7 330 1.44E-32 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 229 44.662 T 11-11-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 247 1.2E-121 T 11-11-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 SMART SM00855 4 190 5.8E-26 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 Gene3D G3DSA:3.40.50.1240 2 249 1.8E-96 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 139 209 4.6E-5 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 124 5.2E-29 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 SUPERFAMILY SSF53254 2 246 2.23E-78 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS07220 c1d4736d6e0e7b63752cf6622cacc53a 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 11-11-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 ATY42_RS07935 54443069b9fde0290532667b8b88eae1 247 SUPERFAMILY SSF88946 18 109 9.42E-16 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS07935 54443069b9fde0290532667b8b88eae1 247 Pfam PF04542 Sigma-70 region 2 43 94 3.8E-9 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS07935 54443069b9fde0290532667b8b88eae1 247 Gene3D G3DSA:1.10.1740.10 31 114 1.5E-16 T 11-11-2016 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 6 455 43.843 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 SUPERFAMILY SSF52540 8 453 2.26E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 SMART SM00382 54 344 3.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 347 415 1.2E-6 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 58 107 1.9E-6 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Gene3D G3DSA:3.40.50.300 255 343 2.3E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Gene3D G3DSA:3.40.50.300 9 115 2.3E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Gene3D G3DSA:1.10.8.10 116 188 7.1E-28 T 11-11-2016 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Gene3D G3DSA:1.10.8.10 223 253 7.1E-28 T 11-11-2016 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 SMART SM01086 347 446 9.0E-25 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 455 1.2E-203 T 11-11-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Gene3D G3DSA:1.10.8.60 347 455 2.5E-36 T 11-11-2016 ATY42_RS20040 045d1fc196727d6fecbe3b82bd551971 455 Pfam PF07724 AAA domain (Cdc48 subfamily) 195 341 9.6E-41 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Pfam PF00696 Amino acid kinase family 10 291 1.2E-39 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 SUPERFAMILY SSF55021 313 405 7.1E-12 T 11-11-2016 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PIRSF PIRSF036459 1 869 0.0 T 11-11-2016 IPR011246 Bifunctional diaminopimelate decarboxylase/aspartate kinase ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 695 711 - T 11-11-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 10 460 1.2E-82 T 11-11-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 504 861 3.3E-91 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 664 677 2.3E-22 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 535 553 2.3E-22 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 843 856 2.3E-22 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 742 761 2.3E-22 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 555 567 2.3E-22 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 SUPERFAMILY SSF55021 389 460 1.22E-9 T 11-11-2016 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 770 788 1.8E-12 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 639 648 1.8E-12 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 553 570 1.8E-12 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 PRINTS PR01181 Diaminopimelate decarboxylase signature 853 869 1.8E-12 T 11-11-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 SUPERFAMILY SSF50621 732 864 3.14E-40 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 517 752 4.4E-43 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 ProSitePatterns PS00324 Aspartokinase signature. 12 20 - T 11-11-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 535 553 - T 11-11-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 SUPERFAMILY SSF51419 506 754 7.27E-55 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Gene3D G3DSA:3.40.1160.10 8 60 2.3E-55 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Gene3D G3DSA:3.40.1160.10 110 308 2.3E-55 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 772 861 4.0E-14 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Gene3D G3DSA:3.20.20.10 521 742 4.0E-58 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 SUPERFAMILY SSF53633 9 305 6.05E-57 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS07045 a3fd28ba43a47a1ff0d108dbda473c31 869 Gene3D G3DSA:2.40.37.10 743 864 5.1E-38 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS20890 e602c73684f03705c1b1a660adcaf06b 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS20890 e602c73684f03705c1b1a660adcaf06b 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20890 e602c73684f03705c1b1a660adcaf06b 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01560 e602c73684f03705c1b1a660adcaf06b 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS01560 e602c73684f03705c1b1a660adcaf06b 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01560 e602c73684f03705c1b1a660adcaf06b 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 SUPERFAMILY SSF52283 190 237 1.25E-112 T 11-11-2016 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 SUPERFAMILY SSF52283 10 153 1.25E-112 T 11-11-2016 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 SUPERFAMILY SSF52283 401 480 1.25E-112 T 11-11-2016 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 11-11-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Gene3D G3DSA:3.40.50.720 277 359 3.1E-14 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 479 6.3E-146 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Gene3D G3DSA:3.40.50.1480 366 480 3.7E-37 T 11-11-2016 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 PIRSF PIRSF001109 1 480 8.2E-190 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 260 277 - T 11-11-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 SMART SM00997 238 400 9.3E-110 T 11-11-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 472 47.736 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 472 9.0E-186 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 SMART SM00996 12 479 0.0 T 11-11-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 SUPERFAMILY SSF51735 238 400 1.4E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Gene3D G3DSA:3.40.50.1480 189 276 1.3E-117 T 11-11-2016 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Gene3D G3DSA:3.40.50.1480 11 152 1.3E-117 T 11-11-2016 ATY42_RS19110 3e2166508fc1d3302d979aed01614bc0 480 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 238 400 6.8E-81 T 11-11-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 ATY42_RS22325 1af6c42f4da9a7a4b7517c5ed97131dd 368 Gene3D G3DSA:3.20.20.450 122 360 9.0E-82 T 11-11-2016 IPR001633 EAL domain ATY42_RS22325 1af6c42f4da9a7a4b7517c5ed97131dd 368 Pfam PF00563 EAL domain 122 349 1.5E-63 T 11-11-2016 IPR001633 EAL domain ATY42_RS22325 1af6c42f4da9a7a4b7517c5ed97131dd 368 SUPERFAMILY SSF141868 122 362 1.1E-75 T 11-11-2016 IPR001633 EAL domain ATY42_RS22325 1af6c42f4da9a7a4b7517c5ed97131dd 368 SMART SM00052 111 355 2.0E-92 T 11-11-2016 IPR001633 EAL domain ATY42_RS05595 9b3a390b29fa79ae7f12084abc5056f6 99 SUPERFAMILY SSF63562 1 77 1.96E-24 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 ATY42_RS05595 9b3a390b29fa79ae7f12084abc5056f6 99 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 17.573 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS05595 9b3a390b29fa79ae7f12084abc5056f6 99 SMART SM01409 8 62 7.7E-16 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 ATY42_RS05595 9b3a390b29fa79ae7f12084abc5056f6 99 Gene3D G3DSA:3.90.940.10 1 77 1.4E-16 T 11-11-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 ATY42_RS05595 9b3a390b29fa79ae7f12084abc5056f6 99 Pfam PF01192 RNA polymerase Rpb6 8 60 1.1E-15 T 11-11-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 ATY42_RS05595 9b3a390b29fa79ae7f12084abc5056f6 99 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 3.3E-20 T 11-11-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS20305 9fec06faf7b3ba4ecf51233c9d804b58 363 Pfam PF07759 Protein of unknown function (DUF1615) 48 362 1.3E-136 T 11-11-2016 IPR011673 Protein of unknown function DUF1615 ATY42_RS20305 9fec06faf7b3ba4ecf51233c9d804b58 363 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 20 363 0.0 T 11-11-2016 IPR011673 Protein of unknown function DUF1615 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 SMART SM00354 37 107 5.7E-18 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 SUPERFAMILY SSF53822 95 351 2.78E-58 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 Gene3D G3DSA:3.40.50.2300 209 345 1.5E-40 T 11-11-2016 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 Pfam PF00356 Bacterial regulatory proteins, lacI family 39 84 1.5E-10 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 SUPERFAMILY SSF47413 37 95 1.02E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 Gene3D G3DSA:1.10.260.40 37 86 6.1E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 Gene3D G3DSA:3.40.50.2300 87 208 1.7E-35 T 11-11-2016 ATY42_RS10060 1b712d0f7f1f44e0f3e2153037ebf533 391 Pfam PF13377 Periplasmic binding protein-like domain 207 364 1.1E-31 T 11-11-2016 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.9E-15 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.6E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.6E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.6E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 Pfam PF03466 LysR substrate binding domain 89 292 1.9E-37 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 Gene3D G3DSA:1.10.10.10 1 86 1.3E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 SUPERFAMILY SSF53850 91 297 1.69E-35 T 11-11-2016 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 Gene3D G3DSA:3.40.190.10 275 287 2.5E-14 T 11-11-2016 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 Gene3D G3DSA:3.40.190.10 90 175 2.5E-14 T 11-11-2016 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 Gene3D G3DSA:3.40.190.10 176 261 3.8E-18 T 11-11-2016 ATY42_RS17070 e417fc682a20c2677e52897501430e6a 327 SUPERFAMILY SSF46785 1 88 2.94E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15135 dad754e4a0d63a44fe91a7f3dab655d3 370 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 365 1.8E-82 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS15135 dad754e4a0d63a44fe91a7f3dab655d3 370 SUPERFAMILY SSF111369 51 292 8.89E-68 T 11-11-2016 ATY42_RS15135 dad754e4a0d63a44fe91a7f3dab655d3 370 Gene3D G3DSA:2.40.50.100 174 200 5.5E-22 T 11-11-2016 ATY42_RS15135 dad754e4a0d63a44fe91a7f3dab655d3 370 Gene3D G3DSA:2.40.50.100 63 96 5.5E-22 T 11-11-2016 ATY42_RS15135 dad754e4a0d63a44fe91a7f3dab655d3 370 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 286 6.7E-14 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS15135 dad754e4a0d63a44fe91a7f3dab655d3 370 Gene3D G3DSA:1.20.1600.10 104 173 6.7E-5 T 11-11-2016 ATY42_RS03505 9739708c5e21460f817c9602482e5fc2 100 SUPERFAMILY SSF81333 12 86 3.27E-17 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ATY42_RS03505 9739708c5e21460f817c9602482e5fc2 100 ProSitePatterns PS00605 ATP synthase c subunit signature. 47 68 - T 11-11-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210 ATY42_RS03505 9739708c5e21460f817c9602482e5fc2 100 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 27 84 7.0E-23 T 11-11-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ATY42_RS03505 9739708c5e21460f817c9602482e5fc2 100 Gene3D G3DSA:1.20.20.10 11 86 1.2E-30 T 11-11-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210 ATY42_RS03505 9739708c5e21460f817c9602482e5fc2 100 Pfam PF00137 ATP synthase subunit C 18 80 2.9E-8 T 11-11-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ATY42_RS03505 9739708c5e21460f817c9602482e5fc2 100 Hamap MF_01396 ATP synthase subunit c [atpH]. 16 84 14.499 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 185 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 443 450 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 280 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 565 585 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 478 499 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 414 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 543 558 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 137 159 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 332 4.0E-69 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 171 181 - T 11-11-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Gene3D G3DSA:3.50.50.60 136 271 4.1E-38 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 SUPERFAMILY SSF55424 480 601 5.67E-39 T 11-11-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 1.0E-39 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 157 1.0E-39 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 428 450 1.0E-39 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 399 415 1.0E-39 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 286 1.0E-39 T 11-11-2016 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Gene3D G3DSA:3.50.50.60 272 469 3.8E-55 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Gene3D G3DSA:3.30.390.30 470 597 7.6E-45 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 137 463 1.4E-67 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 SUPERFAMILY SSF51905 136 516 1.09E-60 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 482 590 4.4E-35 T 11-11-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 SUPERFAMILY SSF51230 2 95 1.31E-22 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 137 594 2.0E-152 T 11-11-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Pfam PF00364 Biotin-requiring enzyme 5 74 2.9E-19 T 11-11-2016 IPR000089 Biotin/lipoyl attachment ATY42_RS03480 8501723f7d4f4e0052831d05168e9301 607 Gene3D G3DSA:2.40.50.100 4 81 4.8E-21 T 11-11-2016 ATY42_RS14240 940d4bb548992fc17aa645e43346cf4a 160 Pfam PF01584 CheW-like domain 13 149 1.1E-39 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14240 940d4bb548992fc17aa645e43346cf4a 160 Gene3D G3DSA:2.30.30.40 90 140 1.3E-7 T 11-11-2016 ATY42_RS14240 940d4bb548992fc17aa645e43346cf4a 160 Gene3D G3DSA:2.40.50.180 51 89 1.3E-10 T 11-11-2016 ATY42_RS14240 940d4bb548992fc17aa645e43346cf4a 160 SUPERFAMILY SSF50341 12 150 7.06E-42 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14240 940d4bb548992fc17aa645e43346cf4a 160 SMART SM00260 9 146 4.2E-45 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS06330 c86f50044938cd847d56c952a6f9dab2 75 SUPERFAMILY SSF82657 3 74 5.62E-24 T 11-11-2016 IPR002634 BolA protein ATY42_RS06330 c86f50044938cd847d56c952a6f9dab2 75 Gene3D G3DSA:3.30.300.90 2 74 4.4E-24 T 11-11-2016 IPR002634 BolA protein ATY42_RS06330 c86f50044938cd847d56c952a6f9dab2 75 Pfam PF01722 BolA-like protein 20 74 3.8E-19 T 11-11-2016 IPR002634 BolA protein ATY42_RS06330 c86f50044938cd847d56c952a6f9dab2 75 PIRSF PIRSF003113 1 75 1.6E-22 T 11-11-2016 IPR002634 BolA protein ATY42_RS13160 d9489b6f5636392a0a106948b76474fc 85 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 66 3.6E-20 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 SUPERFAMILY SSF53927 16 271 3.31E-81 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 Gene3D G3DSA:3.40.140.10 135 273 7.8E-53 T 11-11-2016 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 Pfam PF02634 FdhD/NarQ family 34 271 2.8E-80 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 Gene3D G3DSA:3.10.20.10 36 121 1.5E-27 T 11-11-2016 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 PIRSF PIRSF015626 1 274 1.5E-86 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 30 272 2.2E-67 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 ATY42_RS13835 7630a5a1334924cce3e45b619d785b23 281 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 12 272 34.914 T 11-11-2016 IPR003786 Protein FdhD GO:0016783 ATY42_RS08450 caa08c2b8cb521bf6c12b29b2ef4a006 291 SUPERFAMILY SSF74653 178 285 1.22E-20 T 11-11-2016 ATY42_RS08450 caa08c2b8cb521bf6c12b29b2ef4a006 291 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 206 281 3.3E-18 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS08450 caa08c2b8cb521bf6c12b29b2ef4a006 291 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 272 1.4E-15 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS08450 caa08c2b8cb521bf6c12b29b2ef4a006 291 Gene3D G3DSA:3.30.1150.10 179 285 9.9E-23 T 11-11-2016 ATY42_RS01150 52582b1b04c51d52a1cd2b9a1f7425ff 185 Gene3D G3DSA:3.40.1400.10 3 175 2.2E-74 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATY42_RS01150 52582b1b04c51d52a1cd2b9a1f7425ff 185 Pfam PF12408 Ribose-5-phosphate isomerase 129 174 1.1E-20 T 11-11-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal ATY42_RS01150 52582b1b04c51d52a1cd2b9a1f7425ff 185 Pfam PF02502 Ribose/Galactose Isomerase 8 102 3.2E-23 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATY42_RS01150 52582b1b04c51d52a1cd2b9a1f7425ff 185 SUPERFAMILY SSF89623 7 127 1.44E-29 T 11-11-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ATY42_RS22585 5a1fd294c6cca6081c78092aefe490d4 329 PIRSF PIRSF005211 1 329 3.9E-71 T 11-11-2016 IPR012020 AB hydrolase 4 family ATY42_RS22585 5a1fd294c6cca6081c78092aefe490d4 329 Gene3D G3DSA:3.40.50.1820 67 184 6.3E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22585 5a1fd294c6cca6081c78092aefe490d4 329 Gene3D G3DSA:3.40.50.1820 258 308 6.3E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22585 5a1fd294c6cca6081c78092aefe490d4 329 SUPERFAMILY SSF53474 41 184 1.77E-35 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22585 5a1fd294c6cca6081c78092aefe490d4 329 SUPERFAMILY SSF53474 259 321 1.77E-35 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22585 5a1fd294c6cca6081c78092aefe490d4 329 Pfam PF12697 Alpha/beta hydrolase family 72 317 1.1E-11 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 22 286 2.0E-9 T 11-11-2016 IPR001087 GDSL lipase/esterase GO:0016788 ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 Gene3D G3DSA:3.40.50.1110 6 294 5.6E-73 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 Pfam PF03797 Autotransporter beta-domain 330 571 3.0E-43 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 PIRSF PIRSF037375 1 594 9.1E-206 T 11-11-2016 IPR017186 Lipase, autotransporter EstA ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 SUPERFAMILY SSF103515 307 563 9.42E-33 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 Gene3D G3DSA:2.40.128.130 299 575 4.5E-44 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 SMART SM00869 327 584 5.9E-32 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 SUPERFAMILY SSF52266 20 229 6.83E-16 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS16870 8700a6432ceb191fab72c90d466a2bc0 594 SUPERFAMILY SSF52266 263 292 6.83E-16 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS12760 a0fb6f910dbc4093c813a2180c25bf84 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 172 246 6.7E-22 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATY42_RS12760 a0fb6f910dbc4093c813a2180c25bf84 251 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 227 2.7E-55 T 11-11-2016 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 ATY42_RS12760 a0fb6f910dbc4093c813a2180c25bf84 251 SUPERFAMILY SSF117143 77 208 1.96E-14 T 11-11-2016 ATY42_RS12760 a0fb6f910dbc4093c813a2180c25bf84 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 121 1.1E-35 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ATY42_RS12760 a0fb6f910dbc4093c813a2180c25bf84 251 Pfam PF00460 Flagella basal body rod protein 5 35 1.4E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 91 114 - T 11-11-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 410 29.264 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 Gene3D G3DSA:3.40.50.720 155 302 8.0E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 407 4.3E-18 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 SUPERFAMILY SSF69075 309 409 8.63E-23 T 11-11-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 SUPERFAMILY SSF51735 154 306 8.71E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 164 297 6.8E-47 T 11-11-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 148 2.8E-47 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 401 1.4E-122 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 SUPERFAMILY SSF69742 1 149 9.15E-47 T 11-11-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS18180 0db6e18142c2519ad4296ebfc1db2e40 432 PIRSF PIRSF000445 1 417 4.1E-146 T 11-11-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ATY42_RS20955 2695cc80a23e974fe74e83a78e80b4cd 265 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 35.865 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ATY42_RS20955 2695cc80a23e974fe74e83a78e80b4cd 265 SUPERFAMILY SSF51366 12 262 4.47E-89 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS20955 2695cc80a23e974fe74e83a78e80b4cd 265 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 1.1E-93 T 11-11-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ATY42_RS20955 2695cc80a23e974fe74e83a78e80b4cd 265 Gene3D G3DSA:3.20.20.70 1 263 2.9E-106 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS20955 2695cc80a23e974fe74e83a78e80b4cd 265 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 11-11-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 ATY42_RS09250 e0f414e234e7a7908bbba7c07772c662 151 Pfam PF09537 Domain of unknown function (DUF2383) 7 114 4.1E-30 T 11-11-2016 IPR019052 Domain of unknown function DUF2383 ATY42_RS09250 e0f414e234e7a7908bbba7c07772c662 151 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 7 144 3.0E-55 T 11-11-2016 IPR011971 Conserved hypothetical protein CHP02284 ATY42_RS09250 e0f414e234e7a7908bbba7c07772c662 151 Gene3D G3DSA:1.20.1260.10 11 46 7.1E-4 T 11-11-2016 IPR012347 Ferritin-related ATY42_RS08935 6bd377133d0e861d3c76dfdedee5737b 265 Gene3D G3DSA:3.90.226.10 12 203 5.3E-64 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08935 6bd377133d0e861d3c76dfdedee5737b 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ATY42_RS08935 6bd377133d0e861d3c76dfdedee5737b 265 SUPERFAMILY SSF52096 12 264 1.84E-76 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08935 6bd377133d0e861d3c76dfdedee5737b 265 Gene3D G3DSA:1.10.12.10 208 264 8.7E-18 T 11-11-2016 IPR014748 Crontonase, C-terminal ATY42_RS08935 6bd377133d0e861d3c76dfdedee5737b 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 264 1.7E-54 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS15400 1512634f2114bc5d75e2cfec1bec04e5 140 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 43 120 2.9E-20 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS15400 1512634f2114bc5d75e2cfec1bec04e5 140 Gene3D G3DSA:3.30.1150.10 38 121 6.7E-15 T 11-11-2016 ATY42_RS15400 1512634f2114bc5d75e2cfec1bec04e5 140 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 45 121 1.3E-19 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS15400 1512634f2114bc5d75e2cfec1bec04e5 140 SUPERFAMILY SSF74653 39 119 4.19E-20 T 11-11-2016 ATY42_RS17490 79b9a921df1d6b7f9c1c98567a6917c7 611 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 4 610 3.7E-218 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like ATY42_RS17490 79b9a921df1d6b7f9c1c98567a6917c7 611 PIRSF PIRSF028304 1 610 4.5E-181 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like ATY42_RS17490 79b9a921df1d6b7f9c1c98567a6917c7 611 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 5 608 9.7E-203 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 372 380 - T 11-11-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 ProSitePatterns PS00438 Catalase proximal active site signature. 78 94 - T 11-11-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PRINTS PR00067 Catalase signature 139 156 1.2E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PRINTS PR00067 Catalase signature 327 354 1.2E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PRINTS PR00067 Catalase signature 55 78 1.2E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PRINTS PR00067 Catalase signature 158 176 1.2E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PRINTS PR00067 Catalase signature 118 136 1.2E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PRINTS PR00067 Catalase signature 359 385 1.2E-68 T 11-11-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 SMART SM01060 42 430 6.1E-276 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 SUPERFAMILY SSF56634 35 529 1.57E-215 T 11-11-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 Pfam PF00199 Catalase 42 427 8.8E-178 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 SUPERFAMILY SSF52317 553 671 7.56E-13 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 Gene3D G3DSA:2.40.180.10 31 397 3.3E-175 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 Pfam PF06628 Catalase-related immune-responsive 456 518 6.5E-21 T 11-11-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 Gene3D G3DSA:3.40.50.880 555 700 4.1E-39 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS17145 a0c444647d894cea30866c7a29537f4d 701 PIRSF PIRSF038927 13 699 2.5E-294 T 11-11-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ATY42_RS00700 20b1bf6a56018c52ed483362d6040e40 83 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 29 79 7.6E-21 T 11-11-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 ATY42_RS11480 b9d34b9e03396055885bf8543e4099c5 638 SUPERFAMILY SSF143975 3 420 3.92E-136 T 11-11-2016 ATY42_RS11480 b9d34b9e03396055885bf8543e4099c5 638 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS11480 b9d34b9e03396055885bf8543e4099c5 638 SUPERFAMILY SSF52016 421 601 1.57E-51 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS11480 b9d34b9e03396055885bf8543e4099c5 638 Pfam PF00920 Dehydratase family 68 599 2.7E-149 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS11480 b9d34b9e03396055885bf8543e4099c5 638 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 4 602 6.1E-269 T 11-11-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 ATY42_RS11480 b9d34b9e03396055885bf8543e4099c5 638 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS08950 6fc889f277c204d7ab817aa76aa8ff6a 321 SUPERFAMILY SSF161111 16 210 2.48E-55 T 11-11-2016 ATY42_RS08950 6fc889f277c204d7ab817aa76aa8ff6a 321 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 288 1.6E-85 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATY42_RS08950 6fc889f277c204d7ab817aa76aa8ff6a 321 Gene3D G3DSA:1.20.1510.10 16 209 2.3E-59 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain ATY42_RS08950 6fc889f277c204d7ab817aa76aa8ff6a 321 SUPERFAMILY SSF160240 215 287 6.02E-11 T 11-11-2016 ATY42_RS08950 6fc889f277c204d7ab817aa76aa8ff6a 321 Gene3D G3DSA:3.30.70.1350 218 286 4.3E-5 T 11-11-2016 IPR027470 Cation efflux protein, cytoplasmic domain ATY42_RS08950 6fc889f277c204d7ab817aa76aa8ff6a 321 Pfam PF01545 Cation efflux family 19 209 3.3E-46 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATY42_RS03765 0b1978ff67e0eca63d5a515eccd63183 358 Gene3D G3DSA:3.90.25.10 221 341 2.0E-20 T 11-11-2016 ATY42_RS03765 0b1978ff67e0eca63d5a515eccd63183 358 Gene3D G3DSA:3.40.50.720 2 220 5.2E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03765 0b1978ff67e0eca63d5a515eccd63183 358 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 277 9.2E-39 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ATY42_RS03765 0b1978ff67e0eca63d5a515eccd63183 358 SUPERFAMILY SSF51735 170 355 3.71E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03765 0b1978ff67e0eca63d5a515eccd63183 358 SUPERFAMILY SSF51735 3 132 3.71E-62 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09735 1fdd9cf5dfcb839917d9e7d471a90ac6 244 Gene3D G3DSA:3.40.710.10 52 242 9.3E-36 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS09735 1fdd9cf5dfcb839917d9e7d471a90ac6 244 Pfam PF00144 Beta-lactamase 78 242 5.5E-31 T 11-11-2016 IPR001466 Beta-lactamase-related ATY42_RS09735 1fdd9cf5dfcb839917d9e7d471a90ac6 244 SUPERFAMILY SSF56601 63 242 4.1E-36 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 SMART SM00533 273 580 8.3E-89 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Pfam PF05192 MutS domain III 259 548 2.5E-34 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Gene3D G3DSA:3.40.50.300 558 792 8.9E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 SMART SM00534 596 788 6.4E-111 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 848 0.0 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 SUPERFAMILY SSF55271 1 105 1.57E-38 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Pfam PF00488 MutS domain V 599 791 1.2E-81 T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Pfam PF05190 MutS family domain IV 417 508 1.1E-28 T 11-11-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 SUPERFAMILY SSF52540 556 792 1.48E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Pfam PF01624 MutS domain I 1 109 4.4E-39 T 11-11-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Gene3D G3DSA:3.40.1170.10 1 110 3.5E-45 T 11-11-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 SUPERFAMILY SSF53150 104 255 4.05E-41 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Gene3D G3DSA:3.30.420.110 117 245 1.6E-40 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 677 693 - T 11-11-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Gene3D G3DSA:1.10.1420.10 307 466 1.2E-50 T 11-11-2016 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 SUPERFAMILY SSF48334 257 554 3.53E-82 T 11-11-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Pfam PF05188 MutS domain II 119 242 4.1E-29 T 11-11-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ATY42_RS08100 ddd9a78af8f23c9b410a45d0fce352df 851 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 843 24.305 T 11-11-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 Gene3D G3DSA:3.40.50.300 10 236 5.9E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 Gene3D G3DSA:3.30.1220.10 390 416 1.5E-12 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 Gene3D G3DSA:3.30.1220.10 249 327 1.5E-12 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 263 416 5.5E-22 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 SUPERFAMILY SSF52540 7 315 2.43E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 217 1.6E-56 T 11-11-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ATY42_RS22060 663a35337e8859eda7dbe2c7332bb053 441 SMART SM00833 263 416 5.3E-42 T 11-11-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 SUPERFAMILY SSF52467 10 273 6.16E-80 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Pfam PF02146 Sir2 family 27 229 4.1E-46 T 11-11-2016 IPR003000 Sirtuin family GO:0070403 ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Hamap MF_01967 NAD-dependent protein deacetylase [cobB]. 3 273 64.231 T 11-11-2016 IPR026587 Sirtuin, class II ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Gene3D G3DSA:3.30.1600.10 38 72 8.7E-20 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Gene3D G3DSA:3.30.1600.10 125 199 8.7E-20 T 11-11-2016 IPR026591 Sirtuin family, catalytic core small domain ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Gene3D G3DSA:3.40.50.1220 11 37 1.7E-40 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Gene3D G3DSA:3.40.50.1220 87 124 1.7E-40 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS21835 8486bf1462902b71d9439dc93017aff7 293 Gene3D G3DSA:3.40.50.1220 205 273 1.7E-40 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS01185 3d66a282dfd5882f9c3c7579931e34fa 337 Gene3D G3DSA:2.40.170.20 1 327 1.1E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01185 3d66a282dfd5882f9c3c7579931e34fa 337 SUPERFAMILY SSF56935 2 327 9.89E-35 T 11-11-2016 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 240 3.4E-16 T 11-11-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 11 218 5.7E-67 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 SUPERFAMILY SSF88697 244 300 1.17E-6 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 245 299 1.8E-11 T 11-11-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 180 1.1E-48 T 11-11-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 299 17.666 T 11-11-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 SUPERFAMILY SSF55120 9 223 6.33E-72 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS16160 9e16dac5de57dd02f9f694a0f56b613f 308 Gene3D G3DSA:2.30.130.10 242 300 1.9E-14 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 SMART SM00028 786 819 3.3 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 SMART SM00028 820 853 2.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 SMART SM00028 854 887 0.0073 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 SUPERFAMILY SSF52129 470 668 4.76E-18 T 11-11-2016 IPR029030 Caspase-like domain ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 ProSitePatterns PS00018 EF-hand calcium-binding domain. 671 683 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 Pfam PF00656 Caspase domain 476 671 5.1E-22 T 11-11-2016 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 SUPERFAMILY SSF48452 777 893 1.66E-22 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 Gene3D G3DSA:3.20.20.370 241 448 3.3E-50 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 SUPERFAMILY SSF88713 220 449 4.17E-48 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 Gene3D G3DSA:1.25.40.10 780 897 2.4E-24 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 Gene3D G3DSA:3.40.50.1460 475 624 1.3E-18 T 11-11-2016 IPR029030 Caspase-like domain ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 Pfam PF01522 Polysaccharide deacetylase 253 384 4.0E-24 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS23285 dfea1ebbf198ea053863644cf56f4ae8 900 Pfam PF13432 Tetratricopeptide repeat 829 886 1.3E-8 T 11-11-2016 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 11 286 5.0E-68 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 Gene3D G3DSA:3.40.50.150 105 282 1.2E-50 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 PIRSF PIRSF037167 1 303 2.0E-123 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 2 296 48.556 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 Gene3D G3DSA:1.10.8.10 11 101 2.8E-7 T 11-11-2016 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 200 206 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 Pfam PF05175 Methyltransferase small domain 131 213 9.2E-15 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 SUPERFAMILY SSF53335 12 289 8.51E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS16395 f9c66af5663134321a5728351cad0a45 308 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 9 290 9.7E-116 T 11-11-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:1.10.287.610 4 67 5.4E-26 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SUPERFAMILY SSF52113 758 834 5.05E-18 T 11-11-2016 IPR001357 BRCT domain ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-11-2016 IPR018239 NAD-dependent DNA ligase, active site ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:2.40.50.140 329 401 1.3E-32 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Pfam PF12826 Helix-hairpin-helix motif 585 648 2.7E-14 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SMART SM00532 4 458 2.5E-249 T 11-11-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SUPERFAMILY SSF50249 328 409 3.08E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 332 407 2.6E-33 T 11-11-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SUPERFAMILY SSF47781 671 740 7.94E-8 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:3.40.50.10190 759 836 5.3E-24 T 11-11-2016 IPR001357 BRCT domain ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:3.30.470.30 120 262 1.0E-46 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SUPERFAMILY SSF56091 5 326 1.13E-111 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:1.10.150.20 681 729 8.4E-7 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 502 1.0E-190 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Hamap MF_01588 DNA ligase [ligA]. 3 834 51.442 T 11-11-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 760 832 1.4E-12 T 11-11-2016 IPR001357 BRCT domain ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SMART SM00292 760 837 1.1E-11 T 11-11-2016 IPR001357 BRCT domain ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SUPERFAMILY SSF47781 414 500 9.64E-50 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 SUPERFAMILY SSF47781 566 657 9.64E-50 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:1.10.150.20 445 496 1.2E-19 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:1.10.150.20 562 578 1.2E-19 T 11-11-2016 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 7 328 1.1E-120 T 11-11-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 417 444 9.3E-12 T 11-11-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 ATY42_RS11965 7804e56fcbe6a9cabfb9adbc8fcc38bd 841 Gene3D G3DSA:1.10.150.20 579 657 6.8E-24 T 11-11-2016 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 Gene3D G3DSA:3.40.190.10 89 175 2.4E-24 T 11-11-2016 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 SUPERFAMILY SSF53850 88 295 5.02E-46 T 11-11-2016 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 Pfam PF03466 LysR substrate binding domain 87 289 2.2E-49 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.6E-21 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 Gene3D G3DSA:3.40.190.10 176 263 2.4E-31 T 11-11-2016 ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 Gene3D G3DSA:1.10.10.10 1 85 1.2E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18390 321d2b034eb2a912866327c06948fa8e 313 SUPERFAMILY SSF46785 1 111 1.8E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 Gene3D G3DSA:2.160.10.10 97 214 4.6E-29 T 11-11-2016 ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 6 211 2.3E-62 T 11-11-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 163 197 4.1E-6 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 108 143 8.1E-7 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 SUPERFAMILY SSF51161 4 218 2.36E-37 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 Gene3D G3DSA:3.40.50.720 5 91 3.7E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14985 3660ce3fd401b3b694503219781a04b4 223 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 11-11-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ATY42_RS00665 f55c4c58eda261222cede64e5ff0613f 417 SUPERFAMILY SSF111369 78 327 8.37E-24 T 11-11-2016 ATY42_RS00665 f55c4c58eda261222cede64e5ff0613f 417 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 81 322 1.5E-19 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS00665 f55c4c58eda261222cede64e5ff0613f 417 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 410 4.7E-52 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS00665 f55c4c58eda261222cede64e5ff0613f 417 Gene3D G3DSA:2.40.50.100 211 235 2.6E-15 T 11-11-2016 ATY42_RS00665 f55c4c58eda261222cede64e5ff0613f 417 Gene3D G3DSA:2.40.50.100 90 122 2.6E-15 T 11-11-2016 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 355 372 2.2E-48 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 398 417 2.2E-48 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.2E-48 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 2.2E-48 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 2.2E-48 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 2.2E-48 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 3.8E-221 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 4.5E-94 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 2.1E-115 T 11-11-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal ATY42_RS10460 557ef4f94d94beaf882e9babd49bfbfc 645 Pfam PF01578 Cytochrome C assembly protein 89 295 1.3E-51 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 1.4E-193 T 11-11-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 102 466 6.7E-131 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 SMART SM01230 102 379 4.8E-138 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 Gene3D G3DSA:3.30.590.10 106 456 6.2E-131 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 3.4E-29 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 SUPERFAMILY SSF54368 3 100 8.24E-36 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 SUPERFAMILY SSF55931 102 467 2.55E-131 T 11-11-2016 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 Gene3D G3DSA:3.10.20.70 3 105 1.1E-37 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS22550 a89027ea264f4e0b17e838fe86bb1d5c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-11-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATY42_RS04105 bea6834d06e40e5ce1b816d7b58943ac 283 SUPERFAMILY SSF158544 95 192 4.71E-23 T 11-11-2016 ATY42_RS04105 bea6834d06e40e5ce1b816d7b58943ac 283 Pfam PF03934 Type II secretion system (T2SS), protein K 31 222 1.6E-46 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ATY42_RS04105 bea6834d06e40e5ce1b816d7b58943ac 283 PIRSF PIRSF002786 1 279 8.9E-53 T 11-11-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 ATY42_RS04105 bea6834d06e40e5ce1b816d7b58943ac 283 Gene3D G3DSA:1.10.40.60 100 192 2.5E-23 T 11-11-2016 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 6.1E-81 T 11-11-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 2.3E-24 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 SMART SM01209 103 296 1.6E-139 T 11-11-2016 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 SUPERFAMILY SSF52440 1 103 6.47E-36 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Gene3D G3DSA:3.30.1490.20 122 190 9.5E-32 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 SMART SM01210 330 423 2.1E-44 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 SUPERFAMILY SSF56059 104 322 2.65E-67 T 11-11-2016 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 42.434 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-11-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.2E-34 T 11-11-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Gene3D G3DSA:3.30.470.20 191 328 1.4E-62 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 1.9E-172 T 11-11-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 SUPERFAMILY SSF51246 329 424 2.67E-27 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Gene3D G3DSA:3.40.50.20 2 95 1.1E-37 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS02570 4b16882631512687b1afa9a651ea850b 429 Gene3D G3DSA:3.90.600.10 331 423 5.6E-30 T 11-11-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 160 189 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 29 45 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 259 285 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 123 145 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 88 112 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 231 258 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PRINTS PR00073 Coprogen oxidase signature 46 67 4.0E-83 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 1 274 56.738 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 11-11-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 Pfam PF01218 Coproporphyrinogen III oxidase 6 298 8.3E-130 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 PIRSF PIRSF000166 2 299 3.4E-122 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 Gene3D G3DSA:3.40.1500.10 5 298 2.8E-128 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS21305 8efc1d4fc971b9719ac06b7140d8f458 299 SUPERFAMILY SSF102886 5 297 1.83E-130 T 11-11-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS05970 2daf16f8a7de5ffc971a3918e65d373d 167 Pfam PF01042 Endoribonuclease L-PSP 50 165 3.8E-15 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family ATY42_RS05970 2daf16f8a7de5ffc971a3918e65d373d 167 Gene3D G3DSA:3.30.1330.40 29 167 6.0E-29 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS05970 2daf16f8a7de5ffc971a3918e65d373d 167 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 141 160 - T 11-11-2016 IPR019897 RidA, conserved site ATY42_RS05970 2daf16f8a7de5ffc971a3918e65d373d 167 SUPERFAMILY SSF55298 30 167 5.03E-22 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 SUPERFAMILY SSF74653 144 220 8.24E-22 T 11-11-2016 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 146 223 5.3E-25 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 145 222 1.6E-22 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 PRINTS PR01217 Proline rich extensin signature 84 101 1.9E-10 T 11-11-2016 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 PRINTS PR01217 Proline rich extensin signature 46 67 1.9E-10 T 11-11-2016 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 PRINTS PR01217 Proline rich extensin signature 67 83 1.9E-10 T 11-11-2016 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 PRINTS PR01217 Proline rich extensin signature 104 129 1.9E-10 T 11-11-2016 ATY42_RS00040 6b9f7eb776341634cb1acebdc5d714ed 223 Gene3D G3DSA:3.30.1150.10 137 222 2.5E-15 T 11-11-2016 ATY42_RS00255 60eee54aeb22837bce756117d730dd49 404 Pfam PF01609 Transposase DDE domain 89 329 1.7E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00255 60eee54aeb22837bce756117d730dd49 404 SUPERFAMILY SSF53098 15 367 4.7E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06545 60eee54aeb22837bce756117d730dd49 404 Pfam PF01609 Transposase DDE domain 89 329 1.7E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS06545 60eee54aeb22837bce756117d730dd49 404 SUPERFAMILY SSF53098 15 367 4.7E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS23205 40fb6331c55de8700623db323591d739 133 Pfam PF05488 PAAR motif 5 74 2.4E-21 T 11-11-2016 IPR008727 PAAR motif ATY42_RS06680 edf3e5496626d6bc5322e0732b0fbf66 713 SUPERFAMILY SSF56935 46 713 2.44E-103 T 11-11-2016 ATY42_RS06680 edf3e5496626d6bc5322e0732b0fbf66 713 Gene3D G3DSA:2.40.170.20 178 713 3.6E-93 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06680 edf3e5496626d6bc5322e0732b0fbf66 713 Pfam PF00593 TonB dependent receptor 471 712 2.3E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06680 edf3e5496626d6bc5322e0732b0fbf66 713 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 69 713 2.0E-79 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 ATY42_RS06680 edf3e5496626d6bc5322e0732b0fbf66 713 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 176 2.4E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06680 edf3e5496626d6bc5322e0732b0fbf66 713 Gene3D G3DSA:2.170.130.10 69 177 4.7E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 Gene3D G3DSA:3.40.50.620 238 425 6.6E-88 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 Gene3D G3DSA:3.40.50.620 486 634 6.6E-88 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 SUPERFAMILY SSF52402 490 630 2.19E-86 T 11-11-2016 ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 SUPERFAMILY SSF52402 252 403 2.19E-86 T 11-11-2016 ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 570 9.3E-142 T 11-11-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 Pfam PF13537 Glutamine amidotransferase domain 52 171 6.5E-47 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 PIRSF PIRSF001589 1 646 2.5E-158 T 11-11-2016 ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 Gene3D G3DSA:3.60.20.10 1 220 7.8E-69 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 Pfam PF00733 Asparagine synthase 263 634 3.3E-107 T 11-11-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ATY42_RS07475 7bb43315b7b25d583e127ce3ceb96565 646 SUPERFAMILY SSF56235 1 219 6.26E-64 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 Pfam PF02033 Ribosome-binding factor A 8 110 3.8E-29 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 11-11-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 114 2.9E-30 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 117 20.961 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 SUPERFAMILY SSF89919 4 113 2.22E-30 T 11-11-2016 IPR023799 Ribosome-binding factor A domain ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 Gene3D G3DSA:3.30.300.20 5 114 1.2E-36 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS16165 373d805d52a4b755c9aec77ea084286a 130 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 10 97 3.0E-44 T 11-11-2016 IPR000238 Ribosome-binding factor A GO:0006364 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 Gene3D G3DSA:2.60.40.180 10 115 9.2E-28 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 SUPERFAMILY SSF49472 8 115 9.94E-32 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 Pfam PF00576 HIUase/Transthyretin family 13 115 2.8E-26 T 11-11-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 PRINTS PR00189 Transthyretin signature 97 115 3.6E-11 T 11-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 PRINTS PR00189 Transthyretin signature 12 32 3.6E-11 T 11-11-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 ProSitePatterns PS00769 Transthyretin signature 2. 102 114 - T 11-11-2016 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ATY42_RS21940 b68efe18183fe218925c51f6d4bf32e9 115 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 11 115 2.4E-26 T 11-11-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 ATY42_RS04400 28033929cd79f176f880839655497f09 287 SUPERFAMILY SSF117892 51 190 5.75E-20 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS04400 28033929cd79f176f880839655497f09 287 SMART SM00244 19 184 4.3E-17 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS04400 28033929cd79f176f880839655497f09 287 TIGRFAM TIGR01932 hflC: HflC protein 150 284 8.2E-40 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 ATY42_RS04400 28033929cd79f176f880839655497f09 287 Pfam PF01145 SPFH domain / Band 7 family 23 201 6.6E-25 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS04400 28033929cd79f176f880839655497f09 287 PIRSF PIRSF005651 1 287 5.6E-81 T 11-11-2016 IPR010200 HflC GO:0016021|GO:0052547 ATY42_RS15475 f6a71ba5a7a36550ae9b08c328193ab5 256 Gene3D G3DSA:3.90.470.20 69 141 2.1E-5 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS15475 f6a71ba5a7a36550ae9b08c328193ab5 256 PRINTS PR01399 Enterobactin synthetase component D signature 68 88 8.6E-9 T 11-11-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 ATY42_RS15475 f6a71ba5a7a36550ae9b08c328193ab5 256 PRINTS PR01399 Enterobactin synthetase component D signature 183 199 8.6E-9 T 11-11-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 ATY42_RS15475 f6a71ba5a7a36550ae9b08c328193ab5 256 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 136 209 1.3E-9 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS15475 f6a71ba5a7a36550ae9b08c328193ab5 256 SUPERFAMILY SSF56214 134 226 2.96E-12 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS15475 f6a71ba5a7a36550ae9b08c328193ab5 256 Gene3D G3DSA:3.90.470.20 142 207 1.0E-5 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Gene3D G3DSA:3.90.740.10 227 442 2.8E-53 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 879 0.0 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 SUPERFAMILY SSF52374 6 230 1.52E-145 T 11-11-2016 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 SUPERFAMILY SSF52374 434 684 1.52E-145 T 11-11-2016 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 SUPERFAMILY SSF50677 230 433 4.71E-49 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Gene3D G3DSA:3.40.50.620 443 591 2.0E-151 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Gene3D G3DSA:3.40.50.620 8 226 2.0E-151 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Gene3D G3DSA:3.40.50.620 637 666 2.0E-151 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 8 879 23.342 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 175 2.1E-27 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 637 674 3.9E-6 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 435 590 1.4E-8 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Pfam PF08264 Anticodon-binding domain of tRNA 718 840 5.0E-13 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 189 202 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 505 523 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 542 564 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 157 173 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 219 238 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 575 585 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 PRINTS PR00985 Leucyl-tRNA synthetase signature 131 148 1.8E-45 T 11-11-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 SUPERFAMILY SSF47323 683 879 1.27E-32 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 225 421 1.7E-69 T 11-11-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ATY42_RS16680 a071d86d69b1599026086a2e5cefc299 880 Gene3D G3DSA:1.10.730.10 667 815 8.6E-39 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS12235 7fcbb7d70e606ff1b5960fc15290de72 276 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 276 1.3E-115 T 11-11-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ATY42_RS12235 7fcbb7d70e606ff1b5960fc15290de72 276 Gene3D G3DSA:3.40.50.300 30 270 3.2E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12235 7fcbb7d70e606ff1b5960fc15290de72 276 Pfam PF00005 ABC transporter 45 201 1.5E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS12235 7fcbb7d70e606ff1b5960fc15290de72 276 SUPERFAMILY SSF52540 31 263 4.22E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12235 7fcbb7d70e606ff1b5960fc15290de72 276 ProSitePatterns PS00211 ABC transporters family signature. 173 187 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS12235 7fcbb7d70e606ff1b5960fc15290de72 276 SMART SM00382 54 257 5.9E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS22900 401921912db9dd957fad5be790aaf905 212 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 20 208 26.37 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATY42_RS22900 401921912db9dd957fad5be790aaf905 212 Gene3D G3DSA:3.40.50.150 22 211 3.2E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22900 401921912db9dd957fad5be790aaf905 212 PIRSF PIRSF003078 1 212 1.3E-76 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATY42_RS22900 401921912db9dd957fad5be790aaf905 212 SUPERFAMILY SSF53335 29 211 2.81E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22900 401921912db9dd957fad5be790aaf905 212 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 32 211 1.1E-53 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATY42_RS22900 401921912db9dd957fad5be790aaf905 212 Pfam PF02527 rRNA small subunit methyltransferase G 31 207 6.2E-53 T 11-11-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ATY42_RS08040 393675974449da2833a800fd1eb420c8 565 SUPERFAMILY SSF50156 446 537 6.12E-9 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08040 393675974449da2833a800fd1eb420c8 565 Pfam PF05299 M61 glycyl aminopeptidase 241 358 8.4E-34 T 11-11-2016 IPR007963 Peptidase M61, catalytic domain ATY42_RS08040 393675974449da2833a800fd1eb420c8 565 PIRSF PIRSF016493 1 565 7.9E-141 T 11-11-2016 IPR024191 Peptidase M61 ATY42_RS08040 393675974449da2833a800fd1eb420c8 565 Gene3D G3DSA:2.30.42.10 461 537 4.3E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08040 393675974449da2833a800fd1eb420c8 565 SMART SM00228 463 530 0.0085 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08040 393675974449da2833a800fd1eb420c8 565 Pfam PF07720 Tetratricopeptide repeat 177 211 2.3E-9 T 11-11-2016 IPR011716 Tetratricopeptide TPR-3 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 SUPERFAMILY SSF69864 191 412 7.46E-56 T 11-11-2016 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 Pfam PF00764 Arginosuccinate synthase 23 408 1.0E-82 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 Gene3D G3DSA:3.40.50.620 17 191 3.9E-39 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 Gene3D G3DSA:3.90.1260.10 192 412 2.7E-54 T 11-11-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 Hamap MF_00005 Argininosuccinate synthase [argG]. 19 413 39.567 T 11-11-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 TIGRFAM TIGR00032 argG: argininosuccinate synthase 22 411 5.3E-81 T 11-11-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 25 33 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 133 144 - T 11-11-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13235 6c7d72b74fef164c978e742ea2a5fa17 413 SUPERFAMILY SSF52402 20 201 1.92E-34 T 11-11-2016 ATY42_RS05755 c02fe45171dacc6e7f0e2d0bd2730349 391 Gene3D G3DSA:3.20.20.190 57 124 6.4E-5 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS05755 c02fe45171dacc6e7f0e2d0bd2730349 391 Gene3D G3DSA:3.20.20.190 161 269 6.4E-5 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS05755 c02fe45171dacc6e7f0e2d0bd2730349 391 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 49 377 3.0E-128 T 11-11-2016 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent ATY42_RS05755 c02fe45171dacc6e7f0e2d0bd2730349 391 SUPERFAMILY SSF51695 49 112 1.36E-26 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS05755 c02fe45171dacc6e7f0e2d0bd2730349 391 SUPERFAMILY SSF51695 145 339 1.36E-26 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SUPERFAMILY SSF48403 240 560 1.04E-46 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Pfam PF12796 Ankyrin repeats (3 copies) 410 470 1.2E-6 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Pfam PF12796 Ankyrin repeats (3 copies) 693 783 1.7E-7 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Pfam PF12796 Ankyrin repeats (3 copies) 826 912 5.6E-9 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Pfam PF12796 Ankyrin repeats (3 copies) 319 399 4.0E-11 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SUPERFAMILY SSF48403 693 1088 1.21E-57 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Pfam PF00023 Ankyrin repeat 918 948 0.0028 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Pfam PF00023 Ankyrin repeat 1036 1066 0.025 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 404 435 420.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 884 913 0.97 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 373 403 6.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 950 987 150.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 681 716 390.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 439 468 0.0012 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 304 336 15.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 720 749 2500.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 1035 1064 0.33 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 917 946 1.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 505 539 58.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 472 501 310.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 753 782 0.0051 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 235 264 700.0 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 340 369 0.0098 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 SMART SM00248 851 880 0.24 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Gene3D G3DSA:1.25.40.20 389 560 1.1E-34 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Gene3D G3DSA:1.25.40.20 826 1089 7.3E-49 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Gene3D G3DSA:1.25.40.20 620 806 1.2E-30 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS02170 3d46cbb2b6c37657eea28c6c4d701aa5 1106 Gene3D G3DSA:1.25.40.20 240 388 2.7E-28 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS17930 755337141cd60232d578249021bfea3a 208 Gene3D G3DSA:1.10.1050.10 1 102 1.5E-42 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 95 119 - T 11-11-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 3.6E-77 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 SUPERFAMILY SSF55174 2 208 1.96E-65 T 11-11-2016 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 Pfam PF01479 S4 domain 98 144 1.1E-17 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 Gene3D G3DSA:3.10.290.10 103 192 1.0E-28 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 SMART SM01390 3 96 7.6E-48 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 96 1.4E-30 T 11-11-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 SMART SM00363 97 161 1.2E-16 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS17930 755337141cd60232d578249021bfea3a 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 34.619 T 11-11-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 SUPERFAMILY SSF55874 192 354 7.41E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 SMART SM00388 131 201 5.9E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 SUPERFAMILY SSF47384 131 201 1.8E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 350 4.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 312 4.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 298 4.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 PRINTS PR00344 Bacterial sensor protein C-terminal signature 313 331 4.1E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 SMART SM00387 243 353 6.0E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 200 3.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 Gene3D G3DSA:3.30.565.10 202 351 2.9E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11820 b9a02e06748f097aac19d00271bd0c88 358 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 244 351 9.6E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12435 4cff6d75d3748792f4c8064d8b940feb 146 Pfam PF13358 DDE superfamily endonuclease 3 111 8.4E-22 T 11-11-2016 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 Pfam PF03150 Di-haem cytochrome c peroxidase 36 184 1.6E-36 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 SUPERFAMILY SSF46626 25 171 1.13E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 SUPERFAMILY SSF46626 161 229 9.23E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 SUPERFAMILY SSF46626 277 340 9.23E-29 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 Gene3D G3DSA:1.10.760.10 176 342 3.8E-37 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 Gene3D G3DSA:1.10.760.10 33 175 1.0E-36 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS00300 97bfd9d66ca33417d43366628d5b5354 348 PIRSF PIRSF000294 27 346 4.5E-62 T 11-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 ATY42_RS13675 43e350819e207c28cf37dbdd60079514 419 Pfam PF00033 Cytochrome b/b6/petB 32 220 3.9E-68 T 11-11-2016 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ATY42_RS13675 43e350819e207c28cf37dbdd60079514 419 SUPERFAMILY SSF81342 24 292 2.51E-95 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATY42_RS13675 43e350819e207c28cf37dbdd60079514 419 SUPERFAMILY SSF81648 294 410 1.74E-31 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ATY42_RS13675 43e350819e207c28cf37dbdd60079514 419 PIRSF PIRSF038885 5 419 1.2E-155 T 11-11-2016 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 ATY42_RS13675 43e350819e207c28cf37dbdd60079514 419 Gene3D G3DSA:1.20.810.10 14 414 1.6E-157 T 11-11-2016 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 ATY42_RS13675 43e350819e207c28cf37dbdd60079514 419 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 290 393 1.9E-38 T 11-11-2016 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ATY42_RS13420 b4cbe62a8825ee04903d72b834d4d90c 146 SUPERFAMILY SSF53933 54 137 2.24E-31 T 11-11-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 ATY42_RS13420 b4cbe62a8825ee04903d72b834d4d90c 146 Gene3D G3DSA:3.10.450.30 55 137 5.0E-36 T 11-11-2016 IPR016191 Ribonuclease/ribotoxin GO:0003723|GO:0004540 ATY42_RS13420 b4cbe62a8825ee04903d72b834d4d90c 146 Pfam PF00545 ribonuclease 55 135 1.6E-26 T 11-11-2016 IPR000026 Guanine-specific ribonuclease N1/T1/U2 GO:0003723|GO:0004521 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 72 111 1.2E-6 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 3.9E-22 T 11-11-2016 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 3.9E-22 T 11-11-2016 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.9E-22 T 11-11-2016 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 3.9E-22 T 11-11-2016 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 3.9E-22 T 11-11-2016 ATY42_RS10710 f384e51c3712bd167bbfdc28ff7dacf4 523 Pfam PF00361 Proton-conducting membrane transporter 128 346 1.2E-39 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82714 707 793 1.27E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 Gene3D G3DSA:3.30.70.1430 41 133 2.9E-15 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82693 42 131 9.42E-14 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82693 136 180 3.27E-17 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82693 272 324 3.27E-17 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 Gene3D G3DSA:1.10.3850.10 279 494 3.2E-50 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 Gene3D G3DSA:1.10.3850.10 799 1010 1.6E-53 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 Pfam PF00873 AcrB/AcrD/AcrF family 6 1008 1.2E-154 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82714 183 266 5.23E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 538 555 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 4.5E-25 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 Gene3D G3DSA:3.30.2090.10 707 790 1.1E-10 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 Gene3D G3DSA:3.30.2090.10 183 267 4.4E-8 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82866 294 493 7.46E-40 T 11-11-2016 ATY42_RS07685 b7289d55b302c62cd5188f3fb42b698a 1018 SUPERFAMILY SSF82866 795 1013 2.22E-46 T 11-11-2016 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 SUPERFAMILY SSF47384 14 80 2.35E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 SUPERFAMILY SSF55874 69 238 3.8E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 Gene3D G3DSA:3.30.565.10 66 238 2.2E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 166 180 1.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 184 194 1.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 200 218 1.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 PRINTS PR00344 Bacterial sensor protein C-terminal signature 224 237 1.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 Gene3D G3DSA:1.10.287.130 18 65 1.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 SMART SM00388 15 80 1.1E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 SMART SM00387 129 238 8.2E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 132 231 6.2E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07300 700cf3864f880c0b5892d07708e45981 239 Pfam PF00512 His Kinase A (phospho-acceptor) domain 19 78 2.6E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 SUPERFAMILY SSF50182 669 733 4.25E-15 T 11-11-2016 IPR010920 LSM domain ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 SUPERFAMILY SSF82689 735 828 1.44E-14 T 11-11-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 Gene3D G3DSA:3.30.70.100 737 820 4.9E-13 T 11-11-2016 ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 Gene3D G3DSA:2.30.30.60 683 731 3.5E-15 T 11-11-2016 ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 Pfam PF12607 Protein of unknown function (DUF3772) 165 226 3.8E-12 T 11-11-2016 IPR022249 Domain of unknown function DUF3772 ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 Pfam PF00924 Mechanosensitive ion channel 626 813 5.9E-43 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ATY42_RS00385 fde5cb5a5e069c89e0cef6c6456b0bcf 852 SUPERFAMILY SSF82861 584 666 2.62E-11 T 11-11-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ATY42_RS04195 0e0ed649639bc8b6550ca1d84970447f 288 Pfam PF05107 CRISPR-associated protein Cas7 6 275 4.7E-111 T 11-11-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C ATY42_RS04195 0e0ed649639bc8b6550ca1d84970447f 288 TIGRFAM TIGR02589 cas_Csd2: CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG 7 287 7.2E-122 T 11-11-2016 IPR013418 CRISPR-associated protein Csd2 ATY42_RS04195 0e0ed649639bc8b6550ca1d84970447f 288 TIGRFAM TIGR01595 cas_CT1132: CRISPR-associated protein, CT1132 family 4 275 2.5E-84 T 11-11-2016 IPR006482 CRISPR-associated protein Cas7, subtype I-B/I-C ATY42_RS18170 7295d2176a612761e9d80daceb6bc2e4 217 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 47 214 6.4E-25 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ATY42_RS18170 7295d2176a612761e9d80daceb6bc2e4 217 SUPERFAMILY SSF89392 44 215 5.89E-38 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX ATY42_RS18170 7295d2176a612761e9d80daceb6bc2e4 217 Gene3D G3DSA:2.50.20.10 14 215 5.6E-48 T 11-11-2016 ATY42_RS18170 7295d2176a612761e9d80daceb6bc2e4 217 Pfam PF03550 Outer membrane lipoprotein LolB 58 213 5.6E-39 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ATY42_RS18170 7295d2176a612761e9d80daceb6bc2e4 217 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 4 215 24.203 T 11-11-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 ATY42_RS18035 ba6e358bf3f043afa6ade55e87981f72 99 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 21.941 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18035 ba6e358bf3f043afa6ade55e87981f72 99 SUPERFAMILY SSF54189 6 97 4.68E-28 T 11-11-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18035 ba6e358bf3f043afa6ade55e87981f72 99 Gene3D G3DSA:3.30.70.330 6 97 9.9E-31 T 11-11-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 ATY42_RS18035 ba6e358bf3f043afa6ade55e87981f72 99 Pfam PF00276 Ribosomal protein L23 10 95 1.6E-28 T 11-11-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ATY42_RS19390 13bf8b632972f7bcd4b4b7eb85a350de 156 Gene3D G3DSA:1.10.940.10 21 151 8.8E-43 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATY42_RS19390 13bf8b632972f7bcd4b4b7eb85a350de 156 Pfam PF01029 NusB family 23 146 2.4E-33 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATY42_RS19390 13bf8b632972f7bcd4b4b7eb85a350de 156 SUPERFAMILY SSF48013 19 150 1.44E-40 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATY42_RS19390 13bf8b632972f7bcd4b4b7eb85a350de 156 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 21 147 2.8E-42 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 ATY42_RS19390 13bf8b632972f7bcd4b4b7eb85a350de 156 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 19 150 23.149 T 11-11-2016 IPR011605 NusB antitermination factor GO:0006353 ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 Gene3D G3DSA:1.10.275.10 5 197 1.3E-69 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 503 5.1E-204 T 11-11-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 SUPERFAMILY SSF48557 5 502 9.42E-187 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 4 504 44.948 T 11-11-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 Gene3D G3DSA:1.20.200.10 198 503 8.4E-124 T 11-11-2016 ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 11-11-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 ATY42_RS11905 6527d6eb0aab1ed398ed04c4a3fe627e 513 Pfam PF00221 Aromatic amino acid lyase 13 470 5.9E-182 T 11-11-2016 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 37 475 2.6E-147 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 SUPERFAMILY SSF102114 162 410 5.62E-59 T 11-11-2016 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 Pfam PF01938 TRAM domain 416 477 1.0E-19 T 11-11-2016 IPR002792 TRAM domain ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 Gene3D G3DSA:3.80.30.20 179 417 2.2E-75 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 Pfam PF04055 Radical SAM superfamily 184 363 6.9E-28 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 Pfam PF00919 Uncharacterized protein family UPF0004 37 137 9.4E-30 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 SMART SM00729 180 405 1.4E-57 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 37 477 1.7E-179 T 11-11-2016 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 184 204 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 ATY42_RS13710 a01523ba4ae2c4ea1c3ca2bfa1081d28 484 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 36 478 72.865 T 11-11-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Gene3D G3DSA:3.40.50.300 173 352 4.8E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 SMART SM01086 656 745 1.3E-32 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 11-11-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Gene3D G3DSA:3.40.50.300 446 667 1.2E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 2.2E-12 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 SUPERFAMILY SSF81923 1 141 1.07E-56 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 3.1E-22 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 11-11-2016 IPR028299 ClpA/B, conserved site 2 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Gene3D G3DSA:1.10.1780.10 1 141 2.3E-40 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 SMART SM00382 490 626 2.7E-9 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 SMART SM00382 209 354 8.2E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 SUPERFAMILY SSF52540 440 745 2.68E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.5E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.5E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.5E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.5E-37 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 SUPERFAMILY SSF52540 171 433 6.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 315 9.0E-11 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 8.0E-46 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Gene3D G3DSA:1.10.8.60 668 750 6.2E-29 T 11-11-2016 ATY42_RS12660 8706d2b2b31f5b929b5f24fac5018a61 760 Gene3D G3DSA:1.10.8.60 356 439 2.5E-29 T 11-11-2016 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SUPERFAMILY SSF52540 24 346 9.92E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Pfam PF02559 CarD-like/TRCF domain 485 579 7.1E-24 T 11-11-2016 IPR003711 CarD-like/TRCF domain ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Gene3D G3DSA:3.40.50.300 592 791 1.0E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 27 1113 28.794 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SMART SM00982 1014 1114 3.6E-51 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Pfam PF03461 TRCF domain 1015 1107 1.3E-27 T 11-11-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SUPERFAMILY SSF143517 1006 1152 9.68E-43 T 11-11-2016 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Pfam PF00270 DEAD/DEAH box helicase 610 769 7.6E-17 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Gene3D G3DSA:3.40.50.300 804 961 2.2E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SUPERFAMILY SSF52540 787 994 3.67E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SUPERFAMILY SSF52540 528 789 1.83E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SMART SM01058 484 581 2.0E-47 T 11-11-2016 IPR003711 CarD-like/TRCF domain ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SUPERFAMILY SSF52540 360 470 2.65E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 153 1087 0.0 T 11-11-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SMART SM00487 605 795 9.9E-35 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Gene3D G3DSA:3.30.2060.10 136 214 4.1E-11 T 11-11-2016 ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SMART SM00490 831 915 7.4E-19 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 SUPERFAMILY SSF141259 476 553 2.88E-21 T 11-11-2016 IPR003711 CarD-like/TRCF domain ATY42_RS07280 2aaccd3aa8133106cc52d6650a2f23d4 1154 Pfam PF00271 Helicase conserved C-terminal domain 815 914 5.0E-17 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS10770 fe921adb628380c3fb89f7671b3ea327 155 SUPERFAMILY SSF46785 47 121 4.23E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10770 fe921adb628380c3fb89f7671b3ea327 155 Gene3D G3DSA:1.10.10.10 34 100 1.2E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10770 fe921adb628380c3fb89f7671b3ea327 155 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 93 149 3.9E-13 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 ATY42_RS10770 fe921adb628380c3fb89f7671b3ea327 155 Gene3D G3DSA:1.10.60.10 105 148 6.3E-19 T 11-11-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 ATY42_RS10770 fe921adb628380c3fb89f7671b3ea327 155 SMART SM00529 54 152 1.9E-32 T 11-11-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 ATY42_RS10770 fe921adb628380c3fb89f7671b3ea327 155 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 36 90 2.9E-12 T 11-11-2016 IPR022687 DTXR-type HTH domain GO:0003677 ATY42_RS05365 263b3b138c6887088a77bdd0a7f398f7 122 Pfam PF11512 Agrobacterium tumefaciens protein Atu4866 44 118 4.8E-30 T 11-11-2016 IPR020955 Uncharacterised protein family Atu4866 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 SUPERFAMILY SSF52335 8 197 3.4E-64 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 8 527 44.334 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 PIRSF PIRSF000414 2 527 7.5E-211 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 SMART SM00851 20 133 5.7E-51 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 Gene3D G3DSA:3.40.140.20 374 517 4.1E-56 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 9 527 1.1E-216 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 457 2.7E-111 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 SMART SM00798 138 459 5.2E-189 T 11-11-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 Pfam PF02142 MGS-like domain 20 132 1.4E-24 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 Gene3D G3DSA:3.40.50.1380 7 191 1.6E-76 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 SUPERFAMILY SSF53927 220 527 7.02E-125 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS02580 3734082e396d72be5314d5353e05463d 527 Gene3D G3DSA:3.40.140.20 252 368 2.3E-45 T 11-11-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS09205 f63ba24ea603a027de4faaae586993e9 157 Gene3D G3DSA:3.10.50.40 126 141 5.1E-17 T 11-11-2016 ATY42_RS09205 f63ba24ea603a027de4faaae586993e9 157 Gene3D G3DSA:3.10.50.40 3 80 5.1E-17 T 11-11-2016 ATY42_RS09205 f63ba24ea603a027de4faaae586993e9 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 136 2.6E-10 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ATY42_RS09205 f63ba24ea603a027de4faaae586993e9 157 SUPERFAMILY SSF54534 3 140 5.3E-35 T 11-11-2016 ATY42_RS10760 acd49c5b750eff2edff2c76a4c6ba365 384 Pfam PF00672 HAMP domain 307 373 2.5E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS10760 acd49c5b750eff2edff2c76a4c6ba365 384 SUPERFAMILY SSF158472 327 374 1.44E-7 T 11-11-2016 ATY42_RS10760 acd49c5b750eff2edff2c76a4c6ba365 384 Pfam PF17201 Cache 3/Cache 2 fusion domain 86 243 7.1E-27 T 11-11-2016 IPR033462 Cache 3/Cache 2 fusion domain ATY42_RS10760 acd49c5b750eff2edff2c76a4c6ba365 384 SMART SM00304 326 379 2.5E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS10760 acd49c5b750eff2edff2c76a4c6ba365 384 SUPERFAMILY SSF103190 141 217 7.85E-6 T 11-11-2016 IPR029151 Periplasmic sensor domain-like ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 SUPERFAMILY SSF51556 55 377 8.17E-91 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 Gene3D G3DSA:2.30.40.10 3 69 1.5E-25 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 SUPERFAMILY SSF51338 1 54 1.32E-31 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 SUPERFAMILY SSF51338 377 440 1.32E-31 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 ProSitePatterns PS00483 Dihydroorotase signature 2. 313 324 - T 11-11-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686 ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 Gene3D G3DSA:3.20.20.140 70 416 5.5E-105 T 11-11-2016 ATY42_RS13285 d3ee586fd55a71377cdf64e5a2fc66bb 449 Pfam PF01979 Amidohydrolase family 51 430 1.6E-19 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 Gene3D G3DSA:3.30.499.10 23 236 5.7E-60 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 SUPERFAMILY SSF53732 22 588 7.46E-182 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 Pfam PF00694 Aconitase C-terminal domain 657 787 4.3E-29 T 11-11-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 Gene3D G3DSA:3.20.19.10 606 857 3.1E-64 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 360 374 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 402 413 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 191 204 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 464 477 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 205 220 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 138 151 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 267 280 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 162 170 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 PRINTS PR00415 Aconitase family signature 281 294 4.3E-28 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 SUPERFAMILY SSF52016 599 857 2.94E-67 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 Gene3D G3DSA:3.40.1060.10 238 355 1.5E-33 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 859 0.0 T 11-11-2016 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 Gene3D G3DSA:3.30.499.10 357 545 7.8E-55 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS04310 fceeda16f5a599eb075ef861f50cbb83 863 Pfam PF00330 Aconitase family (aconitate hydratase) 70 533 3.8E-146 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS09210 8519fb27056b5c95f6ba5164c7e242c0 383 Pfam PF01610 Transposase 127 362 2.1E-62 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS09210 8519fb27056b5c95f6ba5164c7e242c0 383 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 64 112 9.1E-9 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS12370 fd6258d42c75e50b7bddb6eecc04516f 155 Gene3D G3DSA:2.170.130.10 70 114 6.6E-7 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS12370 fd6258d42c75e50b7bddb6eecc04516f 155 SUPERFAMILY SSF56935 38 115 1.14E-9 T 11-11-2016 ATY42_RS12370 fd6258d42c75e50b7bddb6eecc04516f 155 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 117 6.8E-8 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS00460 23d6f74a9e160ed71926b9cb6ac6cc6b 151 TIGRFAM TIGR02561 HrpB1_HrpK: type III secretion protein HrpB1/HrpK 2 145 6.7E-59 T 11-11-2016 IPR013394 Type III secretion system, HrpB1/HrpK ATY42_RS00460 23d6f74a9e160ed71926b9cb6ac6cc6b 151 Pfam PF09613 Bacterial type III secretion protein (HrpB1_HrpK) 2 124 2.3E-44 T 11-11-2016 IPR013394 Type III secretion system, HrpB1/HrpK ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 Pfam PF13186 Iron-sulfur cluster-binding domain 238 304 3.3E-11 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 TIGRFAM TIGR02109 PQQ_syn_pqqE: coenzyme PQQ biosynthesis enzyme PqqE 4 358 3.0E-159 T 11-11-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 Pfam PF04055 Radical SAM superfamily 13 158 2.1E-17 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 241 325 1.8E-9 T 11-11-2016 IPR023885 4Fe4S-binding SPASM domain ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 Pfam PF13353 4Fe-4S single cluster domain 14 91 5.2E-5 T 11-11-2016 ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 Gene3D G3DSA:3.20.20.70 5 322 1.4E-65 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 Hamap MF_00660 Coenzyme PQQ synthesis protein E [pqqE]. 1 370 172.627 T 11-11-2016 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria GO:0018189|GO:0051539 ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 SUPERFAMILY SSF102114 6 313 1.57E-67 T 11-11-2016 ATY42_RS08390 41279ab74f694b6559f0f13a81420b21 372 PIRSF PIRSF037420 1 352 5.5E-121 T 11-11-2016 IPR017200 Coenzyme PQQ synthesis protein E ATY42_RS22190 74c22e8c4a948495f4d0af0abce6840a 305 PIRSF PIRSF004976 12 282 1.2E-68 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 ATY42_RS22190 74c22e8c4a948495f4d0af0abce6840a 305 SUPERFAMILY SSF52402 40 268 1.83E-52 T 11-11-2016 ATY42_RS22190 74c22e8c4a948495f4d0af0abce6840a 305 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 22 283 53.732 T 11-11-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 Reactome: R-HSA-6782315 ATY42_RS22190 74c22e8c4a948495f4d0af0abce6840a 305 Gene3D G3DSA:3.40.50.620 35 219 2.9E-21 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS22190 74c22e8c4a948495f4d0af0abce6840a 305 Pfam PF01171 PP-loop family 53 217 2.6E-16 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ATY42_RS21520 d1c4ccfd3fd9b6d88f1195e80ed4e01f 311 Gene3D G3DSA:2.170.130.10 10 155 4.0E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS21520 d1c4ccfd3fd9b6d88f1195e80ed4e01f 311 Pfam PF07715 TonB-dependent Receptor Plug Domain 34 149 1.5E-18 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS21520 d1c4ccfd3fd9b6d88f1195e80ed4e01f 311 SUPERFAMILY SSF56935 238 269 4.44E-32 T 11-11-2016 ATY42_RS21520 d1c4ccfd3fd9b6d88f1195e80ed4e01f 311 SUPERFAMILY SSF56935 9 209 4.44E-32 T 11-11-2016 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 SMART SM00155 219 246 0.054 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 SMART SM00155 400 427 0.015 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 SUPERFAMILY SSF56024 74 317 5.49E-47 T 11-11-2016 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 Pfam PF13091 PLD-like domain 328 448 5.0E-24 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 Pfam PF13091 PLD-like domain 134 247 1.6E-16 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 SUPERFAMILY SSF56024 270 461 8.52E-43 T 11-11-2016 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 Gene3D G3DSA:3.30.870.10 320 461 5.9E-36 T 11-11-2016 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 Gene3D G3DSA:3.30.870.10 112 319 1.2E-47 T 11-11-2016 ATY42_RS00070 9c46a555d42e18fb503f0b9fa1a9d34d 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 20 486 3.3E-115 T 11-11-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ATY42_RS15730 cda1841f0a66fead698652b902772136 399 SUPERFAMILY SSF55920 165 391 8.24E-67 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS15730 cda1841f0a66fead698652b902772136 399 SUPERFAMILY SSF53092 16 165 9.77E-25 T 11-11-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal ATY42_RS15730 cda1841f0a66fead698652b902772136 399 Gene3D G3DSA:3.40.350.10 17 162 6.8E-22 T 11-11-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ATY42_RS15730 cda1841f0a66fead698652b902772136 399 Gene3D G3DSA:3.90.230.10 165 389 1.9E-63 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS15730 cda1841f0a66fead698652b902772136 399 Pfam PF01321 Creatinase/Prolidase N-terminal domain 35 166 1.1E-15 T 11-11-2016 IPR000587 Creatinase, N-terminal GO:0016787 ATY42_RS15730 cda1841f0a66fead698652b902772136 399 Pfam PF00557 Metallopeptidase family M24 174 381 1.3E-49 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 PIRSF PIRSF017184 5 492 1.7E-128 T 11-11-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 224 494 21.907 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 223 488 3.4E-72 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 Gene3D G3DSA:3.40.50.10260 6 231 1.2E-60 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 12 209 2.9E-41 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 314 324 - T 11-11-2016 IPR017953 Carbohydrate kinase, predicted, conserved site ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 Pfam PF01256 Carbohydrate kinase 247 485 4.4E-59 T 11-11-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 SUPERFAMILY SSF64153 7 245 8.11E-58 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 Pfam PF03853 YjeF-related protein N-terminus 30 187 5.7E-40 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 Gene3D G3DSA:3.40.1190.20 232 488 9.0E-83 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 209 23.396 T 11-11-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 ATY42_RS13540 cc5e60585539c4ad3b970f3c0ad5e3c5 495 SUPERFAMILY SSF53613 225 488 7.7E-71 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 451 475 1.5E-5 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 587 609 1.5E-5 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 529 1.5E-5 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 479 498 1.5E-5 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 Pfam PF00326 Prolyl oligopeptidase family 447 655 5.7E-44 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 SUPERFAMILY SSF53474 393 654 1.52E-68 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 Gene3D G3DSA:3.40.50.1820 326 654 4.1E-85 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 SUPERFAMILY SSF82171 58 285 2.94E-16 T 11-11-2016 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 SUPERFAMILY SSF82171 333 381 2.94E-16 T 11-11-2016 ATY42_RS21985 8c39cc496f16a87518b0cea342406640 694 Gene3D G3DSA:2.130.10.10 41 287 5.2E-19 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS16675 904037ed48ec07fdc2e799549a2d85b3 211 Pfam PF04390 Lipopolysaccharide-assembly 12 162 1.5E-13 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ATY42_RS16675 904037ed48ec07fdc2e799549a2d85b3 211 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 6 167 23.888 T 11-11-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 ATY42_RS16675 904037ed48ec07fdc2e799549a2d85b3 211 Gene3D G3DSA:3.30.160.150 21 174 5.3E-41 T 11-11-2016 ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 Pfam PF00255 Glutathione peroxidase 38 134 2.9E-31 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 PIRSF PIRSF000303 2 184 5.9E-55 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 SUPERFAMILY SSF52833 26 180 1.3E-47 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 ProSitePatterns PS00460 Glutathione peroxidases active site. 48 63 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 Gene3D G3DSA:3.40.30.10 35 181 4.1E-51 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 PRINTS PR01011 Glutathione peroxidase family signature 81 97 1.9E-14 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 PRINTS PR01011 Glutathione peroxidase family signature 142 151 1.9E-14 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS10030 a52d883290502d5f72cf00251d9b5e29 185 PRINTS PR01011 Glutathione peroxidase family signature 46 63 1.9E-14 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS11515 8de6ced23e9268c3a3ed9a79336e23e2 126 SUPERFAMILY SSF52172 5 120 3.27E-17 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS11515 8de6ced23e9268c3a3ed9a79336e23e2 126 Gene3D G3DSA:3.40.50.2300 5 121 2.1E-13 T 11-11-2016 ATY42_RS11515 8de6ced23e9268c3a3ed9a79336e23e2 126 Pfam PF00072 Response regulator receiver domain 9 84 7.6E-5 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS11515 8de6ced23e9268c3a3ed9a79336e23e2 126 SMART SM00448 7 115 4.6E-4 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 SUPERFAMILY SSF82866 950 1031 3.4E-12 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 SUPERFAMILY SSF82693 66 157 5.07E-19 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 SUPERFAMILY SSF82866 366 568 1.31E-41 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:1.10.3850.10 349 568 6.4E-54 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:1.10.3850.10 932 1030 5.1E-15 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:3.30.70.1430 66 163 5.0E-25 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 SUPERFAMILY SSF82714 841 924 7.06E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 PRINTS PR00702 Acriflavin resistance protein family signature 539 562 5.4E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 PRINTS PR00702 Acriflavin resistance protein family signature 514 537 5.4E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 PRINTS PR00702 Acriflavin resistance protein family signature 35 59 5.4E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 PRINTS PR00702 Acriflavin resistance protein family signature 63 81 5.4E-20 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:3.30.70.1430 697 758 1.4E-4 T 11-11-2016 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:3.30.2090.10 327 342 1.4E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:3.30.2090.10 215 281 1.4E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Gene3D G3DSA:3.30.2090.10 841 923 1.1E-13 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Pfam PF00873 AcrB/AcrD/AcrF family 644 1029 7.2E-60 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Pfam PF00873 AcrB/AcrD/AcrF family 300 568 1.9E-74 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 Pfam PF00873 AcrB/AcrD/AcrF family 29 282 9.2E-56 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13065 b8bbf75fccfbf883b406fc31c1e11440 1168 SUPERFAMILY SSF82714 215 281 3.27E-11 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS20815 0bb9ca88ee03392387905841ab6bde26 526 Gene3D G3DSA:3.40.30.10 12 69 5.9E-5 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS20815 0bb9ca88ee03392387905841ab6bde26 526 SUPERFAMILY SSF52833 30 160 7.36E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS20815 0bb9ca88ee03392387905841ab6bde26 526 Pfam PF13899 Thioredoxin-like 54 132 1.5E-14 T 11-11-2016 ATY42_RS20815 0bb9ca88ee03392387905841ab6bde26 526 Gene3D G3DSA:3.40.30.10 70 160 2.2E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 116 137 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 263 283 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 27 43 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 89 113 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 234 251 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 291 312 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 146 168 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 PRINTS PR01035 Tetracycline resistance protein signature 174 194 5.9E-43 T 11-11-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 Pfam PF07690 Major Facilitator Superfamily 21 354 5.2E-45 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 SUPERFAMILY SSF103473 13 355 1.29E-60 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 Gene3D G3DSA:1.20.1250.20 223 357 2.2E-14 T 11-11-2016 ATY42_RS01285 00e56cbd10012d7098f58e22907d1aec 434 Gene3D G3DSA:1.20.1250.20 14 203 8.2E-37 T 11-11-2016 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 670 43.057 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 SMART SM00490 460 546 2.5E-20 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 2.1E-21 T 11-11-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Pfam PF04851 Type III restriction enzyme, res subunit 16 105 2.4E-9 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Pfam PF02151 UvrB/uvrC motif 637 669 3.0E-10 T 11-11-2016 IPR001943 UVR domain GO:0005515 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Gene3D G3DSA:3.30.2060.10 161 235 2.6E-8 T 11-11-2016 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Pfam PF00271 Helicase conserved C-terminal domain 435 545 3.9E-19 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Gene3D G3DSA:3.40.50.300 388 408 5.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Gene3D G3DSA:3.40.50.300 278 338 5.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Gene3D G3DSA:3.40.50.300 5 89 5.3E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 SUPERFAMILY SSF52540 459 582 1.66E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 SUPERFAMILY SSF52540 37 82 1.66E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 SUPERFAMILY SSF46600 623 669 9.94E-12 T 11-11-2016 IPR001943 UVR domain GO:0005515 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 SMART SM00487 9 426 1.1E-26 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 SUPERFAMILY SSF52540 3 415 4.87E-133 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Gene3D G3DSA:4.10.860.10 617 669 5.1E-17 T 11-11-2016 IPR001943 UVR domain GO:0005515 ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 Gene3D G3DSA:3.40.50.300 419 582 2.0E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16045 2f764ad92678f573f6839b55dca386fd 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 668 0.0 T 11-11-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 SUPERFAMILY SSF52172 5 123 3.84E-35 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 Pfam PF00072 Response regulator receiver domain 8 117 1.0E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 Gene3D G3DSA:3.40.50.2300 3 121 2.6E-36 T 11-11-2016 ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 Gene3D G3DSA:2.40.50.40 140 202 8.0E-12 T 11-11-2016 ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 Pfam PF04397 LytTr DNA-binding domain 148 242 1.3E-23 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 SMART SM00850 146 243 2.8E-25 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ATY42_RS20130 433240c11d8f010b6403fa90017b042e 245 SMART SM00448 6 117 2.7E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS00330 ca1c1dfe249851755ab512275b8cc03d 649 Gene3D G3DSA:3.20.20.80 309 625 1.5E-99 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00330 ca1c1dfe249851755ab512275b8cc03d 649 Gene3D G3DSA:3.20.20.80 150 302 4.3E-25 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00330 ca1c1dfe249851755ab512275b8cc03d 649 Pfam PF02446 4-alpha-glucanotransferase 310 620 1.6E-70 T 11-11-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 ATY42_RS00330 ca1c1dfe249851755ab512275b8cc03d 649 Pfam PF02446 4-alpha-glucanotransferase 158 303 5.4E-13 T 11-11-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 ATY42_RS00330 ca1c1dfe249851755ab512275b8cc03d 649 SUPERFAMILY SSF51445 152 624 4.28E-116 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00330 ca1c1dfe249851755ab512275b8cc03d 649 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 309 635 4.0E-62 T 11-11-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 Gene3D G3DSA:3.20.20.70 2 221 1.0E-97 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 SUPERFAMILY SSF51366 4 217 1.06E-73 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 PIRSF PIRSF001461 1 223 6.7E-103 T 11-11-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 9.2E-90 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATY42_RS20390 cd7e56c16fbb2f9d43b4ea57cc7e0682 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 216 1.1E-95 T 11-11-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ATY42_RS06620 5b8e70a0a715ef32d41cf52d12a759ea 203 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 33 202 2.7E-53 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ATY42_RS06620 5b8e70a0a715ef32d41cf52d12a759ea 203 PIRSF PIRSF015617 6 203 7.7E-64 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ATY42_RS06620 5b8e70a0a715ef32d41cf52d12a759ea 203 SUPERFAMILY SSF52540 12 202 1.24E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06620 5b8e70a0a715ef32d41cf52d12a759ea 203 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 1 26 1.3E-6 T 11-11-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ATY42_RS06620 5b8e70a0a715ef32d41cf52d12a759ea 203 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 32 202 1.3E-62 T 11-11-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 ATY42_RS06620 5b8e70a0a715ef32d41cf52d12a759ea 203 Gene3D G3DSA:3.40.50.300 8 202 1.8E-66 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14730 e26b0a2331edac3c9b1db4ea2e80edf6 327 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 10 301 6.2E-89 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ATY42_RS14730 e26b0a2331edac3c9b1db4ea2e80edf6 327 Gene3D G3DSA:3.40.50.300 8 175 1.8E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14730 e26b0a2331edac3c9b1db4ea2e80edf6 327 Gene3D G3DSA:1.10.287.890 205 291 1.8E-28 T 11-11-2016 ATY42_RS14730 e26b0a2331edac3c9b1db4ea2e80edf6 327 Pfam PF01715 IPP transferase 43 292 2.3E-80 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ATY42_RS14730 e26b0a2331edac3c9b1db4ea2e80edf6 327 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 312 29.288 T 11-11-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ATY42_RS14730 e26b0a2331edac3c9b1db4ea2e80edf6 327 SUPERFAMILY SSF52540 11 154 2.1E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 SUPERFAMILY SSF101801 249 321 5.23E-15 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 PIRSF PIRSF002888 3 327 2.7E-91 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 SUPERFAMILY SSF103039 5 15 3.14E-19 T 11-11-2016 IPR028976 CheC-like domain ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 SUPERFAMILY SSF103039 55 231 3.14E-19 T 11-11-2016 IPR028976 CheC-like domain ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 Gene3D G3DSA:2.30.330.10 243 319 3.1E-10 T 11-11-2016 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 Pfam PF02154 Flagellar motor switch protein FliM 38 230 2.5E-72 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 251 318 4.8E-19 T 11-11-2016 IPR001543 Surface presentation of antigen (SpoA) ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 5 318 1.7E-103 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.1E-24 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 4 17 1.1E-24 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 1.1E-24 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS12930 30215b3f866f321ea7f336e3eac93157 337 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 1.1E-24 T 11-11-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ATY42_RS20380 d7298507750b7934b6658a204872d6db 309 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 5 307 1.1E-140 T 11-11-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 ATY42_RS20380 d7298507750b7934b6658a204872d6db 309 SMART SM00046 5 130 2.9E-17 T 11-11-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ATY42_RS20380 d7298507750b7934b6658a204872d6db 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 6 301 4.7E-62 T 11-11-2016 IPR005218 Diacylglycerol/lipid kinase ATY42_RS20380 d7298507750b7934b6658a204872d6db 309 SUPERFAMILY SSF111331 3 305 7.85E-67 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain ATY42_RS20380 d7298507750b7934b6658a204872d6db 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 129 9.4E-27 T 11-11-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ATY42_RS20380 d7298507750b7934b6658a204872d6db 309 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 3 308 49.477 T 11-11-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 ATY42_RS03730 0e9473038f79d7d3d279181ecca354d2 377 SUPERFAMILY SSF52540 7 337 4.99E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03730 0e9473038f79d7d3d279181ecca354d2 377 Pfam PF00437 Type II/IV secretion system protein 11 256 6.9E-37 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS03730 0e9473038f79d7d3d279181ecca354d2 377 Gene3D G3DSA:3.40.50.300 102 340 3.0E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03730 0e9473038f79d7d3d279181ecca354d2 377 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 6 341 2.9E-132 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Gene3D G3DSA:2.170.130.10 146 250 1.1E-5 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Gene3D G3DSA:2.40.170.20 251 332 2.1E-39 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Gene3D G3DSA:2.40.170.20 962 1019 2.1E-39 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Gene3D G3DSA:2.40.170.20 364 906 2.1E-39 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Pfam PF07715 TonB-dependent Receptor Plug Domain 145 244 2.7E-4 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Pfam PF13620 Carboxypeptidase regulatory-like domain 34 114 2.3E-16 T 11-11-2016 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 SUPERFAMILY SSF49464 33 119 3.3E-12 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 SUPERFAMILY SSF56935 365 650 3.57E-51 T 11-11-2016 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 SUPERFAMILY SSF56935 699 744 3.57E-51 T 11-11-2016 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 SUPERFAMILY SSF56935 113 320 3.57E-51 T 11-11-2016 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 SUPERFAMILY SSF56935 964 1021 3.57E-51 T 11-11-2016 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 SUPERFAMILY SSF56935 793 908 3.57E-51 T 11-11-2016 ATY42_RS16095 020f0b1e40baa453b3cf2d33c3c93d76 1064 Gene3D G3DSA:2.60.40.1120 33 124 6.4E-12 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain ATY42_RS04450 da89f0d11bb1c4af2ae09c9e40d9cbb0 370 Gene3D G3DSA:3.40.50.2000 155 341 5.9E-13 T 11-11-2016 ATY42_RS04450 da89f0d11bb1c4af2ae09c9e40d9cbb0 370 SUPERFAMILY SSF53756 5 368 6.28E-52 T 11-11-2016 ATY42_RS04450 da89f0d11bb1c4af2ae09c9e40d9cbb0 370 Pfam PF00534 Glycosyl transferases group 1 193 341 3.9E-13 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS04450 da89f0d11bb1c4af2ae09c9e40d9cbb0 370 Pfam PF13439 Glycosyltransferase Family 4 16 169 9.3E-25 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 Gene3D G3DSA:1.20.200.10 120 389 9.7E-88 T 11-11-2016 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 Gene3D G3DSA:1.10.275.10 2 119 1.1E-46 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 Gene3D G3DSA:1.10.40.30 390 445 1.3E-29 T 11-11-2016 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 451 2.8E-119 T 11-11-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 Pfam PF00206 Lyase 14 312 1.3E-61 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 SUPERFAMILY SSF48557 10 452 3.14E-103 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 1.0E-47 T 11-11-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.3E-17 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.3E-17 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.3E-17 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS09950 4138485acb9fe0aacefc5b3192293d47 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.3E-17 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS20350 a785f87862fa95dbbf0a03ed210f8da1 527 Gene3D G3DSA:3.40.50.720 155 260 2.9E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS20350 a785f87862fa95dbbf0a03ed210f8da1 527 Gene3D G3DSA:3.40.50.720 366 504 2.9E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS20350 a785f87862fa95dbbf0a03ed210f8da1 527 Pfam PF00106 short chain dehydrogenase 174 265 6.0E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS20350 a785f87862fa95dbbf0a03ed210f8da1 527 SUPERFAMILY SSF51735 371 513 6.62E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS20350 a785f87862fa95dbbf0a03ed210f8da1 527 SUPERFAMILY SSF51735 169 268 6.62E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS20350 a785f87862fa95dbbf0a03ed210f8da1 527 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 379 478 2.6E-8 T 11-11-2016 ATY42_RS12890 c59be151ac79744d3cecd58e0cd176df 123 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 123 16.848 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATY42_RS12890 c59be151ac79744d3cecd58e0cd176df 123 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 47 121 1.2E-17 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATY42_RS12890 c59be151ac79744d3cecd58e0cd176df 123 Pfam PF02049 Flagellar hook-basal body complex protein FliE 41 122 2.9E-28 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATY42_RS12890 c59be151ac79744d3cecd58e0cd176df 123 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 52 68 1.3E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATY42_RS12890 c59be151ac79744d3cecd58e0cd176df 123 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 103 1.3E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATY42_RS12890 c59be151ac79744d3cecd58e0cd176df 123 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 108 121 1.3E-11 T 11-11-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ATY42_RS19885 3798d366f3acf1eb101b7cee21c47996 92 SUPERFAMILY SSF117991 6 92 9.94E-19 T 11-11-2016 IPR027471 YbeD-like domain ATY42_RS19885 3798d366f3acf1eb101b7cee21c47996 92 Gene3D G3DSA:3.30.70.1460 9 92 3.7E-15 T 11-11-2016 IPR027471 YbeD-like domain ATY42_RS19885 3798d366f3acf1eb101b7cee21c47996 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 4 92 19.28 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 ATY42_RS19885 3798d366f3acf1eb101b7cee21c47996 92 Pfam PF04359 Protein of unknown function (DUF493) 11 92 1.3E-20 T 11-11-2016 IPR007454 Uncharacterised protein family UPF0250 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 Pfam PF00593 TonB dependent receptor 610 893 1.4E-25 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 Pfam PF07715 TonB-dependent Receptor Plug Domain 71 166 3.7E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 894 1.6E-213 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 SUPERFAMILY SSF56935 264 469 5.13E-82 T 11-11-2016 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 SUPERFAMILY SSF56935 734 894 5.13E-82 T 11-11-2016 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 SUPERFAMILY SSF56935 33 235 5.13E-82 T 11-11-2016 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 SUPERFAMILY SSF56935 513 707 5.13E-82 T 11-11-2016 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 Gene3D G3DSA:2.40.170.20 533 894 1.2E-63 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 Gene3D G3DSA:2.40.170.20 170 483 1.2E-63 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19760 fb59b9f7d5d863b02bd6878dac3bbba6 896 Gene3D G3DSA:2.170.130.10 70 169 8.8E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 503 77.767 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 SUPERFAMILY SSF51735 4 208 3.35E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 207 501 2.0E-107 T 11-11-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 Gene3D G3DSA:3.30.360.10 205 497 1.5E-113 T 11-11-2016 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 205 1.4E-53 T 11-11-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 SUPERFAMILY SSF55347 195 500 1.01E-109 T 11-11-2016 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 Gene3D G3DSA:3.40.50.720 8 204 4.1E-59 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 185 213 2.7E-47 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 255 271 2.7E-47 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 237 254 2.7E-47 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 161 174 2.7E-47 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 342 368 2.7E-47 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 195 201 - T 11-11-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS02185 0a734b1e57124049b68ed222d592d1d9 598 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 502 8.3E-176 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS20995 4bd0aca3bbf6e6495affbdd7802aeecb 74 Pfam PF03466 LysR substrate binding domain 3 73 7.4E-7 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS20995 4bd0aca3bbf6e6495affbdd7802aeecb 74 SUPERFAMILY SSF53850 3 73 1.16E-8 T 11-11-2016 ATY42_RS20995 4bd0aca3bbf6e6495affbdd7802aeecb 74 Gene3D G3DSA:3.40.190.10 2 38 2.3E-5 T 11-11-2016 ATY42_RS08515 cbd708ead9e0f5e060f144a25326c452 55 Pfam PF12760 Transposase zinc-ribbon domain 23 49 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS16855 cbd708ead9e0f5e060f144a25326c452 55 Pfam PF12760 Transposase zinc-ribbon domain 23 49 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 SUPERFAMILY SSF52172 158 275 1.99E-27 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 SMART SM00387 26 136 9.9E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 Gene3D G3DSA:3.40.50.2300 157 275 9.9E-28 T 11-11-2016 ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 Gene3D G3DSA:3.30.565.10 7 139 1.9E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 SUPERFAMILY SSF55874 15 133 5.5E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 SMART SM00448 157 271 2.6E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 Pfam PF00072 Response regulator receiver domain 159 271 1.1E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 134 1.2E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 120 133 1.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 97 115 1.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 63 77 1.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18660 ecfbb82ea7326e6a8e3844535733ad44 276 PRINTS PR00344 Bacterial sensor protein C-terminal signature 81 91 1.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS13475 796204c992d45eabdaa6c0d8bed19d1e 161 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 10 156 31.221 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 ATY42_RS13475 796204c992d45eabdaa6c0d8bed19d1e 161 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 26 154 6.4E-46 T 11-11-2016 IPR003791 Protein of unknown function UPF0178 ATY42_RS10800 521d0bcd71f5d782f43be85a92ebbdd3 169 Pfam PF06853 Protein of unknown function (DUF1249) 31 145 2.4E-27 T 11-11-2016 IPR009659 Protein of unknown function DUF1249 ATY42_RS01425 bbb07ce788799e9fd3017a106ff09fb0 231 Pfam PF13358 DDE superfamily endonuclease 151 231 1.3E-13 T 11-11-2016 ATY42_RS01425 bbb07ce788799e9fd3017a106ff09fb0 231 Pfam PF13551 Winged helix-turn helix 11 57 1.1E-10 T 11-11-2016 ATY42_RS01425 bbb07ce788799e9fd3017a106ff09fb0 231 Pfam PF13592 Winged helix-turn helix 76 133 5.0E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS01425 bbb07ce788799e9fd3017a106ff09fb0 231 SUPERFAMILY SSF46689 9 109 3.58E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Gene3D G3DSA:2.60.40.10 56 107 3.4E-7 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Pfam PF13620 Carboxypeptidase regulatory-like domain 61 123 1.5E-11 T 11-11-2016 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 SUPERFAMILY SSF49452 46 123 1.61E-7 T 11-11-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Gene3D G3DSA:2.40.170.20 312 533 6.5E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Gene3D G3DSA:2.40.170.20 719 1035 6.5E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Gene3D G3DSA:2.40.170.20 572 679 6.5E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Gene3D G3DSA:2.170.130.10 129 263 1.8E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 SUPERFAMILY SSF56935 313 653 3.19E-70 T 11-11-2016 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 SUPERFAMILY SSF56935 714 758 3.19E-70 T 11-11-2016 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 SUPERFAMILY SSF56935 810 925 3.19E-70 T 11-11-2016 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 SUPERFAMILY SSF56935 961 1037 3.19E-70 T 11-11-2016 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 SUPERFAMILY SSF56935 132 271 3.19E-70 T 11-11-2016 ATY42_RS16625 7b797de45bf1467dc64134ac1975ad51 1037 Pfam PF07715 TonB-dependent Receptor Plug Domain 151 251 7.7E-9 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 SUPERFAMILY SSF52279 376 443 5.89E-52 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 SUPERFAMILY SSF52279 611 765 5.89E-52 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 SMART SM01217 799 867 4.2E-26 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Gene3D G3DSA:3.20.20.300 30 350 3.0E-105 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 PRINTS PR00133 Glycosyl hydrolase family 3 signature 187 203 1.5E-9 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 PRINTS PR00133 Glycosyl hydrolase family 3 signature 91 110 1.5E-9 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 PRINTS PR00133 Glycosyl hydrolase family 3 signature 258 276 1.5E-9 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Pfam PF14310 Fibronectin type III-like domain 799 865 2.2E-19 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Gene3D G3DSA:3.40.50.1700 362 442 2.0E-73 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Gene3D G3DSA:3.40.50.1700 611 765 2.0E-73 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 SMART SM00758 459 613 1.3E-24 T 11-11-2016 IPR011658 PA14 domain ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 SUPERFAMILY SSF56988 462 639 8.24E-23 T 11-11-2016 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 376 762 3.2E-60 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Pfam PF07691 PA14 domain 459 612 1.8E-30 T 11-11-2016 IPR011658 PA14 domain ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 53 333 1.9E-43 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS08645 2dabd6c15765b71baeba5220a642f988 889 SUPERFAMILY SSF51445 31 375 1.68E-93 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 Pfam PF13419 Haloacid dehalogenase-like hydrolase 48 199 8.4E-13 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 Gene3D G3DSA:3.40.50.1000 97 228 1.5E-35 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 199 4.0E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 SUPERFAMILY SSF56784 5 228 2.95E-45 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 193 1.0E-13 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.9E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 188 201 1.9E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS02095 a5facdc598e0ac1b475a74ea2c56cf4e 245 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 1.9E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82714 182 265 1.31E-18 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82866 292 490 9.94E-45 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82693 40 134 1.02E-21 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Gene3D G3DSA:1.20.1640.10 286 499 7.3E-55 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82866 795 1016 1.57E-49 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Gene3D G3DSA:3.30.2090.10 181 267 7.2E-24 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Gene3D G3DSA:3.30.70.1430 40 141 4.9E-27 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Gene3D G3DSA:3.30.70.1430 558 649 2.0E-7 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82693 136 181 6.8E-21 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82693 268 324 6.8E-21 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82693 556 653 6.28E-14 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Gene3D G3DSA:3.30.2090.10 709 793 9.9E-21 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1013 6.0E-299 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 SUPERFAMILY SSF82714 709 793 3.4E-19 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 Gene3D G3DSA:1.10.3850.10 801 1013 1.8E-64 T 11-11-2016 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 543 560 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 615 629 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS16995 618cd8fd5f03d59c5dd07790e48e1a23 1041 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.8E-77 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21920 2d46478bf54b568360361469e8c11a22 418 PIRSF PIRSF000524 12 417 4.9E-106 T 11-11-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 ATY42_RS21920 2d46478bf54b568360361469e8c11a22 418 Gene3D G3DSA:3.40.640.10 30 288 5.9E-61 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS21920 2d46478bf54b568360361469e8c11a22 418 Gene3D G3DSA:3.90.1150.10 289 396 1.5E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS21920 2d46478bf54b568360361469e8c11a22 418 Pfam PF00266 Aminotransferase class-V 42 357 2.1E-23 T 11-11-2016 IPR000192 Aminotransferase class V domain ATY42_RS21920 2d46478bf54b568360361469e8c11a22 418 SUPERFAMILY SSF53383 17 394 2.57E-90 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 SUPERFAMILY SSF103263 4 351 1.96E-139 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 Hamap MF_00300 Chorismate synthase [aroC]. 10 354 34.923 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 Pfam PF01264 Chorismate synthase 10 345 2.3E-130 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 Gene3D G3DSA:3.60.150.10 9 352 1.2E-146 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 PIRSF PIRSF001456 3 361 1.0E-129 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.8E-132 T 11-11-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS16390 1aea01e7861ae99667cfa65eb2988d38 367 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-11-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ATY42_RS14235 4649f887dda94644b7142322beac80a7 261 Pfam PF07317 Flagellar regulator YcgR 23 128 6.2E-27 T 11-11-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal ATY42_RS14235 4649f887dda94644b7142322beac80a7 261 Gene3D G3DSA:2.30.110.10 23 131 4.9E-21 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS14235 4649f887dda94644b7142322beac80a7 261 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 18 257 30.063 T 11-11-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 ATY42_RS14235 4649f887dda94644b7142322beac80a7 261 Pfam PF07238 PilZ domain 131 248 9.5E-12 T 11-11-2016 IPR009875 PilZ domain GO:0035438 ATY42_RS14235 4649f887dda94644b7142322beac80a7 261 Gene3D G3DSA:2.40.10.220 132 256 4.1E-14 T 11-11-2016 ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 320 1.4E-10 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 Gene3D G3DSA:3.20.20.450 349 596 1.7E-90 T 11-11-2016 IPR001633 EAL domain ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 Gene3D G3DSA:3.30.70.270 176 321 2.7E-12 T 11-11-2016 ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 SUPERFAMILY SSF55073 180 312 6.04E-9 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 SMART SM00267 163 330 1.5E-4 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 Pfam PF01590 GAF domain 37 144 6.0E-7 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 SMART SM00065 34 177 0.0071 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 SMART SM00052 343 589 7.8E-107 T 11-11-2016 IPR001633 EAL domain ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 SUPERFAMILY SSF55781 35 171 5.1E-21 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 Pfam PF00563 EAL domain 350 584 6.5E-73 T 11-11-2016 IPR001633 EAL domain ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 Gene3D G3DSA:3.30.450.40 33 171 4.6E-8 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS11695 f5e41d72f72ab535f615954edcc5835e 618 SUPERFAMILY SSF141868 357 598 7.19E-84 T 11-11-2016 IPR001633 EAL domain ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 Gene3D G3DSA:3.30.230.10 293 461 3.1E-35 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 SMART SM00382 97 250 2.2E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 SUPERFAMILY SSF52540 74 297 5.32E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 458 5.5E-192 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 Gene3D G3DSA:3.40.50.300 64 283 2.5E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 Pfam PF13481 AAA domain 86 228 1.3E-13 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 89 117 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 180 204 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 10 34 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 219 247 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 328 351 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 130 147 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 PRINTS PR01874 DNA repair protein radA signature 254 280 3.5E-92 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 Pfam PF13541 Subunit ChlI of Mg-chelatase 353 436 3.8E-10 T 11-11-2016 ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 SUPERFAMILY SSF54211 309 461 7.59E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 SUPERFAMILY SSF54211 261 275 7.59E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS08125 aeaee6db1286d0dbdd3f281f1ed68372 463 Hamap MF_01498 DNA repair protein RadA [radA]. 21 462 43.415 T 11-11-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Gene3D G3DSA:3.30.1490.20 3 194 4.1E-67 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 PIRSF PIRSF000854 1 797 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 699 717 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 5 794 0.0 T 11-11-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Gene3D G3DSA:3.50.30.10 373 470 7.8E-34 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 482 793 2.5E-61 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 414 425 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Gene3D G3DSA:3.30.470.20 199 351 5.7E-55 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 752 764 3.0E-6 T 11-11-2016 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 716 731 3.0E-6 T 11-11-2016 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 699 714 3.0E-6 T 11-11-2016 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 SUPERFAMILY SSF56059 3 384 2.35E-101 T 11-11-2016 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 SUPERFAMILY SSF52009 350 466 9.42E-32 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Pfam PF00391 PEP-utilising enzyme, mobile domain 384 455 2.0E-24 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Gene3D G3DSA:3.20.20.60 481 794 1.9E-102 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 SUPERFAMILY SSF51621 462 795 8.38E-95 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS10790 b56ad805e4c40f14b36d65d76b8d7db5 797 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 344 1.1E-111 T 11-11-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ATY42_RS09300 00b89f92d97109b7a1dd65fa6e3c0443 115 Pfam PF01042 Endoribonuclease L-PSP 10 113 8.8E-23 T 11-11-2016 IPR006175 YjgF/YER057c/UK114 family ATY42_RS09300 00b89f92d97109b7a1dd65fa6e3c0443 115 SUPERFAMILY SSF55298 3 114 4.71E-29 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS09300 00b89f92d97109b7a1dd65fa6e3c0443 115 Gene3D G3DSA:3.30.1330.40 10 113 1.6E-22 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 2.9E-6 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 92 112 2.9E-6 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 192 323 2.5E-15 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 SUPERFAMILY SSF111369 190 319 6.41E-12 T 11-11-2016 ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 Pfam PF13533 Biotin-lipoyl like 81 129 1.7E-16 T 11-11-2016 ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 SUPERFAMILY SSF111369 80 170 8.63E-13 T 11-11-2016 ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 Gene3D G3DSA:2.40.50.100 81 114 3.1E-21 T 11-11-2016 ATY42_RS13785 97bc4b2725ab9e17b713550c8617f560 400 Gene3D G3DSA:2.40.50.100 245 280 3.1E-21 T 11-11-2016 ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 Pfam PF04820 Tryptophan halogenase 8 468 1.1E-198 T 11-11-2016 IPR006905 Tryptophan halogenase ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 SUPERFAMILY SSF51905 8 90 1.02E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 SUPERFAMILY SSF51905 326 425 1.02E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 SUPERFAMILY SSF51905 147 241 1.02E-25 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 PIRSF PIRSF011396 1 504 3.7E-196 T 11-11-2016 IPR006905 Tryptophan halogenase ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 Gene3D G3DSA:3.50.50.60 159 239 2.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 Gene3D G3DSA:3.50.50.60 8 75 2.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS01095 ac8df507b9fd3a54004650087759759d 509 Gene3D G3DSA:3.50.50.60 321 365 2.7E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS10455 25585ca7c3f0fc3b84d5fa43d19abdb4 200 ProSitePatterns PS00194 Thioredoxin family active site. 78 96 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ATY42_RS10455 25585ca7c3f0fc3b84d5fa43d19abdb4 200 Pfam PF08534 Redoxin 49 171 1.3E-16 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ATY42_RS10455 25585ca7c3f0fc3b84d5fa43d19abdb4 200 SUPERFAMILY SSF52833 43 183 4.6E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS10455 25585ca7c3f0fc3b84d5fa43d19abdb4 200 Gene3D G3DSA:3.40.30.10 21 185 1.8E-35 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS10455 25585ca7c3f0fc3b84d5fa43d19abdb4 200 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 17 185 4.6E-52 T 11-11-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 ATY42_RS07165 441cf91f641e721fea0f4035d926acd1 633 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 443 600 2.3E-33 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS07165 441cf91f641e721fea0f4035d926acd1 633 Gene3D G3DSA:2.40.50.230 121 208 8.2E-30 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS07165 441cf91f641e721fea0f4035d926acd1 633 SUPERFAMILY SSF69255 114 208 4.19E-25 T 11-11-2016 ATY42_RS07165 441cf91f641e721fea0f4035d926acd1 633 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 278 382 9.3E-34 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 TIGRFAM TIGR00433 bioB: biotin synthase 16 312 1.4E-122 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 Gene3D G3DSA:3.20.20.70 7 316 3.6E-104 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 SUPERFAMILY SSF102114 7 316 8.89E-96 T 11-11-2016 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 Pfam PF04055 Radical SAM superfamily 51 205 7.0E-15 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 SMART SM00876 222 314 2.5E-48 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 PIRSF PIRSF001619 1 320 8.5E-132 T 11-11-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 Hamap MF_01694 Biotin synthase [bioB]. 7 315 41.691 T 11-11-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 SMART SM00729 45 257 1.4E-38 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS02120 be82b6690493ee3123834f4e64b00e14 344 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 222 312 1.1E-19 T 11-11-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ATY42_RS08315 7579f4ca6e96af7fddd2235b35299f68 224 SUPERFAMILY SSF52402 1 221 3.31E-63 T 11-11-2016 ATY42_RS08315 7579f4ca6e96af7fddd2235b35299f68 224 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 5.3E-57 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ATY42_RS08315 7579f4ca6e96af7fddd2235b35299f68 224 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 5.0E-76 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ATY42_RS08315 7579f4ca6e96af7fddd2235b35299f68 224 PIRSF PIRSF006293 1 223 2.0E-77 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ATY42_RS08315 7579f4ca6e96af7fddd2235b35299f68 224 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 56.09 T 11-11-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ATY42_RS08315 7579f4ca6e96af7fddd2235b35299f68 224 Gene3D G3DSA:3.40.50.620 1 222 5.2E-77 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS12215 9102586044a13d490c6b20b4f7eb5792 339 SUPERFAMILY SSF53850 27 335 2.05E-97 T 11-11-2016 ATY42_RS12215 9102586044a13d490c6b20b4f7eb5792 339 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 27 335 1.7E-126 T 11-11-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ATY42_RS12215 9102586044a13d490c6b20b4f7eb5792 339 PIRSF PIRSF002756 4 337 1.1E-108 T 11-11-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 ATY42_RS12215 9102586044a13d490c6b20b4f7eb5792 339 Pfam PF12849 PBP superfamily domain 23 307 7.6E-62 T 11-11-2016 IPR024370 PBP domain ATY42_RS12215 9102586044a13d490c6b20b4f7eb5792 339 Gene3D G3DSA:3.40.190.10 179 336 9.7E-31 T 11-11-2016 ATY42_RS12215 9102586044a13d490c6b20b4f7eb5792 339 Gene3D G3DSA:3.40.190.10 25 175 3.2E-54 T 11-11-2016 ATY42_RS16315 8f67e9861d1beb9e418cf280fa07a801 224 SUPERFAMILY SSF49503 44 136 2.53E-15 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS16315 8f67e9861d1beb9e418cf280fa07a801 224 SUPERFAMILY SSF49464 118 175 5.89E-6 T 11-11-2016 IPR008969 Carboxypeptidase-like, regulatory domain ATY42_RS16315 8f67e9861d1beb9e418cf280fa07a801 224 Gene3D G3DSA:2.60.40.420 51 136 1.8E-10 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 8.1E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 SMART SM00883 2 94 1.7E-51 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 SUPERFAMILY SSF50129 1 94 4.36E-31 T 11-11-2016 IPR011032 GroES-like ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-11-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 Gene3D G3DSA:2.30.33.40 2 94 3.5E-33 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 3 18 3.6E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 60 72 3.6E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 81 94 3.6E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 PRINTS PR00297 10kDa chaperonin signature 25 46 3.6E-32 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS21535 1d3a5a843961f4eb2ac9c91943092571 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 25.406 T 11-11-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ATY42_RS19790 e579c054efc188726285b28d06f3ee55 171 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 1.8E-23 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS19790 e579c054efc188726285b28d06f3ee55 171 Gene3D G3DSA:3.30.70.560 3 150 1.9E-39 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS19790 e579c054efc188726285b28d06f3ee55 171 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 130 3.0E-28 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS19790 e579c054efc188726285b28d06f3ee55 171 SUPERFAMILY SSF55083 1 151 1.12E-38 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS13000 9d1c545de1721eb3808bc1c1c2568df9 130 Pfam PF00072 Response regulator receiver domain 7 119 5.5E-31 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13000 9d1c545de1721eb3808bc1c1c2568df9 130 SUPERFAMILY SSF52172 3 126 2.13E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13000 9d1c545de1721eb3808bc1c1c2568df9 130 SMART SM00448 5 119 6.5E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13000 9d1c545de1721eb3808bc1c1c2568df9 130 Gene3D G3DSA:3.40.50.2300 2 125 3.7E-40 T 11-11-2016 ATY42_RS05005 f49248d5c372979a2b3dbc813cacfeeb 244 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 234 9.8E-92 T 11-11-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS05005 f49248d5c372979a2b3dbc813cacfeeb 244 SUPERFAMILY SSF53098 1 176 1.48E-49 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05005 f49248d5c372979a2b3dbc813cacfeeb 244 Pfam PF00929 Exonuclease 4 166 8.8E-32 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS05005 f49248d5c372979a2b3dbc813cacfeeb 244 Gene3D G3DSA:3.30.420.10 1 175 2.3E-58 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05005 f49248d5c372979a2b3dbc813cacfeeb 244 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 186 3.7E-56 T 11-11-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS05005 f49248d5c372979a2b3dbc813cacfeeb 244 SMART SM00479 2 175 1.2E-42 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS05245 ac31bca96eb7d75b6ba3785a41bf97f0 138 SMART SM00506 1 132 4.8E-17 T 11-11-2016 IPR002589 Macro domain ATY42_RS05245 ac31bca96eb7d75b6ba3785a41bf97f0 138 Gene3D G3DSA:3.40.220.10 2 128 4.2E-12 T 11-11-2016 ATY42_RS05245 ac31bca96eb7d75b6ba3785a41bf97f0 138 Pfam PF01661 Macro domain 18 130 1.5E-20 T 11-11-2016 IPR002589 Macro domain ATY42_RS05245 ac31bca96eb7d75b6ba3785a41bf97f0 138 SUPERFAMILY SSF52949 1 137 1.85E-43 T 11-11-2016 ATY42_RS22220 a296eb33002796b42d0b86efc44df68f 566 SUPERFAMILY SSF75005 52 354 2.09E-84 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS22220 a296eb33002796b42d0b86efc44df68f 566 Gene3D G3DSA:2.115.10.20 51 359 3.9E-86 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS22220 a296eb33002796b42d0b86efc44df68f 566 Pfam PF04616 Glycosyl hydrolases family 43 52 346 3.1E-92 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 ATY42_RS22220 a296eb33002796b42d0b86efc44df68f 566 Gene3D G3DSA:2.60.120.200 377 557 1.6E-41 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ATY42_RS22220 a296eb33002796b42d0b86efc44df68f 566 SUPERFAMILY SSF49899 377 557 1.19E-41 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ATY42_RS19050 e61c586a0a3af742870b5536160ef25e 239 Pfam PF08241 Methyltransferase domain 46 142 1.6E-17 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ATY42_RS19050 e61c586a0a3af742870b5536160ef25e 239 SUPERFAMILY SSF53335 8 148 1.38E-27 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19050 e61c586a0a3af742870b5536160ef25e 239 Gene3D G3DSA:3.40.50.150 43 148 4.9E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS00620 601b3ae89c66854488259186002c6668 315 SUPERFAMILY SSF53098 156 301 6.68E-23 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00620 601b3ae89c66854488259186002c6668 315 Gene3D G3DSA:3.30.420.10 156 301 1.3E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00620 601b3ae89c66854488259186002c6668 315 Pfam PF00665 Integrase core domain 156 258 5.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS09925 62c694ff922e6dd580cfcfbea4b0e272 310 Gene3D G3DSA:3.40.630.30 15 124 9.7E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS09925 62c694ff922e6dd580cfcfbea4b0e272 310 SUPERFAMILY SSF55729 8 140 4.8E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS09925 62c694ff922e6dd580cfcfbea4b0e272 310 Pfam PF13673 Acetyltransferase (GNAT) domain 50 124 1.4E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS09155 24a6131926283a39df8b03c83e6bab1f 57 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 52 20.7 T 11-11-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 ATY42_RS09155 24a6131926283a39df8b03c83e6bab1f 57 PIRSF PIRSF036466 1 55 1.6E-21 T 11-11-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 ATY42_RS09155 24a6131926283a39df8b03c83e6bab1f 57 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 1.8E-10 T 11-11-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Pfam PF05227 CHASE3 domain 44 175 4.3E-15 T 11-11-2016 IPR007891 CHASE3 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 SUPERFAMILY SSF47384 353 436 9.42E-18 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Gene3D G3DSA:1.10.287.130 359 432 1.8E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 4.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 521 535 4.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 4.5E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 SUPERFAMILY SSF55874 425 592 5.11E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 SMART SM00387 481 594 1.0E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Gene3D G3DSA:3.30.450.20 214 339 4.4E-12 T 11-11-2016 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 228 346 1.5E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Gene3D G3DSA:3.30.565.10 437 598 9.4E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 SMART SM00388 368 436 3.1E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 482 592 9.8E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 SUPERFAMILY SSF55785 209 339 6.81E-14 T 11-11-2016 IPR000014 PAS domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Pfam PF13188 PAS domain 225 266 2.3E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS19805 2167deb02ee768c2f868baa2947201f7 603 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 436 3.2E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 SUPERFAMILY SSF56176 351 435 3.27E-23 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 Gene3D G3DSA:3.10.580.10 208 333 5.1E-17 T 11-11-2016 ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 SUPERFAMILY SSF54631 209 341 1.3E-25 T 11-11-2016 ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 Gene3D G3DSA:3.30.465.10 334 435 1.7E-28 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 Pfam PF03471 Transporter associated domain 358 436 5.4E-20 T 11-11-2016 IPR005170 Transporter-associated domain ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 Pfam PF01595 Domain of unknown function DUF21 5 207 1.9E-46 T 11-11-2016 IPR002550 Domain of unknown function DUF21 ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 SMART SM01091 356 437 1.9E-31 T 11-11-2016 IPR005170 Transporter-associated domain ATY42_RS14865 52c4db64359f38b4e0dba0ed357874ad 446 Pfam PF00571 CBS domain 292 340 3.2E-6 T 11-11-2016 IPR000644 CBS domain ATY42_RS09230 9df1d77039fff4543e104bc170964687 372 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 17 348 3.3E-82 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ATY42_RS09230 9df1d77039fff4543e104bc170964687 372 SUPERFAMILY SSF51395 13 370 7.63E-119 T 11-11-2016 ATY42_RS09230 9df1d77039fff4543e104bc170964687 372 Gene3D G3DSA:3.20.20.70 9 370 5.9E-128 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 SMART SM00342 389 474 1.4E-19 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 Gene3D G3DSA:1.10.10.60 373 428 3.9E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 426 470 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 SUPERFAMILY SSF46689 376 423 7.62E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 SUPERFAMILY SSF48452 27 167 2.03E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 Gene3D G3DSA:1.25.40.10 300 336 2.2E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 Gene3D G3DSA:1.25.40.10 30 161 2.2E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06780 7dcb72a27321fd9fae6ac99a22874043 476 Pfam PF12833 Helix-turn-helix domain 395 476 8.8E-17 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS18910 dfe6385dba6229b6d5c545ac4d1033be 163 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 23 137 6.2E-13 T 11-11-2016 IPR007621 TPM domain ATY42_RS07515 d68e122cce02bd329b814db84a693f9c 317 Gene3D G3DSA:3.30.420.10 165 304 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07515 d68e122cce02bd329b814db84a693f9c 317 SUPERFAMILY SSF53098 165 273 3.34E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07515 d68e122cce02bd329b814db84a693f9c 317 Pfam PF13936 Helix-turn-helix domain 3 45 9.1E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS07515 d68e122cce02bd329b814db84a693f9c 317 Pfam PF00665 Integrase core domain 172 267 6.2E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS15325 e95de4fedb8dd6695b520b02293163a8 168 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 161 4.4E-52 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ATY42_RS15325 e95de4fedb8dd6695b520b02293163a8 168 PIRSF PIRSF028301 2 168 1.0E-53 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ATY42_RS15325 e95de4fedb8dd6695b520b02293163a8 168 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 2.4E-51 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Gene3D G3DSA:1.10.150.310 503 634 5.7E-45 T 11-11-2016 IPR023097 Tex RuvX-like domain ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SMART SM00316 653 724 2.2E-25 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Pfam PF09371 Tex-like protein N-terminal domain 14 197 4.5E-66 T 11-11-2016 IPR018974 Tex-like protein, N-terminal ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SUPERFAMILY SSF53098 325 473 5.99E-51 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Pfam PF12836 Helix-hairpin-helix motif 495 559 4.3E-28 T 11-11-2016 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Gene3D G3DSA:1.10.10.650 5 114 5.3E-44 T 11-11-2016 IPR023319 Tex-like protein, HTH domain ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SUPERFAMILY SSF50249 641 728 1.94E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SUPERFAMILY SSF158832 6 324 1.7E-113 T 11-11-2016 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Gene3D G3DSA:1.10.3500.10 115 325 2.4E-92 T 11-11-2016 IPR023323 Tex-like domain ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Gene3D G3DSA:1.10.3500.10 455 500 2.4E-92 T 11-11-2016 IPR023323 Tex-like domain ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Gene3D G3DSA:3.30.420.140 329 454 4.3E-53 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SMART SM00732 329 428 4.2E-35 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SUPERFAMILY SSF47781 474 561 6.23E-27 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 SUPERFAMILY SSF47781 564 636 5.78E-19 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Pfam PF16921 Tex protein YqgF-like domain 329 455 4.5E-54 T 11-11-2016 IPR032639 Tex protein, YqgF-like domain ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Gene3D G3DSA:2.40.50.140 637 724 2.2E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10865 ce7948963d454c0c67eb4973d724d9ee 786 Pfam PF00575 S1 RNA binding domain 653 724 5.7E-21 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS12875 da7a56e39a6dbf6f66d34aaa86663c47 207 Gene3D G3DSA:2.160.10.10 87 194 3.5E-21 T 11-11-2016 ATY42_RS12875 da7a56e39a6dbf6f66d34aaa86663c47 207 SUPERFAMILY SSF51161 43 192 8.46E-27 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS12875 da7a56e39a6dbf6f66d34aaa86663c47 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 178 2.7E-6 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS12875 da7a56e39a6dbf6f66d34aaa86663c47 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 131 3.9E-5 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS05290 75f69b956d6e6f887712d474cdcb357d 363 SUPERFAMILY SSF52540 113 326 1.67E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05290 75f69b956d6e6f887712d474cdcb357d 363 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 38 334 31.01 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 ATY42_RS05290 75f69b956d6e6f887712d474cdcb357d 363 Gene3D G3DSA:3.40.50.300 114 268 2.3E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05290 75f69b956d6e6f887712d474cdcb357d 363 Gene3D G3DSA:1.10.40.50 278 337 6.3E-19 T 11-11-2016 ATY42_RS05290 75f69b956d6e6f887712d474cdcb357d 363 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 86 326 1.7E-42 T 11-11-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 ATY42_RS05290 75f69b956d6e6f887712d474cdcb357d 363 Pfam PF03193 Protein of unknown function, DUF258 96 269 3.0E-47 T 11-11-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 ATY42_RS17750 901cac2cd75f68d31ffa052e204ce85f 150 Gene3D G3DSA:1.10.340.30 48 150 1.8E-19 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS17750 901cac2cd75f68d31ffa052e204ce85f 150 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 125 6.4E-6 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS17750 901cac2cd75f68d31ffa052e204ce85f 150 SUPERFAMILY SSF48150 38 149 1.08E-18 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Gene3D G3DSA:3.30.310.20 197 314 1.8E-32 T 11-11-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SUPERFAMILY SSF55945 197 295 1.4E-22 T 11-11-2016 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Pfam PF06029 AlkA N-terminal domain 197 314 2.2E-32 T 11-11-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Pfam PF12833 Helix-turn-helix domain 108 187 6.1E-21 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SUPERFAMILY SSF46689 139 188 1.34E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 139 181 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SMART SM00478 324 480 8.3E-7 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Gene3D G3DSA:1.10.10.60 139 188 2.5E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Pfam PF02805 Metal binding domain of Ada 11 74 4.9E-25 T 11-11-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Gene3D G3DSA:1.10.340.30 315 430 6.6E-30 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SUPERFAMILY SSF57884 3 84 3.92E-29 T 11-11-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SMART SM00342 102 185 1.8E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Gene3D G3DSA:1.10.1670.10 432 481 6.3E-16 T 11-11-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SUPERFAMILY SSF48150 303 479 1.61E-38 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 320 455 2.8E-5 T 11-11-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Gene3D G3DSA:3.40.10.10 4 85 1.1E-30 T 11-11-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 Gene3D G3DSA:1.10.10.60 86 137 8.7E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07565 c24466933daa4573c754e374b7f92dc0 487 SMART SM01009 197 314 3.9E-44 T 11-11-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 12 596 3.2E-242 T 11-11-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 596 9.0E-43 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Pfam PF00890 FAD binding domain 12 408 4.0E-122 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Gene3D G3DSA:4.10.80.40 543 596 1.1E-27 T 11-11-2016 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Gene3D G3DSA:3.90.700.10 247 352 3.8E-43 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Gene3D G3DSA:3.50.50.60 3 246 2.5E-124 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Gene3D G3DSA:3.50.50.60 354 429 2.5E-124 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 SUPERFAMILY SSF46977 454 596 1.96E-48 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 Gene3D G3DSA:1.20.58.100 439 542 2.0E-36 T 11-11-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 9 596 3.4E-288 T 11-11-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 SUPERFAMILY SSF56425 240 358 4.34E-43 T 11-11-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 PIRSF PIRSF000171 1 586 7.0E-36 T 11-11-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 46 55 - T 11-11-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 SUPERFAMILY SSF51905 362 442 5.12E-77 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS11435 467d66c25ec1d7d5a2ad0fec6556efe9 596 SUPERFAMILY SSF51905 4 263 5.12E-77 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS20785 57276d062e93d6362eb9af050b22fbf3 320 Pfam PF03631 Virulence factor BrkB 32 279 3.2E-50 T 11-11-2016 IPR017039 Virulence factor BrkB ATY42_RS20785 57276d062e93d6362eb9af050b22fbf3 320 PIRSF PIRSF035875 5 296 4.4E-64 T 11-11-2016 IPR017039 Virulence factor BrkB ATY42_RS20785 57276d062e93d6362eb9af050b22fbf3 320 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 278 5.9E-28 T 11-11-2016 IPR017039 Virulence factor BrkB ATY42_RS13560 5a6719027f515d4176ff5f558848d514 445 Pfam PF13742 OB-fold nucleic acid binding domain 12 102 2.5E-27 T 11-11-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ATY42_RS13560 5a6719027f515d4176ff5f558848d514 445 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 356 9.2E-127 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS13560 5a6719027f515d4176ff5f558848d514 445 Pfam PF02601 Exonuclease VII, large subunit 125 438 3.8E-93 T 11-11-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ATY42_RS13560 5a6719027f515d4176ff5f558848d514 445 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 441 30.342 T 11-11-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 Gene3D G3DSA:1.10.287.950 463 667 5.7E-63 T 11-11-2016 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SUPERFAMILY SSF58104 415 696 1.83E-72 T 11-11-2016 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SMART SM00283 448 695 6.0E-94 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SMART SM00304 214 266 1.2E-9 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SMART SM00304 395 447 19.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SMART SM00304 305 356 60.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SUPERFAMILY SSF158472 214 265 1.19E-9 T 11-11-2016 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 623 652 7.5E-60 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 575 604 7.5E-60 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 573 7.5E-60 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 469 498 7.5E-60 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 193 218 7.5E-60 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 182 3.7E-24 T 11-11-2016 IPR024478 4HB MCP domain ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 Pfam PF00672 HAMP domain 195 262 1.5E-14 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 694 2.4E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SUPERFAMILY SSF58104 236 268 7.59E-5 T 11-11-2016 ATY42_RS14200 4ba0986ee6da0ce5eae330ea0688c017 748 SUPERFAMILY SSF58104 324 393 7.59E-5 T 11-11-2016 ATY42_RS00955 f4682db6570ed824995fc6e05dfc7650 458 Pfam PF01609 Transposase DDE domain 284 416 1.5E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00955 f4682db6570ed824995fc6e05dfc7650 458 Pfam PF05598 Transposase domain (DUF772) 59 133 3.1E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS13775 f25a5abe53e570bddebd748c618edc63 497 Pfam PF02321 Outer membrane efflux protein 310 486 1.6E-24 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS13775 f25a5abe53e570bddebd748c618edc63 497 Pfam PF02321 Outer membrane efflux protein 68 277 3.0E-27 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS13775 f25a5abe53e570bddebd748c618edc63 497 Gene3D G3DSA:1.20.1600.10 55 492 7.4E-95 T 11-11-2016 ATY42_RS13775 f25a5abe53e570bddebd748c618edc63 497 SUPERFAMILY SSF56954 2 30 8.11E-94 T 11-11-2016 ATY42_RS13775 f25a5abe53e570bddebd748c618edc63 497 SUPERFAMILY SSF56954 59 490 8.11E-94 T 11-11-2016 ATY42_RS13775 f25a5abe53e570bddebd748c618edc63 497 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 12 488 4.7E-82 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ATY42_RS06685 b62216b946044efa929f347ba9b73d87 253 SUPERFAMILY SSF51621 5 241 1.92E-60 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS06685 b62216b946044efa929f347ba9b73d87 253 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 16 196 9.6E-28 T 11-11-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ATY42_RS06685 b62216b946044efa929f347ba9b73d87 253 Gene3D G3DSA:3.20.20.60 4 240 1.6E-57 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS21180 e4d94c2562af55802c72cb3659c70fd9 158 Gene3D G3DSA:3.40.1280.10 6 157 1.0E-62 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS21180 e4d94c2562af55802c72cb3659c70fd9 158 Pfam PF00588 SpoU rRNA Methylase family 8 145 4.4E-32 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATY42_RS21180 e4d94c2562af55802c72cb3659c70fd9 158 SUPERFAMILY SSF75217 8 156 7.19E-44 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS21180 e4d94c2562af55802c72cb3659c70fd9 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 155 32.459 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ATY42_RS21180 e4d94c2562af55802c72cb3659c70fd9 158 PIRSF PIRSF029256 5 158 3.4E-61 T 11-11-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 Gene3D G3DSA:3.40.50.1700 358 607 1.1E-68 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 SUPERFAMILY SSF51445 3 371 3.05E-100 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 SMART SM01217 641 710 1.6E-30 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 SUPERFAMILY SSF52279 372 607 1.83E-51 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 332 5.4E-70 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 Pfam PF14310 Fibronectin type III-like domain 641 709 1.9E-19 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 372 604 1.3E-51 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 253 270 - T 11-11-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 253 271 3.9E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 81 97 3.9E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 3.9E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 100 119 3.9E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 PRINTS PR00133 Glycosyl hydrolase family 3 signature 146 162 3.9E-19 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS20755 76052cf8f413784c840792af1105cc50 723 Gene3D G3DSA:3.20.20.300 2 350 5.0E-106 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 SUPERFAMILY SSF53474 566 821 7.1E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 Gene3D G3DSA:3.40.50.1820 566 822 7.2E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 SUPERFAMILY SSF82171 226 528 9.22E-14 T 11-11-2016 ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 SUPERFAMILY SSF82171 102 171 9.22E-14 T 11-11-2016 ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 Gene3D G3DSA:2.130.10.10 232 321 7.4E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 Gene3D G3DSA:2.130.10.10 109 180 7.4E-14 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS21880 a8e4f52ce582f6c490f622b385b11e69 835 Pfam PF00326 Prolyl oligopeptidase family 658 822 4.2E-23 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 Gene3D G3DSA:1.10.3210.10 144 313 1.9E-19 T 11-11-2016 IPR006674 HD domain ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 SUPERFAMILY SSF109604 144 314 1.51E-35 T 11-11-2016 ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 SUPERFAMILY SSF52172 3 132 2.42E-33 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 SMART SM00448 4 116 1.8E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 Gene3D G3DSA:3.40.50.2300 6 127 2.6E-34 T 11-11-2016 ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 Pfam PF13487 HD domain 202 264 8.1E-18 T 11-11-2016 ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 Pfam PF00072 Response regulator receiver domain 7 116 6.3E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13875 82d10e5cdade0f0baf585b7a5a766651 328 SMART SM00471 146 283 2.1E-7 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS05125 b887eb1743d02ff4fc3073602404b216 148 Pfam PF02391 MoaE protein 14 125 5.0E-36 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS05125 b887eb1743d02ff4fc3073602404b216 148 Gene3D G3DSA:3.90.1170.40 7 141 2.4E-46 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS05125 b887eb1743d02ff4fc3073602404b216 148 SUPERFAMILY SSF54690 11 144 2.09E-44 T 11-11-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 Pfam PF00672 HAMP domain 171 237 8.5E-7 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 Pfam PF08521 Two-component sensor kinase N-terminal 25 165 1.9E-37 T 11-11-2016 IPR013727 Two-component sensor kinase, N-terminal ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 SMART SM00387 352 460 1.3E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 1.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 1.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 1.7E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 302 1.7E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 Gene3D G3DSA:3.30.565.10 313 457 4.6E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 SUPERFAMILY SSF47384 225 302 6.87E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 SUPERFAMILY SSF55874 296 457 2.88E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 Gene3D G3DSA:1.10.287.130 234 300 5.3E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 SMART SM00388 242 307 1.4E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05350 8644a2a111637b3ac481caf91e2be8cb 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 457 6.3E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 ProSitePatterns PS00194 Thioredoxin family active site. 682 700 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 385 564 5.9E-11 T 11-11-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 SUPERFAMILY SSF52833 672 770 6.65E-12 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Gene3D G3DSA:2.60.40.1250 33 156 8.1E-43 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Gene3D G3DSA:2.60.40.1250 198 316 1.7E-34 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Pfam PF13899 Thioredoxin-like 670 749 2.1E-13 T 11-11-2016 ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Gene3D G3DSA:3.40.30.10 669 772 4.5E-12 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 SUPERFAMILY SSF74863 35 152 2.88E-35 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Pfam PF11412 Disulphide bond corrector protein DsbC 198 313 6.2E-31 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 Pfam PF11412 Disulphide bond corrector protein DsbC 37 151 1.2E-34 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ATY42_RS02680 a22fb35097cb11f3c8dd2349fa7336d9 774 SUPERFAMILY SSF74863 198 314 1.22E-30 T 11-11-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain ATY42_RS08170 999a424ee3983b1e115a67cf11cd3351 258 Pfam PF11218 Protein of unknown function (DUF3011) 37 255 1.4E-73 T 11-11-2016 IPR021381 Protein of unknown function DUF3011 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 310 2.9E-31 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Gene3D G3DSA:3.90.105.10 134 165 1.9E-17 T 11-11-2016 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 SUPERFAMILY SSF53218 180 324 1.44E-41 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Pfam PF00994 Probable molybdopterin binding domain 183 318 1.9E-27 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Pfam PF03453 MoeA N-terminal region (domain I and II) 8 170 1.3E-33 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 SMART SM00852 183 320 2.1E-39 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Gene3D G3DSA:3.40.980.10 166 331 3.7E-60 T 11-11-2016 IPR001453 MoaB/Mog domain ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 SUPERFAMILY SSF63882 4 179 1.31E-48 T 11-11-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Gene3D G3DSA:2.40.340.10 332 402 4.2E-21 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 SUPERFAMILY SSF63867 328 404 4.84E-19 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Pfam PF03454 MoeA C-terminal region (domain IV) 333 403 1.8E-16 T 11-11-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|Reactome: R-HSA-947581 ATY42_RS12530 64860db3e54b6a51620f8d0ae464ad38 406 Gene3D G3DSA:2.170.190.11 52 133 7.2E-28 T 11-11-2016 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 Gene3D G3DSA:2.40.30.30 182 314 1.9E-38 T 11-11-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 Gene3D G3DSA:3.40.50.620 17 181 1.8E-50 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 1.1E-73 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 SUPERFAMILY SSF82114 175 308 5.23E-43 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 Pfam PF01687 Riboflavin kinase 185 306 4.2E-36 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 SMART SM00904 184 307 3.6E-62 T 11-11-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 SUPERFAMILY SSF52374 19 176 5.63E-27 T 11-11-2016 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 Pfam PF06574 FAD synthetase 16 168 1.1E-42 T 11-11-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS07995 e42687f16fc2c564c4b4fc940f45995c 338 PIRSF PIRSF004491 7 314 8.6E-90 T 11-11-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS18230 d9405a6c5d29cfcc392c937d45aa3796 115 Pfam PF09842 Predicted membrane protein (DUF2069) 11 94 1.5E-8 T 11-11-2016 IPR018643 Protein of unknown function DUF2069, membrane ATY42_RS08530 f85c36aec92198c12bbaa08dc113863a 243 Gene3D G3DSA:3.20.20.380 6 242 6.6E-83 T 11-11-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATY42_RS08530 f85c36aec92198c12bbaa08dc113863a 243 SUPERFAMILY SSF110395 6 241 4.05E-67 T 11-11-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATY42_RS08530 f85c36aec92198c12bbaa08dc113863a 243 Pfam PF03932 CutC family 6 204 1.9E-80 T 11-11-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATY42_RS08530 f85c36aec92198c12bbaa08dc113863a 243 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 4 241 38.249 T 11-11-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 PIRSF PIRSF005485 1 341 1.4E-112 T 11-11-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 Gene3D G3DSA:3.30.450.40 176 338 1.1E-38 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 28.056 T 11-11-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 335 2.6E-105 T 11-11-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 SUPERFAMILY SSF55781 71 338 4.76E-59 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 SUPERFAMILY SSF46785 1 82 3.28E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 73 5.1E-6 T 11-11-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 Gene3D G3DSA:1.10.10.10 1 82 4.3E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09845 b6cde917e24c8a0a48460e9fd369d34b 343 Pfam PF01628 HrcA protein C terminal domain 104 323 7.9E-56 T 11-11-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 ATY42_RS06710 72411b6ed0b8a2bbb57b6dec8132365d 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 11-11-2016 IPR010916 TonB box, conserved site ATY42_RS06710 72411b6ed0b8a2bbb57b6dec8132365d 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 1.2E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06710 72411b6ed0b8a2bbb57b6dec8132365d 795 Pfam PF00593 TonB dependent receptor 478 794 1.1E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06710 72411b6ed0b8a2bbb57b6dec8132365d 795 SUPERFAMILY SSF56935 36 795 1.98E-105 T 11-11-2016 ATY42_RS06710 72411b6ed0b8a2bbb57b6dec8132365d 795 Gene3D G3DSA:2.170.130.10 50 172 6.5E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06710 72411b6ed0b8a2bbb57b6dec8132365d 795 Gene3D G3DSA:2.40.170.20 173 795 3.8E-89 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS11345 4c411fa26d56ee6943486c2d173e26eb 210 PIRSF PIRSF000847 1 200 2.3E-43 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 ATY42_RS11345 4c411fa26d56ee6943486c2d173e26eb 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 71 4.5E-18 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS11345 4c411fa26d56ee6943486c2d173e26eb 210 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 191 1.5E-52 T 11-11-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668 ATY42_RS11345 4c411fa26d56ee6943486c2d173e26eb 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS07420 f0250bf0efcd74d4afb3d6e8d3fdac5a 159 Pfam PF05433 Glycine zipper 2TM domain 67 113 4.0E-10 T 11-11-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 206 219 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 SUPERFAMILY SSF51569 8 298 1.34E-94 T 11-11-2016 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 9 513 40.055 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 11-11-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 Pfam PF08502 LeuA allosteric (dimerisation) domain 377 504 3.7E-30 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 SUPERFAMILY SSF110921 417 503 4.32E-21 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 12 501 4.3E-194 T 11-11-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 Gene3D G3DSA:3.20.20.70 7 353 6.5E-139 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 Pfam PF00682 HMGL-like 12 279 1.3E-90 T 11-11-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 ATY42_RS04525 55542d5c24f15178bd581dabb16ccfa2 520 SMART SM00917 376 504 7.1E-29 T 11-11-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ATY42_RS01520 593af32053500e06c86ca4641f642a12 880 Gene3D G3DSA:3.30.379.10 62 185 2.7E-15 T 11-11-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 ATY42_RS01520 593af32053500e06c86ca4641f642a12 880 Pfam PF15979 Glycosyl hydrolase family 115 202 543 7.0E-144 T 11-11-2016 IPR031924 Glycosyl hydrolase family 115 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 28 55 1.1E-67 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 204 231 1.1E-67 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 178 201 1.1E-67 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 147 170 1.1E-67 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 306 331 1.1E-67 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 65 91 1.1E-67 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PIRSF PIRSF500210 1 335 1.8E-124 T 11-11-2016 IPR028343 Fructose-1,6-bisphosphatase GO:0006001|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 PIRSF PIRSF000904 1 336 2.5E-123 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 Gene3D G3DSA:3.30.540.10 5 194 1.8E-71 T 11-11-2016 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 332 45.613 T 11-11-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 SUPERFAMILY SSF56655 4 330 3.81E-112 T 11-11-2016 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 Gene3D G3DSA:3.40.190.80 195 330 3.0E-57 T 11-11-2016 ATY42_RS00080 da42e803b76d963a255b3ae6e0e595d0 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 192 4.2E-60 T 11-11-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 ATY42_RS03950 209a2eb43b84731eae92902efd2b71d8 460 SUPERFAMILY SSF53098 39 424 1.97E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS03950 209a2eb43b84731eae92902efd2b71d8 460 Pfam PF13546 DDE superfamily endonuclease 39 312 2.2E-90 T 11-11-2016 ATY42_RS10200 209a2eb43b84731eae92902efd2b71d8 460 SUPERFAMILY SSF53098 39 424 1.97E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10200 209a2eb43b84731eae92902efd2b71d8 460 Pfam PF13546 DDE superfamily endonuclease 39 312 2.2E-90 T 11-11-2016 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 ProSitePatterns PS01135 FtsZ protein signature 2. 99 120 - T 11-11-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 SMART SM00865 209 327 2.9E-57 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 SUPERFAMILY SSF52490 15 210 1.57E-69 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 328 2.3E-130 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 PRINTS PR00423 Cell division protein FtsZ signature 128 149 3.9E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 PRINTS PR00423 Cell division protein FtsZ signature 191 213 3.9E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 PRINTS PR00423 Cell division protein FtsZ signature 214 235 3.9E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 PRINTS PR00423 Cell division protein FtsZ signature 100 120 3.9E-52 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 SUPERFAMILY SSF55307 206 321 8.01E-43 T 11-11-2016 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 Gene3D G3DSA:3.40.50.1440 16 216 1.5E-91 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 Pfam PF12327 FtsZ family, C-terminal domain 224 318 4.9E-38 T 11-11-2016 IPR024757 Cell division protein FtsZ, C-terminal ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 11 349 37.672 T 11-11-2016 IPR000158 Cell division protein FtsZ GO:0005525 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 174 3.0E-40 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 Gene3D G3DSA:3.30.1330.20 217 321 7.2E-47 T 11-11-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-983189 ATY42_RS19230 053473ca2d7b6a823c8b02d835efcd63 414 SMART SM00864 15 207 5.5E-112 T 11-11-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ATY42_RS05395 809cc0402a33b91792f0136a28fadec1 449 Gene3D G3DSA:1.20.1250.20 249 431 8.0E-19 T 11-11-2016 ATY42_RS05395 809cc0402a33b91792f0136a28fadec1 449 Gene3D G3DSA:1.20.1250.20 26 229 3.4E-24 T 11-11-2016 ATY42_RS05395 809cc0402a33b91792f0136a28fadec1 449 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS05395 809cc0402a33b91792f0136a28fadec1 449 Pfam PF00083 Sugar (and other) transporter 29 227 2.7E-23 T 11-11-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATY42_RS05395 809cc0402a33b91792f0136a28fadec1 449 ProSitePatterns PS00216 Sugar transport proteins signature 1. 303 320 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS05395 809cc0402a33b91792f0136a28fadec1 449 SUPERFAMILY SSF103473 26 432 3.14E-61 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 211 222 - T 11-11-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 Gene3D G3DSA:3.60.10.10 1 254 3.1E-80 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 1.1E-79 T 11-11-2016 ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 247 6.9E-24 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 254 7.3E-74 T 11-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-11-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 ATY42_RS22870 64742dfe30e49bbdf747734e11951bcf 259 SUPERFAMILY SSF56219 1 254 1.83E-74 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS14105 3cb8e543a209382883da78bf6d23771a 601 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 173 1.0E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14105 3cb8e543a209382883da78bf6d23771a 601 Pfam PF00593 TonB dependent receptor 363 599 5.6E-21 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14105 3cb8e543a209382883da78bf6d23771a 601 SUPERFAMILY SSF56935 64 601 2.24E-77 T 11-11-2016 ATY42_RS14105 3cb8e543a209382883da78bf6d23771a 601 Gene3D G3DSA:2.40.170.20 175 601 6.8E-91 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14105 3cb8e543a209382883da78bf6d23771a 601 Gene3D G3DSA:2.170.130.10 39 173 2.4E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS05465 aed35b2779b8a9102698a8c292e608ec 79 Gene3D G3DSA:2.20.28.10 24 78 2.0E-24 T 11-11-2016 IPR004039 Rubredoxin-type fold ATY42_RS05465 aed35b2779b8a9102698a8c292e608ec 79 SUPERFAMILY SSF57802 24 77 1.09E-21 T 11-11-2016 ATY42_RS05465 aed35b2779b8a9102698a8c292e608ec 79 Pfam PF00301 Rubredoxin 28 73 6.0E-21 T 11-11-2016 IPR024935 Rubredoxin domain GO:0005506 ATY42_RS05465 aed35b2779b8a9102698a8c292e608ec 79 PRINTS PR00163 Rubredoxin signature 57 73 3.0E-7 T 11-11-2016 IPR024935 Rubredoxin domain GO:0005506 ATY42_RS05465 aed35b2779b8a9102698a8c292e608ec 79 PRINTS PR00163 Rubredoxin signature 27 43 3.0E-7 T 11-11-2016 IPR024935 Rubredoxin domain GO:0005506 ATY42_RS05465 aed35b2779b8a9102698a8c292e608ec 79 ProSitePatterns PS00202 Rubredoxin signature. 57 67 - T 11-11-2016 IPR018527 Rubredoxin, iron-binding site GO:0046872 ATY42_RS16560 2a8915d1df8fc0ec08e502b77aaa1898 291 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 ATY42_RS16560 2a8915d1df8fc0ec08e502b77aaa1898 291 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 ATY42_RS16560 2a8915d1df8fc0ec08e502b77aaa1898 291 Gene3D G3DSA:1.10.600.10 6 273 1.7E-88 T 11-11-2016 IPR008949 Isoprenoid synthase domain ATY42_RS16560 2a8915d1df8fc0ec08e502b77aaa1898 291 Pfam PF00348 Polyprenyl synthetase 30 257 1.1E-55 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 ATY42_RS16560 2a8915d1df8fc0ec08e502b77aaa1898 291 SUPERFAMILY SSF48576 6 276 1.06E-82 T 11-11-2016 IPR008949 Isoprenoid synthase domain ATY42_RS04455 8a9bd03099fbda9d417d28c37676569d 444 Pfam PF04932 O-Antigen ligase 221 372 4.6E-22 T 11-11-2016 IPR007016 O-antigen ligase-related ATY42_RS21085 b1400885b794a1e2afc69fd8a0027751 414 SUPERFAMILY SSF111369 64 300 3.4E-57 T 11-11-2016 ATY42_RS21085 b1400885b794a1e2afc69fd8a0027751 414 Gene3D G3DSA:2.40.50.100 183 215 2.3E-23 T 11-11-2016 ATY42_RS21085 b1400885b794a1e2afc69fd8a0027751 414 Gene3D G3DSA:2.40.50.100 74 108 2.3E-23 T 11-11-2016 ATY42_RS21085 b1400885b794a1e2afc69fd8a0027751 414 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 377 3.2E-83 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS21085 b1400885b794a1e2afc69fd8a0027751 414 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 74 295 6.4E-21 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS13175 5da599f5b22bfac7182e9fa47512bd5b 421 Gene3D G3DSA:1.20.1250.20 222 400 4.9E-14 T 11-11-2016 ATY42_RS13175 5da599f5b22bfac7182e9fa47512bd5b 421 Gene3D G3DSA:1.20.1250.20 20 198 2.5E-13 T 11-11-2016 ATY42_RS13175 5da599f5b22bfac7182e9fa47512bd5b 421 Pfam PF07690 Major Facilitator Superfamily 25 357 4.5E-16 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS13175 5da599f5b22bfac7182e9fa47512bd5b 421 SUPERFAMILY SSF103473 15 398 1.31E-42 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS18405 4111c4753958637d497a99e64717be60 338 SMART SM01126 154 299 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS18405 4111c4753958637d497a99e64717be60 338 Pfam PF12762 ISXO2-like transposase domain 154 299 3.4E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS18405 4111c4753958637d497a99e64717be60 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS04600 4111c4753958637d497a99e64717be60 338 SMART SM01126 154 299 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04600 4111c4753958637d497a99e64717be60 338 Pfam PF12762 ISXO2-like transposase domain 154 299 3.4E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04600 4111c4753958637d497a99e64717be60 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 PRINTS PR01591 DNA-binding protein FIS signature 18 34 1.0E-8 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 PRINTS PR01591 DNA-binding protein FIS signature 34 49 1.0E-8 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 PRINTS PR01591 DNA-binding protein FIS signature 49 61 1.0E-8 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 PIRSF PIRSF002097 2 90 4.6E-35 T 11-11-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 53 70 5.0E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 70 90 5.0E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 Pfam PF02954 Bacterial regulatory protein, Fis family 47 87 4.3E-14 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 Gene3D G3DSA:1.10.10.60 19 89 4.2E-26 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02615 2d98c7ab7d4611ec6242518d73c4eb42 90 SUPERFAMILY SSF46689 11 89 4.35E-23 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07305 bed382813d4901523f5edf7d0ae52672 209 SUPERFAMILY SSF46689 11 129 7.79E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07305 bed382813d4901523f5edf7d0ae52672 209 Pfam PF13592 Winged helix-turn helix 96 149 1.7E-15 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS07305 bed382813d4901523f5edf7d0ae52672 209 Pfam PF13551 Winged helix-turn helix 18 77 1.1E-14 T 11-11-2016 ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 Gene3D G3DSA:3.90.1150.10 286 417 3.2E-55 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 6.4E-181 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 Gene3D G3DSA:3.40.640.10 37 285 1.1E-106 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 52.41 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 PIRSF PIRSF000412 2 417 6.2E-167 T 11-11-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 SUPERFAMILY SSF53383 8 417 2.95E-179 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS19435 a6801e8109b89f22d41eab761c8abe67 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-11-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ATY42_RS05390 91af098ca7ed04f8096c907d13eaad07 259 Gene3D G3DSA:3.40.190.10 25 154 9.3E-17 T 11-11-2016 ATY42_RS05390 91af098ca7ed04f8096c907d13eaad07 259 Gene3D G3DSA:3.40.190.10 215 248 9.3E-17 T 11-11-2016 ATY42_RS05390 91af098ca7ed04f8096c907d13eaad07 259 SUPERFAMILY SSF53850 27 254 1.23E-38 T 11-11-2016 ATY42_RS05390 91af098ca7ed04f8096c907d13eaad07 259 Pfam PF13531 Bacterial extracellular solute-binding protein 28 253 8.8E-35 T 11-11-2016 ATY42_RS22460 15d656d11d636ea3722098f6d96593ab 96 Pfam PF01381 Helix-turn-helix 14 67 1.2E-12 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS22460 15d656d11d636ea3722098f6d96593ab 96 SUPERFAMILY SSF47413 8 88 9.01E-27 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22460 15d656d11d636ea3722098f6d96593ab 96 Gene3D G3DSA:1.10.260.40 4 81 7.2E-35 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22460 15d656d11d636ea3722098f6d96593ab 96 SMART SM00530 13 68 1.1E-10 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS22460 15d656d11d636ea3722098f6d96593ab 96 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 6 82 3.8E-32 T 11-11-2016 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 ATY42_RS03830 d06a16c75a73b8a189e03998c957955d 295 Gene3D G3DSA:3.90.550.10 4 267 2.8E-64 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03830 d06a16c75a73b8a189e03998c957955d 295 SUPERFAMILY SSF53448 4 288 6.31E-90 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03830 d06a16c75a73b8a189e03998c957955d 295 Pfam PF00483 Nucleotidyl transferase 5 241 6.7E-72 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATY42_RS03830 d06a16c75a73b8a189e03998c957955d 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 289 1.6E-155 T 11-11-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Gene3D G3DSA:3.30.56.50 3 52 1.6E-21 T 11-11-2016 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 SUPERFAMILY SSF52156 689 813 7.32E-34 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 SUPERFAMILY SSF52540 403 572 2.94E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Gene3D G3DSA:3.40.50.300 399 565 5.2E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 407 564 4.5E-31 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Pfam PF11987 Translation-initiation factor 2 692 796 3.4E-35 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 SUPERFAMILY SSF50447 578 661 2.91E-24 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Gene3D G3DSA:3.40.50.10050 706 784 1.0E-25 T 11-11-2016 IPR023115 Translation initiation factor IF- 2, domain 3 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 SUPERFAMILY SSF50447 808 904 2.7E-31 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 70 105 1.5E-8 T 11-11-2016 IPR013575 Initiation factor 2 associated domain, bacterial ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Pfam PF00009 Elongation factor Tu GTP binding domain 410 565 2.8E-33 T 11-11-2016 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 ProSitePatterns PS01176 Initiation factor 2 signature. 857 879 - T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Gene3D G3DSA:2.40.30.10 808 904 1.3E-35 T 11-11-2016 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 323 906 3.4E-245 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 904 16.747 T 11-11-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 329 379 2.2E-14 T 11-11-2016 IPR006847 Translation initiation factor IF-2, N-terminal ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 SUPERFAMILY SSF46955 4 52 1.1E-8 T 11-11-2016 IPR009061 Putative DNA-binding domain ATY42_RS16170 a7a41ed26cc325047ed6633dcdbe7370 906 Gene3D G3DSA:2.40.30.10 578 669 1.6E-20 T 11-11-2016 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 Gene3D G3DSA:3.30.950.10 115 228 8.3E-42 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 SUPERFAMILY SSF53790 5 225 2.36E-78 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 84 95 - T 11-11-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 7 271 1.3E-81 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 PIRSF PIRSF005917 1 273 2.6E-97 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 6 227 37.275 T 11-11-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 206 3.9E-31 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS19315 e02c9d017ac6b757ed536d0301bb8480 273 Gene3D G3DSA:3.40.1010.10 5 114 3.4E-13 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS11880 effe7277697b581ffc6fc4af38bb4083 187 TIGRFAM TIGR01837 PHA_granule_1: poly(hydroxyalkanoate) granule-associated protein 28 144 6.0E-47 T 11-11-2016 IPR008769 Poly granule associated ATY42_RS11880 effe7277697b581ffc6fc4af38bb4083 187 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 20 142 1.1E-39 T 11-11-2016 IPR008769 Poly granule associated ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 53 636 9.0E-74 T 11-11-2016 IPR005674 CocE/Serine esterase GO:0016787 ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 SUPERFAMILY SSF53474 43 404 2.12E-50 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 Gene3D G3DSA:1.10.3020.10 209 280 1.9E-25 T 11-11-2016 ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 384 632 6.3E-37 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 56 342 3.2E-77 T 11-11-2016 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 SMART SM00939 369 633 2.0E-83 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 Gene3D G3DSA:2.60.120.260 398 636 6.2E-87 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 Gene3D G3DSA:3.40.50.1820 281 397 4.8E-85 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 Gene3D G3DSA:3.40.50.1820 7 208 4.8E-85 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13180 cbdcc3c95ffba763974b4b453e4da909 637 SUPERFAMILY SSF49785 398 636 2.55E-72 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS14500 5e1338a7f8be1a360cf13d0b3c188005 182 Pfam PF00665 Integrase core domain 39 129 1.6E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS14500 5e1338a7f8be1a360cf13d0b3c188005 182 SUPERFAMILY SSF53098 27 161 1.52E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14500 5e1338a7f8be1a360cf13d0b3c188005 182 Gene3D G3DSA:3.30.420.10 27 160 4.2E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 Gene3D G3DSA:3.30.70.260 3 82 8.0E-29 T 11-11-2016 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 SUPERFAMILY SSF55021 5 83 7.08E-21 T 11-11-2016 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 1.0E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 110 137 1.0E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 88 110 1.0E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 1.0E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 1.0E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 1.0E-51 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 Pfam PF00551 Formyl transferase 88 264 4.2E-41 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 Gene3D G3DSA:3.40.50.170 87 278 4.9E-58 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 Pfam PF01842 ACT domain 5 66 1.5E-7 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 6.2E-101 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 SUPERFAMILY SSF53328 88 283 4.19E-62 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 PIRSF PIRSF036480 2 283 8.9E-113 T 11-11-2016 ATY42_RS21805 18759977ec2bab8a830009013b0bfe81 283 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 48.042 T 11-11-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 Gene3D G3DSA:3.40.50.720 2 244 7.0E-87 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.0E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.0E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.0E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.0E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 3.0E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.0E-44 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 244 3.2E-123 T 11-11-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.5E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.5E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 SUPERFAMILY SSF51735 4 244 5.56E-83 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 4.1E-5 T 11-11-2016 ATY42_RS13505 2d032b5a027acda68ffa5e30b7731194 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 4.4E-60 T 11-11-2016 ATY42_RS03540 7055a06591a524ab73cf740a47ef5caa 190 Pfam PF01817 Chorismate mutase type II 38 106 2.6E-8 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS03540 7055a06591a524ab73cf740a47ef5caa 190 SMART SM00830 30 108 3.6E-15 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS03540 7055a06591a524ab73cf740a47ef5caa 190 TIGRFAM TIGR01806 CM_mono2: putative chorismate mutase 32 144 4.4E-39 T 11-11-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS03540 7055a06591a524ab73cf740a47ef5caa 190 SUPERFAMILY SSF48600 38 189 5.95E-40 T 11-11-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS03540 7055a06591a524ab73cf740a47ef5caa 190 Gene3D G3DSA:1.20.59.10 38 114 6.6E-9 T 11-11-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS03540 7055a06591a524ab73cf740a47ef5caa 190 PIRSF PIRSF026640 4 190 3.8E-69 T 11-11-2016 IPR008240 Chorismate mutase, periplasmic KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ATY42_RS03655 ba11892d05a07ea307fbde196b02da01 674 Gene3D G3DSA:1.10.1370.10 140 346 5.0E-133 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ATY42_RS03655 ba11892d05a07ea307fbde196b02da01 674 Gene3D G3DSA:1.10.1370.10 500 672 5.0E-133 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ATY42_RS03655 ba11892d05a07ea307fbde196b02da01 674 Pfam PF01432 Peptidase family M3 223 671 2.0E-142 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 ATY42_RS03655 ba11892d05a07ea307fbde196b02da01 674 SUPERFAMILY SSF55486 1 671 1.26E-191 T 11-11-2016 ATY42_RS03655 ba11892d05a07ea307fbde196b02da01 674 Gene3D G3DSA:3.40.390.10 357 499 2.5E-53 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS03655 ba11892d05a07ea307fbde196b02da01 674 Gene3D G3DSA:1.20.1050.40 12 137 3.8E-21 T 11-11-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 124 132 6.6E-6 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 155 166 6.6E-6 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 235 249 6.6E-6 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 Pfam PF08386 TAP-like protein 417 515 1.1E-19 T 11-11-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 Gene3D G3DSA:3.40.50.1820 393 491 1.4E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 Gene3D G3DSA:3.40.50.1820 86 171 1.4E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 Gene3D G3DSA:3.40.50.1820 209 320 1.4E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 SUPERFAMILY SSF53474 357 490 1.42E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 SUPERFAMILY SSF53474 117 172 1.42E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01755 8d58a167a7c772f4e8563c02fe985e32 533 SUPERFAMILY SSF53474 211 265 1.42E-28 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13055 d5d98a17155a7e86c40898e90577ff7c 185 Gene3D G3DSA:1.10.3850.10 2 163 2.0E-43 T 11-11-2016 ATY42_RS13055 d5d98a17155a7e86c40898e90577ff7c 185 Pfam PF00873 AcrB/AcrD/AcrF family 2 162 4.7E-34 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS13055 d5d98a17155a7e86c40898e90577ff7c 185 SUPERFAMILY SSF82866 7 164 3.66E-39 T 11-11-2016 ATY42_RS11740 a33a1649d1c500140c4652f406ecdd52 280 Hamap MF_00158 Pantothenate synthetase [panC]. 3 280 38.106 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ATY42_RS11740 a33a1649d1c500140c4652f406ecdd52 280 Gene3D G3DSA:3.40.50.620 2 175 5.2E-70 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS11740 a33a1649d1c500140c4652f406ecdd52 280 Pfam PF02569 Pantoate-beta-alanine ligase 4 278 4.2E-94 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ATY42_RS11740 a33a1649d1c500140c4652f406ecdd52 280 Gene3D G3DSA:3.30.1300.10 178 279 2.8E-27 T 11-11-2016 ATY42_RS11740 a33a1649d1c500140c4652f406ecdd52 280 SUPERFAMILY SSF52374 3 279 7.41E-99 T 11-11-2016 ATY42_RS11740 a33a1649d1c500140c4652f406ecdd52 280 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 278 5.8E-87 T 11-11-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ATY42_RS02055 3ef01bdddaff640d7ca38f098495bbc8 302 TIGRFAM TIGR00688 rarD: protein RarD 11 264 4.8E-61 T 11-11-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 ATY42_RS02055 3ef01bdddaff640d7ca38f098495bbc8 302 SUPERFAMILY SSF103481 55 148 1.19E-12 T 11-11-2016 ATY42_RS02055 3ef01bdddaff640d7ca38f098495bbc8 302 SUPERFAMILY SSF103481 212 290 1.03E-10 T 11-11-2016 ATY42_RS02055 3ef01bdddaff640d7ca38f098495bbc8 302 Pfam PF00892 EamA-like transporter family 12 147 3.3E-12 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS02055 3ef01bdddaff640d7ca38f098495bbc8 302 Pfam PF00892 EamA-like transporter family 156 288 2.0E-8 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS07800 6f43a63e26b70cae8bc2591fabfbb11b 459 Gene3D G3DSA:3.40.50.300 190 458 2.0E-98 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07800 6f43a63e26b70cae8bc2591fabfbb11b 459 Pfam PF00437 Type II/IV secretion system protein 84 350 2.5E-85 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS07800 6f43a63e26b70cae8bc2591fabfbb11b 459 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 2 459 6.1E-240 T 11-11-2016 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 ATY42_RS07800 6f43a63e26b70cae8bc2591fabfbb11b 459 SUPERFAMILY SSF52540 71 457 7.63E-100 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07800 6f43a63e26b70cae8bc2591fabfbb11b 459 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 278 292 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS07800 6f43a63e26b70cae8bc2591fabfbb11b 459 Gene3D G3DSA:3.30.450.90 69 183 6.0E-51 T 11-11-2016 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 696 5.8E-251 T 11-11-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PIRSF PIRSF005419 8 697 4.2E-234 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 37 50 4.7E-50 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 141 157 4.7E-50 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 160 178 4.7E-50 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 74 93 4.7E-50 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 190 207 4.7E-50 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 241 255 4.7E-50 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS12980 9385a57ef4fa2f93005feadd9557391c 697 Pfam PF00771 FHIPEP family 30 687 3.0E-256 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS19990 f0fed6325665f57cff7834a7e31b485d 166 Pfam PF13673 Acetyltransferase (GNAT) domain 78 155 4.6E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS19990 f0fed6325665f57cff7834a7e31b485d 166 SUPERFAMILY SSF55729 10 160 7.36E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS19990 f0fed6325665f57cff7834a7e31b485d 166 Gene3D G3DSA:3.40.630.30 11 156 7.0E-34 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS16530 27a3511b7fc00a98d49c6d50564f5f0b 163 Pfam PF03061 Thioesterase superfamily 22 95 3.9E-18 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 ATY42_RS16530 27a3511b7fc00a98d49c6d50564f5f0b 163 SUPERFAMILY SSF54637 8 156 5.61E-41 T 11-11-2016 IPR029069 HotDog domain ATY42_RS16530 27a3511b7fc00a98d49c6d50564f5f0b 163 Gene3D G3DSA:3.10.129.10 5 140 2.4E-41 T 11-11-2016 IPR029069 HotDog domain ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 SUPERFAMILY SSF51445 22 373 1.08E-81 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 174 183 - T 11-11-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 34 342 3.7E-56 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 SMART SM00637 404 484 1.0E-6 T 11-11-2016 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 Gene3D G3DSA:3.20.20.80 22 368 7.4E-106 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 SUPERFAMILY SSF49384 398 482 4.05E-19 T 11-11-2016 IPR008965 Carbohydrate-binding domain GO:0030246 ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 Pfam PF00553 Cellulose binding domain 409 482 5.2E-14 T 11-11-2016 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 ATY42_RS20175 aee7cb44a291ebb3289b5be6c4f42c76 484 Gene3D G3DSA:2.60.40.290 405 483 2.4E-18 T 11-11-2016 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain GO:0004553|GO:0030247 ATY42_RS19815 0540af072c2c9c06cdccdb7dc671e67f 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 4.0E-26 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 ATY42_RS19815 0540af072c2c9c06cdccdb7dc671e67f 350 SUPERFAMILY SSF55347 130 284 1.34E-26 T 11-11-2016 ATY42_RS19815 0540af072c2c9c06cdccdb7dc671e67f 350 Gene3D G3DSA:3.40.50.720 1 130 1.1E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19815 0540af072c2c9c06cdccdb7dc671e67f 350 Gene3D G3DSA:3.30.360.10 131 340 9.1E-34 T 11-11-2016 ATY42_RS19815 0540af072c2c9c06cdccdb7dc671e67f 350 SUPERFAMILY SSF51735 3 157 6.43E-50 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19815 0540af072c2c9c06cdccdb7dc671e67f 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 231 4.7E-13 T 11-11-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 ATY42_RS04765 f0c73b3e9e978fa5cad81d133680c6b5 411 Pfam PF01610 Transposase 155 390 3.7E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS04765 f0c73b3e9e978fa5cad81d133680c6b5 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS05835 1829b5997213bcbcdd141c1a92a1b0d0 257 SUPERFAMILY SSF48537 13 252 9.29E-63 T 11-11-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 ATY42_RS05835 1829b5997213bcbcdd141c1a92a1b0d0 257 Pfam PF02265 S1/P1 Nuclease 13 254 3.1E-65 T 11-11-2016 IPR003154 S1/P1 nuclease GO:0003676|GO:0004519|GO:0006308 ATY42_RS05835 1829b5997213bcbcdd141c1a92a1b0d0 257 Gene3D G3DSA:1.10.575.10 13 255 2.6E-71 T 11-11-2016 IPR008947 Phospholipase C/P1 nuclease domain GO:0016788 ATY42_RS04185 9fab3306d5d04c66b4f96687198a822d 344 TIGRFAM TIGR03640 cas1_DVULG: CRISPR-associated endonuclease Cas1, subtype I-C/DVULG 4 343 6.4E-157 T 11-11-2016 IPR019856 CRISPR-associated protein Cas1, DVULG subtype GO:0004520|GO:0043571|GO:0046872 ATY42_RS04185 9fab3306d5d04c66b4f96687198a822d 344 Pfam PF01867 CRISPR associated protein Cas1 8 299 2.7E-103 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 ATY42_RS04185 9fab3306d5d04c66b4f96687198a822d 344 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 329 27.441 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 ATY42_RS04185 9fab3306d5d04c66b4f96687198a822d 344 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 7 336 4.4E-81 T 11-11-2016 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 14 430 2.6E-113 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 Gene3D G3DSA:3.40.47.10 12 131 4.5E-45 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 Gene3D G3DSA:3.40.47.10 219 294 4.5E-45 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 Pfam PF00108 Thiolase, N-terminal domain 12 281 5.6E-53 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 Pfam PF02803 Thiolase, C-terminal domain 290 431 8.7E-32 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 SUPERFAMILY SSF53901 288 431 8.0E-31 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 SUPERFAMILY SSF53901 12 288 6.44E-53 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 PIRSF PIRSF000429 6 431 1.3E-100 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 Gene3D G3DSA:3.40.47.10 172 218 2.7E-46 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS20545 6cd2190827a3642d838be4f27eaad160 431 Gene3D G3DSA:3.40.47.10 296 430 2.7E-46 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 Pfam PF03150 Di-haem cytochrome c peroxidase 66 212 1.0E-28 T 11-11-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 Pfam PF00034 Cytochrome c 221 316 1.2E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 Gene3D G3DSA:1.10.760.10 204 321 3.2E-35 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 SUPERFAMILY SSF46626 48 200 8.16E-30 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 PIRSF PIRSF000294 17 328 4.2E-64 T 11-11-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 SUPERFAMILY SSF46626 199 320 3.63E-34 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS15190 c8ad557bcf99413b886315aaa46d116f 330 Gene3D G3DSA:1.10.760.10 59 203 4.0E-31 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 SMART SM00072 2 184 4.2E-58 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 181 1.8E-70 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 Gene3D G3DSA:3.40.50.300 2 25 1.6E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 Gene3D G3DSA:3.40.50.300 85 200 1.6E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 Hamap MF_00328 Guanylate kinase [gmk]. 1 184 35.625 T 11-11-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 SUPERFAMILY SSF52540 2 187 2.09E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 Pfam PF00625 Guanylate kinase 4 180 7.3E-47 T 11-11-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ATY42_RS05580 cdfac7b807b04450891d77f6553396bc 203 Gene3D G3DSA:3.30.63.10 33 84 5.3E-22 T 11-11-2016 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 Pfam PF01726 LexA DNA binding domain 2 64 1.1E-18 T 11-11-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 125 135 1.5E-8 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 164 176 1.5E-8 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 136 147 1.5E-8 T 11-11-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 SUPERFAMILY SSF46785 1 68 3.84E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 Gene3D G3DSA:1.10.10.10 2 68 4.5E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 Pfam PF00717 Peptidase S24-like 128 193 3.1E-14 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 Hamap MF_00015 LexA repressor [lexA]. 2 212 29.807 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 TIGRFAM TIGR00498 lexA: repressor LexA 2 211 1.7E-52 T 11-11-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 Gene3D G3DSA:2.10.109.10 89 210 4.6E-38 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ATY42_RS14705 d3146087bac1e48693f8b0b9e4fa473f 213 SUPERFAMILY SSF51306 88 210 5.58E-33 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 Gene3D G3DSA:3.20.20.70 8 245 4.0E-84 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 Gene3D G3DSA:1.10.1200.80 255 320 6.7E-20 T 11-11-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 PIRSF PIRSF006621 1 325 4.6E-109 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 3.8E-120 T 11-11-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 Pfam PF01207 Dihydrouridine synthase (Dus) 13 316 1.7E-104 T 11-11-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 11-11-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.902 T 11-11-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 ATY42_RS19045 7775efc660e01a10d07310b275f62696 332 SUPERFAMILY SSF51395 10 318 1.39E-90 T 11-11-2016 ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Pfam PF17092 Penicillin-binding protein OB-like domain 322 418 4.3E-9 T 11-11-2016 IPR031376 Penicillin-binding protein, OB-like domain ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 SUPERFAMILY SSF56601 268 319 2.29E-118 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 SUPERFAMILY SSF56601 417 604 2.29E-118 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 SUPERFAMILY SSF56601 663 786 2.29E-118 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 SUPERFAMILY SSF56601 216 239 2.29E-118 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 SUPERFAMILY SSF53955 47 262 2.81E-69 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Pfam PF00912 Transglycosylase 60 235 8.5E-57 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Gene3D G3DSA:3.40.710.10 664 785 7.2E-128 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Gene3D G3DSA:3.40.710.10 415 607 7.2E-128 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Gene3D G3DSA:3.40.710.10 238 319 7.2E-128 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Gene3D G3DSA:1.10.3810.10 60 237 5.5E-66 T 11-11-2016 ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 69 757 1.3E-172 T 11-11-2016 ATY42_RS05640 f38f8b92b78c08714345fe278e4c0a95 809 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 597 4.2E-23 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATY42_RS15210 74094e16ca37aa43922b6d2993c7347d 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 10 75 1.1E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 Hamap MF_00900 GTPase HflX [hflX]. 27 394 46.608 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 9.3E-27 T 11-11-2016 IPR032305 GTP-binding protein, middle domain ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 Gene3D G3DSA:3.40.50.300 198 364 5.6E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 364 6.9E-146 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 199 358 2.1E-12 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 Pfam PF13167 GTP-binding GTPase N-terminal 26 112 1.2E-30 T 11-11-2016 IPR025121 GTPase HflX, N-terminal ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 PIRSF PIRSF006809 3 424 1.3E-142 T 11-11-2016 IPR016496 GTPase HflX GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 1.5E-12 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.5E-12 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 222 240 1.5E-12 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 SUPERFAMILY SSF52540 199 364 2.19E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14720 ea3b2f9740baa474c6ab0dda840b589d 439 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.1E-21 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS19295 e007d32df52374cfd0433ec3ee7c7d22 148 Pfam PF02381 MraZ protein, putative antitoxin-like 2 75 4.7E-8 T 11-11-2016 IPR020603 MraZ domain ATY42_RS19295 e007d32df52374cfd0433ec3ee7c7d22 148 Pfam PF02381 MraZ protein, putative antitoxin-like 85 133 2.8E-12 T 11-11-2016 IPR020603 MraZ domain ATY42_RS19295 e007d32df52374cfd0433ec3ee7c7d22 148 SUPERFAMILY SSF89447 2 136 1.12E-35 T 11-11-2016 ATY42_RS19295 e007d32df52374cfd0433ec3ee7c7d22 148 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 5.0E-69 T 11-11-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ATY42_RS19295 e007d32df52374cfd0433ec3ee7c7d22 148 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 2 146 5.0E-29 T 11-11-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ATY42_RS19295 e007d32df52374cfd0433ec3ee7c7d22 148 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 148 40.701 T 11-11-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ATY42_RS10535 5baa3cce7c09afc460681a44f05546da 106 Gene3D G3DSA:3.30.70.1500 2 82 7.4E-27 T 11-11-2016 ATY42_RS10535 5baa3cce7c09afc460681a44f05546da 106 SUPERFAMILY SSF82657 3 88 2.88E-25 T 11-11-2016 IPR002634 BolA protein ATY42_RS10535 5baa3cce7c09afc460681a44f05546da 106 Pfam PF01722 BolA-like protein 11 87 1.2E-27 T 11-11-2016 IPR002634 BolA protein ATY42_RS10535 5baa3cce7c09afc460681a44f05546da 106 PIRSF PIRSF003113 1 100 2.6E-26 T 11-11-2016 IPR002634 BolA protein ATY42_RS13850 b2396052e778fe169f4989f640d57016 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 259 296 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS13850 b2396052e778fe169f4989f640d57016 450 Gene3D G3DSA:3.40.640.10 72 349 2.3E-83 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS13850 b2396052e778fe169f4989f640d57016 450 Gene3D G3DSA:3.90.1150.10 351 449 8.3E-42 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS13850 b2396052e778fe169f4989f640d57016 450 Gene3D G3DSA:3.90.1150.10 19 71 8.3E-42 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS13850 b2396052e778fe169f4989f640d57016 450 Pfam PF00202 Aminotransferase class-III 29 446 3.6E-110 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS13850 b2396052e778fe169f4989f640d57016 450 SUPERFAMILY SSF53383 22 447 7.32E-121 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 SUPERFAMILY SSF56534 20 291 2.49E-102 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 26 268 1.8E-103 T 11-11-2016 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 131 142 - T 11-11-2016 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 Gene3D G3DSA:1.10.800.10 24 290 2.9E-98 T 11-11-2016 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 32 251 1.7E-49 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 195 213 2.1E-13 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 88 110 2.1E-13 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ATY42_RS01165 96569bcfc2c06a902ae86a9a85f48b00 296 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 227 246 2.1E-13 T 11-11-2016 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 Gene3D G3DSA:3.40.50.300 209 342 7.8E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 SUPERFAMILY SSF52540 17 341 9.59E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 SMART SM00847 385 481 1.0E-10 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 SMART SM00487 4 188 1.3E-15 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 PIRSF PIRSF005496 1 833 0.0 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 Pfam PF08482 ATP-dependent helicase C-terminal 682 819 3.7E-50 T 11-11-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 Pfam PF04408 Helicase associated domain (HA2) 386 455 1.1E-15 T 11-11-2016 IPR007502 Helicase-associated domain GO:0004386 ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 6 832 0.0 T 11-11-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 Gene3D G3DSA:3.40.50.300 7 164 3.4E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 SMART SM00490 232 330 2.4E-14 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS22765 45bad48cad3626d5809bf83b64f1d9ff 833 Pfam PF00271 Helicase conserved C-terminal domain 211 329 3.3E-14 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS22305 1f749155534d7246b0792f0f07d589cf 329 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS22305 1f749155534d7246b0792f0f07d589cf 329 SMART SM01126 148 290 1.1E-45 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22305 1f749155534d7246b0792f0f07d589cf 329 Pfam PF12762 ISXO2-like transposase domain 148 290 1.9E-30 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS06310 029ce3728499bcd457d93b7128b1c705 179 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 19 158 1.4E-40 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ATY42_RS06310 029ce3728499bcd457d93b7128b1c705 179 Pfam PF03968 OstA-like protein 31 140 1.2E-25 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal ATY42_RS06310 029ce3728499bcd457d93b7128b1c705 179 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 158 23.317 T 11-11-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 ATY42_RS06310 029ce3728499bcd457d93b7128b1c705 179 Gene3D G3DSA:2.60.450.10 20 155 5.5E-30 T 11-11-2016 ATY42_RS01290 3d481ebad19f30a6a3d19880d59e1da3 200 Pfam PF01126 Heme oxygenase 13 194 1.6E-11 T 11-11-2016 IPR016053 Haem oxygenase-like GO:0004392|GO:0006788|GO:0055114 KEGG: 00860+1.14.14.18|Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS01290 3d481ebad19f30a6a3d19880d59e1da3 200 SUPERFAMILY SSF48613 11 194 5.68E-49 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS01290 3d481ebad19f30a6a3d19880d59e1da3 200 Gene3D G3DSA:1.20.910.10 8 195 3.4E-50 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS14845 86565f323d0caa091d104ddb3018e83c 502 Gene3D G3DSA:3.40.50.1820 50 466 3.4E-55 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS14845 86565f323d0caa091d104ddb3018e83c 502 SUPERFAMILY SSF53474 55 486 5.47E-71 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS14845 86565f323d0caa091d104ddb3018e83c 502 ProSitePatterns PS00131 Serine carboxypeptidases, serine active site. 207 214 - T 11-11-2016 IPR018202 Serine carboxypeptidase, serine active site ATY42_RS14845 86565f323d0caa091d104ddb3018e83c 502 Pfam PF00450 Serine carboxypeptidase 94 469 5.0E-19 T 11-11-2016 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 ATY42_RS11470 66eb05a1c04904436e4c7748ebb7c952 335 Gene3D G3DSA:3.30.420.40 5 108 3.6E-37 T 11-11-2016 ATY42_RS11470 66eb05a1c04904436e4c7748ebb7c952 335 TIGRFAM TIGR00749 glk: glucokinase 9 320 4.9E-80 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS11470 66eb05a1c04904436e4c7748ebb7c952 335 Hamap MF_00524 Glucokinase [glk]. 5 326 37.766 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS11470 66eb05a1c04904436e4c7748ebb7c952 335 SUPERFAMILY SSF53067 8 326 6.76E-60 T 11-11-2016 ATY42_RS11470 66eb05a1c04904436e4c7748ebb7c952 335 Gene3D G3DSA:3.40.367.20 109 305 1.2E-65 T 11-11-2016 ATY42_RS11470 66eb05a1c04904436e4c7748ebb7c952 335 Pfam PF02685 Glucokinase 9 324 1.5E-111 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS19410 bc10f9efa12cafef3a9a776e7c1cd62f 207 SUPERFAMILY SSF56935 22 207 2.11E-5 T 11-11-2016 ATY42_RS10265 88b6bf269f85f6d7a2ae57f5bbeb36a2 281 SUPERFAMILY SSF53098 107 268 1.19E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10265 88b6bf269f85f6d7a2ae57f5bbeb36a2 281 Pfam PF13276 HTH-like domain 47 99 2.0E-8 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS10265 88b6bf269f85f6d7a2ae57f5bbeb36a2 281 Gene3D G3DSA:3.30.420.10 107 265 1.4E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10265 88b6bf269f85f6d7a2ae57f5bbeb36a2 281 Pfam PF13683 Integrase core domain 199 264 7.4E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS15890 4d2c91e8b9c3bc006bcee2cbf8ebaeb1 647 Gene3D G3DSA:3.40.50.200 471 557 7.3E-12 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15890 4d2c91e8b9c3bc006bcee2cbf8ebaeb1 647 Gene3D G3DSA:3.40.50.1820 199 251 6.8E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15890 4d2c91e8b9c3bc006bcee2cbf8ebaeb1 647 SUPERFAMILY SSF53474 200 320 8.57E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15890 4d2c91e8b9c3bc006bcee2cbf8ebaeb1 647 PRINTS PR00723 Subtilisin serine protease family (S8) signature 540 553 3.4E-6 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS15890 4d2c91e8b9c3bc006bcee2cbf8ebaeb1 647 PRINTS PR00723 Subtilisin serine protease family (S8) signature 485 504 3.4E-6 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS15890 4d2c91e8b9c3bc006bcee2cbf8ebaeb1 647 SUPERFAMILY SSF52743 469 557 3.14E-11 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS02950 b8423587faa5223af84c8d95c88097aa 424 SUPERFAMILY SSF56349 104 415 3.24E-28 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS02950 b8423587faa5223af84c8d95c88097aa 424 Gene3D G3DSA:1.10.443.10 226 414 9.5E-12 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS02950 b8423587faa5223af84c8d95c88097aa 424 Gene3D G3DSA:1.10.150.130 104 220 6.6E-9 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal ATY42_RS17915 e596ecb801443fdae604eff1dfa28ac1 352 Pfam PF13592 Winged helix-turn helix 105 162 1.0E-17 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS17915 e596ecb801443fdae604eff1dfa28ac1 352 Pfam PF13358 DDE superfamily endonuclease 180 312 4.9E-31 T 11-11-2016 ATY42_RS17915 e596ecb801443fdae604eff1dfa28ac1 352 SUPERFAMILY SSF46689 20 138 1.49E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17915 e596ecb801443fdae604eff1dfa28ac1 352 Pfam PF13551 Winged helix-turn helix 27 86 9.3E-15 T 11-11-2016 ATY42_RS00475 cbd19789f9020ff37f3a6934acf74b21 213 TIGRFAM TIGR02557 HpaP: type III secretion protein HpaP 13 213 8.4E-76 T 11-11-2016 IPR013390 Type III secretion protein HpaP ATY42_RS00475 cbd19789f9020ff37f3a6934acf74b21 213 Pfam PF09483 Type III secretion protein (HpaP) 24 212 2.1E-38 T 11-11-2016 IPR013390 Type III secretion protein HpaP ATY42_RS09080 b706aa6967d7d1f0e9f170510a4b380b 214 PIRSF PIRSF000887 7 210 5.9E-51 T 11-11-2016 IPR024173 Phosphoesterase, MJ0037 ATY42_RS09080 b706aa6967d7d1f0e9f170510a4b380b 214 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 8 208 9.7E-56 T 11-11-2016 IPR026336 Metallophosphoesterase, DNA ligase-associated ATY42_RS09080 b706aa6967d7d1f0e9f170510a4b380b 214 SUPERFAMILY SSF56300 28 159 2.47E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS09080 b706aa6967d7d1f0e9f170510a4b380b 214 Pfam PF00149 Calcineurin-like phosphoesterase 28 121 4.4E-7 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ATY42_RS09080 b706aa6967d7d1f0e9f170510a4b380b 214 Gene3D G3DSA:3.60.21.10 28 159 2.0E-11 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS22605 edcbeb669cceb080dd029b22f5b5f922 190 SMART SM00867 25 185 1.9E-20 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS22605 edcbeb669cceb080dd029b22f5b5f922 190 Pfam PF04264 YceI-like domain 28 180 8.2E-20 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS22605 edcbeb669cceb080dd029b22f5b5f922 190 SUPERFAMILY SSF101874 26 185 3.14E-27 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS22605 edcbeb669cceb080dd029b22f5b5f922 190 Gene3D G3DSA:2.40.128.110 28 188 1.3E-30 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 SUPERFAMILY SSF47729 3 92 1.91E-32 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 Gene3D G3DSA:4.10.520.10 2 92 1.8E-36 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 8.2E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 8.2E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 8.2E-17 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 SMART SM00411 3 92 1.0E-42 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 96 6.9E-48 T 11-11-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.832 T 11-11-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ATY42_RS15985 cd12beb582a25a695fc437b78ad52108 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 5.2E-32 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS08165 8446eb29b1511646244e2eac1716bbe2 97 SMART SM00834 1 42 7.9E-17 T 11-11-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain ATY42_RS08165 8446eb29b1511646244e2eac1716bbe2 97 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 52 3.0E-21 T 11-11-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain ATY42_RS08165 8446eb29b1511646244e2eac1716bbe2 97 Pfam PF09723 Zinc ribbon domain 1 41 3.7E-15 T 11-11-2016 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain ATY42_RS12065 bc114ce8e3aeedf07567da9730551981 228 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 6 225 9.7E-83 T 11-11-2016 IPR012808 Conserved hypothetical protein CHP02453 ATY42_RS12065 bc114ce8e3aeedf07567da9730551981 228 PIRSF PIRSF028451 1 228 3.2E-98 T 11-11-2016 IPR015996 Uncharacterised conserved protein UCP028451 ATY42_RS12065 bc114ce8e3aeedf07567da9730551981 228 Pfam PF09365 Conserved hypothetical protein (DUF2461) 10 219 4.6E-60 T 11-11-2016 IPR012808 Conserved hypothetical protein CHP02453 ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 Gene3D G3DSA:2.40.50.140 5 82 1.9E-9 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 Pfam PF11967 Recombination protein O N terminal 3 78 1.7E-20 T 11-11-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 Hamap MF_00201 DNA repair protein RecO [recO]. 2 236 19.607 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 154 2.0E-21 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 SUPERFAMILY SSF57863 87 153 2.17E-5 T 11-11-2016 ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 Pfam PF02565 Recombination protein O C terminal 85 231 3.4E-16 T 11-11-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ATY42_RS09000 7870e7599fcebf9854cec472ba8d172a 240 SUPERFAMILY SSF50249 3 78 9.25E-12 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS11160 84f03e87e3f7a1ffada8265958584386 76 Gene3D G3DSA:1.20.5.230 31 76 5.4E-29 T 11-11-2016 ATY42_RS11160 84f03e87e3f7a1ffada8265958584386 76 Pfam PF10389 Bacteriophage coat protein B 34 76 8.3E-19 T 11-11-2016 IPR008020 Capsid protein G8P GO:0019028 ATY42_RS11160 84f03e87e3f7a1ffada8265958584386 76 SUPERFAMILY SSF57987 31 76 1.74E-19 T 11-11-2016 ATY42_RS11935 ab5e3f5957bcfd32110b492b7aaa56ad 87 Pfam PF01527 Transposase 2 70 8.2E-20 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS11935 ab5e3f5957bcfd32110b492b7aaa56ad 87 SUPERFAMILY SSF46689 2 66 1.52E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11935 ab5e3f5957bcfd32110b492b7aaa56ad 87 Gene3D G3DSA:1.10.10.60 8 83 1.9E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15525 e384062ec5ab458b637f8c36a9c17488 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS15525 e384062ec5ab458b637f8c36a9c17488 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS15525 e384062ec5ab458b637f8c36a9c17488 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21110 e384062ec5ab458b637f8c36a9c17488 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS21110 e384062ec5ab458b637f8c36a9c17488 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21110 e384062ec5ab458b637f8c36a9c17488 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22935 a74d366a5fa28e19f3da5a47dede8ba9 193 Pfam PF04909 Amidohydrolase 3 191 1.7E-29 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS22935 a74d366a5fa28e19f3da5a47dede8ba9 193 SUPERFAMILY SSF51556 1 192 3.23E-48 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS22935 a74d366a5fa28e19f3da5a47dede8ba9 193 Gene3D G3DSA:3.20.20.140 1 192 3.6E-44 T 11-11-2016 ATY42_RS16220 d287be3028de7cf0d950b7338e87dcac 363 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 229 242 - T 11-11-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16220 d287be3028de7cf0d950b7338e87dcac 363 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 24 357 24.01 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16220 d287be3028de7cf0d950b7338e87dcac 363 Pfam PF00146 NADH dehydrogenase 31 351 3.3E-117 T 11-11-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS04240 d34260d206a6bde7f0b1e0ce0801a33b 146 Gene3D G3DSA:3.30.450.20 42 120 7.1E-8 T 11-11-2016 ATY42_RS04240 d34260d206a6bde7f0b1e0ce0801a33b 146 Pfam PF08670 MEKHLA domain 10 142 2.8E-43 T 11-11-2016 IPR013978 MEKHLA ATY42_RS04240 d34260d206a6bde7f0b1e0ce0801a33b 146 SUPERFAMILY SSF55785 38 121 3.49E-9 T 11-11-2016 IPR000014 PAS domain ATY42_RS06305 7bd75c37be7eb882f8f7308d4705a337 239 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 2 239 9.4E-115 T 11-11-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 ATY42_RS06305 7bd75c37be7eb882f8f7308d4705a337 239 Gene3D G3DSA:3.40.50.300 2 232 3.1E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06305 7bd75c37be7eb882f8f7308d4705a337 239 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 213 234 5.9E-6 T 11-11-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ATY42_RS06305 7bd75c37be7eb882f8f7308d4705a337 239 Pfam PF00005 ABC transporter 18 164 8.6E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS06305 7bd75c37be7eb882f8f7308d4705a337 239 SMART SM00382 26 214 2.7E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06305 7bd75c37be7eb882f8f7308d4705a337 239 SUPERFAMILY SSF52540 2 235 1.27E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 SMART SM00450 208 303 3.7E-14 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 9 103 3.5E-39 T 11-11-2016 IPR004480 Monothiol glutaredoxin-related ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 SUPERFAMILY SSF89360 114 201 6.08E-11 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 Gene3D G3DSA:3.40.250.10 204 304 6.1E-21 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 Pfam PF00581 Rhodanese-like domain 211 299 2.2E-8 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 Gene3D G3DSA:3.40.30.10 11 103 3.3E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 Gene3D G3DSA:2.60.300.12 111 199 3.0E-6 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 Pfam PF00462 Glutaredoxin 20 84 1.9E-18 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 SUPERFAMILY SSF52833 8 104 2.56E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS05260 ff021746f442cc30608757bf18a9d64c 308 SUPERFAMILY SSF52821 201 302 1.57E-20 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS17545 5da86dc4449b5ac093da32bb98aa6700 129 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 17 96 5.0E-21 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS03430 511e721772eb450c7bdefaa5858a47c0 298 SUPERFAMILY SSF103481 48 144 6.41E-16 T 11-11-2016 ATY42_RS03430 511e721772eb450c7bdefaa5858a47c0 298 SUPERFAMILY SSF103481 185 284 3.53E-9 T 11-11-2016 ATY42_RS03430 511e721772eb450c7bdefaa5858a47c0 298 Pfam PF00892 EamA-like transporter family 10 141 8.2E-17 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS03430 511e721772eb450c7bdefaa5858a47c0 298 Pfam PF00892 EamA-like transporter family 154 280 5.3E-9 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS22150 85053578e7a5f2ba7e0ca84f06b11463 75 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 5.8E-23 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ATY42_RS22150 85053578e7a5f2ba7e0ca84f06b11463 75 Pfam PF02416 mttA/Hcf106 family 5 48 9.7E-15 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ATY42_RS22150 85053578e7a5f2ba7e0ca84f06b11463 75 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 69 21.868 T 11-11-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ATY42_RS18215 029e1a45083c5040d6fd5e743f86890c 200 Gene3D G3DSA:3.40.30.10 5 193 1.8E-41 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18215 029e1a45083c5040d6fd5e743f86890c 200 ProSitePatterns PS00194 Thioredoxin family active site. 90 108 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ATY42_RS18215 029e1a45083c5040d6fd5e743f86890c 200 SUPERFAMILY SSF52833 52 192 4.73E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18215 029e1a45083c5040d6fd5e743f86890c 200 SUPERFAMILY SSF52833 11 23 4.73E-33 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18215 029e1a45083c5040d6fd5e743f86890c 200 Pfam PF00578 AhpC/TSA family 65 178 2.1E-16 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATY42_RS07840 4bba06ccdb64bf094a49831f35b2706d 293 Gene3D G3DSA:1.25.40.10 43 167 1.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS07840 4bba06ccdb64bf094a49831f35b2706d 293 Gene3D G3DSA:1.25.40.10 203 244 1.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS07840 4bba06ccdb64bf094a49831f35b2706d 293 SUPERFAMILY SSF48452 42 130 9.07E-9 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS07840 4bba06ccdb64bf094a49831f35b2706d 293 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 12 258 2.5E-79 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD ATY42_RS07840 4bba06ccdb64bf094a49831f35b2706d 293 Pfam PF13525 Outer membrane lipoprotein 40 244 1.1E-56 T 11-11-2016 ATY42_RS07840 4bba06ccdb64bf094a49831f35b2706d 293 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 10 252 34.917 T 11-11-2016 IPR017689 Outer membrane protein assembly factor BamD ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 SUPERFAMILY SSF47413 2 59 4.57E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 SUPERFAMILY SSF53822 64 344 1.06E-63 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-11-2016 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 Pfam PF13377 Periplasmic binding protein-like domain 173 339 5.1E-35 T 11-11-2016 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 3.2E-18 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 Gene3D G3DSA:3.40.50.2300 177 314 1.3E-49 T 11-11-2016 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.5E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.5E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 Gene3D G3DSA:1.10.260.40 2 52 2.7E-24 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 Gene3D G3DSA:3.40.50.2300 53 176 8.6E-22 T 11-11-2016 ATY42_RS19730 81ab517bc50b08edb1f0e58c6cd92bf7 355 SMART SM00354 3 73 3.9E-25 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 Pfam PF05175 Methyltransferase small domain 103 194 4.2E-16 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 SUPERFAMILY SSF53335 20 276 6.57E-57 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 274 1.4E-88 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 Gene3D G3DSA:1.10.8.10 22 86 2.4E-22 T 11-11-2016 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 10 278 43.509 T 11-11-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 16 278 6.4E-71 T 11-11-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ATY42_RS18375 187d22167f48a6e28f2c4bd0c20dbbfb 281 Gene3D G3DSA:3.40.50.150 88 278 1.6E-68 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14995 51c498f9be828d0978ff5c602f6e5a18 176 Pfam PF01292 Prokaryotic cytochrome b561 6 173 9.4E-22 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ATY42_RS14995 51c498f9be828d0978ff5c602f6e5a18 176 SUPERFAMILY SSF81342 7 175 7.38E-28 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 Gene3D G3DSA:3.40.50.270 1 152 2.2E-49 T 11-11-2016 ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 144 4.9E-36 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 SMART SM00226 1 150 8.6E-47 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 SUPERFAMILY SSF52788 1 151 4.19E-48 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 122 137 8.9E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 8.9E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 8.9E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATY42_RS11360 b28ea17b9c94866b1b532948b8a49d6d 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 8.9E-24 T 11-11-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ATY42_RS07985 5c9d0a76c601516a1d76e161ba792704 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.039 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07985 5c9d0a76c601516a1d76e161ba792704 89 Gene3D G3DSA:1.20.58.110 3 87 2.2E-28 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07985 5c9d0a76c601516a1d76e161ba792704 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 1.5E-28 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07985 5c9d0a76c601516a1d76e161ba792704 89 Pfam PF01649 Ribosomal protein S20 2 84 2.5E-26 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07985 5c9d0a76c601516a1d76e161ba792704 89 SUPERFAMILY SSF46992 3 86 2.35E-29 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07985 5c9d0a76c601516a1d76e161ba792704 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 89 4.0E-25 T 11-11-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 PRINTS PR00340 P-II protein signature 83 103 2.8E-40 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 PRINTS PR00340 P-II protein signature 23 41 2.8E-40 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 PRINTS PR00340 P-II protein signature 52 75 2.8E-40 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 PRINTS PR00340 P-II protein signature 2 17 2.8E-40 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 SUPERFAMILY SSF54913 1 112 1.18E-42 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 SMART SM00938 4 105 1.7E-58 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 PIRSF PIRSF039144 1 112 2.6E-49 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 Gene3D G3DSA:3.30.70.120 1 112 5.7E-46 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATY42_RS00920 01b82dc57e3e6ce461044b1c99c7d0a5 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-39 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS20515 b30e9ada210dada03943ceb36e8f73a2 316 SMART SM01126 132 277 7.2E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20515 b30e9ada210dada03943ceb36e8f73a2 316 Pfam PF12760 Transposase zinc-ribbon domain 20 64 1.3E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS20515 b30e9ada210dada03943ceb36e8f73a2 316 Pfam PF12762 ISXO2-like transposase domain 132 277 1.9E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS14175 b16d6e623864063d23c9c9a78bc27e90 297 Pfam PF00665 Integrase core domain 154 246 2.9E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS14175 b16d6e623864063d23c9c9a78bc27e90 297 Pfam PF13936 Helix-turn-helix domain 1 24 8.2E-9 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS14175 b16d6e623864063d23c9c9a78bc27e90 297 Gene3D G3DSA:1.10.10.60 48 93 3.9E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS14175 b16d6e623864063d23c9c9a78bc27e90 297 Gene3D G3DSA:3.30.420.10 144 286 4.1E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14175 b16d6e623864063d23c9c9a78bc27e90 297 SUPERFAMILY SSF53098 144 287 1.52E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10495 856a7998cb5a2b07ec312e1755235b19 267 SUPERFAMILY SSF56317 1 260 1.57E-57 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS10495 856a7998cb5a2b07ec312e1755235b19 267 Gene3D G3DSA:3.60.110.10 1 261 2.1E-57 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS10495 856a7998cb5a2b07ec312e1755235b19 267 Pfam PF00795 Carbon-nitrogen hydrolase 32 244 9.7E-28 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS04885 474d2e099ba690468c45cc64fbd0a28b 335 SMART SM01329 4 331 2.6E-178 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04885 474d2e099ba690468c45cc64fbd0a28b 335 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 325 1.1E-104 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04885 474d2e099ba690468c45cc64fbd0a28b 335 Gene3D G3DSA:3.40.718.10 1 335 1.7E-132 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04885 474d2e099ba690468c45cc64fbd0a28b 335 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 227 246 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04885 474d2e099ba690468c45cc64fbd0a28b 335 SUPERFAMILY SSF53659 1 335 1.48E-123 T 11-11-2016 ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 Pfam PF00271 Helicase conserved C-terminal domain 238 336 3.5E-27 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 Gene3D G3DSA:3.40.50.300 214 365 4.2E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 SMART SM00382 38 209 0.0029 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 Pfam PF00270 DEAD/DEAH box helicase 26 189 1.7E-44 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 Pfam PF03880 DbpA RNA binding domain 386 456 1.5E-22 T 11-11-2016 IPR005580 DbpA, RNA-binding domain ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 SUPERFAMILY SSF52540 71 352 4.07E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 SMART SM00490 255 336 3.3E-29 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 Gene3D G3DSA:3.40.50.300 1 208 5.2E-73 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATY42_RS13445 66532eb55a984c3a2b576cfa3478867f 458 SMART SM00487 21 219 4.0E-55 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 Gene3D G3DSA:3.50.50.60 2 195 7.3E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 Pfam PF13454 FAD-NAD(P)-binding 7 149 1.0E-23 T 11-11-2016 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 Pfam PF00890 FAD binding domain 395 424 3.2E-5 T 11-11-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 Gene3D G3DSA:3.50.50.60 196 247 1.7E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 Gene3D G3DSA:3.50.50.60 322 447 1.7E-6 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 SUPERFAMILY SSF51905 1 218 1.05E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 SUPERFAMILY SSF51905 186 270 2.55E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00230 b21630e8d57c3f8a9f8311263fc2fddb 469 SUPERFAMILY SSF51905 303 445 2.55E-7 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS22780 c414af4699c6fc024b6e7640fd61c099 285 Gene3D G3DSA:3.90.850.10 66 280 4.8E-91 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS22780 c414af4699c6fc024b6e7640fd61c099 285 SUPERFAMILY SSF56529 60 279 3.14E-85 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS22780 c414af4699c6fc024b6e7640fd61c099 285 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 72 278 4.2E-74 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.5E-7 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.5E-7 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.5E-7 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 521 1.8E-149 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 SUPERFAMILY SSF52317 4 201 3.64E-55 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Pfam PF02540 NAD synthase 214 296 2.4E-8 T 11-11-2016 IPR022310 NAD/GMP synthase ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Pfam PF00958 GMP synthase C terminal domain 429 520 1.4E-42 T 11-11-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Pfam PF00117 Glutamine amidotransferase class-I 11 196 1.9E-39 T 11-11-2016 IPR017926 Glutamine amidotransferase ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 521 55.27 T 11-11-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Gene3D G3DSA:3.40.50.620 219 395 6.1E-58 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00097 Anthranilate synthase component II signature 80 91 3.5E-6 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00097 Anthranilate synthase component II signature 53 62 3.5E-6 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 PRINTS PR00097 Anthranilate synthase component II signature 173 186 3.5E-6 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 SUPERFAMILY SSF52402 193 415 3.75E-58 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 200 4.9E-75 T 11-11-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Gene3D G3DSA:3.30.300.10 397 521 5.6E-52 T 11-11-2016 ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 Gene3D G3DSA:3.40.50.880 3 218 6.0E-58 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS10700 f357fa348f126384f33df1b1924acd47 521 SUPERFAMILY SSF54810 401 521 1.7E-49 T 11-11-2016 ATY42_RS21055 c719f7b3f5b70e264233ce4defaf79c8 453 Pfam PF13546 DDE superfamily endonuclease 32 305 5.2E-91 T 11-11-2016 ATY42_RS21055 c719f7b3f5b70e264233ce4defaf79c8 453 SUPERFAMILY SSF53098 32 417 9.1E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS03940 c719f7b3f5b70e264233ce4defaf79c8 453 Pfam PF13546 DDE superfamily endonuclease 32 305 5.2E-91 T 11-11-2016 ATY42_RS03940 c719f7b3f5b70e264233ce4defaf79c8 453 SUPERFAMILY SSF53098 32 417 9.1E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15165 12b98778aae51ce7e82afc483280ec81 89 SUPERFAMILY SSF46689 19 82 7.35E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15165 12b98778aae51ce7e82afc483280ec81 89 Gene3D G3DSA:1.10.10.60 18 85 5.5E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15165 12b98778aae51ce7e82afc483280ec81 89 Pfam PF01527 Transposase 15 72 2.9E-14 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 SUPERFAMILY SSF49785 356 485 1.28E-14 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 SUPERFAMILY SSF49785 513 625 1.84E-13 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 Gene3D G3DSA:2.60.120.260 361 485 3.0E-13 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 Gene3D G3DSA:2.60.120.260 502 639 4.5E-16 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 Pfam PF00754 F5/8 type C domain 518 623 6.6E-10 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 Pfam PF00754 F5/8 type C domain 367 472 1.3E-8 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 Gene3D G3DSA:3.20.20.80 36 355 2.2E-85 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 Pfam PF01120 Alpha-L-fucosidase 39 351 9.2E-35 T 11-11-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 SMART SM00812 38 417 2.4E-12 T 11-11-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 ATY42_RS08895 76777664468ad14cb4049e5d7d3596d1 643 SUPERFAMILY SSF51445 36 354 3.26E-84 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS18020 35e9963a5d84015a8685389d48c3db64 113 Gene3D G3DSA:3.90.470.10 3 111 3.7E-41 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18020 35e9963a5d84015a8685389d48c3db64 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 7 109 3.3E-45 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18020 35e9963a5d84015a8685389d48c3db64 113 SUPERFAMILY SSF54843 2 110 1.57E-41 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18020 35e9963a5d84015a8685389d48c3db64 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 85 109 - T 11-11-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18020 35e9963a5d84015a8685389d48c3db64 113 Pfam PF00237 Ribosomal protein L22p/L17e 10 109 7.5E-32 T 11-11-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18020 35e9963a5d84015a8685389d48c3db64 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 3 112 28.306 T 11-11-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS22080 6025341f4ded4bce6ad6ef9c07a54960 364 Gene3D G3DSA:3.40.50.300 16 171 8.4E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22080 6025341f4ded4bce6ad6ef9c07a54960 364 SUPERFAMILY SSF52540 51 176 1.88E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22080 6025341f4ded4bce6ad6ef9c07a54960 364 Pfam PF03969 AFG1-like ATPase 4 359 1.9E-126 T 11-11-2016 IPR005654 ATPase, AFG1-like GO:0005524 ATY42_RS22080 6025341f4ded4bce6ad6ef9c07a54960 364 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 364 49.242 T 11-11-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 ATY42_RS22920 03d13ecc61da0d59ac926b058146d839 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 13.714 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS22920 03d13ecc61da0d59ac926b058146d839 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-23 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS22920 03d13ecc61da0d59ac926b058146d839 55 Pfam PF00471 Ribosomal protein L33 8 53 1.2E-17 T 11-11-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS22920 03d13ecc61da0d59ac926b058146d839 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 11-11-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS22920 03d13ecc61da0d59ac926b058146d839 55 SUPERFAMILY SSF57829 1 53 2.56E-19 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 ProSitePatterns PS01219 Ammonium transporters signature. 235 260 - T 11-11-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 SUPERFAMILY SSF111352 73 459 1.44E-122 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 Gene3D G3DSA:1.10.3430.10 71 459 1.0E-134 T 11-11-2016 IPR029020 Ammonium/urea transporter ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 Pfam PF00909 Ammonium Transporter Family 79 478 1.5E-118 T 11-11-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 PRINTS PR00342 Rhesus blood group protein signature 274 292 1.6E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 PRINTS PR00342 Rhesus blood group protein signature 178 194 1.6E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 PRINTS PR00342 Rhesus blood group protein signature 305 327 1.6E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 PRINTS PR00342 Rhesus blood group protein signature 360 378 1.6E-6 T 11-11-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ATY42_RS22540 4e3f1136eccccd93c202a985f7a30d16 480 TIGRFAM TIGR00836 amt: ammonium transporter 77 478 8.8E-130 T 11-11-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SMART SM00388 160 230 2.3E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SMART SM00387 271 396 7.0E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 Gene3D G3DSA:3.40.50.2300 414 534 1.5E-32 T 11-11-2016 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 Pfam PF13426 PAS domain 49 143 4.2E-22 T 11-11-2016 IPR000014 PAS domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 Gene3D G3DSA:3.30.565.10 207 395 4.6E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 278 394 3.1E-18 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SMART SM00448 416 529 1.0E-19 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SUPERFAMILY SSF55785 35 145 1.08E-28 T 11-11-2016 IPR000014 PAS domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SUPERFAMILY SSF52172 415 534 6.4E-27 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SUPERFAMILY SSF47384 151 227 3.34E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SUPERFAMILY SSF55874 220 394 1.27E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 27 152 1.5E-18 T 11-11-2016 IPR000014 PAS domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SMART SM00091 28 97 3.2E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 339 4.4E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 393 4.4E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 374 4.4E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 353 4.4E-16 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 Gene3D G3DSA:3.30.450.20 41 145 2.0E-35 T 11-11-2016 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 Pfam PF00072 Response regulator receiver domain 418 530 7.9E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15795 55e298d0814d6e49973426d27e0ba15f 540 SMART SM00086 103 145 3.2E-8 T 11-11-2016 IPR001610 PAC motif ATY42_RS11485 3221770b3e698a59deec063599df0942 219 Gene3D G3DSA:3.20.20.70 5 217 3.8E-70 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS11485 3221770b3e698a59deec063599df0942 219 SUPERFAMILY SSF51569 7 213 4.4E-62 T 11-11-2016 ATY42_RS11485 3221770b3e698a59deec063599df0942 219 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 42 51 - T 11-11-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ATY42_RS11485 3221770b3e698a59deec063599df0942 219 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 211 1.6E-78 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ATY42_RS11485 3221770b3e698a59deec063599df0942 219 Pfam PF01081 KDPG and KHG aldolase 11 203 1.2E-63 T 11-11-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 PIRSF PIRSF000164 14 344 1.3E-96 T 11-11-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 SUPERFAMILY SSF51395 1 338 7.66E-102 T 11-11-2016 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 Pfam PF01180 Dihydroorotate dehydrogenase 48 335 5.4E-90 T 11-11-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 79 98 - T 11-11-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 336 50.026 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 340 1.0E-125 T 11-11-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS10935 32a58d2e5a48a38fc4a02b5579cfa8a2 351 Gene3D G3DSA:3.20.20.70 1 338 3.2E-125 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 268 9.6E-102 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 288 41.23 T 11-11-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 4.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 4.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 4.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 4.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 4.1E-13 T 11-11-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 Gene3D G3DSA:3.40.50.620 170 219 2.0E-40 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 Gene3D G3DSA:3.40.50.620 7 71 2.0E-40 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 SUPERFAMILY SSF52374 6 280 4.86E-81 T 11-11-2016 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 Gene3D G3DSA:3.90.800.10 72 168 7.6E-14 T 11-11-2016 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 125 233 5.0E-22 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 ATY42_RS13500 52d841d23ceda53cfac1b882646be140 299 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 109 9.5E-25 T 11-11-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 577 1.0E-140 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 Pfam PF01019 Gamma-glutamyltranspeptidase 62 578 4.7E-166 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 474 491 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 451 466 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 69 94 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 161 180 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 410 428 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 275 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 143 161 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 289 308 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 386 404 1.6E-65 T 11-11-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 ATY42_RS12400 b7369df4ac3ca35636097497b23161fb 597 SUPERFAMILY SSF56235 41 578 3.09E-166 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS19995 b793bade29ff0d33d571265fee53450f 106 Gene3D G3DSA:3.30.420.10 36 79 1.1E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11765 29072e397368238425791f9cfc118e59 306 Gene3D G3DSA:3.10.270.10 196 294 2.1E-75 T 11-11-2016 ATY42_RS11765 29072e397368238425791f9cfc118e59 306 Gene3D G3DSA:3.10.270.10 4 163 2.1E-75 T 11-11-2016 ATY42_RS11765 29072e397368238425791f9cfc118e59 306 Pfam PF02649 Type I GTP cyclohydrolase folE2 5 292 7.2E-68 T 11-11-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 ATY42_RS11765 29072e397368238425791f9cfc118e59 306 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 5 297 33.02 T 11-11-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442 ATY42_RS08445 bf156a846ce1ff507a4480131baf1104 304 SUPERFAMILY SSF101478 7 299 6.8E-71 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 ATY42_RS08445 bf156a846ce1ff507a4480131baf1104 304 Pfam PF03747 ADP-ribosylglycohydrolase 12 278 1.3E-60 T 11-11-2016 IPR005502 ADP-ribosylation/Crystallin J1 ATY42_RS02865 e86d878d7235d81ea35a403fe3e1f37f 146 Gene3D G3DSA:3.50.80.10 1 144 8.4E-54 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain ATY42_RS02865 e86d878d7235d81ea35a403fe3e1f37f 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 144 6.4E-51 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ATY42_RS02865 e86d878d7235d81ea35a403fe3e1f37f 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 33.61 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ATY42_RS02865 e86d878d7235d81ea35a403fe3e1f37f 146 SUPERFAMILY SSF69500 1 144 2.88E-52 T 11-11-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain ATY42_RS02865 e86d878d7235d81ea35a403fe3e1f37f 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 3.2E-51 T 11-11-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 SUPERFAMILY SSF52540 4 429 2.87E-174 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 SMART SM00788 4 424 3.7E-286 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 5.0E-176 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 Gene3D G3DSA:3.90.170.10 267 425 5.0E-66 T 11-11-2016 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 Gene3D G3DSA:1.10.300.10 104 196 3.6E-34 T 11-11-2016 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 Gene3D G3DSA:3.40.440.10 197 266 5.3E-69 T 11-11-2016 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 Gene3D G3DSA:3.40.440.10 3 94 5.3E-69 T 11-11-2016 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 Pfam PF00709 Adenylosuccinate synthetase 5 422 1.0E-172 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 207.451 T 11-11-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-11-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATY42_RS04410 26a54fa0595bb3eee47c708f0c23656a 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-11-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ATY42_RS13480 7db79ef5f32f00f92b2c4c8e7981b0a7 182 Gene3D G3DSA:3.10.640.10 1 177 7.8E-75 T 11-11-2016 ATY42_RS13480 7db79ef5f32f00f92b2c4c8e7981b0a7 182 PIRSF PIRSF011484 1 179 1.3E-63 T 11-11-2016 IPR009822 YaeQ ATY42_RS13480 7db79ef5f32f00f92b2c4c8e7981b0a7 182 SMART SM01322 1 176 8.1E-107 T 11-11-2016 IPR009822 YaeQ ATY42_RS13480 7db79ef5f32f00f92b2c4c8e7981b0a7 182 Pfam PF07152 YaeQ protein 1 172 3.2E-71 T 11-11-2016 IPR009822 YaeQ ATY42_RS13480 7db79ef5f32f00f92b2c4c8e7981b0a7 182 SUPERFAMILY SSF52980 5 178 1.5E-67 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 SUPERFAMILY SSF56935 267 465 3.97E-74 T 11-11-2016 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 SUPERFAMILY SSF56935 20 228 3.97E-74 T 11-11-2016 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 SUPERFAMILY SSF56935 507 860 3.97E-74 T 11-11-2016 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 Pfam PF00593 TonB dependent receptor 583 861 1.6E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 156 1.1E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 Gene3D G3DSA:2.170.130.10 51 158 3.6E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 Gene3D G3DSA:2.40.170.20 502 861 1.5E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 Gene3D G3DSA:2.40.170.20 159 317 1.5E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 Gene3D G3DSA:2.40.170.20 369 466 1.5E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS00740 52367830f8aa326a88c7b24d0dfb667c 862 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 31 861 2.1E-186 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS17510 6c76e2eb23b8aa903794d7df0f10442f 166 PIRSF PIRSF028301 2 166 5.8E-67 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ATY42_RS17510 6c76e2eb23b8aa903794d7df0f10442f 166 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 163 1.4E-60 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ATY42_RS17510 6c76e2eb23b8aa903794d7df0f10442f 166 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 165 2.2E-59 T 11-11-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 ATY42_RS19125 6b11f9112abbf46232ced29a606cb4d3 228 SUPERFAMILY SSF52540 5 190 4.91E-21 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 Pfam PF00271 Helicase conserved C-terminal domain 266 370 4.0E-12 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 Pfam PF00270 DEAD/DEAH box helicase 28 214 5.4E-24 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 Gene3D G3DSA:3.40.50.300 263 389 2.7E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 Gene3D G3DSA:3.40.50.300 16 217 2.6E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 PIRSF PIRSF037307 10 831 2.9E-138 T 11-11-2016 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 SUPERFAMILY SSF52540 244 385 9.46E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 SUPERFAMILY SSF52540 33 216 9.46E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 SMART SM00487 22 244 1.9E-24 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 Pfam PF08494 DEAD/H associated 612 799 3.5E-48 T 11-11-2016 IPR013701 DEAD/H associated GO:0005524|GO:0016818 ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 15 828 0.0 T 11-11-2016 IPR026362 DEXH box helicase, DNA ligase-associated ATY42_RS09085 764c55070d812109423cc0ebce86cdf4 833 SMART SM00490 293 375 4.4E-15 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 SMART SM01002 148 310 2.9E-74 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 Gene3D G3DSA:3.50.50.60 175 196 6.5E-5 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 Gene3D G3DSA:3.40.50.1770 197 353 1.6E-27 T 11-11-2016 ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 SUPERFAMILY SSF51735 139 314 9.78E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 SUPERFAMILY SSF52283 5 170 1.36E-41 T 11-11-2016 ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 143 354 7.3E-61 T 11-11-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 SMART SM01003 6 139 5.0E-48 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 11-11-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 7 139 3.1E-33 T 11-11-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ATY42_RS18315 41109cbc72d31d25c8d714b99459b609 365 Gene3D G3DSA:3.40.50.1770 4 174 8.7E-51 T 11-11-2016 ATY42_RS08460 c94b3d9b848a7310b631fbebf1d3feea 133 Pfam PF00072 Response regulator receiver domain 16 128 1.0E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08460 c94b3d9b848a7310b631fbebf1d3feea 133 SUPERFAMILY SSF52172 13 131 2.7E-36 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS08460 c94b3d9b848a7310b631fbebf1d3feea 133 Gene3D G3DSA:3.40.50.2300 13 131 1.2E-36 T 11-11-2016 ATY42_RS08460 c94b3d9b848a7310b631fbebf1d3feea 133 SMART SM00448 14 127 8.4E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07865 1342c23205b36df990f3406a5a7fa60a 455 Gene3D G3DSA:3.40.50.2000 238 437 4.5E-73 T 11-11-2016 ATY42_RS07865 1342c23205b36df990f3406a5a7fa60a 455 Gene3D G3DSA:3.40.50.2000 1 237 4.9E-62 T 11-11-2016 ATY42_RS07865 1342c23205b36df990f3406a5a7fa60a 455 Pfam PF00982 Glycosyltransferase family 20 16 453 5.9E-120 T 11-11-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 ATY42_RS07865 1342c23205b36df990f3406a5a7fa60a 455 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 453 1.1E-180 T 11-11-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 ATY42_RS07865 1342c23205b36df990f3406a5a7fa60a 455 SUPERFAMILY SSF53756 2 454 5.84E-140 T 11-11-2016 ATY42_RS09835 3eeb89998a9e0e1085951845a21f11bc 136 Gene3D G3DSA:1.10.10.10 4 81 2.4E-29 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09835 3eeb89998a9e0e1085951845a21f11bc 136 SUPERFAMILY SSF46785 6 131 3.84E-38 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09835 3eeb89998a9e0e1085951845a21f11bc 136 Pfam PF01475 Ferric uptake regulator family 9 129 2.5E-42 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82866 290 489 1.83E-46 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Gene3D G3DSA:3.30.70.1430 40 139 5.4E-26 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82693 137 181 3.27E-21 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82693 268 324 3.27E-21 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.6E-62 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Gene3D G3DSA:3.30.2090.10 712 790 6.4E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Gene3D G3DSA:3.30.2090.10 181 266 4.4E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82693 40 134 1.91E-21 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82714 712 793 7.19E-17 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Gene3D G3DSA:3.30.70.1440 661 707 3.0E-5 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Gene3D G3DSA:1.10.3850.10 800 1014 9.9E-45 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Gene3D G3DSA:1.10.3850.10 275 491 1.8E-56 T 11-11-2016 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82714 182 265 5.1E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS21095 991d850be45003dc671855993432bad3 1046 Pfam PF00873 AcrB/AcrD/AcrF family 5 1014 2.8E-287 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS21095 991d850be45003dc671855993432bad3 1046 SUPERFAMILY SSF82866 795 1015 1.83E-40 T 11-11-2016 ATY42_RS22655 23d68034ade35175fdc37c5bb5dd8aad 393 SUPERFAMILY SSF53383 15 390 1.26E-53 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS22655 23d68034ade35175fdc37c5bb5dd8aad 393 Gene3D G3DSA:3.40.640.10 65 285 3.3E-39 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS22655 23d68034ade35175fdc37c5bb5dd8aad 393 Pfam PF00266 Aminotransferase class-V 68 361 1.4E-22 T 11-11-2016 IPR000192 Aminotransferase class V domain ATY42_RS11995 00b78ddd95976cc91d1beb35e867b491 143 Pfam PF01250 Ribosomal protein S6 4 92 4.5E-26 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11995 00b78ddd95976cc91d1beb35e867b491 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 3 94 9.7E-32 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS11995 00b78ddd95976cc91d1beb35e867b491 143 Gene3D G3DSA:3.30.70.60 2 104 1.7E-37 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ATY42_RS11995 00b78ddd95976cc91d1beb35e867b491 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 2 95 21.161 T 11-11-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ATY42_RS11995 00b78ddd95976cc91d1beb35e867b491 143 SUPERFAMILY SSF54995 1 104 1.83E-34 T 11-11-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00862 145 220 6.1E-26 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 3.4E-24 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SUPERFAMILY SSF52172 1 170 1.03E-39 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:1.10.10.10 124 221 3.7E-31 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Gene3D G3DSA:3.40.50.2300 1 123 4.0E-38 T 11-11-2016 ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 Pfam PF00072 Response regulator receiver domain 3 113 3.3E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS01930 ae52e0c9dbcb2eb6c03e20b9f1fb05a8 227 SMART SM00448 1 112 5.0E-41 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF50677 194 322 1.7E-50 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF50677 358 399 1.7E-50 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF46589 916 980 1.15E-15 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Pfam PF08264 Anticodon-binding domain of tRNA 704 856 1.5E-40 T 11-11-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF52374 398 603 2.6E-128 T 11-11-2016 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF52374 2 194 2.6E-128 T 11-11-2016 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF52374 641 673 2.6E-128 T 11-11-2016 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 916 980 1.3E-17 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:1.10.287.380 909 976 5.7E-10 T 11-11-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 980 15.411 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 SUPERFAMILY SSF47323 674 930 2.06E-62 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:3.40.50.620 7 195 1.4E-133 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:3.40.50.620 641 662 1.4E-133 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:3.40.50.620 398 603 1.4E-133 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 PRINTS PR00986 Valyl-tRNA synthetase signature 403 416 1.5E-26 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 PRINTS PR00986 Valyl-tRNA synthetase signature 538 556 1.5E-26 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 PRINTS PR00986 Valyl-tRNA synthetase signature 503 524 1.5E-26 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 1.5E-26 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:1.10.730.10 664 847 3.1E-56 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 962 0.0 T 11-11-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 663 1.5E-190 T 11-11-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:3.90.740.10 198 324 9.3E-42 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS04000 aabde2358b2ee6695d95b538d0eca644 980 Gene3D G3DSA:3.90.740.10 361 394 9.3E-42 T 11-11-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ATY42_RS13460 ace8d882624b50a82fc6a988eaf80ae1 291 Pfam PF00135 Carboxylesterase family 54 157 3.7E-13 T 11-11-2016 IPR002018 Carboxylesterase, type B ATY42_RS13460 ace8d882624b50a82fc6a988eaf80ae1 291 Gene3D G3DSA:3.40.50.1820 45 287 3.6E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13460 ace8d882624b50a82fc6a988eaf80ae1 291 SUPERFAMILY SSF53474 32 283 4.3E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13460 ace8d882624b50a82fc6a988eaf80ae1 291 Pfam PF01738 Dienelactone hydrolase family 210 261 1.6E-4 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 Pfam PF00593 TonB dependent receptor 638 896 7.2E-34 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 Gene3D G3DSA:2.170.130.10 64 176 1.8E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 Gene3D G3DSA:2.40.170.20 467 538 2.2E-73 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 Gene3D G3DSA:2.40.170.20 177 427 2.2E-73 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 Gene3D G3DSA:2.40.170.20 579 897 2.2E-73 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 42 897 5.7E-233 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 SUPERFAMILY SSF56935 280 420 5.19E-97 T 11-11-2016 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 SUPERFAMILY SSF56935 452 514 5.19E-97 T 11-11-2016 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 SUPERFAMILY SSF56935 31 239 5.19E-97 T 11-11-2016 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 SUPERFAMILY SSF56935 559 897 5.19E-97 T 11-11-2016 ATY42_RS08675 f356705d67ccd3048e16455f25c52d02 897 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 173 1.7E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 Pfam PF01464 Transglycosylase SLT domain 100 204 1.5E-22 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 Pfam PF01476 LysM domain 346 386 4.3E-10 T 11-11-2016 IPR018392 LysM domain ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 SUPERFAMILY SSF54106 344 387 5.62E-9 T 11-11-2016 IPR018392 LysM domain ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 Gene3D G3DSA:3.10.350.10 343 386 1.8E-13 T 11-11-2016 IPR018392 LysM domain ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 SMART SM00257 345 389 1.4E-8 T 11-11-2016 IPR018392 LysM domain ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 Gene3D G3DSA:1.10.530.10 91 242 4.9E-34 T 11-11-2016 ATY42_RS04985 2c72aade25c4b9d6e9f417579180fed5 392 SUPERFAMILY SSF53955 90 239 3.34E-32 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS01590 19b98eb78a17b3fa4c6e6ff345c674e1 143 Pfam PF00472 RF-1 domain 11 137 1.4E-23 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATY42_RS01590 19b98eb78a17b3fa4c6e6ff345c674e1 143 SUPERFAMILY SSF110916 11 101 2.48E-12 T 11-11-2016 ATY42_RS01590 19b98eb78a17b3fa4c6e6ff345c674e1 143 Gene3D G3DSA:3.30.160.200 6 110 5.8E-32 T 11-11-2016 ATY42_RS01590 19b98eb78a17b3fa4c6e6ff345c674e1 143 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 SUPERFAMILY SSF52172 686 805 2.49E-6 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 Gene3D G3DSA:3.40.50.2300 690 806 7.4E-6 T 11-11-2016 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 Gene3D G3DSA:3.30.565.10 513 668 1.8E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 614 1.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 629 647 1.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 653 666 1.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 628 1.4E-14 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 SMART SM00387 554 669 2.0E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 SUPERFAMILY SSF55874 504 667 3.41E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 SUPERFAMILY SSF47384 437 512 1.22E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS15195 b07a166a8db8dc6f8191678999859f3b 819 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 555 668 7.8E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS23015 83a4770e924c771a24421d3a9a227705 106 Pfam PF13546 DDE superfamily endonuclease 39 105 3.4E-16 T 11-11-2016 ATY42_RS01675 83a4770e924c771a24421d3a9a227705 106 Pfam PF13546 DDE superfamily endonuclease 39 105 3.4E-16 T 11-11-2016 ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 Pfam PF00270 DEAD/DEAH box helicase 25 198 6.8E-49 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 SMART SM00490 260 341 2.1E-31 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 Gene3D G3DSA:3.40.50.300 214 370 2.6E-50 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 SUPERFAMILY SSF52540 75 361 9.0E-74 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 SMART SM00487 20 224 1.7E-59 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 Pfam PF00271 Helicase conserved C-terminal domain 234 341 8.1E-28 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS03715 c6064861c57357e05d96aeef6a3ef3c5 460 Gene3D G3DSA:3.40.50.300 1 213 8.2E-82 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17780 d26185f19e88453706681ed519083aa3 246 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 12 245 5.5E-69 T 11-11-2016 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ATY42_RS17780 d26185f19e88453706681ed519083aa3 246 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 8 111 4.1E-19 T 11-11-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 ATY42_RS17780 d26185f19e88453706681ed519083aa3 246 SUPERFAMILY SSF63848 142 245 1.83E-29 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ATY42_RS17780 d26185f19e88453706681ed519083aa3 246 Gene3D G3DSA:2.160.20.70 129 245 2.5E-36 T 11-11-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 ATY42_RS17780 d26185f19e88453706681ed519083aa3 246 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 11 246 26.185 T 11-11-2016 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ATY42_RS17780 d26185f19e88453706681ed519083aa3 246 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 144 242 3.8E-30 T 11-11-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 811 970 2.0E-39 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 SMART SM00267 802 971 2.6E-47 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 SUPERFAMILY SSF55073 818 968 1.26E-42 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 SUPERFAMILY SSF63829 389 632 1.7E-10 T 11-11-2016 ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Gene3D G3DSA:3.30.70.270 814 969 1.4E-47 T 11-11-2016 ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 SUPERFAMILY SSF63829 54 244 9.81E-9 T 11-11-2016 ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Pfam PF07495 Y_Y_Y domain 687 744 4.6E-9 T 11-11-2016 IPR011123 Two component regulator three Y ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Pfam PF07494 Two component regulator propeller 52 74 0.011 T 11-11-2016 IPR011110 Two component regulator propeller ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Gene3D G3DSA:2.120.10.30 412 513 1.5E-7 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Pfam PF00990 Diguanylate cyclase, GGDEF domain 813 967 3.3E-38 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Gene3D G3DSA:2.120.10.30 203 220 1.5E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS12960 7c330f194807e58df31233d5c825a586 990 Gene3D G3DSA:2.120.10.30 54 122 1.5E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS11255 c7db0fb04e68f33f7e3796f6b21200f8 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS11200 c7db0fb04e68f33f7e3796f6b21200f8 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS03015 5f87c9bc84ef3b95b140aa6da1d9db3e 240 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS03015 5f87c9bc84ef3b95b140aa6da1d9db3e 240 Gene3D G3DSA:3.40.50.300 2 214 6.4E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03015 5f87c9bc84ef3b95b140aa6da1d9db3e 240 Pfam PF00005 ABC transporter 20 163 2.7E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS03015 5f87c9bc84ef3b95b140aa6da1d9db3e 240 SMART SM00382 29 211 1.6E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS03015 5f87c9bc84ef3b95b140aa6da1d9db3e 240 SUPERFAMILY SSF52540 3 213 3.72E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06725 da48c956c23a7a0c5d4c470b8cf4dda5 795 Gene3D G3DSA:2.170.130.10 51 174 1.2E-31 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06725 da48c956c23a7a0c5d4c470b8cf4dda5 795 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 44 - T 11-11-2016 IPR010916 TonB box, conserved site ATY42_RS06725 da48c956c23a7a0c5d4c470b8cf4dda5 795 SUPERFAMILY SSF56935 37 791 1.06E-108 T 11-11-2016 ATY42_RS06725 da48c956c23a7a0c5d4c470b8cf4dda5 795 Gene3D G3DSA:2.40.170.20 175 795 6.9E-95 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06725 da48c956c23a7a0c5d4c470b8cf4dda5 795 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 172 4.1E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06725 da48c956c23a7a0c5d4c470b8cf4dda5 795 Pfam PF00593 TonB dependent receptor 486 793 2.3E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 Gene3D G3DSA:3.40.50.2300 5 134 4.9E-41 T 11-11-2016 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 SMART SM00448 6 117 8.9E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 232 8.7E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 SUPERFAMILY SSF46894 131 233 1.13E-24 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 Pfam PF00072 Response regulator receiver domain 8 118 1.5E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 SMART SM00862 157 232 6.4E-22 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 SUPERFAMILY SSF52172 3 137 1.28E-40 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS19500 022720ea5b765ed54b5f9c557bbe9a96 239 Gene3D G3DSA:1.10.10.10 135 234 7.4E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 128 221 3.8E-26 T 11-11-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 SUPERFAMILY SSF55486 10 221 1.65E-57 T 11-11-2016 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 116 132 1.4E-19 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 79 99 1.4E-19 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 137 148 1.4E-19 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 206 221 1.4E-19 T 11-11-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 1 125 7.0E-40 T 11-11-2016 IPR013856 Peptidase M4 domain GO:0004222 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 Gene3D G3DSA:1.10.390.10 130 221 6.0E-27 T 11-11-2016 ATY42_RS20420 1595e713fba1fb54a960e42deb00c579 221 Gene3D G3DSA:3.10.170.10 1 128 6.7E-40 T 11-11-2016 IPR013856 Peptidase M4 domain GO:0004222 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 Gene3D G3DSA:1.10.10.10 5 83 1.1E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 5.9E-19 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 Gene3D G3DSA:3.40.190.10 164 264 5.5E-31 T 11-11-2016 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.9E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.9E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.9E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 SUPERFAMILY SSF46785 3 86 1.21E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 SUPERFAMILY SSF53850 95 296 2.17E-25 T 11-11-2016 ATY42_RS16350 632fc55822f213a20f41bc166dc82492 322 Pfam PF03466 LysR substrate binding domain 95 293 1.8E-21 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82714 184 273 3.53E-20 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82693 38 128 8.55E-25 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:3.30.2090.10 183 276 1.6E-24 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82693 565 668 5.75E-26 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.6E-98 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:3.30.2090.10 719 805 2.8E-16 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82866 297 497 9.29E-50 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Pfam PF00873 AcrB/AcrD/AcrF family 1 851 4.0E-265 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:1.10.3850.10 282 498 1.2E-58 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82693 275 331 1.01E-21 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82693 139 183 1.01E-21 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:3.30.70.1440 669 717 1.5E-23 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:3.30.70.1440 814 851 1.5E-23 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:3.30.70.1430 38 138 1.3E-30 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82714 719 804 1.14E-15 T 11-11-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82693 805 851 8.89E-27 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 SUPERFAMILY SSF82693 669 718 8.89E-27 T 11-11-2016 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 851 0.0 T 11-11-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 ATY42_RS15130 922f9c0e0ef027786b13c36838f0c5ba 862 Gene3D G3DSA:3.30.70.1430 567 668 2.3E-29 T 11-11-2016 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 Gene3D G3DSA:3.30.9.10 132 185 2.5E-14 T 11-11-2016 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 Gene3D G3DSA:3.30.9.10 258 356 2.5E-14 T 11-11-2016 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 SUPERFAMILY SSF54373 256 356 5.36E-14 T 11-11-2016 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 SUPERFAMILY SSF51905 54 260 6.73E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 SUPERFAMILY SSF51905 357 415 6.73E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 Gene3D G3DSA:3.50.50.60 186 257 1.2E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 Gene3D G3DSA:3.50.50.60 357 414 1.2E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 Gene3D G3DSA:3.50.50.60 47 130 1.2E-43 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15755 93fe5fd4531e96d22e3187aa6c8dd464 420 Pfam PF01266 FAD dependent oxidoreductase 55 395 1.5E-54 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 SUPERFAMILY SSF56935 309 522 1.95E-91 T 11-11-2016 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 SUPERFAMILY SSF56935 44 255 1.95E-91 T 11-11-2016 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 SUPERFAMILY SSF56935 577 768 1.95E-91 T 11-11-2016 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 SUPERFAMILY SSF56935 841 1003 1.95E-91 T 11-11-2016 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 176 2.5E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 50 1003 2.8E-198 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Gene3D G3DSA:2.170.130.10 70 183 6.1E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Gene3D G3DSA:2.40.170.20 826 1003 1.3E-62 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Gene3D G3DSA:2.40.170.20 184 427 1.3E-62 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Gene3D G3DSA:2.40.170.20 599 633 1.3E-62 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Gene3D G3DSA:2.40.170.20 668 767 1.3E-62 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Gene3D G3DSA:2.40.170.20 462 565 1.3E-62 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01790 c64eece7265febbd275074eb00da9ba4 1004 Pfam PF00593 TonB dependent receptor 675 1002 2.2E-31 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 346 1.6E-61 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 1.1E-252 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 70 7.4E-18 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 Gene3D G3DSA:3.40.50.300 74 347 1.8E-107 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 SUPERFAMILY SSF50615 1 71 6.54E-24 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 Gene3D G3DSA:2.40.10.170 1 71 1.6E-27 T 11-11-2016 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 SMART SM00382 140 331 0.0015 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 SUPERFAMILY SSF47917 349 464 2.51E-54 T 11-11-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 SUPERFAMILY SSF52540 75 352 2.25E-89 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.311 T 11-11-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201 ATY42_RS03530 805cc48e6f4459364155ada5831d68df 468 Gene3D G3DSA:1.10.1140.10 350 465 8.1E-56 T 11-11-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03295 db4c63c374d92ba5759a4522acaf21b4 377 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 64 2.0E-19 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain ATY42_RS03295 db4c63c374d92ba5759a4522acaf21b4 377 Gene3D G3DSA:3.30.1330.60 169 276 7.4E-17 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS03295 db4c63c374d92ba5759a4522acaf21b4 377 Pfam PF00691 OmpA family 173 256 5.7E-12 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS03295 db4c63c374d92ba5759a4522acaf21b4 377 SUPERFAMILY SSF103088 164 276 9.03E-20 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 Gene3D G3DSA:3.40.50.2020 270 439 1.9E-41 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 43.802 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 Gene3D G3DSA:3.60.20.10 2 256 5.8E-59 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 SUPERFAMILY SSF53271 248 473 1.48E-68 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 PIRSF PIRSF000485 1 476 5.4E-156 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 Pfam PF13522 Glutamine amidotransferase domain 61 193 2.4E-15 T 11-11-2016 ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 462 8.1E-161 T 11-11-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ATY42_RS18515 634de06916c57bc357777c8f6594bea9 488 SUPERFAMILY SSF56235 2 255 2.32E-65 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 49 1052 3.5E-268 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.170.130.10 69 190 8.9E-19 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Pfam PF07715 TonB-dependent Receptor Plug Domain 68 186 1.4E-14 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.40.170.20 502 536 2.1E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.40.170.20 191 268 2.1E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.40.170.20 383 445 2.1E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.40.170.20 599 810 2.1E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.40.170.20 883 1052 2.1E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Gene3D G3DSA:2.40.170.20 302 346 2.1E-56 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 Pfam PF00593 TonB dependent receptor 693 1050 8.4E-32 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 SUPERFAMILY SSF56935 36 256 1.45E-84 T 11-11-2016 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 SUPERFAMILY SSF56935 303 439 1.45E-84 T 11-11-2016 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 SUPERFAMILY SSF56935 596 792 1.45E-84 T 11-11-2016 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 SUPERFAMILY SSF56935 889 1052 1.45E-84 T 11-11-2016 ATY42_RS06175 ec29012311c94f5f11f9e8bbc41e824e 1052 SUPERFAMILY SSF56935 482 541 1.45E-84 T 11-11-2016 ATY42_RS07345 e59ccee80893e9af4985a58e47da5a7d 387 Pfam PF05598 Transposase domain (DUF772) 57 131 3.2E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07345 e59ccee80893e9af4985a58e47da5a7d 387 Pfam PF01609 Transposase DDE domain 143 318 4.2E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 Pfam PF13412 Winged helix-turn-helix DNA-binding 5 49 1.1E-14 T 11-11-2016 ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 SUPERFAMILY SSF46785 5 56 2.73E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.6E-14 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.6E-14 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.6E-14 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 Pfam PF01037 Lrp/AsnC ligand binding domain 69 139 7.7E-15 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 Gene3D G3DSA:1.10.10.10 2 79 9.4E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 Gene3D G3DSA:3.30.70.920 80 139 7.1E-17 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 SUPERFAMILY SSF54909 65 142 1.61E-15 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS12320 95462bc20918d84ec67545d049ac1616 143 SMART SM00344 7 109 9.0E-21 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 SUPERFAMILY SSF49452 31 105 1.02E-7 T 11-11-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 SUPERFAMILY SSF56935 930 1010 1.28E-58 T 11-11-2016 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 SUPERFAMILY SSF56935 625 665 1.28E-58 T 11-11-2016 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 SUPERFAMILY SSF56935 111 586 1.28E-58 T 11-11-2016 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 SUPERFAMILY SSF56935 727 902 1.28E-58 T 11-11-2016 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.170.130.10 112 248 6.8E-4 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.60.40.10 48 90 4.1E-4 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.40.170.20 628 669 1.1E-45 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.40.170.20 545 576 1.1E-45 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.40.170.20 466 513 1.1E-45 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.40.170.20 718 1010 1.1E-45 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01100 8619593e2903295f8384edd130fa55a3 1010 Gene3D G3DSA:2.40.170.20 249 434 1.1E-45 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 11 418 2.0E-130 T 11-11-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 SUPERFAMILY SSF102645 211 423 2.62E-72 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 Pfam PF02441 Flavoprotein 14 141 1.4E-32 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 Gene3D G3DSA:3.40.50.10300 210 423 9.9E-81 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 SUPERFAMILY SSF52507 10 184 5.23E-58 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 Gene3D G3DSA:3.40.50.1950 9 186 5.2E-62 T 11-11-2016 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ATY42_RS02340 f6c7b508635250fdfa2e04583f152813 424 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 213 392 6.4E-68 T 11-11-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ATY42_RS21935 4c5528a742a2a4d1eef3a6c4470e88fb 186 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 1 148 5.0E-45 T 11-11-2016 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 ATY42_RS21935 4c5528a742a2a4d1eef3a6c4470e88fb 186 SUPERFAMILY SSF158694 2 148 1.7E-38 T 11-11-2016 ATY42_RS21935 4c5528a742a2a4d1eef3a6c4470e88fb 186 Pfam PF09349 OHCU decarboxylase 4 146 2.6E-30 T 11-11-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 ATY42_RS21935 4c5528a742a2a4d1eef3a6c4470e88fb 186 Gene3D G3DSA:1.10.3330.10 2 148 9.7E-43 T 11-11-2016 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394 ATY42_RS19595 8edb5c5884fc099b80f94a6e7f4ca684 329 Pfam PF05598 Transposase domain (DUF772) 52 126 2.4E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS19595 8edb5c5884fc099b80f94a6e7f4ca684 329 Pfam PF01609 Transposase DDE domain 138 313 2.4E-31 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS02515 a356c32e1f4fb829bc0a917d2cf3f611 296 ProSitePatterns PS00893 Nudix box signature. 193 214 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS02515 a356c32e1f4fb829bc0a917d2cf3f611 296 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 49 125 1.2E-4 T 11-11-2016 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 ATY42_RS02515 a356c32e1f4fb829bc0a917d2cf3f611 296 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 128 158 5.4E-8 T 11-11-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 ATY42_RS02515 a356c32e1f4fb829bc0a917d2cf3f611 296 Gene3D G3DSA:3.90.79.10 117 293 4.4E-45 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS02515 a356c32e1f4fb829bc0a917d2cf3f611 296 SUPERFAMILY SSF55811 112 292 2.98E-41 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS02515 a356c32e1f4fb829bc0a917d2cf3f611 296 Pfam PF00293 NUDIX domain 164 269 1.3E-15 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS20905 416b6511fa844905238620d8ca02e811 205 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.59 T 11-11-2016 IPR022927 RNA pyrophosphohydrolase RppH ATY42_RS20905 416b6511fa844905238620d8ca02e811 205 Gene3D G3DSA:3.90.79.10 4 149 7.0E-30 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS20905 416b6511fa844905238620d8ca02e811 205 SUPERFAMILY SSF55811 7 151 5.96E-30 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS20905 416b6511fa844905238620d8ca02e811 205 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS20905 416b6511fa844905238620d8ca02e811 205 Pfam PF00293 NUDIX domain 7 129 2.1E-24 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS07525 c4d23caadbf848d3c5c0b1502ef6a8d6 611 Gene3D G3DSA:2.40.170.20 116 609 9.4E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS07525 c4d23caadbf848d3c5c0b1502ef6a8d6 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 6 99 2.2E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS07525 c4d23caadbf848d3c5c0b1502ef6a8d6 611 SUPERFAMILY SSF56935 2 611 1.58E-85 T 11-11-2016 ATY42_RS07525 c4d23caadbf848d3c5c0b1502ef6a8d6 611 Pfam PF00593 TonB dependent receptor 359 608 3.0E-25 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS07525 c4d23caadbf848d3c5c0b1502ef6a8d6 611 Gene3D G3DSA:2.170.130.10 3 104 7.1E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 Pfam PF13378 Enolase C-terminal domain-like 144 354 2.4E-52 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 Gene3D G3DSA:3.20.20.120 123 353 1.6E-79 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 SMART SM00922 141 239 1.4E-24 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 11 124 3.7E-19 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 Gene3D G3DSA:3.30.390.10 1 122 1.5E-46 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 SUPERFAMILY SSF51604 112 355 1.05E-67 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS20640 db233edd81bf7433e460051ec2a65b95 365 SUPERFAMILY SSF54826 1 125 3.68E-31 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 Gene3D G3DSA:2.170.130.10 40 158 3.9E-32 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 Gene3D G3DSA:2.40.170.20 166 708 2.7E-107 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 61 152 2.0E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 SUPERFAMILY SSF56935 22 708 8.43E-112 T 11-11-2016 ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 708 1.6E-84 T 11-11-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 691 708 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site ATY42_RS09690 0da25858a7614989ce1ad202c2069a76 708 Pfam PF00593 TonB dependent receptor 469 707 5.0E-26 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS16840 274c18fdb6db96e52f5ff4d777b3150c 166 SUPERFAMILY SSF53098 98 155 4.3E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16840 274c18fdb6db96e52f5ff4d777b3150c 166 Gene3D G3DSA:3.30.420.10 99 154 6.4E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16840 274c18fdb6db96e52f5ff4d777b3150c 166 Pfam PF13276 HTH-like domain 36 89 7.0E-10 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS02045 356a20ba2bcbcd257fece4eac067da85 132 Pfam PF00892 EamA-like transporter family 16 115 6.1E-7 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS01370 796397dc62ef33ed4d33f3029ef9b80b 259 Pfam PF05598 Transposase domain (DUF772) 87 160 4.4E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 10 904 17.266 T 11-11-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 561 573 - T 11-11-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 Pfam PF00311 Phosphoenolpyruvate carboxylase 142 904 1.2E-221 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 SUPERFAMILY SSF51621 18 904 9.89E-258 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 404 424 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 601 630 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 199 215 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 257 272 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 146 159 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 559 579 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 735 761 7.8E-51 T 11-11-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 147 158 - T 11-11-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 ATY42_RS19100 d18640535e1eda98ae5f8eb8b8b02d9a 904 Gene3D G3DSA:1.20.1440.90 287 407 8.3E-11 T 11-11-2016 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 Gene3D G3DSA:3.40.50.620 7 161 9.7E-53 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 SUPERFAMILY SSF52374 7 160 6.7E-45 T 11-11-2016 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 8 160 7.5E-58 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 64 3.2E-16 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 Pfam PF01467 Cytidylyltransferase-like 10 138 6.4E-22 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 4.1E-48 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 4.1E-48 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 4.1E-48 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 4.1E-48 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 4.1E-48 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS12420 9666500eebc10094f2e081ee76b7f88d 168 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.964 T 11-11-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3 ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 Pfam PF12161 HsdM N-terminal domain 8 123 1.5E-26 T 11-11-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 Pfam PF02384 N-6 DNA Methylase 146 471 5.9E-109 T 11-11-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 Gene3D G3DSA:3.40.50.150 147 357 1.8E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 SUPERFAMILY SSF53335 6 508 9.95E-138 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 266 278 1.5E-19 T 11-11-2016 ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 169 185 1.5E-19 T 11-11-2016 ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 206 1.5E-19 T 11-11-2016 ATY42_RS17375 9ec249738e78b519dca19d7b21056658 509 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 300 324 1.5E-19 T 11-11-2016 ATY42_RS12060 e93e6e9dd628ee2d8fdfc5b16fd69be0 481 PIRSF PIRSF000977 1 481 7.9E-175 T 11-11-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 ATY42_RS12060 e93e6e9dd628ee2d8fdfc5b16fd69be0 481 SMART SM00479 4 197 2.1E-4 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS12060 e93e6e9dd628ee2d8fdfc5b16fd69be0 481 Gene3D G3DSA:3.30.420.10 3 195 1.1E-72 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12060 e93e6e9dd628ee2d8fdfc5b16fd69be0 481 Pfam PF08411 Exonuclease C-terminal 206 474 5.3E-92 T 11-11-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 ATY42_RS12060 e93e6e9dd628ee2d8fdfc5b16fd69be0 481 Pfam PF00929 Exonuclease 7 185 2.0E-22 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS12060 e93e6e9dd628ee2d8fdfc5b16fd69be0 481 SUPERFAMILY SSF53098 2 477 2.85E-114 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15980 da5cad4de60e5180964a2c88a999c7d3 118 SUPERFAMILY SSF46955 17 113 1.56E-17 T 11-11-2016 IPR009061 Putative DNA-binding domain ATY42_RS15980 da5cad4de60e5180964a2c88a999c7d3 118 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.2E-21 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS15980 da5cad4de60e5180964a2c88a999c7d3 118 Gene3D G3DSA:1.10.1660.10 16 83 7.1E-16 T 11-11-2016 ATY42_RS15980 da5cad4de60e5180964a2c88a999c7d3 118 SMART SM00422 19 89 2.2E-5 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 SUPERFAMILY SSF56988 463 638 2.75E-49 T 11-11-2016 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Pfam PF07691 PA14 domain 464 608 4.5E-30 T 11-11-2016 IPR011658 PA14 domain ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 SUPERFAMILY SSF52279 370 438 6.93E-54 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 SUPERFAMILY SSF52279 610 764 6.93E-54 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 PRINTS PR00133 Glycosyl hydrolase family 3 signature 252 270 6.7E-8 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 PRINTS PR00133 Glycosyl hydrolase family 3 signature 77 96 6.7E-8 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 SMART SM01217 798 869 6.8E-27 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Gene3D G3DSA:3.40.50.1700 610 764 1.2E-75 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Gene3D G3DSA:3.40.50.1700 356 439 1.2E-75 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 SUPERFAMILY SSF51445 14 369 2.63E-95 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 38 328 5.8E-50 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 SMART SM00758 462 611 4.4E-30 T 11-11-2016 IPR011658 PA14 domain ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Gene3D G3DSA:3.20.20.300 14 340 1.1E-109 T 11-11-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 370 761 4.9E-60 T 11-11-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ATY42_RS22225 c343beb635252b1745babaa6bcc2d600 883 Pfam PF14310 Fibronectin type III-like domain 798 869 2.4E-19 T 11-11-2016 IPR026891 Fibronectin type III-like domain ATY42_RS02815 e4e670846e44889e79012ff4c5c85091 573 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 63 224 2.6E-17 T 11-11-2016 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 16 446 1.4E-171 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 Pfam PF04055 Radical SAM superfamily 152 329 2.6E-28 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 SMART SM00729 146 371 5.0E-50 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 Gene3D G3DSA:2.40.50.140 386 449 7.5E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 Pfam PF00919 Uncharacterized protein family UPF0004 16 108 5.2E-20 T 11-11-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 SUPERFAMILY SSF102114 125 377 1.02E-50 T 11-11-2016 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 16 446 1.3E-97 T 11-11-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 Gene3D G3DSA:3.80.30.20 144 382 1.8E-70 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 11-11-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 ATY42_RS16445 e33a139ea54d23548d3c54686d1c0a9c 466 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 15 448 60.134 T 11-11-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 ATY42_RS08470 8a57ff84fdda5a0ca4d2de14a098f58e 176 Pfam PF01584 CheW-like domain 35 153 3.5E-25 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08470 8a57ff84fdda5a0ca4d2de14a098f58e 176 Gene3D G3DSA:2.40.50.180 72 115 2.6E-4 T 11-11-2016 ATY42_RS08470 8a57ff84fdda5a0ca4d2de14a098f58e 176 SUPERFAMILY SSF50341 28 169 1.16E-25 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08470 8a57ff84fdda5a0ca4d2de14a098f58e 176 SMART SM00260 29 166 2.9E-7 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS00345 c4cd07072bd75ca836867f04855d5faa 527 Pfam PF08323 Starch synthase catalytic domain 53 284 2.7E-62 T 11-11-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ATY42_RS00345 c4cd07072bd75ca836867f04855d5faa 527 Hamap MF_00484 Glycogen synthase [glgA]. 51 516 38.202 T 11-11-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ATY42_RS00345 c4cd07072bd75ca836867f04855d5faa 527 Gene3D G3DSA:3.40.50.2000 301 496 1.1E-64 T 11-11-2016 ATY42_RS00345 c4cd07072bd75ca836867f04855d5faa 527 SUPERFAMILY SSF53756 40 521 4.54E-100 T 11-11-2016 ATY42_RS00345 c4cd07072bd75ca836867f04855d5faa 527 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 53 515 1.7E-139 T 11-11-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ATY42_RS00345 c4cd07072bd75ca836867f04855d5faa 527 Pfam PF00534 Glycosyl transferases group 1 338 476 2.7E-13 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS20625 33bccbd2650c7ce0949fa6834e982cca 248 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 49 246 28.701 T 11-11-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 ATY42_RS20625 33bccbd2650c7ce0949fa6834e982cca 248 SUPERFAMILY SSF55166 48 244 2.43E-55 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 ATY42_RS20625 33bccbd2650c7ce0949fa6834e982cca 248 Gene3D G3DSA:3.30.1380.10 47 247 3.2E-64 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 ATY42_RS20625 33bccbd2650c7ce0949fa6834e982cca 248 Pfam PF01427 D-ala-D-ala dipeptidase 47 236 6.7E-35 T 11-11-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 ATY42_RS20625 33bccbd2650c7ce0949fa6834e982cca 248 PIRSF PIRSF026671 19 248 2.3E-67 T 11-11-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 ATY42_RS17765 992023669a1a223955f66046d7875160 213 SUPERFAMILY SSF46894 145 212 3.74E-22 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 SMART SM00421 150 207 1.0E-25 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 SMART SM00448 2 115 3.6E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS17765 992023669a1a223955f66046d7875160 213 SUPERFAMILY SSF52172 1 133 2.99E-35 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS17765 992023669a1a223955f66046d7875160 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 2.1E-15 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 2.1E-15 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 2.1E-15 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 Gene3D G3DSA:3.40.50.2300 1 156 2.9E-41 T 11-11-2016 ATY42_RS17765 992023669a1a223955f66046d7875160 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 206 1.6E-20 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17765 992023669a1a223955f66046d7875160 213 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS17765 992023669a1a223955f66046d7875160 213 Gene3D G3DSA:1.10.10.10 157 212 6.4E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02420 289e07772a1dd6a38b3d29bf557c1c66 472 Gene3D G3DSA:2.70.70.10 280 424 6.9E-49 T 11-11-2016 ATY42_RS02420 289e07772a1dd6a38b3d29bf557c1c66 472 Pfam PF01551 Peptidase family M23 325 421 5.5E-34 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS02420 289e07772a1dd6a38b3d29bf557c1c66 472 SUPERFAMILY SSF51261 177 423 2.41E-72 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS02420 289e07772a1dd6a38b3d29bf557c1c66 472 Pfam PF04225 Opacity-associated protein A LysM-like domain 101 168 4.6E-6 T 11-11-2016 IPR007340 Opacity-associated protein A ATY42_RS19475 e16bf1f1c06a279607bec3ad3ac9639e 276 Pfam PF00756 Putative esterase 21 268 2.0E-66 T 11-11-2016 IPR000801 Putative esterase Reactome: R-HSA-156590 ATY42_RS19475 e16bf1f1c06a279607bec3ad3ac9639e 276 Gene3D G3DSA:3.40.50.1820 2 275 4.3E-82 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19475 e16bf1f1c06a279607bec3ad3ac9639e 276 SUPERFAMILY SSF53474 1 274 3.63E-90 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19475 e16bf1f1c06a279607bec3ad3ac9639e 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 1.3E-128 T 11-11-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 Gene3D G3DSA:2.40.50.230 377 464 1.8E-29 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 699 855 4.2E-32 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 78 469 9.2E-52 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 SUPERFAMILY SSF69279 342 359 1.29E-9 T 11-11-2016 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 SUPERFAMILY SSF69279 179 305 1.29E-9 T 11-11-2016 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 Pfam PF05954 Phage late control gene D protein (GPD) 78 304 1.7E-44 T 11-11-2016 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 Gene3D G3DSA:3.55.50.10 78 157 3.2E-18 T 11-11-2016 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 SUPERFAMILY SSF69255 370 464 1.44E-24 T 11-11-2016 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 534 638 1.5E-33 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 SUPERFAMILY SSF69279 78 151 1.96E-14 T 11-11-2016 ATY42_RS17565 fe0846e830a758a3694c7920f25758cf 889 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 78 468 5.5E-63 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS15035 862b5dff2d3c798ac85a22f332a81102 68 Pfam PF04995 Heme exporter protein D (CcmD) 8 51 3.6E-14 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 ATY42_RS15035 862b5dff2d3c798ac85a22f332a81102 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 5 51 1.7E-18 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 SUPERFAMILY SSF88713 216 262 7.79E-35 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 SUPERFAMILY SSF88713 59 188 7.79E-35 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 311 462 4.0E-68 T 11-11-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 474 604 4.0E-46 T 11-11-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 Gene3D G3DSA:3.20.20.370 413 458 8.9E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 Gene3D G3DSA:3.20.20.370 68 262 8.9E-27 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 39 624 1.2E-246 T 11-11-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 ATY42_RS19705 e91ea5cae665a79903b5046cedbac23e 632 Pfam PF01522 Polysaccharide deacetylase 95 260 5.1E-26 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 Gene3D G3DSA:3.40.50.1360 2 134 4.2E-58 T 11-11-2016 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 209 1.3E-67 T 11-11-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 215 33.733 T 11-11-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 47 210 1.2E-57 T 11-11-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 SUPERFAMILY SSF100950 2 144 2.76E-47 T 11-11-2016 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 Gene3D G3DSA:3.30.70.260 135 195 3.1E-28 T 11-11-2016 ATY42_RS05480 202cd341944904a33b7bd9c92845c8c1 215 SUPERFAMILY SSF75445 125 197 7.85E-23 T 11-11-2016 ATY42_RS19010 1deeab8e502b067e424b1cfcceb069ba 79 Pfam PF10636 Hemin uptake protein hemP 44 79 5.8E-18 T 11-11-2016 IPR019600 Hemin uptake protein HemP ATY42_RS19010 1deeab8e502b067e424b1cfcceb069ba 79 Gene3D G3DSA:2.10.70.10 39 79 9.7E-20 T 11-11-2016 ATY42_RS15310 35dea870a621075c3f2675bd2a84804a 277 SUPERFAMILY SSF144059 10 269 7.06E-78 T 11-11-2016 ATY42_RS15310 35dea870a621075c3f2675bd2a84804a 277 Gene3D G3DSA:1.25.40.10 13 84 4.9E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS15310 35dea870a621075c3f2675bd2a84804a 277 PIRSF PIRSF029288 1 271 1.8E-98 T 11-11-2016 IPR009211 Predicted virulence protein, SciE type ATY42_RS15310 35dea870a621075c3f2675bd2a84804a 277 Pfam PF07024 ImpE protein 145 264 5.1E-37 T 11-11-2016 IPR009211 Predicted virulence protein, SciE type ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 SUPERFAMILY SSF50129 14 162 1.01E-27 T 11-11-2016 IPR011032 GroES-like ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 SMART SM00829 10 235 2.4E-7 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 Gene3D G3DSA:3.90.180.10 12 159 8.4E-31 T 11-11-2016 IPR011032 GroES-like ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 Gene3D G3DSA:3.40.50.720 160 210 3.4E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 87 2.6E-7 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 SUPERFAMILY SSF51735 130 224 9.63E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07090 f07358e3088b99ce310826b4a02b92c3 237 Pfam PF00107 Zinc-binding dehydrogenase 167 211 2.4E-10 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 PIRSF PIRSF000190 2 199 5.2E-63 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 105 3.7E-27 T 11-11-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 158 199 1.6E-14 T 11-11-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 4 199 34.71 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 168 181 - T 11-11-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 197 2.8E-61 T 11-11-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 Gene3D G3DSA:2.30.110.10 3 199 7.6E-70 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS06110 a5a3542eecf01c6bacdcfc17349f29c6 199 SUPERFAMILY SSF50475 2 199 3.14E-55 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 464 45.014 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 SUPERFAMILY SSF50249 16 100 9.21E-17 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 SUPERFAMILY SSF55681 103 462 7.47E-93 T 11-11-2016 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 457 1.4E-80 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 Gene3D G3DSA:2.40.50.140 16 102 1.7E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 16 464 1.1E-189 T 11-11-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 Pfam PF01336 OB-fold nucleic acid binding domain 20 97 2.1E-10 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 218 9.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 379 395 9.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 222 235 9.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 PRINTS PR01042 Aspartyl-tRNA synthetase signature 419 433 9.2E-14 T 11-11-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS12005 0d943fa2d4160e26929f1ba915276d52 464 Gene3D G3DSA:3.30.930.10 107 460 1.0E-108 T 11-11-2016 ATY42_RS05880 339ad25aa60d972360abdc7c2f4ca271 338 Pfam PF12760 Transposase zinc-ribbon domain 40 86 1.5E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS05880 339ad25aa60d972360abdc7c2f4ca271 338 SMART SM01126 154 299 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS05880 339ad25aa60d972360abdc7c2f4ca271 338 Pfam PF12762 ISXO2-like transposase domain 154 299 3.4E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS14695 32a23da6717f8049ec39351fa4d9a17f 162 Pfam PF02631 RecX family 41 156 5.2E-26 T 11-11-2016 IPR003783 Regulatory protein RecX GO:0006282 ATY42_RS14695 32a23da6717f8049ec39351fa4d9a17f 162 Gene3D G3DSA:1.10.10.10 65 107 7.8E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14695 32a23da6717f8049ec39351fa4d9a17f 162 Gene3D G3DSA:1.10.10.10 111 161 1.1E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14695 32a23da6717f8049ec39351fa4d9a17f 162 Hamap MF_01114 Regulatory protein RecX [recX]. 11 162 13.911 T 11-11-2016 IPR003783 Regulatory protein RecX GO:0006282 ATY42_RS14695 32a23da6717f8049ec39351fa4d9a17f 162 Gene3D G3DSA:1.10.10.10 18 64 5.4E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01565 47e23d4989a523e0e17783bf92e6d3db 85 Gene3D G3DSA:3.30.70.1290 2 84 1.1E-26 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS01565 47e23d4989a523e0e17783bf92e6d3db 85 SMART SM01321 11 84 9.0E-5 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS01565 47e23d4989a523e0e17783bf92e6d3db 85 SUPERFAMILY SSF143422 1 84 5.89E-27 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS01565 47e23d4989a523e0e17783bf92e6d3db 85 Pfam PF01797 Transposase IS200 like 11 84 1.6E-20 T 11-11-2016 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00425 3f4aafeadb7d39b0dcaddd458cb9121f 276 TIGRFAM TIGR01401 fliR_like_III: type III secretion apparatus protein SpaR/YscT/HrcT 13 264 1.9E-81 T 11-11-2016 IPR006304 Type III secretion protein SpaR/YscT GO:0006810|GO:0016021 ATY42_RS00425 3f4aafeadb7d39b0dcaddd458cb9121f 276 Pfam PF01311 Bacterial export proteins, family 1 20 252 1.5E-48 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS00425 3f4aafeadb7d39b0dcaddd458cb9121f 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 87 106 1.4E-25 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS00425 3f4aafeadb7d39b0dcaddd458cb9121f 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 28 49 1.4E-25 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS00425 3f4aafeadb7d39b0dcaddd458cb9121f 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 211 230 1.4E-25 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS00425 3f4aafeadb7d39b0dcaddd458cb9121f 276 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 189 211 1.4E-25 T 11-11-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 SMART SM00387 228 341 4.0E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 Gene3D G3DSA:3.30.565.10 191 338 5.6E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 SUPERFAMILY SSF47384 119 182 3.73E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 228 339 3.8E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 Gene3D G3DSA:3.30.450.20 10 96 3.5E-8 T 11-11-2016 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 SUPERFAMILY SSF55785 10 69 3.14E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 SUPERFAMILY SSF55874 192 338 1.07E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 Gene3D G3DSA:1.10.287.130 123 181 7.7E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 2.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 2.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 2.1E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 182 3.7E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS22535 06fbe685f7138364bc5dda438a0d29bd 351 SMART SM00388 122 189 3.7E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 Gene3D G3DSA:3.30.420.40 9 164 2.6E-46 T 11-11-2016 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 5.2E-161 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 Gene3D G3DSA:3.30.420.40 268 322 1.0E-34 T 11-11-2016 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 Gene3D G3DSA:3.30.420.40 165 191 1.0E-34 T 11-11-2016 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 SUPERFAMILY SSF53067 9 153 5.12E-38 T 11-11-2016 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 Gene3D G3DSA:3.90.640.10 192 264 2.2E-30 T 11-11-2016 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 SUPERFAMILY SSF53067 155 340 2.5E-48 T 11-11-2016 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 SMART SM00268 10 345 0.0034 T 11-11-2016 IPR004000 Actin family ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 Pfam PF06723 MreB/Mbl protein 11 339 3.3E-151 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 5.6E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 5.6E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 5.6E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 5.6E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS19965 78b904b3822f6099845cb85389d923ec 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 5.6E-62 T 11-11-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 ATY42_RS00090 0361eb5e47b1de88a6bfc4d42649cb6e 712 Pfam PF00593 TonB dependent receptor 451 708 5.0E-27 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS00090 0361eb5e47b1de88a6bfc4d42649cb6e 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 162 9.8E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS00090 0361eb5e47b1de88a6bfc4d42649cb6e 712 Gene3D G3DSA:2.40.170.20 163 710 2.1E-83 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS00090 0361eb5e47b1de88a6bfc4d42649cb6e 712 Gene3D G3DSA:2.170.130.10 34 162 1.2E-22 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS00090 0361eb5e47b1de88a6bfc4d42649cb6e 712 SUPERFAMILY SSF56935 35 710 3.14E-99 T 11-11-2016 ATY42_RS07075 35badf27c9c37374faf4310e39b11eb2 332 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 ATY42_RS07075 35badf27c9c37374faf4310e39b11eb2 332 Gene3D G3DSA:1.10.600.10 16 331 3.2E-101 T 11-11-2016 IPR008949 Isoprenoid synthase domain ATY42_RS07075 35badf27c9c37374faf4310e39b11eb2 332 SUPERFAMILY SSF48576 15 331 2.16E-98 T 11-11-2016 IPR008949 Isoprenoid synthase domain ATY42_RS07075 35badf27c9c37374faf4310e39b11eb2 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 105 - T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 ATY42_RS07075 35badf27c9c37374faf4310e39b11eb2 332 Pfam PF00348 Polyprenyl synthetase 41 275 4.0E-75 T 11-11-2016 IPR000092 Polyprenyl synthetase GO:0008299 ATY42_RS01600 8b89dacc192893f92b09ae69f1f67b3c 250 SUPERFAMILY SSF55120 14 247 1.46E-55 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS01600 8b89dacc192893f92b09ae69f1f67b3c 250 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 68 82 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS01600 8b89dacc192893f92b09ae69f1f67b3c 250 Pfam PF00849 RNA pseudouridylate synthase 29 180 1.6E-27 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS08245 30a6168fc3a5330c866258d2419445cc 272 Pfam PF13525 Outer membrane lipoprotein 144 266 1.1E-13 T 11-11-2016 ATY42_RS08245 30a6168fc3a5330c866258d2419445cc 272 Gene3D G3DSA:1.25.40.10 148 255 1.1E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08245 30a6168fc3a5330c866258d2419445cc 272 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 262 6.8E-40 T 11-11-2016 IPR014162 Tol-Pal system, YbgF ATY42_RS08245 30a6168fc3a5330c866258d2419445cc 272 Pfam PF16331 TolA binding protein trimerisation 26 99 1.5E-18 T 11-11-2016 IPR032519 YbgF, trimerisation domain GO:0070206 ATY42_RS08245 30a6168fc3a5330c866258d2419445cc 272 SUPERFAMILY SSF48452 144 259 3.13E-14 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 PIRSF PIRSF000144 1 768 0.0 T 11-11-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 Pfam PF01568 Molydopterin dinucleotide binding domain 650 757 6.7E-11 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 SUPERFAMILY SSF53706 48 632 1.44E-142 T 11-11-2016 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 13 762 7.9E-284 T 11-11-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 Gene3D G3DSA:2.40.40.20 645 762 2.4E-9 T 11-11-2016 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 Gene3D G3DSA:3.40.228.10 183 394 7.4E-52 T 11-11-2016 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 SUPERFAMILY SSF50692 645 765 1.6E-17 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 Pfam PF00384 Molybdopterin oxidoreductase 109 494 3.6E-25 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 Gene3D G3DSA:3.40.50.740 395 626 3.0E-51 T 11-11-2016 ATY42_RS13830 212ca8f07ac7d37dee4ab5999111412e 782 Gene3D G3DSA:3.40.50.740 109 182 3.0E-51 T 11-11-2016 ATY42_RS09290 e3b0f5f2b7beb650a83e7f6b6f3d5476 854 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 22 303 7.1E-9 T 11-11-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD ATY42_RS09290 e3b0f5f2b7beb650a83e7f6b6f3d5476 854 SUPERFAMILY SSF55729 648 826 6.42E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS09290 e3b0f5f2b7beb650a83e7f6b6f3d5476 854 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 542 828 9.1E-94 T 11-11-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal ATY42_RS12950 f7aa6a322436b7197f4bfbc9afd13cf4 89 PIRSF PIRSF004669 1 89 4.5E-23 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS12950 f7aa6a322436b7197f4bfbc9afd13cf4 89 Pfam PF01313 Bacterial export proteins, family 3 10 77 4.8E-20 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS12950 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 8.0E-15 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS12950 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 8.0E-15 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS12950 f7aa6a322436b7197f4bfbc9afd13cf4 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 8.0E-15 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS06930 89fafbf55f9aa2abde00e5678351d5bb 213 Pfam PF01551 Peptidase family M23 102 196 7.7E-18 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS06930 89fafbf55f9aa2abde00e5678351d5bb 213 SUPERFAMILY SSF51261 77 204 1.41E-26 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS06930 89fafbf55f9aa2abde00e5678351d5bb 213 Gene3D G3DSA:2.70.70.10 70 205 1.8E-30 T 11-11-2016 ATY42_RS05075 ae86a4e206408dc5f3b964d317850357 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS05075 ae86a4e206408dc5f3b964d317850357 338 SMART SM01126 154 299 9.4E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS05075 ae86a4e206408dc5f3b964d317850357 338 Pfam PF12762 ISXO2-like transposase domain 154 299 2.7E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20560 85a9c4d238de2615bf1ef345918ce959 325 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 13 323 6.7E-20 T 11-11-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX ATY42_RS02400 af852f3c37f91f1d9ad117f51d58f59a 266 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 262 1.5E-63 T 11-11-2016 ATY42_RS02400 af852f3c37f91f1d9ad117f51d58f59a 266 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 264 5.8E-70 T 11-11-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ATY42_RS02400 af852f3c37f91f1d9ad117f51d58f59a 266 SUPERFAMILY SSF56219 1 264 1.96E-74 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS02400 af852f3c37f91f1d9ad117f51d58f59a 266 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 11-11-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 ATY42_RS02400 af852f3c37f91f1d9ad117f51d58f59a 266 Gene3D G3DSA:3.60.10.10 1 264 2.9E-88 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS02400 af852f3c37f91f1d9ad117f51d58f59a 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 257 2.5E-25 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS16235 79f27d1def47eaaefec9bf21b4d4e8ea 175 SUPERFAMILY SSF52833 20 174 1.57E-46 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16235 79f27d1def47eaaefec9bf21b4d4e8ea 175 PIRSF PIRSF000216 4 175 5.0E-52 T 11-11-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16235 79f27d1def47eaaefec9bf21b4d4e8ea 175 Gene3D G3DSA:3.40.30.10 94 172 2.1E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16235 79f27d1def47eaaefec9bf21b4d4e8ea 175 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 26 174 3.8E-59 T 11-11-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16235 79f27d1def47eaaefec9bf21b4d4e8ea 175 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 27 174 4.1E-46 T 11-11-2016 ATY42_RS21345 2a1ce6c1f57e860d25f1f8bfd3787a74 181 Pfam PF07745 Glycosyl hydrolase family 53 1 163 4.8E-66 T 11-11-2016 IPR011683 Glycosyl hydrolase family 53 GO:0015926 ATY42_RS21345 2a1ce6c1f57e860d25f1f8bfd3787a74 181 Gene3D G3DSA:3.20.20.80 1 165 8.8E-71 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS21345 2a1ce6c1f57e860d25f1f8bfd3787a74 181 SUPERFAMILY SSF51445 1 165 1.62E-47 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS13910 e8efd92232f8e56b620a84ace8183448 338 SMART SM01126 154 299 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS13910 e8efd92232f8e56b620a84ace8183448 338 Pfam PF12762 ISXO2-like transposase domain 154 299 3.4E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS13910 e8efd92232f8e56b620a84ace8183448 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS15345 42cd38e81b5562ea4c3ce6fd01d667a3 411 Pfam PF01610 Transposase 155 390 7.1E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS15345 42cd38e81b5562ea4c3ce6fd01d667a3 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS16630 35e02c1a59501561ed186d9c306fcbdf 223 SUPERFAMILY SSF74653 136 214 7.19E-20 T 11-11-2016 ATY42_RS16630 35e02c1a59501561ed186d9c306fcbdf 223 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 144 210 8.0E-21 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS16630 35e02c1a59501561ed186d9c306fcbdf 223 Gene3D G3DSA:3.30.1150.10 135 209 3.9E-13 T 11-11-2016 ATY42_RS16630 35e02c1a59501561ed186d9c306fcbdf 223 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 146 209 1.0E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 35.345 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 SMART SM00562 3 140 1.0E-83 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-11-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 Gene3D G3DSA:3.30.70.141 1 140 1.3E-57 T 11-11-2016 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 5.8E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 5.8E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 5.8E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 5.8E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 5.8E-41 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.4E-53 T 11-11-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ATY42_RS12565 10ffb9406244f13436ae0a009d3a2301 141 SUPERFAMILY SSF54919 1 140 2.23E-55 T 11-11-2016 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 1.8E-6 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00410 Phenol hydroxylase reductase family signature 88 97 1.8E-6 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00410 Phenol hydroxylase reductase family signature 200 208 1.8E-6 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00410 Phenol hydroxylase reductase family signature 21 33 1.8E-6 T 11-11-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 SUPERFAMILY SSF52343 97 234 7.33E-33 T 11-11-2016 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 105 124 1.2E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 144 155 1.2E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 41 48 1.2E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 200 208 1.2E-6 T 11-11-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 Gene3D G3DSA:3.40.50.80 94 232 6.5E-38 T 11-11-2016 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 Pfam PF00970 Oxidoreductase FAD-binding domain 9 93 1.9E-10 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 Pfam PF00175 Oxidoreductase NAD-binding domain 106 212 1.5E-17 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 SUPERFAMILY SSF63380 3 99 4.48E-17 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS01730 61617ea0c626e96568aec7236f3cb7aa 240 Gene3D G3DSA:2.40.30.10 3 93 1.2E-16 T 11-11-2016 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 SUPERFAMILY SSF55347 168 316 8.01E-20 T 11-11-2016 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 287 302 1.4E-19 T 11-11-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 90 106 1.4E-19 T 11-11-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 152 166 1.4E-19 T 11-11-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 335 351 1.4E-19 T 11-11-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 36 49 1.4E-19 T 11-11-2016 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 Gene3D G3DSA:3.40.50.720 33 180 5.8E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 Gene3D G3DSA:3.30.360.10 181 364 4.8E-34 T 11-11-2016 ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 SUPERFAMILY SSF51735 28 191 5.91E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18750 e1338e4594f03aa21e14db1bbee63d44 369 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 162 4.0E-24 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 ATY42_RS20750 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20750 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS20750 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20750 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS16920 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16920 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS16920 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16920 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS12485 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12485 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS12485 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12485 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS21980 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21980 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS21980 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21980 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS00800 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00800 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS00800 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00800 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS00690 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00690 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS00690 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00690 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS16810 b19e2832ff8ae1c13d996c87e1af6a1a 144 SUPERFAMILY SSF53098 3 131 1.82E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16810 b19e2832ff8ae1c13d996c87e1af6a1a 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS16810 b19e2832ff8ae1c13d996c87e1af6a1a 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16810 b19e2832ff8ae1c13d996c87e1af6a1a 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 Gene3D G3DSA:3.30.70.920 60 144 3.6E-33 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 1.4E-12 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 1.4E-12 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 1.4E-12 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 SMART SM00344 7 116 3.4E-33 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 Pfam PF01037 Lrp/AsnC ligand binding domain 73 146 9.3E-23 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 Gene3D G3DSA:1.10.10.10 5 58 1.2E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 2.2E-16 T 11-11-2016 ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 SUPERFAMILY SSF46785 6 66 9.1E-16 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01170 cbacc12abbc4193cde506b5a5a57dab5 160 SUPERFAMILY SSF54909 67 156 2.01E-21 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS05910 f355eaff98b5fb82b87acc12d587646d 695 Pfam PF01569 PAP2 superfamily 357 435 1.1E-9 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS05910 f355eaff98b5fb82b87acc12d587646d 695 Gene3D G3DSA:1.20.144.10 265 437 3.6E-14 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS05910 f355eaff98b5fb82b87acc12d587646d 695 Pfam PF09335 SNARE associated Golgi protein 39 162 3.3E-19 T 11-11-2016 IPR032816 SNARE associated Golgi protein ATY42_RS05910 f355eaff98b5fb82b87acc12d587646d 695 SUPERFAMILY SSF48317 244 444 8.07E-25 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS05910 f355eaff98b5fb82b87acc12d587646d 695 Pfam PF14067 LssY C-terminus 498 607 1.0E-9 T 11-11-2016 IPR025902 LssY-like C-terminal domain ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 576 693 4.4E-36 T 11-11-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 SUPERFAMILY SSF47323 388 546 8.72E-40 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Gene3D G3DSA:2.20.28.20 142 173 9.2E-18 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 SUPERFAMILY SSF57770 139 173 9.81E-12 T 11-11-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Gene3D G3DSA:2.40.50.140 587 693 2.2E-36 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Pfam PF09334 tRNA synthetases class I (M) 6 395 2.8E-148 T 11-11-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 535 4.6E-159 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 SUPERFAMILY SSF52374 173 385 8.57E-88 T 11-11-2016 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 SUPERFAMILY SSF52374 4 138 8.57E-88 T 11-11-2016 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Pfam PF01588 Putative tRNA binding domain 597 691 7.7E-20 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 289 304 8.7E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 8.7E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 8.7E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 383 394 8.7E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 8.7E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 8.7E-25 T 11-11-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 SUPERFAMILY SSF50249 587 693 4.41E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 545 38.587 T 11-11-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Gene3D G3DSA:1.10.730.10 380 534 4.2E-38 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Gene3D G3DSA:3.40.50.620 5 141 2.9E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS09375 b8f9ac3a775f66482d461c58b1407aba 694 Gene3D G3DSA:3.40.50.620 180 379 2.9E-75 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS11325 f0234bab1289e05a4ed6069141c076db 168 Gene3D G3DSA:3.10.180.10 11 159 2.9E-31 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS11325 f0234bab1289e05a4ed6069141c076db 168 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 118 4.7E-15 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS11325 f0234bab1289e05a4ed6069141c076db 168 SUPERFAMILY SSF54593 14 164 7.47E-33 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 Pfam PF03448 MgtE intracellular N domain 23 123 1.0E-19 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 Pfam PF01769 Divalent cation transporter 313 444 2.1E-30 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 Gene3D G3DSA:1.10.357.20 273 451 1.3E-58 T 11-11-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 SMART SM00116 198 246 1.1E-10 T 11-11-2016 IPR000644 CBS domain ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 Gene3D G3DSA:1.25.60.10 11 117 1.7E-17 T 11-11-2016 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 SUPERFAMILY SSF161093 273 450 2.09E-47 T 11-11-2016 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 13 450 3.2E-101 T 11-11-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 SMART SM00924 22 125 6.4E-23 T 11-11-2016 IPR006668 Magnesium transporter, MgtE intracellular domain ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 Pfam PF00571 CBS domain 195 245 7.3E-10 T 11-11-2016 IPR000644 CBS domain ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 SUPERFAMILY SSF54631 124 266 7.34E-27 T 11-11-2016 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 Gene3D G3DSA:3.10.580.10 118 252 2.8E-17 T 11-11-2016 ATY42_RS02200 b35f8241149100d3b22a461bdc8ce8e4 455 SUPERFAMILY SSF158791 12 122 3.01E-18 T 11-11-2016 ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 SUPERFAMILY SSF50104 3 99 2.41E-29 T 11-11-2016 IPR008991 Translation protein SH3-like domain ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 102 6.9E-23 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.169 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 Pfam PF00467 KOW motif 7 35 5.1E-6 T 11-11-2016 IPR005824 KOW ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 102 1.9E-32 T 11-11-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 SMART SM00739 4 31 1.3E-5 T 11-11-2016 IPR005824 KOW ATY42_RS17990 8a2ef680ed148c862c8292320da19eea 105 Gene3D G3DSA:2.30.30.30 4 92 1.6E-20 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 ATY42_RS09235 87c63fb3d2a81c255c60f19a78946767 403 Gene3D G3DSA:1.20.1250.20 213 396 2.2E-15 T 11-11-2016 ATY42_RS09235 87c63fb3d2a81c255c60f19a78946767 403 Pfam PF07690 Major Facilitator Superfamily 23 339 1.3E-37 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS09235 87c63fb3d2a81c255c60f19a78946767 403 Gene3D G3DSA:1.20.1250.20 19 209 8.0E-32 T 11-11-2016 ATY42_RS09235 87c63fb3d2a81c255c60f19a78946767 403 SUPERFAMILY SSF103473 8 395 7.85E-61 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS07520 4373f03ab2138685a78e1c61f78066c1 793 Gene3D G3DSA:2.40.170.20 182 793 7.9E-64 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS07520 4373f03ab2138685a78e1c61f78066c1 793 SUPERFAMILY SSF56935 35 793 5.95E-90 T 11-11-2016 ATY42_RS07520 4373f03ab2138685a78e1c61f78066c1 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 56 166 1.1E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS07520 4373f03ab2138685a78e1c61f78066c1 793 Gene3D G3DSA:2.170.130.10 34 178 2.1E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS07520 4373f03ab2138685a78e1c61f78066c1 793 Pfam PF00593 TonB dependent receptor 553 792 7.6E-17 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 Gene3D G3DSA:3.90.230.10 5 253 1.0E-101 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 SUPERFAMILY SSF55920 5 250 1.83E-95 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 4.7E-23 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 4.7E-23 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 4.7E-23 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 4.7E-23 T 11-11-2016 IPR001714 Peptidase M24, methionine aminopeptidase ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 42.224 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 250 7.5E-100 T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 Pfam PF00557 Metallopeptidase family M24 12 242 2.0E-56 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS09640 c0601f36ddf5033451d88f9233e2f842 258 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 11-11-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 SUPERFAMILY SSF100920 385 541 3.01E-59 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 193 206 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Pfam PF00012 Hsp70 protein 4 601 9.9E-261 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:1.20.1270.10 533 602 5.1E-24 T 11-11-2016 IPR029048 Heat shock protein 70kD, C-terminal domain Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:3.90.640.10 231 316 4.8E-31 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:3.30.420.40 4 52 6.6E-65 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:3.30.420.40 120 196 6.6E-65 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 338 352 - T 11-11-2016 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:2.60.34.10 391 532 2.4E-68 T 11-11-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 601 1.1E-284 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 199 209 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 139 159 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 366 386 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 470 486 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 389 408 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 PRINTS PR00301 70kDa heat shock protein signature 335 351 2.4E-81 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:3.30.30.30 53 106 5.2E-26 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 SUPERFAMILY SSF53067 188 383 7.41E-68 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 636 36.307 T 11-11-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 SUPERFAMILY SSF53067 4 185 3.11E-66 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:3.30.420.40 320 362 4.8E-34 T 11-11-2016 ATY42_RS09855 7a54c06b7171bcb4427aa8573d97f506 641 Gene3D G3DSA:3.30.420.40 197 230 4.8E-34 T 11-11-2016 ATY42_RS22145 8bd9dc7b3574737635e2b85f9caf1cdc 211 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 163 18.918 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ATY42_RS22145 8bd9dc7b3574737635e2b85f9caf1cdc 211 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 79 2.6E-26 T 11-11-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 ATY42_RS22145 8bd9dc7b3574737635e2b85f9caf1cdc 211 Pfam PF02416 mttA/Hcf106 family 4 33 3.1E-5 T 11-11-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ATY42_RS22145 8bd9dc7b3574737635e2b85f9caf1cdc 211 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 1.3E-20 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 ATY42_RS22145 8bd9dc7b3574737635e2b85f9caf1cdc 211 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 1.3E-20 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 ATY42_RS22145 8bd9dc7b3574737635e2b85f9caf1cdc 211 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 1.3E-20 T 11-11-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 Gene3D G3DSA:2.40.33.10 77 171 2.1E-26 T 11-11-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 473 3.8E-24 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 Gene3D G3DSA:3.20.20.60 6 76 1.2E-92 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 Gene3D G3DSA:3.20.20.60 172 328 1.2E-92 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 SUPERFAMILY SSF50800 74 171 4.54E-24 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 476 2.0E-156 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 11-11-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 SUPERFAMILY SSF52935 327 476 1.7E-34 T 11-11-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 272 296 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 63 79 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 247 271 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 190 204 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 297 315 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 220 246 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 PRINTS PR01050 Pyruvate kinase family signature 316 332 4.8E-56 T 11-11-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 Pfam PF00224 Pyruvate kinase, barrel domain 6 342 7.1E-122 T 11-11-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 Gene3D G3DSA:3.40.1380.20 329 476 3.1E-37 T 11-11-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 SUPERFAMILY SSF51621 171 342 8.72E-88 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS17105 1759f6666915a507b357f6b5fa1e1ed2 488 SUPERFAMILY SSF51621 4 79 8.72E-88 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS21250 bfcad1dbf375e224025e7107b44d0b5a 419 Pfam PF13487 HD domain 229 291 9.9E-15 T 11-11-2016 ATY42_RS21250 bfcad1dbf375e224025e7107b44d0b5a 419 Gene3D G3DSA:1.10.3210.10 168 336 3.2E-21 T 11-11-2016 IPR006674 HD domain ATY42_RS21250 bfcad1dbf375e224025e7107b44d0b5a 419 SMART SM00471 174 310 1.8E-11 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS21250 bfcad1dbf375e224025e7107b44d0b5a 419 TIGRFAM TIGR00277 HDIG: HDIG domain 178 268 3.5E-10 T 11-11-2016 IPR006675 HDIG domain ATY42_RS21250 bfcad1dbf375e224025e7107b44d0b5a 419 SUPERFAMILY SSF109604 172 338 1.08E-29 T 11-11-2016 ATY42_RS21250 bfcad1dbf375e224025e7107b44d0b5a 419 Pfam PF11871 Domain of unknown function (DUF3391) 3 147 4.6E-29 T 11-11-2016 IPR021812 Protein of unknown function DUF3391 ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 Gene3D G3DSA:2.160.20.20 372 613 0.001 T 11-11-2016 IPR012332 P22 tailspike C-terminal domain-like ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 SMART SM00869 642 900 3.0E-27 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 Gene3D G3DSA:2.40.128.130 640 911 2.1E-35 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 309 325 5.1E-6 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 89 108 5.1E-6 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 PRINTS PR00723 Subtilisin serine protease family (S8) signature 131 144 5.1E-6 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 399 429 5.1E-11 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 467 911 4.5E-5 T 11-11-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 Pfam PF03797 Autotransporter beta-domain 644 894 3.5E-29 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 Pfam PF00082 Subtilase family 89 360 6.4E-39 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 SUPERFAMILY SSF52743 77 373 4.06E-48 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 SUPERFAMILY SSF103515 638 911 1.07E-27 T 11-11-2016 IPR005546 Autotransporter beta-domain ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 Gene3D G3DSA:3.40.50.200 76 371 5.6E-50 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS11800 9a66bd7793004e449f935ce7a6f6d8e7 911 Pfam PF12951 Passenger-associated-transport-repeat 400 429 3.6E-9 T 11-11-2016 IPR013425 Autotransporter-associated beta strand repeat ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 402 494 6.2E-29 T 11-11-2016 IPR025158 Mg chelatase-related protein, C-terminal domain ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 Gene3D G3DSA:3.30.230.10 6 167 1.1E-26 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 SMART SM00382 210 392 6.0E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 Gene3D G3DSA:3.40.50.300 190 389 1.4E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 494 1.4E-195 T 11-11-2016 IPR004482 Mg chelatase-related protein ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 190 394 3.2E-97 T 11-11-2016 IPR000523 Magnesium chelatase ChlI domain ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 3.7E-45 T 11-11-2016 ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 SUPERFAMILY SSF54211 9 169 7.59E-32 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 SUPERFAMILY SSF52540 190 498 7.31E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 317 330 1.4E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 209 224 1.4E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 289 303 1.4E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 ATY42_RS00910 e878778e11bcb9aea98ef46f575ab09a 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 341 353 1.4E-6 T 11-11-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 154 6.9E-36 T 11-11-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 PIRSF PIRSF000102 1 326 8.2E-63 T 11-11-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 7.1E-141 T 11-11-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 327 55.078 T 11-11-2016 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 159 320 8.6E-30 T 11-11-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 Gene3D G3DSA:3.40.50.720 3 155 4.8E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 Gene3D G3DSA:3.90.110.10 157 327 4.0E-69 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 SUPERFAMILY SSF51735 3 157 8.77E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04655 7ad0d73c29c4db2d6b6156233fbf6a04 328 SUPERFAMILY SSF56327 159 327 4.01E-57 T 11-11-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 Gene3D G3DSA:3.40.50.1100 42 142 1.8E-41 T 11-11-2016 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 303 1.1E-124 T 11-11-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 303 2.6E-131 T 11-11-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 1.4E-63 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 Gene3D G3DSA:3.40.50.1100 148 308 8.3E-68 T 11-11-2016 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 Gene3D G3DSA:3.40.50.1100 2 41 8.3E-68 T 11-11-2016 ATY42_RS17080 ef0257140ff4fe0ae3b0504f0a1981af 319 SUPERFAMILY SSF53686 2 305 1.96E-92 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS05555 c8d0bdc134a9e0b45530146adfd94729 385 Gene3D G3DSA:3.80.30.20 9 241 5.1E-28 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe ATY42_RS05555 c8d0bdc134a9e0b45530146adfd94729 385 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 9 359 3.8E-110 T 11-11-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 ATY42_RS05555 c8d0bdc134a9e0b45530146adfd94729 385 Pfam PF06969 HemN C-terminal domain 311 373 5.2E-9 T 11-11-2016 IPR010723 HemN, C-terminal ATY42_RS05555 c8d0bdc134a9e0b45530146adfd94729 385 SUPERFAMILY SSF102114 4 384 1.24E-106 T 11-11-2016 ATY42_RS05555 c8d0bdc134a9e0b45530146adfd94729 385 Pfam PF04055 Radical SAM superfamily 13 175 5.9E-20 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS05555 c8d0bdc134a9e0b45530146adfd94729 385 SMART SM00729 8 225 1.2E-50 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 206 225 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 PRINTS PR00173 Glutamate-aspartate symporter signature 10 30 2.9E-18 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 Pfam PF00375 Sodium:dicarboxylate symporter family 12 415 1.5E-112 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 Gene3D G3DSA:1.10.3860.10 5 421 9.5E-107 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS16540 58e5f4ef319ad6aae57677e67e42ece7 439 SUPERFAMILY SSF118215 12 415 2.48E-101 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS04555 9aa302e65c703f724d484874b9014821 625 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 590 1.3E-214 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ATY42_RS04555 9aa302e65c703f724d484874b9014821 625 Pfam PF01964 Radical SAM ThiC family 139 586 7.5E-200 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ATY42_RS04555 9aa302e65c703f724d484874b9014821 625 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 592 56.215 T 11-11-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ATY42_RS04555 9aa302e65c703f724d484874b9014821 625 Pfam PF13667 ThiC-associated domain 22 98 1.3E-29 T 11-11-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ATY42_RS16880 bbac25435f397ed7c08402109a12ce7b 264 SUPERFAMILY SSF110399 8 250 7.06E-89 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ATY42_RS16880 bbac25435f397ed7c08402109a12ce7b 264 Hamap MF_00443 Thiazole synthase [thiG]. 9 264 42.678 T 11-11-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ATY42_RS16880 bbac25435f397ed7c08402109a12ce7b 264 Pfam PF05690 Thiazole biosynthesis protein ThiG 12 258 1.8E-111 T 11-11-2016 ATY42_RS16880 bbac25435f397ed7c08402109a12ce7b 264 Gene3D G3DSA:3.20.20.70 18 239 2.6E-55 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SUPERFAMILY SSF81767 227 364 1.7E-42 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Pfam PF07516 SecA Wing and Scaffold domain 615 826 5.5E-64 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 829 20.025 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Gene3D G3DSA:3.40.50.300 413 616 3.3E-90 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SUPERFAMILY SSF81886 888 900 2.75E-79 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SUPERFAMILY SSF81886 618 837 2.75E-79 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Pfam PF02810 SEC-C motif 892 910 1.1E-10 T 11-11-2016 IPR004027 SEC-C motif ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Pfam PF07517 SecA DEAD-like domain 7 398 1.9E-133 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Pfam PF01043 SecA preprotein cross-linking domain 233 354 7.9E-38 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SMART SM00957 6 398 0.0 T 11-11-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 101 115 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 409 422 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 63 87 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 372 389 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 170 190 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 117 127 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 PRINTS PR00906 SecA protein signature 335 357 1.9E-71 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Gene3D G3DSA:1.10.3060.10 645 828 9.3E-56 T 11-11-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SMART SM00958 228 354 5.3E-75 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SUPERFAMILY SSF52540 364 411 1.14E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SUPERFAMILY SSF52540 6 228 1.14E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Gene3D G3DSA:3.90.1440.10 230 364 1.2E-44 T 11-11-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 815 0.0 T 11-11-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Gene3D G3DSA:3.40.50.300 2 228 1.4E-128 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 Gene3D G3DSA:3.40.50.300 365 412 1.4E-128 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 ProSitePatterns PS01312 SecA family signature. 496 511 - T 11-11-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ATY42_RS19210 9e5f4a413e91615c7b94edfc97ff5598 912 SUPERFAMILY SSF52540 412 615 1.55E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05015 e51a4b8b4e1b29ae4a6db23843d9ca8a 234 Pfam PF13672 Protein phosphatase 2C 17 193 1.0E-12 T 11-11-2016 ATY42_RS05015 e51a4b8b4e1b29ae4a6db23843d9ca8a 234 SUPERFAMILY SSF81606 2 232 2.75E-61 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS05015 e51a4b8b4e1b29ae4a6db23843d9ca8a 234 SMART SM00331 8 233 2.3E-27 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS05015 e51a4b8b4e1b29ae4a6db23843d9ca8a 234 SMART SM00332 3 231 2.2E-16 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS05015 e51a4b8b4e1b29ae4a6db23843d9ca8a 234 Gene3D G3DSA:3.60.40.10 2 232 4.9E-62 T 11-11-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 434 9.1E-165 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 SUPERFAMILY SSF52540 1 166 1.37E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 159 3.4E-25 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 344 7.5E-26 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Gene3D G3DSA:3.40.50.300 3 166 2.1E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Gene3D G3DSA:3.40.50.300 178 359 3.1E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Pfam PF01926 50S ribosome-binding GTPase 180 298 6.4E-24 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Pfam PF01926 50S ribosome-binding GTPase 5 120 8.1E-27 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 356 434 1.1E-22 T 11-11-2016 IPR032859 GTPase Der, C-terminal KH-domain-like ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Hamap MF_00195 GTPase Der [der]. 2 437 36.668 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 SMART SM00382 177 325 0.036 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 SMART SM00382 1 148 4.7 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 Gene3D G3DSA:3.30.300.20 360 435 5.8E-21 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 PIRSF PIRSF006485 1 442 3.5E-166 T 11-11-2016 IPR016484 GTP-binding protein EngA GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.7E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-8 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS12535 b3605548870dfb2f4548b3e47db2c8b1 465 SUPERFAMILY SSF52540 171 440 8.8E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12880 592ef6ba3193e779fab3569dd59473d4 507 Pfam PF05050 Methyltransferase FkbM domain 345 455 2.4E-9 T 11-11-2016 IPR006342 Methyltransferase FkbM ATY42_RS12880 592ef6ba3193e779fab3569dd59473d4 507 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 323 452 2.0E-16 T 11-11-2016 IPR006342 Methyltransferase FkbM ATY42_RS12880 592ef6ba3193e779fab3569dd59473d4 507 SUPERFAMILY SSF53335 153 494 2.33E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12880 592ef6ba3193e779fab3569dd59473d4 507 Gene3D G3DSA:3.40.50.150 304 494 8.9E-47 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.5E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.5E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.5E-7 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 Gene3D G3DSA:1.10.10.10 6 88 7.3E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 Gene3D G3DSA:3.40.190.10 89 181 4.0E-14 T 11-11-2016 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 SUPERFAMILY SSF53850 88 295 2.02E-36 T 11-11-2016 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-33 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 Gene3D G3DSA:3.40.190.10 182 259 1.7E-15 T 11-11-2016 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 4.4E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS21770 bedee69cf6438964006e6ce9eb82c711 304 SUPERFAMILY SSF46785 6 111 1.04E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:3.40.50.300 6 53 1.6E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:3.40.50.300 602 673 1.7E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:3.40.50.300 480 598 1.6E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:3.40.50.300 822 943 1.7E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:1.20.1580.10 409 479 2.0E-51 T 11-11-2016 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:1.20.1580.10 93 131 2.0E-51 T 11-11-2016 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:1.20.1580.10 253 286 2.0E-51 T 11-11-2016 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:1.10.8.280 289 408 2.9E-41 T 11-11-2016 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 SUPERFAMILY SSF52540 616 915 1.61E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:3.30.1490.20 132 155 9.3E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:3.30.1490.20 202 250 9.3E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Gene3D G3DSA:1.20.1580.10 695 821 3.1E-54 T 11-11-2016 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 SUPERFAMILY SSF52540 3 206 2.5E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 SUPERFAMILY SSF52540 432 571 2.5E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 941 22.525 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 ProSitePatterns PS00211 ABC transporters family signature. 831 845 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 926 0.0 T 11-11-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 ATY42_RS07965 4b666980464cc0894bbdb8c02f3f3d0b 988 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS22455 442b1959a5a03f1ed986b1365e035813 464 SUPERFAMILY SSF53590 110 359 7.33E-31 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS22455 442b1959a5a03f1ed986b1365e035813 464 Gene3D G3DSA:3.90.245.10 113 345 1.3E-18 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS22455 442b1959a5a03f1ed986b1365e035813 464 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 113 407 1.1E-11 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS06345 6d792cb36d3822c241c924b79f6e9760 227 Pfam PF11306 Protein of unknown function (DUF3108) 12 216 1.4E-19 T 11-11-2016 IPR021457 Protein of unknown function DUF3108 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Gene3D G3DSA:3.50.50.60 358 415 2.9E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Gene3D G3DSA:3.50.50.60 7 62 2.9E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Gene3D G3DSA:3.50.50.60 112 134 2.9E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Gene3D G3DSA:3.50.50.60 192 269 2.9E-58 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Gene3D G3DSA:3.30.9.10 270 311 9.0E-6 T 11-11-2016 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Gene3D G3DSA:3.30.9.10 147 191 9.0E-6 T 11-11-2016 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 Pfam PF01266 FAD dependent oxidoreductase 7 397 7.4E-61 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 SUPERFAMILY SSF54373 270 357 1.44E-14 T 11-11-2016 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 SUPERFAMILY SSF51905 111 270 2.14E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 SUPERFAMILY SSF51905 358 415 2.14E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 SUPERFAMILY SSF51905 7 58 2.14E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.6E-5 T 11-11-2016 ATY42_RS16505 dac766654333d1c48ae8597c6c4a88b0 416 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 410 416 2.6E-5 T 11-11-2016 ATY42_RS06690 e6bf0299ee1009bbdb8d6dd621188108 281 SUPERFAMILY SSF53098 108 268 1.77E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06690 e6bf0299ee1009bbdb8d6dd621188108 281 Pfam PF13683 Integrase core domain 199 264 7.3E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS06690 e6bf0299ee1009bbdb8d6dd621188108 281 Pfam PF13276 HTH-like domain 46 99 9.2E-10 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS06690 e6bf0299ee1009bbdb8d6dd621188108 281 Gene3D G3DSA:3.30.420.10 109 265 7.9E-42 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 Pfam PF03600 Citrate transporter 23 563 6.6E-39 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 SUPERFAMILY SSF116726 337 413 5.23E-15 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 Pfam PF02080 TrkA-C domain 338 403 4.3E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 Pfam PF02080 TrkA-C domain 246 313 4.1E-8 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 SUPERFAMILY SSF116726 240 313 3.01E-9 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 Gene3D G3DSA:3.30.70.1450 336 413 1.9E-18 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATY42_RS16890 69734a8d14ece4104b7b917dc02df875 620 Gene3D G3DSA:3.30.70.1450 244 318 2.8E-10 T 11-11-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 402 45.004 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 Gene3D G3DSA:3.90.1150.10 308 403 3.8E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 Gene3D G3DSA:3.90.1150.10 14 58 3.8E-33 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 Gene3D G3DSA:3.40.640.10 59 303 4.3E-88 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 Pfam PF00202 Aminotransferase class-III 21 398 2.2E-116 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 SUPERFAMILY SSF53383 13 402 3.76E-121 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS05945 d7080aaf96f12d343bd4d8b171127fad 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 15 400 5.7E-141 T 11-11-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ATY42_RS17870 bfc32a52cf1966e383f4382e65a298c8 231 SMART SM00990 73 186 8.1E-16 T 11-11-2016 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 ATY42_RS17870 bfc32a52cf1966e383f4382e65a298c8 231 Pfam PF08774 VRR-NUC domain 89 176 2.4E-7 T 11-11-2016 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 ATY42_RS05335 993d3de89749ad5fdbc341c7ac1e208e 442 Pfam PF03600 Citrate transporter 13 386 6.3E-57 T 11-11-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 ATY42_RS05335 993d3de89749ad5fdbc341c7ac1e208e 442 TIGRFAM TIGR00784 citMHS: citrate transporter 1 436 5.8E-190 T 11-11-2016 IPR014738 Citrate transporter GO:0015137|GO:0015746 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 SMART SM00387 322 423 1.6E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 SMART SM00388 213 279 4.9E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 SUPERFAMILY SSF47384 196 275 1.77E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 Gene3D G3DSA:3.30.565.10 280 422 1.2E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 328 421 5.6E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 276 1.0E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 Gene3D G3DSA:1.10.287.130 206 275 4.7E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 5.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 5.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 5.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 5.3E-13 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS18940 4b270c3d7c50f1d594dcc84dd5248e28 423 SUPERFAMILY SSF55874 280 422 5.11E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 SUPERFAMILY SSF81336 88 260 4.97E-39 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 PRINTS PR00123 ATP synthase A subunit signature 246 261 1.0E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 PRINTS PR00123 ATP synthase A subunit signature 96 112 1.0E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 PRINTS PR00123 ATP synthase A subunit signature 193 215 1.0E-12 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 ProSitePatterns PS00449 ATP synthase a subunit signature. 196 205 - T 11-11-2016 IPR023011 ATPase, F0 complex, subunit A, active site Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 Pfam PF00119 ATP synthase A chain 39 260 2.2E-55 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 32 260 8.9E-42 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 Gene3D G3DSA:1.20.120.220 89 266 6.3E-48 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS03500 43906372652b56cdfe152a160c7dffc7 266 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 266 14.999 T 11-11-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 Reactome: R-HSA-163210 ATY42_RS01800 60f9f71dbba576a2c6752cdc65bd76e1 745 Gene3D G3DSA:3.40.50.1820 491 740 2.6E-88 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01800 60f9f71dbba576a2c6752cdc65bd76e1 745 SUPERFAMILY SSF82171 21 472 2.22E-55 T 11-11-2016 ATY42_RS01800 60f9f71dbba576a2c6752cdc65bd76e1 745 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 129 451 3.9E-93 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS01800 60f9f71dbba576a2c6752cdc65bd76e1 745 Pfam PF00326 Prolyl oligopeptidase family 547 740 1.3E-55 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS01800 60f9f71dbba576a2c6752cdc65bd76e1 745 Gene3D G3DSA:2.140.10.30 23 472 6.3E-113 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS01800 60f9f71dbba576a2c6752cdc65bd76e1 745 SUPERFAMILY SSF53474 492 740 2.13E-74 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS16090 f7761dc24689158283eac5ef76deabfc 461 Pfam PF14793 Domain of unknown function (DUF4478) 17 122 7.7E-39 T 11-11-2016 IPR027820 Domain of unknown function DUF4478 ATY42_RS16090 f7761dc24689158283eac5ef76deabfc 461 Pfam PF03641 Possible lysine decarboxylase 198 337 1.7E-28 T 11-11-2016 IPR031100 LOG family ATY42_RS16090 f7761dc24689158283eac5ef76deabfc 461 SUPERFAMILY SSF102405 130 337 7.63E-39 T 11-11-2016 ATY42_RS16090 f7761dc24689158283eac5ef76deabfc 461 Pfam PF11892 Domain of unknown function (DUF3412) 342 459 5.9E-52 T 11-11-2016 IPR021826 Protein of unknown function DUF3412 ATY42_RS16090 f7761dc24689158283eac5ef76deabfc 461 Gene3D G3DSA:3.40.50.450 135 459 1.8E-109 T 11-11-2016 ATY42_RS16090 f7761dc24689158283eac5ef76deabfc 461 Gene3D G3DSA:3.30.1850.10 14 125 7.4E-42 T 11-11-2016 IPR027820 Domain of unknown function DUF4478 ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 Gene3D G3DSA:1.10.166.10 125 193 2.9E-27 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 SUPERFAMILY SSF51161 126 379 2.91E-71 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 Gene3D G3DSA:2.160.10.10 212 377 1.8E-58 T 11-11-2016 ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 126 192 1.4E-21 T 11-11-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 129 395 3.0E-127 T 11-11-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 123 395 54.243 T 11-11-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 255 289 9.3E-5 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS09650 03b99f898fe4b761e33994cf9da62699 398 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 298 332 6.8E-11 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 Gene3D G3DSA:3.90.1170.20 12 139 1.4E-44 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 22 288 1.7E-81 T 11-11-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 120 288 4.1E-51 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 Gene3D G3DSA:3.20.20.70 140 278 1.7E-51 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 SUPERFAMILY SSF51690 120 289 5.89E-52 T 11-11-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 SUPERFAMILY SSF54675 12 117 1.26E-26 T 11-11-2016 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 30 117 1.5E-20 T 11-11-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ATY42_RS16140 a71d7d9c3d57a736e6f511e7bb47c2e5 295 PIRSF PIRSF006250 14 291 4.9E-81 T 11-11-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ATY42_RS05315 6ff857006ec741d886325524e5a6aa91 443 SUPERFAMILY SSF103473 13 436 1.03E-36 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS05315 6ff857006ec741d886325524e5a6aa91 443 Pfam PF07690 Major Facilitator Superfamily 21 391 6.5E-20 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS05315 6ff857006ec741d886325524e5a6aa91 443 Gene3D G3DSA:1.20.1250.20 242 434 2.3E-13 T 11-11-2016 ATY42_RS05315 6ff857006ec741d886325524e5a6aa91 443 Gene3D G3DSA:1.20.1250.20 13 207 1.2E-17 T 11-11-2016 ATY42_RS02065 79e5c245c6e2dfbd739d845ad1aaaf0f 104 Gene3D G3DSA:1.10.10.60 21 66 1.1E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 Gene3D G3DSA:2.30.40.10 341 371 9.1E-5 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 7 381 3.9E-95 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 PIRSF PIRSF038994 5 384 1.1E-110 T 11-11-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 SUPERFAMILY SSF51556 61 355 1.81E-94 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 Gene3D G3DSA:2.30.40.10 7 62 1.5E-12 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 Gene3D G3DSA:3.20.20.140 63 340 4.9E-91 T 11-11-2016 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 SUPERFAMILY SSF51338 355 382 8.44E-13 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 SUPERFAMILY SSF51338 8 60 8.44E-13 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS19720 f4c4d340d079f8464dcd39f931abe214 384 Pfam PF01979 Amidohydrolase family 57 382 6.3E-27 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 SMART SM00977 354 427 1.0E-14 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 SUPERFAMILY SSF52402 13 223 1.35E-56 T 11-11-2016 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 Gene3D G3DSA:3.40.50.620 15 181 4.6E-10 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 17 198 5.3E-48 T 11-11-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 399 8.4E-13 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 302 22.466 T 11-11-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 Pfam PF01171 PP-loop family 17 194 5.4E-54 T 11-11-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 Pfam PF11734 TilS substrate C-terminal domain 356 427 1.2E-15 T 11-11-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 Pfam PF09179 TilS substrate binding domain 243 310 6.0E-10 T 11-11-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 SUPERFAMILY SSF82829 233 313 5.49E-16 T 11-11-2016 ATY42_RS16550 40322b3a0874b37f0bbe2c5440384408 434 SUPERFAMILY SSF56037 318 419 1.94E-19 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 Pfam PF00849 RNA pseudouridylate synthase 99 237 8.7E-17 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 137 151 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 SUPERFAMILY SSF55120 99 271 3.52E-35 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 SUPERFAMILY SSF55174 39 122 7.46E-12 T 11-11-2016 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 Gene3D G3DSA:3.10.290.10 39 101 4.9E-14 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 103 267 2.9E-39 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS18600 1d59ef09c7bdda464959dec391fb59ae 286 Pfam PF01479 S4 domain 39 80 3.1E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS09040 e7add8841c1f5f8ebc4eb863012fa9b4 525 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 21 237 8.8E-69 T 11-11-2016 IPR007357 Deoxyribodipyrimidine photolyase-related protein ATY42_RS09040 e7add8841c1f5f8ebc4eb863012fa9b4 525 Gene3D G3DSA:1.25.40.80 202 335 2.2E-12 T 11-11-2016 ATY42_RS09040 e7add8841c1f5f8ebc4eb863012fa9b4 525 SUPERFAMILY SSF48173 244 501 5.76E-57 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 ATY42_RS20205 a829c4dbbc7a7ecd86442915a7b4289f 309 SMART SM00065 25 168 0.0044 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS20205 a829c4dbbc7a7ecd86442915a7b4289f 309 SUPERFAMILY SSF55781 26 158 8.63E-20 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS20205 a829c4dbbc7a7ecd86442915a7b4289f 309 Gene3D G3DSA:3.30.450.40 27 152 6.9E-6 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS13635 e68cdcffaff1e7ebe961e3f6e2bc1dbc 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS13635 e68cdcffaff1e7ebe961e3f6e2bc1dbc 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS13635 e68cdcffaff1e7ebe961e3f6e2bc1dbc 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10500 e68cdcffaff1e7ebe961e3f6e2bc1dbc 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS10500 e68cdcffaff1e7ebe961e3f6e2bc1dbc 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10500 e68cdcffaff1e7ebe961e3f6e2bc1dbc 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS03670 bfdc43a01f51d217c5cef621c6620d8e 171 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 3 171 5.2E-93 T 11-11-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS03670 bfdc43a01f51d217c5cef621c6620d8e 171 Pfam PF07977 FabA-like domain 28 157 1.9E-50 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS03670 bfdc43a01f51d217c5cef621c6620d8e 171 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 1 171 49.269 T 11-11-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS03670 bfdc43a01f51d217c5cef621c6620d8e 171 SUPERFAMILY SSF54637 2 169 2.09E-53 T 11-11-2016 IPR029069 HotDog domain ATY42_RS03670 bfdc43a01f51d217c5cef621c6620d8e 171 Gene3D G3DSA:3.10.129.10 3 167 1.5E-54 T 11-11-2016 IPR029069 HotDog domain ATY42_RS10140 74f37d705d41325b7c5041dc63a5a73f 109 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 3 61 1.3E-9 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS10140 74f37d705d41325b7c5041dc63a5a73f 109 SUPERFAMILY SSF51316 3 79 1.15E-16 T 11-11-2016 IPR011057 Mss4-like ATY42_RS10140 74f37d705d41325b7c5041dc63a5a73f 109 Gene3D G3DSA:3.90.1590.10 2 108 1.5E-19 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS22310 48f1e44d7a03c13a80598a7f8b4c52e8 151 Pfam PF12792 CSS motif domain associated with EAL 40 150 2.3E-18 T 11-11-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 Gene3D G3DSA:1.10.150.20 200 266 1.8E-22 T 11-11-2016 ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 SMART SM00279 187 222 3.4E-10 T 11-11-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 21 182 1.0E-38 T 11-11-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 SUPERFAMILY SSF47807 185 304 1.47E-23 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 Gene3D G3DSA:3.40.50.1010 20 199 1.5E-50 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 185 279 2.4E-23 T 11-11-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 SUPERFAMILY SSF88723 20 174 8.1E-41 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS18330 1254dba17aef51e14eb0860cae2c2cd4 328 SMART SM00475 19 282 3.9E-73 T 11-11-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 SUPERFAMILY SSF51735 8 244 4.28E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 Gene3D G3DSA:3.40.50.720 2 244 9.1E-73 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.9E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 7.9E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.9E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.9E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.9E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.9E-40 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.7E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.7E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.7E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 1.3E-6 T 11-11-2016 ATY42_RS02135 73dfba34bf28abd11fec2464fd6393e8 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 244 7.2E-49 T 11-11-2016 ATY42_RS02590 5d7c2b708f3b0928d91477f5b8965b92 133 SUPERFAMILY SSF53474 47 129 2.17E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02590 5d7c2b708f3b0928d91477f5b8965b92 133 Gene3D G3DSA:3.40.50.1820 38 131 7.4E-13 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02590 5d7c2b708f3b0928d91477f5b8965b92 133 Pfam PF12146 Serine aminopeptidase, S33 38 132 1.2E-23 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 ATY42_RS04315 25964e41d5419fba9e61d6d937a2d788 401 Gene3D G3DSA:3.10.310.10 2 198 2.6E-90 T 11-11-2016 ATY42_RS04315 25964e41d5419fba9e61d6d937a2d788 401 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 4 397 1.3E-235 T 11-11-2016 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 ATY42_RS04315 25964e41d5419fba9e61d6d937a2d788 401 SUPERFAMILY SSF54506 192 396 3.66E-75 T 11-11-2016 ATY42_RS04315 25964e41d5419fba9e61d6d937a2d788 401 Gene3D G3DSA:3.10.310.10 199 377 2.0E-78 T 11-11-2016 ATY42_RS04315 25964e41d5419fba9e61d6d937a2d788 401 Pfam PF04303 PrpF protein 6 394 9.1E-174 T 11-11-2016 IPR007400 PrpF protein ATY42_RS04315 25964e41d5419fba9e61d6d937a2d788 401 SUPERFAMILY SSF54506 2 182 4.16E-71 T 11-11-2016 ATY42_RS17095 6ae703e276354f1640ae130a05e180a0 179 SUPERFAMILY SSF52949 1 171 1.09E-62 T 11-11-2016 ATY42_RS17095 6ae703e276354f1640ae130a05e180a0 179 SMART SM00506 2 137 4.7E-53 T 11-11-2016 IPR002589 Macro domain ATY42_RS17095 6ae703e276354f1640ae130a05e180a0 179 Gene3D G3DSA:3.40.220.10 2 174 8.3E-70 T 11-11-2016 ATY42_RS17095 6ae703e276354f1640ae130a05e180a0 179 Pfam PF01661 Macro domain 19 137 4.9E-43 T 11-11-2016 IPR002589 Macro domain ATY42_RS15200 5b6ebac4092b11e7c4b5b490c5389cec 295 Gene3D G3DSA:3.40.190.10 144 239 5.7E-20 T 11-11-2016 ATY42_RS15200 5b6ebac4092b11e7c4b5b490c5389cec 295 Gene3D G3DSA:1.10.10.10 1 52 3.5E-11 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15200 5b6ebac4092b11e7c4b5b490c5389cec 295 Pfam PF03466 LysR substrate binding domain 95 266 4.3E-19 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS15200 5b6ebac4092b11e7c4b5b490c5389cec 295 Gene3D G3DSA:3.40.190.10 60 143 1.2E-17 T 11-11-2016 ATY42_RS15200 5b6ebac4092b11e7c4b5b490c5389cec 295 Gene3D G3DSA:3.40.190.10 243 268 1.2E-17 T 11-11-2016 ATY42_RS15200 5b6ebac4092b11e7c4b5b490c5389cec 295 SUPERFAMILY SSF53850 60 266 1.56E-31 T 11-11-2016 ATY42_RS08845 a59b89b849dbefbce08a69f3f87fa1c2 77 SUPERFAMILY SSF52833 3 74 1.07E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS08845 a59b89b849dbefbce08a69f3f87fa1c2 77 Gene3D G3DSA:3.40.30.10 1 74 1.8E-26 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS08845 a59b89b849dbefbce08a69f3f87fa1c2 77 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 72 3.5E-13 T 11-11-2016 IPR008554 Glutaredoxin-like ATY42_RS15660 5270f7b4f4fe6eb119992fc4feb33e31 1454 SUPERFAMILY SSF49785 878 1028 7.8E-12 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS15660 5270f7b4f4fe6eb119992fc4feb33e31 1454 Pfam PF00754 F5/8 type C domain 891 1016 5.4E-7 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain ATY42_RS15660 5270f7b4f4fe6eb119992fc4feb33e31 1454 Pfam PF07532 Bacterial Ig-like domain (group 4) 1304 1355 9.4E-9 T 11-11-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 ATY42_RS15660 5270f7b4f4fe6eb119992fc4feb33e31 1454 Pfam PF07532 Bacterial Ig-like domain (group 4) 1381 1434 5.5E-11 T 11-11-2016 IPR011081 Bacterial Ig-related KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 ATY42_RS15660 5270f7b4f4fe6eb119992fc4feb33e31 1454 SUPERFAMILY SSF48208 298 801 8.5E-17 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS15660 5270f7b4f4fe6eb119992fc4feb33e31 1454 Gene3D G3DSA:2.60.120.260 875 1032 2.3E-14 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS16080 205472e5fddb2b6f014d2ed6fe7395e6 157 TIGRFAM TIGR02523 type_IV_pilV: type IV pilus modification protein PilV 13 135 1.4E-28 T 11-11-2016 IPR013362 Pilus modification type IV, PilV ATY42_RS16080 205472e5fddb2b6f014d2ed6fe7395e6 157 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 13 32 2.1E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS16080 205472e5fddb2b6f014d2ed6fe7395e6 157 Pfam PF13633 Prokaryotic N-terminal methylation site 13 33 1.8E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 SMART SM00829 10 367 0.004 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 7.6E-26 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 Gene3D G3DSA:3.90.180.10 2 190 9.5E-69 T 11-11-2016 IPR011032 GroES-like ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 SUPERFAMILY SSF50129 1 187 4.26E-72 T 11-11-2016 IPR011032 GroES-like ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 Gene3D G3DSA:3.40.50.720 191 309 9.0E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.1E-23 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.0E-224 T 11-11-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|Reactome: R-HSA-71384 ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 SUPERFAMILY SSF51735 160 333 2.82E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19485 1d7df43183fc7958cdef95e40a2b5a85 369 SUPERFAMILY SSF50129 318 369 2.82E-12 T 11-11-2016 IPR011032 GroES-like ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 6 597 1.7E-265 T 11-11-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SMART SM00487 14 210 3.6E-25 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SUPERFAMILY SSF52540 5 189 5.43E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Gene3D G3DSA:1.10.150.80 528 595 5.8E-17 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SUPERFAMILY SSF47819 523 596 2.62E-21 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SMART SM00341 524 597 2.2E-9 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Pfam PF16124 RecQ zinc-binding 335 397 6.3E-19 T 11-11-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SMART SM00490 242 323 5.9E-23 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Pfam PF00270 DEAD/DEAH box helicase 22 177 2.5E-17 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Gene3D G3DSA:3.40.50.300 198 336 4.8E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 3.5E-154 T 11-11-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Gene3D G3DSA:3.40.50.300 4 193 1.7E-55 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Pfam PF00570 HRDC domain 528 594 3.6E-21 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Pfam PF00271 Helicase conserved C-terminal domain 219 323 3.3E-13 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Pfam PF09382 RQC domain 401 507 9.1E-42 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 Gene3D G3DSA:1.10.10.10 337 507 7.0E-62 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SUPERFAMILY SSF52540 200 451 2.26E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08335 23288b0b23a21bce1b0f0ad632dc2d2b 598 SMART SM00956 404 507 1.3E-56 T 11-11-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ATY42_RS02405 472cd70e919c2aba70629921fabc17e5 431 Pfam PF07690 Major Facilitator Superfamily 31 382 2.3E-21 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS02405 472cd70e919c2aba70629921fabc17e5 431 SUPERFAMILY SSF103473 19 427 3.14E-33 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS02405 472cd70e919c2aba70629921fabc17e5 431 Gene3D G3DSA:1.20.1250.20 25 213 8.7E-15 T 11-11-2016 ATY42_RS02405 472cd70e919c2aba70629921fabc17e5 431 Gene3D G3DSA:1.20.1250.20 244 422 2.3E-11 T 11-11-2016 ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 Gene3D G3DSA:3.20.20.140 1 253 3.6E-78 T 11-11-2016 ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 PIRSF PIRSF005902 1 255 7.2E-66 T 11-11-2016 IPR001130 TatD family GO:0016788 ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-11-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 SUPERFAMILY SSF51556 3 253 8.47E-79 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS07435 2d030a0ef10f7cd40e225d4e03f755d0 255 Pfam PF01026 TatD related DNase 4 252 1.3E-65 T 11-11-2016 IPR001130 TatD family GO:0016788 ATY42_RS16240 3ba838d5fe0ab4c09ca493f44258c59f 435 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 24 435 5.7E-181 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16240 3ba838d5fe0ab4c09ca493f44258c59f 435 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 15 435 48.965 T 11-11-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16240 3ba838d5fe0ab4c09ca493f44258c59f 435 SUPERFAMILY SSF56762 34 435 4.06E-134 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16240 3ba838d5fe0ab4c09ca493f44258c59f 435 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 138 435 9.1E-119 T 11-11-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16240 3ba838d5fe0ab4c09ca493f44258c59f 435 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 61 72 - T 11-11-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16240 3ba838d5fe0ab4c09ca493f44258c59f 435 Gene3D G3DSA:1.10.645.10 18 420 3.5E-65 T 11-11-2016 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 Gene3D G3DSA:3.40.50.410 100 271 1.2E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 SUPERFAMILY SSF53300 99 276 1.44E-19 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 Pfam PF13519 von Willebrand factor type A domain 102 209 2.2E-11 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 Pfam PF00515 Tetratricopeptide repeat 391 421 6.9E-10 T 11-11-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 SMART SM00327 99 288 1.4E-9 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 SUPERFAMILY SSF48452 364 437 4.34E-11 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 Gene3D G3DSA:1.25.40.10 362 441 7.6E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS05705 7006ff91db92fcccd416b966450721b7 600 SMART SM00028 389 422 5.3E-7 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 44 435 1.0E-98 T 11-11-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 320 332 4.1E-27 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 223 237 4.1E-27 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 4.1E-27 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 370 386 4.1E-27 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 418 435 4.1E-27 T 11-11-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 SUPERFAMILY SSF53335 145 435 1.04E-61 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 433 6.8E-52 T 11-11-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 319 330 - T 11-11-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 SUPERFAMILY SSF48013 13 149 7.36E-26 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 Gene3D G3DSA:3.40.50.150 235 435 2.0E-46 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 Pfam PF01029 NusB family 13 134 2.8E-18 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 Gene3D G3DSA:3.30.70.1170 174 231 1.5E-21 T 11-11-2016 ATY42_RS02810 5c2c2d424ad830a1a19ba5d42b9554d5 437 Gene3D G3DSA:1.10.940.10 11 150 9.6E-32 T 11-11-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ATY42_RS15300 5a1bff7ee2b17891608a33ddbfc33c3a 625 PIRSF PIRSF028304 1 625 5.4E-178 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like ATY42_RS15300 5a1bff7ee2b17891608a33ddbfc33c3a 625 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 623 4.1E-215 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like ATY42_RS15300 5a1bff7ee2b17891608a33ddbfc33c3a 625 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 624 4.0E-196 T 11-11-2016 IPR010272 Type VI secretion system, TssF-like ATY42_RS13495 9e4350ad9526ad47a8df34df287e24c4 292 Hamap MF_00188 Protease HtpX [htpX]. 2 287 25.89 T 11-11-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 ATY42_RS13495 9e4350ad9526ad47a8df34df287e24c4 292 Gene3D G3DSA:3.30.2010.10 70 157 3.5E-33 T 11-11-2016 ATY42_RS13495 9e4350ad9526ad47a8df34df287e24c4 292 Pfam PF01435 Peptidase family M48 76 286 4.4E-41 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ATY42_RS14675 02e766849c96f730fe7c743d5a67692d 139 Pfam PF13730 Helix-turn-helix domain 20 69 2.3E-8 T 11-11-2016 ATY42_RS14675 02e766849c96f730fe7c743d5a67692d 139 Gene3D G3DSA:1.10.10.10 16 89 3.1E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05435 d03d5d5c8bc328fbea62e3d4d655dc27 281 Pfam PF13276 HTH-like domain 46 98 4.7E-7 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS05435 d03d5d5c8bc328fbea62e3d4d655dc27 281 SUPERFAMILY SSF53098 108 268 1.06E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05435 d03d5d5c8bc328fbea62e3d4d655dc27 281 Gene3D G3DSA:3.30.420.10 109 265 1.5E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05435 d03d5d5c8bc328fbea62e3d4d655dc27 281 Pfam PF13683 Integrase core domain 198 264 4.9E-28 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS20900 d940168bbf80efaa1f9e33e31ff7c96e 71 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 5.6E-13 T 11-11-2016 IPR007419 BFD-like [2Fe-2S]-binding domain ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 SUPERFAMILY SSF55060 187 302 9.11E-22 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 Gene3D G3DSA:3.30.70.890 181 308 8.0E-27 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 PRINTS PR00958 Homoserine kinase signature 153 166 8.5E-24 T 11-11-2016 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 PRINTS PR00958 Homoserine kinase signature 188 205 8.5E-24 T 11-11-2016 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 PRINTS PR00958 Homoserine kinase signature 113 128 8.5E-24 T 11-11-2016 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 PRINTS PR00958 Homoserine kinase signature 267 282 8.5E-24 T 11-11-2016 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 PRINTS PR00958 Homoserine kinase signature 28 43 8.5E-24 T 11-11-2016 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 Gene3D G3DSA:3.30.230.10 21 173 1.1E-38 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 Pfam PF08544 GHMP kinases C terminal 228 300 1.0E-9 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 PIRSF PIRSF000676 17 321 5.2E-76 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 Hamap MF_00384 Homoserine kinase [thrB]. 21 321 27.982 T 11-11-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 Pfam PF00288 GHMP kinases N terminal domain 100 166 9.2E-9 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 ATY42_RS10970 044e847afa37d2fa70503d74220ccc31 322 SUPERFAMILY SSF54211 22 180 2.13E-26 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 PRINTS PR01402 Mutator MutX protein signature 105 125 2.9E-10 T 11-11-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 PRINTS PR01402 Mutator MutX protein signature 27 42 2.9E-10 T 11-11-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 PRINTS PR01402 Mutator MutX protein signature 125 142 2.9E-10 T 11-11-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 PRINTS PR01402 Mutator MutX protein signature 9 27 2.9E-10 T 11-11-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 PRINTS PR01402 Mutator MutX protein signature 74 100 2.9E-10 T 11-11-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 Gene3D G3DSA:3.90.79.10 6 153 9.2E-31 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 SUPERFAMILY SSF55811 2 138 1.33E-25 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 ProSitePatterns PS00893 Nudix box signature. 43 64 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS10805 0884a4c9eb9740432eb2840627c66168 162 Pfam PF00293 NUDIX domain 12 134 1.2E-16 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS13135 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS13135 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10305 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10305 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00150 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00150 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS13040 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS13040 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS17165 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17165 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05240 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS05240 061c217e4c03f9953ea6bf17a2478ab3 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS18975 60a56d803eba49dc77862dc5d3865534 275 Gene3D G3DSA:3.40.50.300 4 224 8.6E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18975 60a56d803eba49dc77862dc5d3865534 275 SMART SM00382 34 215 2.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS18975 60a56d803eba49dc77862dc5d3865534 275 SUPERFAMILY SSF52540 7 241 1.87E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18975 60a56d803eba49dc77862dc5d3865534 275 Pfam PF00005 ABC transporter 26 167 5.0E-26 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS08735 f133f6de53ad8a50d20067389daf1a29 131 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATY42_RS08735 f133f6de53ad8a50d20067389daf1a29 131 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 30.822 T 11-11-2016 IPR002930 Glycine cleavage system H-protein ATY42_RS08735 f133f6de53ad8a50d20067389daf1a29 131 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 5.2E-49 T 11-11-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ATY42_RS08735 f133f6de53ad8a50d20067389daf1a29 131 Gene3D G3DSA:2.40.50.100 7 128 1.6E-48 T 11-11-2016 ATY42_RS08735 f133f6de53ad8a50d20067389daf1a29 131 SUPERFAMILY SSF51230 4 128 1.09E-44 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS08735 f133f6de53ad8a50d20067389daf1a29 131 Pfam PF01597 Glycine cleavage H-protein 8 128 5.7E-44 T 11-11-2016 IPR002930 Glycine cleavage system H-protein ATY42_RS22945 2df5eded1ba9124df4cdc5c41926e90a 223 Pfam PF03737 Demethylmenaquinone methyltransferase 25 172 6.0E-40 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATY42_RS22945 2df5eded1ba9124df4cdc5c41926e90a 223 SUPERFAMILY SSF89562 22 182 6.93E-49 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATY42_RS22945 2df5eded1ba9124df4cdc5c41926e90a 223 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 4 223 5.7E-113 T 11-11-2016 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 ATY42_RS22945 2df5eded1ba9124df4cdc5c41926e90a 223 Gene3D G3DSA:3.50.30.40 22 179 3.8E-48 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATY42_RS10745 b76d9bb0d76e75adbdc9652b91c5f948 68 SUPERFAMILY SSF46785 2 67 1.31E-13 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10745 b76d9bb0d76e75adbdc9652b91c5f948 68 Gene3D G3DSA:1.10.10.10 2 67 2.0E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10745 b76d9bb0d76e75adbdc9652b91c5f948 68 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.9E-13 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS20170 ca6e212037102295bcb433a07b96c01c 495 SUPERFAMILY SSF52091 401 485 3.53E-11 T 11-11-2016 IPR002645 STAS domain ATY42_RS20170 ca6e212037102295bcb433a07b96c01c 495 Pfam PF00916 Sulfate permease family 18 359 5.8E-43 T 11-11-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ATY42_RS20170 ca6e212037102295bcb433a07b96c01c 495 Gene3D G3DSA:3.30.750.24 400 484 1.3E-8 T 11-11-2016 IPR002645 STAS domain ATY42_RS20170 ca6e212037102295bcb433a07b96c01c 495 Pfam PF01740 STAS domain 401 485 8.7E-6 T 11-11-2016 IPR002645 STAS domain ATY42_RS00985 eabfed1cb445c1d31413622b3cd902f3 562 Pfam PF11394 Protein of unknown function (DUF2875) 106 550 1.5E-170 T 11-11-2016 IPR021531 Protein of unknown function DUF2875 ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 Pfam PF10150 Ribonuclease E/G family 117 386 8.7E-96 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 SUPERFAMILY SSF50249 37 121 3.23E-18 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 Hamap MF_00970 Ribonuclease E [rne]. 1 1129 35.063 T 11-11-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 420 6.2E-163 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 Pfam PF00575 S1 RNA binding domain 33 114 3.4E-12 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 SMART SM00316 34 115 3.0E-10 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS15420 f7949e252066c73b75c764c1c0cf539d 1237 Gene3D G3DSA:2.40.50.140 27 121 1.5E-34 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09515 f203e44f0ebf362a224cd096499db55c 726 SUPERFAMILY SSF56935 61 726 1.03E-75 T 11-11-2016 ATY42_RS09515 f203e44f0ebf362a224cd096499db55c 726 Gene3D G3DSA:2.170.130.10 92 213 1.9E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS09515 f203e44f0ebf362a224cd096499db55c 726 Pfam PF00593 TonB dependent receptor 477 724 1.1E-15 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS09515 f203e44f0ebf362a224cd096499db55c 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 91 208 8.2E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS09515 f203e44f0ebf362a224cd096499db55c 726 Gene3D G3DSA:2.40.170.20 214 691 7.2E-50 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01980 99c3fa06cf74885f1e3311e546b24ce1 227 SUPERFAMILY SSF52540 9 197 4.05E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01980 99c3fa06cf74885f1e3311e546b24ce1 227 Gene3D G3DSA:3.40.50.300 8 200 5.8E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01980 99c3fa06cf74885f1e3311e546b24ce1 227 Pfam PF02223 Thymidylate kinase 14 187 1.3E-39 T 11-11-2016 ATY42_RS01980 99c3fa06cf74885f1e3311e546b24ce1 227 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 9 188 1.9E-41 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ATY42_RS01980 99c3fa06cf74885f1e3311e546b24ce1 227 Hamap MF_00165 Thymidylate kinase [tmk]. 10 200 22.189 T 11-11-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 Pfam PF01578 Cytochrome C assembly protein 89 295 4.7E-51 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 310 329 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 210 236 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 244 264 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 274 294 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 294 310 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 159 181 1.7E-89 T 11-11-2016 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 636 7.6E-218 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 315 634 2.0E-115 T 11-11-2016 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 394 413 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 351 368 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 627 640 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 313 328 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 189 204 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15045 0422aa2fbb9e99c71adb0ba6577475bc 662 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.1E-53 T 11-11-2016 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 335 357 1.5E-19 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 358 372 1.5E-19 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 85 97 1.5E-19 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 126 145 1.5E-19 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 SUPERFAMILY SSF53335 303 388 6.75E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 SUPERFAMILY SSF53335 60 252 6.75E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 Gene3D G3DSA:3.40.50.150 61 224 6.4E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 Gene3D G3DSA:3.40.50.150 286 435 6.4E-66 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 PIRSF PIRSF015855 2 542 2.0E-148 T 11-11-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 ATY42_RS21205 384d917067854772cf8cf5fc7ecb2b42 543 Pfam PF01555 DNA methylase 85 378 2.0E-46 T 11-11-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 Gene3D G3DSA:3.40.50.9100 3 145 3.5E-64 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 SUPERFAMILY SSF52304 3 144 1.44E-59 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 142 2.0E-65 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-11-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 PIRSF PIRSF001399 1 146 1.0E-56 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 72.109 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 Pfam PF01220 Dehydroquinase class II 4 140 1.0E-56 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS02670 db9684687993a4d709386b5fc4f57a16 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 142 2.1E-55 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 Pfam PF14559 Tetratricopeptide repeat 201 255 1.0E-5 T 11-11-2016 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 SUPERFAMILY SSF48452 201 375 5.18E-13 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 Gene3D G3DSA:1.25.40.10 42 108 4.3E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 Gene3D G3DSA:1.25.40.10 197 379 4.3E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 SUPERFAMILY SSF56935 432 548 4.27E-5 T 11-11-2016 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 Gene3D G3DSA:2.40.170.20 476 667 2.6E-4 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19700 144e78f14e8618997ea4387e32c76c5c 680 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 35 678 1.9E-133 T 11-11-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 ProSitePatterns PS00079 Multicopper oxidases signature 1. 584 604 - T 11-11-2016 IPR033138 Multicopper oxidases, conserved site ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 SUPERFAMILY SSF49503 66 204 2.33E-39 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 Gene3D G3DSA:2.60.40.420 178 381 1.9E-47 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 Gene3D G3DSA:2.60.40.420 487 607 1.5E-37 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 Pfam PF07731 Multicopper oxidase 494 607 6.6E-26 T 11-11-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 SUPERFAMILY SSF49503 457 606 1.44E-36 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 Gene3D G3DSA:2.60.40.420 60 171 1.3E-31 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 13 607 2.9E-299 T 11-11-2016 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 ProSitePatterns PS00080 Multicopper oxidases signature 2. 589 600 - T 11-11-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 43 0.0011 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 SUPERFAMILY SSF49503 177 382 3.17E-53 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 Pfam PF07732 Multicopper oxidase 63 172 4.3E-39 T 11-11-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 Pfam PF00394 Multicopper oxidase 183 360 3.8E-31 T 11-11-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 ATY42_RS03640 abe3000dde9129a797236fbf5ba03da1 608 ProSitePatterns PS00079 Multicopper oxidases signature 1. 148 168 - T 11-11-2016 IPR033138 Multicopper oxidases, conserved site ATY42_RS16475 b201de1f439998c273259e267c903069 231 Pfam PF00665 Integrase core domain 88 180 1.7E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS16475 b201de1f439998c273259e267c903069 231 SUPERFAMILY SSF53098 78 221 4.43E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16475 b201de1f439998c273259e267c903069 231 Gene3D G3DSA:3.30.420.10 78 221 6.7E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08255 895ac0c0a50a8d4067afaa031d24b850 236 SUPERFAMILY SSF55120 65 234 9.18E-20 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS08255 895ac0c0a50a8d4067afaa031d24b850 236 Gene3D G3DSA:3.10.290.10 3 66 1.2E-16 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS08255 895ac0c0a50a8d4067afaa031d24b850 236 Pfam PF01479 S4 domain 6 41 1.4E-6 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS08255 895ac0c0a50a8d4067afaa031d24b850 236 SUPERFAMILY SSF55174 5 56 3.79E-10 T 11-11-2016 ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 Gene3D G3DSA:3.40.50.970 478 709 1.6E-107 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 SUPERFAMILY SSF52922 706 893 3.66E-59 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 139 294 1.8E-7 T 11-11-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 9 893 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 SUPERFAMILY SSF52518 478 704 3.09E-89 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 SUPERFAMILY SSF52518 60 472 2.82E-133 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 PIRSF PIRSF000156 1 895 0.0 T 11-11-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 Gene3D G3DSA:3.40.50.920 711 893 1.3E-75 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS21335 940aeb659e83430acb0654eea98b468c 895 Gene3D G3DSA:3.40.50.970 59 473 1.5E-147 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS06630 3571e7389d6319e77fb56c6dd77e7b66 173 PIRSF PIRSF006135 1 171 4.9E-52 T 11-11-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06630 3571e7389d6319e77fb56c6dd77e7b66 173 Gene3D G3DSA:3.40.50.300 3 169 5.6E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06630 3571e7389d6319e77fb56c6dd77e7b66 173 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 167 1.4E-57 T 11-11-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06630 3571e7389d6319e77fb56c6dd77e7b66 173 SUPERFAMILY SSF52540 3 169 5.79E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 Gene3D G3DSA:3.20.20.210 1 353 2.9E-149 T 11-11-2016 ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 3 350 1.6E-137 T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 SUPERFAMILY SSF51726 1 353 4.01E-115 T 11-11-2016 ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 4 352 49.774 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 7 349 1.2E-129 T 11-11-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS06090 9a2a4ac564346598024317826fe5a4e9 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 20 29 - T 11-11-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ATY42_RS20635 3a26dd9246c383d3b9514e00b68ebf25 470 SUPERFAMILY SSF54001 305 419 4.32E-17 T 11-11-2016 ATY42_RS20635 3a26dd9246c383d3b9514e00b68ebf25 470 Pfam PF12913 SH3 domain (SH3b1 type) 161 206 3.6E-17 T 11-11-2016 ATY42_RS20635 3a26dd9246c383d3b9514e00b68ebf25 470 Pfam PF12914 SH3 domain of SH3b2 type 216 265 8.7E-5 T 11-11-2016 IPR026864 SH3b2-type SH3 domain ATY42_RS20635 3a26dd9246c383d3b9514e00b68ebf25 470 Gene3D G3DSA:3.90.1720.10 310 416 2.6E-20 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain ATY42_RS20635 3a26dd9246c383d3b9514e00b68ebf25 470 PIRSF PIRSF019015 3 465 3.0E-72 T 11-11-2016 IPR027017 Uncharacterised peptidase with NlpC/P60 domain, YkfC type ATY42_RS20635 3a26dd9246c383d3b9514e00b68ebf25 470 Pfam PF00877 NlpC/P60 family 326 408 9.5E-10 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain ATY42_RS02845 15571cc51db31398d56d674ffbc727c4 377 SUPERFAMILY SSF142695 188 344 2.35E-46 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 ATY42_RS02845 15571cc51db31398d56d674ffbc727c4 377 PIRSF PIRSF001259 23 377 5.0E-88 T 11-11-2016 ATY42_RS02845 15571cc51db31398d56d674ffbc727c4 377 Pfam PF00925 GTP cyclohydrolase II 178 342 8.0E-50 T 11-11-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 ATY42_RS02845 15571cc51db31398d56d674ffbc727c4 377 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 173 369 37.891 T 11-11-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 ATY42_RS07510 15b558c929a3bd1a0df9ea5e7c447b69 110 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 68 5.8E-9 T 11-11-2016 ATY42_RS07510 15b558c929a3bd1a0df9ea5e7c447b69 110 SUPERFAMILY SSF51735 1 96 6.23E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07510 15b558c929a3bd1a0df9ea5e7c447b69 110 Gene3D G3DSA:3.40.50.720 1 95 1.7E-17 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 SMART SM00930 260 333 1.7E-24 T 11-11-2016 IPR018449 NIL domain ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 SUPERFAMILY SSF52540 1 240 3.08E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 Gene3D G3DSA:3.30.70.260 237 334 7.6E-25 T 11-11-2016 ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 Pfam PF09383 NIL domain 262 331 6.0E-19 T 11-11-2016 IPR018449 NIL domain ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 Gene3D G3DSA:3.40.50.300 1 236 4.4E-86 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 Pfam PF00005 ABC transporter 21 169 2.8E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 SMART SM00382 30 217 9.5E-19 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS03435 c1ff83ce7ec91c7431630845ec0fa084 335 SUPERFAMILY SSF55021 260 333 1.83E-16 T 11-11-2016 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 247 301 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 165 183 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 117 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 213 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 19 44 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 136 148 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 66 89 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 315 336 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 428 449 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 368 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 245 266 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 397 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 PRINTS PR01165 Cytochrome c oxidase subunit I signature 291 306 4.3E-124 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 20 521 2.3E-207 T 11-11-2016 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 SUPERFAMILY SSF81442 17 522 1.44E-188 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 Gene3D G3DSA:1.20.210.10 8 524 1.2E-217 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20860 696679c54c5702bace8c3a5f11764061 534 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 28 469 9.4E-149 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS13665 a8b4b1d45059145c26ddfba2ac8da169 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.3E-11 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS13665 a8b4b1d45059145c26ddfba2ac8da169 211 SUPERFAMILY SSF47616 82 207 2.56E-23 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS13665 a8b4b1d45059145c26ddfba2ac8da169 211 SUPERFAMILY SSF52833 10 111 1.86E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS13665 a8b4b1d45059145c26ddfba2ac8da169 211 Gene3D G3DSA:1.20.1050.10 101 207 4.5E-12 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS13665 a8b4b1d45059145c26ddfba2ac8da169 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 193 3.1E-6 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal ATY42_RS13665 a8b4b1d45059145c26ddfba2ac8da169 211 Gene3D G3DSA:3.40.30.10 7 100 7.3E-26 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS01505 f85dd1a01dc456a685f305609dc6c592 194 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 17 176 1.8E-44 T 11-11-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 ATY42_RS01505 f85dd1a01dc456a685f305609dc6c592 194 Pfam PF13671 AAA domain 17 141 1.9E-13 T 11-11-2016 ATY42_RS01505 f85dd1a01dc456a685f305609dc6c592 194 Gene3D G3DSA:3.40.50.300 12 177 1.5E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01505 f85dd1a01dc456a685f305609dc6c592 194 SUPERFAMILY SSF52540 13 178 1.6E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 12 896 0.0 T 11-11-2016 IPR017729 Type VI secretion system, ATPase ClpV1 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 SUPERFAMILY SSF52540 195 555 2.9E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 SUPERFAMILY SSF52540 588 880 3.95E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 330 342 - T 11-11-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Pfam PF07724 AAA domain (Cdc48 subfamily) 639 807 2.6E-42 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 814 890 4.6E-10 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Gene3D G3DSA:3.40.50.300 594 824 2.2E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Gene3D G3DSA:3.40.50.300 196 378 8.9E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 239 351 3.3E-10 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 SMART SM00382 639 799 2.8E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 SMART SM00382 234 379 1.3E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 23 75 1.5E-9 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 717 735 1.4E-34 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 643 661 1.4E-34 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 688 706 1.4E-34 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 750 764 1.4E-34 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Gene3D G3DSA:1.10.1780.10 10 127 5.7E-21 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Gene3D G3DSA:1.10.8.60 825 900 2.2E-8 T 11-11-2016 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 SUPERFAMILY SSF81923 11 127 3.4E-19 T 11-11-2016 IPR004176 Clp, N-terminal GO:0019538 ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 SMART SM01086 813 906 4.9E-8 T 11-11-2016 IPR019489 Clp ATPase, C-terminal ATY42_RS17480 00305ee5e5d9d4810c80d37039fdb868 909 Gene3D G3DSA:1.10.8.60 382 462 1.1E-24 T 11-11-2016 ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 SUPERFAMILY SSF51338 10 68 5.14E-24 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 SUPERFAMILY SSF51338 366 440 5.14E-24 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 SUPERFAMILY SSF51556 68 367 2.77E-95 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 Gene3D G3DSA:2.30.40.10 375 413 1.3E-9 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 Gene3D G3DSA:2.30.40.10 10 70 1.3E-9 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 Pfam PF01979 Amidohydrolase family 66 413 2.9E-65 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS13375 2adea7020270d602a82d767db49c0406 445 Gene3D G3DSA:3.20.20.140 71 374 7.4E-99 T 11-11-2016 ATY42_RS22940 4125610434512443b3734f0a4ce0d529 351 Gene3D G3DSA:3.10.310.10 177 331 4.4E-48 T 11-11-2016 ATY42_RS22940 4125610434512443b3734f0a4ce0d529 351 SUPERFAMILY SSF54506 4 168 5.81E-60 T 11-11-2016 ATY42_RS22940 4125610434512443b3734f0a4ce0d529 351 SUPERFAMILY SSF54506 172 350 1.51E-50 T 11-11-2016 ATY42_RS22940 4125610434512443b3734f0a4ce0d529 351 Pfam PF04303 PrpF protein 4 350 2.1E-107 T 11-11-2016 IPR007400 PrpF protein ATY42_RS22940 4125610434512443b3734f0a4ce0d529 351 Gene3D G3DSA:3.10.310.10 3 176 5.6E-74 T 11-11-2016 ATY42_RS16110 e164e8214f5948c61caf368205d680d3 247 Pfam PF00106 short chain dehydrogenase 17 209 1.4E-34 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16110 e164e8214f5948c61caf368205d680d3 247 Gene3D G3DSA:3.40.50.720 9 243 1.6E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16110 e164e8214f5948c61caf368205d680d3 247 SUPERFAMILY SSF51735 12 243 1.31E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS16110 e164e8214f5948c61caf368205d680d3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 1.0E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16110 e164e8214f5948c61caf368205d680d3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 1.0E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS16110 e164e8214f5948c61caf368205d680d3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.0E-10 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03080 eeb08650c0434a1aadbd1f3d6c488623 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 6.6E-93 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATY42_RS03080 eeb08650c0434a1aadbd1f3d6c488623 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 7 214 3.2E-43 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 Gene3D G3DSA:1.20.1250.20 494 523 3.0E-18 T 11-11-2016 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 Gene3D G3DSA:1.20.1250.20 280 437 3.0E-18 T 11-11-2016 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 151 175 9.5E-5 T 11-11-2016 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 30 54 9.5E-5 T 11-11-2016 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 PRINTS PR01036 Tetracycline resistance protein TetB signature 121 141 9.5E-5 T 11-11-2016 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 SUPERFAMILY SSF103473 21 205 4.32E-64 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 SUPERFAMILY SSF103473 493 524 4.32E-64 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 SUPERFAMILY SSF103473 264 435 4.32E-64 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 Pfam PF07690 Major Facilitator Superfamily 33 425 2.2E-50 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 Gene3D G3DSA:1.20.1250.20 25 207 4.8E-28 T 11-11-2016 ATY42_RS13780 e5c454f892c5413ecea9ce47abdc35d7 528 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 28 513 7.4E-114 T 11-11-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 ATY42_RS07540 8d8fa7e6983b73d4cd0be405ed30b5fa 60 TIGRFAM TIGR04560 ribo_THX: ribosomal small subunit protein bTHX 1 25 1.0E-12 T 11-11-2016 IPR030826 30S ribosomal protein GO:0005840 ATY42_RS07540 8d8fa7e6983b73d4cd0be405ed30b5fa 60 Pfam PF17067 Ribosomal protein S31e 2 38 6.8E-8 T 11-11-2016 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SUPERFAMILY SSF52540 6 288 2.15E-107 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Hamap MF_00054_B Elongation factor G [fusA]. 6 705 108.476 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SMART SM00838 614 701 4.3E-54 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SUPERFAMILY SSF50447 310 407 1.19E-35 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SUPERFAMILY SSF50447 255 281 1.19E-35 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SMART SM00889 485 612 3.3E-68 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Pfam PF00679 Elongation factor G C-terminus 614 700 7.9E-29 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 186 2.8E-32 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Pfam PF14492 Elongation Factor G, domain II 409 483 2.4E-35 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 704 0.0 T 11-11-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SUPERFAMILY SSF54980 617 703 1.92E-28 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SUPERFAMILY SSF54980 409 486 5.76E-26 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Gene3D G3DSA:3.30.230.10 489 612 1.3E-44 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 SUPERFAMILY SSF54211 484 613 9.1E-40 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Gene3D G3DSA:3.30.70.240 613 699 1.6E-31 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 5.8E-66 T 11-11-2016 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Gene3D G3DSA:3.30.70.870 410 485 5.1E-40 T 11-11-2016 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Pfam PF03764 Elongation factor G, domain IV 484 612 2.9E-42 T 11-11-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.8E-18 T 11-11-2016 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.8E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.8E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.8E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.8E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.8E-15 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Gene3D G3DSA:2.40.30.10 313 409 7.7E-38 T 11-11-2016 ATY42_RS18060 4d7bd5d5e6aa35dc05fbce157bf2e380 705 Gene3D G3DSA:3.40.50.300 6 293 2.6E-105 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08465 5b69bc447c148c7c39c9c8d2e57cb6cc 120 Gene3D G3DSA:3.40.50.2300 1 120 1.1E-37 T 11-11-2016 ATY42_RS08465 5b69bc447c148c7c39c9c8d2e57cb6cc 120 SMART SM00448 2 115 3.7E-35 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08465 5b69bc447c148c7c39c9c8d2e57cb6cc 120 Pfam PF00072 Response regulator receiver domain 4 116 6.6E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08465 5b69bc447c148c7c39c9c8d2e57cb6cc 120 SUPERFAMILY SSF52172 1 120 8.4E-36 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS09390 e6936ad3dd7aa7cf896d23bdadedade1 352 Pfam PF13592 Winged helix-turn helix 104 162 2.1E-17 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS09390 e6936ad3dd7aa7cf896d23bdadedade1 352 SUPERFAMILY SSF46689 20 138 1.08E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS09390 e6936ad3dd7aa7cf896d23bdadedade1 352 Pfam PF13551 Winged helix-turn helix 27 86 2.9E-14 T 11-11-2016 ATY42_RS09390 e6936ad3dd7aa7cf896d23bdadedade1 352 Pfam PF13358 DDE superfamily endonuclease 180 317 4.7E-30 T 11-11-2016 ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 Gene3D G3DSA:3.40.50.300 8 172 6.6E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 SUPERFAMILY SSF52540 8 172 1.8E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 Pfam PF02421 Ferrous iron transport protein B 9 167 9.9E-52 T 11-11-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 Pfam PF07670 Nucleoside recognition 455 588 6.2E-25 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 Pfam PF07670 Nucleoside recognition 286 380 4.3E-13 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 31 49 3.3E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 3.3E-5 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS14450 ffea6d471922cbc86cc4fd1d300f5a20 619 Pfam PF07664 Ferrous iron transport protein B C terminus 398 450 1.4E-14 T 11-11-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 791 6.9E-227 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SUPERFAMILY SSF56037 195 392 1.18E-68 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SMART SM00873 211 384 6.1E-85 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Pfam PF03484 tRNA synthetase B5 domain 405 470 8.1E-16 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:3.50.40.10 199 391 3.9E-75 T 11-11-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 Reactome: R-HSA-379716 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 785 43.504 T 11-11-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:2.40.50.140 42 152 6.9E-39 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:3.30.70.380 700 791 1.3E-26 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Pfam PF03147 Ferredoxin-fold anticodon binding domain 698 791 1.3E-25 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Pfam PF01588 Putative tRNA binding domain 45 144 1.8E-24 T 11-11-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SMART SM00874 402 470 1.2E-24 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SUPERFAMILY SSF46955 403 474 1.19E-16 T 11-11-2016 IPR009061 Putative DNA-binding domain ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SMART SM00896 698 791 1.5E-37 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:3.30.56.10 1 38 3.3E-24 T 11-11-2016 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:3.30.56.10 154 182 3.3E-24 T 11-11-2016 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SUPERFAMILY SSF54991 695 791 7.19E-27 T 11-11-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:3.30.930.10 488 688 9.9E-62 T 11-11-2016 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Pfam PF03483 B3/4 domain 212 384 1.1E-63 T 11-11-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SUPERFAMILY SSF55681 466 687 1.19E-49 T 11-11-2016 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 Gene3D G3DSA:3.30.56.20 401 474 2.9E-22 T 11-11-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ATY42_RS15990 5e2951d7d979c100aced9384e5fb43f4 792 SUPERFAMILY SSF50249 39 189 1.44E-42 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16780 a2e6291462640bc2fb1a132be174c7e4 128 Pfam PF13546 DDE superfamily endonuclease 18 93 1.8E-18 T 11-11-2016 ATY42_RS01215 a2e6291462640bc2fb1a132be174c7e4 128 Pfam PF13546 DDE superfamily endonuclease 18 93 1.8E-18 T 11-11-2016 ATY42_RS00840 243b478e8aa0a1342462d5cc8a257138 65 SUPERFAMILY SSF56300 4 61 3.96E-10 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS00840 243b478e8aa0a1342462d5cc8a257138 65 Gene3D G3DSA:3.60.21.10 4 58 2.3E-7 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 Pfam PF01514 Secretory protein of YscJ/FliF family 39 230 5.4E-66 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 Pfam PF08345 Flagellar M-ring protein C-terminal 263 439 1.2E-45 T 11-11-2016 IPR013556 Flagellar M-ring C-terminal ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 12 573 1.2E-82 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 PRINTS PR01009 Flagellar M-ring protein signature 363 387 7.1E-33 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 PRINTS PR01009 Flagellar M-ring protein signature 163 177 7.1E-33 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 PRINTS PR01009 Flagellar M-ring protein signature 206 224 7.1E-33 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 PRINTS PR01009 Flagellar M-ring protein signature 276 294 7.1E-33 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 PRINTS PR01009 Flagellar M-ring protein signature 131 149 7.1E-33 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS12895 44b7515658fd9fd3d3967d13c419229d 574 PIRSF PIRSF004862 6 574 1.4E-134 T 11-11-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ATY42_RS11065 f21ec150b1b6f5d4054ac53667fb55f6 1284 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 600 809 3.0E-136 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11065 f21ec150b1b6f5d4054ac53667fb55f6 1284 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 335 536 5.1E-132 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11065 f21ec150b1b6f5d4054ac53667fb55f6 1284 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 845 1028 2.5E-94 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11670 d5d2fc8abc091f6f2ba381ec1a141207 284 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 80 104 - T 11-11-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ATY42_RS11670 d5d2fc8abc091f6f2ba381ec1a141207 284 Gene3D G3DSA:1.20.1250.20 43 206 1.9E-15 T 11-11-2016 ATY42_RS11670 d5d2fc8abc091f6f2ba381ec1a141207 284 Pfam PF00854 POT family 91 213 6.7E-30 T 11-11-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 ATY42_RS11670 d5d2fc8abc091f6f2ba381ec1a141207 284 SUPERFAMILY SSF103473 58 221 2.49E-17 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS09980 0c99e28d12537a03173aaed7bb35b2cc 144 Pfam PF00665 Integrase core domain 3 89 8.1E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS09980 0c99e28d12537a03173aaed7bb35b2cc 144 SUPERFAMILY SSF53098 3 131 6.83E-23 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09980 0c99e28d12537a03173aaed7bb35b2cc 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS09980 0c99e28d12537a03173aaed7bb35b2cc 144 Gene3D G3DSA:3.30.420.10 4 132 6.3E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 PRINTS PR01021 OMPA domain signature 256 278 7.6E-18 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 PRINTS PR01021 OMPA domain signature 301 317 7.6E-18 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 PRINTS PR01021 OMPA domain signature 286 301 7.6E-18 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 Gene3D G3DSA:4.10.1080.10 213 244 5.6E-4 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 Pfam PF13505 Outer membrane protein beta-barrel domain 7 187 1.6E-19 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel ATY42_RS18610 af96264283670da5a943121e21ccc713 365 SUPERFAMILY SSF103088 253 363 2.22E-35 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS18610 af96264283670da5a943121e21ccc713 365 SUPERFAMILY SSF103647 210 245 4.71E-5 T 11-11-2016 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 Pfam PF00691 OmpA family 255 346 4.7E-23 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS18610 af96264283670da5a943121e21ccc713 365 Gene3D G3DSA:2.40.160.20 14 209 1.9E-15 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS18610 af96264283670da5a943121e21ccc713 365 Gene3D G3DSA:3.30.1330.60 252 363 9.3E-39 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS18610 af96264283670da5a943121e21ccc713 365 SUPERFAMILY SSF56925 27 188 4.19E-17 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 6.5E-73 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 128 149 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 44 64 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 86 106 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 107 127 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 3 22 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 23 43 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PRINTS PR00601 Bacterioferritin signature 65 85 2.1E-68 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 Pfam PF00210 Ferritin-like domain 8 143 1.4E-39 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 PIRSF PIRSF002560 1 156 2.8E-70 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 SUPERFAMILY SSF47240 1 155 4.76E-54 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS20895 dc36945ea695fc61d167c2ad8be6991d 156 Gene3D G3DSA:1.20.1260.10 1 155 2.7E-64 T 11-11-2016 IPR012347 Ferritin-related ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 40 250 1.4E-50 T 11-11-2016 IPR013360 Pilus biogenesis/stability type IV, PilW ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 SUPERFAMILY SSF48452 64 253 1.46E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 SMART SM00028 81 114 34.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 SMART SM00028 47 80 160.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 SMART SM00028 151 184 0.041 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 SMART SM00028 185 218 320.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 Pfam PF13432 Tetratricopeptide repeat 161 216 0.0067 T 11-11-2016 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 Pfam PF13432 Tetratricopeptide repeat 51 113 8.7E-6 T 11-11-2016 ATY42_RS12555 6d36272df1e3fa368a941acb0098bde8 262 Gene3D G3DSA:1.25.40.10 48 254 5.1E-28 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 PRINTS PR00207 Flagellin signature 37 54 2.6E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 PRINTS PR00207 Flagellin signature 76 95 2.6E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 PRINTS PR00207 Flagellin signature 111 134 2.6E-23 T 11-11-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 SUPERFAMILY SSF64518 1 399 4.97E-97 T 11-11-2016 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.9E-40 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 Pfam PF00700 Bacterial flagellin C-terminal helical region 313 398 2.9E-27 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 Gene3D G3DSA:1.20.1330.10 301 355 1.2E-59 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12795 d54e97005341a1eed4bb99cf775b1d06 399 Gene3D G3DSA:1.20.1330.10 54 172 1.2E-59 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS04535 c657be4493a47bb981fcb3ff181d8cff 85 Gene3D G3DSA:3.30.70.260 1 73 2.4E-7 T 11-11-2016 ATY42_RS04535 c657be4493a47bb981fcb3ff181d8cff 85 SUPERFAMILY SSF55021 1 75 2.75E-5 T 11-11-2016 ATY42_RS04535 c657be4493a47bb981fcb3ff181d8cff 85 Pfam PF13710 ACT domain 12 73 6.8E-19 T 11-11-2016 ATY42_RS18585 846b9e7eb0d51c1d0b757f5a2976b976 365 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 46 361 1.4E-148 T 11-11-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ATY42_RS18585 846b9e7eb0d51c1d0b757f5a2976b976 365 SUPERFAMILY SSF53850 56 361 3.22E-83 T 11-11-2016 ATY42_RS18585 846b9e7eb0d51c1d0b757f5a2976b976 365 Gene3D G3DSA:3.40.190.10 148 312 2.7E-74 T 11-11-2016 ATY42_RS18585 846b9e7eb0d51c1d0b757f5a2976b976 365 Pfam PF13531 Bacterial extracellular solute-binding protein 73 314 5.6E-43 T 11-11-2016 ATY42_RS18585 846b9e7eb0d51c1d0b757f5a2976b976 365 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 179 187 - T 11-11-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 Pfam PF00206 Lyase 34 301 2.2E-45 T 11-11-2016 IPR022761 Fumarate lyase, N-terminal ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00149 Fumarate lyase superfamily signature 150 168 2.0E-13 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00149 Fumarate lyase superfamily signature 105 123 2.0E-13 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 2.0E-13 T 11-11-2016 IPR000362 Fumarate lyase family ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00145 Argininosuccinate lyase family signature 145 165 1.4E-30 T 11-11-2016 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00145 Argininosuccinate lyase family signature 196 212 1.4E-30 T 11-11-2016 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 1.4E-30 T 11-11-2016 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00145 Argininosuccinate lyase family signature 313 332 1.4E-30 T 11-11-2016 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 PRINTS PR00145 Argininosuccinate lyase family signature 104 126 1.4E-30 T 11-11-2016 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 429 29.628 T 11-11-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 Gene3D G3DSA:1.20.200.10 110 388 4.6E-59 T 11-11-2016 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 SUPERFAMILY SSF48557 25 402 2.36E-86 T 11-11-2016 IPR008948 L-Aspartase-like GO:0003824 ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 Gene3D G3DSA:1.10.275.10 21 109 1.1E-25 T 11-11-2016 IPR024083 Fumarase/histidase, N-terminal ATY42_RS13205 305987c7d72b5faa55dbaa5a04b20f37 431 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 11-11-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 ATY42_RS22645 ed3be70495c40e7fc28419e8e7fcf632 328 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 200 322 6.0E-40 T 11-11-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent ATY42_RS22645 ed3be70495c40e7fc28419e8e7fcf632 328 SUPERFAMILY SSF53335 290 320 3.05E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22645 ed3be70495c40e7fc28419e8e7fcf632 328 SUPERFAMILY SSF53335 23 247 3.05E-8 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22645 ed3be70495c40e7fc28419e8e7fcf632 328 PIRSF PIRSF018005 1 328 1.1E-133 T 11-11-2016 IPR017804 Methyltransferase EgtD-like ATY42_RS22645 ed3be70495c40e7fc28419e8e7fcf632 328 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 25 324 1.1E-116 T 11-11-2016 IPR017804 Methyltransferase EgtD-like ATY42_RS05775 59eac6decd4e958c7d504169416206d5 224 Gene3D G3DSA:1.20.910.10 1 201 1.2E-16 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS05775 59eac6decd4e958c7d504169416206d5 224 SUPERFAMILY SSF48613 1 213 8.48E-55 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS05775 59eac6decd4e958c7d504169416206d5 224 Pfam PF14518 Iron-containing redox enzyme 39 205 3.8E-26 T 11-11-2016 IPR028201 PqqC-like protein ATY42_RS11085 2273b88befb622109f036ddbed9ed42d 259 Gene3D G3DSA:2.160.20.10 77 257 9.4E-22 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS11085 2273b88befb622109f036ddbed9ed42d 259 Pfam PF16380 Domain of unknown function 183 239 1.9E-10 T 11-11-2016 IPR032153 Domain of unknown function DUF4990 ATY42_RS11085 2273b88befb622109f036ddbed9ed42d 259 SUPERFAMILY SSF51126 80 257 9.42E-15 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS06395 7cba80c0f59c514957055b455e5a8a57 339 Pfam PF01636 Phosphotransferase enzyme family 30 247 9.8E-25 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase ATY42_RS06395 7cba80c0f59c514957055b455e5a8a57 339 Gene3D G3DSA:3.30.200.20 10 97 6.0E-24 T 11-11-2016 ATY42_RS06395 7cba80c0f59c514957055b455e5a8a57 339 Gene3D G3DSA:3.90.1200.10 99 332 5.3E-61 T 11-11-2016 ATY42_RS06395 7cba80c0f59c514957055b455e5a8a57 339 SUPERFAMILY SSF56112 4 307 1.02E-38 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 2.9E-18 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 2.9E-18 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 2.9E-18 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.7E-26 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Pfam PF01632 Ribosomal protein L35 2 62 9.1E-25 T 11-11-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.741 T 11-11-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 SUPERFAMILY SSF143034 2 64 3.4E-23 T 11-11-2016 ATY42_RS16005 b5aa576b98d1d5e292a5ff9fb685cd9b 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-11-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS09485 b2109965d5865f3b5b95780ac07115cd 148 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 148 1.7E-39 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 ATY42_RS09485 b2109965d5865f3b5b95780ac07115cd 148 PIRSF PIRSF004638 1 148 2.4E-39 T 11-11-2016 IPR005265 Uncharacterised protein family UPF0093 ATY42_RS15930 b22c337b9c46b54b0102a3235a90a5d2 497 Pfam PF13440 Polysaccharide biosynthesis protein 43 335 7.2E-78 T 11-11-2016 ATY42_RS02050 debc592506bbf7470bf663f1f950d018 162 Pfam PF00892 EamA-like transporter family 25 156 6.0E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS02050 debc592506bbf7470bf663f1f950d018 162 SUPERFAMILY SSF103481 71 160 9.94E-10 T 11-11-2016 ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 Gene3D G3DSA:3.30.70.20 3 86 5.7E-21 T 11-11-2016 ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 Pfam PF00037 4Fe-4S binding domain 34 56 3.4E-7 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 SUPERFAMILY SSF54862 2 83 2.0E-23 T 11-11-2016 ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.6E-16 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.6E-16 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.6E-16 T 11-11-2016 IPR000813 7Fe ferredoxin GO:0009055 ATY42_RS14565 d1f65a9b3c00504c1a61318bc32a433f 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 1.2E-18 T 11-11-2016 IPR022569 Ferredoxin, C-terminal ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 Gene3D G3DSA:3.30.70.920 61 157 2.8E-30 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 SUPERFAMILY SSF54909 70 157 1.88E-19 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 Pfam PF01037 Lrp/AsnC ligand binding domain 74 148 2.0E-19 T 11-11-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 SMART SM00344 8 117 2.6E-41 T 11-11-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 ProSitePatterns PS00519 AsnC-type HTH domain signature. 26 52 - T 11-11-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 Gene3D G3DSA:1.10.10.10 9 60 7.5E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 SUPERFAMILY SSF46785 7 66 1.69E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 7.9E-18 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 7.9E-18 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 7.9E-18 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS03320 9220a56cf0b9aadc26b6d577aea901dc 159 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 2.7E-18 T 11-11-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 ATY42_RS12125 af7f829a04554094ce2c99aa78123789 175 Gene3D G3DSA:3.40.50.1820 3 174 1.2E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS12125 af7f829a04554094ce2c99aa78123789 175 SUPERFAMILY SSF53474 4 173 4.65E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS12125 af7f829a04554094ce2c99aa78123789 175 Pfam PF05728 Uncharacterised protein family (UPF0227) 10 97 4.6E-5 T 11-11-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 2.1E-17 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF52172 2 130 3.7E-31 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:3.40.50.2300 2 120 6.3E-32 T 11-11-2016 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 1.5E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 1.5E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 1.5E-12 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00421 145 202 2.4E-21 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 SMART SM00448 1 114 1.6E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 Gene3D G3DSA:1.10.10.10 121 206 5.9E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 Pfam PF00072 Response regulator receiver domain 3 114 4.9E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12820 8b16cab7c5e81ad54bc11cab8aec899e 210 SUPERFAMILY SSF46894 139 206 5.78E-19 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS00735 807e7c9e0489af939f487694b90ef38b 385 Gene3D G3DSA:3.30.420.40 90 234 8.4E-26 T 11-11-2016 ATY42_RS00735 807e7c9e0489af939f487694b90ef38b 385 SUPERFAMILY SSF46785 27 85 3.22E-7 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS00735 807e7c9e0489af939f487694b90ef38b 385 SUPERFAMILY SSF53067 95 381 1.47E-25 T 11-11-2016 ATY42_RS00735 807e7c9e0489af939f487694b90ef38b 385 Pfam PF00480 ROK family 102 258 2.8E-16 T 11-11-2016 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ATY42_RS00735 807e7c9e0489af939f487694b90ef38b 385 Gene3D G3DSA:1.10.10.10 28 88 2.2E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS00735 807e7c9e0489af939f487694b90ef38b 385 Gene3D G3DSA:3.30.420.40 235 344 1.6E-11 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Pfam PF01966 HD domain 451 570 5.2E-13 T 11-11-2016 IPR006674 HD domain ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Gene3D G3DSA:3.30.70.260 795 858 2.7E-13 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 33 866 1.8E-224 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 SUPERFAMILY SSF55021 795 863 8.74E-11 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Gene3D G3DSA:3.30.460.10 74 154 1.8E-6 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Pfam PF08335 GlnD PII-uridylyltransferase 178 316 5.6E-29 T 11-11-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 SMART SM00471 446 593 7.8E-9 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 SUPERFAMILY SSF81593 198 317 9.42E-8 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 869 257.872 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Gene3D G3DSA:1.10.3210.10 420 609 2.9E-22 T 11-11-2016 IPR006674 HD domain ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 SUPERFAMILY SSF55021 688 757 3.21E-5 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 SUPERFAMILY SSF81301 21 174 5.09E-16 T 11-11-2016 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 Pfam PF01909 Nucleotidyltransferase domain 72 121 5.8E-5 T 11-11-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 PIRSF PIRSF006288 6 869 4.6E-283 T 11-11-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 ATY42_RS09645 d741b7b24382fceeae79d99cbc05be8f 869 SUPERFAMILY SSF109604 418 541 5.96E-13 T 11-11-2016 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 316 739 2.8E-144 T 11-11-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 Pfam PF14579 Helix-hairpin-helix motif 819 915 7.8E-21 T 11-11-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 Gene3D G3DSA:3.20.20.140 49 247 1.8E-7 T 11-11-2016 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 48 1083 13.042 T 11-11-2016 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 SUPERFAMILY SSF89550 48 126 2.09E-9 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 SUPERFAMILY SSF89550 166 235 2.09E-9 T 11-11-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 Pfam PF02811 PHP domain 50 141 3.0E-12 T 11-11-2016 IPR004013 PHP domain GO:0003824 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 SMART SM00481 49 116 6.2E-11 T 11-11-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 ATY42_RS17265 145a1739d011e9e0afff6739a779f904 1083 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 49 915 1.0E-152 T 11-11-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS07970 7c4f520d166151e580f8a2ad4f87ff26 106 SUPERFAMILY SSF141091 1 100 5.1E-34 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07970 7c4f520d166151e580f8a2ad4f87ff26 106 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-11-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07970 7c4f520d166151e580f8a2ad4f87ff26 106 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.5E-37 T 11-11-2016 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07970 7c4f520d166151e580f8a2ad4f87ff26 106 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 25.658 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07970 7c4f520d166151e580f8a2ad4f87ff26 106 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 1.9E-34 T 11-11-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS13535 0da1e9568b9493e3a933056c94b8d7fb 166 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 9 138 1.7E-32 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ATY42_RS13535 0da1e9568b9493e3a933056c94b8d7fb 166 SUPERFAMILY SSF52540 28 139 3.54E-16 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13535 0da1e9568b9493e3a933056c94b8d7fb 166 Gene3D G3DSA:3.40.50.300 7 150 7.7E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13535 0da1e9568b9493e3a933056c94b8d7fb 166 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 128 1.5E-31 T 11-11-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ATY42_RS07845 51c034fdf965355d4ae5cc56b3d743c3 331 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 22 319 2.6E-93 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS07845 51c034fdf965355d4ae5cc56b3d743c3 331 Gene3D G3DSA:3.10.290.10 26 73 6.2E-4 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS07845 51c034fdf965355d4ae5cc56b3d743c3 331 SUPERFAMILY SSF55120 84 321 3.7E-76 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS07845 51c034fdf965355d4ae5cc56b3d743c3 331 Pfam PF00849 RNA pseudouridylate synthase 99 248 1.9E-33 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS07845 51c034fdf965355d4ae5cc56b3d743c3 331 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 Gene3D G3DSA:3.40.50.720 285 467 2.9E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 Gene3D G3DSA:3.40.50.720 146 238 7.0E-10 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 Pfam PF13727 CoA-binding domain 68 242 1.6E-13 T 11-11-2016 ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 Gene3D G3DSA:3.90.25.10 468 547 3.6E-7 T 11-11-2016 ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 SUPERFAMILY SSF53335 112 332 1.16E-11 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 285 454 0.002 T 11-11-2016 ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 Pfam PF02719 Polysaccharide biosynthesis protein 287 569 2.4E-111 T 11-11-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ATY42_RS10645 964f393a79aa112e928dbc21a384cbca 635 SUPERFAMILY SSF51735 285 549 9.21E-58 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 14 388 2.3E-134 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 PIRSF PIRSF001434 3 392 9.3E-133 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 SUPERFAMILY SSF53383 19 389 2.45E-117 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 198 212 - T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 13 389 7.8E-178 T 11-11-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48 ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 Gene3D G3DSA:3.90.1150.10 256 391 1.7E-49 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS08830 06db98ca0561bb064c330a273bdd5393 405 Gene3D G3DSA:3.40.640.10 14 254 1.2E-84 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 SUPERFAMILY SSF53383 1 426 7.58E-128 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 Pfam PF00202 Aminotransferase class-III 36 397 2.1E-76 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 427 102.416 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 3.2E-187 T 11-11-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 Gene3D G3DSA:3.40.640.10 72 318 3.8E-80 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 Gene3D G3DSA:3.90.1150.10 321 426 4.6E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS06000 e2f62fb24b947f0e2cae6e8a361df7bc 429 Gene3D G3DSA:3.90.1150.10 2 71 4.6E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 39 113 2.6E-9 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 131 223 2.9E-20 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 Gene3D G3DSA:3.10.50.40 205 319 2.8E-48 T 11-11-2016 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 232 316 6.7E-25 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 Gene3D G3DSA:1.10.287.460 126 204 4.3E-18 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 Gene3D G3DSA:1.10.287.460 43 109 4.8E-20 T 11-11-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 ATY42_RS10035 96f706d40a9fb94f8ba7f5581669f4b1 321 SUPERFAMILY SSF54534 161 320 3.34E-51 T 11-11-2016 ATY42_RS17610 98615951f92bf13154a387754b825332 159 Pfam PF11745 Protein of unknown function (DUF3304) 17 119 4.1E-26 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS04430 7fcca159218294151a6d88ba6d5dc53e 211 Gene3D G3DSA:1.10.10.10 53 91 2.3E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 30 562 2.1E-126 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Gene3D G3DSA:3.40.50.620 117 446 9.2E-104 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Pfam PF00750 tRNA synthetases class I (R) 103 410 7.8E-24 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Gene3D G3DSA:3.30.1360.70 4 111 5.5E-30 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 SUPERFAMILY SSF55190 4 112 4.32E-26 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Gene3D G3DSA:1.10.730.10 447 562 3.3E-42 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 SUPERFAMILY SSF52374 117 452 1.35E-87 T 11-11-2016 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Hamap MF_00123 Arginine--tRNA ligase [argS]. 3 562 25.367 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 SUPERFAMILY SSF47323 436 562 9.16E-36 T 11-11-2016 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Pfam PF05746 DALR anticodon binding domain 441 562 8.1E-36 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 SMART SM01016 3 92 1.2E-36 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 131 140 - T 11-11-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 92 5.2E-24 T 11-11-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 160 173 1.9E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 136 152 1.9E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 136 1.9E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 PRINTS PR01038 Arginyl-tRNA synthetase signature 308 329 1.9E-22 T 11-11-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ATY42_RS02330 578d49746e01c9449a212ab21d6407cc 562 SMART SM00836 441 562 4.0E-56 T 11-11-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ATY42_RS06625 d2604a9d4aa0451d78837476384a96dd 150 Gene3D G3DSA:3.40.640.10 52 121 3.0E-6 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS16695 767b70b81d903a83f3a75bc63c3990bf 149 Pfam PF14539 Domain of unknown function (DUF4442) 5 143 5.2E-21 T 11-11-2016 IPR027961 Protein of unknown function DUF4442 ATY42_RS16695 767b70b81d903a83f3a75bc63c3990bf 149 Gene3D G3DSA:3.10.129.10 1 147 2.2E-42 T 11-11-2016 IPR029069 HotDog domain ATY42_RS16695 767b70b81d903a83f3a75bc63c3990bf 149 SUPERFAMILY SSF54637 10 148 3.39E-23 T 11-11-2016 IPR029069 HotDog domain ATY42_RS10730 424cd6eecd285b51594c108c8109bb25 100 Gene3D G3DSA:3.40.50.720 2 97 1.3E-19 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10730 424cd6eecd285b51594c108c8109bb25 100 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 95 4.2E-13 T 11-11-2016 ATY42_RS10730 424cd6eecd285b51594c108c8109bb25 100 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10730 424cd6eecd285b51594c108c8109bb25 100 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 60 80 1.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10730 424cd6eecd285b51594c108c8109bb25 100 SUPERFAMILY SSF51735 2 97 5.37E-18 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 225 3.9E-64 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 13 230 1.9E-66 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 4.0E-44 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 4.0E-44 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 4.0E-44 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 4.0E-44 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 9 244 18.273 T 11-11-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ATY42_RS22140 feb52692c3c8eab592cde3d8056dd085 251 ProSitePatterns PS01218 TatC family signature. 158 177 - T 11-11-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site ATY42_RS15245 406daa408059327f59d109adcbcc79a8 1152 SUPERFAMILY SSF52540 134 287 2.39E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15245 406daa408059327f59d109adcbcc79a8 1152 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 15 1152 0.0 T 11-11-2016 IPR017731 Type VI secretion system, IcmF ATY42_RS15245 406daa408059327f59d109adcbcc79a8 1152 Pfam PF06744 Type VI secretion protein IcmF C-terminal 908 1104 1.4E-44 T 11-11-2016 IPR010623 Type VI secretion system IcmF, C-terminal ATY42_RS15245 406daa408059327f59d109adcbcc79a8 1152 Pfam PF06761 Intracellular multiplication and human macrophage-killing 512 808 4.9E-57 T 11-11-2016 IPR009612 ImcF-related ATY42_RS15245 406daa408059327f59d109adcbcc79a8 1152 Gene3D G3DSA:3.40.50.300 134 275 5.8E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15245 406daa408059327f59d109adcbcc79a8 1152 Pfam PF14331 ImcF-related N-terminal domain 200 456 1.5E-88 T 11-11-2016 IPR025743 ImcF-related, N-terminal domain ATY42_RS08010 b89c6c09bd21e3938535e3b37ad64495 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 38.748 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 ATY42_RS08010 b89c6c09bd21e3938535e3b37ad64495 316 Pfam PF02401 LytB protein 3 284 7.9E-92 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 ATY42_RS08010 b89c6c09bd21e3938535e3b37ad64495 316 Gene3D G3DSA:3.40.50.720 43 120 7.1E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08010 b89c6c09bd21e3938535e3b37ad64495 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 1.5E-99 T 11-11-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 ATY42_RS06465 6456ffb204209f296aa091e262032b3b 527 SUPERFAMILY SSF51445 51 412 8.95E-91 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS06465 6456ffb204209f296aa091e262032b3b 527 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 330 520 6.5E-40 T 11-11-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 ATY42_RS06465 6456ffb204209f296aa091e262032b3b 527 SUPERFAMILY SSF51011 393 526 2.81E-27 T 11-11-2016 ATY42_RS06465 6456ffb204209f296aa091e262032b3b 527 Gene3D G3DSA:3.20.20.80 84 387 4.7E-12 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS06465 6456ffb204209f296aa091e262032b3b 527 SMART SM00813 330 520 3.0E-86 T 11-11-2016 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 SMART SM00944 13 151 8.1E-34 T 11-11-2016 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 Pfam PF00082 Subtilase family 250 467 9.0E-9 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 SUPERFAMILY SSF52743 185 520 1.11E-64 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 Gene3D G3DSA:3.40.50.200 186 520 2.1E-92 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 SUPERFAMILY SSF54897 3 162 1.28E-39 T 11-11-2016 IPR009020 Proteinase propeptide inhibitor ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 448 458 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site ATY42_RS15675 8bb647977b018aa28f17a28e7294e20d 523 Pfam PF09286 Pro-kumamolisin, activation domain 20 149 1.7E-16 T 11-11-2016 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 ATY42_RS11475 3a75cd52b2709a820df22b6a037c5557 239 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 16 228 5.0E-38 T 11-11-2016 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 ATY42_RS11475 3a75cd52b2709a820df22b6a037c5557 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 226 2.4E-43 T 11-11-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 ATY42_RS11475 3a75cd52b2709a820df22b6a037c5557 239 SUPERFAMILY SSF100950 10 230 4.55E-44 T 11-11-2016 ATY42_RS11475 3a75cd52b2709a820df22b6a037c5557 239 Gene3D G3DSA:3.40.50.1360 5 228 2.6E-42 T 11-11-2016 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Gene3D G3DSA:3.40.1190.10 94 315 1.0E-85 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Pfam PF08245 Mur ligase middle domain 109 294 2.2E-24 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 2 452 55.609 T 11-11-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Gene3D G3DSA:3.40.50.720 1 91 7.6E-33 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Pfam PF01225 Mur ligase family, catalytic domain 4 98 2.3E-14 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 SUPERFAMILY SSF51984 2 90 3.27E-18 T 11-11-2016 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 3 451 3.4E-186 T 11-11-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 SUPERFAMILY SSF53623 97 312 7.33E-53 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Gene3D G3DSA:3.90.190.20 316 451 2.3E-32 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 SUPERFAMILY SSF53244 314 450 5.36E-33 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS04625 8896532b5cb1bc116bbe35e599676080 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 387 1.0E-10 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS07020 29aa0e401dede060b92aeeeb8e117d8d 144 Pfam PF02566 OsmC-like protein 42 138 7.5E-22 T 11-11-2016 IPR003718 OsmC/Ohr family ATY42_RS07020 29aa0e401dede060b92aeeeb8e117d8d 144 SUPERFAMILY SSF82784 2 140 2.36E-37 T 11-11-2016 IPR003718 OsmC/Ohr family ATY42_RS07020 29aa0e401dede060b92aeeeb8e117d8d 144 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 3.8E-58 T 11-11-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 ATY42_RS07020 29aa0e401dede060b92aeeeb8e117d8d 144 Gene3D G3DSA:3.30.300.20 4 141 6.7E-49 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 SUPERFAMILY SSF81935 27 198 2.09E-63 T 11-11-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 543 1044 7.5E-213 T 11-11-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 83 196 1.4E-44 T 11-11-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 SUPERFAMILY SSF51730 199 544 4.32E-113 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 848 859 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Gene3D G3DSA:3.20.20.220 199 543 6.9E-105 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Gene3D G3DSA:1.10.2060.10 77 197 1.6E-49 T 11-11-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Pfam PF01619 Proline dehydrogenase 210 501 3.5E-91 T 11-11-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Gene3D G3DSA:1.20.5.550 27 76 2.9E-18 T 11-11-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Pfam PF00171 Aldehyde dehydrogenase family 589 1048 7.0E-115 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Gene3D G3DSA:3.40.309.10 836 1023 1.9E-41 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 PIRSF PIRSF000197 13 1062 0.0 T 11-11-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 Gene3D G3DSA:3.40.605.10 589 835 2.3E-71 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS20875 7f7056185517fce7787ffb296b1e011e 1066 SUPERFAMILY SSF53720 585 1051 3.01E-125 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 SUPERFAMILY SSF56349 125 321 2.03E-53 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 27 108 5.2E-16 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 25 323 53.915 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 Gene3D G3DSA:1.10.443.10 130 314 3.0E-53 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 23 323 62.531 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 SUPERFAMILY SSF47823 23 119 3.14E-32 T 11-11-2016 IPR010998 Integrase, Lambda-type, N-terminal ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 Pfam PF00589 Phage integrase family 131 308 1.3E-44 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 Gene3D G3DSA:1.10.150.130 26 118 1.4E-23 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal ATY42_RS04035 1e691e1434106693fc6b6a601add76dc 323 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 28 322 3.4E-112 T 11-11-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PIRSF PIRSF002133 1 124 7.2E-54 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 SUPERFAMILY SSF50249 3 123 5.31E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 8.7E-68 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 Pfam PF00164 Ribosomal protein S12/S23 5 123 3.9E-41 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.549 T 11-11-2016 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 Gene3D G3DSA:2.40.50.140 1 123 5.9E-64 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 6.2E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 6.2E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 6.2E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 6.2E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 6.2E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 6.2E-59 T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18070 a09ae44c6472ef6fda23e557910517a0 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-11-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS10065 b9dcbd2773ee93ee451590eec0c82868 436 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 25 421 6.5E-89 T 11-11-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 ATY42_RS10065 b9dcbd2773ee93ee451590eec0c82868 436 SUPERFAMILY SSF103473 23 424 5.49E-39 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS10065 b9dcbd2773ee93ee451590eec0c82868 436 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 104 420 1.4E-92 T 11-11-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 ATY42_RS10065 b9dcbd2773ee93ee451590eec0c82868 436 Gene3D G3DSA:1.20.1250.20 247 419 3.3E-7 T 11-11-2016 ATY42_RS10065 b9dcbd2773ee93ee451590eec0c82868 436 Gene3D G3DSA:1.20.1250.20 26 231 2.2E-19 T 11-11-2016 ATY42_RS10065 b9dcbd2773ee93ee451590eec0c82868 436 Pfam PF07690 Major Facilitator Superfamily 31 387 5.9E-21 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS14460 df0fe0cfc9ec1e2fe2e315ea68046f46 265 SUPERFAMILY SSF52096 5 259 4.81E-66 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS14460 df0fe0cfc9ec1e2fe2e315ea68046f46 265 Gene3D G3DSA:3.90.226.10 6 200 8.0E-54 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS14460 df0fe0cfc9ec1e2fe2e315ea68046f46 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 3.1E-48 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS14460 df0fe0cfc9ec1e2fe2e315ea68046f46 265 Gene3D G3DSA:1.10.12.10 204 260 1.2E-8 T 11-11-2016 IPR014748 Crontonase, C-terminal ATY42_RS13320 afbcdd38fba5bc344d2924289c6e005d 403 SUPERFAMILY SSF53098 20 367 1.06E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13320 afbcdd38fba5bc344d2924289c6e005d 403 Pfam PF13546 DDE superfamily endonuclease 1 255 4.4E-86 T 11-11-2016 ATY42_RS03100 cf4192fd63a9c8a9ebd63d710f85f0d1 126 Gene3D G3DSA:3.40.50.2300 7 121 1.8E-13 T 11-11-2016 ATY42_RS03100 cf4192fd63a9c8a9ebd63d710f85f0d1 126 SMART SM00448 9 117 0.0031 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03100 cf4192fd63a9c8a9ebd63d710f85f0d1 126 SUPERFAMILY SSF52172 7 121 3.7E-15 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 SUPERFAMILY SSF88946 9 86 4.71E-14 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 Gene3D G3DSA:1.10.10.10 101 156 2.8E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 Pfam PF04542 Sigma-70 region 2 10 73 2.8E-10 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 SUPERFAMILY SSF88659 97 156 5.67E-14 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 154 3.4E-19 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 Gene3D G3DSA:1.10.1740.10 9 75 1.2E-14 T 11-11-2016 ATY42_RS02080 8ffc4392cb67e2fbc0606d2348ee8541 171 Pfam PF08281 Sigma-70, region 4 102 153 1.8E-12 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 SUPERFAMILY SSF56935 276 467 7.94E-74 T 11-11-2016 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 SUPERFAMILY SSF56935 534 904 7.94E-74 T 11-11-2016 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 SUPERFAMILY SSF56935 26 238 7.94E-74 T 11-11-2016 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 165 2.6E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 Gene3D G3DSA:2.40.170.20 535 904 8.7E-63 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 Gene3D G3DSA:2.40.170.20 423 466 8.7E-63 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 Gene3D G3DSA:2.40.170.20 168 390 8.7E-63 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 Pfam PF00593 TonB dependent receptor 614 903 2.5E-25 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 Gene3D G3DSA:2.170.130.10 60 167 2.1E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS05750 de2e2c993f54f97f901b10604cb22c3e 904 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 34 903 1.8E-191 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 127 222 2.2E-26 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 341 360 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 129 141 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 SUPERFAMILY SSF47203 234 384 2.9E-47 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 Gene3D G3DSA:1.20.140.10 222 384 2.8E-65 T 11-11-2016 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 SUPERFAMILY SSF56645 5 245 6.28E-83 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 12 123 8.2E-34 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 PIRSF PIRSF016578 15 387 6.4E-13 T 11-11-2016 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 Gene3D G3DSA:1.10.540.10 4 124 1.5E-39 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 Gene3D G3DSA:2.40.110.10 126 221 1.2E-40 T 11-11-2016 ATY42_RS22000 65a360c3b8ab49425fd98682731d827e 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 382 3.0E-43 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS12550 63c73116171341ed35e12b09a63acc5d 286 Pfam PF13413 Helix-turn-helix domain 20 79 2.1E-20 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS12550 63c73116171341ed35e12b09a63acc5d 286 Pfam PF13464 Domain of unknown function (DUF4115) 202 274 2.2E-16 T 11-11-2016 IPR025194 Domain of unknown function DUF4115 ATY42_RS12550 63c73116171341ed35e12b09a63acc5d 286 Gene3D G3DSA:1.10.260.40 16 84 3.9E-8 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS02620 b87978a1c06e48d31337c61ee74f87c4 161 Pfam PF11906 Protein of unknown function (DUF3426) 16 160 9.4E-38 T 11-11-2016 IPR021834 Protein of unknown function DUF3426 ATY42_RS07080 a690d2843d3d3c92196114c47469549f 178 Gene3D G3DSA:2.40.50.140 1 122 5.7E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS07080 a690d2843d3d3c92196114c47469549f 178 Gene3D G3DSA:2.40.50.140 158 178 5.7E-50 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS07080 a690d2843d3d3c92196114c47469549f 178 SUPERFAMILY SSF50249 3 178 2.33E-56 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS07080 a690d2843d3d3c92196114c47469549f 178 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 35.554 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ATY42_RS07080 a690d2843d3d3c92196114c47469549f 178 Pfam PF00436 Single-strand binding protein family 5 108 2.8E-38 T 11-11-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ATY42_RS07080 a690d2843d3d3c92196114c47469549f 178 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 178 1.6E-49 T 11-11-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF50249 609 695 2.91E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF46915 225 327 8.11E-18 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF55666 144 234 6.45E-28 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SMART SM00322 553 618 3.8E-12 T 11-11-2016 IPR004087 K Homology domain GO:0003676 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF00013 KH domain 558 615 8.8E-10 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Gene3D G3DSA:3.30.230.70 316 542 3.2E-88 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Gene3D G3DSA:3.30.230.70 3 222 8.0E-80 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 320 2.5E-12 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF54211 4 143 2.48E-48 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 3.2E-18 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 5.3E-21 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Gene3D G3DSA:2.40.50.140 619 695 1.8E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF54211 305 493 4.15E-47 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF54791 553 630 2.43E-17 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SMART SM00316 621 691 4.9E-26 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF00575 S1 RNA binding domain 620 691 1.4E-20 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 694 30.401 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Gene3D G3DSA:1.10.10.400 226 315 6.0E-17 T 11-11-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 SUPERFAMILY SSF55666 451 550 9.96E-29 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 9 693 0.0 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 PIRSF PIRSF005499 1 704 7.8E-294 T 11-11-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Gene3D G3DSA:3.30.1370.10 552 618 7.6E-26 T 11-11-2016 IPR004088 K Homology domain, type 1 GO:0003723 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF03725 3' exoribonuclease family, domain 2 146 209 1.7E-9 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS16150 7f0aaf44fc2a6acc808da598cd82fbe9 704 Pfam PF03725 3' exoribonuclease family, domain 2 460 529 8.7E-7 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS10110 fe276623459b8724505563e88cf09fe6 481 SUPERFAMILY SSF52266 262 474 1.48E-47 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS10110 fe276623459b8724505563e88cf09fe6 481 SUPERFAMILY SSF52266 12 238 4.58E-39 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS10110 fe276623459b8724505563e88cf09fe6 481 Gene3D G3DSA:3.40.50.1110 264 474 6.4E-61 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS10110 fe276623459b8724505563e88cf09fe6 481 Gene3D G3DSA:3.40.50.1110 10 238 1.3E-57 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS10110 fe276623459b8724505563e88cf09fe6 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 48 224 1.6E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS10110 fe276623459b8724505563e88cf09fe6 481 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 291 467 2.9E-23 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 Pfam PF00771 FHIPEP family 439 635 4.8E-46 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 Pfam PF00771 FHIPEP family 27 433 1.6E-154 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 1.4E-49 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 233 247 1.4E-49 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 182 199 1.4E-49 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 133 149 1.4E-49 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 1.4E-49 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 152 170 1.4E-49 T 11-11-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ATY42_RS00470 c14c7654eb9db9162591830a9d078bad 645 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 138 161 - T 11-11-2016 IPR025505 FHIPEP conserved site ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 SUPERFAMILY SSF46785 4 88 9.98E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 Gene3D G3DSA:3.40.190.10 184 256 3.8E-8 T 11-11-2016 ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 Gene3D G3DSA:1.10.10.10 3 88 8.1E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.6E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 Gene3D G3DSA:3.40.190.10 95 183 7.8E-7 T 11-11-2016 ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 Pfam PF03466 LysR substrate binding domain 92 289 2.5E-22 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS14635 b48c5c230f3d1461f75e3703d55bf6ac 314 SUPERFAMILY SSF53850 90 290 1.35E-27 T 11-11-2016 ATY42_RS17365 dcb86653da80a0b8ca6ef84657b8f151 392 Pfam PF01420 Type I restriction modification DNA specificity domain 40 156 9.5E-8 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ATY42_RS17365 dcb86653da80a0b8ca6ef84657b8f151 392 SUPERFAMILY SSF116734 3 170 1.8E-28 T 11-11-2016 ATY42_RS17365 dcb86653da80a0b8ca6ef84657b8f151 392 SUPERFAMILY SSF116734 173 385 1.16E-30 T 11-11-2016 ATY42_RS20825 13ed41dc07cc3423e87fc7e22c5853a2 298 Pfam PF01040 UbiA prenyltransferase family 21 266 3.4E-55 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ATY42_RS20825 13ed41dc07cc3423e87fc7e22c5853a2 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 62 84 - T 11-11-2016 IPR030470 UbiA prenyltransferase conserved site ATY42_RS20825 13ed41dc07cc3423e87fc7e22c5853a2 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 6 291 1.3E-88 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ATY42_RS20825 13ed41dc07cc3423e87fc7e22c5853a2 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 4 292 19.413 T 11-11-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 Pfam PF13437 HlyD family secretion protein 254 360 2.9E-13 T 11-11-2016 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 Gene3D G3DSA:2.40.50.100 246 282 2.1E-11 T 11-11-2016 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 Gene3D G3DSA:2.40.50.100 55 90 2.1E-11 T 11-11-2016 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 70 90 5.1E-12 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 385 5.1E-12 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 265 286 5.1E-12 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 298 322 5.1E-12 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS17845 16c5e69630a66752627f9a1e43401b35 403 Pfam PF13533 Biotin-lipoyl like 61 91 1.3E-7 T 11-11-2016 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 1.1E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 1.1E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 1.1E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.1E-20 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 Gene3D G3DSA:3.40.50.620 3 210 6.9E-76 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 SUPERFAMILY SSF52374 4 332 1.49E-76 T 11-11-2016 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 Gene3D G3DSA:1.10.240.10 211 298 2.2E-25 T 11-11-2016 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 Pfam PF07411 Domain of unknown function (DUF1508) 361 402 1.4E-4 T 11-11-2016 IPR010879 Domain of unknown function DUF1508 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 332 2.9E-86 T 11-11-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 333 36.286 T 11-11-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 Pfam PF00579 tRNA synthetases class I (W and Y) 3 282 2.7E-55 T 11-11-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 Gene3D G3DSA:3.30.160.160 355 398 4.8E-4 T 11-11-2016 IPR010879 Domain of unknown function DUF1508 ATY42_RS02020 b83c92011369797328ac81df9e353a92 429 SUPERFAMILY SSF160113 353 403 1.23E-10 T 11-11-2016 IPR010879 Domain of unknown function DUF1508 ATY42_RS02015 5b126f0d9fd6f938cd95a9455dacb454 69 SUPERFAMILY SSF69047 1 66 1.7E-23 T 11-11-2016 IPR008462 CsbD-like ATY42_RS02015 5b126f0d9fd6f938cd95a9455dacb454 69 Gene3D G3DSA:1.10.1470.10 1 67 1.4E-25 T 11-11-2016 IPR008462 CsbD-like ATY42_RS02015 5b126f0d9fd6f938cd95a9455dacb454 69 Pfam PF05532 CsbD-like 4 55 1.7E-19 T 11-11-2016 IPR008462 CsbD-like ATY42_RS02015 5b126f0d9fd6f938cd95a9455dacb454 69 PIRSF PIRSF039008 1 66 5.4E-30 T 11-11-2016 IPR026042 Stress response protein YjbJ ATY42_RS19040 4767d0e8de963d9a4d2e189b28b18ed7 727 Pfam PF08306 Glycosyl hydrolase family 98 19 335 8.3E-117 T 11-11-2016 IPR013191 Glycosyl hydrolase family 98, central domain KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 ATY42_RS19040 4767d0e8de963d9a4d2e189b28b18ed7 727 Gene3D G3DSA:2.60.120.260 596 724 9.0E-17 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS19040 4767d0e8de963d9a4d2e189b28b18ed7 727 Pfam PF08307 Glycosyl hydrolase family 98 C-terminal domain 343 510 3.3E-8 T 11-11-2016 IPR013190 Glycosyl hydrolase family 98, C-terminal KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10 ATY42_RS19040 4767d0e8de963d9a4d2e189b28b18ed7 727 SUPERFAMILY SSF49785 597 722 2.34E-11 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS19040 4767d0e8de963d9a4d2e189b28b18ed7 727 Pfam PF16990 Carbohydrate binding module (family 35) 611 710 6.2E-7 T 11-11-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 ATY42_RS05355 565d1bb4cff3505eb7bfdc2f3bea9664 349 SUPERFAMILY SSF53850 36 310 7.41E-40 T 11-11-2016 ATY42_RS05355 565d1bb4cff3505eb7bfdc2f3bea9664 349 Gene3D G3DSA:3.40.190.10 142 286 5.3E-56 T 11-11-2016 ATY42_RS05355 565d1bb4cff3505eb7bfdc2f3bea9664 349 Pfam PF13531 Bacterial extracellular solute-binding protein 46 294 2.7E-18 T 11-11-2016 ATY42_RS05355 565d1bb4cff3505eb7bfdc2f3bea9664 349 Gene3D G3DSA:3.40.190.10 1 141 3.5E-28 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 470 2.6E-29 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 Gene3D G3DSA:3.50.50.60 238 410 4.6E-46 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 SUPERFAMILY SSF51971 146 410 1.41E-66 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 SUPERFAMILY SSF46548 7 158 7.85E-37 T 11-11-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 7.5E-29 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 PRINTS PR00419 Adrenodoxin reductase family signature 333 346 7.5E-29 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 7.5E-29 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 PRINTS PR00419 Adrenodoxin reductase family signature 299 313 7.5E-29 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 Gene3D G3DSA:1.10.1060.10 6 150 1.1E-41 T 11-11-2016 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 29 135 3.9E-36 T 11-11-2016 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 Gene3D G3DSA:3.40.50.720 151 237 1.9E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 Gene3D G3DSA:3.40.50.720 414 489 1.9E-32 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00780 5e5ab8254db421a541228dfed0124a71 493 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 7 483 4.8E-242 T 11-11-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 ATY42_RS09900 a0bfe787cc08645d3b740c39c81fefa7 200 SUPERFAMILY SSF54211 9 123 5.69E-38 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS09900 a0bfe787cc08645d3b740c39c81fefa7 200 Gene3D G3DSA:3.30.70.240 133 198 2.2E-13 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS09900 a0bfe787cc08645d3b740c39c81fefa7 200 Gene3D G3DSA:3.30.230.30 7 123 1.5E-44 T 11-11-2016 IPR001498 Impact, N-terminal ATY42_RS09900 a0bfe787cc08645d3b740c39c81fefa7 200 Pfam PF01205 Uncharacterized protein family UPF0029 19 119 3.2E-28 T 11-11-2016 IPR001498 Impact, N-terminal ATY42_RS09900 a0bfe787cc08645d3b740c39c81fefa7 200 Pfam PF09186 Domain of unknown function (DUF1949) 135 191 1.3E-8 T 11-11-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ATY42_RS09900 a0bfe787cc08645d3b740c39c81fefa7 200 SUPERFAMILY SSF54980 132 196 6.55E-10 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 16 360 5.4E-113 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 97 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 11 108 3.1E-18 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 Gene3D G3DSA:3.40.140.10 11 137 5.2E-33 T 11-11-2016 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 Gene3D G3DSA:3.40.430.10 138 364 3.3E-67 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 SUPERFAMILY SSF53927 12 153 7.79E-47 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 SUPERFAMILY SSF53597 154 362 2.1E-56 T 11-11-2016 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 Pfam PF01872 RibD C-terminal domain 156 359 8.3E-45 T 11-11-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 155 363 1.1E-53 T 11-11-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 ATY42_RS19415 015ed5c5da0e41b8ae0d77ba96488293 369 PIRSF PIRSF006769 8 367 1.5E-121 T 11-11-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 SUPERFAMILY SSF56300 1 269 3.92E-47 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 Pfam PF00149 Calcineurin-like phosphoesterase 1 164 9.8E-13 T 11-11-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 259 5.5E-77 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 PIRSF PIRSF000903 1 274 4.2E-118 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 Gene3D G3DSA:3.60.21.10 1 134 2.7E-49 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 Gene3D G3DSA:3.60.21.10 170 267 2.7E-49 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 PRINTS PR00114 Serine/threonine phosphatase family signature 32 59 5.6E-5 T 11-11-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 5.6E-5 T 11-11-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 PRINTS PR00114 Serine/threonine phosphatase family signature 176 192 5.6E-5 T 11-11-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 ATY42_RS18885 70ca3150fad1d20843413d363bd98f5a 318 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 44.828 T 11-11-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 ATY42_RS17785 7889ad42e7ca73832521ba6927b7483c 269 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 266 7.8E-110 T 11-11-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 ATY42_RS17785 7889ad42e7ca73832521ba6927b7483c 269 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 213 6.5E-32 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATY42_RS17785 7889ad42e7ca73832521ba6927b7483c 269 Gene3D G3DSA:3.40.50.300 3 246 4.0E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17785 7889ad42e7ca73832521ba6927b7483c 269 PIRSF PIRSF003092 1 269 3.7E-90 T 11-11-2016 IPR025501 ATP binding protein MinD ATY42_RS17785 7889ad42e7ca73832521ba6927b7483c 269 SUPERFAMILY SSF52540 4 267 1.82E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09240 fe090afda3e74a43ed3696ebd135ae8a 309 SUPERFAMILY SSF53098 2 308 9.1E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09240 fe090afda3e74a43ed3696ebd135ae8a 309 Pfam PF01609 Transposase DDE domain 72 308 8.5E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 49 246 3.3E-45 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 ProSitePatterns PS00761 Signal peptidases I signature 3. 209 222 - T 11-11-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 11-11-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 Gene3D G3DSA:2.10.109.10 204 249 1.3E-49 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 Gene3D G3DSA:2.10.109.10 60 137 1.3E-49 T 11-11-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 63 79 1.2E-22 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 204 223 1.2E-22 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 1.2E-22 T 11-11-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 Pfam PF00717 Peptidase S24-like 69 151 5.6E-22 T 11-11-2016 IPR019759 Peptidase S24/S26A/S26B ATY42_RS08980 13a4859b9a8c1d75f96333ce50686c3b 266 SUPERFAMILY SSF51306 61 250 2.56E-61 T 11-11-2016 IPR015927 Peptidase S24/S26A/S26B/S26C ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 Gene3D G3DSA:3.30.230.20 3 125 1.9E-45 T 11-11-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 Gene3D G3DSA:3.30.1700.10 128 282 3.6E-59 T 11-11-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 SUPERFAMILY SSF54211 133 277 9.86E-51 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 SUPERFAMILY SSF54211 3 125 2.28E-42 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3 294 7.8E-118 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.9E-105 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS19225 d752041f3032810049080d9fc0854a8d 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 45.883 T 11-11-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 ATY42_RS12650 c310f4d5435162859447fc21855e154e 250 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 39 224 2.0E-58 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 ATY42_RS12650 c310f4d5435162859447fc21855e154e 250 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 250 94.593 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 ATY42_RS12650 c310f4d5435162859447fc21855e154e 250 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 40 210 3.5E-69 T 11-11-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 ATY42_RS12650 c310f4d5435162859447fc21855e154e 250 SUPERFAMILY SSF55729 11 233 4.34E-86 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 280 3.1E-15 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 PIRSF PIRSF000103 1 292 9.9E-76 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 11-11-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 SUPERFAMILY SSF48179 165 283 5.99E-24 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 SUPERFAMILY SSF51735 1 160 5.91E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 7.1E-34 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 Gene3D G3DSA:1.10.1040.10 164 289 1.8E-27 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS21825 7f02d36455cfbd81af3335f329b5451b 292 Gene3D G3DSA:3.40.50.720 1 160 6.1E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 Gene3D G3DSA:1.10.287.950 445 649 5.6E-62 T 11-11-2016 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 451 480 7.7E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 555 7.7E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 605 634 7.7E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 557 586 7.7E-57 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 176 8.3E-13 T 11-11-2016 IPR024478 4HB MCP domain ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 SMART SM00304 206 258 4.2E-4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 SUPERFAMILY SSF58104 450 681 4.71E-71 T 11-11-2016 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 Pfam PF00672 HAMP domain 187 254 1.6E-11 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 483 676 1.2E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 SMART SM00283 430 677 3.9E-92 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14215 92163631f3dc5142e3abcfbecf1e74c3 691 SUPERFAMILY SSF158472 206 255 4.58E-8 T 11-11-2016 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 SMART SM00760 350 419 1.6E-39 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Pfam PF11638 DnaA N-terminal domain 1 62 7.9E-15 T 11-11-2016 IPR024633 DnaA N-terminal domain ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 SUPERFAMILY SSF52540 107 318 1.5E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 SUPERFAMILY SSF48295 339 441 1.62E-35 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 1 441 31.978 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 SMART SM00382 139 270 1.5E-4 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Gene3D G3DSA:3.40.50.300 101 271 3.4E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 4 440 1.2E-165 T 11-11-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Gene3D G3DSA:1.10.1750.10 341 441 6.2E-40 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Pfam PF00308 Bacterial dnaA protein 106 324 1.3E-84 T 11-11-2016 IPR013317 Chromosomal replication initiator protein DnaA ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 11-11-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Gene3D G3DSA:1.10.8.60 273 340 2.6E-27 T 11-11-2016 ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 186 4.0E-46 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 4.0E-46 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 140 160 4.0E-46 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 4.0E-46 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 238 265 4.0E-46 T 11-11-2016 IPR020591 Chromosomal replication control, initiator DnaA-like ATY42_RS00005 2bb88f68fc9e186afe53fbf27a718a43 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 353 419 7.1E-30 T 11-11-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ATY42_RS00135 467159e3cdb6730f0059be7cad4700c4 340 SUPERFAMILY SSF53613 2 329 6.08E-71 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS00135 467159e3cdb6730f0059be7cad4700c4 340 Pfam PF00294 pfkB family carbohydrate kinase 5 312 1.9E-34 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB ATY42_RS00135 467159e3cdb6730f0059be7cad4700c4 340 Gene3D G3DSA:3.40.1190.20 1 332 3.9E-77 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS09930 a0d248cfd1b3e3db36877723c6ef1fb4 499 SMART SM00558 112 241 8.8E-5 T 11-11-2016 IPR003347 JmjC domain ATY42_RS09930 a0d248cfd1b3e3db36877723c6ef1fb4 499 SUPERFAMILY SSF51197 22 314 8.79E-66 T 11-11-2016 ATY42_RS09930 a0d248cfd1b3e3db36877723c6ef1fb4 499 Pfam PF08007 Cupin superfamily protein 25 337 3.5E-100 T 11-11-2016 IPR003347 JmjC domain ATY42_RS09930 a0d248cfd1b3e3db36877723c6ef1fb4 499 Gene3D G3DSA:2.60.120.650 23 231 8.3E-38 T 11-11-2016 ATY42_RS03180 a10aa822887d2ebaeb9102f8c6255b94 331 SUPERFAMILY SSF51430 1 312 1.96E-101 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS03180 a10aa822887d2ebaeb9102f8c6255b94 331 Pfam PF00248 Aldo/keto reductase family 17 310 1.6E-74 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS03180 a10aa822887d2ebaeb9102f8c6255b94 331 Gene3D G3DSA:3.20.20.100 1 325 3.2E-119 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS19165 0544025d827c43c16b44ece542de288c 196 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 110 120 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site ATY42_RS19165 0544025d827c43c16b44ece542de288c 196 SUPERFAMILY SSF52743 21 191 3.53E-29 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS19165 0544025d827c43c16b44ece542de288c 196 Pfam PF00082 Subtilase family 77 180 1.8E-5 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS19165 0544025d827c43c16b44ece542de288c 196 Gene3D G3DSA:3.40.50.200 20 193 2.2E-34 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 SUPERFAMILY SSF103473 10 474 7.85E-69 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 Gene3D G3DSA:1.20.1250.20 26 212 1.2E-24 T 11-11-2016 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 Gene3D G3DSA:1.20.1250.20 268 472 1.4E-20 T 11-11-2016 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 PRINTS PR00171 Sugar transporter signature 401 413 1.5E-24 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 PRINTS PR00171 Sugar transporter signature 30 40 1.5E-24 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 PRINTS PR00171 Sugar transporter signature 113 132 1.5E-24 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 PRINTS PR00171 Sugar transporter signature 378 399 1.5E-24 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 PRINTS PR00171 Sugar transporter signature 281 291 1.5E-24 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 Pfam PF00083 Sugar (and other) transporter 24 474 6.5E-110 T 11-11-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 12 473 1.9E-110 T 11-11-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 ATY42_RS14505 fa4bc5fcecf93c3f629d998eea7d359d 475 ProSitePatterns PS00216 Sugar transport proteins signature 1. 325 342 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS13215 599b2b23579aaa9291d7c4147876a419 202 SUPERFAMILY SSF55729 12 184 8.14E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS13215 599b2b23579aaa9291d7c4147876a419 202 Gene3D G3DSA:3.40.630.30 8 196 2.2E-52 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS13215 599b2b23579aaa9291d7c4147876a419 202 Pfam PF13302 Acetyltransferase (GNAT) domain 22 159 3.2E-14 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS19090 630d9f5a8fd2182ace92b798a81c0721 403 Pfam PF13546 DDE superfamily endonuclease 1 255 8.4E-86 T 11-11-2016 ATY42_RS19090 630d9f5a8fd2182ace92b798a81c0721 403 SUPERFAMILY SSF53098 20 367 3.11E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09185 630d9f5a8fd2182ace92b798a81c0721 403 Pfam PF13546 DDE superfamily endonuclease 1 255 8.4E-86 T 11-11-2016 ATY42_RS09185 630d9f5a8fd2182ace92b798a81c0721 403 SUPERFAMILY SSF53098 20 367 3.11E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07145 d054df8c58791f29dd65c82be734e1e2 315 Pfam PF13503 Domain of unknown function (DUF4123) 61 156 3.6E-7 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 SMART SM00283 404 651 9.1E-95 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 SUPERFAMILY SSF158472 170 220 8.37E-7 T 11-11-2016 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 Gene3D G3DSA:1.10.287.950 419 623 5.2E-63 T 11-11-2016 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 SUPERFAMILY SSF58104 371 652 5.1E-72 T 11-11-2016 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 Pfam PF05227 CHASE3 domain 3 136 3.4E-31 T 11-11-2016 IPR007891 CHASE3 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 Pfam PF00672 HAMP domain 151 218 9.2E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 457 650 4.9E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 SMART SM00304 170 222 7.5E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 SMART SM00304 351 403 34.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 425 454 4.8E-58 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 531 560 4.8E-58 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 579 608 4.8E-58 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS14210 c622abd5b23a42dee65ff128e1495dff 703 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 502 529 4.8E-58 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS13455 767b148e267f7882373f1e6c4438f5f5 518 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 28 484 1.4E-133 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 ATY42_RS13455 767b148e267f7882373f1e6c4438f5f5 518 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 2 500 44.907 T 11-11-2016 IPR003846 Uncharacterised protein family UPF0061 ATY42_RS02640 1de86f83292d3e4d99c1aacb928518a3 313 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 304 2.6E-87 T 11-11-2016 ATY42_RS02640 1de86f83292d3e4d99c1aacb928518a3 313 PIRSF PIRSF000401 1 306 7.5E-90 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ATY42_RS02640 1de86f83292d3e4d99c1aacb928518a3 313 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 297 1.2E-62 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ATY42_RS02640 1de86f83292d3e4d99c1aacb928518a3 313 Gene3D G3DSA:3.40.50.150 120 298 3.1E-34 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02640 1de86f83292d3e4d99c1aacb928518a3 313 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 304 29.852 T 11-11-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ATY42_RS02640 1de86f83292d3e4d99c1aacb928518a3 313 SUPERFAMILY SSF53335 71 300 3.85E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 SUPERFAMILY SSF48371 466 866 9.92E-33 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 SUPERFAMILY SSF48371 317 517 2.59E-5 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 Gene3D G3DSA:1.25.10.10 793 1192 2.7E-16 T 11-11-2016 IPR011989 Armadillo-like helical ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 Gene3D G3DSA:1.25.10.10 380 783 6.3E-12 T 11-11-2016 IPR011989 Armadillo-like helical ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 Gene3D G3DSA:1.25.10.10 151 206 6.3E-12 T 11-11-2016 IPR011989 Armadillo-like helical ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 SUPERFAMILY SSF48371 858 1231 1.59E-27 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 Gene3D G3DSA:1.25.10.10 1220 1501 3.8E-4 T 11-11-2016 IPR011989 Armadillo-like helical ATY42_RS22120 35091166e8b41fde33545105700fc2ba 2927 SUPERFAMILY SSF48371 1222 1478 6.81E-14 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 ATY42_RS02790 e6127af324232d1aeb91bdc9ed25b9ca 380 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 71 288 5.8E-74 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 ATY42_RS02790 e6127af324232d1aeb91bdc9ed25b9ca 380 Pfam PF02481 DNA recombination-mediator protein A 73 280 2.8E-74 T 11-11-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 ATY42_RS02790 e6127af324232d1aeb91bdc9ed25b9ca 380 Gene3D G3DSA:3.40.50.450 115 277 7.1E-11 T 11-11-2016 ATY42_RS02790 e6127af324232d1aeb91bdc9ed25b9ca 380 SUPERFAMILY SSF102405 83 290 5.49E-39 T 11-11-2016 ATY42_RS23105 1aebf864d8849031cab8135a54bd3bee 1143 SUPERFAMILY SSF52540 916 1072 1.25E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23105 1aebf864d8849031cab8135a54bd3bee 1143 SUPERFAMILY SSF52540 42 72 1.25E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23105 1aebf864d8849031cab8135a54bd3bee 1143 Gene3D G3DSA:3.40.50.300 736 789 2.7E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23105 1aebf864d8849031cab8135a54bd3bee 1143 Pfam PF13555 P-loop containing region of AAA domain 23 82 3.7E-22 T 11-11-2016 ATY42_RS23105 1aebf864d8849031cab8135a54bd3bee 1143 Gene3D G3DSA:3.40.1140.10 19 243 2.2E-24 T 11-11-2016 ATY42_RS23105 1aebf864d8849031cab8135a54bd3bee 1143 Pfam PF13558 Putative exonuclease SbcCD, C subunit 972 1059 1.6E-20 T 11-11-2016 ATY42_RS23140 2ddf8627e1b43e9e4ce6c631095c5909 71 Pfam PF07869 Protein of unknown function (DUF1656) 23 60 8.4E-12 T 11-11-2016 IPR012451 Protein of unknown function DUF1656 ATY42_RS07040 9ed8858cb0a041b4311b69216e59ccb0 259 PIRSF PIRSF016184 32 259 5.1E-81 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS07040 9ed8858cb0a041b4311b69216e59ccb0 259 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 37 228 6.2E-34 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS07040 9ed8858cb0a041b4311b69216e59ccb0 259 SUPERFAMILY SSF54506 34 242 2.16E-41 T 11-11-2016 ATY42_RS07040 9ed8858cb0a041b4311b69216e59ccb0 259 Gene3D G3DSA:3.10.310.10 34 165 2.8E-34 T 11-11-2016 ATY42_RS07040 9ed8858cb0a041b4311b69216e59ccb0 259 Pfam PF02567 Phenazine biosynthesis-like protein 40 223 3.0E-32 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS07040 9ed8858cb0a041b4311b69216e59ccb0 259 Gene3D G3DSA:3.10.310.10 166 229 5.3E-6 T 11-11-2016 ATY42_RS12040 7171263418b8dcb07e9533b7aa789002 176 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 2 168 37.276 T 11-11-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 ATY42_RS12040 7171263418b8dcb07e9533b7aa789002 176 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 3 150 2.5E-76 T 11-11-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 ATY42_RS12040 7171263418b8dcb07e9533b7aa789002 176 Gene3D G3DSA:2.60.120.10 4 109 5.3E-20 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS12040 7171263418b8dcb07e9533b7aa789002 176 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 6 163 6.2E-79 T 11-11-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|Reactome: R-HSA-71240 ATY42_RS12040 7171263418b8dcb07e9533b7aa789002 176 SUPERFAMILY SSF51182 1 168 4.4E-57 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 TIGRFAM TIGR00337 PyrG: CTP synthase 4 538 1.3E-238 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 Gene3D G3DSA:3.40.50.880 290 543 4.1E-89 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 Hamap MF_01227 CTP synthase [pyrG]. 2 543 50.905 T 11-11-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 Gene3D G3DSA:3.40.50.300 4 285 7.1E-126 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 Pfam PF06418 CTP synthase N-terminus 5 265 7.4E-121 T 11-11-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 SUPERFAMILY SSF52317 290 542 2.21E-80 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 Pfam PF00117 Glutamine amidotransferase class-I 303 537 9.2E-55 T 11-11-2016 IPR017926 Glutamine amidotransferase ATY42_RS14825 c65f129796d9fb3f9c6b9c9c80f5edae 554 SUPERFAMILY SSF52540 2 266 2.72E-117 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS20460 ad7e01e0e0d69973f4e35c3302b2fbda 94 PIRSF PIRSF028784 4 94 6.9E-27 T 11-11-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ATY42_RS20460 ad7e01e0e0d69973f4e35c3302b2fbda 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 36 87 3.3E-19 T 11-11-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF47384 796 873 1.45E-17 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Gene3D G3DSA:2.120.10.30 138 250 8.0E-10 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Gene3D G3DSA:2.120.10.30 39 109 1.7E-4 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Pfam PF07494 Two component regulator propeller 174 196 3.3E-4 T 11-11-2016 IPR011110 Two component regulator propeller ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Gene3D G3DSA:3.30.565.10 858 1029 1.5E-43 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF63829 445 630 1.19E-13 T 11-11-2016 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SMART SM00388 807 872 4.0E-21 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF52172 1049 1167 1.11E-31 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Pfam PF00512 His Kinase A (phospho-acceptor) domain 807 872 5.5E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Pfam PF00072 Response regulator receiver domain 1053 1162 3.0E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 919 1030 3.4E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF63829 40 106 5.69E-10 T 11-11-2016 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF63829 149 264 5.69E-10 T 11-11-2016 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Gene3D G3DSA:1.10.287.130 802 857 1.9E-13 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SMART SM00387 919 1031 2.5E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Gene3D G3DSA:2.120.10.30 361 607 2.0E-12 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SMART SM00448 1051 1162 2.0E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Pfam PF07495 Y_Y_Y domain 691 751 2.3E-13 T 11-11-2016 IPR011123 Two component regulator three Y ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 Gene3D G3DSA:3.40.50.2300 1050 1168 3.4E-30 T 11-11-2016 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF55874 861 1029 1.31E-42 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 SUPERFAMILY SSF63829 300 475 2.22E-8 T 11-11-2016 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 955 969 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1015 1028 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 991 1009 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08870 c793adf13ea563ccd34731fde9fb4ed9 1185 PRINTS PR00344 Bacterial sensor protein C-terminal signature 973 983 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Gene3D G3DSA:2.40.30.10 270 350 5.7E-17 T 11-11-2016 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 SUPERFAMILY SSF52540 484 654 1.81E-35 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 53 457 1.8E-210 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 SUPERFAMILY SSF50447 267 355 8.94E-23 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 486 658 37.974 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Gene3D G3DSA:3.40.50.300 467 654 3.8E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 472 654 3.0E-77 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Gene3D G3DSA:3.40.50.300 44 260 1.8E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 PRINTS PR00315 GTP-binding elongation factor signature 151 162 5.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 PRINTS PR00315 GTP-binding elongation factor signature 54 67 5.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 PRINTS PR00315 GTP-binding elongation factor signature 115 123 5.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 PRINTS PR00315 GTP-binding elongation factor signature 135 145 5.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 PRINTS PR00315 GTP-binding elongation factor signature 188 197 5.3E-13 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Gene3D G3DSA:2.40.30.10 354 457 6.3E-8 T 11-11-2016 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 SUPERFAMILY SSF52540 45 259 6.51E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Pfam PF00009 Elongation factor Tu GTP binding domain 52 251 7.7E-41 T 11-11-2016 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 108 123 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Pfam PF01583 Adenylylsulphate kinase 489 641 4.1E-70 T 11-11-2016 ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 SUPERFAMILY SSF50465 356 457 6.47E-33 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ATY42_RS17005 d83d2a442c4b9656b0d9f0ff41f60ab0 658 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 44 487 51.988 T 11-11-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATY42_RS13565 7a325aa1e540f256e23ba4cac474102d 420 SUPERFAMILY SSF53474 34 159 3.33E-5 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13565 7a325aa1e540f256e23ba4cac474102d 420 Pfam PF06057 Bacterial virulence protein (VirJ) 218 408 7.3E-84 T 11-11-2016 IPR010333 Bacterial virulence ATY42_RS13565 7a325aa1e540f256e23ba4cac474102d 420 SUPERFAMILY SSF53474 213 405 8.11E-21 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS13565 7a325aa1e540f256e23ba4cac474102d 420 Gene3D G3DSA:3.40.50.1820 216 326 1.7E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21625 263dcb60c3e8ae956ba8d221b13b88fb 593 Pfam PF01103 Surface antigen 304 581 1.5E-32 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 ATY42_RS21625 263dcb60c3e8ae956ba8d221b13b88fb 593 Gene3D G3DSA:2.40.160.50 240 590 9.3E-17 T 11-11-2016 ATY42_RS21625 263dcb60c3e8ae956ba8d221b13b88fb 593 Pfam PF07244 Surface antigen variable number repeat 120 191 1.7E-5 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 SUPERFAMILY SSF52096 42 182 1.04E-15 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 SUPERFAMILY SSF52096 214 290 1.04E-15 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 358 547 5.2E-49 T 11-11-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 SUPERFAMILY SSF52096 477 537 4.26E-40 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 SUPERFAMILY SSF52096 330 448 4.26E-40 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 Gene3D G3DSA:3.90.226.10 222 320 7.8E-50 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 Gene3D G3DSA:3.90.226.10 36 178 7.8E-50 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 Gene3D G3DSA:3.90.226.10 332 440 4.5E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 Gene3D G3DSA:3.90.226.10 478 557 4.5E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 18 578 6.8E-163 T 11-11-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 PIRSF PIRSF001217 10 633 4.7E-210 T 11-11-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 Pfam PF01343 Peptidase family S49 142 293 3.1E-22 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ATY42_RS02740 23843322b3bb5d2e8f6720688416c15b 633 Pfam PF01343 Peptidase family S49 400 551 1.4E-46 T 11-11-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 Gene3D G3DSA:3.40.50.2020 3 162 1.8E-71 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 317 1.7E-115 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 Gene3D G3DSA:3.40.50.2020 163 292 1.6E-51 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 SUPERFAMILY SSF53271 72 307 5.81E-61 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 7 318 48.369 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 317 2.2E-30 T 11-11-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 123 3.9E-46 T 11-11-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 SMART SM01400 7 124 4.3E-68 T 11-11-2016 ATY42_RS18155 c0d5617d436c92cfa8e1280e19e2dbf6 319 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 11-11-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 249 425 1.9E-34 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.0E-27 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 Gene3D G3DSA:3.30.930.10 106 446 7.5E-139 T 11-11-2016 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 442 9.8E-158 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 SUPERFAMILY SSF55681 117 446 1.64E-98 T 11-11-2016 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 PIRSF PIRSF001529 1 449 5.8E-161 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 447 38.912 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 Gene3D G3DSA:1.10.287.40 1 105 1.2E-20 T 11-11-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 SUPERFAMILY SSF46589 1 113 3.56E-24 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 PRINTS PR00981 Seryl-tRNA synthetase signature 301 314 3.1E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 PRINTS PR00981 Seryl-tRNA synthetase signature 376 392 3.1E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 PRINTS PR00981 Seryl-tRNA synthetase signature 358 374 3.1E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 PRINTS PR00981 Seryl-tRNA synthetase signature 341 354 3.1E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS10285 a7245c54a079abc2427dd06ca68e5bee 449 PRINTS PR00981 Seryl-tRNA synthetase signature 289 301 3.1E-33 T 11-11-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ATY42_RS02735 82ce256cd446021daa50d4ebb99de219 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 427 3.2E-76 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS02735 82ce256cd446021daa50d4ebb99de219 458 Pfam PF01554 MatE 253 412 1.0E-28 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS02735 82ce256cd446021daa50d4ebb99de219 458 Pfam PF01554 MatE 27 185 1.5E-24 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.2E-42 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 SMART SM00938 4 105 2.2E-66 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 PRINTS PR00340 P-II protein signature 83 103 6.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 PRINTS PR00340 P-II protein signature 2 17 6.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 PRINTS PR00340 P-II protein signature 23 41 6.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 PRINTS PR00340 P-II protein signature 52 75 6.5E-43 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 PIRSF PIRSF039144 1 112 2.1E-53 T 11-11-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-11-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-11-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 SUPERFAMILY SSF54913 1 112 1.33E-45 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATY42_RS22545 fb6578bfa3f1600668514e70209f32c9 112 Gene3D G3DSA:3.30.70.120 1 112 2.9E-50 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATY42_RS07765 d132a515ac85032438627486b7617977 419 Pfam PF00482 Type II secretion system (T2SS), protein F 288 410 6.4E-29 T 11-11-2016 IPR018076 Type II secretion system F domain ATY42_RS07765 d132a515ac85032438627486b7617977 419 Pfam PF00482 Type II secretion system (T2SS), protein F 84 207 3.0E-31 T 11-11-2016 IPR018076 Type II secretion system F domain ATY42_RS07765 d132a515ac85032438627486b7617977 419 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 179 207 - T 11-11-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ATY42_RS07765 d132a515ac85032438627486b7617977 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 399 418 1.3E-17 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS07765 d132a515ac85032438627486b7617977 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 397 1.3E-17 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS07765 d132a515ac85032438627486b7617977 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 80 92 1.3E-17 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS07765 d132a515ac85032438627486b7617977 419 PRINTS PR00812 Bacterial general secretion pathway protein F signature 179 207 1.3E-17 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 Gene3D G3DSA:3.40.50.1100 188 399 1.3E-92 T 11-11-2016 ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 SUPERFAMILY SSF53686 13 398 2.23E-142 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 Gene3D G3DSA:3.40.50.1100 109 187 4.5E-20 T 11-11-2016 ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 91 105 - T 11-11-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 12 401 50.657 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 17 399 1.0E-185 T 11-11-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 64 388 4.1E-46 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS16345 dfc6f613d92d31bf9fb989a80076618c 405 PIRSF PIRSF001413 4 404 6.4E-155 T 11-11-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS15695 8cf056c13d7b37101855c85f513ef58b 79 SUPERFAMILY SSF51445 4 73 4.45E-9 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS15695 8cf056c13d7b37101855c85f513ef58b 79 Gene3D G3DSA:3.20.20.80 5 58 2.6E-6 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 Pfam PF01739 CheR methyltransferase, SAM binding domain 77 254 2.7E-51 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 SUPERFAMILY SSF47757 4 76 4.45E-18 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 61 1.0E-14 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PIRSF PIRSF000410 1 268 7.7E-89 T 11-11-2016 IPR026024 Chemotaxis protein methyltransferase CheR ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 Gene3D G3DSA:1.10.155.10 2 75 4.8E-22 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 SUPERFAMILY SSF53335 77 263 1.11E-49 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PRINTS PR00996 Glutamate methyltransferase family signature 105 125 3.1E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PRINTS PR00996 Glutamate methyltransferase family signature 70 82 3.1E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PRINTS PR00996 Glutamate methyltransferase family signature 31 44 3.1E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 3.1E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PRINTS PR00996 Glutamate methyltransferase family signature 208 222 3.1E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 PRINTS PR00996 Glutamate methyltransferase family signature 227 250 3.1E-36 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 SMART SM00138 9 268 2.4E-78 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS07250 ad4da8668f339b45fa97903b9d0e0a8e 268 Gene3D G3DSA:3.40.50.150 76 265 2.8E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 ProSitePatterns PS01270 Band 7 protein family signature. 135 163 - T 11-11-2016 IPR018080 Band 7/stomatin-like, conserved site ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 SUPERFAMILY SSF117892 53 186 3.79E-40 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 Pfam PF01145 SPFH domain / Band 7 family 25 194 2.1E-32 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 PRINTS PR00721 Stomatin signature 131 154 2.2E-32 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 PRINTS PR00721 Stomatin signature 174 195 2.2E-32 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 PRINTS PR00721 Stomatin signature 76 97 2.2E-32 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 PRINTS PR00721 Stomatin signature 155 173 2.2E-32 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 PRINTS PR00721 Stomatin signature 111 128 2.2E-32 T 11-11-2016 IPR001972 Stomatin family GO:0016020 ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 Pfam PF16200 C-terminal region of band_7 241 298 3.2E-8 T 11-11-2016 IPR032435 Band 7, C-terminal extension ATY42_RS08720 3e7bbae67be18d50dfe543bcc4c1c1a7 321 SMART SM00244 21 179 1.2E-52 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS15965 feb950448bb55f0f80b8fd2d007e7050 474 Pfam PF02706 Chain length determinant protein 25 195 1.5E-21 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 ATY42_RS15965 feb950448bb55f0f80b8fd2d007e7050 474 Pfam PF13807 G-rich domain on putative tyrosine kinase 389 462 1.1E-20 T 11-11-2016 IPR032807 Tyrosine kinase, G-rich domain ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 Gene3D G3DSA:1.10.260.40 350 378 5.1E-4 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 Pfam PF04552 Sigma-54, DNA binding domain 304 457 3.2E-57 T 11-11-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 437 444 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 Pfam PF04963 Sigma-54 factor, core binding domain 112 288 9.9E-32 T 11-11-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 456 9.5E-109 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 PIRSF PIRSF000774 1 459 8.2E-114 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 PRINTS PR00045 Sigma-54 factor signature 361 373 4.8E-27 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 PRINTS PR00045 Sigma-54 factor signature 432 450 4.8E-27 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 PRINTS PR00045 Sigma-54 factor signature 377 388 4.8E-27 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 PRINTS PR00045 Sigma-54 factor signature 173 190 4.8E-27 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 49 1.6E-12 T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS12825 20f435d1121c8301ef39d0a273fe84bf 467 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 349 368 - T 11-11-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ATY42_RS07895 997ceb23e0f2fd4bfa2890814a0d436f 358 Pfam PF14486 Domain of unknown function (DUF4432) 19 323 2.1E-99 T 11-11-2016 IPR027839 Protein of unknown function DUF4432 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 Gene3D G3DSA:2.60.120.260 472 601 2.7E-20 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 Pfam PF01301 Glycosyl hydrolases family 35 38 355 4.9E-120 T 11-11-2016 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 175 187 - T 11-11-2016 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 Gene3D G3DSA:3.20.20.80 35 359 2.1E-113 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PIRSF PIRSF006336 3 607 1.8E-178 T 11-11-2016 IPR026283 Beta-galactosidase 1-like GO:0004565 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 SUPERFAMILY SSF49785 469 594 3.4E-22 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 63 81 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 173 188 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 551 567 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 118 137 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 259 274 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 42 59 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 PRINTS PR00742 Glycosyl hydrolase family 35 signature 325 341 7.4E-47 T 11-11-2016 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS08575 42160ce7f687e31e27af0a789fecd26c 613 SUPERFAMILY SSF51445 33 357 4.16E-94 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00585 7ce39730a40c1525221221439cc7ac6b 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 120 1.3E-10 T 11-11-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 ATY42_RS00585 7ce39730a40c1525221221439cc7ac6b 295 Gene3D G3DSA:3.40.50.720 1 234 1.4E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00585 7ce39730a40c1525221221439cc7ac6b 295 SUPERFAMILY SSF51735 1 291 3.66E-41 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00585 7ce39730a40c1525221221439cc7ac6b 295 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 289 3.7E-101 T 11-11-2016 IPR010099 Epimerase family protein SDR39U1 ATY42_RS00585 7ce39730a40c1525221221439cc7ac6b 295 Pfam PF08338 Domain of unknown function (DUF1731) 247 292 3.0E-19 T 11-11-2016 IPR013549 Domain of unknown function DUF1731 ATY42_RS15595 a88e0ea1754f5b7afda118a0e1290414 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS15595 a88e0ea1754f5b7afda118a0e1290414 411 Pfam PF01610 Transposase 155 390 1.0E-62 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS02235 da89849b87ed6169b3080859e9559076 164 TIGRFAM TIGR01754 flav_RNR: putative ribonucleotide reductase-associated flavodoxin 1 144 8.9E-55 T 11-11-2016 IPR010088 Ribonucleotide reductase-associated flavodoxin, putative ATY42_RS02235 da89849b87ed6169b3080859e9559076 164 SUPERFAMILY SSF52218 1 146 1.49E-23 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS02235 da89849b87ed6169b3080859e9559076 164 Gene3D G3DSA:3.40.50.360 2 144 5.4E-23 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 122 133 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 SUPERFAMILY SSF52743 119 354 6.28E-44 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 Pfam PF00082 Subtilase family 122 352 4.7E-16 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 Gene3D G3DSA:3.40.50.200 104 354 1.3E-42 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 PRINTS PR00723 Subtilisin serine protease family (S8) signature 117 136 4.6E-8 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 PRINTS PR00723 Subtilisin serine protease family (S8) signature 301 317 4.6E-8 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS11630 0a9fd30a9360d97527bc3cb860b0073f 366 PRINTS PR00723 Subtilisin serine protease family (S8) signature 151 164 4.6E-8 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS19075 97307217b20b291625843ead555bf093 532 Gene3D G3DSA:3.40.50.1240 264 392 1.3E-36 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS19075 97307217b20b291625843ead555bf093 532 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 153 257 1.1E-8 T 11-11-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 ATY42_RS19075 97307217b20b291625843ead555bf093 532 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 154 168 - T 11-11-2016 IPR033379 Histidine acid phosphatase active site ATY42_RS19075 97307217b20b291625843ead555bf093 532 SUPERFAMILY SSF53254 150 526 2.36E-53 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS19075 97307217b20b291625843ead555bf093 532 Gene3D G3DSA:3.40.50.1240 152 263 1.2E-60 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS19075 97307217b20b291625843ead555bf093 532 Gene3D G3DSA:3.40.50.1240 395 529 1.2E-60 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS00350 7f1b68da58f046fed00220ba2433549e 542 SMART SM00267 370 541 1.6E-42 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS00350 7f1b68da58f046fed00220ba2433549e 542 SUPERFAMILY SSF55073 386 539 2.51E-42 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS00350 7f1b68da58f046fed00220ba2433549e 542 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 537 7.5E-35 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS00350 7f1b68da58f046fed00220ba2433549e 542 Gene3D G3DSA:3.30.70.270 383 539 2.9E-46 T 11-11-2016 ATY42_RS00350 7f1b68da58f046fed00220ba2433549e 542 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 383 540 2.7E-38 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 SUPERFAMILY SSF52096 28 288 5.29E-86 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 285 37.927 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 Pfam PF01039 Carboxyl transferase domain 110 243 5.7E-17 T 11-11-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 255 264 4.9E-42 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 204 221 4.9E-42 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 133 147 4.9E-42 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 233 244 4.9E-42 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 167 185 4.9E-42 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 287 2.5E-127 T 11-11-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS16330 4313cd2dad40b7ac26f3b7415006a07b 295 Gene3D G3DSA:3.90.226.10 21 288 9.1E-75 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS19205 0608e5e81c45302c316fe39821788413 122 Gene3D G3DSA:3.10.180.10 9 121 6.0E-28 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS19205 0608e5e81c45302c316fe39821788413 122 SUPERFAMILY SSF54593 11 121 3.09E-24 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS06510 549ea40792c4de542d3ea86ee843153f 85 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.35 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06510 549ea40792c4de542d3ea86ee843153f 85 Gene3D G3DSA:3.30.1320.10 1 79 7.7E-32 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06510 549ea40792c4de542d3ea86ee843153f 85 Pfam PF00886 Ribosomal protein S16 8 68 6.0E-24 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06510 549ea40792c4de542d3ea86ee843153f 85 SUPERFAMILY SSF54565 1 78 1.05E-28 T 11-11-2016 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06510 549ea40792c4de542d3ea86ee843153f 85 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-11-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS06510 549ea40792c4de542d3ea86ee843153f 85 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 8.6E-31 T 11-11-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18550 00fe45f8658702c210737aa85ec7cc77 658 Pfam PF05506 Domain of unknown function (DUF756) 492 561 8.0E-12 T 11-11-2016 IPR008475 Bacterial phospholipase C, C-terminal domain GO:0004629|GO:0016042 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 ATY42_RS18550 00fe45f8658702c210737aa85ec7cc77 658 SUPERFAMILY SSF53649 141 428 1.96E-6 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ATY42_RS18550 00fe45f8658702c210737aa85ec7cc77 658 Pfam PF04185 Phosphoesterase family 37 423 4.7E-103 T 11-11-2016 IPR007312 Phosphoesterase GO:0016788 ATY42_RS18550 00fe45f8658702c210737aa85ec7cc77 658 TIGRFAM TIGR03396 PC_PLC: phospholipase C, phosphocholine-specific 20 563 3.1E-219 T 11-11-2016 IPR017767 Bacterial phospholipase C, phosphocholine-specific GO:0034480 KEGG: 00562+3.1.4.3|KEGG: 00564+3.1.4.3|KEGG: 00565+3.1.4.3 ATY42_RS02935 8c008ed9c05281897b163d72bbb143e3 136 SUPERFAMILY SSF52980 3 131 2.2E-51 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS02935 8c008ed9c05281897b163d72bbb143e3 136 PIRSF PIRSF018267 1 136 8.8E-54 T 11-11-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ATY42_RS02935 8c008ed9c05281897b163d72bbb143e3 136 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.3E-56 T 11-11-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ATY42_RS02935 8c008ed9c05281897b163d72bbb143e3 136 Gene3D G3DSA:3.40.960.10 21 121 2.3E-48 T 11-11-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ATY42_RS02935 8c008ed9c05281897b163d72bbb143e3 136 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 7.7E-31 T 11-11-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 ATY42_RS20605 46314e5ef21a298c863b79731befd5f6 146 Pfam PF13202 EF hand 117 133 9.5E-6 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS20605 46314e5ef21a298c863b79731befd5f6 146 ProSitePatterns PS00018 EF-hand calcium-binding domain. 121 133 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS20605 46314e5ef21a298c863b79731befd5f6 146 Gene3D G3DSA:1.10.238.10 89 136 1.3E-8 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS20605 46314e5ef21a298c863b79731befd5f6 146 SUPERFAMILY SSF47473 89 136 6.15E-9 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS05740 e1e3316807c06196c0ed5ea158dce793 235 Pfam PF01551 Peptidase family M23 117 223 2.9E-22 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS05740 e1e3316807c06196c0ed5ea158dce793 235 Gene3D G3DSA:2.70.70.10 75 229 7.5E-33 T 11-11-2016 ATY42_RS05740 e1e3316807c06196c0ed5ea158dce793 235 SUPERFAMILY SSF51261 103 228 7.32E-31 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-11-2016 IPR014762 DNA mismatch repair, conserved site ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 Gene3D G3DSA:3.30.230.10 214 326 2.5E-38 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 SMART SM01340 209 327 1.5E-56 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 Gene3D G3DSA:3.30.565.10 2 202 3.4E-74 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 307 1.5E-96 T 11-11-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 9.6E-10 T 11-11-2016 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 SUPERFAMILY SSF55874 2 201 1.44E-53 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 621 29.138 T 11-11-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 SMART SM00853 438 581 2.1E-56 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 Pfam PF08676 MutL C terminal dimerisation domain 434 581 2.2E-49 T 11-11-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 SUPERFAMILY SSF54211 205 327 2.5E-35 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 211 326 1.8E-38 T 11-11-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 ATY42_RS13525 7bae5f87c47f232224a79197e087ed97 625 SUPERFAMILY SSF118116 434 623 7.19E-61 T 11-11-2016 ATY42_RS17215 ba41aec6f3762ae7308a935d15ebca11 299 Pfam PF01609 Transposase DDE domain 122 257 4.3E-10 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 SMART SM00388 176 240 3.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 286 394 1.3E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 SUPERFAMILY SSF55874 230 395 4.58E-38 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 SMART SM00387 285 397 2.1E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 SUPERFAMILY SSF158472 123 172 8.89E-6 T 11-11-2016 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 Pfam PF00512 His Kinase A (phospho-acceptor) domain 178 236 2.9E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 322 336 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 375 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 394 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 PRINTS PR00344 Bacterial sensor protein C-terminal signature 340 350 1.4E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 SMART SM00304 121 175 1.4E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 Gene3D G3DSA:3.30.565.10 226 395 6.0E-36 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 Pfam PF00672 HAMP domain 102 172 5.9E-10 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 SUPERFAMILY SSF47384 159 241 7.06E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07660 705787ee00bca75738dcf33ce4bb4aeb 397 Gene3D G3DSA:1.10.287.130 167 225 8.7E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS15260 22b8ee60ee1694808d0e28897d208284 463 SMART SM00240 32 81 3.9E-6 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATY42_RS15260 22b8ee60ee1694808d0e28897d208284 463 Pfam PF00498 FHA domain 34 97 1.4E-13 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATY42_RS15260 22b8ee60ee1694808d0e28897d208284 463 SUPERFAMILY SSF49879 25 104 2.3E-19 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 ATY42_RS15260 22b8ee60ee1694808d0e28897d208284 463 Gene3D G3DSA:2.60.200.20 30 99 9.0E-17 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATY42_RS15260 22b8ee60ee1694808d0e28897d208284 463 TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein 8 449 2.3E-128 T 11-11-2016 IPR017735 Type VI secretion system, FHA domain-containing protein ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Gene3D G3DSA:3.30.559.10 359 597 2.6E-86 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 156 185 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 SUPERFAMILY SSF51230 3 97 6.67E-23 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Gene3D G3DSA:2.40.50.100 134 209 1.3E-20 T 11-11-2016 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Gene3D G3DSA:2.40.50.100 6 81 5.0E-21 T 11-11-2016 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 SUPERFAMILY SSF47005 289 331 8.5E-11 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Pfam PF00364 Biotin-requiring enzyme 135 205 1.7E-20 T 11-11-2016 IPR000089 Biotin/lipoyl attachment ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Pfam PF00364 Biotin-requiring enzyme 9 77 1.8E-20 T 11-11-2016 IPR000089 Biotin/lipoyl attachment ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 SUPERFAMILY SSF51230 133 222 5.5E-22 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 SUPERFAMILY SSF52777 357 597 4.89E-84 T 11-11-2016 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Pfam PF02817 e3 binding domain 293 327 1.1E-13 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Gene3D G3DSA:4.10.320.10 289 336 9.5E-18 T 11-11-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 368 596 1.5E-80 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS03470 3a495e39f9f7329a1aa95a6ee2448c8b 597 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-11-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 Pfam PF00593 TonB dependent receptor 598 936 1.2E-21 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 Gene3D G3DSA:2.170.130.10 66 185 9.4E-34 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 SUPERFAMILY SSF56935 673 938 6.11E-79 T 11-11-2016 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 SUPERFAMILY SSF56935 485 640 6.11E-79 T 11-11-2016 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 SUPERFAMILY SSF56935 52 247 6.11E-79 T 11-11-2016 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 SUPERFAMILY SSF56935 312 442 6.11E-79 T 11-11-2016 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 Gene3D G3DSA:2.40.170.20 186 254 3.1E-65 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 Gene3D G3DSA:2.40.170.20 466 938 3.1E-65 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 Gene3D G3DSA:2.40.170.20 311 422 3.1E-65 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS15665 a1e850b3075b4112c46d747fadf7497b 938 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 182 7.2E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 221 256 4.5E-6 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 178 8.3E-4 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 136 3.6E-5 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 325 36.108 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 1.1E-23 T 11-11-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 Gene3D G3DSA:2.160.10.10 99 305 1.1E-43 T 11-11-2016 ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 328 1.4E-124 T 11-11-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 ATY42_RS09555 c2583cd2b424b10e501a2cc55a0ccb6d 337 SUPERFAMILY SSF51161 32 316 4.47E-78 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 Gene3D G3DSA:3.30.428.10 2 109 6.5E-36 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 Pfam PF01230 HIT domain 11 107 2.0E-24 T 11-11-2016 IPR001310 Histidine triad (HIT) protein ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 PRINTS PR00332 Histidine triad family signature 95 105 7.2E-20 T 11-11-2016 IPR001310 Histidine triad (HIT) protein ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 PRINTS PR00332 Histidine triad family signature 26 44 7.2E-20 T 11-11-2016 IPR001310 Histidine triad (HIT) protein ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 PRINTS PR00332 Histidine triad family signature 5 21 7.2E-20 T 11-11-2016 IPR001310 Histidine triad (HIT) protein ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-11-2016 IPR019808 Histidine triad, conserved site ATY42_RS05155 210e9ec034ebcc23353db7fd16f2e4f4 116 SUPERFAMILY SSF54197 2 109 2.69E-34 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 ATY42_RS15925 1a44697a9196b0da04fb69a020b0cb39 398 SUPERFAMILY SSF53756 82 370 5.08E-10 T 11-11-2016 ATY42_RS10615 7e8bf2aba8c84965dd6a34469b402022 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 218 1.6E-69 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 ATY42_RS10615 7e8bf2aba8c84965dd6a34469b402022 227 Pfam PF02224 Cytidylate kinase 9 219 4.4E-69 T 11-11-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 ATY42_RS10615 7e8bf2aba8c84965dd6a34469b402022 227 SUPERFAMILY SSF52540 7 221 2.22E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS10615 7e8bf2aba8c84965dd6a34469b402022 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 225 33.158 T 11-11-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 ATY42_RS10615 7e8bf2aba8c84965dd6a34469b402022 227 Gene3D G3DSA:3.40.50.300 6 221 1.7E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 Gene3D G3DSA:3.40.50.720 170 290 1.9E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 Pfam PF00107 Zinc-binding dehydrogenase 176 304 1.9E-26 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 SUPERFAMILY SSF51735 138 310 1.73E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 1.5E-29 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 SMART SM00829 11 343 3.0E-7 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 Gene3D G3DSA:3.90.180.10 1 169 2.4E-55 T 11-11-2016 IPR011032 GroES-like ATY42_RS07545 2b264d2a7ab4d44f71ab544cc5198c2a 346 SUPERFAMILY SSF50129 1 167 2.93E-48 T 11-11-2016 IPR011032 GroES-like ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 Gene3D G3DSA:3.40.50.720 11 121 9.8E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 328 7.8E-37 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 Gene3D G3DSA:3.30.70.260 326 412 5.9E-24 T 11-11-2016 ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 Gene3D G3DSA:3.40.50.720 122 299 1.0E-61 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 296 1.6E-50 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 SUPERFAMILY SSF51735 110 297 7.9E-56 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 SUPERFAMILY SSF52283 10 137 4.04E-47 T 11-11-2016 ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 202 224 - T 11-11-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 SUPERFAMILY SSF55021 334 412 8.4E-15 T 11-11-2016 ATY42_RS10420 41bbd5c6e144cc53363f38f5f3505848 413 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 156 183 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ATY42_RS07555 7849d012147a50d760f02e7a086ea772 432 Gene3D G3DSA:3.40.720.10 13 330 3.8E-69 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ATY42_RS07555 7849d012147a50d760f02e7a086ea772 432 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 48 366 6.1E-69 T 11-11-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 ATY42_RS07555 7849d012147a50d760f02e7a086ea772 432 SUPERFAMILY SSF53649 39 406 1.8E-78 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ATY42_RS10180 31168d2952c5df50cfabced53ac530cb 60 Pfam PF00313 'Cold-shock' DNA-binding domain 5 58 7.1E-7 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS10180 31168d2952c5df50cfabced53ac530cb 60 PIRSF PIRSF002599 1 60 2.2E-9 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 ATY42_RS10180 31168d2952c5df50cfabced53ac530cb 60 Gene3D G3DSA:2.40.50.140 2 57 2.9E-13 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10180 31168d2952c5df50cfabced53ac530cb 60 SUPERFAMILY SSF50249 1 58 4.16E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS04060 920d5dedede93db7e80e2036c4c075e4 318 Gene3D G3DSA:3.30.420.10 165 307 1.1E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04060 920d5dedede93db7e80e2036c4c075e4 318 Pfam PF13936 Helix-turn-helix domain 3 45 3.0E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS04060 920d5dedede93db7e80e2036c4c075e4 318 SUPERFAMILY SSF53098 165 308 3.95E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04060 920d5dedede93db7e80e2036c4c075e4 318 Pfam PF00665 Integrase core domain 175 267 3.1E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Gene3D G3DSA:1.20.272.10 255 353 2.7E-41 T 11-11-2016 ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 62 170 5.2E-14 T 11-11-2016 IPR003959 ATPase, AAA-type, core GO:0005524 ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 SUPERFAMILY SSF52540 22 242 9.85E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Pfam PF12002 MgsA AAA+ ATPase C terminal 275 440 3.3E-62 T 11-11-2016 IPR021886 MgsA AAA+ ATPase C-terminal ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Gene3D G3DSA:3.40.50.300 23 161 1.8E-31 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Gene3D G3DSA:1.10.8.60 162 246 3.5E-14 T 11-11-2016 ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Gene3D G3DSA:1.10.3710.10 355 451 3.4E-31 T 11-11-2016 ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 Pfam PF16193 AAA C-terminal domain 196 273 1.1E-21 T 11-11-2016 IPR032423 AAA ATPase, C-terminal domain ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 SUPERFAMILY SSF48019 258 440 5.44E-69 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ATY42_RS12605 fbe6592ddabfe315fb139f06e53e7862 458 SMART SM00382 58 174 9.7E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS19560 a03054887f64a49571836f25ef6250b3 265 Pfam PF00034 Cytochrome c 164 244 1.6E-9 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS19560 a03054887f64a49571836f25ef6250b3 265 Pfam PF00034 Cytochrome c 54 132 1.9E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS19560 a03054887f64a49571836f25ef6250b3 265 Gene3D G3DSA:1.10.760.10 159 245 9.0E-26 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS19560 a03054887f64a49571836f25ef6250b3 265 SUPERFAMILY SSF46626 149 247 4.65E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS19560 a03054887f64a49571836f25ef6250b3 265 SUPERFAMILY SSF46626 61 133 7.13E-18 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS19560 a03054887f64a49571836f25ef6250b3 265 Gene3D G3DSA:1.10.760.10 51 132 1.1E-23 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 PIRSF PIRSF000188 1 351 1.0E-148 T 11-11-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 SUPERFAMILY SSF51735 141 344 7.29E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 SUPERFAMILY SSF53223 3 143 2.78E-46 T 11-11-2016 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 Gene3D G3DSA:3.40.50.720 147 335 3.9E-48 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 Gene3D G3DSA:3.40.192.10 2 146 1.7E-62 T 11-11-2016 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 298 5.9E-11 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 5.4E-17 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 285 296 5.4E-17 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 5.4E-17 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 5.4E-17 T 11-11-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 SMART SM00839 143 350 2.1E-74 T 11-11-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 12 127 3.1E-26 T 11-11-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-70614 ATY42_RS09140 1d7511f69ddec55a01bc30f47bff4606 366 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 11-11-2016 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-70614 ATY42_RS07715 3c4120f36a13bc5241935990a6735002 339 Pfam PF05598 Transposase domain (DUF772) 62 136 1.7E-21 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07715 3c4120f36a13bc5241935990a6735002 339 Pfam PF01609 Transposase DDE domain 148 291 2.6E-22 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS17410 90ac423e3d126e46b4803b22c2023567 498 SUPERFAMILY SSF116734 6 222 8.67E-34 T 11-11-2016 ATY42_RS17410 90ac423e3d126e46b4803b22c2023567 498 SUPERFAMILY SSF116734 265 471 3.92E-34 T 11-11-2016 ATY42_RS17410 90ac423e3d126e46b4803b22c2023567 498 Pfam PF01420 Type I restriction modification DNA specificity domain 269 430 3.6E-14 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ATY42_RS17410 90ac423e3d126e46b4803b22c2023567 498 Pfam PF01420 Type I restriction modification DNA specificity domain 64 193 3.9E-10 T 11-11-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 ATY42_RS11570 22f29550027f0631261c41b0894b15be 133 Pfam PF13358 DDE superfamily endonuclease 6 91 1.2E-18 T 11-11-2016 ATY42_RS11570 22f29550027f0631261c41b0894b15be 133 Gene3D G3DSA:3.30.420.10 4 106 1.5E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11570 22f29550027f0631261c41b0894b15be 133 SUPERFAMILY SSF53098 6 107 9.48E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 Gene3D G3DSA:2.120.10.30 30 93 3.7E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 Gene3D G3DSA:2.120.10.30 166 293 3.7E-5 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 Pfam PF00326 Prolyl oligopeptidase family 435 644 3.1E-41 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 Gene3D G3DSA:3.40.50.1820 329 643 1.5E-69 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 SUPERFAMILY SSF82171 334 381 2.88E-10 T 11-11-2016 ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 SUPERFAMILY SSF82171 29 288 2.88E-10 T 11-11-2016 ATY42_RS20335 7d03d0655c85ba98de23609f5adf6316 648 SUPERFAMILY SSF53474 391 643 1.74E-64 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Gene3D G3DSA:3.40.50.10490 444 609 1.2E-64 T 11-11-2016 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Gene3D G3DSA:3.60.20.10 2 233 2.5E-77 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 SUPERFAMILY SSF53697 244 609 5.47E-109 T 11-11-2016 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Pfam PF01380 SIS domain 463 591 3.3E-26 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Pfam PF01380 SIS domain 290 416 5.8E-28 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Pfam PF13522 Glutamine amidotransferase domain 60 191 1.1E-22 T 11-11-2016 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Gene3D G3DSA:3.40.50.10490 243 443 6.4E-68 T 11-11-2016 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 SUPERFAMILY SSF56235 2 233 3.0E-71 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.316 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ATY42_RS03595 339e386912307d7a7ce00b03eaf84b21 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.1E-259 T 11-11-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 Pfam PF03167 Uracil DNA glycosylase superfamily 61 214 3.7E-24 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 227 39.19 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 Gene3D G3DSA:3.40.470.10 5 228 5.5E-96 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 219 3.3E-77 T 11-11-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 SMART SM00986 56 216 1.0E-40 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 SMART SM00987 56 216 1.0E-40 T 11-11-2016 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 64 73 - T 11-11-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS21575 b00a41faf5f717fc91ede48e143732c4 241 SUPERFAMILY SSF52141 9 228 3.05E-89 T 11-11-2016 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ATY42_RS23005 a8360f1b909f122c04c80ca59779a5b8 217 Pfam PF01609 Transposase DDE domain 40 175 2.1E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS18580 694fd2005cd7d82f90182b3766d23447 286 SUPERFAMILY SSF161098 24 274 4.32E-55 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS18580 694fd2005cd7d82f90182b3766d23447 286 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 17 279 1.2E-125 T 11-11-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 ATY42_RS18580 694fd2005cd7d82f90182b3766d23447 286 Gene3D G3DSA:1.10.3720.10 26 279 3.4E-49 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS18580 694fd2005cd7d82f90182b3766d23447 286 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 14 277 1.8E-97 T 11-11-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ATY42_RS18580 694fd2005cd7d82f90182b3766d23447 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 278 6.6E-25 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 SUPERFAMILY SSF55931 122 456 4.22E-98 T 11-11-2016 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 Pfam PF00120 Glutamine synthetase, catalytic domain 122 455 2.5E-95 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 Gene3D G3DSA:3.10.20.70 20 123 4.5E-9 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 SUPERFAMILY SSF54368 22 118 2.35E-12 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 Gene3D G3DSA:3.30.590.10 124 445 1.9E-89 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATY42_RS13805 e820349c1fb471e16fb4d393a72c751f 459 SMART SM01230 121 378 1.8E-100 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS05630 38958bf9cadadd895adae70c49bbbf4d 460 SUPERFAMILY SSF53098 39 424 1.21E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05630 38958bf9cadadd895adae70c49bbbf4d 460 Pfam PF13546 DDE superfamily endonuclease 39 312 6.5E-91 T 11-11-2016 ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 Pfam PF07687 Peptidase dimerisation domain 164 271 2.3E-14 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 Gene3D G3DSA:3.30.70.360 176 272 2.0E-11 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 SUPERFAMILY SSF55031 166 272 2.09E-10 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 Pfam PF01546 Peptidase family M20/M25/M40 68 362 2.0E-19 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 SUPERFAMILY SSF53187 5 166 1.32E-34 T 11-11-2016 ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 SUPERFAMILY SSF53187 288 362 1.32E-34 T 11-11-2016 ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 Gene3D G3DSA:3.40.630.10 307 363 8.0E-43 T 11-11-2016 ATY42_RS13225 b61a4af415b15f0aab3d3241a74e60a1 366 Gene3D G3DSA:3.40.630.10 7 175 8.0E-43 T 11-11-2016 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 Gene3D G3DSA:1.20.1250.20 233 437 2.4E-5 T 11-11-2016 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 Gene3D G3DSA:3.40.1130.10 455 627 1.8E-16 T 11-11-2016 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 Pfam PF07690 Major Facilitator Superfamily 43 386 2.3E-17 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 Pfam PF01553 Acyltransferase 462 582 7.9E-23 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 SUPERFAMILY SSF69593 429 587 5.1E-27 T 11-11-2016 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 SMART SM00563 469 585 2.0E-25 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 SUPERFAMILY SSF103473 12 438 1.13E-24 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS02540 bd5941f62e26602d671687a4c025e2ba 640 Gene3D G3DSA:1.20.1250.20 17 188 3.1E-10 T 11-11-2016 ATY42_RS10685 34e661779eb42bdd59445afda426f4b4 106 Pfam PF06844 Protein of unknown function (DUF1244) 34 99 4.3E-37 T 11-11-2016 IPR023163 SMc04008-like domain ATY42_RS10685 34e661779eb42bdd59445afda426f4b4 106 Gene3D G3DSA:1.10.3340.10 6 91 1.6E-40 T 11-11-2016 IPR023163 SMc04008-like domain ATY42_RS10685 34e661779eb42bdd59445afda426f4b4 106 SUPERFAMILY SSF158757 9 84 1.28E-33 T 11-11-2016 IPR023163 SMc04008-like domain ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 PRINTS PR01576 Peptide deformylase signature 123 152 2.0E-38 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 PRINTS PR01576 Peptide deformylase signature 104 122 2.0E-38 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 PRINTS PR01576 Peptide deformylase signature 36 65 2.0E-38 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 PRINTS PR01576 Peptide deformylase signature 92 103 2.0E-38 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 Pfam PF01327 Polypeptide deformylase 5 155 8.2E-53 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 Gene3D G3DSA:3.90.45.10 4 167 1.4E-65 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 PIRSF PIRSF004749 1 170 1.1E-57 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 SUPERFAMILY SSF56420 3 167 3.14E-62 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 Hamap MF_00163 Peptide deformylase [def]. 2 165 30.961 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS02800 132277d758d346c7ecf0f4ff12dabaa0 170 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 162 5.1E-53 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS01020 e5c2d39dd31884e0edb7c52c5decbc43 294 Pfam PF08241 Methyltransferase domain 51 147 3.1E-19 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ATY42_RS01020 e5c2d39dd31884e0edb7c52c5decbc43 294 SUPERFAMILY SSF53335 10 215 1.33E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS01020 e5c2d39dd31884e0edb7c52c5decbc43 294 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 5 265 29.99 T 11-11-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 ATY42_RS01020 e5c2d39dd31884e0edb7c52c5decbc43 294 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 13 264 9.3E-72 T 11-11-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 ATY42_RS01020 e5c2d39dd31884e0edb7c52c5decbc43 294 Gene3D G3DSA:3.40.50.150 39 266 2.2E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS04020 327c99e1cbe6d87f273d646f4684e009 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 348 1.4E-70 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 ATY42_RS04020 327c99e1cbe6d87f273d646f4684e009 360 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 4 349 1.6E-112 T 11-11-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 ATY42_RS03230 313b56ce1680df3ea246a5cf285d5d83 545 PRINTS PR01084 Na+/H+ exchanger signature 119 129 4.2E-5 T 11-11-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 ATY42_RS03230 313b56ce1680df3ea246a5cf285d5d83 545 PRINTS PR01084 Na+/H+ exchanger signature 69 83 4.2E-5 T 11-11-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 ATY42_RS03230 313b56ce1680df3ea246a5cf285d5d83 545 PRINTS PR01084 Na+/H+ exchanger signature 55 66 4.2E-5 T 11-11-2016 IPR004709 Na+/H+ exchanger GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 Reactome: R-HSA-425986 ATY42_RS03230 313b56ce1680df3ea246a5cf285d5d83 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 8 540 1.5E-123 T 11-11-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 ATY42_RS03230 313b56ce1680df3ea246a5cf285d5d83 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 419 7.9E-66 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ATY42_RS16820 416530a838bedc3386ef030435f74128 130 SMART SM00528 75 118 5.0E-8 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ATY42_RS16820 416530a838bedc3386ef030435f74128 130 Pfam PF00816 H-NS histone family 16 108 8.9E-18 T 11-11-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 ATY42_RS16820 416530a838bedc3386ef030435f74128 130 Gene3D G3DSA:4.10.430.10 91 107 2.1E-5 T 11-11-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 ATY42_RS16820 416530a838bedc3386ef030435f74128 130 SUPERFAMILY SSF81273 80 108 3.45E-6 T 11-11-2016 ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 Gene3D G3DSA:3.40.50.720 182 293 1.4E-25 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 144 1.3E-26 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 SUPERFAMILY SSF51735 151 313 2.02E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 179 207 - T 11-11-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 Gene3D G3DSA:3.90.180.10 2 181 2.3E-61 T 11-11-2016 IPR011032 GroES-like ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 11-11-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 SUPERFAMILY SSF50129 9 172 5.17E-47 T 11-11-2016 IPR011032 GroES-like ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 Pfam PF00107 Zinc-binding dehydrogenase 186 309 4.8E-25 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS01225 3bad77ee670d01f8f93ee0e8fb4da97d 352 SMART SM00829 11 343 1.4E-5 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 Gene3D G3DSA:3.40.50.1220 189 311 9.2E-58 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 PIRSF PIRSF000089 1 313 3.7E-103 T 11-11-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 SMART SM00893 4 186 1.4E-38 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 Gene3D G3DSA:3.40.50.620 1 183 4.6E-45 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 SUPERFAMILY SSF52467 191 312 1.47E-46 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 Pfam PF01012 Electron transfer flavoprotein domain 4 174 4.1E-32 T 11-11-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 194 276 5.2E-35 T 11-11-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 257 283 - T 11-11-2016 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ATY42_RS03815 552b6a714155d9ca593c88f019e59a3c 313 SUPERFAMILY SSF52402 3 181 1.88E-42 T 11-11-2016 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 301 8.6E-90 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 11-11-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 Gene3D G3DSA:3.10.25.10 206 301 4.3E-29 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 SUPERFAMILY SSF50486 204 304 3.53E-30 T 11-11-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 Gene3D G3DSA:3.40.50.170 1 204 9.2E-69 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 Pfam PF00551 Formyl transferase 1 176 3.7E-41 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 SUPERFAMILY SSF53328 1 206 8.24E-61 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 303 35.53 T 11-11-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ATY42_RS02805 b4509b84cefd8eaeffc39b2f6296cf78 307 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 1.2E-26 T 11-11-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 Gene3D G3DSA:1.10.10.60 127 183 2.7E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 SMART SM00342 146 228 4.1E-23 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 SMART SM00091 7 75 1.5E-4 T 11-11-2016 IPR000014 PAS domain ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 Gene3D G3DSA:3.30.450.20 8 118 2.5E-15 T 11-11-2016 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 Gene3D G3DSA:1.10.10.60 184 229 2.0E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 Pfam PF08448 PAS fold 13 119 4.3E-22 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 183 224 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 SUPERFAMILY SSF46689 182 229 1.79E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 Pfam PF12833 Helix-turn-helix domain 153 229 1.1E-22 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 SUPERFAMILY SSF46689 129 177 2.06E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 SUPERFAMILY SSF55785 9 118 7.33E-15 T 11-11-2016 IPR000014 PAS domain ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 4.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ATY42_RS17185 755c41a144e3e48eb5096e42cb9e7278 241 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 4.2E-7 T 11-11-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ATY42_RS01390 90af58686de08d0ff68a477c66e12d3a 220 Gene3D G3DSA:3.10.450.50 36 80 1.7E-20 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS01390 90af58686de08d0ff68a477c66e12d3a 220 Gene3D G3DSA:3.10.450.50 125 180 1.7E-20 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS01390 90af58686de08d0ff68a477c66e12d3a 220 Gene3D G3DSA:1.10.10.640 181 212 9.2E-9 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical ATY42_RS01390 90af58686de08d0ff68a477c66e12d3a 220 Gene3D G3DSA:1.10.10.640 82 121 9.2E-9 T 11-11-2016 IPR023094 Toluene tolerance protein, alpha-helical ATY42_RS01390 90af58686de08d0ff68a477c66e12d3a 220 Pfam PF05494 MlaC protein 45 206 1.2E-39 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ATY42_RS01390 90af58686de08d0ff68a477c66e12d3a 220 PIRSF PIRSF004649 9 219 8.9E-57 T 11-11-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC ATY42_RS12830 25ec4f3c577d5748143da1ea4035029c 126 SUPERFAMILY SSF52172 1 117 6.26E-27 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS12830 25ec4f3c577d5748143da1ea4035029c 126 Pfam PF00072 Response regulator receiver domain 6 114 2.1E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS12830 25ec4f3c577d5748143da1ea4035029c 126 Gene3D G3DSA:3.40.50.2300 2 121 1.8E-27 T 11-11-2016 ATY42_RS12830 25ec4f3c577d5748143da1ea4035029c 126 SMART SM00448 4 117 1.7E-20 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS04165 c617bde9565a2a2ae52f378a881b2a8a 279 Gene3D G3DSA:3.90.550.10 9 248 3.3E-35 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS04165 c617bde9565a2a2ae52f378a881b2a8a 279 Pfam PF00535 Glycosyl transferase family 2 8 130 1.6E-19 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS04165 c617bde9565a2a2ae52f378a881b2a8a 279 SUPERFAMILY SSF53448 5 250 6.44E-44 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS04745 3094b7b080241853e4fde0511dba655f 271 Pfam PF12762 ISXO2-like transposase domain 148 270 9.6E-22 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04745 3094b7b080241853e4fde0511dba655f 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS04745 3094b7b080241853e4fde0511dba655f 271 SMART SM01126 148 270 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02610 3094b7b080241853e4fde0511dba655f 271 Pfam PF12762 ISXO2-like transposase domain 148 270 9.6E-22 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02610 3094b7b080241853e4fde0511dba655f 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS02610 3094b7b080241853e4fde0511dba655f 271 SMART SM01126 148 270 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04785 f59d8f3f3cf421d958c486909fb1d5e4 87 SUPERFAMILY SSF46689 2 66 3.76E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04785 f59d8f3f3cf421d958c486909fb1d5e4 87 Pfam PF01527 Transposase 2 70 1.4E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS04785 f59d8f3f3cf421d958c486909fb1d5e4 87 Gene3D G3DSA:1.10.10.60 8 83 1.1E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS07285 18490f36d8eb460eb92c6024e912ec57 180 SUPERFAMILY SSF55729 19 165 4.25E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS07285 18490f36d8eb460eb92c6024e912ec57 180 Pfam PF00583 Acetyltransferase (GNAT) family 87 161 7.0E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS07285 18490f36d8eb460eb92c6024e912ec57 180 Gene3D G3DSA:3.40.630.30 15 175 6.8E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 Pfam PF13638 PIN domain 8 158 2.2E-39 T 11-11-2016 IPR002716 PIN domain ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 SUPERFAMILY SSF88723 108 157 6.28E-11 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 SUPERFAMILY SSF88723 7 67 6.28E-11 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 SMART SM00670 6 145 1.4E-11 T 11-11-2016 IPR002716 PIN domain ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 Gene3D G3DSA:3.40.50.1010 8 66 5.4E-9 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 Gene3D G3DSA:3.40.50.1010 108 161 5.4E-9 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 SUPERFAMILY SSF52540 252 444 3.97E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 SUPERFAMILY SSF52540 134 189 3.97E-29 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 Pfam PF02562 PhoH-like protein 253 454 2.1E-54 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 ATY42_RS14595 e2263a1ae4768bc9c0a48d33de4d07dd 465 Gene3D G3DSA:3.40.50.300 250 464 6.9E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11655 41744a25b18c56d1794d4e795f4caf8e 104 Pfam PF14542 GCN5-related N-acetyl-transferase 26 102 2.9E-27 T 11-11-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase ATY42_RS11655 41744a25b18c56d1794d4e795f4caf8e 104 SUPERFAMILY SSF55729 17 103 9.17E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS11655 41744a25b18c56d1794d4e795f4caf8e 104 Gene3D G3DSA:3.40.630.30 16 104 2.4E-33 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS20840 cad4b1ff8e6643602d97edb68ee91f26 239 Pfam PF02104 SURF1 family 16 220 4.4E-20 T 11-11-2016 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 22 79 7.9E-21 T 11-11-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Gene3D G3DSA:3.40.50.980 77 265 7.4E-41 T 11-11-2016 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Pfam PF00501 AMP-binding enzyme 81 521 1.6E-89 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Gene3D G3DSA:3.30.300.30 517 637 1.6E-28 T 11-11-2016 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Gene3D G3DSA:3.40.50.980 266 423 1.5E-29 T 11-11-2016 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 644 52.653 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 642 0.0 T 11-11-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: R-HSA-71384 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 530 608 1.6E-25 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 SUPERFAMILY SSF56801 15 641 3.92E-182 T 11-11-2016 ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 11-11-2016 IPR020845 AMP-binding, conserved site ATY42_RS22835 98c2d25794d94a4691a8248e54d81343 647 Gene3D G3DSA:2.30.38.10 439 514 1.0E-6 T 11-11-2016 ATY42_RS14455 4763ed0dd66bc8a2123abea5122a774c 82 Pfam PF04023 FeoA domain 1 76 1.8E-17 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ATY42_RS14455 4763ed0dd66bc8a2123abea5122a774c 82 SMART SM00899 1 77 1.6E-17 T 11-11-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 ATY42_RS14455 4763ed0dd66bc8a2123abea5122a774c 82 SUPERFAMILY SSF50037 3 77 5.49E-14 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal ATY42_RS12225 4417bbaa3d69e7fe28d92749ab38705f 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 310 1.7E-14 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS12225 4417bbaa3d69e7fe28d92749ab38705f 324 SUPERFAMILY SSF161098 33 311 3.79E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS12225 4417bbaa3d69e7fe28d92749ab38705f 324 Gene3D G3DSA:1.10.3720.10 25 322 6.4E-38 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS12225 4417bbaa3d69e7fe28d92749ab38705f 324 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 317 8.9E-91 T 11-11-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 ATY42_RS18905 a98dbddc92b6e26298370c807f3856a3 296 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 280 19.523 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 ATY42_RS18905 a98dbddc92b6e26298370c807f3856a3 296 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 139 151 - T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 ATY42_RS18905 a98dbddc92b6e26298370c807f3856a3 296 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 277 5.6E-75 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 ATY42_RS18905 a98dbddc92b6e26298370c807f3856a3 296 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 274 1.7E-75 T 11-11-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 ATY42_RS22925 736103d8ae83993b3358d78c0da2690c 167 Pfam PF04909 Amidohydrolase 18 156 3.3E-25 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS22925 736103d8ae83993b3358d78c0da2690c 167 Gene3D G3DSA:3.20.20.140 11 163 1.2E-40 T 11-11-2016 ATY42_RS22925 736103d8ae83993b3358d78c0da2690c 167 SUPERFAMILY SSF51556 18 161 1.81E-39 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Gene3D G3DSA:2.40.50.100 601 670 1.3E-22 T 11-11-2016 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Pfam PF02785 Biotin carboxylase C-terminal domain 349 457 4.7E-36 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Pfam PF00289 Biotin carboxylase, N-terminal domain 15 123 8.4E-46 T 11-11-2016 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Gene3D G3DSA:3.30.470.20 216 461 1.3E-99 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 SUPERFAMILY SSF52440 12 126 3.96E-50 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 299 306 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Gene3D G3DSA:3.40.50.20 15 141 2.0E-54 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 166 180 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 SUPERFAMILY SSF51230 596 669 1.44E-19 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Pfam PF00364 Biotin-requiring enzyme 605 669 7.2E-14 T 11-11-2016 IPR000089 Biotin/lipoyl attachment ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Gene3D G3DSA:3.30.1490.20 142 215 5.5E-28 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 335 1.1E-73 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 SUPERFAMILY SSF56059 96 356 1.7E-68 T 11-11-2016 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 SUPERFAMILY SSF51246 344 461 1.36E-36 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 627 644 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS21990 c98fecadca6d35c0c3e5bfbd2f642230 675 SMART SM00878 349 456 8.2E-54 T 11-11-2016 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS21405 4803d7697f72770802f9c842a9a7b319 139 Gene3D G3DSA:3.30.750.24 12 115 6.8E-23 T 11-11-2016 IPR002645 STAS domain ATY42_RS21405 4803d7697f72770802f9c842a9a7b319 139 Pfam PF13466 STAS domain 20 95 6.6E-11 T 11-11-2016 IPR002645 STAS domain ATY42_RS21405 4803d7697f72770802f9c842a9a7b319 139 SUPERFAMILY SSF52091 13 110 1.47E-18 T 11-11-2016 IPR002645 STAS domain ATY42_RS09590 336544785e18215d20bac23f6a6d3dc8 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 9.1E-99 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ATY42_RS09590 336544785e18215d20bac23f6a6d3dc8 240 SUPERFAMILY SSF53633 5 236 1.7E-72 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS09590 336544785e18215d20bac23f6a6d3dc8 240 PIRSF PIRSF005650 1 240 2.0E-94 T 11-11-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 ATY42_RS09590 336544785e18215d20bac23f6a6d3dc8 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 45.245 T 11-11-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ATY42_RS09590 336544785e18215d20bac23f6a6d3dc8 240 Pfam PF00696 Amino acid kinase family 8 215 4.4E-29 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS09590 336544785e18215d20bac23f6a6d3dc8 240 Gene3D G3DSA:3.40.1160.10 3 237 3.7E-85 T 11-11-2016 IPR001048 Aspartate/glutamate/uridylate kinase ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 Gene3D G3DSA:3.60.120.10 14 487 1.3E-173 T 11-11-2016 IPR005801 ADC synthase GO:0009058 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 170 2.9E-29 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 PRINTS PR00095 Anthranilate synthase component I signature 324 337 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 PRINTS PR00095 Anthranilate synthase component I signature 433 447 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 PRINTS PR00095 Anthranilate synthase component I signature 338 351 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 PRINTS PR00095 Anthranilate synthase component I signature 418 432 1.3E-22 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 27 484 8.0E-166 T 11-11-2016 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 SUPERFAMILY SSF56322 16 484 8.5E-156 T 11-11-2016 IPR005801 ADC synthase GO:0009058 ATY42_RS20375 29113dc42b05a03bedfabfef73fe407f 491 Pfam PF00425 chorismate binding enzyme 223 476 1.9E-97 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal ATY42_RS06255 1341fa56ab6c910be0219228fb92c11b 265 Pfam PF00326 Prolyl oligopeptidase family 119 246 7.5E-10 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS06255 1341fa56ab6c910be0219228fb92c11b 265 SUPERFAMILY SSF53474 41 260 1.63E-34 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS06255 1341fa56ab6c910be0219228fb92c11b 265 Gene3D G3DSA:3.40.50.1820 4 262 2.8E-40 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS17955 0dacc20df937a2d529e099010a9daee5 63 Gene3D G3DSA:3.30.1390.20 7 63 2.8E-23 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ATY42_RS17955 0dacc20df937a2d529e099010a9daee5 63 Pfam PF00327 Ribosomal protein L30p/L7e 10 59 1.4E-12 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ATY42_RS17955 0dacc20df937a2d529e099010a9daee5 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 9 63 5.2E-19 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 ATY42_RS17955 0dacc20df937a2d529e099010a9daee5 63 SUPERFAMILY SSF55129 7 63 7.06E-17 T 11-11-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ATY42_RS17955 0dacc20df937a2d529e099010a9daee5 63 PIRSF PIRSF002211 1 63 6.5E-24 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 ATY42_RS17955 0dacc20df937a2d529e099010a9daee5 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 6 63 18.681 T 11-11-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 ATY42_RS07570 adbb6aa1b19de13015ce06318092d8e5 281 SUPERFAMILY SSF52096 98 191 4.97E-8 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 2.2E-14 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 2.2E-14 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 2.2E-14 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 SUPERFAMILY SSF51230 86 160 3.66E-23 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 11-11-2016 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 Gene3D G3DSA:2.40.50.100 85 160 7.2E-30 T 11-11-2016 ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 160 1.5E-51 T 11-11-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ATY42_RS02665 44476bce30257841317a7a7f28d433e2 161 Pfam PF00364 Biotin-requiring enzyme 87 160 1.8E-21 T 11-11-2016 IPR000089 Biotin/lipoyl attachment ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 166 194 - T 11-11-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 275 396 5.8E-26 T 11-11-2016 IPR018076 Type II secretion system F domain ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.8E-30 T 11-11-2016 IPR018076 Type II secretion system F domain ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 2.8E-22 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 2.8E-22 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 2.8E-22 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS04080 b492008eee401b4dd34910ce21036cf5 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 2.8E-22 T 11-11-2016 IPR003004 GspF/PilC family ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Pfam PF00889 Elongation factor TS 70 272 5.2E-65 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Gene3D G3DSA:1.10.8.10 1 54 2.3E-28 T 11-11-2016 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Gene3D G3DSA:1.10.286.20 191 235 1.2E-10 T 11-11-2016 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 SUPERFAMILY SSF54713 149 289 3.92E-46 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 SUPERFAMILY SSF46934 1 55 2.01E-19 T 11-11-2016 IPR009060 UBA-like GO:0005515 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Gene3D G3DSA:3.30.479.20 150 185 1.9E-28 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Gene3D G3DSA:3.30.479.20 236 271 1.9E-28 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Gene3D G3DSA:3.30.479.20 56 145 4.3E-15 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-11-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 289 2.6E-99 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 SUPERFAMILY SSF54713 55 144 2.13E-20 T 11-11-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS09600 ebd19f8a0c5c1d010eaf8e1f769887c9 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 289 74.705 T 11-11-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ATY42_RS13080 d05d9c8d3dfe31226386d5f9567d78a5 130 Pfam PF00034 Cytochrome c 59 130 1.3E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS13080 d05d9c8d3dfe31226386d5f9567d78a5 130 Gene3D G3DSA:1.10.760.10 39 130 1.2E-21 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS13080 d05d9c8d3dfe31226386d5f9567d78a5 130 SUPERFAMILY SSF46626 30 130 3.35E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 SUPERFAMILY SSF56349 5 291 2.3E-55 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 2 298 58.966 T 11-11-2016 IPR023009 Tyrosine recombinase XerC/XerD ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 4 96 2.7E-18 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 Gene3D G3DSA:1.10.150.130 4 107 1.4E-27 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 300 6.2E-110 T 11-11-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 Pfam PF00589 Phage integrase family 119 284 1.3E-46 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS20055 42fdec0e997ce484406ac67717d375db 305 Gene3D G3DSA:1.10.443.10 115 297 1.1E-52 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 Gene3D G3DSA:1.20.144.10 43 257 1.1E-51 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 PIRSF PIRSF000897 9 276 9.8E-117 T 11-11-2016 IPR011158 Nonspecific acid phosphatase, class A GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 SMART SM00014 124 238 7.0E-17 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 SUPERFAMILY SSF48317 45 257 6.02E-48 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 201 225 7.2E-38 T 11-11-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 143 161 7.2E-38 T 11-11-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 79 98 7.2E-38 T 11-11-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 235 253 7.2E-38 T 11-11-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 PRINTS PR00483 Bacterial acid phosphatase class A signature 169 195 7.2E-38 T 11-11-2016 IPR001011 Acid phosphatase, class A, bacterial GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 ProSitePatterns PS01157 Class A bacterial acid phosphatases signature. 173 180 - T 11-11-2016 IPR018296 Acid phosphatase, class A, bacterial, conserved site GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 ATY42_RS23275 f565811b83b0984ba29489568750eb42 285 Pfam PF01569 PAP2 superfamily 136 238 4.2E-17 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 SUPERFAMILY SSF55594 163 242 4.32E-20 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 144 6.1E-27 T 11-11-2016 IPR002178 PTS EIIA type-2 domain ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 173 180 - T 11-11-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR00107 Phosphocarrier protein signature 173 189 1.7E-14 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR00107 Phosphocarrier protein signature 198 213 1.7E-14 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR00107 Phosphocarrier protein signature 213 230 1.7E-14 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 199 214 - T 11-11-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 SUPERFAMILY SSF51621 524 815 1.02E-98 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 SUPERFAMILY SSF47831 311 410 6.02E-23 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Pfam PF00381 PTS HPr component phosphorylation site 164 238 7.7E-19 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Gene3D G3DSA:3.50.30.10 402 523 2.0E-33 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 713 731 - T 11-11-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Gene3D G3DSA:3.30.1340.10 163 241 3.4E-23 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 522 806 7.4E-107 T 11-11-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 455 466 - T 11-11-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 SUPERFAMILY SSF55804 10 145 4.71E-32 T 11-11-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Pfam PF05524 PEP-utilising enzyme, N-terminal 277 395 1.4E-19 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Gene3D G3DSA:3.40.930.10 10 146 9.7E-33 T 11-11-2016 IPR002178 PTS EIIA type-2 domain ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 564 583 6.1E-21 T 11-11-2016 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 713 728 6.1E-21 T 11-11-2016 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 766 778 6.1E-21 T 11-11-2016 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 730 745 6.1E-21 T 11-11-2016 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Gene3D G3DSA:1.10.274.10 311 401 1.9E-26 T 11-11-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 275 830 1.5E-144 T 11-11-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Gene3D G3DSA:3.20.20.60 526 832 7.6E-103 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 164 239 5.1E-17 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 Pfam PF00391 PEP-utilising enzyme, mobile domain 425 496 9.5E-20 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-11-2016 IPR002178 PTS EIIA type-2 domain ATY42_RS13925 2c53a96dd34bfb983a52cbf6e6826635 838 SUPERFAMILY SSF52009 395 516 2.88E-28 T 11-11-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ATY42_RS10400 6c571644a7ec41ed0518c1625ce19965 225 SMART SM01007 20 208 5.8E-47 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal ATY42_RS10400 6c571644a7ec41ed0518c1625ce19965 225 SUPERFAMILY SSF53639 16 220 4.71E-44 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal ATY42_RS10400 6c571644a7ec41ed0518c1625ce19965 225 Gene3D G3DSA:3.40.225.10 17 220 1.4E-43 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal ATY42_RS10400 6c571644a7ec41ed0518c1625ce19965 225 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 22 207 1.3E-38 T 11-11-2016 IPR001303 Class II aldolase/adducin N-terminal ATY42_RS10400 6c571644a7ec41ed0518c1625ce19965 225 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 22 212 7.9E-72 T 11-11-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 ATY42_RS10400 6c571644a7ec41ed0518c1625ce19965 225 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 216 105.795 T 11-11-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|Reactome: R-HSA-1237112 ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 SMART SM00448 112 225 2.4E-28 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 SUPERFAMILY SSF141868 416 640 2.75E-35 T 11-11-2016 IPR001633 EAL domain ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 Gene3D G3DSA:3.20.20.450 416 641 3.6E-35 T 11-11-2016 IPR001633 EAL domain ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 SMART SM00267 237 402 3.0E-5 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 386 5.7E-6 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 Gene3D G3DSA:3.30.70.270 250 394 2.8E-12 T 11-11-2016 ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 SUPERFAMILY SSF52172 110 236 1.42E-32 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 SMART SM00052 406 648 1.0E-10 T 11-11-2016 IPR001633 EAL domain ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 Gene3D G3DSA:3.40.50.2300 109 236 3.0E-31 T 11-11-2016 ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 Pfam PF00072 Response regulator receiver domain 114 225 3.5E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 Pfam PF00563 EAL domain 416 640 3.3E-36 T 11-11-2016 IPR001633 EAL domain ATY42_RS02470 ab78d709bd5eb34b5747ae807790020c 656 SUPERFAMILY SSF55073 252 395 8.63E-11 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS11870 a766fe8b8215cf44703568cf70cf3979 269 SUPERFAMILY SSF49879 115 215 1.02E-17 T 11-11-2016 IPR008984 SMAD/FHA domain GO:0005515 ATY42_RS11870 a766fe8b8215cf44703568cf70cf3979 269 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 125 198 7.9E-16 T 11-11-2016 IPR032030 YscD, cytoplasmic domain ATY42_RS11870 a766fe8b8215cf44703568cf70cf3979 269 SMART SM00240 137 187 3.9E-6 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATY42_RS11870 a766fe8b8215cf44703568cf70cf3979 269 Gene3D G3DSA:2.60.200.20 117 208 2.7E-18 T 11-11-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 Pfam PF13288 DXP reductoisomerase C-terminal domain 267 383 2.0E-37 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 PIRSF PIRSF006205 6 395 6.0E-143 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 9 137 2.4E-38 T 11-11-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 SUPERFAMILY SSF51735 7 155 2.12E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 Gene3D G3DSA:1.10.1740.10 310 389 6.9E-29 T 11-11-2016 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 9 388 45.084 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 151 235 1.7E-38 T 11-11-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 SUPERFAMILY SSF69055 299 388 1.11E-29 T 11-11-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 Gene3D G3DSA:3.40.50.720 6 155 2.5E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 SUPERFAMILY SSF55347 131 270 6.54E-58 T 11-11-2016 ATY42_RS09570 d50f5f978c961560995b95b14b4263ed 396 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 7 389 1.9E-133 T 11-11-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 ATY42_RS10670 96eeda5a29f6f19765684bd5b8e5213c 134 Gene3D G3DSA:3.40.50.720 1 65 1.3E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10670 96eeda5a29f6f19765684bd5b8e5213c 134 SUPERFAMILY SSF51735 1 63 1.38E-7 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 3 121 3.5E-39 T 11-11-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 SUPERFAMILY SSF52440 3 123 1.93E-38 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 SUPERFAMILY SSF56059 124 311 5.55E-52 T 11-11-2016 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 Gene3D G3DSA:3.30.470.20 193 300 3.3E-45 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 TIGRFAM TIGR01380 glut_syn: glutathione synthase 3 312 2.9E-136 T 11-11-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 Gene3D G3DSA:3.30.1490.20 138 192 2.2E-25 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 2.9E-71 T 11-11-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 Hamap MF_00162 Glutathione synthetase [gshB]. 1 316 153.888 T 11-11-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 ATY42_RS08455 c7e79a755ea4152ec573f1f9e8aace4a 316 Gene3D G3DSA:3.40.50.20 3 130 2.9E-47 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS21175 2da2fffd52673e0ea6a8495bf9ab054a 407 Gene3D G3DSA:1.20.1250.20 27 185 1.3E-15 T 11-11-2016 ATY42_RS21175 2da2fffd52673e0ea6a8495bf9ab054a 407 Gene3D G3DSA:1.20.1250.20 216 390 4.7E-14 T 11-11-2016 ATY42_RS21175 2da2fffd52673e0ea6a8495bf9ab054a 407 Pfam PF07690 Major Facilitator Superfamily 26 241 1.8E-15 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS21175 2da2fffd52673e0ea6a8495bf9ab054a 407 SUPERFAMILY SSF103473 13 392 6.28E-38 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS12375 904fbbb0c65bd20d06c0fc1515e5eba2 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 42.187 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ATY42_RS12375 904fbbb0c65bd20d06c0fc1515e5eba2 210 SUPERFAMILY SSF53271 3 206 8.52E-63 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS12375 904fbbb0c65bd20d06c0fc1515e5eba2 210 Gene3D G3DSA:3.40.50.2020 2 207 5.4E-72 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS12375 904fbbb0c65bd20d06c0fc1515e5eba2 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.7E-63 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS12375 904fbbb0c65bd20d06c0fc1515e5eba2 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 207 1.3E-80 T 11-11-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 SUPERFAMILY SSF55486 243 487 3.52E-72 T 11-11-2016 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 Pfam PF11838 ERAP1-like C-terminal domain 558 878 2.0E-36 T 11-11-2016 IPR024571 ERAP1-like C-terminal domain ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 Gene3D G3DSA:1.10.390.10 342 489 6.4E-45 T 11-11-2016 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 Pfam PF01433 Peptidase family M1 33 419 9.2E-104 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 SUPERFAMILY SSF63737 27 225 1.03E-48 T 11-11-2016 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 303 1.6E-21 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 328 343 1.6E-21 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 160 175 1.6E-21 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 208 223 1.6E-21 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS16990 c00068788664698dd6fa17d098a27578 889 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 347 359 1.6E-21 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 260 1.2E-113 T 11-11-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 243 7.8E-31 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 8.2E-49 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 SUPERFAMILY SSF117143 93 222 4.45E-34 T 11-11-2016 ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 Pfam PF00460 Flagella basal body rod protein 5 35 8.2E-14 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATY42_RS12765 3c4e42b3991c270d41a32bb2c8658bc2 261 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 182 259 1.1E-23 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATY42_RS09905 a3f8e35665f94c7b55a3e6428b745526 197 SUPERFAMILY SSF102405 1 179 2.75E-61 T 11-11-2016 ATY42_RS09905 a3f8e35665f94c7b55a3e6428b745526 197 Pfam PF03641 Possible lysine decarboxylase 46 168 9.0E-39 T 11-11-2016 IPR031100 LOG family ATY42_RS09905 a3f8e35665f94c7b55a3e6428b745526 197 Gene3D G3DSA:3.40.50.450 2 188 7.5E-67 T 11-11-2016 ATY42_RS09905 a3f8e35665f94c7b55a3e6428b745526 197 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 4.5E-58 T 11-11-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ATY42_RS05410 f1d4bfe2f83dc7d233451b3368fefa31 390 Pfam PF07396 Phosphate-selective porin O and P 42 390 5.7E-93 T 11-11-2016 IPR010870 Phosphate-selective porin O/P ATY42_RS05410 f1d4bfe2f83dc7d233451b3368fefa31 390 SUPERFAMILY SSF56935 108 160 1.89E-10 T 11-11-2016 ATY42_RS05410 f1d4bfe2f83dc7d233451b3368fefa31 390 SUPERFAMILY SSF56935 202 388 1.89E-10 T 11-11-2016 ATY42_RS05410 f1d4bfe2f83dc7d233451b3368fefa31 390 Gene3D G3DSA:2.40.160.10 19 390 4.8E-95 T 11-11-2016 IPR023614 Porin domain ATY42_RS14275 5e315848cfba21df66dce075016124da 358 Pfam PF01339 CheB methylesterase 172 350 2.3E-57 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 SUPERFAMILY SSF52738 167 354 1.07E-69 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 SMART SM00448 7 130 2.6E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 7 355 40.768 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 Pfam PF00072 Response regulator receiver domain 9 111 8.9E-25 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 Gene3D G3DSA:3.40.50.2300 6 113 3.0E-28 T 11-11-2016 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 SUPERFAMILY SSF52172 6 111 1.71E-28 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS14275 5e315848cfba21df66dce075016124da 358 PIRSF PIRSF000876 4 358 3.8E-135 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS14275 5e315848cfba21df66dce075016124da 358 Gene3D G3DSA:3.40.50.180 166 355 2.0E-78 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 234 253 3.2E-9 T 11-11-2016 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 78 96 3.2E-9 T 11-11-2016 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 216 233 3.2E-9 T 11-11-2016 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 254 272 3.2E-9 T 11-11-2016 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 SUPERFAMILY SSF103088 166 271 8.37E-33 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 Pfam PF00691 OmpA family 171 265 5.9E-23 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01021 OMPA domain signature 216 232 2.0E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01021 OMPA domain signature 171 193 2.0E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 PRINTS PR01021 OMPA domain signature 201 216 2.0E-11 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS17675 56fb41a444a67e631f4309dd52799d8e 272 Gene3D G3DSA:3.30.1330.60 169 271 1.4E-35 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS21120 5a325124663f823e42ff23f7915c827a 156 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 20 153 5.9E-36 T 11-11-2016 IPR012660 Thioesterase, putative ATY42_RS21120 5a325124663f823e42ff23f7915c827a 156 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 18 154 1.8E-49 T 11-11-2016 IPR012660 Thioesterase, putative ATY42_RS21120 5a325124663f823e42ff23f7915c827a 156 Gene3D G3DSA:3.10.129.10 4 155 9.4E-46 T 11-11-2016 IPR029069 HotDog domain ATY42_RS21120 5a325124663f823e42ff23f7915c827a 156 SUPERFAMILY SSF54637 12 153 6.04E-29 T 11-11-2016 IPR029069 HotDog domain ATY42_RS22960 04f86c66820092bb81ebd9a519d67df8 68 SUPERFAMILY SSF54593 6 59 7.79E-7 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS22960 04f86c66820092bb81ebd9a519d67df8 68 Gene3D G3DSA:3.10.180.10 9 64 4.3E-7 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 Gene3D G3DSA:3.40.630.10 14 219 1.3E-45 T 11-11-2016 ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 Gene3D G3DSA:3.40.630.10 407 468 1.3E-45 T 11-11-2016 ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 Pfam PF01546 Peptidase family M20/M25/M40 95 466 5.2E-21 T 11-11-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 SUPERFAMILY SSF53187 383 468 1.97E-47 T 11-11-2016 ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 SUPERFAMILY SSF53187 11 209 1.97E-47 T 11-11-2016 ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 Gene3D G3DSA:3.30.70.360 220 376 3.6E-31 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS06415 bb8562ebfcbc6e989a7c5b3c25d5432d 497 Pfam PF07687 Peptidase dimerisation domain 207 367 8.8E-14 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS12465 9665dfe3a5264299ed1f32fe3c881d81 463 Pfam PF01609 Transposase DDE domain 281 418 6.8E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12465 9665dfe3a5264299ed1f32fe3c881d81 463 Pfam PF05598 Transposase domain (DUF772) 59 132 5.6E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS22260 6d562800010f6c6527007493b4289a9e 293 Gene3D G3DSA:3.20.20.80 33 287 8.5E-56 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS22260 6d562800010f6c6527007493b4289a9e 293 SUPERFAMILY SSF51445 33 290 4.49E-65 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS22260 6d562800010f6c6527007493b4289a9e 293 SMART SM00633 18 286 3.3E-11 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 ATY42_RS22260 6d562800010f6c6527007493b4289a9e 293 Pfam PF00331 Glycosyl hydrolase family 10 34 282 2.1E-38 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 ATY42_RS00410 84e7cb836e4ae845cf3761befd4f1e60 187 Gene3D G3DSA:1.10.530.10 64 164 1.3E-20 T 11-11-2016 ATY42_RS00410 84e7cb836e4ae845cf3761befd4f1e60 187 Pfam PF01464 Transglycosylase SLT domain 66 162 1.5E-17 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 ATY42_RS00410 84e7cb836e4ae845cf3761befd4f1e60 187 SUPERFAMILY SSF53955 56 182 1.62E-40 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS11750 e3d20d3684e348601444affc77000903 161 Gene3D G3DSA:3.30.70.560 3 153 1.9E-52 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS11750 e3d20d3684e348601444affc77000903 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 90 101 - T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS11750 e3d20d3684e348601444affc77000903 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 135 6.3E-34 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS11750 e3d20d3684e348601444affc77000903 161 SUPERFAMILY SSF55083 1 149 4.45E-49 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS11750 e3d20d3684e348601444affc77000903 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 135 4.2E-42 T 11-11-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.4E-14 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 Gene3D G3DSA:3.40.50.2300 54 170 2.4E-41 T 11-11-2016 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 Pfam PF13377 Periplasmic binding protein-like domain 167 324 5.1E-33 T 11-11-2016 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 Gene3D G3DSA:1.10.260.40 4 53 6.1E-22 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 SMART SM00354 2 71 4.7E-26 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 Gene3D G3DSA:3.40.50.2300 171 305 1.6E-38 T 11-11-2016 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 SUPERFAMILY SSF47413 3 59 5.81E-15 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 11-11-2016 ATY42_RS13920 b7f401b27b1fc0d3f713b6c803af5458 331 SUPERFAMILY SSF53822 58 312 1.96E-64 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS00030 e3ae156028dbfeb3b41f5dd234e46cd7 268 Pfam PF01435 Peptidase family M48 61 246 1.4E-36 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ATY42_RS00030 e3ae156028dbfeb3b41f5dd234e46cd7 268 Gene3D G3DSA:3.30.2010.10 57 140 4.4E-17 T 11-11-2016 ATY42_RS03825 60ad77e8ec2c7279fc674cdf1432a468 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 335 3.0E-155 T 11-11-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 ATY42_RS03825 60ad77e8ec2c7279fc674cdf1432a468 351 Gene3D G3DSA:3.90.25.10 191 335 5.3E-56 T 11-11-2016 ATY42_RS03825 60ad77e8ec2c7279fc674cdf1432a468 351 SUPERFAMILY SSF51735 3 341 2.88E-93 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03825 60ad77e8ec2c7279fc674cdf1432a468 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 323 1.7E-101 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03825 60ad77e8ec2c7279fc674cdf1432a468 351 Gene3D G3DSA:3.40.50.720 4 190 2.7E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01040 a37955a9519c76dd6b0e29512e380ccd 70 Pfam PF13683 Integrase core domain 5 53 1.3E-19 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS01040 a37955a9519c76dd6b0e29512e380ccd 70 Gene3D G3DSA:3.30.420.10 5 54 4.2E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01040 a37955a9519c76dd6b0e29512e380ccd 70 SUPERFAMILY SSF53098 5 57 1.74E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10280 a27eb5c52e2326680d25291c227d9b36 219 SUPERFAMILY SSF74653 102 217 6.77E-23 T 11-11-2016 ATY42_RS10280 a27eb5c52e2326680d25291c227d9b36 219 Gene3D G3DSA:3.30.1150.10 108 218 2.4E-16 T 11-11-2016 ATY42_RS10280 a27eb5c52e2326680d25291c227d9b36 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 140 216 9.4E-24 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS10280 a27eb5c52e2326680d25291c227d9b36 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 141 217 6.2E-23 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF56553 53 177 2.35E-42 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 9 53 1.96E-31 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF55257 178 232 1.96E-31 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:3.30.1360.10 15 64 1.8E-10 T 11-11-2016 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 227 1.6E-24 T 11-11-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 255 326 2.0E-35 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 SUPERFAMILY SSF47789 250 323 1.83E-25 T 11-11-2016 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 SMART SM00662 23 233 1.2E-106 T 11-11-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 154 1.7E-24 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:2.170.120.12 65 176 1.8E-40 T 11-11-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Gene3D G3DSA:1.10.150.20 248 324 6.9E-35 T 11-11-2016 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 315 4.2E-109 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 316 34.74 T 11-11-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS17925 62daab23d1271f12095d2da269f76b2e 332 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 251 307 1.3E-23 T 11-11-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ATY42_RS11320 381dd5d71344173497b6ef2bd75dab56 299 SUPERFAMILY SSF53098 146 289 6.53E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11320 381dd5d71344173497b6ef2bd75dab56 299 Gene3D G3DSA:3.30.420.10 146 288 1.6E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11320 381dd5d71344173497b6ef2bd75dab56 299 Gene3D G3DSA:1.10.10.60 50 95 8.1E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11320 381dd5d71344173497b6ef2bd75dab56 299 Pfam PF00665 Integrase core domain 156 248 2.9E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 6 176 6.6E-43 T 11-11-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 Gene3D G3DSA:3.30.360.10 176 465 4.9E-102 T 11-11-2016 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 SUPERFAMILY SSF51735 3 179 1.77E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 Gene3D G3DSA:3.40.50.720 4 175 5.0E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 SUPERFAMILY SSF55347 171 466 1.01E-96 T 11-11-2016 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 PIRSF PIRSF000110 1 476 2.1E-164 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 179 465 1.5E-95 T 11-11-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 2 467 68.502 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 3.5E-40 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 3.5E-40 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 3.5E-40 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 3.5E-40 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 3.5E-40 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11465 67bfd766399d9eb3c575fa3b93882ed2 476 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 3 465 2.6E-136 T 11-11-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 16 584 4.0E-177 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 384 538 1.2E-47 T 11-11-2016 IPR001162 UvrC family homology region ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Pfam PF01541 GIY-YIG catalytic domain 23 97 7.2E-7 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Hamap MF_00203 UvrABC system protein C [uvrC]. 8 603 26.866 T 11-11-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Gene3D G3DSA:3.40.1440.10 22 98 7.3E-6 T 11-11-2016 IPR027299 GIY-YIG domain ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 SUPERFAMILY SSF82771 21 104 2.09E-17 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 SUPERFAMILY SSF46600 193 246 3.14E-12 T 11-11-2016 IPR001943 UVR domain GO:0005515 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Gene3D G3DSA:1.10.150.20 551 605 7.1E-19 T 11-11-2016 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Pfam PF02151 UvrB/uvrC motif 212 240 3.9E-8 T 11-11-2016 IPR001943 UVR domain GO:0005515 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 SMART SM00465 21 102 1.8E-15 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 SMART SM00278 552 571 1.2 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 SMART SM00278 584 603 230.0 T 11-11-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 Gene3D G3DSA:4.10.860.10 188 246 1.1E-16 T 11-11-2016 IPR001943 UVR domain GO:0005515 ATY42_RS11350 9fa2f6864072f84b04ff6828614b9da2 618 SUPERFAMILY SSF47781 519 605 5.72E-19 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS22040 57546b6bce3fddd167cd48e59934f983 309 SUPERFAMILY SSF49478 120 168 1.14E-5 T 11-11-2016 ATY42_RS17570 61432205d82f718c7512b5bd7598762c 320 Gene3D G3DSA:3.90.1580.10 43 264 4.3E-45 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS17570 61432205d82f718c7512b5bd7598762c 320 SUPERFAMILY SSF56436 53 263 3.14E-45 T 11-11-2016 IPR016187 C-type lectin fold ATY42_RS17570 61432205d82f718c7512b5bd7598762c 320 Pfam PF03781 Sulfatase-modifying factor enzyme 1 51 252 7.4E-38 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS18855 43ebd8d965dce936cd3dd1365ee41d83 813 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 771 20.588 T 11-11-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 ATY42_RS18855 43ebd8d965dce936cd3dd1365ee41d83 813 Pfam PF03968 OstA-like protein 62 191 9.8E-7 T 11-11-2016 IPR005653 Organic solvent tolerance-like, N-terminal ATY42_RS18855 43ebd8d965dce936cd3dd1365ee41d83 813 Gene3D G3DSA:2.60.450.10 55 204 7.9E-12 T 11-11-2016 ATY42_RS18855 43ebd8d965dce936cd3dd1365ee41d83 813 Pfam PF04453 Organic solvent tolerance protein 296 710 5.0E-102 T 11-11-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 72 3.0E-15 T 11-11-2016 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.919 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 Gene3D G3DSA:3.30.1550.10 3 72 9.2E-35 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 Gene3D G3DSA:1.10.10.250 73 141 2.6E-29 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 9.9E-23 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 SUPERFAMILY SSF46906 68 141 1.26E-23 T 11-11-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.3E-28 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 SMART SM00649 9 141 2.7E-80 T 11-11-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 SUPERFAMILY SSF54747 4 72 5.49E-28 T 11-11-2016 IPR020784 Ribosomal protein L11, N-terminal ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 141 8.1E-63 T 11-11-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18100 794bcea43af024fc95b738517ed2500a 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-11-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS16730 cfca26e12fb73b34b5f2b4272c422836 337 Gene3D G3DSA:2.40.100.10 197 251 1.1E-20 T 11-11-2016 IPR029000 Cyclophilin-like domain ATY42_RS16730 cfca26e12fb73b34b5f2b4272c422836 337 Gene3D G3DSA:2.40.100.10 82 159 1.1E-20 T 11-11-2016 IPR029000 Cyclophilin-like domain ATY42_RS16730 cfca26e12fb73b34b5f2b4272c422836 337 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 84 252 2.0E-26 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS16730 cfca26e12fb73b34b5f2b4272c422836 337 SUPERFAMILY SSF50891 83 159 6.57E-29 T 11-11-2016 IPR029000 Cyclophilin-like domain ATY42_RS16730 cfca26e12fb73b34b5f2b4272c422836 337 SUPERFAMILY SSF50891 196 298 6.57E-29 T 11-11-2016 IPR029000 Cyclophilin-like domain ATY42_RS04330 ee243982269aadc3f4283629494a5fdb 332 SUPERFAMILY SSF53590 41 328 7.59E-53 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS04330 ee243982269aadc3f4283629494a5fdb 332 Gene3D G3DSA:3.90.245.10 39 329 3.1E-55 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS04330 ee243982269aadc3f4283629494a5fdb 332 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 41 321 1.6E-36 T 11-11-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 SUPERFAMILY SSF46689 90 180 2.37E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 SUPERFAMILY SSF52172 10 119 1.12E-27 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 147 164 1.8E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 164 184 1.8E-9 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 Gene3D G3DSA:1.10.10.60 126 182 1.4E-25 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 Pfam PF02954 Bacterial regulatory protein, Fis family 147 180 1.1E-12 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 Gene3D G3DSA:3.40.50.2300 10 120 8.3E-26 T 11-11-2016 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 Pfam PF00072 Response regulator receiver domain 10 117 7.4E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS10880 40ca4920bb0e5afc70b01c6fe5b4fe4d 188 SMART SM00448 7 118 7.3E-18 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15570 c9a79d25e16723870054b236bb23dc04 189 SUPERFAMILY SSF53448 7 180 2.7E-26 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS15570 c9a79d25e16723870054b236bb23dc04 189 Gene3D G3DSA:3.90.550.10 2 183 1.9E-37 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS15570 c9a79d25e16723870054b236bb23dc04 189 Pfam PF12804 MobA-like NTP transferase domain 9 151 9.0E-28 T 11-11-2016 IPR025877 MobA-like NTP transferase ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 7.0E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 Pfam PF00106 short chain dehydrogenase 6 193 8.8E-33 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 Gene3D G3DSA:3.40.50.720 5 251 9.2E-42 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05780 45ea98ec696284e4f9e38c730bc5b194 279 SUPERFAMILY SSF51735 1 260 3.25E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13660 6bb4493d536d57a0e513b9271f7d737b 146 SUPERFAMILY SSF101738 6 117 6.15E-45 T 11-11-2016 IPR007481 Stringent starvation protein B ATY42_RS13660 6bb4493d536d57a0e513b9271f7d737b 146 PIRSF PIRSF005276 5 146 3.8E-54 T 11-11-2016 IPR007481 Stringent starvation protein B ATY42_RS13660 6bb4493d536d57a0e513b9271f7d737b 146 Pfam PF04386 Stringent starvation protein B 11 146 5.2E-34 T 11-11-2016 IPR007481 Stringent starvation protein B ATY42_RS13660 6bb4493d536d57a0e513b9271f7d737b 146 Gene3D G3DSA:2.30.30.220 7 109 1.7E-44 T 11-11-2016 IPR007481 Stringent starvation protein B ATY42_RS01895 406a1eb2763de298075165537a4aa6af 156 Gene3D G3DSA:2.40.50.100 82 113 2.9E-5 T 11-11-2016 ATY42_RS01895 406a1eb2763de298075165537a4aa6af 156 Pfam PF13437 HlyD family secretion protein 84 143 9.1E-9 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 Pfam PF05954 Phage late control gene D protein (GPD) 23 328 3.8E-83 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 SUPERFAMILY SSF69255 365 453 1.8E-27 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 6 524 1.2E-171 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 SUPERFAMILY SSF69279 11 183 1.02E-52 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 Gene3D G3DSA:2.40.50.230 371 453 1.5E-30 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 SUPERFAMILY SSF69349 443 641 3.84E-34 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 Gene3D G3DSA:3.55.50.10 96 187 8.2E-36 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 SUPERFAMILY SSF69279 192 365 7.31E-32 T 11-11-2016 ATY42_RS15270 c91d21759ec7176ed5668ef0a6216d52 645 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 18 506 2.4E-133 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 PRINTS PR00775 90kDa heat shock protein signature 34 56 2.3E-13 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 PRINTS PR00775 90kDa heat shock protein signature 188 206 2.3E-13 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 PRINTS PR00775 90kDa heat shock protein signature 170 187 2.3E-13 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 PRINTS PR00775 90kDa heat shock protein signature 118 140 2.3E-13 T 11-11-2016 IPR020575 Heat shock protein Hsp90, N-terminal ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 SUPERFAMILY SSF55874 14 209 5.08E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 Pfam PF00183 Hsp90 protein 278 357 2.6E-8 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 SUPERFAMILY SSF54211 219 458 3.49E-33 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 163 4.0E-8 T 11-11-2016 ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 PIRSF PIRSF002583 3 614 4.8E-102 T 11-11-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 ATY42_RS06785 ff5ad468463341a441d10ef936193154 622 Gene3D G3DSA:3.30.565.10 19 224 1.0E-39 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 SUPERFAMILY SSF48179 168 298 1.03E-38 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 296 2.5E-33 T 11-11-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 Gene3D G3DSA:3.40.50.720 6 168 1.7E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 PIRSF PIRSF000103 2 300 1.5E-80 T 11-11-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 8 167 7.3E-51 T 11-11-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 11-11-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 Gene3D G3DSA:1.10.1040.10 169 299 1.4E-42 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 SUPERFAMILY SSF51735 6 167 1.11E-46 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS08945 b931257c47560a5c537cef6b43c33c6e 300 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 11 296 3.7E-122 T 11-11-2016 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 115 149 - T 11-11-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 155 45.028 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 SUPERFAMILY SSF53098 3 156 3.03E-47 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.0E-35 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 140 152 1.0E-35 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 109 128 1.0E-35 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 63 79 1.0E-35 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 85 101 1.0E-35 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 152 4.9E-48 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 Gene3D G3DSA:3.30.420.10 3 156 2.1E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08195 0fb11bdad7bbf7b0565e08079b787fad 174 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 156 3.9E-50 T 11-11-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 ATY42_RS08790 7e580806957b5e6ad75ac9f917937471 245 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 15 239 44.777 T 11-11-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 ATY42_RS08790 7e580806957b5e6ad75ac9f917937471 245 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 21 237 7.0E-85 T 11-11-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 ATY42_RS08790 7e580806957b5e6ad75ac9f917937471 245 Pfam PF00912 Transglycosylase 70 230 2.5E-45 T 11-11-2016 IPR001264 Glycosyl transferase, family 51 ATY42_RS08790 7e580806957b5e6ad75ac9f917937471 245 Gene3D G3DSA:1.10.3810.10 69 234 2.6E-54 T 11-11-2016 ATY42_RS08790 7e580806957b5e6ad75ac9f917937471 245 SUPERFAMILY SSF53955 67 237 2.31E-55 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 SUPERFAMILY SSF47413 14 72 9.38E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 Gene3D G3DSA:1.10.260.40 15 66 1.0E-22 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 ProSitePatterns PS00356 LacI-type HTH domain signature. 17 35 - T 11-11-2016 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 SMART SM00354 14 84 9.0E-27 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 Gene3D G3DSA:3.40.50.2300 187 323 5.1E-52 T 11-11-2016 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 Pfam PF00356 Bacterial regulatory proteins, lacI family 16 61 4.4E-19 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 Gene3D G3DSA:3.40.50.2300 67 186 9.1E-28 T 11-11-2016 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 Pfam PF13377 Periplasmic binding protein-like domain 182 345 2.8E-38 T 11-11-2016 ATY42_RS22200 287ec84f823cc09f4b26b401376efd10 355 SUPERFAMILY SSF53822 75 349 3.3E-67 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 SUPERFAMILY SSF47384 217 297 4.9E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 5.5E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 Gene3D G3DSA:1.10.287.130 226 295 7.1E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 444 1.1E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 Gene3D G3DSA:1.20.5.1040 126 176 1.8E-4 T 11-11-2016 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 SUPERFAMILY SSF55874 307 445 5.24E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 Gene3D G3DSA:3.30.565.10 304 445 4.5E-27 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 SMART SM00387 342 451 2.4E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 3.1E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 3.1E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 SMART SM00388 234 299 9.0E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS05795 84c5f81b7a12857be5bc6e208918a2ab 453 Pfam PF08521 Two-component sensor kinase N-terminal 9 157 1.1E-9 T 11-11-2016 IPR013727 Two-component sensor kinase, N-terminal ATY42_RS12670 c9a96f6205d5e778e93963fc6c597f57 152 Gene3D G3DSA:3.90.79.10 7 148 4.0E-31 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS12670 c9a96f6205d5e778e93963fc6c597f57 152 Pfam PF00293 NUDIX domain 12 120 1.1E-14 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS12670 c9a96f6205d5e778e93963fc6c597f57 152 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-11-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ATY42_RS12670 c9a96f6205d5e778e93963fc6c597f57 152 SUPERFAMILY SSF55811 6 145 4.47E-29 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS01695 12bcf796d7e962948b596060fd3d73ae 368 Pfam PF01609 Transposase DDE domain 175 351 1.8E-6 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS01695 12bcf796d7e962948b596060fd3d73ae 368 Pfam PF05598 Transposase domain (DUF772) 56 130 1.9E-22 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS01750 918321052a1bf4e4e44a9c8ccd8a2488 66 Pfam PF01381 Helix-turn-helix 5 57 6.5E-17 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS01750 918321052a1bf4e4e44a9c8ccd8a2488 66 Gene3D G3DSA:1.10.260.40 1 64 5.5E-23 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS01750 918321052a1bf4e4e44a9c8ccd8a2488 66 SMART SM00530 4 59 1.2E-18 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS01750 918321052a1bf4e4e44a9c8ccd8a2488 66 SUPERFAMILY SSF47413 3 64 4.02E-18 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS19480 e404e582a0920158f7fb3c59d71fac0a 190 PIRSF PIRSF033318 2 170 5.6E-80 T 11-11-2016 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS19480 e404e582a0920158f7fb3c59d71fac0a 190 SUPERFAMILY SSF51316 2 156 4.29E-39 T 11-11-2016 IPR011057 Mss4-like ATY42_RS19480 e404e582a0920158f7fb3c59d71fac0a 190 TIGRFAM TIGR02820 formald_GSH: S-(hydroxymethyl)glutathione synthase 6 158 1.3E-78 T 11-11-2016 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS19480 e404e582a0920158f7fb3c59d71fac0a 190 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 49 116 1.3E-8 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS19480 e404e582a0920158f7fb3c59d71fac0a 190 Hamap MF_00723 Glutathione-dependent formaldehyde-activating enzyme [gfa]. 1 190 97.831 T 11-11-2016 IPR014185 Glutathione-dependent formaldehyde-activating enzyme GO:0008270|GO:0046294|GO:0051907 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS19480 e404e582a0920158f7fb3c59d71fac0a 190 Gene3D G3DSA:3.90.1590.10 2 157 2.1E-40 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS19985 7e8eeacb71a05ba925f65f8db5426578 151 SUPERFAMILY SSF53927 7 148 1.1E-34 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS19985 7e8eeacb71a05ba925f65f8db5426578 151 Gene3D G3DSA:3.40.140.10 5 137 1.8E-30 T 11-11-2016 ATY42_RS19985 7e8eeacb71a05ba925f65f8db5426578 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 8 102 1.1E-15 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ATY42_RS13425 1cfb299316b9e4b62b8ad9359f8401dd 141 Pfam PF01337 Barstar (barnase inhibitor) 43 125 7.0E-23 T 11-11-2016 IPR000468 Barstar (barnase inhibitor) ATY42_RS13425 1cfb299316b9e4b62b8ad9359f8401dd 141 Gene3D G3DSA:3.30.370.10 40 130 2.4E-20 T 11-11-2016 IPR000468 Barstar (barnase inhibitor) ATY42_RS13425 1cfb299316b9e4b62b8ad9359f8401dd 141 SUPERFAMILY SSF52038 40 130 1.26E-22 T 11-11-2016 IPR000468 Barstar (barnase inhibitor) ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 242 320 1.2E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 SUPERFAMILY SSF50156 230 342 8.1E-14 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 SUPERFAMILY SSF52096 165 265 9.11E-68 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 SUPERFAMILY SSF52096 360 555 9.11E-68 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 SMART SM00228 247 325 1.8E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 207 569 2.1E-90 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 Gene3D G3DSA:3.90.226.10 339 552 1.4E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 Gene3D G3DSA:3.90.226.10 614 636 1.4E-61 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 Gene3D G3DSA:2.30.42.10 247 338 9.8E-19 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 SMART SM00245 330 550 9.0E-50 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 Pfam PF03572 Peptidase family S41 366 548 1.3E-51 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ATY42_RS19870 7e6f808ed83e70aee1ce7b34971ad3e4 727 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 553 702 8.5E-39 T 11-11-2016 IPR020992 Tail specific protease, C-terminal ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SUPERFAMILY SSF50998 63 494 2.75E-68 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SMART SM00564 378 414 160.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SMART SM00564 203 249 0.002 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SMART SM00564 429 479 31.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SMART SM00564 497 529 9.4E-5 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SMART SM00564 158 190 4.5E-4 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SMART SM00564 110 142 7.9E-4 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 Pfam PF13360 PQQ-like domain 48 217 8.8E-19 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 Pfam PF13360 PQQ-like domain 465 565 3.5E-11 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 Pfam PF13360 PQQ-like domain 232 420 5.1E-6 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 Gene3D G3DSA:2.140.10.10 60 571 1.2E-90 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 Gene3D G3DSA:2.140.10.10 11 27 1.2E-90 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain ATY42_RS01490 af5b3896543070563433e1b6051d59b4 584 SUPERFAMILY SSF50998 466 573 2.09E-17 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 Pfam PF01202 Shikimate kinase 13 167 3.8E-46 T 11-11-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 Gene3D G3DSA:3.40.50.300 4 167 8.1E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-11-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 SUPERFAMILY SSF52540 5 165 8.89E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 PRINTS PR01100 Shikimate kinase family signature 59 67 1.4E-20 T 11-11-2016 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 PRINTS PR01100 Shikimate kinase family signature 7 22 1.4E-20 T 11-11-2016 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 PRINTS PR01100 Shikimate kinase family signature 77 86 1.4E-20 T 11-11-2016 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 PRINTS PR01100 Shikimate kinase family signature 98 115 1.4E-20 T 11-11-2016 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 PRINTS PR01100 Shikimate kinase family signature 31 44 1.4E-20 T 11-11-2016 ATY42_RS06105 9e72fb081b08d866df4759fbd6554cc6 180 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 26.908 T 11-11-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ATY42_RS21375 9444935abd497d7a5a1a728aee387e60 213 Pfam PF01609 Transposase DDE domain 37 171 9.8E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS03185 f8656b0027bf01ebb26f407d068bae6a 189 SUPERFAMILY SSF52218 1 188 1.57E-46 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS03185 f8656b0027bf01ebb26f407d068bae6a 189 Pfam PF03358 NADPH-dependent FMN reductase 45 112 3.9E-9 T 11-11-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ATY42_RS03185 f8656b0027bf01ebb26f407d068bae6a 189 Gene3D G3DSA:3.40.50.360 1 188 1.6E-62 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS03185 f8656b0027bf01ebb26f407d068bae6a 189 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-11-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ATY42_RS22035 5dcbffd99a5da9a5c26df664b6eb9991 85 Pfam PF12365 Protein of unknown function (DUF3649) 53 78 5.5E-7 T 11-11-2016 IPR022109 Protein of unknown function DUF3649 ATY42_RS09100 c09b56ab65731d8bca65d164d61a0754 340 SUPERFAMILY SSF56281 19 329 1.74E-58 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS09100 c09b56ab65731d8bca65d164d61a0754 340 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 16 339 9.9E-145 T 11-11-2016 IPR026360 Putative exonuclease, DNA ligase-associated ATY42_RS09100 c09b56ab65731d8bca65d164d61a0754 340 Gene3D G3DSA:3.60.15.10 41 195 5.8E-15 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS04320 bce5b449f4b32cc4a5a8a00dbe5a6c76 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04320 bce5b449f4b32cc4a5a8a00dbe5a6c76 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS20595 bce5b449f4b32cc4a5a8a00dbe5a6c76 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20595 bce5b449f4b32cc4a5a8a00dbe5a6c76 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS19655 bce5b449f4b32cc4a5a8a00dbe5a6c76 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS19655 bce5b449f4b32cc4a5a8a00dbe5a6c76 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10585 841e1302d5bc8c1a94fdda8742310a98 179 SUPERFAMILY SSF55729 1 162 7.38E-30 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS10585 841e1302d5bc8c1a94fdda8742310a98 179 Pfam PF13420 Acetyltransferase (GNAT) domain 5 156 1.1E-25 T 11-11-2016 ATY42_RS10585 841e1302d5bc8c1a94fdda8742310a98 179 Gene3D G3DSA:3.40.630.30 1 168 8.3E-38 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS09580 c2bb85467f80c598d3c6311dcde7f136 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 11-11-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ATY42_RS09580 c2bb85467f80c598d3c6311dcde7f136 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 17 237 3.1E-75 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATY42_RS09580 c2bb85467f80c598d3c6311dcde7f136 253 Gene3D G3DSA:3.40.1180.10 9 245 3.5E-95 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATY42_RS09580 c2bb85467f80c598d3c6311dcde7f136 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 10 238 39.367 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATY42_RS09580 c2bb85467f80c598d3c6311dcde7f136 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 10 237 6.6E-85 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATY42_RS09580 c2bb85467f80c598d3c6311dcde7f136 253 SUPERFAMILY SSF64005 8 233 1.7E-82 T 11-11-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 Gene3D G3DSA:3.30.450.90 167 297 3.0E-52 T 11-11-2016 ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 Pfam PF00437 Type II/IV secretion system protein 200 464 2.2E-84 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 SUPERFAMILY SSF160246 14 157 3.66E-32 T 11-11-2016 ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 53 161 3.5E-14 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 SUPERFAMILY SSF52540 182 572 7.23E-94 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 SMART SM00382 325 446 7.5E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 392 406 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 Gene3D G3DSA:3.40.50.300 302 573 3.5E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04070 05401f097fe87dcda65ac806a6e4311e 575 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 92 572 1.1E-208 T 11-11-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 ATY42_RS04690 ae8f7ad9934cc052b99fbcac3990d1e6 707 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 150 8.7E-5 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04690 ae8f7ad9934cc052b99fbcac3990d1e6 707 SUPERFAMILY SSF56935 29 707 3.15E-78 T 11-11-2016 ATY42_RS04690 ae8f7ad9934cc052b99fbcac3990d1e6 707 Gene3D G3DSA:2.40.170.20 149 707 8.8E-60 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14950 b270e0e3f407d601be3c1e1b67b2bf0d 283 Pfam PF02706 Chain length determinant protein 5 133 6.8E-9 T 11-11-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 PIRSF PIRSF500176 1 160 7.1E-22 T 11-11-2016 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 SUPERFAMILY SSF53774 1 156 1.7E-32 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 8.9E-6 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 PRINTS PR00139 Asparaginase/glutaminase family signature 75 93 8.9E-6 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 Pfam PF00710 Asparaginase, N-terminal 4 155 6.4E-24 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 Gene3D G3DSA:3.40.50.1170 2 158 8.1E-30 T 11-11-2016 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ATY42_RS18245 7ab09618e70d5273996cb01c6e89ad66 161 PIRSF PIRSF001220 1 161 6.9E-20 T 11-11-2016 IPR006034 Asparaginase/glutaminase GO:0006520 Reactome: R-HSA-70614 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 SUPERFAMILY SSF56719 30 520 1.96E-177 T 11-11-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Gene3D G3DSA:1.10.268.10 362 495 1.4E-44 T 11-11-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 875 24.065 T 11-11-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 SMART SM00434 11 498 1.5E-277 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 SUPERFAMILY SSF101904 772 880 4.05E-104 T 11-11-2016 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 SUPERFAMILY SSF101904 532 739 4.05E-104 T 11-11-2016 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Gene3D G3DSA:2.120.10.90 531 738 1.0E-126 T 11-11-2016 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Gene3D G3DSA:2.120.10.90 774 873 1.0E-126 T 11-11-2016 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 8.5E-154 T 11-11-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Gene3D G3DSA:3.30.1360.40 236 332 7.3E-39 T 11-11-2016 IPR024946 Arginine repressor C-terminal-like domain ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 579 6.8E-10 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 777 822 1.4E-16 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 827 873 1.3E-11 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 5.8E-13 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 5.4E-10 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 1.1E-10 T 11-11-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 873 0.0 T 11-11-2016 ATY42_RS11940 04af4617c7f4a06ddf11439c73c5e97b 898 Gene3D G3DSA:3.90.199.10 34 216 4.9E-83 T 11-11-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ATY42_RS03835 4b99210df93033b6693fb33e60705332 185 SUPERFAMILY SSF51182 2 176 8.26E-74 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS03835 4b99210df93033b6693fb33e60705332 185 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 4.0E-99 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ATY42_RS03835 4b99210df93033b6693fb33e60705332 185 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 174 3.9E-72 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ATY42_RS03835 4b99210df93033b6693fb33e60705332 185 Gene3D G3DSA:2.60.120.10 2 176 3.0E-79 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS03835 4b99210df93033b6693fb33e60705332 185 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 175 1.5E-79 T 11-11-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 222 346 1.7E-32 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 347 2.3E-63 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 Gene3D G3DSA:3.90.78.10 246 349 2.6E-39 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 SUPERFAMILY SSF56176 17 200 2.73E-36 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 Pfam PF01565 FAD binding domain 33 153 1.9E-16 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 350 79.835 T 11-11-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 Gene3D G3DSA:3.30.43.10 16 78 1.9E-19 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 Gene3D G3DSA:3.30.465.10 87 245 1.8E-48 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ATY42_RS10930 40f122c7af3744348b52c1f4f1f2aaad 350 SUPERFAMILY SSF56194 220 348 3.14E-43 T 11-11-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS15760 d3c9bf649ecacdac83b5bbb434f6b66c 312 Gene3D G3DSA:3.10.310.10 145 300 8.2E-49 T 11-11-2016 ATY42_RS15760 d3c9bf649ecacdac83b5bbb434f6b66c 312 SUPERFAMILY SSF54506 2 310 8.3E-92 T 11-11-2016 ATY42_RS15760 d3c9bf649ecacdac83b5bbb434f6b66c 312 PIRSF PIRSF029792 1 312 4.9E-99 T 11-11-2016 IPR008794 Proline racemase family ATY42_RS15760 d3c9bf649ecacdac83b5bbb434f6b66c 312 Pfam PF05544 Proline racemase 6 310 7.9E-105 T 11-11-2016 IPR008794 Proline racemase family ATY42_RS15760 d3c9bf649ecacdac83b5bbb434f6b66c 312 Gene3D G3DSA:3.10.310.10 2 144 2.9E-51 T 11-11-2016 ATY42_RS02395 e4003ab0c900f62d464c76c5a738afe5 219 SUPERFAMILY SSF53271 5 209 6.59E-42 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS02395 e4003ab0c900f62d464c76c5a738afe5 219 Gene3D G3DSA:3.40.50.2020 7 214 2.0E-73 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS02395 e4003ab0c900f62d464c76c5a738afe5 219 Pfam PF00156 Phosphoribosyl transferase domain 50 158 1.2E-13 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATY42_RS02395 e4003ab0c900f62d464c76c5a738afe5 219 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 189 5.8E-55 T 11-11-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS02395 e4003ab0c900f62d464c76c5a738afe5 219 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 219 30.887 T 11-11-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|Reactome: R-HSA-500753 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 Gene3D G3DSA:3.30.1390.10 52 122 5.4E-27 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 SUPERFAMILY SSF48300 4 59 7.59E-18 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 Gene3D G3DSA:1.20.5.710 2 51 3.0E-21 T 11-11-2016 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 SUPERFAMILY SSF54736 52 122 7.67E-22 T 11-11-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.8E-42 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.9E-18 T 11-11-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 122 7.0E-28 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 22.914 T 11-11-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18085 24dd9cf93286f5f0c54d48a5d99301c5 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 122 5.7E-24 T 11-11-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS12070 da3e045a2e1eb9ebea646d5a0e8a4042 339 SUPERFAMILY SSF51430 19 326 2.75E-57 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS12070 da3e045a2e1eb9ebea646d5a0e8a4042 339 Gene3D G3DSA:3.20.20.100 19 329 2.3E-55 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS12070 da3e045a2e1eb9ebea646d5a0e8a4042 339 Pfam PF00248 Aldo/keto reductase family 32 323 1.5E-37 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 Gene3D G3DSA:3.30.465.10 99 218 3.6E-42 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 Gene3D G3DSA:1.10.45.10 418 457 7.1E-16 T 11-11-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 SUPERFAMILY SSF56176 9 217 4.35E-71 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 Pfam PF01565 FAD binding domain 43 182 1.3E-43 T 11-11-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 457 2.0E-66 T 11-11-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 Gene3D G3DSA:3.30.43.10 6 98 4.0E-26 T 11-11-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 ATY42_RS19335 6c9be46779b3e2024184ddd79e9c2b25 461 SUPERFAMILY SSF55103 192 460 9.16E-63 T 11-11-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ATY42_RS19215 0acaf58e8c80130bb18404489c9a36ff 313 SUPERFAMILY SSF51261 82 301 3.3E-57 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS19215 0acaf58e8c80130bb18404489c9a36ff 313 Pfam PF01551 Peptidase family M23 203 297 5.8E-32 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS19215 0acaf58e8c80130bb18404489c9a36ff 313 Gene3D G3DSA:2.70.70.10 165 302 1.9E-49 T 11-11-2016 ATY42_RS22210 eab32d4431b828db64296267e225a066 654 Gene3D G3DSA:2.60.120.260 266 365 2.5E-11 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS22210 eab32d4431b828db64296267e225a066 654 SUPERFAMILY SSF49785 245 377 4.25E-17 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS22210 eab32d4431b828db64296267e225a066 654 SUPERFAMILY SSF52266 109 213 2.87E-68 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS22210 eab32d4431b828db64296267e225a066 654 SUPERFAMILY SSF52266 417 590 2.87E-68 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS22210 eab32d4431b828db64296267e225a066 654 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 266 374 1.5E-7 T 11-11-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS22210 eab32d4431b828db64296267e225a066 654 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 110 540 2.8E-85 T 11-11-2016 IPR005181 Sialate O-acetylesterase domain ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 PIRSF PIRSF019251 6 457 1.6E-153 T 11-11-2016 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 Pfam PF13560 Helix-turn-helix domain 11 57 9.5E-12 T 11-11-2016 ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 SMART SM00530 15 69 1.7E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 Pfam PF06114 Domain of unknown function (DUF955) 191 312 4.8E-21 T 11-11-2016 IPR010359 HTH domain, IrrE-type ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 Gene3D G3DSA:1.10.260.40 2 74 6.1E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 313 454 1.7E-60 T 11-11-2016 IPR018653 Domain of unknown function DUF2083,transcriptional regulator ATY42_RS08920 f3db9ab56709259f6ca0c235058608b7 461 SUPERFAMILY SSF47413 7 64 2.82E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS04390 544766051f67d7dce64b773e7f24756b 128 SUPERFAMILY SSF52172 1 121 1.57E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS04390 544766051f67d7dce64b773e7f24756b 128 Pfam PF00072 Response regulator receiver domain 4 114 1.1E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS04390 544766051f67d7dce64b773e7f24756b 128 Gene3D G3DSA:3.40.50.2300 1 125 9.7E-40 T 11-11-2016 ATY42_RS04390 544766051f67d7dce64b773e7f24756b 128 SMART SM00448 2 115 2.9E-39 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS18265 4694da02d075f755f44381101b2f32be 184 SUPERFAMILY SSF117916 82 182 2.75E-26 T 11-11-2016 ATY42_RS18265 4694da02d075f755f44381101b2f32be 184 Pfam PF01883 Domain of unknown function DUF59 86 160 1.0E-11 T 11-11-2016 IPR002744 Domain of unknown function DUF59 ATY42_RS18265 4694da02d075f755f44381101b2f32be 184 TIGRFAM TIGR03406 FeS_long_SufT: probable FeS assembly SUF system protein SufT 9 183 7.7E-82 T 11-11-2016 IPR017776 FeS assembly SUF system protein SufT, putative ATY42_RS08590 321993f295a2e544181437c82c2ea813 487 Gene3D G3DSA:1.50.10.10 56 484 2.1E-170 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 ATY42_RS08590 321993f295a2e544181437c82c2ea813 487 SMART SM01149 72 475 4.2E-251 T 11-11-2016 IPR008313 Metal-independent alpha-mannosidase ATY42_RS08590 321993f295a2e544181437c82c2ea813 487 Pfam PF06824 Protein of unknown function (DUF1237) 72 474 3.4E-149 T 11-11-2016 IPR008313 Metal-independent alpha-mannosidase ATY42_RS08590 321993f295a2e544181437c82c2ea813 487 SUPERFAMILY SSF48208 42 484 6.05E-168 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS08590 321993f295a2e544181437c82c2ea813 487 PIRSF PIRSF028846 50 486 3.4E-197 T 11-11-2016 IPR008313 Metal-independent alpha-mannosidase ATY42_RS23050 5c746e6550f0fc16df257dc410c17691 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 24 320 1.4E-14 T 11-11-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 ATY42_RS23050 5c746e6550f0fc16df257dc410c17691 330 Gene3D G3DSA:3.40.50.720 1 113 3.6E-24 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS23050 5c746e6550f0fc16df257dc410c17691 330 Gene3D G3DSA:3.40.50.720 114 290 6.9E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS23050 5c746e6550f0fc16df257dc410c17691 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 1.3E-47 T 11-11-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ATY42_RS23050 5c746e6550f0fc16df257dc410c17691 330 SUPERFAMILY SSF52283 1 135 9.14E-21 T 11-11-2016 ATY42_RS23050 5c746e6550f0fc16df257dc410c17691 330 SUPERFAMILY SSF51735 106 289 3.65E-47 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07100 85e7a2ba75abc25b1fe5e5c5f6d74908 346 SUPERFAMILY SSF53098 8 346 7.21E-17 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07100 85e7a2ba75abc25b1fe5e5c5f6d74908 346 Pfam PF13546 DDE superfamily endonuclease 11 284 1.6E-91 T 11-11-2016 ATY42_RS10820 0c246813a15ceecf9a481804d1d858d2 403 Pfam PF13546 DDE superfamily endonuclease 1 255 1.7E-84 T 11-11-2016 ATY42_RS10820 0c246813a15ceecf9a481804d1d858d2 403 SUPERFAMILY SSF53098 22 367 2.05E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 198 361 6.3E-39 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 21 369 35.585 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 Gene3D G3DSA:3.40.50.2000 267 342 5.8E-4 T 11-11-2016 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 21 158 5.6E-40 T 11-11-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 Gene3D G3DSA:3.40.50.2000 21 209 9.6E-62 T 11-11-2016 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 17 365 1.2E-107 T 11-11-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS19255 ebe4309137c64c2c1abdad85c8d1f896 441 SUPERFAMILY SSF53756 21 368 7.07E-113 T 11-11-2016 ATY42_RS07260 a7d58799fc88106febc8e1a4ece93952 171 Gene3D G3DSA:2.40.50.180 57 91 1.0E-8 T 11-11-2016 ATY42_RS07260 a7d58799fc88106febc8e1a4ece93952 171 Gene3D G3DSA:2.30.30.40 92 150 3.1E-4 T 11-11-2016 ATY42_RS07260 a7d58799fc88106febc8e1a4ece93952 171 SUPERFAMILY SSF50341 10 158 2.09E-36 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS07260 a7d58799fc88106febc8e1a4ece93952 171 SMART SM00260 15 156 7.9E-28 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS07260 a7d58799fc88106febc8e1a4ece93952 171 Pfam PF01584 CheW-like domain 19 157 1.3E-32 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 PRINTS PR01650 Bacterial translocase SecE signature 55 76 4.5E-15 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 PRINTS PR01650 Bacterial translocase SecE signature 100 120 4.5E-15 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 PRINTS PR01650 Bacterial translocase SecE signature 76 96 4.5E-15 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 Gene3D G3DSA:1.20.5.1030 76 134 2.0E-23 T 11-11-2016 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 81 133 4.2E-19 T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 Hamap MF_00422 Protein translocase subunit SecE [secE]. 77 132 12.222 T 11-11-2016 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 82 110 - T 11-11-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ATY42_RS18110 9cd1fe5faad12d8b401d3cf83617ad3d 136 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 81 134 5.8E-21 T 11-11-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 ATY42_RS09550 50b064f6ecaccf3e047c33932146fc1e 153 Gene3D G3DSA:3.10.129.10 8 150 6.9E-54 T 11-11-2016 IPR029069 HotDog domain ATY42_RS09550 50b064f6ecaccf3e047c33932146fc1e 153 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 10 152 34.071 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS09550 50b064f6ecaccf3e047c33932146fc1e 153 Pfam PF07977 FabA-like domain 19 144 1.2E-39 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS09550 50b064f6ecaccf3e047c33932146fc1e 153 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 10 149 2.8E-60 T 11-11-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS09550 50b064f6ecaccf3e047c33932146fc1e 153 SUPERFAMILY SSF54637 12 150 9.61E-45 T 11-11-2016 IPR029069 HotDog domain ATY42_RS19265 4a6ee2d142af82d14a6ec50ce3da2461 361 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 361 2.7E-130 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS19265 4a6ee2d142af82d14a6ec50ce3da2461 361 Pfam PF00953 Glycosyl transferase family 4 99 285 2.5E-33 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ATY42_RS19265 4a6ee2d142af82d14a6ec50ce3da2461 361 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS19265 4a6ee2d142af82d14a6ec50ce3da2461 361 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 359 24.603 T 11-11-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS19265 4a6ee2d142af82d14a6ec50ce3da2461 361 ProSitePatterns PS01348 MraY family signature 2. 190 201 - T 11-11-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 Gene3D G3DSA:2.40.10.240 64 139 1.4E-12 T 11-11-2016 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 345 46.033 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 Pfam PF02547 Queuosine biosynthesis protein 4 344 1.9E-129 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 3 344 9.9E-129 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 SUPERFAMILY SSF111337 2 344 3.92E-130 T 11-11-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 Gene3D G3DSA:3.40.1780.10 2 62 4.6E-98 T 11-11-2016 ATY42_RS12315 73027c9b3338199054caa3a154a581c9 356 Gene3D G3DSA:3.40.1780.10 177 344 4.6E-98 T 11-11-2016 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 Gene3D G3DSA:3.30.420.40 1 249 5.0E-49 T 11-11-2016 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 SUPERFAMILY SSF53067 252 494 2.5E-53 T 11-11-2016 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 248 3.7E-55 T 11-11-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 TIGRFAM TIGR01312 XylB: xylulokinase 5 487 4.9E-158 T 11-11-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 373 - T 11-11-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 441 2.2E-31 T 11-11-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 PIRSF PIRSF000538 1 497 4.0E-111 T 11-11-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 Gene3D G3DSA:3.30.420.40 252 489 7.3E-44 T 11-11-2016 ATY42_RS14515 d6ba31fc73908c98424efdab64d33809 497 SUPERFAMILY SSF53067 1 248 1.85E-54 T 11-11-2016 ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 Pfam PF02153 Prephenate dehydrogenase 44 252 4.9E-25 T 11-11-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 Gene3D G3DSA:3.30.70.260 297 361 1.4E-8 T 11-11-2016 ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 Gene3D G3DSA:3.40.50.720 5 160 2.7E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 Gene3D G3DSA:1.10.3660.10 162 259 1.0E-15 T 11-11-2016 ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 Pfam PF01842 ACT domain 297 351 5.1E-7 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 SUPERFAMILY SSF51735 7 151 1.79E-23 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 SUPERFAMILY SSF55021 296 362 5.64E-10 T 11-11-2016 ATY42_RS09870 0cb8ae43efd34334b36119c279164750 373 SUPERFAMILY SSF48179 155 254 1.7E-18 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 SUPERFAMILY SSF69336 1221 1476 3.01E-86 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Pfam PF04898 Glutamate synthase central domain 468 750 3.3E-99 T 11-11-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Gene3D G3DSA:3.20.20.70 825 1205 5.8E-164 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 SUPERFAMILY SSF51395 457 1205 1.37E-246 T 11-11-2016 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Pfam PF01493 GXGXG motif 1247 1430 2.0E-75 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Gene3D G3DSA:3.20.20.70 452 788 2.3E-91 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 SUPERFAMILY SSF56235 25 440 7.72E-130 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Pfam PF00310 Glutamine amidotransferases class-II 25 437 3.7E-154 T 11-11-2016 IPR017932 Glutamine amidotransferase type 2 domain ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Gene3D G3DSA:3.60.20.10 25 446 7.3E-146 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Gene3D G3DSA:2.160.20.60 1225 1476 1.5E-90 T 11-11-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 ATY42_RS00775 b3ccd43d921d339e73bbec6ab3778d2c 1490 Pfam PF01645 Conserved region in glutamate synthase 806 1169 4.2E-147 T 11-11-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 Pfam PF08402 TOBE domain 296 375 6.9E-20 T 11-11-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 SUPERFAMILY SSF52540 20 257 3.19E-83 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.1E-122 T 11-11-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 SUPERFAMILY SSF50331 253 375 1.23E-14 T 11-11-2016 IPR008995 Molybdate/tungstate binding, C-terminal ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 Pfam PF00005 ABC transporter 36 177 4.6E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 SMART SM00382 44 232 2.2E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS13770 b80a6309bcc5d69fd291bcf2c3058d31 375 Gene3D G3DSA:3.40.50.300 14 255 4.6E-78 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 Gene3D G3DSA:2.102.10.10 50 206 4.0E-32 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 9 44 2.7E-15 T 11-11-2016 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 Pfam PF00355 Rieske [2Fe-2S] domain 109 182 1.5E-9 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 SUPERFAMILY SSF50022 34 199 1.25E-38 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 Gene3D G3DSA:1.20.5.510 13 44 2.4E-7 T 11-11-2016 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 13 198 2.1E-68 T 11-11-2016 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 157 169 2.6E-5 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ATY42_RS13680 e3cb48cff683272c51ed8bc13c3ff816 214 PRINTS PR00162 Rieske 2Fe-2S subunit signature 126 137 2.6E-5 T 11-11-2016 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ATY42_RS18965 5048c46680cf6d7f01e15500eff9fc5e 305 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 28 298 4.5E-62 T 11-11-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 ATY42_RS18965 5048c46680cf6d7f01e15500eff9fc5e 305 Gene3D G3DSA:3.60.130.10 22 305 1.7E-89 T 11-11-2016 ATY42_RS18965 5048c46680cf6d7f01e15500eff9fc5e 305 SUPERFAMILY SSF51197 26 304 4.35E-84 T 11-11-2016 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 12 304 31.616 T 11-11-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 13 201 4.8E-54 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 SUPERFAMILY SSF53850 12 228 2.3E-61 T 11-11-2016 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 Gene3D G3DSA:3.40.190.10 10 145 3.3E-45 T 11-11-2016 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 162 183 - T 11-11-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 206 302 5.7E-19 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 Pfam PF01634 ATP phosphoribosyltransferase 60 224 1.6E-44 T 11-11-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 Pfam PF08029 HisG, C-terminal domain 230 301 2.6E-8 T 11-11-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ATY42_RS11020 2b28f92914cfe1119ab3b4885b256f24 304 Gene3D G3DSA:3.30.70.120 232 302 1.8E-4 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 SUPERFAMILY SSF49503 184 308 2.39E-53 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 SUPERFAMILY SSF49503 126 153 2.39E-53 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 Gene3D G3DSA:1.10.287.90 37 125 3.0E-22 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 134 261 1.0E-38 T 11-11-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 108 128 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 108 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 130 149 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 182 203 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 244 261 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 226 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 PRINTS PR01166 Cytochrome c oxidase subunit II signature 226 243 3.0E-41 T 11-11-2016 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 36 118 4.1E-13 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 SUPERFAMILY SSF81464 36 128 1.14E-22 T 11-11-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 207 255 - T 11-11-2016 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 Gene3D G3DSA:2.60.40.420 126 280 3.2E-55 T 11-11-2016 IPR008972 Cupredoxin ATY42_RS20865 704da5bd774083d1814ea6393d82190c 317 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 52 271 1.8E-58 T 11-11-2016 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 Pfam PF13347 MFS/sugar transport protein 15 275 3.1E-54 T 11-11-2016 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 Pfam PF13347 MFS/sugar transport protein 305 473 6.7E-31 T 11-11-2016 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 13 272 2.7E-69 T 11-11-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 Gene3D G3DSA:1.20.1250.20 19 211 7.0E-10 T 11-11-2016 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 Gene3D G3DSA:1.20.1250.20 307 467 1.1E-12 T 11-11-2016 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 Gene3D G3DSA:1.20.1250.20 237 272 1.1E-12 T 11-11-2016 ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 SUPERFAMILY SSF103473 11 263 7.19E-28 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS22280 a5777bd535e88724c4d1cd54b15ec7a9 495 SUPERFAMILY SSF103473 304 473 7.19E-28 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS00360 b57d4da3c49f77351f3afd6a541d74fc 313 Pfam PF05661 Protein of unknown function (DUF808) 4 297 5.1E-111 T 11-11-2016 IPR008526 Inner membrane protein YedI ATY42_RS00360 b57d4da3c49f77351f3afd6a541d74fc 313 PIRSF PIRSF016660 1 311 7.5E-112 T 11-11-2016 IPR008526 Inner membrane protein YedI ATY42_RS09385 898b0fb574412cb766ad692c72a5e7d9 128 SUPERFAMILY SSF54593 1 67 5.64E-10 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS09385 898b0fb574412cb766ad692c72a5e7d9 128 Gene3D G3DSA:3.10.180.10 1 53 1.2E-10 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS09385 898b0fb574412cb766ad692c72a5e7d9 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 37 3.8E-7 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 Gene3D G3DSA:1.20.120.140 262 343 6.2E-27 T 11-11-2016 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 SMART SM00963 238 317 7.0E-19 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 260 533 62.789 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 PRINTS PR01217 Proline rich extensin signature 170 195 5.0E-9 T 11-11-2016 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 PRINTS PR01217 Proline rich extensin signature 76 88 5.0E-9 T 11-11-2016 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 PRINTS PR01217 Proline rich extensin signature 32 44 5.0E-9 T 11-11-2016 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 PRINTS PR01217 Proline rich extensin signature 152 169 5.0E-9 T 11-11-2016 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 PRINTS PR01217 Proline rich extensin signature 112 133 5.0E-9 T 11-11-2016 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 Gene3D G3DSA:3.40.50.300 344 532 1.3E-76 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 260 532 2.8E-100 T 11-11-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 Pfam PF00448 SRP54-type protein, GTPase domain 332 532 1.4E-72 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 SMART SM00382 331 511 1.8E-5 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 Pfam PF02881 SRP54-type protein, helical bundle domain 249 311 6.3E-11 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 SMART SM00962 332 533 1.5E-109 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 506 519 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS15770 3f2ce0a6ab6fc32cd5adc7b8fd139986 538 SUPERFAMILY SSF52540 283 528 7.87E-46 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 SMART SM00387 342 450 4.7E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 SUPERFAMILY SSF55874 294 450 5.63E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 447 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 3.4E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 Gene3D G3DSA:3.30.565.10 305 449 1.1E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 SUPERFAMILY SSF47384 229 299 7.65E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 SMART SM00388 234 301 0.0073 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS03270 30f04dcbfbed07c2e003c040ab9abcc0 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 449 1.2E-14 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS11235 8f5b91c9e906c9428441dbc37ad747dc 1237 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 334 503 3.4E-109 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11235 8f5b91c9e906c9428441dbc37ad747dc 1237 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 842 992 1.8E-72 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11235 8f5b91c9e906c9428441dbc37ad747dc 1237 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 504 706 3.2E-131 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS04005 dd34e7ceac0bd553769e08370118a1dd 141 Gene3D G3DSA:3.40.50.10110 1 140 6.3E-37 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ATY42_RS04005 dd34e7ceac0bd553769e08370118a1dd 141 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 137 4.4E-33 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ATY42_RS04005 dd34e7ceac0bd553769e08370118a1dd 141 SUPERFAMILY SSF102400 1 140 4.97E-36 T 11-11-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 ATY42_RS20520 06c766f037a1257fb2f2c5bfdb5e7ffe 174 Gene3D G3DSA:3.40.50.920 46 168 3.1E-47 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS20520 06c766f037a1257fb2f2c5bfdb5e7ffe 174 Gene3D G3DSA:3.40.50.970 2 42 7.1E-8 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS20520 06c766f037a1257fb2f2c5bfdb5e7ffe 174 SUPERFAMILY SSF52518 2 52 1.28E-7 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS20520 06c766f037a1257fb2f2c5bfdb5e7ffe 174 Pfam PF02780 Transketolase, C-terminal domain 46 163 4.4E-39 T 11-11-2016 IPR033248 Transketolase, C-terminal domain ATY42_RS20520 06c766f037a1257fb2f2c5bfdb5e7ffe 174 SUPERFAMILY SSF52922 38 170 3.4E-41 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS15240 1d393e58e20b5dd5d01366fa4bd7388c 215 PIRSF PIRSF029287 1 205 3.0E-31 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 ATY42_RS15240 1d393e58e20b5dd5d01366fa4bd7388c 215 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 9 125 9.1E-29 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 ATY42_RS15240 1d393e58e20b5dd5d01366fa4bd7388c 215 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 9 143 3.5E-40 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 ATY42_RS15240 1d393e58e20b5dd5d01366fa4bd7388c 215 Gene3D G3DSA:3.40.1730.10 8 202 1.0E-40 T 11-11-2016 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 PRINTS PR00061 Ribosomal protein L19 signature 38 67 6.3E-36 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 PRINTS PR00061 Ribosomal protein L19 signature 92 117 6.3E-36 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 PRINTS PR00061 Ribosomal protein L19 signature 8 37 6.3E-36 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 6 118 27.716 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 Pfam PF01245 Ribosomal protein L19 8 116 3.0E-45 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 117 7.6E-44 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 SUPERFAMILY SSF50104 10 121 1.91E-41 T 11-11-2016 IPR008991 Translation protein SH3-like domain ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 PIRSF PIRSF002191 1 135 2.0E-47 T 11-11-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS06525 63b1e2c8c767148fe064704373dae833 135 ProSitePatterns PS01015 Ribosomal protein L19 signature. 90 105 - T 11-11-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS16250 51b179030add87b216607f43ae81f45d 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 41.238 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16250 51b179030add87b216607f43ae81f45d 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16250 51b179030add87b216607f43ae81f45d 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 38 177 2.2E-76 T 11-11-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16250 51b179030add87b216607f43ae81f45d 184 SUPERFAMILY SSF56770 35 179 8.11E-66 T 11-11-2016 ATY42_RS16250 51b179030add87b216607f43ae81f45d 184 Gene3D G3DSA:3.40.50.700 47 175 1.7E-32 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16250 51b179030add87b216607f43ae81f45d 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 4.9E-23 T 11-11-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16465 a3577557281de64177562780b49f5b62 189 Gene3D G3DSA:2.70.40.10 3 188 2.0E-68 T 11-11-2016 IPR029054 dUTPase-like ATY42_RS16465 a3577557281de64177562780b49f5b62 189 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 189 28.045 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 ATY42_RS16465 a3577557281de64177562780b49f5b62 189 Pfam PF00692 dUTPase 82 184 5.9E-7 T 11-11-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 ATY42_RS16465 a3577557281de64177562780b49f5b62 189 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 5 188 1.1E-47 T 11-11-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 ATY42_RS16465 a3577557281de64177562780b49f5b62 189 SUPERFAMILY SSF51283 3 188 5.76E-53 T 11-11-2016 IPR029054 dUTPase-like ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 Pfam PF01204 Trehalase 62 536 3.1E-169 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 ProSitePatterns PS00928 Trehalase signature 2. 450 459 - T 11-11-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 306 323 8.4E-42 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 272 289 8.4E-42 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 338 355 8.4E-42 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 443 459 8.4E-42 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 197 215 8.4E-42 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 PRINTS PR00744 Glycosyl hydrolase family 37 signature 520 533 8.4E-42 T 11-11-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 Hamap MF_01060 Periplasmic trehalase [treA]. 1 538 83.91 T 11-11-2016 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 SUPERFAMILY SSF48208 45 536 6.26E-157 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS20235 960c6675e82c9ebadbcdd20684340929 557 ProSitePatterns PS00927 Trehalase signature 1. 155 168 - T 11-11-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 ATY42_RS23260 934345b5e0184a83f98fc4a721bbb700 261 Gene3D G3DSA:1.20.1540.10 22 194 1.3E-16 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS23260 934345b5e0184a83f98fc4a721bbb700 261 Pfam PF01694 Rhomboid family 57 195 2.0E-18 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS23260 934345b5e0184a83f98fc4a721bbb700 261 SUPERFAMILY SSF144091 18 198 8.11E-27 T 11-11-2016 ATY42_RS13575 7b5d968641bcf00d4e684051a6156b8e 611 SUPERFAMILY SSF56436 335 610 3.77E-64 T 11-11-2016 IPR016187 C-type lectin fold ATY42_RS13575 7b5d968641bcf00d4e684051a6156b8e 611 Gene3D G3DSA:3.90.1580.10 332 610 3.8E-67 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS13575 7b5d968641bcf00d4e684051a6156b8e 611 Pfam PF03781 Sulfatase-modifying factor enzyme 1 336 609 1.3E-65 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 SUPERFAMILY SSF53067 235 294 1.07E-21 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 SUPERFAMILY SSF53067 332 450 1.07E-21 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 Pfam PF00012 Hsp70 protein 150 277 2.2E-7 T 11-11-2016 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 Gene3D G3DSA:3.30.420.40 2 42 3.5E-26 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 Gene3D G3DSA:3.30.420.40 111 241 3.5E-26 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 Gene3D G3DSA:3.30.420.40 242 265 8.5E-10 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 Gene3D G3DSA:3.30.420.40 378 427 8.5E-10 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 SUPERFAMILY SSF53067 111 229 9.59E-20 T 11-11-2016 ATY42_RS09200 a50ec56282af4fdc968f60e703d00ec2 458 SUPERFAMILY SSF53067 2 42 9.59E-20 T 11-11-2016 ATY42_RS10750 347abf63bb8017c37ba24eb77311aea3 235 Pfam PF03466 LysR substrate binding domain 26 227 1.9E-42 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS10750 347abf63bb8017c37ba24eb77311aea3 235 Gene3D G3DSA:3.40.190.10 166 196 9.3E-4 T 11-11-2016 ATY42_RS10750 347abf63bb8017c37ba24eb77311aea3 235 Gene3D G3DSA:3.40.190.10 27 165 3.9E-31 T 11-11-2016 ATY42_RS10750 347abf63bb8017c37ba24eb77311aea3 235 SUPERFAMILY SSF53850 27 227 2.41E-39 T 11-11-2016 ATY42_RS07360 e29359d96f6b845665e3017137906df0 195 Gene3D G3DSA:3.40.630.30 20 166 1.7E-13 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS07360 e29359d96f6b845665e3017137906df0 195 SUPERFAMILY SSF55729 19 138 2.48E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS21130 aff4fe7928ee47dc386a79ef2716d73f 144 SMART SM00450 42 139 1.3E-23 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS21130 aff4fe7928ee47dc386a79ef2716d73f 144 Pfam PF00581 Rhodanese-like domain 44 135 5.0E-18 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS21130 aff4fe7928ee47dc386a79ef2716d73f 144 Gene3D G3DSA:3.40.250.10 26 143 1.3E-28 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS21130 aff4fe7928ee47dc386a79ef2716d73f 144 SUPERFAMILY SSF52821 23 143 1.11E-29 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 Gene3D G3DSA:3.30.460.10 1 122 1.3E-30 T 11-11-2016 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 Pfam PF01743 Poly A polymerase head domain 3 123 2.5E-18 T 11-11-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 PIRSF PIRSF000813 1 410 3.5E-192 T 11-11-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 213 1.3E-13 T 11-11-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 SUPERFAMILY SSF81301 1 120 1.31E-28 T 11-11-2016 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 Pfam PF01966 HD domain 231 333 1.9E-5 T 11-11-2016 IPR006674 HD domain ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 Gene3D G3DSA:1.10.3090.10 123 362 2.0E-52 T 11-11-2016 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 SUPERFAMILY SSF81891 121 403 7.72E-55 T 11-11-2016 ATY42_RS19640 b3e011ffcec330f6bc76ec0da6fdb488 410 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 409 51.871 T 11-11-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 ATY42_RS14125 b1ab6a3c964254cf37f753999d27e7b3 163 Pfam PF00593 TonB dependent receptor 7 158 7.2E-15 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14125 b1ab6a3c964254cf37f753999d27e7b3 163 Gene3D G3DSA:2.40.170.20 2 160 3.5E-35 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14125 b1ab6a3c964254cf37f753999d27e7b3 163 SUPERFAMILY SSF56935 6 160 2.88E-27 T 11-11-2016 ATY42_RS00050 27fd7119edb98e1c03cca56e63835065 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 135 3.9E-25 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 SUPERFAMILY SSF52518 368 559 1.29E-66 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 Gene3D G3DSA:3.40.50.1220 190 357 1.3E-54 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 386 534 1.6E-48 T 11-11-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 558 1.5E-205 T 11-11-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 SUPERFAMILY SSF52518 10 190 1.51E-60 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 332 4.7E-43 T 11-11-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 SUPERFAMILY SSF52467 195 353 1.73E-53 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 174 3.5E-57 T 11-11-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 Gene3D G3DSA:3.40.50.970 358 565 5.1E-72 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 423 442 - T 11-11-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ATY42_RS04540 49accfdc20d2705a8e83e1b77cbbc51b 573 Gene3D G3DSA:3.40.50.970 10 176 1.7E-73 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS10980 a18e6a2e51dab6a7a2323c5107c3ab54 104 Gene3D G3DSA:3.30.70.900 2 100 1.5E-44 T 11-11-2016 ATY42_RS10980 a18e6a2e51dab6a7a2323c5107c3ab54 104 SUPERFAMILY SSF54909 1 102 1.66E-20 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS10980 a18e6a2e51dab6a7a2323c5107c3ab54 104 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 102 9.4E-36 T 11-11-2016 IPR009799 EthD domain ATY42_RS10980 a18e6a2e51dab6a7a2323c5107c3ab54 104 Pfam PF07110 EthD domain 18 92 1.5E-7 T 11-11-2016 IPR009799 EthD domain ATY42_RS08110 64242d71cf58496bbf5b966d8158dfeb 286 Pfam PF13276 HTH-like domain 52 103 3.0E-7 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS08110 64242d71cf58496bbf5b966d8158dfeb 286 Pfam PF13683 Integrase core domain 204 269 1.4E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS08110 64242d71cf58496bbf5b966d8158dfeb 286 Gene3D G3DSA:3.30.420.10 114 270 3.1E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08110 64242d71cf58496bbf5b966d8158dfeb 286 SUPERFAMILY SSF53098 113 274 5.44E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21785 0c03652774191518a1fd9c106168b687 299 Pfam PF02219 Methylenetetrahydrofolate reductase 51 223 3.3E-9 T 11-11-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ATY42_RS21785 0c03652774191518a1fd9c106168b687 299 SUPERFAMILY SSF51730 17 282 6.28E-44 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like ATY42_RS21785 0c03652774191518a1fd9c106168b687 299 Gene3D G3DSA:3.20.20.220 24 282 1.1E-35 T 11-11-2016 IPR029041 FAD-linked oxidoreductase-like ATY42_RS18200 a50a9c8284c9220cb3d39e1bb535c0df 260 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 227 6.4E-94 T 11-11-2016 IPR022488 Polyphosphate kinase-2-related ATY42_RS18200 a50a9c8284c9220cb3d39e1bb535c0df 260 Gene3D G3DSA:3.40.50.300 3 227 4.5E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18200 a50a9c8284c9220cb3d39e1bb535c0df 260 PIRSF PIRSF028756 1 253 1.1E-116 T 11-11-2016 IPR016898 Polyphosphate kinase 2 ATY42_RS18200 a50a9c8284c9220cb3d39e1bb535c0df 260 SUPERFAMILY SSF52540 35 222 7.62E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18200 a50a9c8284c9220cb3d39e1bb535c0df 260 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 226 1.1E-104 T 11-11-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 ATY42_RS02305 0816e1910a3ce7d53b9bbb2635ad8ee6 286 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 11-11-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 ATY42_RS02305 0816e1910a3ce7d53b9bbb2635ad8ee6 286 Pfam PF01163 RIO1 family 31 219 2.0E-34 T 11-11-2016 ATY42_RS02305 0816e1910a3ce7d53b9bbb2635ad8ee6 286 Gene3D G3DSA:3.30.200.20 17 125 5.2E-9 T 11-11-2016 ATY42_RS02305 0816e1910a3ce7d53b9bbb2635ad8ee6 286 SMART SM00090 2 235 4.6E-9 T 11-11-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|Reactome: R-HSA-6791226 ATY42_RS02305 0816e1910a3ce7d53b9bbb2635ad8ee6 286 SUPERFAMILY SSF56112 19 196 2.04E-17 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS02305 0816e1910a3ce7d53b9bbb2635ad8ee6 286 Gene3D G3DSA:1.10.510.10 139 217 9.2E-18 T 11-11-2016 ATY42_RS15485 b95573b6344fe116f332fa52219cd931 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS15485 b95573b6344fe116f332fa52219cd931 411 Pfam PF01610 Transposase 155 390 1.5E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 Gene3D G3DSA:1.10.760.10 28 129 4.7E-30 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 PRINTS PR00604 Class IA and IB cytochrome C signature 52 67 4.2E-12 T 11-11-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 PRINTS PR00604 Class IA and IB cytochrome C signature 120 128 4.2E-12 T 11-11-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 PRINTS PR00604 Class IA and IB cytochrome C signature 83 99 4.2E-12 T 11-11-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 PRINTS PR00604 Class IA and IB cytochrome C signature 40 47 4.2E-12 T 11-11-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 PRINTS PR00604 Class IA and IB cytochrome C signature 103 113 4.2E-12 T 11-11-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 SUPERFAMILY SSF46626 27 130 8.33E-24 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS15005 542c68e1210067f7cbe3f756e9117e50 130 Pfam PF00034 Cytochrome c 30 130 3.3E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS20455 97b914d3b892030122ffc20674353d6c 168 Pfam PF01899 Na+/H+ ion antiporter subunit 19 166 2.2E-41 T 11-11-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ATY42_RS20455 97b914d3b892030122ffc20674353d6c 168 PIRSF PIRSF019239 8 168 2.3E-37 T 11-11-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Gene3D G3DSA:3.40.1390.10 6 81 3.8E-20 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 SUPERFAMILY SSF63418 2 95 3.4E-21 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Gene3D G3DSA:3.40.1190.10 83 319 3.2E-64 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 SUPERFAMILY SSF53244 324 433 1.53E-25 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Pfam PF01225 Mur ligase family, catalytic domain 24 93 9.4E-8 T 11-11-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 SUPERFAMILY SSF53623 102 320 1.26E-50 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 402 2.2E-9 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Gene3D G3DSA:3.90.190.20 322 433 7.7E-44 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Gene3D G3DSA:3.90.190.20 469 494 7.7E-44 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 493 32.448 T 11-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 Pfam PF08245 Mur ligase middle domain 107 302 2.9E-42 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS19270 6cf06dc4bf558a3c14a6c7182b46de65 503 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 30 431 6.4E-124 T 11-11-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS21240 4eda80933657f99492ce8ceaff2f9bf1 458 Pfam PF05598 Transposase domain (DUF772) 59 132 1.8E-15 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21240 4eda80933657f99492ce8ceaff2f9bf1 458 Pfam PF01609 Transposase DDE domain 281 416 1.9E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS09765 4fa988bf2bf1ec57332139effa98baa2 137 Pfam PF00665 Integrase core domain 7 99 2.1E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS09765 4fa988bf2bf1ec57332139effa98baa2 137 Gene3D G3DSA:3.30.420.10 8 135 6.6E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09765 4fa988bf2bf1ec57332139effa98baa2 137 SUPERFAMILY SSF53098 7 135 1.2E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09765 4fa988bf2bf1ec57332139effa98baa2 137 ProSitePatterns PS01043 Transposases, IS30 family, signature. 87 103 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 Gene3D G3DSA:3.50.50.60 283 324 8.6E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 Gene3D G3DSA:3.50.50.60 14 187 8.6E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 Pfam PF01494 FAD binding domain 14 319 1.1E-17 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 14 36 2.1E-7 T 11-11-2016 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 306 2.1E-7 T 11-11-2016 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 2.1E-7 T 11-11-2016 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 SUPERFAMILY SSF51905 278 345 9.02E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS21685 11e295d99a7f5a964f13a45f3743f55a 449 SUPERFAMILY SSF51905 14 182 9.02E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 188 209 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 141 161 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 100 122 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 341 352 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 164 183 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 237 261 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 279 306 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 308 319 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 215 234 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 Gene3D G3DSA:3.20.20.150 10 443 2.6E-193 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 SUPERFAMILY SSF51658 11 443 2.49E-161 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 1.8E-210 T 11-11-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS14510 9d96c98baef94bafe1b1ed0207e517f0 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.411 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 188 209 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 141 161 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 100 122 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 341 352 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 164 183 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 237 261 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 279 306 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 308 319 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 PRINTS PR00688 Xylose isomerase signature 215 234 4.4E-79 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 Gene3D G3DSA:3.20.20.150 10 443 2.6E-193 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 SUPERFAMILY SSF51658 11 443 2.49E-161 T 11-11-2016 IPR013022 Xylose isomerase-like, TIM barrel domain ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 12 443 1.8E-210 T 11-11-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS22195 9d96c98baef94bafe1b1ed0207e517f0 445 Hamap MF_00455 Xylose isomerase [xylA]. 19 443 53.411 T 11-11-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 ATY42_RS17500 f026cc28bac3e77934e7bbc00fd58be0 165 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 7 143 1.1E-24 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS17500 f026cc28bac3e77934e7bbc00fd58be0 165 Pfam PF05638 Type VI secretion system effector, Hcp 5 137 1.1E-35 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS17500 f026cc28bac3e77934e7bbc00fd58be0 165 Gene3D G3DSA:2.30.110.20 2 159 9.9E-50 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS17500 f026cc28bac3e77934e7bbc00fd58be0 165 SUPERFAMILY SSF141452 1 159 1.03E-44 T 11-11-2016 IPR008514 Type VI secretion system effector, Hcp ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 SUPERFAMILY SSF53244 296 428 7.51E-27 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 Gene3D G3DSA:3.90.190.20 296 429 7.2E-33 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 SUPERFAMILY SSF53623 5 293 2.62E-83 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 Gene3D G3DSA:3.40.1190.10 5 293 6.6E-87 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 426 1.2E-92 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 Pfam PF08245 Mur ligase middle domain 48 272 3.1E-9 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS18530 de375950b0de7b0ccded3ced0e71314f 432 PIRSF PIRSF001563 1 431 2.5E-98 T 11-11-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ATY42_RS18220 08c3011468c51a431ba199a03b435e28 425 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 22 280 5.8E-71 T 11-11-2016 IPR017039 Virulence factor BrkB ATY42_RS18220 08c3011468c51a431ba199a03b435e28 425 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 14 309 21.221 T 11-11-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial ATY42_RS18220 08c3011468c51a431ba199a03b435e28 425 Pfam PF03631 Virulence factor BrkB 33 279 6.1E-56 T 11-11-2016 IPR017039 Virulence factor BrkB ATY42_RS06755 06da607227f2e78ebd1a59c7875dab1c 272 Gene3D G3DSA:3.40.50.1820 58 261 5.3E-44 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS06755 06da607227f2e78ebd1a59c7875dab1c 272 SUPERFAMILY SSF53474 37 249 1.19E-25 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS06755 06da607227f2e78ebd1a59c7875dab1c 272 Pfam PF07859 alpha/beta hydrolase fold 80 216 5.1E-10 T 11-11-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 339 351 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 375 35.88 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 SUPERFAMILY SSF54211 169 253 2.28E-30 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 143 1.5E-34 T 11-11-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 147 1.8E-20 T 11-11-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Gene3D G3DSA:3.30.230.40 169 255 2.1E-37 T 11-11-2016 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 SUPERFAMILY SSF54211 278 362 4.05E-30 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 11-11-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 357 2.9E-63 T 11-11-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Gene3D G3DSA:3.30.230.40 278 375 2.5E-31 T 11-11-2016 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 164 1.4E-69 T 11-11-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Gene3D G3DSA:3.40.50.1000 3 155 5.2E-33 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 1 375 52.988 T 11-11-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 SUPERFAMILY SSF56784 1 148 2.46E-31 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS11035 f3d4857c2747d9056c656890ed314354 375 Pfam PF13242 HAD-hyrolase-like 102 153 4.1E-5 T 11-11-2016 ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 SUPERFAMILY SSF52922 285 412 5.97E-7 T 11-11-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 752 939 2.6E-22 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 SUPERFAMILY SSF53323 744 962 1.7E-29 T 11-11-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 Gene3D G3DSA:3.40.920.10 745 944 1.6E-19 T 11-11-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 SUPERFAMILY SSF52518 458 646 5.21E-12 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 SUPERFAMILY SSF52518 67 214 2.62E-12 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS22630 deeb005ff908a5a9a0139259f5f94362 1235 Gene3D G3DSA:3.40.50.970 513 640 2.2E-7 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 SUPERFAMILY SSF81665 44 107 1.7E-7 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 SUPERFAMILY SSF81665 211 302 1.7E-7 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Gene3D G3DSA:2.70.150.10 55 211 3.8E-24 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 SUPERFAMILY SSF81653 116 210 1.7E-21 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 530 7.9E-34 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Gene3D G3DSA:3.40.1110.10 322 448 6.1E-45 T 11-11-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 344 1.2E-32 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 371 606 3.5E-41 T 11-11-2016 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Gene3D G3DSA:3.40.50.1000 449 559 1.2E-34 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Gene3D G3DSA:3.40.50.1000 292 321 1.2E-34 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Pfam PF00122 E1-E2 ATPase 74 299 3.3E-42 T 11-11-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 Reactome: R-HSA-936837 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 SUPERFAMILY SSF56784 304 319 2.56E-37 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 SUPERFAMILY SSF56784 346 564 2.56E-37 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 17 680 39.959 T 11-11-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 2.1E-22 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 2.1E-22 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 2.1E-22 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 157 171 2.1E-22 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 2.1E-22 T 11-11-2016 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 14 676 9.0E-286 T 11-11-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ATY42_RS19355 b049325f4b782e308582202ec395bc78 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 11-11-2016 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ATY42_RS10895 eef915e204e09f5b78d6beb5d63e8272 243 Gene3D G3DSA:1.20.144.10 58 216 4.1E-28 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS10895 eef915e204e09f5b78d6beb5d63e8272 243 Pfam PF01569 PAP2 superfamily 108 217 1.0E-18 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS10895 eef915e204e09f5b78d6beb5d63e8272 243 SMART SM00014 104 213 3.7E-17 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS10895 eef915e204e09f5b78d6beb5d63e8272 243 SUPERFAMILY SSF48317 30 228 1.09E-37 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 SUPERFAMILY SSF52540 42 353 1.49E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Pfam PF00448 SRP54-type protein, GTPase domain 101 295 1.6E-73 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.879 T 11-11-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 SMART SM00963 1 86 4.1E-35 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.1E-20 T 11-11-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 SUPERFAMILY SSF47446 328 430 8.01E-37 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Pfam PF02978 Signal peptide binding domain 328 427 1.0E-32 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Gene3D G3DSA:1.10.260.30 328 431 3.6E-39 T 11-11-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 428 9.2E-176 T 11-11-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 SMART SM00962 100 296 4.2E-114 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 SMART SM00382 99 301 6.5E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Gene3D G3DSA:3.40.50.300 94 297 2.8E-75 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06485 101bdd3b72d31dfbf06e159d34a808ff 458 Gene3D G3DSA:1.20.120.140 2 88 1.1E-32 T 11-11-2016 ATY42_RS12925 3840d703df3b420a529c2014c6d0bcd4 174 Pfam PF03748 Flagellar basal body-associated protein FliL 72 174 5.7E-24 T 11-11-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 ATY42_RS20845 32d2e858fba7afd0c379a126dfd3e7fa 72 Pfam PF11137 Protein of unknown function (DUF2909) 8 65 1.5E-22 T 11-11-2016 IPR021313 Protein of unknown function DUF2909 ATY42_RS14655 bcfd27b626e9150e4f7f2cd8866d732f 76 SUPERFAMILY SSF53955 9 75 5.62E-17 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS14655 bcfd27b626e9150e4f7f2cd8866d732f 76 Gene3D G3DSA:1.10.530.10 9 75 4.2E-19 T 11-11-2016 ATY42_RS21690 66d55905621a584c6dfe8af8a6813046 335 SUPERFAMILY SSF55298 232 332 3.03E-8 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS21690 66d55905621a584c6dfe8af8a6813046 335 Gene3D G3DSA:3.30.1330.40 232 332 1.6E-6 T 11-11-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like ATY42_RS08400 e4641c83891bee0ac0744b2074cda444 250 Gene3D G3DSA:1.20.910.10 3 241 4.4E-99 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS08400 e4641c83891bee0ac0744b2074cda444 250 Hamap MF_00654 Pyrroloquinoline-quinone synthase [pqqC]. 1 250 115.609 T 11-11-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 ATY42_RS08400 e4641c83891bee0ac0744b2074cda444 250 Pfam PF03070 TENA/THI-4/PQQC family 12 222 2.0E-58 T 11-11-2016 IPR004305 Thiaminase-2/PQQC ATY42_RS08400 e4641c83891bee0ac0744b2074cda444 250 SUPERFAMILY SSF48613 4 231 8.9E-61 T 11-11-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ATY42_RS08400 e4641c83891bee0ac0744b2074cda444 250 TIGRFAM TIGR02111 PQQ_syn_pqqC: coenzyme PQQ biosynthesis protein C 5 242 7.7E-127 T 11-11-2016 IPR011845 Coenzyme PQQ biosynthesis protein C GO:0018189|GO:0055114 MetaCyc: PWY-6420 ATY42_RS12160 8b55d89e9c48f845ff1a066d16a0b830 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-11-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 ATY42_RS12160 8b55d89e9c48f845ff1a066d16a0b830 260 Gene3D G3DSA:3.90.226.10 4 258 5.7E-90 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS12160 8b55d89e9c48f845ff1a066d16a0b830 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 5.3E-67 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS12160 8b55d89e9c48f845ff1a066d16a0b830 260 SUPERFAMILY SSF52096 2 260 4.8E-88 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 Pfam PF01025 GrpE 11 170 4.6E-47 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 SUPERFAMILY SSF51064 116 171 2.62E-18 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 Gene3D G3DSA:3.90.20.20 18 109 1.8E-25 T 11-11-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 Gene3D G3DSA:2.30.22.10 114 171 2.0E-24 T 11-11-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 SUPERFAMILY SSF58014 20 114 6.28E-22 T 11-11-2016 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 ProSitePatterns PS01071 grpE protein signature. 125 168 - T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 PRINTS PR00773 GrpE protein signature 42 58 5.8E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 PRINTS PR00773 GrpE protein signature 70 85 5.8E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 PRINTS PR00773 GrpE protein signature 149 168 5.8E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 PRINTS PR00773 GrpE protein signature 122 137 5.8E-24 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS09850 bb27d43b3ae33c7fa151d269d3bbf164 172 Hamap MF_01151 Protein GrpE [grpE]. 3 170 19.475 T 11-11-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ATY42_RS01860 ac962317222d3691ba2fad6d48d9c3a8 293 Pfam PF07676 WD40-like Beta Propeller Repeat 138 174 5.9E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS01860 ac962317222d3691ba2fad6d48d9c3a8 293 Pfam PF07676 WD40-like Beta Propeller Repeat 81 120 1.7E-11 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS01860 ac962317222d3691ba2fad6d48d9c3a8 293 Pfam PF07676 WD40-like Beta Propeller Repeat 33 69 1.7E-9 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS01860 ac962317222d3691ba2fad6d48d9c3a8 293 Gene3D G3DSA:2.130.10.10 34 224 7.7E-22 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS01860 ac962317222d3691ba2fad6d48d9c3a8 293 SUPERFAMILY SSF82171 36 226 4.19E-20 T 11-11-2016 ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 Gene3D G3DSA:3.40.50.1820 449 705 1.9E-70 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 SUPERFAMILY SSF82171 34 147 4.32E-37 T 11-11-2016 ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 SUPERFAMILY SSF82171 279 440 4.32E-37 T 11-11-2016 ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 SUPERFAMILY SSF82171 183 250 4.32E-37 T 11-11-2016 ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 Gene3D G3DSA:2.120.10.60 191 391 2.0E-53 T 11-11-2016 ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 Gene3D G3DSA:2.120.10.60 27 149 2.0E-53 T 11-11-2016 ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 Pfam PF07676 WD40-like Beta Propeller Repeat 83 114 8.2E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 Pfam PF07676 WD40-like Beta Propeller Repeat 299 318 0.062 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 SUPERFAMILY SSF53474 449 704 2.7E-69 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS17220 e44062afc145dd975fc9b15499f69c49 706 Pfam PF00326 Prolyl oligopeptidase family 496 705 2.9E-59 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 Pfam PF03330 Lytic transglycolase 135 224 6.0E-24 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 SUPERFAMILY SSF110997 398 468 4.58E-7 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 SUPERFAMILY SSF50685 123 220 3.84E-10 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 Pfam PF05036 Sporulation related domain 396 469 2.0E-11 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 137 237 2.9E-41 T 11-11-2016 IPR012997 Rare lipoprotein A ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 Gene3D G3DSA:2.40.40.10 176 220 1.0E-4 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ATY42_RS19905 97c28d803c12ca43d6da815aadb78189 471 Gene3D G3DSA:3.30.70.1070 397 463 7.9E-7 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 SUPERFAMILY SSF56935 115 329 2.38E-57 T 11-11-2016 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 SUPERFAMILY SSF56935 933 1009 2.38E-57 T 11-11-2016 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 SUPERFAMILY SSF56935 731 905 2.38E-57 T 11-11-2016 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 SUPERFAMILY SSF56935 630 671 2.38E-57 T 11-11-2016 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 SUPERFAMILY SSF56935 356 590 2.38E-57 T 11-11-2016 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 Gene3D G3DSA:2.60.40.10 48 99 2.9E-5 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 Pfam PF13620 Carboxypeptidase regulatory-like domain 47 103 8.0E-8 T 11-11-2016 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 Gene3D G3DSA:2.40.170.20 718 1009 2.8E-43 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 Gene3D G3DSA:2.40.170.20 251 580 2.8E-43 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 Gene3D G3DSA:2.40.170.20 633 674 2.8E-43 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 Gene3D G3DSA:2.170.130.10 117 208 4.2E-6 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS01105 414dfd2e0317fbbfdb9cd1ccbd1861fa 1012 SUPERFAMILY SSF49452 31 99 1.96E-7 T 11-11-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 ATY42_RS06320 7ae866d559ed75e23737b4376bf13ec0 182 Gene3D G3DSA:3.40.50.1000 11 176 1.4E-40 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS06320 7ae866d559ed75e23737b4376bf13ec0 182 SUPERFAMILY SSF56784 16 178 5.25E-39 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS06320 7ae866d559ed75e23737b4376bf13ec0 182 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 20 171 1.9E-37 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ATY42_RS06320 7ae866d559ed75e23737b4376bf13ec0 182 PIRSF PIRSF006118 7 181 3.0E-67 T 11-11-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ATY42_RS06320 7ae866d559ed75e23737b4376bf13ec0 182 Pfam PF08282 haloacid dehalogenase-like hydrolase 94 151 4.9E-6 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 Pfam PF13623 SurA N-terminal domain 2 159 8.8E-26 T 11-11-2016 ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 SUPERFAMILY SSF109998 221 257 1.1E-19 T 11-11-2016 IPR027304 Trigger factor/SurA domain ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 SUPERFAMILY SSF109998 68 188 1.1E-19 T 11-11-2016 IPR027304 Trigger factor/SurA domain ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 Pfam PF13616 PPIC-type PPIASE domain 280 388 4.5E-30 T 11-11-2016 ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 326 347 - T 11-11-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-936440 ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 Gene3D G3DSA:3.10.50.40 280 408 1.5E-40 T 11-11-2016 ATY42_RS04980 2704a95615ae6766c9f64dd0f3a2eea8 656 SUPERFAMILY SSF54534 283 389 9.81E-32 T 11-11-2016 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 SUPERFAMILY SSF88633 177 293 1.77E-7 T 11-11-2016 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 PRINTS PR00419 Adrenodoxin reductase family signature 17 39 2.3E-7 T 11-11-2016 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 PRINTS PR00419 Adrenodoxin reductase family signature 40 53 2.3E-7 T 11-11-2016 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 Pfam PF13450 NAD(P)-binding Rossmann-like domain 20 82 2.6E-16 T 11-11-2016 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 SUPERFAMILY SSF51905 293 334 6.47E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 SUPERFAMILY SSF51905 16 210 6.47E-31 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 Gene3D G3DSA:3.50.50.60 16 54 6.7E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 Gene3D G3DSA:3.50.50.60 124 200 6.7E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 Gene3D G3DSA:3.50.50.60 297 335 6.7E-45 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 Gene3D G3DSA:3.90.660.10 201 292 2.5E-47 T 11-11-2016 ATY42_RS09035 b3ce5c3016fb89522655ef86f55942d9 344 Gene3D G3DSA:3.90.660.10 60 123 2.5E-47 T 11-11-2016 ATY42_RS14920 9273a74533c134a8e73730cf34926b3d 318 Gene3D G3DSA:3.30.420.10 165 307 1.2E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14920 9273a74533c134a8e73730cf34926b3d 318 Pfam PF13936 Helix-turn-helix domain 3 45 5.4E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS14920 9273a74533c134a8e73730cf34926b3d 318 SUPERFAMILY SSF53098 163 308 1.82E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14920 9273a74533c134a8e73730cf34926b3d 318 Pfam PF00665 Integrase core domain 174 267 2.2E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS22005 563e91b3024f05abe38a0a4da890a852 206 Gene3D G3DSA:1.10.357.10 7 203 3.9E-38 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS22005 563e91b3024f05abe38a0a4da890a852 206 SUPERFAMILY SSF46689 10 90 1.56E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS22005 563e91b3024f05abe38a0a4da890a852 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 2.1E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS22005 563e91b3024f05abe38a0a4da890a852 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 2.1E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS22005 563e91b3024f05abe38a0a4da890a852 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 8.9E-17 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS22005 563e91b3024f05abe38a0a4da890a852 206 SUPERFAMILY SSF48498 87 200 1.59E-10 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 Gene3D G3DSA:1.10.287.130 202 240 4.8E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 381 9.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 348 9.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 400 9.0E-6 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 SMART SM00387 295 403 2.3E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 Gene3D G3DSA:3.30.565.10 280 404 1.8E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 401 1.2E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 SUPERFAMILY SSF47384 197 241 1.04E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS10885 7b6bf7042e3a4760a3cf505cd1441abd 408 SUPERFAMILY SSF55874 272 401 6.02E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 Gene3D G3DSA:3.40.50.720 5 254 8.2E-86 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 253 5.2E-62 T 11-11-2016 ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 3.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 3.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.2E-36 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 2.9E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.9E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 2.9E-7 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS02750 abd18d2cb66218ce3ff26c30dfb680b0 258 SUPERFAMILY SSF51735 9 255 5.35E-80 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 246 259 - T 11-11-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 PRINTS PR00799 Aspartate aminotransferase signature 343 361 7.0E-35 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 PRINTS PR00799 Aspartate aminotransferase signature 276 301 7.0E-35 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 PRINTS PR00799 Aspartate aminotransferase signature 208 220 7.0E-35 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 PRINTS PR00799 Aspartate aminotransferase signature 177 196 7.0E-35 T 11-11-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 Pfam PF00155 Aminotransferase class I and II 29 394 3.3E-79 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 SUPERFAMILY SSF53383 2 396 6.88E-114 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS00085 723d34236e36eb7312e711c75b548ceb 400 Gene3D G3DSA:3.40.640.10 48 318 1.2E-103 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS09935 91a472b30bea82977db4e3d31e0c2d3b 87 Gene3D G3DSA:2.30.42.10 11 87 9.1E-12 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09935 91a472b30bea82977db4e3d31e0c2d3b 87 SUPERFAMILY SSF50156 8 73 3.55E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09935 91a472b30bea82977db4e3d31e0c2d3b 87 Pfam PF13180 PDZ domain 13 74 3.1E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS09935 91a472b30bea82977db4e3d31e0c2d3b 87 SMART SM00228 2 73 1.2E-6 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS03725 845f2b1e142e919061545c91fde19417 208 SUPERFAMILY SSF47616 75 205 4.26E-29 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS03725 845f2b1e142e919061545c91fde19417 208 Gene3D G3DSA:1.20.1050.10 89 206 3.5E-49 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS03725 845f2b1e142e919061545c91fde19417 208 Gene3D G3DSA:3.40.30.10 5 88 9.6E-21 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS03725 845f2b1e142e919061545c91fde19417 208 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 206 2.4E-79 T 11-11-2016 IPR005955 Maleylacetoacetate isomerase GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 ATY42_RS03725 845f2b1e142e919061545c91fde19417 208 SUPERFAMILY SSF52833 5 95 8.24E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS03725 845f2b1e142e919061545c91fde19417 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 71 1.4E-11 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS11665 c3dafffe4a0135c5d04cea3fb62baf2b 202 Gene3D G3DSA:1.20.1540.10 2 186 3.8E-35 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS11665 c3dafffe4a0135c5d04cea3fb62baf2b 202 SUPERFAMILY SSF144091 2 189 2.09E-33 T 11-11-2016 ATY42_RS11665 c3dafffe4a0135c5d04cea3fb62baf2b 202 Pfam PF01694 Rhomboid family 35 186 9.5E-26 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS17875 ca4600f655e916d0990ab764c5fb3b52 356 Pfam PF11876 Protein of unknown function (DUF3396) 120 326 3.8E-41 T 11-11-2016 IPR021815 Protein of unknown function DUF3396 ATY42_RS18675 3f382b803027496bdfc311091497701a 213 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 78 1.3E-10 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS18675 3f382b803027496bdfc311091497701a 213 Gene3D G3DSA:1.20.1050.10 98 208 4.7E-35 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS18675 3f382b803027496bdfc311091497701a 213 SUPERFAMILY SSF47616 86 202 6.63E-12 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS18675 3f382b803027496bdfc311091497701a 213 SUPERFAMILY SSF52833 7 87 1.45E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18675 3f382b803027496bdfc311091497701a 213 Gene3D G3DSA:3.40.30.10 10 97 8.6E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS15560 901b281229afad6db33e7c35ed872f56 168 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 12 77 8.9E-14 T 11-11-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal ATY42_RS17580 16a9e537c6fbc13f9a959d0b6eb7409b 181 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 12 96 2.2E-21 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS14035 44c1a5e5aab177ad7b57a5136649f873 129 SUPERFAMILY SSF69279 24 121 1.96E-20 T 11-11-2016 ATY42_RS14035 44c1a5e5aab177ad7b57a5136649f873 129 Pfam PF05954 Phage late control gene D protein (GPD) 20 121 1.6E-24 T 11-11-2016 ATY42_RS14035 44c1a5e5aab177ad7b57a5136649f873 129 Gene3D G3DSA:3.55.50.10 58 123 7.4E-11 T 11-11-2016 ATY42_RS14015 44c1a5e5aab177ad7b57a5136649f873 129 SUPERFAMILY SSF69279 24 121 1.96E-20 T 11-11-2016 ATY42_RS14015 44c1a5e5aab177ad7b57a5136649f873 129 Pfam PF05954 Phage late control gene D protein (GPD) 20 121 1.6E-24 T 11-11-2016 ATY42_RS14015 44c1a5e5aab177ad7b57a5136649f873 129 Gene3D G3DSA:3.55.50.10 58 123 7.4E-11 T 11-11-2016 ATY42_RS15080 8cd74ef1f850f90481b3c7dfd5b51142 1483 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 724 918 3.4E-123 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS15080 8cd74ef1f850f90481b3c7dfd5b51142 1483 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 1023 1222 7.6E-113 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS15080 8cd74ef1f850f90481b3c7dfd5b51142 1483 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 328 537 6.6E-136 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS15080 8cd74ef1f850f90481b3c7dfd5b51142 1483 SUPERFAMILY SSF53901 785 889 2.99E-5 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 Pfam PF04389 Peptidase family M28 324 540 1.4E-48 T 11-11-2016 IPR007484 Peptidase M28 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 Gene3D G3DSA:3.40.630.10 323 555 1.4E-58 T 11-11-2016 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 Gene3D G3DSA:3.40.630.10 52 115 1.4E-58 T 11-11-2016 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 Pfam PF02225 PA domain 154 249 1.1E-7 T 11-11-2016 IPR003137 PA domain ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 Gene3D G3DSA:3.50.30.30 153 235 9.5E-5 T 11-11-2016 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 SUPERFAMILY SSF53187 52 98 1.45E-64 T 11-11-2016 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 SUPERFAMILY SSF53187 308 551 1.45E-64 T 11-11-2016 ATY42_RS02030 ec6e61b9bf87094dee2ca7137c404572 575 SUPERFAMILY SSF52025 152 237 4.19E-9 T 11-11-2016 ATY42_RS12460 ce13238e378bbc0998ae959044527a67 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS12460 ce13238e378bbc0998ae959044527a67 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS12460 ce13238e378bbc0998ae959044527a67 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 2.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 9.0E-5 T 11-11-2016 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 43 65 9.0E-5 T 11-11-2016 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 Gene3D G3DSA:3.50.50.60 357 414 6.7E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 Gene3D G3DSA:3.50.50.60 185 264 6.7E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 Gene3D G3DSA:3.50.50.60 32 132 6.7E-48 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 SUPERFAMILY SSF51905 357 428 2.24E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 SUPERFAMILY SSF51905 41 265 2.24E-39 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13810 a59a4e328db8fca7bb40000a573316f3 438 Pfam PF01266 FAD dependent oxidoreductase 43 393 1.0E-48 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATY42_RS10275 30befc87236ddf91c0994bc1bbba3913 155 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 75 152 3.8E-14 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS10275 30befc87236ddf91c0994bc1bbba3913 155 SUPERFAMILY SSF74653 73 151 3.14E-16 T 11-11-2016 ATY42_RS10275 30befc87236ddf91c0994bc1bbba3913 155 Gene3D G3DSA:3.30.1150.10 74 154 1.2E-8 T 11-11-2016 ATY42_RS10275 30befc87236ddf91c0994bc1bbba3913 155 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 75 152 4.5E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS12210 42905d396a3c230fc3f85f8af3e1d9a9 416 Gene3D G3DSA:2.40.160.10 32 416 3.9E-102 T 11-11-2016 IPR023614 Porin domain ATY42_RS12210 42905d396a3c230fc3f85f8af3e1d9a9 416 SUPERFAMILY SSF56935 188 414 1.14E-8 T 11-11-2016 ATY42_RS12210 42905d396a3c230fc3f85f8af3e1d9a9 416 SUPERFAMILY SSF56935 31 127 1.14E-8 T 11-11-2016 ATY42_RS12210 42905d396a3c230fc3f85f8af3e1d9a9 416 Pfam PF07396 Phosphate-selective porin O and P 41 416 5.4E-98 T 11-11-2016 IPR010870 Phosphate-selective porin O/P ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 SUPERFAMILY SSF51905 269 380 2.59E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 SUPERFAMILY SSF51905 5 179 2.59E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 6 389 3.1E-132 T 11-11-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 158 173 8.7E-21 T 11-11-2016 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 8.7E-21 T 11-11-2016 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 8.7E-21 T 11-11-2016 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 8.7E-21 T 11-11-2016 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 Gene3D G3DSA:3.50.50.60 5 184 2.3E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 Gene3D G3DSA:3.50.50.60 270 354 2.3E-35 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 389 1.7E-107 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ATY42_RS18835 ae7ab9cd571f7da5739ef504880f4dcd 402 Pfam PF01494 FAD binding domain 6 339 2.5E-30 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 ATY42_RS21235 ca24e6cd839b59e2250c8c2d9a397df1 52 PIRSF PIRSF036466 1 52 4.9E-22 T 11-11-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 ATY42_RS21235 ca24e6cd839b59e2250c8c2d9a397df1 52 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 51 19.917 T 11-11-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 ATY42_RS21235 ca24e6cd839b59e2250c8c2d9a397df1 52 Pfam PF07043 Protein of unknown function (DUF1328) 7 44 1.1E-15 T 11-11-2016 IPR009760 Protein of unknown function DUF1328 GO:0005886 ATY42_RS05745 5b746fac70d514f017b52728f96ada17 309 Pfam PF01471 Putative peptidoglycan binding domain 37 86 1.5E-9 T 11-11-2016 IPR002477 Peptidoglycan binding-like ATY42_RS05745 5b746fac70d514f017b52728f96ada17 309 Gene3D G3DSA:2.40.440.10 172 307 1.4E-28 T 11-11-2016 ATY42_RS05745 5b746fac70d514f017b52728f96ada17 309 SUPERFAMILY SSF47090 36 87 5.18E-11 T 11-11-2016 IPR002477 Peptidoglycan binding-like ATY42_RS05745 5b746fac70d514f017b52728f96ada17 309 SUPERFAMILY SSF141523 174 306 3.66E-27 T 11-11-2016 ATY42_RS05745 5b746fac70d514f017b52728f96ada17 309 Gene3D G3DSA:1.10.101.10 38 88 9.3E-10 T 11-11-2016 IPR002477 Peptidoglycan binding-like ATY42_RS05745 5b746fac70d514f017b52728f96ada17 309 Pfam PF03734 L,D-transpeptidase catalytic domain 177 305 1.0E-17 T 11-11-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 SMART SM00841 131 186 1.7E-24 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-11-2016 IPR013852 Translation elongation factor P/YeiP, conserved site ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.5E-20 T 11-11-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Gene3D G3DSA:2.30.30.30 2 63 8.3E-9 T 11-11-2016 IPR014722 Ribosomal protein L2 domain 2 ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.1E-13 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 SMART SM01185 68 123 3.9E-14 T 11-11-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 2 60 7.4E-12 T 11-11-2016 IPR013185 Translation elongation factor, KOW-like ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 SUPERFAMILY SSF50104 2 62 1.32E-8 T 11-11-2016 IPR008991 Translation protein SH3-like domain ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 1 187 40.423 T 11-11-2016 IPR011897 Translation elongation factor P-like, YeiP ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Gene3D G3DSA:2.40.50.140 68 129 1.7E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 Gene3D G3DSA:2.40.50.140 130 187 1.6E-22 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 PIRSF PIRSF005901 1 188 6.5E-60 T 11-11-2016 IPR020599 Translation elongation factor P/YeiP ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 SUPERFAMILY SSF50249 69 128 1.16E-11 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 2 187 7.4E-84 T 11-11-2016 IPR011897 Translation elongation factor P-like, YeiP ATY42_RS14480 12006fe4e13e44a117aa311029432431 188 SUPERFAMILY SSF50249 130 187 2.06E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 Gene3D G3DSA:3.30.465.10 197 285 1.3E-27 T 11-11-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 SMART SM00116 141 189 1.9 T 11-11-2016 IPR000644 CBS domain ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 SMART SM00116 78 127 3.5 T 11-11-2016 IPR000644 CBS domain ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 SUPERFAMILY SSF56176 206 290 3.54E-24 T 11-11-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 SUPERFAMILY SSF54631 65 202 6.95E-31 T 11-11-2016 ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 Pfam PF03471 Transporter associated domain 209 283 4.2E-22 T 11-11-2016 IPR005170 Transporter-associated domain ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 SMART SM01091 207 285 1.6E-28 T 11-11-2016 IPR005170 Transporter-associated domain ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 Gene3D G3DSA:3.10.580.10 57 196 1.3E-18 T 11-11-2016 ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 Pfam PF00571 CBS domain 137 189 5.3E-5 T 11-11-2016 IPR000644 CBS domain ATY42_RS13735 3b6a657ec70a0e85d57c27e17384ce39 292 Pfam PF00571 CBS domain 69 124 2.9E-5 T 11-11-2016 IPR000644 CBS domain ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 Pfam PF03466 LysR substrate binding domain 93 299 1.7E-41 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 Gene3D G3DSA:1.10.10.10 6 86 3.5E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 Gene3D G3DSA:3.40.190.10 183 267 1.1E-17 T 11-11-2016 ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 SUPERFAMILY SSF46785 8 92 1.42E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 Gene3D G3DSA:3.40.190.10 98 182 1.8E-19 T 11-11-2016 ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 6.7E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS10315 4aac5a1202c5cf04dd3fab3736ee80d6 337 SUPERFAMILY SSF53850 94 302 8.69E-42 T 11-11-2016 ATY42_RS07960 5a98b4145d7bf154710aea053b4d62f3 134 SUPERFAMILY SSF54637 9 132 7.28E-35 T 11-11-2016 IPR029069 HotDog domain ATY42_RS07960 5a98b4145d7bf154710aea053b4d62f3 134 Gene3D G3DSA:3.10.129.10 9 132 2.0E-38 T 11-11-2016 IPR029069 HotDog domain ATY42_RS07960 5a98b4145d7bf154710aea053b4d62f3 134 Pfam PF13279 Thioesterase-like superfamily 14 131 8.9E-22 T 11-11-2016 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 11-11-2016 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 SUPERFAMILY SSF47413 5 63 2.63E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 SMART SM00354 5 75 8.9E-25 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 2.4E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 2.4E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 Pfam PF13377 Periplasmic binding protein-like domain 172 333 3.3E-36 T 11-11-2016 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 Gene3D G3DSA:1.10.260.40 6 58 5.0E-23 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 Gene3D G3DSA:3.40.50.2300 59 175 7.9E-38 T 11-11-2016 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 Gene3D G3DSA:3.40.50.2300 176 311 6.2E-48 T 11-11-2016 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 51 3.3E-15 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS10540 ba14023413b9a2ee53fa91ab5d26fc4f 340 SUPERFAMILY SSF53822 64 335 4.17E-68 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS15970 289c1fcb28c777bbe232c78827e8a9d2 232 Pfam PF10531 SLBB domain 127 180 3.2E-8 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS15970 289c1fcb28c777bbe232c78827e8a9d2 232 Gene3D G3DSA:3.30.1950.10 54 115 1.8E-15 T 11-11-2016 ATY42_RS15970 289c1fcb28c777bbe232c78827e8a9d2 232 Pfam PF02563 Polysaccharide biosynthesis/export protein 45 120 2.2E-19 T 11-11-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 ATY42_RS15970 289c1fcb28c777bbe232c78827e8a9d2 232 Gene3D G3DSA:3.10.560.10 116 211 2.3E-16 T 11-11-2016 ATY42_RS01725 feb76a806da5bdb4e0717b45ff573786 331 Gene3D G3DSA:3.40.50.300 4 232 1.5E-64 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01725 feb76a806da5bdb4e0717b45ff573786 331 SMART SM00382 36 227 2.2E-11 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS01725 feb76a806da5bdb4e0717b45ff573786 331 SUPERFAMILY SSF52540 6 238 2.51E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01725 feb76a806da5bdb4e0717b45ff573786 331 Pfam PF00005 ABC transporter 27 171 1.4E-27 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS01725 feb76a806da5bdb4e0717b45ff573786 331 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS07955 54009ca466f861c7f9755d27237dbfcc 154 Pfam PF04314 Protein of unknown function (DUF461) 37 142 5.0E-29 T 11-11-2016 IPR007410 DR1885-like metal-binding protein ATY42_RS07955 54009ca466f861c7f9755d27237dbfcc 154 SUPERFAMILY SSF110087 15 152 9.15E-36 T 11-11-2016 IPR007410 DR1885-like metal-binding protein ATY42_RS20610 94ae57c17af036354f9de77d35bcd32e 113 Pfam PF13202 EF hand 75 98 2.8E-5 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS20610 94ae57c17af036354f9de77d35bcd32e 113 Pfam PF13202 EF hand 55 67 0.015 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS20610 94ae57c17af036354f9de77d35bcd32e 113 SUPERFAMILY SSF47473 50 99 3.42E-8 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS20610 94ae57c17af036354f9de77d35bcd32e 113 Gene3D G3DSA:1.10.238.10 52 100 2.4E-8 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS20610 94ae57c17af036354f9de77d35bcd32e 113 ProSitePatterns PS00018 EF-hand calcium-binding domain. 82 94 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS21670 7ea32584aa8ee6673ec4a2049501169e 249 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 64 192 3.8E-36 T 11-11-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: R-HSA-1483166|Reactome: R-HSA-75109 ATY42_RS21670 7ea32584aa8ee6673ec4a2049501169e 249 SUPERFAMILY SSF69593 11 245 6.54E-57 T 11-11-2016 ATY42_RS21670 7ea32584aa8ee6673ec4a2049501169e 249 Gene3D G3DSA:3.40.1130.10 67 241 1.8E-24 T 11-11-2016 ATY42_RS21670 7ea32584aa8ee6673ec4a2049501169e 249 SMART SM00563 81 195 3.0E-39 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS21670 7ea32584aa8ee6673ec4a2049501169e 249 Pfam PF01553 Acyltransferase 67 192 7.0E-30 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 322 334 - T 11-11-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 SUPERFAMILY SSF48173 192 470 1.11E-100 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 Gene3D G3DSA:1.10.579.10 281 470 1.5E-73 T 11-11-2016 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 Pfam PF03441 FAD binding domain of DNA photolyase 272 468 1.9E-79 T 11-11-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 PRINTS PR00147 DNA photolyase signature 140 156 5.3E-23 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 PRINTS PR00147 DNA photolyase signature 381 395 5.3E-23 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 PRINTS PR00147 DNA photolyase signature 322 338 5.3E-23 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 PRINTS PR00147 DNA photolyase signature 342 360 5.3E-23 T 11-11-2016 IPR002081 Cryptochrome/DNA photolyase class 1 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 Gene3D G3DSA:1.25.40.80 201 280 4.9E-38 T 11-11-2016 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 Gene3D G3DSA:1.25.40.80 145 168 4.9E-38 T 11-11-2016 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 Gene3D G3DSA:3.40.50.620 2 144 1.9E-49 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 SUPERFAMILY SSF52425 3 181 7.33E-57 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 ATY42_RS07490 cbc39b3c9e795e6f8e58c0eff586f63a 472 Pfam PF00875 DNA photolyase 4 166 4.3E-52 T 11-11-2016 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 Gene3D G3DSA:3.40.50.720 2 254 1.4E-57 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.3E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.3E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-5 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 SUPERFAMILY SSF51735 7 255 1.26E-55 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS01025 0a3a2ebdef09736149b0c802114b10a8 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 1.5E-35 T 11-11-2016 ATY42_RS20255 a5efdec8e48b31ae7a7b5271f3c25df6 303 Pfam PF01544 CorA-like Mg2+ transporter protein 16 299 5.4E-50 T 11-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ATY42_RS20255 a5efdec8e48b31ae7a7b5271f3c25df6 303 SUPERFAMILY SSF144083 238 300 4.32E-17 T 11-11-2016 ATY42_RS20255 a5efdec8e48b31ae7a7b5271f3c25df6 303 SUPERFAMILY SSF143865 12 236 1.7E-27 T 11-11-2016 ATY42_RS20255 a5efdec8e48b31ae7a7b5271f3c25df6 303 Gene3D G3DSA:1.20.58.340 227 303 1.4E-22 T 11-11-2016 ATY42_RS10485 4ac88e97b2cf922a19c471edb7a2b3e8 214 Pfam PF00005 ABC transporter 30 165 2.1E-24 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS10485 4ac88e97b2cf922a19c471edb7a2b3e8 214 SMART SM00382 36 213 1.2E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS10485 4ac88e97b2cf922a19c471edb7a2b3e8 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 12 204 7.2E-70 T 11-11-2016 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 ATY42_RS10485 4ac88e97b2cf922a19c471edb7a2b3e8 214 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS10485 4ac88e97b2cf922a19c471edb7a2b3e8 214 Gene3D G3DSA:3.40.50.300 7 210 2.2E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS10485 4ac88e97b2cf922a19c471edb7a2b3e8 214 SUPERFAMILY SSF52540 10 211 2.04E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11420 ecbaa76ae3da0afabdf8490d136204ad 82 SUPERFAMILY SSF109910 2 79 8.5E-24 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase ATY42_RS11420 ecbaa76ae3da0afabdf8490d136204ad 82 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 8.4E-24 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase ATY42_RS11420 ecbaa76ae3da0afabdf8490d136204ad 82 Gene3D G3DSA:1.10.150.250 2 79 3.2E-27 T 11-11-2016 IPR005631 Flavinator of succinate dehydrogenase ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 SUPERFAMILY SSF53613 6 298 3.43E-59 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 Gene3D G3DSA:3.40.1190.20 36 315 1.3E-70 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 Pfam PF00294 pfkB family carbohydrate kinase 10 301 8.2E-56 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 PIRSF PIRSF000535 2 317 1.7E-104 T 11-11-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 6 314 1.1E-89 T 11-11-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ATY42_RS13930 8cb7e57921b2c2155a33ae98bf83e72c 318 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATY42_RS04565 135376a73224ad928ea2ea75be990894 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 11-11-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ATY42_RS04565 135376a73224ad928ea2ea75be990894 297 Gene3D G3DSA:1.10.10.60 174 226 2.1E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04565 135376a73224ad928ea2ea75be990894 297 SUPERFAMILY SSF46689 225 276 1.03E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04565 135376a73224ad928ea2ea75be990894 297 Pfam PF12833 Helix-turn-helix domain 195 273 9.8E-18 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS04565 135376a73224ad928ea2ea75be990894 297 Gene3D G3DSA:1.10.10.60 227 275 6.7E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04565 135376a73224ad928ea2ea75be990894 297 SMART SM00342 189 272 4.3E-16 T 11-11-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 Gene3D G3DSA:3.50.30.30 153 320 2.7E-4 T 11-11-2016 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 SUPERFAMILY SSF53187 304 545 1.92E-63 T 11-11-2016 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 SUPERFAMILY SSF53187 49 98 1.92E-63 T 11-11-2016 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 Pfam PF04389 Peptidase family M28 320 536 3.3E-50 T 11-11-2016 IPR007484 Peptidase M28 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 SUPERFAMILY SSF52025 153 278 1.83E-5 T 11-11-2016 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 Gene3D G3DSA:3.40.630.10 321 555 4.7E-59 T 11-11-2016 ATY42_RS23075 eb86c8975f74346e759cf8929494ec5e 603 Gene3D G3DSA:3.40.630.10 39 110 4.7E-59 T 11-11-2016 ATY42_RS20940 71d05c238f95d13f5810aea3ff6d8e13 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 154.168 T 11-11-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ATY42_RS20940 71d05c238f95d13f5810aea3ff6d8e13 264 Gene3D G3DSA:3.60.90.10 39 187 3.9E-47 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 ATY42_RS20940 71d05c238f95d13f5810aea3ff6d8e13 264 PIRSF PIRSF001356 2 264 1.1E-145 T 11-11-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ATY42_RS20940 71d05c238f95d13f5810aea3ff6d8e13 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 7 262 2.1E-141 T 11-11-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ATY42_RS20940 71d05c238f95d13f5810aea3ff6d8e13 264 Pfam PF02675 S-adenosylmethionine decarboxylase 42 170 1.3E-30 T 11-11-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ATY42_RS20940 71d05c238f95d13f5810aea3ff6d8e13 264 SUPERFAMILY SSF56276 47 175 1.33E-24 T 11-11-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 ATY42_RS01275 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS01275 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS13325 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS13325 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12490 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS12490 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS17245 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17245 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15335 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS15335 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS17635 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17635 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10205 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10205 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07795 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07795 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12185 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS12185 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04835 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS04835 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10250 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10250 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10195 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF05598 Transposase domain (DUF772) 50 122 6.3E-20 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10195 213c8bf9ba923bd5d959505b0f1808bb 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 122 227 2.4E-40 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 SUPERFAMILY SSF46609 28 115 4.06E-33 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 194 201 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 Gene3D G3DSA:1.10.287.990 48 114 3.2E-26 T 11-11-2016 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 31 114 3.6E-29 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 SUPERFAMILY SSF54719 118 232 1.14E-43 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 PRINTS PR01703 Manganese superoxide dismutase signature 97 110 5.8E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 PRINTS PR01703 Manganese superoxide dismutase signature 151 159 5.8E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 PRINTS PR01703 Manganese superoxide dismutase signature 34 45 5.8E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 PRINTS PR01703 Manganese superoxide dismutase signature 55 68 5.8E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 PRINTS PR01703 Manganese superoxide dismutase signature 192 204 5.8E-25 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS14115 ad0ec15a7ff4f2759187374498e2b031 235 PIRSF PIRSF000349 4 235 1.4E-81 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22050 d3f8e9a1ba85ccf439ff6ab9fc42863e 572 Gene3D G3DSA:3.60.10.10 273 570 2.8E-23 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS22050 d3f8e9a1ba85ccf439ff6ab9fc42863e 572 SUPERFAMILY SSF56219 271 571 1.07E-29 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS22050 d3f8e9a1ba85ccf439ff6ab9fc42863e 572 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 307 531 1.5E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 SMART SM00448 1 113 2.9E-40 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 Pfam PF00072 Response regulator receiver domain 4 113 4.2E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 SMART SM00862 147 221 2.4E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 2.8E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 Gene3D G3DSA:3.40.50.2300 1 125 7.9E-37 T 11-11-2016 ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 Gene3D G3DSA:1.10.10.10 126 222 1.1E-20 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS17805 88fe55937a54fc9ee8f84642ad00ea78 238 SUPERFAMILY SSF52172 1 174 2.85E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS17520 7405c2a99a08f7f63cfc9cc131efe23e 202 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 19 172 2.0E-28 T 11-11-2016 IPR017734 Type VI secretion system, lipoprotein SciN ATY42_RS17520 7405c2a99a08f7f63cfc9cc131efe23e 202 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 12 174 1.3E-27 T 11-11-2016 IPR017734 Type VI secretion system, lipoprotein SciN ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 215 453 3.7E-64 T 11-11-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 PRINTS PR00084 Mannitol dehydrogenase signature 247 262 2.4E-15 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 PRINTS PR00084 Mannitol dehydrogenase signature 178 191 2.4E-15 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 PRINTS PR00084 Mannitol dehydrogenase signature 217 230 2.4E-15 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 PRINTS PR00084 Mannitol dehydrogenase signature 32 42 2.4E-15 T 11-11-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 SUPERFAMILY SSF48179 282 481 4.42E-52 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 Gene3D G3DSA:1.10.1040.10 281 477 3.8E-59 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 Gene3D G3DSA:3.40.50.720 9 279 1.2E-101 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 SUPERFAMILY SSF51735 7 279 7.09E-90 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22230 aedb405a0c5ef75bedb51bb3f6894e54 490 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 31 187 1.2E-36 T 11-11-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 585 689 1.6E-33 T 11-11-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 32 519 6.6E-84 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 Gene3D G3DSA:2.40.50.230 428 515 1.4E-29 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 32 520 1.0E-71 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 750 906 1.5E-32 T 11-11-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 SUPERFAMILY SSF69255 421 515 7.32E-25 T 11-11-2016 ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 SUPERFAMILY SSF69279 27 204 1.19E-45 T 11-11-2016 ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 Gene3D G3DSA:3.55.50.10 108 208 3.8E-27 T 11-11-2016 ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 SUPERFAMILY SSF69279 230 356 1.41E-9 T 11-11-2016 ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 SUPERFAMILY SSF69279 393 410 1.41E-9 T 11-11-2016 ATY42_RS07140 2d4b722293bf08f516314c685db98892 939 Pfam PF05954 Phage late control gene D protein (GPD) 40 355 1.0E-73 T 11-11-2016 ATY42_RS18450 ffd2129389c8030eafbb5e31be5ea309 131 Gene3D G3DSA:1.20.1290.10 9 120 9.2E-30 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATY42_RS18450 ffd2129389c8030eafbb5e31be5ea309 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 32 112 1.3E-16 T 11-11-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATY42_RS18450 ffd2129389c8030eafbb5e31be5ea309 131 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 48 95 1.5E-9 T 11-11-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATY42_RS18450 ffd2129389c8030eafbb5e31be5ea309 131 SUPERFAMILY SSF69118 6 112 4.32E-24 T 11-11-2016 IPR029032 AhpD-like Reactome: R-HSA-5628897 ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 Gene3D G3DSA:2.40.240.20 1 68 4.5E-22 T 11-11-2016 ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 PIRSF PIRSF015601 6 244 1.7E-58 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 SUPERFAMILY SSF75217 74 244 4.45E-50 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 SUPERFAMILY SSF88697 5 69 9.61E-14 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 Gene3D G3DSA:3.40.1280.10 75 244 6.2E-59 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 Pfam PF04452 RNA methyltransferase 19 238 9.8E-71 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS08685 b9f9f4a3512102d4bd19666ece6ad112 244 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 17 244 5.5E-60 T 11-11-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 Pfam PF00285 Citrate synthase, C-terminal domain 17 365 1.5E-112 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 Gene3D G3DSA:1.10.230.10 245 330 3.0E-28 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 Gene3D G3DSA:1.10.580.10 22 244 7.7E-75 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 SUPERFAMILY SSF48256 17 377 6.15E-122 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 16 383 2.2E-152 T 11-11-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PIRSF PIRSF001369 10 384 3.8E-109 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 ProSitePatterns PS00480 Citrate synthase signature. 266 278 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PRINTS PR00143 Citrate synthase signature 336 350 1.9E-36 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PRINTS PR00143 Citrate synthase signature 134 147 1.9E-36 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PRINTS PR00143 Citrate synthase signature 206 234 1.9E-36 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PRINTS PR00143 Citrate synthase signature 184 199 1.9E-36 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PRINTS PR00143 Citrate synthase signature 259 279 1.9E-36 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS04305 0a72fd40c350668bbb9cb3f23bf44439 384 PRINTS PR00143 Citrate synthase signature 316 332 1.9E-36 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 Gene3D G3DSA:3.40.630.10 136 453 3.3E-114 T 11-11-2016 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 146 430 7.1E-101 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 PRINTS PR00481 Cytosol aminopeptidase signature 241 262 5.8E-43 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 5.8E-43 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 PRINTS PR00481 Cytosol aminopeptidase signature 300 320 5.8E-43 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 PRINTS PR00481 Cytosol aminopeptidase signature 219 236 5.8E-43 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 PRINTS PR00481 Cytosol aminopeptidase signature 328 343 5.8E-43 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 304 311 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATY42_RS02090 64459c7a2bb195c754c4efac8c61c7a0 456 SUPERFAMILY SSF53187 139 453 1.35E-105 T 11-11-2016 ATY42_RS15295 0ad6feb593d55332210a10aa052124c7 336 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 21 320 2.0E-109 T 11-11-2016 IPR010732 Type VI secretion, TssG-like ATY42_RS15295 0ad6feb593d55332210a10aa052124c7 336 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 21 320 1.6E-99 T 11-11-2016 IPR010732 Type VI secretion, TssG-like ATY42_RS17710 c845a2ef13ea681230f886c8d8ef8931 178 SUPERFAMILY SSF46689 2 58 6.9E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS17710 c845a2ef13ea681230f886c8d8ef8931 178 Pfam PF01527 Transposase 2 53 2.0E-12 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS17710 c845a2ef13ea681230f886c8d8ef8931 178 Pfam PF13359 DDE superfamily endonuclease 72 136 3.0E-6 T 11-11-2016 IPR027806 Harbinger transposase-derived nuclease domain ATY42_RS17965 ba0c82e8d4dae4fcbdf1a8a16b6c8370 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 119 3.9E-36 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS17965 ba0c82e8d4dae4fcbdf1a8a16b6c8370 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 119 1.9E-37 T 11-11-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17965 ba0c82e8d4dae4fcbdf1a8a16b6c8370 119 Gene3D G3DSA:3.30.420.100 26 119 2.2E-34 T 11-11-2016 ATY42_RS17965 ba0c82e8d4dae4fcbdf1a8a16b6c8370 119 SUPERFAMILY SSF53137 5 117 2.4E-48 T 11-11-2016 ATY42_RS17965 ba0c82e8d4dae4fcbdf1a8a16b6c8370 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 119 25.673 T 11-11-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18795 c7926d588be155bae463a4b6c6a6771f 119 Gene3D G3DSA:1.10.700.10 1 59 1.7E-18 T 11-11-2016 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit ATY42_RS18795 c7926d588be155bae463a4b6c6a6771f 119 SUPERFAMILY SSF48076 1 104 1.29E-30 T 11-11-2016 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit ATY42_RS12000 d59a18d3d95dfc5c43734ef00c1b058a 112 SUPERFAMILY SSF89360 1 96 1.83E-27 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS12000 d59a18d3d95dfc5c43734ef00c1b058a 112 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 106 7.8E-32 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 ATY42_RS12000 d59a18d3d95dfc5c43734ef00c1b058a 112 Gene3D G3DSA:2.60.300.12 2 96 5.9E-28 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS12000 d59a18d3d95dfc5c43734ef00c1b058a 112 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site ATY42_RS12000 d59a18d3d95dfc5c43734ef00c1b058a 112 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 4.8E-17 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS08395 bd87a61dfe8ab5efc59ca2af2aa6e115 92 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 26 90 2.1E-14 T 11-11-2016 IPR008792 Coenzyme PQQ synthesis D ATY42_RS08395 bd87a61dfe8ab5efc59ca2af2aa6e115 92 TIGRFAM TIGR03859 PQQ_PqqD: coenzyme PQQ biosynthesis protein PqqD 10 90 4.6E-31 T 11-11-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 ATY42_RS08395 bd87a61dfe8ab5efc59ca2af2aa6e115 92 Hamap MF_00655 Coenzyme PQQ synthesis protein D [pqqD]. 4 92 22.003 T 11-11-2016 IPR022479 Coenzyme PQQ synthesis D, bacteria GO:0018189|GO:0048038 ATY42_RS10070 63be49ce410fe85adde2d0ef1238884e 328 Gene3D G3DSA:3.40.1190.20 4 327 4.2E-89 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS10070 63be49ce410fe85adde2d0ef1238884e 328 SUPERFAMILY SSF53613 5 323 4.83E-78 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS10070 63be49ce410fe85adde2d0ef1238884e 328 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 37 61 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATY42_RS10070 63be49ce410fe85adde2d0ef1238884e 328 Pfam PF00294 pfkB family carbohydrate kinase 6 315 4.8E-66 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB ATY42_RS10070 63be49ce410fe85adde2d0ef1238884e 328 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1022 1205 2.7E-6 T 11-11-2016 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.40.50.300 512 658 7.3E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.40.50.300 804 951 7.3E-53 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 SUPERFAMILY SSF52980 966 1234 2.73E-51 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:1.10.486.10 661 803 1.0E-38 T 11-11-2016 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 11 1234 1.3E-209 T 11-11-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.90.320.10 956 1233 7.0E-82 T 11-11-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.90.320.10 1293 1320 7.0E-82 T 11-11-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 495 3.2E-49 T 11-11-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 SUPERFAMILY SSF52540 600 836 6.13E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 SUPERFAMILY SSF52540 879 901 6.13E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 SUPERFAMILY SSF52540 380 532 6.13E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 SUPERFAMILY SSF52540 14 72 6.13E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 SUPERFAMILY SSF52540 161 227 6.13E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:1.10.3170.10 200 403 1.4E-19 T 11-11-2016 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1317 18.677 T 11-11-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Pfam PF13361 UvrD-like helicase C-terminal domain 628 693 2.0E-6 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Pfam PF13361 UvrD-like helicase C-terminal domain 718 900 1.2E-14 T 11-11-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.40.50.300 163 193 3.4E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.40.50.300 14 74 3.4E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22475 ed4e2f1ce2a9f8814490097eae37dcbf 1357 Gene3D G3DSA:3.40.50.300 406 511 3.4E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 PRINTS PR00481 Cytosol aminopeptidase signature 366 381 1.2E-50 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 1.2E-50 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 1.2E-50 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 1.2E-50 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 1.2E-50 T 11-11-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 21 145 7.4E-30 T 11-11-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 342 349 - T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 Gene3D G3DSA:3.40.630.10 168 488 2.0E-132 T 11-11-2016 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 SUPERFAMILY SSF53187 175 488 6.91E-119 T 11-11-2016 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 181 481 7.3E-115 T 11-11-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 SUPERFAMILY SSF52949 4 179 2.71E-39 T 11-11-2016 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 Gene3D G3DSA:3.40.220.10 4 160 2.5E-48 T 11-11-2016 ATY42_RS04015 5692d120f8ff9f0a6d5452235970a372 490 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 5 490 35.491 T 11-11-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ATY42_RS20145 134b27ac7e5d2932bc4e4be1ac9059cb 645 SUPERFAMILY SSF53448 143 436 1.69E-23 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS20145 134b27ac7e5d2932bc4e4be1ac9059cb 645 Pfam PF13632 Glycosyl transferase family group 2 242 465 2.3E-15 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS20145 134b27ac7e5d2932bc4e4be1ac9059cb 645 Gene3D G3DSA:3.90.550.10 146 395 5.0E-4 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS20145 134b27ac7e5d2932bc4e4be1ac9059cb 645 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 6 645 48.408 T 11-11-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 Pfam PF06202 Amylo-alpha-1,6-glucosidase 600 700 4.7E-5 T 11-11-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 SUPERFAMILY SSF48208 548 976 1.36E-45 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 SUPERFAMILY SSF49785 176 286 9.22E-15 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 Gene3D G3DSA:2.60.120.260 193 294 7.1E-18 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 Gene3D G3DSA:1.50.10.10 608 709 1.3E-8 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 SUPERFAMILY SSF49785 15 169 1.32E-19 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS10570 eef4c6893d56a84c3916dd9f95bd41e2 1044 Pfam PF00754 F5/8 type C domain 182 290 6.8E-15 T 11-11-2016 IPR000421 Coagulation factor 5/8 C-terminal domain ATY42_RS19635 3ae3154249bff449af5f40cbd81b7db7 182 Pfam PF01609 Transposase DDE domain 69 132 1.5E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS19635 3ae3154249bff449af5f40cbd81b7db7 182 SUPERFAMILY SSF53098 12 146 3.34E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04640 3ae3154249bff449af5f40cbd81b7db7 182 Pfam PF01609 Transposase DDE domain 69 132 1.5E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04640 3ae3154249bff449af5f40cbd81b7db7 182 SUPERFAMILY SSF53098 12 146 3.34E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05380 ffdb8a525a34d12ae489ae739bff5ef4 212 Gene3D G3DSA:3.20.20.100 10 84 2.9E-13 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS05380 ffdb8a525a34d12ae489ae739bff5ef4 212 Gene3D G3DSA:3.20.20.100 99 175 8.6E-18 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS05380 ffdb8a525a34d12ae489ae739bff5ef4 212 SUPERFAMILY SSF51430 10 184 1.61E-22 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS05380 ffdb8a525a34d12ae489ae739bff5ef4 212 Pfam PF00248 Aldo/keto reductase family 95 174 5.1E-14 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS14270 ff668c4d88ae8fc289a98ced1963390b 198 Pfam PF03975 CheD chemotactic sensory transduction 66 164 8.6E-33 T 11-11-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ATY42_RS14270 ff668c4d88ae8fc289a98ced1963390b 198 SUPERFAMILY SSF64438 24 169 1.28E-50 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic ATY42_RS14270 ff668c4d88ae8fc289a98ced1963390b 198 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 18 169 29.723 T 11-11-2016 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ATY42_RS21445 247f375c7a8ec774cf2363e9fa04a3c9 186 Pfam PF02592 Putative vitamin uptake transporter 44 85 1.4E-7 T 11-11-2016 IPR003744 Protein of unknown function DUF165 ATY42_RS21445 247f375c7a8ec774cf2363e9fa04a3c9 186 Pfam PF02592 Putative vitamin uptake transporter 88 173 2.1E-17 T 11-11-2016 IPR003744 Protein of unknown function DUF165 ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 5 239 2.3E-115 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 Gene3D G3DSA:3.30.230.70 9 238 2.0E-30 T 11-11-2016 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 ProSitePatterns PS01277 Ribonuclease PH signature. 119 132 - T 11-11-2016 IPR018336 Ribonuclease PH, conserved site ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 Hamap MF_00564 Ribonuclease PH [rph]. 4 240 49.968 T 11-11-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 SUPERFAMILY SSF54211 5 184 2.63E-45 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 Pfam PF03725 3' exoribonuclease family, domain 2 161 227 1.8E-9 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 Pfam PF01138 3' exoribonuclease family, domain 1 13 143 3.5E-22 T 11-11-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS05570 b2af72d79761820e8f350e00e21fab34 241 SUPERFAMILY SSF55666 156 239 2.09E-24 T 11-11-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PIRSF PIRSF037495 8 443 3.6E-109 T 11-11-2016 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 7.7E-23 T 11-11-2016 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 278 300 7.7E-23 T 11-11-2016 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 7.7E-23 T 11-11-2016 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 17 36 7.7E-23 T 11-11-2016 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 7.7E-23 T 11-11-2016 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 Gene3D G3DSA:3.50.50.60 118 316 2.9E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 Gene3D G3DSA:3.50.50.60 14 117 5.8E-17 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 15 302 5.3E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 1.9E-14 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 1.9E-14 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 306 1.9E-14 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 16 38 1.9E-14 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS15745 1a02b2b03e037b015fa674667ce75edd 444 SUPERFAMILY SSF51905 9 321 7.2E-36 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18040 ea139b1d4018f0d385a0d6be2db294a9 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 198 1.7E-64 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18040 ea139b1d4018f0d385a0d6be2db294a9 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 201 29.477 T 11-11-2016 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18040 ea139b1d4018f0d385a0d6be2db294a9 201 Pfam PF00573 Ribosomal protein L4/L1 family 12 198 2.4E-55 T 11-11-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ATY42_RS18040 ea139b1d4018f0d385a0d6be2db294a9 201 Gene3D G3DSA:3.40.1370.10 53 201 1.1E-47 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 ATY42_RS18040 ea139b1d4018f0d385a0d6be2db294a9 201 SUPERFAMILY SSF52166 10 200 5.36E-62 T 11-11-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 ATY42_RS07340 4dd7cd187eb458b0993b315009adf03b 127 Pfam PF06123 Inner membrane protein CreD 1 57 7.8E-8 T 11-11-2016 IPR010364 Uncharacterised protein family, inner membrane CreD ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PIRSF PIRSF003161 1 329 3.0E-119 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 Pfam PF14841 FliG middle domain 111 184 1.5E-26 T 11-11-2016 IPR032779 Flagellar motor switch protein FliG, middle domain ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 Gene3D G3DSA:1.10.220.30 191 328 1.3E-39 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 Pfam PF01706 FliG C-terminal domain 215 320 1.8E-39 T 11-11-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 2 323 1.6E-102 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 SUPERFAMILY SSF48029 2 117 4.18E-25 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 268 294 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 30 56 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 110 133 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 1 17 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 244 264 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 191 216 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 PRINTS PR00954 Flagellar motor switch protein FliG signature 222 242 2.2E-65 T 11-11-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 Gene3D G3DSA:1.10.220.30 3 67 2.8E-18 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 Gene3D G3DSA:1.10.220.30 100 187 6.4E-31 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 SUPERFAMILY SSF48029 110 321 1.28E-67 T 11-11-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical ATY42_RS12900 36ce3b5c9feefc9a6b14a673d6e997fa 329 Pfam PF14842 FliG N-terminal domain 1 101 2.6E-32 T 11-11-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ATY42_RS00430 be9395d80c4ca06b4efae090dfcc81e3 169 Pfam PF09486 Bacterial type III secretion protein (HrpB7) 6 159 1.0E-33 T 11-11-2016 IPR013392 Type III secretion protein HrpB7 ATY42_RS00430 be9395d80c4ca06b4efae090dfcc81e3 169 TIGRFAM TIGR02559 HrpB7: type III secretion protein HrpB7 6 159 1.3E-41 T 11-11-2016 IPR013392 Type III secretion protein HrpB7 ATY42_RS07160 6b3ccad2b873c983f4e7943b4e7e205d 702 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 308 421 4.5E-14 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS07160 6b3ccad2b873c983f4e7943b4e7e205d 702 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 131 298 1.2E-13 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS15250 1ea47a60fcdd46b1ff82949df5c60568 438 Pfam PF00691 OmpA family 329 418 4.4E-13 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS15250 1ea47a60fcdd46b1ff82949df5c60568 438 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 57 266 1.3E-69 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU ATY42_RS15250 1ea47a60fcdd46b1ff82949df5c60568 438 Gene3D G3DSA:3.30.1330.60 317 434 1.5E-24 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS15250 1ea47a60fcdd46b1ff82949df5c60568 438 Pfam PF09850 Type VI secretion system protein DotU 60 260 2.4E-64 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU ATY42_RS15250 1ea47a60fcdd46b1ff82949df5c60568 438 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 297 433 4.4E-47 T 11-11-2016 IPR017733 Type VI secretion system peptidoglycan-associated domain ATY42_RS15250 1ea47a60fcdd46b1ff82949df5c60568 438 SUPERFAMILY SSF103088 321 436 4.97E-25 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS14355 82799fba37e1b5e9ee1c4eedaf8813b6 315 PIRSF PIRSF031767 10 315 4.1E-117 T 11-11-2016 IPR012379 LytTR MHYE transcriptional regulator, putative ATY42_RS14355 82799fba37e1b5e9ee1c4eedaf8813b6 315 SMART SM00850 205 302 4.1E-27 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ATY42_RS14355 82799fba37e1b5e9ee1c4eedaf8813b6 315 Pfam PF04397 LytTr DNA-binding domain 208 300 1.3E-21 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ATY42_RS14355 82799fba37e1b5e9ee1c4eedaf8813b6 315 Gene3D G3DSA:2.40.50.40 197 263 1.0E-13 T 11-11-2016 ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 314 35.878 T 11-11-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 Gene3D G3DSA:3.40.50.300 138 313 2.6E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 SUPERFAMILY SSF75138 10 136 4.84E-30 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 Pfam PF02603 HPr Serine kinase N terminus 5 132 6.9E-23 T 11-11-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 309 3.0E-100 T 11-11-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 SUPERFAMILY SSF53795 137 306 5.19E-32 T 11-11-2016 ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 Gene3D G3DSA:3.40.1390.20 10 135 5.1E-28 T 11-11-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like ATY42_RS06285 036d71ffc8f05316f417095fda178531 316 Pfam PF07475 HPr Serine kinase C-terminal domain 135 306 1.6E-56 T 11-11-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 Pfam PF00231 ATP synthase 5 286 3.9E-92 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.9E-105 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.605 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 Gene3D G3DSA:1.10.287.80 236 282 5.0E-30 T 11-11-2016 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 Gene3D G3DSA:1.10.287.80 19 60 7.8E-39 T 11-11-2016 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 Gene3D G3DSA:1.10.287.80 202 235 7.8E-39 T 11-11-2016 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 6.2E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 PRINTS PR00126 ATP synthase gamma subunit signature 167 184 6.2E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 6.2E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 6.2E-38 T 11-11-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 SUPERFAMILY SSF52943 3 287 2.09E-93 T 11-11-2016 IPR023633 ATPase, F1 complex, gamma subunit domain Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 11-11-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210 ATY42_RS03525 91bc9ff91fc6f5fbe5723b83ee2d44d6 287 Gene3D G3DSA:3.40.1380.10 64 192 4.3E-43 T 11-11-2016 ATY42_RS12105 e9098b4a897f5d37573f73d0aab7cb84 106 Pfam PF00005 ABC transporter 11 54 1.2E-6 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS12105 e9098b4a897f5d37573f73d0aab7cb84 106 Gene3D G3DSA:3.40.50.300 9 84 5.0E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12105 e9098b4a897f5d37573f73d0aab7cb84 106 SUPERFAMILY SSF52540 10 84 1.0E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07875 9abcb578aab8533ed7a58d49bc15df3d 252 Gene3D G3DSA:3.40.50.1000 169 250 2.1E-38 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07875 9abcb578aab8533ed7a58d49bc15df3d 252 Gene3D G3DSA:3.40.50.1000 18 93 2.1E-38 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07875 9abcb578aab8533ed7a58d49bc15df3d 252 Pfam PF02358 Trehalose-phosphatase 21 235 1.2E-33 T 11-11-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ATY42_RS07875 9abcb578aab8533ed7a58d49bc15df3d 252 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 19 247 4.5E-39 T 11-11-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 ATY42_RS07875 9abcb578aab8533ed7a58d49bc15df3d 252 SUPERFAMILY SSF56784 19 248 7.24E-40 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07875 9abcb578aab8533ed7a58d49bc15df3d 252 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 20 208 2.9E-18 T 11-11-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 573 693 1.0E-11 T 11-11-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 Gene3D G3DSA:3.40.50.300 15 166 3.8E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 Gene3D G3DSA:1.10.8.60 167 242 2.6E-26 T 11-11-2016 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 SMART SM00382 37 188 1.8E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 7.3E-125 T 11-11-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 2.0E-5 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 2.0E-5 T 11-11-2016 IPR001270 ClpA/B family GO:0005524 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 359 1.2E-23 T 11-11-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.8E-45 T 11-11-2016 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 SUPERFAMILY SSF48019 243 360 1.7E-28 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 Gene3D G3DSA:1.20.272.10 243 358 3.8E-37 T 11-11-2016 ATY42_RS05140 1efb9b374254d3f932655280218cf365 698 SUPERFAMILY SSF52540 34 223 1.22E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 Gene3D G3DSA:1.10.230.10 282 374 2.2E-41 T 11-11-2016 IPR016143 Citrate synthase-like, small alpha subdomain Reactome: R-HSA-163765|Reactome: R-HSA-75105 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 Pfam PF00285 Citrate synthase, C-terminal domain 47 412 7.3E-136 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PRINTS PR00143 Citrate synthase signature 297 317 1.0E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PRINTS PR00143 Citrate synthase signature 360 376 1.0E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PRINTS PR00143 Citrate synthase signature 380 394 1.0E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PRINTS PR00143 Citrate synthase signature 242 270 1.0E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PRINTS PR00143 Citrate synthase signature 220 235 1.0E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PRINTS PR00143 Citrate synthase signature 166 179 1.0E-54 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 PIRSF PIRSF001369 38 429 1.3E-161 T 11-11-2016 IPR024176 Citrate synthase, bacterial-type ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 423 6.2E-207 T 11-11-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 SUPERFAMILY SSF48256 8 429 2.09E-166 T 11-11-2016 IPR002020 Citrate synthase GO:0046912 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 11-11-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATY42_RS05625 ee251147aa5c30f57ac839b26c5750d3 429 Gene3D G3DSA:1.10.580.10 53 281 8.3E-99 T 11-11-2016 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 Pfam PF00361 Proton-conducting membrane transporter 139 421 1.4E-86 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 438 457 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 261 287 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 88 113 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 116 136 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 329 341 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 239 260 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 163 184 5.0E-65 T 11-11-2016 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 70 127 1.1E-24 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 90 110 1.4E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 437 459 1.4E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 517 538 1.4E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 279 301 1.4E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 64 88 1.4E-15 T 11-11-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ATY42_RS16200 e9609a62ab16bb7ad9019e2e7dbd07a0 719 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 9 714 3.9E-234 T 11-11-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 484 81.663 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 SUPERFAMILY SSF54631 94 202 3.92E-27 T 11-11-2016 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 Pfam PF00571 CBS domain 148 200 2.9E-5 T 11-11-2016 IPR000644 CBS domain ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 Pfam PF00571 CBS domain 95 139 5.8E-11 T 11-11-2016 IPR000644 CBS domain ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 452 2.1E-187 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 294 306 - T 11-11-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 471 8.6E-157 T 11-11-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 SMART SM00116 96 143 3.8E-11 T 11-11-2016 IPR000644 CBS domain ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 SMART SM00116 157 205 1.5E-7 T 11-11-2016 IPR000644 CBS domain ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 SMART SM01240 7 471 0.0 T 11-11-2016 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 PIRSF PIRSF000130 1 485 8.9E-201 T 11-11-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 SUPERFAMILY SSF51412 216 475 4.84E-124 T 11-11-2016 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 SUPERFAMILY SSF51412 2 90 4.84E-124 T 11-11-2016 ATY42_RS10695 ff6e8d51fd69e31526a1aea908c00f0f 485 Gene3D G3DSA:3.20.20.70 2 483 2.8E-197 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS19325 436ea1ad32ab56b5e09a8e2b42178fa9 122 Pfam PF02021 Uncharacterised protein family UPF0102 13 101 6.5E-22 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 ATY42_RS19325 436ea1ad32ab56b5e09a8e2b42178fa9 122 SUPERFAMILY SSF52980 7 105 9.65E-16 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS19325 436ea1ad32ab56b5e09a8e2b42178fa9 122 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 5 118 1.6E-32 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 ATY42_RS19325 436ea1ad32ab56b5e09a8e2b42178fa9 122 Hamap MF_00048 UPF0102 protein YraN [yraN]. 5 116 21.933 T 11-11-2016 IPR003509 Uncharacterised protein family UPF0102 ATY42_RS19325 436ea1ad32ab56b5e09a8e2b42178fa9 122 Gene3D G3DSA:3.40.1350.10 13 121 1.4E-32 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 SUPERFAMILY SSF52540 59 113 2.95E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 SUPERFAMILY SSF52540 470 484 2.95E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 SUPERFAMILY SSF52540 216 296 2.95E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 SUPERFAMILY SSF52540 516 686 2.95E-15 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 Pfam PF13307 Helicase C-terminal domain 546 704 7.4E-31 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 Gene3D G3DSA:3.40.50.300 233 278 1.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 Gene3D G3DSA:3.40.50.300 46 145 1.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 SMART SM00491 560 691 6.7E-29 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ATY42_RS01875 6e62474e154a8fffdeafbb70c9509da4 710 Gene3D G3DSA:3.40.50.300 545 688 1.6E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 Pfam PF00849 RNA pseudouridylate synthase 109 262 1.7E-25 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 SUPERFAMILY SSF55174 27 78 7.4E-9 T 11-11-2016 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 Gene3D G3DSA:3.10.290.10 28 76 6.3E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 326 2.7E-73 T 11-11-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 SMART SM00363 28 90 6.7E-7 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 Pfam PF01479 S4 domain 28 74 9.1E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 146 160 - T 11-11-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS15415 15158904ea2d1946938629e62d5ed275 328 SUPERFAMILY SSF55120 97 327 3.04E-55 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS17630 490d1a1689ea0885567f01e0b996c54f 222 Gene3D G3DSA:3.90.1580.10 43 222 1.7E-32 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS17630 490d1a1689ea0885567f01e0b996c54f 222 Pfam PF03781 Sulfatase-modifying factor enzyme 1 51 222 4.1E-29 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS17630 490d1a1689ea0885567f01e0b996c54f 222 SUPERFAMILY SSF56436 52 222 6.75E-34 T 11-11-2016 IPR016187 C-type lectin fold ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 287 392 6.1E-11 T 11-11-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 186 199 2.1E-10 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 2.1E-10 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 74 86 2.1E-10 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 54 72 2.1E-10 T 11-11-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 Gene3D G3DSA:3.20.20.10 34 271 8.4E-59 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 SUPERFAMILY SSF51419 31 283 7.72E-62 T 11-11-2016 IPR029066 PLP-binding barrel ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 Gene3D G3DSA:2.40.37.10 272 394 7.7E-28 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 280 2.9E-28 T 11-11-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ATY42_RS06655 af5b0e37887074e89e1877652b39a0fa 398 SUPERFAMILY SSF50621 265 393 8.37E-38 T 11-11-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 3.8E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 3.8E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 3.8E-11 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 SUPERFAMILY SSF51735 16 262 1.78E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03400 327858a37c54256f733d560923d8154e 268 Gene3D G3DSA:3.40.50.720 14 262 5.8E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.7E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 2.7E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.7E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.7E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 2.7E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 2.7E-39 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS03400 327858a37c54256f733d560923d8154e 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 24 262 8.8E-61 T 11-11-2016 ATY42_RS03400 327858a37c54256f733d560923d8154e 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS23035 a61294900e918d505629fa451e037c05 446 Gene3D G3DSA:2.40.160.60 31 446 2.2E-111 T 11-11-2016 ATY42_RS23035 a61294900e918d505629fa451e037c05 446 SUPERFAMILY SSF56935 29 446 4.21E-86 T 11-11-2016 ATY42_RS23035 a61294900e918d505629fa451e037c05 446 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 20 446 4.7E-129 T 11-11-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) ATY42_RS07355 b9724782c4dea61fba3e3c4097e7034a 270 Pfam PF00112 Papain family cysteine protease 54 255 4.0E-11 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ATY42_RS07355 b9724782c4dea61fba3e3c4097e7034a 270 SMART SM00645 53 267 1.1E-5 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ATY42_RS07355 b9724782c4dea61fba3e3c4097e7034a 270 SUPERFAMILY SSF54001 39 266 1.58E-37 T 11-11-2016 ATY42_RS07355 b9724782c4dea61fba3e3c4097e7034a 270 Gene3D G3DSA:3.90.70.10 47 263 9.1E-31 T 11-11-2016 ATY42_RS06420 3ac633f0d30c86be0f09e16dff5a5a95 110 Pfam PF12836 Helix-hairpin-helix motif 26 86 7.8E-22 T 11-11-2016 ATY42_RS06420 3ac633f0d30c86be0f09e16dff5a5a95 110 SUPERFAMILY SSF47781 25 91 2.78E-25 T 11-11-2016 IPR010994 RuvA domain 2-like ATY42_RS06420 3ac633f0d30c86be0f09e16dff5a5a95 110 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 26 86 2.7E-22 T 11-11-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ATY42_RS06420 3ac633f0d30c86be0f09e16dff5a5a95 110 Gene3D G3DSA:1.10.150.320 25 95 1.4E-17 T 11-11-2016 ATY42_RS03135 cea2055e3972ac5130157921b58ca741 125 SMART SM00850 26 124 1.9E-21 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ATY42_RS03135 cea2055e3972ac5130157921b58ca741 125 Pfam PF04397 LytTr DNA-binding domain 27 121 4.9E-21 T 11-11-2016 IPR007492 LytTR DNA-binding domain GO:0003677 ATY42_RS03135 cea2055e3972ac5130157921b58ca741 125 Gene3D G3DSA:2.40.50.40 19 85 4.1E-16 T 11-11-2016 ATY42_RS04530 f74de2c07788397a3c6162d356956f76 374 Gene3D G3DSA:3.40.50.1100 84 320 3.3E-56 T 11-11-2016 ATY42_RS04530 f74de2c07788397a3c6162d356956f76 374 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 37 300 4.4E-71 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS04530 f74de2c07788397a3c6162d356956f76 374 SUPERFAMILY SSF53686 22 315 1.11E-78 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS12800 599a4e95a636d449ed3eea122b4b0586 441 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 214 429 5.9E-48 T 11-11-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 ATY42_RS12800 599a4e95a636d449ed3eea122b4b0586 441 Pfam PF07196 Flagellin hook IN motif 124 177 5.1E-8 T 11-11-2016 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 ATY42_RS12800 599a4e95a636d449ed3eea122b4b0586 441 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 2.4E-17 T 11-11-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 SUPERFAMILY SSF53474 504 763 1.04E-51 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 Gene3D G3DSA:2.140.10.30 58 501 7.1E-68 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 Pfam PF00326 Prolyl oligopeptidase family 569 764 3.5E-49 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 SUPERFAMILY SSF82171 177 502 5.76E-36 T 11-11-2016 ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 SUPERFAMILY SSF82171 42 98 5.76E-36 T 11-11-2016 ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 Gene3D G3DSA:3.40.50.1820 504 764 2.4E-55 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS15710 7e6d6b3c806c0fac954ec60a70290044 779 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 174 473 4.3E-67 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS14605 dd94d8636b9f2e0f16b63116cb4482e6 269 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 9 254 6.1E-84 T 11-11-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS14605 dd94d8636b9f2e0f16b63116cb4482e6 269 SUPERFAMILY SSF53613 9 263 5.46E-72 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS14605 dd94d8636b9f2e0f16b63116cb4482e6 269 Pfam PF08543 Phosphomethylpyrimidine kinase 16 254 4.7E-83 T 11-11-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-964975 ATY42_RS14605 dd94d8636b9f2e0f16b63116cb4482e6 269 Gene3D G3DSA:3.40.1190.20 9 257 6.5E-91 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 1.2E-47 T 11-11-2016 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 1 527 1.4E-252 T 11-11-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 Gene3D G3DSA:2.40.30.10 290 392 8.6E-23 T 11-11-2016 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 525 52.79 T 11-11-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 157 1.2E-20 T 11-11-2016 IPR005225 Small GTP-binding protein domain GO:0005525 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 Pfam PF16658 Class II release factor RF3, C-terminal domain 385 512 5.3E-46 T 11-11-2016 IPR032090 Peptide chain release factor 3, C-terminal ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-11-2016 IPR031157 Tr-type G domain, conserved site ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 Gene3D G3DSA:3.30.70.870 393 462 1.2E-12 T 11-11-2016 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 Gene3D G3DSA:3.40.50.300 7 280 6.7E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 PRINTS PR00315 GTP-binding elongation factor signature 63 71 2.2E-11 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 PRINTS PR00315 GTP-binding elongation factor signature 83 93 2.2E-11 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 PRINTS PR00315 GTP-binding elongation factor signature 13 26 2.2E-11 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 PRINTS PR00315 GTP-binding elongation factor signature 135 144 2.2E-11 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 PRINTS PR00315 GTP-binding elongation factor signature 99 110 2.2E-11 T 11-11-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 SUPERFAMILY SSF50447 259 391 1.91E-29 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 SUPERFAMILY SSF52540 8 275 7.53E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08815 e635edf8063c8bd61e309d237d989c78 534 SUPERFAMILY SSF54980 391 466 4.68E-17 T 11-11-2016 IPR009022 Elongation factor G, III-V domain ATY42_RS04090 cd4c1e01277c50d9c7c5a9ac7eaf60bd 169 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 21 156 3.1E-13 T 11-11-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 ATY42_RS04090 cd4c1e01277c50d9c7c5a9ac7eaf60bd 169 Pfam PF12019 Type II transport protein GspH 63 153 1.3E-5 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ATY42_RS04090 cd4c1e01277c50d9c7c5a9ac7eaf60bd 169 SUPERFAMILY SSF54523 26 148 3.85E-9 T 11-11-2016 ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 SUPERFAMILY SSF51197 4 308 4.67E-85 T 11-11-2016 ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 5 122 3.7E-30 T 11-11-2016 IPR026992 Non-haem dioxygenase N-terminal domain ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 PRINTS PR00682 Isopenicillin N synthase signature 191 212 1.7E-8 T 11-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 PRINTS PR00682 Isopenicillin N synthase signature 227 253 1.7E-8 T 11-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 PRINTS PR00682 Isopenicillin N synthase signature 24 41 1.7E-8 T 11-11-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 174 271 4.5E-16 T 11-11-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ATY42_RS16320 71af60b79852cdadec7206deb58f77ec 312 Gene3D G3DSA:2.60.120.330 3 308 1.4E-89 T 11-11-2016 IPR027443 Isopenicillin N synthase-like ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-11-2016 IPR018253 DnaJ domain, conserved site ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 Gene3D G3DSA:2.60.260.20 134 188 5.1E-10 T 11-11-2016 ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 SUPERFAMILY SSF49493 137 212 4.19E-11 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 Pfam PF01556 DnaJ C terminal domain 143 276 1.7E-26 T 11-11-2016 IPR002939 Chaperone DnaJ, C-terminal ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 Gene3D G3DSA:1.10.287.110 2 91 2.9E-31 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 SMART SM00271 4 61 3.1E-26 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 Pfam PF00226 DnaJ domain 5 66 4.5E-24 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 PRINTS PR00625 DnaJ domain signature 41 61 5.8E-22 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 PRINTS PR00625 DnaJ domain signature 25 40 5.8E-22 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 PRINTS PR00625 DnaJ domain signature 61 80 5.8E-22 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 PRINTS PR00625 DnaJ domain signature 7 25 5.8E-22 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 Gene3D G3DSA:2.60.260.20 202 276 2.4E-14 T 11-11-2016 ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 SUPERFAMILY SSF46565 1 106 1.57E-30 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS04385 91ad09b7fc6108071ee4966ecb4703ee 299 SUPERFAMILY SSF49493 205 287 9.03E-16 T 11-11-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ATY42_RS17515 86eee731d2b0bec17682db0ce0f1dc87 162 Gene3D G3DSA:1.25.40.10 4 66 1.6E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS17515 86eee731d2b0bec17682db0ce0f1dc87 162 SUPERFAMILY SSF48452 3 70 9.91E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 Pfam PF00313 'Cold-shock' DNA-binding domain 8 70 1.8E-27 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 SMART SM00357 8 71 2.9E-27 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 Gene3D G3DSA:2.40.50.140 6 71 2.6E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 PIRSF PIRSF002599 2 71 5.4E-22 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 ProSitePatterns PS00352 'Cold-shock' domain signature. 20 38 - T 11-11-2016 IPR019844 Cold-shock conserved site ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 SUPERFAMILY SSF50249 4 70 2.14E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 PRINTS PR00050 Cold shock protein signature 29 38 6.4E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 PRINTS PR00050 Cold shock protein signature 9 24 6.4E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS07415 6e1fc5c9f1de30fe63a0c3ccc8baebf1 71 PRINTS PR00050 Cold shock protein signature 44 62 6.4E-18 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS21790 329015639be636561110eaae33db8282 78 SMART SM00388 10 71 2.5E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS21790 329015639be636561110eaae33db8282 78 Pfam PF00512 His Kinase A (phospho-acceptor) domain 10 66 1.4E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS21790 329015639be636561110eaae33db8282 78 SUPERFAMILY SSF47384 4 68 1.37E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS21790 329015639be636561110eaae33db8282 78 Gene3D G3DSA:1.10.287.130 4 64 1.7E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01380 36cf61b5af5236a85a322acb7aefae9c 352 PRINTS PR01805 VacJ lipoprotein signature 225 242 1.5E-22 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 ATY42_RS01380 36cf61b5af5236a85a322acb7aefae9c 352 PRINTS PR01805 VacJ lipoprotein signature 121 134 1.5E-22 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 ATY42_RS01380 36cf61b5af5236a85a322acb7aefae9c 352 PRINTS PR01805 VacJ lipoprotein signature 138 154 1.5E-22 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 ATY42_RS01380 36cf61b5af5236a85a322acb7aefae9c 352 PRINTS PR01805 VacJ lipoprotein signature 189 206 1.5E-22 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 ATY42_RS01380 36cf61b5af5236a85a322acb7aefae9c 352 Pfam PF04333 MlaA lipoprotein 120 311 3.8E-70 T 11-11-2016 IPR007428 MlaA lipoprotein GO:0016020 ATY42_RS21930 575adc6a58d97fc887f1fbd2064fed4d 131 Gene3D G3DSA:3.10.450.50 7 127 2.6E-43 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS21930 575adc6a58d97fc887f1fbd2064fed4d 131 SUPERFAMILY SSF54427 8 126 1.67E-24 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS21930 575adc6a58d97fc887f1fbd2064fed4d 131 Pfam PF11533 Protein of unknown function (DUF3225) 7 127 7.7E-41 T 11-11-2016 IPR024507 Protein of unknown function DUF3225 ATY42_RS07600 632f2f8b5512dc322dc2d3253326b2c7 80 Pfam PF13275 S4 domain 7 69 5.2E-23 T 11-11-2016 ATY42_RS07600 632f2f8b5512dc322dc2d3253326b2c7 80 Gene3D G3DSA:3.10.290.10 1 70 1.8E-25 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS07600 632f2f8b5512dc322dc2d3253326b2c7 80 SUPERFAMILY SSF55174 4 69 5.0E-17 T 11-11-2016 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 Pfam PF13396 Phospholipase_D-nuclease N-terminal 25 57 1.1E-4 T 11-11-2016 IPR027379 Cardiolipin synthase N-terminal ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 SMART SM00155 214 241 0.015 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 SMART SM00155 385 412 2.1 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 Pfam PF13091 PLD-like domain 314 435 2.0E-21 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 Pfam PF13091 PLD-like domain 130 271 3.3E-20 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 Gene3D G3DSA:3.30.870.10 109 302 7.6E-40 T 11-11-2016 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 SUPERFAMILY SSF56024 263 459 1.53E-44 T 11-11-2016 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 18 469 2.2E-99 T 11-11-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 SUPERFAMILY SSF56024 104 301 2.88E-46 T 11-11-2016 ATY42_RS22955 d87c19acfa42f173214b3daad9918b98 472 Gene3D G3DSA:3.30.870.10 306 449 1.4E-32 T 11-11-2016 ATY42_RS00440 313e2eb032c2961a8a84d13c967a054e 233 Gene3D G3DSA:1.20.5.620 42 78 5.1E-4 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain ATY42_RS00440 313e2eb032c2961a8a84d13c967a054e 233 TIGRFAM TIGR02499 HrpE_YscL_not: type III secretion apparatus protein, HrpE/YscL family 47 206 8.4E-38 T 11-11-2016 IPR012842 Type III secretion system HrpE/YscL ATY42_RS00440 313e2eb032c2961a8a84d13c967a054e 233 Pfam PF02108 Flagellar assembly protein FliH 116 213 3.4E-9 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 SUPERFAMILY SSF55486 248 497 3.08E-71 T 11-11-2016 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 SUPERFAMILY SSF63737 39 238 5.75E-49 T 11-11-2016 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 Gene3D G3DSA:1.10.390.10 350 497 1.2E-45 T 11-11-2016 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 173 188 1.2E-23 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 337 352 1.2E-23 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 356 368 1.2E-23 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 221 236 1.2E-23 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 1.2E-23 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 Pfam PF01433 Peptidase family M1 42 429 9.9E-120 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS04415 b49ee04e861b6369f04b9efa02fa0f27 890 Pfam PF11838 ERAP1-like C-terminal domain 560 868 8.3E-41 T 11-11-2016 IPR024571 ERAP1-like C-terminal domain ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 11-11-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Pfam PF02954 Bacterial regulatory protein, Fis family 407 446 1.0E-14 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 412 429 3.1E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 429 448 3.1E-13 T 11-11-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 SMART SM00448 2 115 5.2E-29 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 SUPERFAMILY SSF52540 143 383 3.11E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 SUPERFAMILY SSF52172 2 187 2.7E-38 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 SMART SM00382 163 306 1.1E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Pfam PF00158 Sigma-54 interaction domain 143 310 2.3E-68 T 11-11-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 SUPERFAMILY SSF46689 352 448 1.16E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Pfam PF00072 Response regulator receiver domain 4 115 1.7E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Gene3D G3DSA:1.10.8.60 316 388 2.9E-23 T 11-11-2016 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Gene3D G3DSA:3.40.50.2300 2 125 1.2E-31 T 11-11-2016 ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Gene3D G3DSA:3.40.50.300 140 315 6.0E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-11-2016 IPR025944 Sigma-54 interaction domain, conserved site ATY42_RS21160 246229552fd1f58c35077571d41f3a32 448 Gene3D G3DSA:1.10.10.60 396 448 1.2E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 SMART SM00357 3 67 8.4E-31 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 2.5E-31 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 4 19 1.1E-17 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 25 34 1.1E-17 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 PRINTS PR00050 Cold shock protein signature 40 58 1.1E-17 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-11-2016 IPR019844 Cold-shock conserved site ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 Gene3D G3DSA:2.40.50.140 1 65 1.9E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 SUPERFAMILY SSF50249 1 67 3.86E-25 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS09060 4a7f470e18c75cc7b5b654b4af364fa7 68 PIRSF PIRSF002599 1 68 6.2E-25 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 ATY42_RS12640 c04387f308a72743fa28c27b9afb1aa5 110 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 6 109 2.6E-5 T 11-11-2016 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 ATY42_RS12640 c04387f308a72743fa28c27b9afb1aa5 110 Gene3D G3DSA:3.40.50.720 4 108 3.6E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12640 c04387f308a72743fa28c27b9afb1aa5 110 SUPERFAMILY SSF51735 4 108 6.02E-20 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12685 95bf6e3723e3903ba7687300d3d87b06 396 SUPERFAMILY SSF58104 57 342 2.49E-44 T 11-11-2016 ATY42_RS12685 95bf6e3723e3903ba7687300d3d87b06 396 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 143 340 9.3E-31 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS12685 95bf6e3723e3903ba7687300d3d87b06 396 Gene3D G3DSA:1.10.287.950 107 309 2.0E-42 T 11-11-2016 ATY42_RS12685 95bf6e3723e3903ba7687300d3d87b06 396 SMART SM00283 89 350 1.6E-11 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS20160 d18d1bdbf6f101bdffbc6967c91d2218 200 SMART SM00267 8 178 1.6E-37 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20160 d18d1bdbf6f101bdffbc6967c91d2218 200 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 18 176 1.4E-38 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20160 d18d1bdbf6f101bdffbc6967c91d2218 200 SUPERFAMILY SSF55073 24 178 1.18E-38 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS20160 d18d1bdbf6f101bdffbc6967c91d2218 200 Pfam PF00990 Diguanylate cyclase, GGDEF domain 19 174 6.3E-36 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20160 d18d1bdbf6f101bdffbc6967c91d2218 200 Gene3D G3DSA:3.30.70.270 21 180 4.3E-47 T 11-11-2016 ATY42_RS18540 6b9686c05e5750db4a98589b758f19fe 214 SUPERFAMILY SSF53254 1 203 3.01E-54 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS18540 6b9686c05e5750db4a98589b758f19fe 214 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 11-11-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 ATY42_RS18540 6b9686c05e5750db4a98589b758f19fe 214 SMART SM00855 2 158 5.1E-22 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS18540 6b9686c05e5750db4a98589b758f19fe 214 Gene3D G3DSA:3.40.50.1240 1 203 9.1E-59 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS18540 6b9686c05e5750db4a98589b758f19fe 214 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 198 8.2E-57 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS04130 d7471e2336e761f9b22c049f74d1cae4 279 Gene3D G3DSA:3.90.550.10 8 218 4.6E-8 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS04130 d7471e2336e761f9b22c049f74d1cae4 279 SUPERFAMILY SSF53448 8 245 1.8E-14 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS04810 508982cc8a59d9c0209ce0a312a95bf1 128 Pfam PF13586 Transposase DDE domain 42 124 1.2E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS05095 6a46ae3b4b9694779b52537e74da77fb 249 SUPERFAMILY SSF56112 46 200 7.42E-16 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS05095 6a46ae3b4b9694779b52537e74da77fb 249 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 40 241 1.4E-66 T 11-11-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 ATY42_RS05095 6a46ae3b4b9694779b52537e74da77fb 249 Gene3D G3DSA:1.10.510.10 157 229 9.2E-11 T 11-11-2016 ATY42_RS05095 6a46ae3b4b9694779b52537e74da77fb 249 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 10 243 38.309 T 11-11-2016 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 ATY42_RS08215 61ec035525b402670ca197600210745f 152 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 19 131 5.3E-31 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ATY42_RS08215 61ec035525b402670ca197600210745f 152 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 16 138 1.3E-50 T 11-11-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 ATY42_RS08215 61ec035525b402670ca197600210745f 152 Pfam PF03061 Thioesterase superfamily 30 114 1.7E-17 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 ATY42_RS08215 61ec035525b402670ca197600210745f 152 PIRSF PIRSF003230 9 149 9.9E-40 T 11-11-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ATY42_RS08215 61ec035525b402670ca197600210745f 152 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 21 38 - T 11-11-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 ATY42_RS08215 61ec035525b402670ca197600210745f 152 Gene3D G3DSA:3.10.129.10 13 144 2.6E-44 T 11-11-2016 IPR029069 HotDog domain ATY42_RS08215 61ec035525b402670ca197600210745f 152 SUPERFAMILY SSF54637 13 144 1.55E-38 T 11-11-2016 IPR029069 HotDog domain ATY42_RS12140 d8bfd10fe4e3f08d611e11f95b035e63 317 Pfam PF07920 Protein of unknown function (DUF1684) 174 310 4.6E-42 T 11-11-2016 IPR012467 Protein of unknown function DUF1684 ATY42_RS08230 74514cb7064112037cb3bce4eb1b79e8 346 TIGRFAM TIGR02794 tolA_full: protein TolA 18 340 2.2E-44 T 11-11-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 ATY42_RS08230 74514cb7064112037cb3bce4eb1b79e8 346 Gene3D G3DSA:3.30.1150.10 232 345 7.0E-20 T 11-11-2016 ATY42_RS08230 74514cb7064112037cb3bce4eb1b79e8 346 Pfam PF13103 TonB C terminal 257 341 3.3E-8 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS08230 74514cb7064112037cb3bce4eb1b79e8 346 SUPERFAMILY SSF74653 254 342 3.73E-11 T 11-11-2016 ATY42_RS15940 403c498e303f694496bdd32728e542bd 380 Pfam PF00534 Glycosyl transferases group 1 190 331 6.0E-24 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS15940 403c498e303f694496bdd32728e542bd 380 SUPERFAMILY SSF53756 2 370 8.9E-60 T 11-11-2016 ATY42_RS15940 403c498e303f694496bdd32728e542bd 380 Gene3D G3DSA:3.40.50.2000 182 343 1.7E-19 T 11-11-2016 ATY42_RS15940 403c498e303f694496bdd32728e542bd 380 Pfam PF13439 Glycosyltransferase Family 4 14 179 6.5E-17 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATY42_RS14935 45595ea368e2e7e51759f7729c03ef77 232 Gene3D G3DSA:3.40.50.150 13 199 5.3E-31 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14935 45595ea368e2e7e51759f7729c03ef77 232 SUPERFAMILY SSF53335 15 205 1.82E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14935 45595ea368e2e7e51759f7729c03ef77 232 Pfam PF08241 Methyltransferase domain 50 147 2.1E-19 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ATY42_RS05575 f3299a1a5269ecbe1c089a23ddc4597d 286 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 286 8.0E-81 T 11-11-2016 IPR005229 Conserved hypothetical protein CHP00255 ATY42_RS05575 f3299a1a5269ecbe1c089a23ddc4597d 286 Pfam PF08340 Domain of unknown function (DUF1732) 202 286 4.9E-35 T 11-11-2016 IPR013551 Domain of unknown function DUF1732 ATY42_RS05575 f3299a1a5269ecbe1c089a23ddc4597d 286 Pfam PF03755 YicC-like family, N-terminal region 2 152 4.6E-35 T 11-11-2016 IPR013527 YicC-like, N-terminal ATY42_RS06210 79338bc2d803634b50277a9ce71ae697 465 SUPERFAMILY SSF50494 230 462 2.5E-36 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS06210 79338bc2d803634b50277a9ce71ae697 465 Gene3D G3DSA:2.40.10.10 257 384 7.3E-41 T 11-11-2016 ATY42_RS06210 79338bc2d803634b50277a9ce71ae697 465 Pfam PF13365 Trypsin-like peptidase domain 268 420 9.2E-9 T 11-11-2016 ATY42_RS14890 8ddfabb70cef0cc40ab5398864ccc33f 471 Gene3D G3DSA:1.20.1250.20 282 467 1.9E-15 T 11-11-2016 ATY42_RS14890 8ddfabb70cef0cc40ab5398864ccc33f 471 Gene3D G3DSA:1.20.1250.20 33 227 3.7E-20 T 11-11-2016 ATY42_RS14890 8ddfabb70cef0cc40ab5398864ccc33f 471 ProSitePatterns PS00217 Sugar transport proteins signature 2. 138 163 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS14890 8ddfabb70cef0cc40ab5398864ccc33f 471 SUPERFAMILY SSF103473 20 469 9.94E-56 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS14890 8ddfabb70cef0cc40ab5398864ccc33f 471 Pfam PF00083 Sugar (and other) transporter 39 469 5.9E-28 T 11-11-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATY42_RS14890 8ddfabb70cef0cc40ab5398864ccc33f 471 ProSitePatterns PS00216 Sugar transport proteins signature 1. 96 112 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS07850 593833bc652bb19956cc2c622306c46c 268 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 33 266 9.7E-53 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase ATY42_RS07850 593833bc652bb19956cc2c622306c46c 268 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 23 265 1.8E-68 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase ATY42_RS07850 593833bc652bb19956cc2c622306c46c 268 Gene3D G3DSA:3.60.140.10 6 266 3.0E-91 T 11-11-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase ATY42_RS07850 593833bc652bb19956cc2c622306c46c 268 SUPERFAMILY SSF64438 5 266 1.81E-74 T 11-11-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic ATY42_RS04755 c05932943f3591148974b44607778d0b 144 SUPERFAMILY SSF53098 3 131 7.97E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04755 c05932943f3591148974b44607778d0b 144 Pfam PF00665 Integrase core domain 3 89 9.4E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS04755 c05932943f3591148974b44607778d0b 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS04755 c05932943f3591148974b44607778d0b 144 Gene3D G3DSA:3.30.420.10 3 125 1.2E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08850 541306c498541e5b9d26102a5e1d8208 189 Pfam PF04264 YceI-like domain 47 184 2.4E-24 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS08850 541306c498541e5b9d26102a5e1d8208 189 Gene3D G3DSA:2.40.128.110 36 187 1.7E-30 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS08850 541306c498541e5b9d26102a5e1d8208 189 SMART SM00867 29 187 3.6E-38 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS08850 541306c498541e5b9d26102a5e1d8208 189 SUPERFAMILY SSF101874 31 187 1.26E-33 T 11-11-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ATY42_RS02070 663445f529adf44149360dc588a31d11 177 SUPERFAMILY SSF81342 2 176 4.16E-35 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATY42_RS02070 663445f529adf44149360dc588a31d11 177 Pfam PF01292 Prokaryotic cytochrome b561 7 173 2.1E-28 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ATY42_RS02070 663445f529adf44149360dc588a31d11 177 Gene3D G3DSA:1.20.950.20 5 175 9.1E-6 T 11-11-2016 ATY42_RS03590 caad3d814e6e2f4bdaad40773696f7f7 423 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 94 328 6.9E-11 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS03590 caad3d814e6e2f4bdaad40773696f7f7 423 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 213 422 1.4E-30 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS03590 caad3d814e6e2f4bdaad40773696f7f7 423 Gene3D G3DSA:2.40.50.100 239 271 3.5E-7 T 11-11-2016 ATY42_RS03590 caad3d814e6e2f4bdaad40773696f7f7 423 Gene3D G3DSA:2.40.50.100 95 114 3.5E-7 T 11-11-2016 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 SUPERFAMILY SSF51735 7 193 2.42E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 SUPERFAMILY SSF48179 193 312 3.49E-19 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 SUPERFAMILY SSF52096 474 787 2.71E-37 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Gene3D G3DSA:1.10.1040.10 355 437 1.8E-8 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Gene3D G3DSA:1.10.1040.10 196 294 4.7E-12 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Gene3D G3DSA:3.40.50.720 6 195 6.8E-40 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 SUPERFAMILY SSF48179 345 458 6.29E-17 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 619 8.1E-16 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 10 192 7.5E-41 T 11-11-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 195 293 1.3E-9 T 11-11-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726 ATY42_RS12575 f615c8f3dae9ff0a330c2749df39736c 790 Gene3D G3DSA:3.90.226.10 483 621 2.7E-23 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS04145 47ecabe2794f42373aa1d90bf4462c5c 191 Pfam PF04973 Nicotinamide mononucleotide transporter 2 180 3.0E-48 T 11-11-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ATY42_RS04145 47ecabe2794f42373aa1d90bf4462c5c 191 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 2 183 2.2E-23 T 11-11-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 ATY42_RS07730 34a35cec2b0290482413c5ac36c157e9 477 Pfam PF05593 RHS Repeat 34 71 5.8E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07730 34a35cec2b0290482413c5ac36c157e9 477 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 245 325 8.8E-18 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.2E-96 T 11-11-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 SUPERFAMILY SSF54849 137 203 2.52E-24 T 11-11-2016 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 Gene3D G3DSA:1.10.560.10 3 188 7.4E-49 T 11-11-2016 IPR027413 GroEL-like equatorial domain ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-11-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.638 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 4.0E-254 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 SUPERFAMILY SSF48592 406 521 8.4E-79 T 11-11-2016 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 SUPERFAMILY SSF48592 7 134 8.4E-79 T 11-11-2016 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 Gene3D G3DSA:1.10.560.10 368 518 6.0E-41 T 11-11-2016 IPR027413 GroEL-like equatorial domain ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 11-11-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020 ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 SUPERFAMILY SSF52029 184 376 4.36E-82 T 11-11-2016 IPR027409 GroEL-like apical domain ATY42_RS21530 d5768680e07a1e89e252aa3558405031 546 Gene3D G3DSA:3.50.7.10 189 367 1.6E-98 T 11-11-2016 IPR027409 GroEL-like apical domain ATY42_RS10085 8941cc691611f4f440e2e43bbfccab26 379 SUPERFAMILY SSF82282 28 56 3.01E-100 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS10085 8941cc691611f4f440e2e43bbfccab26 379 SUPERFAMILY SSF82282 89 375 3.01E-100 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS10085 8941cc691611f4f440e2e43bbfccab26 379 Gene3D G3DSA:3.20.20.330 26 56 1.4E-117 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS10085 8941cc691611f4f440e2e43bbfccab26 379 Gene3D G3DSA:3.20.20.330 89 376 1.4E-117 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS10085 8941cc691611f4f440e2e43bbfccab26 379 Pfam PF02574 Homocysteine S-methyltransferase 37 363 3.7E-94 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS11805 e5d1414dd3a070e523f0e5bdcb0f4f2e 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 297 2.2E-45 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS11805 e5d1414dd3a070e523f0e5bdcb0f4f2e 371 SUPERFAMILY SSF111369 78 301 2.22E-25 T 11-11-2016 ATY42_RS11805 e5d1414dd3a070e523f0e5bdcb0f4f2e 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 56 369 6.9E-54 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS11805 e5d1414dd3a070e523f0e5bdcb0f4f2e 371 Gene3D G3DSA:2.40.50.100 190 217 2.6E-9 T 11-11-2016 ATY42_RS11805 e5d1414dd3a070e523f0e5bdcb0f4f2e 371 Gene3D G3DSA:2.40.50.100 82 114 2.6E-9 T 11-11-2016 ATY42_RS22875 13c8d01e8fcd3800bfad12092a5ce50e 145 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 46 126 7.3E-9 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS22875 13c8d01e8fcd3800bfad12092a5ce50e 145 Gene3D G3DSA:3.90.1590.10 25 131 2.6E-18 T 11-11-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 ATY42_RS22875 13c8d01e8fcd3800bfad12092a5ce50e 145 SUPERFAMILY SSF51316 19 139 5.13E-31 T 11-11-2016 IPR011057 Mss4-like ATY42_RS16520 23dd5874b505aedf4f152b12e3f9ed17 178 Pfam PF00877 NlpC/P60 family 70 173 6.3E-26 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain ATY42_RS16520 23dd5874b505aedf4f152b12e3f9ed17 178 Gene3D G3DSA:3.90.1720.10 51 177 5.6E-42 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain ATY42_RS16520 23dd5874b505aedf4f152b12e3f9ed17 178 SUPERFAMILY SSF54001 47 177 8.5E-38 T 11-11-2016 ATY42_RS13085 49640ee04415d9bb1e7ab48a65695c37 153 Gene3D G3DSA:1.10.760.10 66 141 3.0E-26 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS13085 49640ee04415d9bb1e7ab48a65695c37 153 Pfam PF00034 Cytochrome c 68 142 2.8E-7 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS13085 49640ee04415d9bb1e7ab48a65695c37 153 SUPERFAMILY SSF46626 74 142 1.25E-19 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS01970 6a39fbc667bd583f022e9e9d52397355 306 Gene3D G3DSA:3.30.70.1070 164 230 9.0E-5 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS01970 6a39fbc667bd583f022e9e9d52397355 306 Pfam PF05036 Sporulation related domain 163 229 6.3E-7 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS01970 6a39fbc667bd583f022e9e9d52397355 306 Pfam PF05036 Sporulation related domain 197 266 7.4E-8 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS01970 6a39fbc667bd583f022e9e9d52397355 306 SUPERFAMILY SSF110997 163 230 7.59E-5 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS16980 c738bf811c70abbe2dc0998e58282eae 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS16980 c738bf811c70abbe2dc0998e58282eae 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16980 c738bf811c70abbe2dc0998e58282eae 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01260 545839f48f09c3d555ff060d4b373e65 92 Gene3D G3DSA:3.10.450.50 1 91 4.7E-24 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS01260 545839f48f09c3d555ff060d4b373e65 92 SUPERFAMILY SSF54427 1 91 2.6E-24 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS12725 2872dd47e536647a7ef6dd99a530e870 103 Pfam PF04316 Anti-sigma-28 factor, FlgM 42 96 6.2E-14 T 11-11-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal ATY42_RS12725 2872dd47e536647a7ef6dd99a530e870 103 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 4 97 1.6E-18 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 ATY42_RS12725 2872dd47e536647a7ef6dd99a530e870 103 SUPERFAMILY SSF101498 4 97 1.24E-13 T 11-11-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 ATY42_RS11445 d7fd0b5a4cd32b4afcfe95f2bd494d78 131 PIRSF PIRSF000178 1 125 2.8E-35 T 11-11-2016 ATY42_RS11445 d7fd0b5a4cd32b4afcfe95f2bd494d78 131 Gene3D G3DSA:1.20.1300.10 4 124 4.9E-35 T 11-11-2016 ATY42_RS11445 d7fd0b5a4cd32b4afcfe95f2bd494d78 131 SUPERFAMILY SSF81343 4 124 2.01E-29 T 11-11-2016 ATY42_RS11445 d7fd0b5a4cd32b4afcfe95f2bd494d78 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 118 1.7E-21 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11445 d7fd0b5a4cd32b4afcfe95f2bd494d78 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 122 6.5E-34 T 11-11-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 71 156 2.5E-36 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 SUPERFAMILY SSF54364 2 66 3.66E-26 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 Gene3D G3DSA:3.30.110.10 67 158 1.9E-38 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 ProSitePatterns PS00938 Initiation factor 3 signature. 46 59 - T 11-11-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 SUPERFAMILY SSF55200 71 158 3.27E-31 T 11-11-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 158 28.157 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 158 3.4E-62 T 11-11-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 Gene3D G3DSA:3.10.20.80 2 66 3.9E-31 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS16010 8416e5e4af2d50c0fc48743252da1e9a 159 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 64 5.1E-27 T 11-11-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 171 1.9E-17 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 Gene3D G3DSA:2.170.130.10 36 172 1.8E-27 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 Gene3D G3DSA:2.40.170.20 173 269 2.0E-54 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 Gene3D G3DSA:2.40.170.20 305 814 2.0E-54 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 SUPERFAMILY SSF56935 36 534 1.1E-87 T 11-11-2016 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 SUPERFAMILY SSF56935 563 814 1.1E-87 T 11-11-2016 ATY42_RS05310 9a71f7b28bfc31c841c54428c25f358d 814 Pfam PF00593 TonB dependent receptor 573 812 4.7E-19 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 Pfam PF00425 chorismate binding enzyme 187 440 3.6E-92 T 11-11-2016 IPR015890 Chorismate-utilising enzyme, C-terminal ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 Gene3D G3DSA:3.60.120.10 19 449 3.8E-133 T 11-11-2016 IPR005801 ADC synthase GO:0009058 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 96 443 3.3E-142 T 11-11-2016 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 143 3.9E-5 T 11-11-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 PRINTS PR00095 Anthranilate synthase component I signature 382 396 3.1E-18 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 PRINTS PR00095 Anthranilate synthase component I signature 288 301 3.1E-18 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 PRINTS PR00095 Anthranilate synthase component I signature 397 411 3.1E-18 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 PRINTS PR00095 Anthranilate synthase component I signature 302 315 3.1E-18 T 11-11-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS04265 240ecdf52f3e94549bf382b5f768880c 451 SUPERFAMILY SSF56322 7 449 1.31E-123 T 11-11-2016 IPR005801 ADC synthase GO:0009058 ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 PIRSF PIRSF002599 1 69 2.6E-21 T 11-11-2016 IPR012156 Cold shock, CspA GO:0003676 ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 5.4E-28 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 SUPERFAMILY SSF50249 2 68 8.14E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 Gene3D G3DSA:2.40.50.140 5 67 1.8E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 SMART SM00357 6 69 3.3E-27 T 11-11-2016 IPR011129 Cold shock protein GO:0003676 ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-11-2016 IPR019844 Cold-shock conserved site ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 PRINTS PR00050 Cold shock protein signature 7 22 8.9E-16 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 PRINTS PR00050 Cold shock protein signature 42 60 8.9E-16 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS13470 068b985dbb38d64f9190adc3907d93f0 69 PRINTS PR00050 Cold shock protein signature 27 36 8.9E-16 T 11-11-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ATY42_RS14880 e09f8b8d74be214805c122d8946f49c9 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 323 3.5E-134 T 11-11-2016 IPR019949 Luciferase family oxidoreductase, group 1 ATY42_RS14880 e09f8b8d74be214805c122d8946f49c9 333 Gene3D G3DSA:3.20.20.30 3 322 1.0E-87 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATY42_RS14880 e09f8b8d74be214805c122d8946f49c9 333 SUPERFAMILY SSF51679 4 322 6.54E-82 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATY42_RS14880 e09f8b8d74be214805c122d8946f49c9 333 Pfam PF00296 Luciferase-like monooxygenase 17 295 3.5E-35 T 11-11-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ATY42_RS04465 1487d110e5d2292c196f5597623969ef 438 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 219 2.1E-64 T 11-11-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 ATY42_RS04465 1487d110e5d2292c196f5597623969ef 438 SUPERFAMILY SSF53756 58 410 4.71E-20 T 11-11-2016 ATY42_RS04465 1487d110e5d2292c196f5597623969ef 438 Gene3D G3DSA:3.40.50.2000 294 405 5.7E-5 T 11-11-2016 ATY42_RS14765 442b45c1f75b17f0f386b6920891329e 204 Pfam PF09335 SNARE associated Golgi protein 55 163 6.0E-8 T 11-11-2016 IPR032816 SNARE associated Golgi protein ATY42_RS11170 6dda4023ba1786bab66c265353f27ff9 98 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 2 84 6.0E-42 T 11-11-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 ATY42_RS11170 6dda4023ba1786bab66c265353f27ff9 98 Gene3D G3DSA:2.40.50.140 1 84 1.3E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS11170 6dda4023ba1786bab66c265353f27ff9 98 Pfam PF02303 Helix-destabilising protein 1 82 6.8E-29 T 11-11-2016 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 ATY42_RS11170 6dda4023ba1786bab66c265353f27ff9 98 SUPERFAMILY SSF50249 1 85 8.05E-24 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18695 269d3992ebae4950d870b5c981ae5a14 144 Gene3D G3DSA:3.30.420.10 3 125 2.8E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS18695 269d3992ebae4950d870b5c981ae5a14 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS18695 269d3992ebae4950d870b5c981ae5a14 144 SUPERFAMILY SSF53098 3 131 6.83E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 SUPERFAMILY SSF52343 138 254 1.07E-26 T 11-11-2016 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 282 335 1.2E-5 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 Gene3D G3DSA:2.40.30.10 33 135 2.2E-15 T 11-11-2016 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 Gene3D G3DSA:3.10.20.30 261 357 1.1E-19 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 Gene3D G3DSA:3.40.50.80 141 260 2.2E-25 T 11-11-2016 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 Pfam PF00175 Oxidoreductase NAD-binding domain 148 248 4.2E-12 T 11-11-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 SUPERFAMILY SSF54292 257 357 4.59E-19 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 Pfam PF00970 Oxidoreductase FAD-binding domain 46 136 1.9E-10 T 11-11-2016 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 SUPERFAMILY SSF63380 34 139 1.43E-17 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 PRINTS PR00406 Cytochrome B5 reductase signature 69 80 9.8E-8 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 PRINTS PR00406 Cytochrome B5 reductase signature 147 166 9.8E-8 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 PRINTS PR00406 Cytochrome B5 reductase signature 234 242 9.8E-8 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATY42_RS22335 85157c94626984362217b0ebad5127fe 358 PRINTS PR00406 Cytochrome B5 reductase signature 90 97 9.8E-8 T 11-11-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PRINTS PR00996 Glutamate methyltransferase family signature 80 92 1.3E-38 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PRINTS PR00996 Glutamate methyltransferase family signature 41 54 1.3E-38 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PRINTS PR00996 Glutamate methyltransferase family signature 115 135 1.3E-38 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PRINTS PR00996 Glutamate methyltransferase family signature 221 235 1.3E-38 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PRINTS PR00996 Glutamate methyltransferase family signature 240 263 1.3E-38 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PRINTS PR00996 Glutamate methyltransferase family signature 149 165 1.3E-38 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 Pfam PF03705 CheR methyltransferase, all-alpha domain 21 70 3.5E-18 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 SUPERFAMILY SSF47757 11 86 9.02E-24 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 SUPERFAMILY SSF53335 87 278 6.14E-48 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 Gene3D G3DSA:1.10.155.10 12 85 1.2E-31 T 11-11-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 SMART SM00138 19 281 2.7E-86 T 11-11-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 Gene3D G3DSA:3.40.50.150 86 278 1.2E-60 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 PIRSF PIRSF000410 1 282 7.4E-89 T 11-11-2016 IPR026024 Chemotaxis protein methyltransferase CheR ATY42_RS14265 2bf31d799eed71806ae86471662c46c5 288 Pfam PF01739 CheR methyltransferase, SAM binding domain 87 271 1.5E-48 T 11-11-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ATY42_RS03720 5f3568f332d244101868895ba70760ee 329 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 323 1.2E-35 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS03720 5f3568f332d244101868895ba70760ee 329 Gene3D G3DSA:3.90.850.10 69 308 1.2E-35 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS03720 5f3568f332d244101868895ba70760ee 329 SUPERFAMILY SSF56529 77 323 2.88E-53 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 Pfam PF00005 ABC transporter 23 191 1.4E-28 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 Pfam PF00005 ABC transporter 340 473 2.1E-23 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 SMART SM00382 348 526 1.5E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 SMART SM00382 31 236 3.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 552 4.3E-286 T 11-11-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 SUPERFAMILY SSF52540 303 522 4.18E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 Pfam PF12848 ABC transporter 230 306 2.4E-11 T 11-11-2016 IPR032781 ABC-transporter extension domain ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 Gene3D G3DSA:3.40.50.300 8 276 7.1E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 Gene3D G3DSA:3.40.50.300 321 535 1.3E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19455 c5e32b8eb21a8ea0c6a6a80d877aa544 553 SUPERFAMILY SSF52540 9 237 1.29E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04695 5f888b3c11669c762fce078271342063 172 Gene3D G3DSA:1.20.1550.10 7 169 2.7E-50 T 11-11-2016 IPR023380 Disulphide bond formation protein DsbB-like domain ATY42_RS04695 5f888b3c11669c762fce078271342063 172 Pfam PF02600 Disulfide bond formation protein DsbB 9 159 2.9E-41 T 11-11-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 ATY42_RS04695 5f888b3c11669c762fce078271342063 172 SUPERFAMILY SSF158442 12 159 2.88E-41 T 11-11-2016 ATY42_RS04695 5f888b3c11669c762fce078271342063 172 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 4 168 22.614 T 11-11-2016 IPR022920 Disulphide bond formation protein DsbB ATY42_RS02850 c0539549ffddba77df54592b90cbeec1 173 SUPERFAMILY SSF55729 9 164 2.66E-32 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS02850 c0539549ffddba77df54592b90cbeec1 173 Gene3D G3DSA:3.40.630.30 9 165 4.2E-37 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS02850 c0539549ffddba77df54592b90cbeec1 173 Pfam PF13420 Acetyltransferase (GNAT) domain 54 156 2.2E-17 T 11-11-2016 ATY42_RS01030 8e83c3a1cc83bc2c10bc09115827c27d 253 Gene3D G3DSA:3.40.50.1820 1 251 6.0E-45 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01030 8e83c3a1cc83bc2c10bc09115827c27d 253 SUPERFAMILY SSF53474 2 249 4.12E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS01030 8e83c3a1cc83bc2c10bc09115827c27d 253 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 8 249 1.6E-88 T 11-11-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 ATY42_RS01030 8e83c3a1cc83bc2c10bc09115827c27d 253 Pfam PF12697 Alpha/beta hydrolase family 12 244 4.2E-20 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS01030 8e83c3a1cc83bc2c10bc09115827c27d 253 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 1 250 41.762 T 11-11-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 136 1.9E-49 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 Gene3D G3DSA:2.40.100.10 5 134 2.1E-60 T 11-11-2016 IPR029000 Cyclophilin-like domain ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 126 3.2E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 83 98 3.2E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 110 3.2E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.2E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.2E-35 T 11-11-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 PIRSF PIRSF001467 2 156 1.0E-55 T 11-11-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 11-11-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ATY42_RS04660 385bb0c4c3dfb7015106d978bc4ba899 164 SUPERFAMILY SSF50891 4 136 1.26E-57 T 11-11-2016 IPR029000 Cyclophilin-like domain ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 SMART SM00862 151 227 5.7E-21 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 SMART SM00448 1 110 1.3E-27 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 Gene3D G3DSA:1.10.10.10 130 230 6.4E-26 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 227 2.7E-20 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 Pfam PF00072 Response regulator receiver domain 1 111 2.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 SUPERFAMILY SSF52172 1 118 2.56E-33 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 SUPERFAMILY SSF46894 128 228 1.93E-21 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS15185 ed3e2252fd3c1c0a981e2f1bc9700a9e 235 Gene3D G3DSA:3.40.50.2300 1 120 9.1E-34 T 11-11-2016 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.2E-34 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 SMART SM00411 1 90 7.2E-45 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-38 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 SUPERFAMILY SSF47729 1 90 5.0E-33 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-19 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS04960 44b3778ddf4e3c03e66c3cf5529d3e49 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ATY42_RS21740 357642babcb4f8513a7040945a965221 292 Pfam PF05368 NmrA-like family 8 227 5.5E-17 T 11-11-2016 IPR008030 NmrA-like domain Reactome: R-HSA-70635 ATY42_RS21740 357642babcb4f8513a7040945a965221 292 Gene3D G3DSA:3.40.50.720 5 224 6.8E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21740 357642babcb4f8513a7040945a965221 292 SUPERFAMILY SSF51735 7 256 8.18E-54 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS13405 e3be7b7c3bc5fc0749e5a8862d9766d2 254 SUPERFAMILY SSF75217 7 167 9.16E-36 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS13405 e3be7b7c3bc5fc0749e5a8862d9766d2 254 Pfam PF00588 SpoU rRNA Methylase family 7 157 1.6E-35 T 11-11-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ATY42_RS13405 e3be7b7c3bc5fc0749e5a8862d9766d2 254 PIRSF PIRSF004808 2 251 7.1E-70 T 11-11-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ATY42_RS13405 e3be7b7c3bc5fc0749e5a8862d9766d2 254 Gene3D G3DSA:3.40.1280.10 7 162 2.6E-34 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS13405 e3be7b7c3bc5fc0749e5a8862d9766d2 254 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 5 243 4.8E-65 T 11-11-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 ATY42_RS07910 452a4244f63cb5515d069e01c3f998e8 443 SUPERFAMILY SSF56219 177 440 3.17E-20 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS07910 452a4244f63cb5515d069e01c3f998e8 443 SUPERFAMILY SSF56219 72 144 3.17E-20 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS07910 452a4244f63cb5515d069e01c3f998e8 443 Gene3D G3DSA:3.60.10.10 181 216 7.6E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS07910 452a4244f63cb5515d069e01c3f998e8 443 Gene3D G3DSA:3.60.10.10 66 134 7.6E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS07910 452a4244f63cb5515d069e01c3f998e8 443 Gene3D G3DSA:3.60.10.10 276 334 7.6E-6 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS07910 452a4244f63cb5515d069e01c3f998e8 443 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 76 433 1.0E-36 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS16470 926cd341a3f583a6f7d99a452a0dc6bf 283 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 264 3.2E-101 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein ATY42_RS16470 926cd341a3f583a6f7d99a452a0dc6bf 283 Gene3D G3DSA:3.40.50.300 19 262 5.6E-103 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16470 926cd341a3f583a6f7d99a452a0dc6bf 283 ProSitePatterns PS01215 Mrp family signature. 128 144 - T 11-11-2016 IPR000808 Mrp, conserved site GO:0005524 ATY42_RS16470 926cd341a3f583a6f7d99a452a0dc6bf 283 SUPERFAMILY SSF52540 24 269 1.49E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16470 926cd341a3f583a6f7d99a452a0dc6bf 283 Hamap MF_02040 Iron-sulfur cluster carrier protein. 10 269 37.71 T 11-11-2016 IPR019591 Mrp/NBP35 ATP-binding protein ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 SMART SM00642 581 906 1.3E-4 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Gene3D G3DSA:3.20.20.80 547 931 6.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Gene3D G3DSA:3.20.20.80 441 491 6.5E-73 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Gene3D G3DSA:3.20.20.80 56 242 6.4E-15 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Pfam PF00128 Alpha amylase, catalytic domain 595 709 3.6E-5 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 SUPERFAMILY SSF51445 546 934 3.62E-85 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Pfam PF11896 Domain of unknown function (DUF3416) 388 571 3.7E-49 T 11-11-2016 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 385 1034 46.622 T 11-11-2016 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16 ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 SUPERFAMILY SSF51445 57 241 1.1E-22 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00860 1b0bec5a08f54e9b439a608a13d8db3c 1038 Gene3D G3DSA:2.60.40.1180 940 1024 5.5E-5 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.58 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.6E-57 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.7E-39 T 11-11-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 Gene3D G3DSA:3.90.1170.10 24 134 2.1E-52 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 2.9E-48 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-11-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18010 0c14d1c3da4c1760e9edb9587ff534e5 137 SUPERFAMILY SSF54686 1 134 4.19E-54 T 11-11-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ATY42_RS08745 61e010f18f19c1918392452701492c30 459 Gene3D G3DSA:3.40.710.10 87 419 1.3E-73 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS08745 61e010f18f19c1918392452701492c30 459 Pfam PF00144 Beta-lactamase 80 405 4.1E-65 T 11-11-2016 IPR001466 Beta-lactamase-related ATY42_RS08745 61e010f18f19c1918392452701492c30 459 SUPERFAMILY SSF56601 74 412 4.46E-75 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 SUPERFAMILY SSF56931 112 377 1.29E-90 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 346 366 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 185 201 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 208 227 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 238 252 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 324 341 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 253 271 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 163 180 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 PRINTS PR01486 Bacterial phospholipase A1 protein signature 288 306 3.6E-35 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 Gene3D G3DSA:2.40.230.10 110 376 4.6E-98 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS11580 559ba17d659376f8466ade86c5dc6ecf 377 Pfam PF02253 Phospholipase A1 111 373 1.6E-104 T 11-11-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 ATY42_RS07105 7e2461acaf9c0d1651752efc9d028b25 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS07105 7e2461acaf9c0d1651752efc9d028b25 332 SMART SM01126 148 293 7.8E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS07105 7e2461acaf9c0d1651752efc9d028b25 332 Pfam PF12762 ISXO2-like transposase domain 148 293 1.4E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS15605 0d9e6778b613ea625bcc63a40883eb57 90 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 75 5.1E-22 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS08680 0e0bd3c9adcae11500ed5938cbbaf08a 338 SUPERFAMILY SSF53067 18 335 2.29E-49 T 11-11-2016 ATY42_RS08680 0e0bd3c9adcae11500ed5938cbbaf08a 338 Pfam PF02685 Glucokinase 20 333 1.4E-99 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS08680 0e0bd3c9adcae11500ed5938cbbaf08a 338 Gene3D G3DSA:3.40.367.20 120 319 4.0E-63 T 11-11-2016 ATY42_RS16085 226d76eb286dbd756f490792b4be0692 171 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS16085 226d76eb286dbd756f490792b4be0692 171 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 5.1E-9 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS16085 226d76eb286dbd756f490792b4be0692 171 Pfam PF12019 Type II transport protein GspH 45 161 6.2E-12 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ATY42_RS16085 226d76eb286dbd756f490792b4be0692 171 Gene3D G3DSA:3.30.700.10 9 47 5.1E-6 T 11-11-2016 ATY42_RS16085 226d76eb286dbd756f490792b4be0692 171 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 6.8E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS16085 226d76eb286dbd756f490792b4be0692 171 SUPERFAMILY SSF54523 9 146 7.85E-21 T 11-11-2016 ATY42_RS02270 aa81ff76c35b6483eeeb1b0039bc15e7 180 Pfam PF00775 Dioxygenase 31 137 1.0E-11 T 11-11-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATY42_RS02270 aa81ff76c35b6483eeeb1b0039bc15e7 180 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 6 180 1.8E-63 T 11-11-2016 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 ATY42_RS02270 aa81ff76c35b6483eeeb1b0039bc15e7 180 SUPERFAMILY SSF49482 2 179 2.35E-46 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATY42_RS02270 aa81ff76c35b6483eeeb1b0039bc15e7 180 Gene3D G3DSA:2.60.130.10 3 178 1.6E-51 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 Gene3D G3DSA:2.40.50.140 11 86 4.2E-33 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.6E-34 T 11-11-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 9.0E-36 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 86 24.095 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 SUPERFAMILY SSF50249 11 86 4.2E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 5.4E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 5.4E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 5.4E-11 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18000 bdc6ff9c112b137ea417084d4c0ce2e4 89 Pfam PF00366 Ribosomal protein S17 15 82 7.8E-32 T 11-11-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS08855 98e25e2c78cd3f1c749fb6888ca9868f 187 Pfam PF01292 Prokaryotic cytochrome b561 8 179 5.6E-32 T 11-11-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 ATY42_RS08855 98e25e2c78cd3f1c749fb6888ca9868f 187 SUPERFAMILY SSF81342 5 182 1.26E-37 T 11-11-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ATY42_RS20450 2cf6eb3c5a316ab5657d2b887d7cea82 514 Pfam PF00361 Proton-conducting membrane transporter 129 411 1.8E-31 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS20450 2cf6eb3c5a316ab5657d2b887d7cea82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.4E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS20450 2cf6eb3c5a316ab5657d2b887d7cea82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 2.4E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS20450 2cf6eb3c5a316ab5657d2b887d7cea82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.4E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS20450 2cf6eb3c5a316ab5657d2b887d7cea82 514 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 236 260 2.4E-6 T 11-11-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16610 8fb96e6ab0d89de3e737ab15938be9e1 190 Gene3D G3DSA:3.90.950.10 2 188 8.6E-63 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ATY42_RS16610 8fb96e6ab0d89de3e737ab15938be9e1 190 PIRSF PIRSF006305 1 190 7.1E-47 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS16610 8fb96e6ab0d89de3e737ab15938be9e1 190 Pfam PF02545 Maf-like protein 2 186 1.2E-51 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS16610 8fb96e6ab0d89de3e737ab15938be9e1 190 SUPERFAMILY SSF52972 1 185 3.07E-57 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ATY42_RS16610 8fb96e6ab0d89de3e737ab15938be9e1 190 Hamap MF_00528 Septum formation protein Maf [maf]. 1 190 28.864 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS16610 8fb96e6ab0d89de3e737ab15938be9e1 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.9E-46 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 SMART SM00100 18 137 6.5E-22 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 SMART SM00419 180 228 2.5E-12 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 186 202 2.5E-6 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 202 217 2.5E-6 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 Gene3D G3DSA:2.60.120.10 21 163 2.4E-29 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 SUPERFAMILY SSF46785 159 227 1.14E-12 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 Pfam PF00325 Bacterial regulatory proteins, crp family 186 217 8.2E-14 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 Pfam PF00027 Cyclic nucleotide-binding domain 36 124 3.6E-19 T 11-11-2016 IPR000595 Cyclic nucleotide-binding domain ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 ProSitePatterns PS00042 Crp-type HTH domain signature. 188 211 - T 11-11-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 Gene3D G3DSA:1.10.10.10 164 227 6.0E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20945 a40fcacb503f7d790a6df549d6a26f5a 230 SUPERFAMILY SSF51206 24 155 2.23E-24 T 11-11-2016 IPR018490 Cyclic nucleotide-binding-like ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 PIRSF PIRSF003128 1 554 2.9E-143 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 SUPERFAMILY SSF52540 286 330 1.86E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 SUPERFAMILY SSF52540 1 198 1.86E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 SUPERFAMILY SSF52540 359 507 1.86E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 6.4E-144 T 11-11-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 Gene3D G3DSA:3.40.50.300 419 496 2.5E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 Gene3D G3DSA:3.40.50.300 1 203 1.8E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09840 2f7b948b67a8deea3e7e4c6eba7b3c9d 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 1.6E-19 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal ATY42_RS02295 dad9c5fe7abbb9cdf7b55028473f33a8 279 Gene3D G3DSA:3.40.50.1820 8 277 1.5E-35 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02295 dad9c5fe7abbb9cdf7b55028473f33a8 279 Pfam PF12146 Serine aminopeptidase, S33 21 258 7.3E-26 T 11-11-2016 IPR022742 Serine aminopeptidase, S33 ATY42_RS02295 dad9c5fe7abbb9cdf7b55028473f33a8 279 SUPERFAMILY SSF53474 4 277 4.09E-36 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF47226 736 847 5.23E-24 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF50341 2030 2160 6.93E-23 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF52172 2186 2305 7.54E-34 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:2.30.30.40 2030 2052 1.9E-20 T 11-11-2016 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:2.30.30.40 2116 2160 1.9E-20 T 11-11-2016 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF00072 Response regulator receiver domain 2186 2296 4.8E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SMART SM00073 1540 1638 7.1E-16 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SMART SM00073 737 834 1.8E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SMART SM00387 1890 2031 3.4E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF47226 294 412 1.18E-7 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF01584 CheW-like domain 2035 2163 1.9E-19 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1894 2030 5.8E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1935 1949 1.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1991 2009 1.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 PRINTS PR00344 Bacterial sensor protein C-terminal signature 2015 2028 1.3E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF47226 13 133 3.01E-18 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SMART SM00260 2023 2161 8.7E-22 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:3.30.565.10 1847 2028 1.9E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF47226 1541 1658 1.44E-23 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:1.10.287.560 1821 1846 3.6E-7 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:1.10.287.560 1709 1742 3.6E-7 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:1.20.120.160 734 873 3.4E-26 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:1.20.120.160 1540 1671 1.7E-26 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:1.20.120.160 18 143 5.7E-13 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:1.20.120.160 897 1026 5.9E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF01627 Hpt domain 13 111 8.0E-7 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF01627 Hpt domain 740 828 1.9E-12 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF01627 Hpt domain 1543 1636 8.1E-15 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF01627 Hpt domain 900 996 2.9E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SMART SM01231 1707 1845 1.6E-11 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SMART SM00448 2184 2297 1.7E-33 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF47226 897 1018 3.66E-14 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Gene3D G3DSA:3.40.50.2300 2184 2302 1.5E-35 T 11-11-2016 ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 SUPERFAMILY SSF55874 1847 2028 9.43E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS08480 59617074145867334e2bfca7f21eecd9 2308 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1709 1844 2.2E-5 T 11-11-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ATY42_RS14850 518d72182a1653968359b60f68b6fb65 253 Pfam PF02698 DUF218 domain 68 231 1.0E-26 T 11-11-2016 IPR003848 Domain of unknown function DUF218 ATY42_RS14850 518d72182a1653968359b60f68b6fb65 253 Gene3D G3DSA:3.40.50.620 67 203 1.2E-21 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS06635 36aeb62b4454e001e0da3440b96aa062 348 Gene3D G3DSA:3.40.50.10210 72 328 2.6E-99 T 11-11-2016 ATY42_RS06635 36aeb62b4454e001e0da3440b96aa062 348 Pfam PF02277 Phosphoribosyltransferase 13 345 1.2E-126 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06635 36aeb62b4454e001e0da3440b96aa062 348 Gene3D G3DSA:1.10.1610.10 5 71 4.5E-31 T 11-11-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06635 36aeb62b4454e001e0da3440b96aa062 348 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 12 347 36.484 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06635 36aeb62b4454e001e0da3440b96aa062 348 SUPERFAMILY SSF52733 5 346 4.97E-113 T 11-11-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06635 36aeb62b4454e001e0da3440b96aa062 348 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 14 345 7.6E-133 T 11-11-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS04790 cd6797b51f5fb02161568cfa5d1fde0d 324 Gene3D G3DSA:3.30.420.10 171 313 9.1E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04790 cd6797b51f5fb02161568cfa5d1fde0d 324 Pfam PF00665 Integrase core domain 178 273 6.2E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS04790 cd6797b51f5fb02161568cfa5d1fde0d 324 Pfam PF13936 Helix-turn-helix domain 21 51 5.7E-12 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS04790 cd6797b51f5fb02161568cfa5d1fde0d 324 SUPERFAMILY SSF53098 171 314 7.59E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SUPERFAMILY SSF56059 674 939 2.47E-102 T 11-11-2016 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.2E-66 T 11-11-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.287 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SUPERFAMILY SSF52440 1 127 1.73E-49 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 428 548 7.5E-40 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SUPERFAMILY SSF52440 557 676 1.37E-49 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SUPERFAMILY SSF56059 128 401 6.36E-108 T 11-11-2016 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1059 0.0 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SUPERFAMILY SSF48108 396 555 9.15E-51 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.40.50.20 540 663 5.1E-60 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 882 9.4E-38 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.6E-70 T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:1.10.1030.10 400 539 9.1E-50 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 845 852 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-11-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.40.50.1380 945 1078 4.1E-42 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SMART SM01096 425 548 1.9E-71 T 11-11-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.30.1490.20 687 745 9.6E-26 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.30.1490.20 141 200 4.9E-24 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.40.50.20 4 108 6.0E-44 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1074 13.488 T 11-11-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.30.470.20 201 399 2.3E-75 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Gene3D G3DSA:3.30.470.20 746 940 2.8E-77 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 Pfam PF02142 MGS-like domain 963 1048 1.9E-19 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SUPERFAMILY SSF52335 942 1077 1.28E-39 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS14395 8af5a462399585f5cc35a410410a86c4 1080 SMART SM00851 962 1048 1.0E-32 T 11-11-2016 IPR011607 Methylglyoxal synthase-like domain ATY42_RS22745 c495fd6cdc65b0f4746e78b2d92db147 284 Pfam PF13489 Methyltransferase domain 56 204 1.6E-6 T 11-11-2016 ATY42_RS22745 c495fd6cdc65b0f4746e78b2d92db147 284 Gene3D G3DSA:3.40.50.150 57 244 1.6E-13 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22745 c495fd6cdc65b0f4746e78b2d92db147 284 PIRSF PIRSF031679 9 284 1.2E-115 T 11-11-2016 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted ATY42_RS22745 c495fd6cdc65b0f4746e78b2d92db147 284 SUPERFAMILY SSF53335 58 247 1.22E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 Pfam PF02167 Cytochrome C1 family 43 251 2.8E-22 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 PRINTS PR00603 Cytochrome C1 signature 113 137 7.1E-11 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 PRINTS PR00603 Cytochrome C1 signature 51 70 7.1E-11 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 PRINTS PR00603 Cytochrome C1 signature 198 217 7.1E-11 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 PRINTS PR00603 Cytochrome C1 signature 217 232 7.1E-11 T 11-11-2016 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 SUPERFAMILY SSF46626 34 216 3.53E-49 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 Gene3D G3DSA:1.20.5.100 221 252 6.2E-13 T 11-11-2016 ATY42_RS13670 ccd0813b104abe5fe184989cf19a8663 252 Gene3D G3DSA:1.10.760.10 27 217 8.6E-65 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 326 1.3E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 SUPERFAMILY SSF55874 362 476 3.29E-26 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 SUPERFAMILY SSF47384 263 328 4.71E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 1.0E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 1.0E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 1.0E-8 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 Gene3D G3DSA:1.10.287.130 263 328 2.4E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 375 476 7.2E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 SMART SM00387 374 479 8.8E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 Gene3D G3DSA:3.30.565.10 366 477 3.5E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21155 67762b2cb81f0f8755856d1e2d78e7c7 480 SMART SM00388 268 334 1.6E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS20670 33064675b487f2d78b0382be0440794d 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 3.4E-19 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS06925 d982204853552250c12cfe1b7c1ab4a2 113 Pfam PF12977 Domain of Unknown Function with PDB structure (DUF3861) 15 105 1.5E-22 T 11-11-2016 IPR024476 Protein of unknown function DUF3861 ATY42_RS16605 a73e097ae6d596043d2e8fa7e54db104 499 SMART SM00316 37 130 3.3E-4 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS16605 a73e097ae6d596043d2e8fa7e54db104 499 SUPERFAMILY SSF50249 39 136 3.57E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16605 a73e097ae6d596043d2e8fa7e54db104 499 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 436 7.9E-154 T 11-11-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ATY42_RS16605 a73e097ae6d596043d2e8fa7e54db104 499 Pfam PF10150 Ribonuclease E/G family 132 403 4.8E-103 T 11-11-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ATY42_RS16605 a73e097ae6d596043d2e8fa7e54db104 499 Gene3D G3DSA:2.40.50.140 33 136 1.4E-29 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16605 a73e097ae6d596043d2e8fa7e54db104 499 Pfam PF00575 S1 RNA binding domain 38 76 2.3E-4 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS19715 ea8fd9b7c8f68c20150057c8a290f96d 201 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 19 157 4.8E-50 T 11-11-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 ATY42_RS19715 ea8fd9b7c8f68c20150057c8a290f96d 201 Pfam PF13994 PgaD-like protein 21 153 7.0E-26 T 11-11-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 ATY42_RS19715 ea8fd9b7c8f68c20150057c8a290f96d 201 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 94 152 4.0E-4 T 11-11-2016 ATY42_RS05000 3c435ff9a51dc6e08d779aa8053071b3 150 Gene3D G3DSA:3.30.420.10 2 143 1.3E-55 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05000 3c435ff9a51dc6e08d779aa8053071b3 150 SUPERFAMILY SSF53098 2 140 2.4E-54 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05000 3c435ff9a51dc6e08d779aa8053071b3 150 Pfam PF00075 RNase H 2 140 2.8E-46 T 11-11-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ATY42_RS05000 3c435ff9a51dc6e08d779aa8053071b3 150 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 36.584 T 11-11-2016 IPR022892 Ribonuclease H GO:0004523 ATY42_RS22610 042108a577010b8e983db8b8bc06624d 158 Gene3D G3DSA:3.40.50.1240 1 158 1.6E-47 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS22610 042108a577010b8e983db8b8bc06624d 158 SUPERFAMILY SSF53254 1 140 7.9E-27 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS22610 042108a577010b8e983db8b8bc06624d 158 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 98 7.4E-14 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS22610 042108a577010b8e983db8b8bc06624d 158 SMART SM00855 3 114 1.4E-6 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS19575 4a5ffd41873e9af1cd15d22a7a834983 255 Gene3D G3DSA:3.60.10.10 9 247 1.6E-8 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS19575 4a5ffd41873e9af1cd15d22a7a834983 255 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 12 240 1.2E-18 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS19575 4a5ffd41873e9af1cd15d22a7a834983 255 SUPERFAMILY SSF56219 7 251 2.09E-31 T 11-11-2016 IPR005135 Endonuclease/exonuclease/phosphatase ATY42_RS05090 f5fbb0051548223040b2f5bb23f21134 349 Gene3D G3DSA:3.40.50.2000 10 151 2.3E-22 T 11-11-2016 ATY42_RS05090 f5fbb0051548223040b2f5bb23f21134 349 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 299 4.2E-44 T 11-11-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 ATY42_RS05090 f5fbb0051548223040b2f5bb23f21134 349 SUPERFAMILY SSF53756 8 345 5.76E-77 T 11-11-2016 ATY42_RS05090 f5fbb0051548223040b2f5bb23f21134 349 Gene3D G3DSA:3.40.50.2000 161 343 8.5E-44 T 11-11-2016 ATY42_RS15850 eb973bb71e4c87d9ba8465ce8d7ee06b 307 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 41 269 1.5E-39 T 11-11-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system ATY42_RS07655 64acd17d8f061b1fad07611615eebca9 421 Pfam PF00999 Sodium/hydrogen exchanger family 17 406 6.4E-55 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 Gene3D G3DSA:3.40.50.720 149 262 4.7E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 Gene3D G3DSA:3.90.180.10 5 148 6.7E-43 T 11-11-2016 IPR011032 GroES-like ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 SMART SM00829 16 323 2.5E-33 T 11-11-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 SUPERFAMILY SSF51735 114 288 1.95E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 SUPERFAMILY SSF50129 12 141 4.41E-35 T 11-11-2016 IPR011032 GroES-like ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 Pfam PF13602 Zinc-binding dehydrogenase 186 323 1.8E-28 T 11-11-2016 ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 6 324 4.4E-129 T 11-11-2016 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 ATY42_RS19170 a5bb039b070512dae95b1c59e9ff4f35 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 90 3.4E-6 T 11-11-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ATY42_RS19425 d61fd49e9d4312d1b04f13dc24e7877c 174 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.0E-58 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ATY42_RS19425 d61fd49e9d4312d1b04f13dc24e7877c 174 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 84.149 T 11-11-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ATY42_RS19425 d61fd49e9d4312d1b04f13dc24e7877c 174 Pfam PF03477 ATP cone domain 50 136 3.6E-14 T 11-11-2016 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ATY42_RS20775 299c639d049000285462e9d8e23cb5ba 148 Gene3D G3DSA:1.10.1510.10 1 90 1.0E-34 T 11-11-2016 ATY42_RS20775 299c639d049000285462e9d8e23cb5ba 148 Pfam PF09424 Yqey-like protein 4 146 3.1E-54 T 11-11-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial ATY42_RS20775 299c639d049000285462e9d8e23cb5ba 148 Gene3D G3DSA:1.10.10.410 91 147 2.8E-21 T 11-11-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ATY42_RS20775 299c639d049000285462e9d8e23cb5ba 148 SUPERFAMILY SSF89095 1 146 2.93E-42 T 11-11-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 ATY42_RS01905 612ca8b9cd6a93d2d382a513567b5f62 191 SUPERFAMILY SSF48403 44 171 6.13E-32 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS01905 612ca8b9cd6a93d2d382a513567b5f62 191 SMART SM00248 140 169 8.5 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS01905 612ca8b9cd6a93d2d382a513567b5f62 191 SMART SM00248 74 103 0.0059 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS01905 612ca8b9cd6a93d2d382a513567b5f62 191 SMART SM00248 107 136 6.5 T 11-11-2016 IPR002110 Ankyrin repeat GO:0005515 ATY42_RS01905 612ca8b9cd6a93d2d382a513567b5f62 191 Pfam PF12796 Ankyrin repeats (3 copies) 48 137 7.6E-12 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS01905 612ca8b9cd6a93d2d382a513567b5f62 191 Gene3D G3DSA:1.25.40.20 49 175 2.0E-32 T 11-11-2016 IPR020683 Ankyrin repeat-containing domain ATY42_RS11385 839c17f778026b5223bf6ed998be8919 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 67 187 7.5E-30 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ATY42_RS21750 751f177b83fbc07f8f39d52edb5204be 318 Pfam PF03812 2-keto-3-deoxygluconate permease 3 308 3.1E-110 T 11-11-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ATY42_RS21750 751f177b83fbc07f8f39d52edb5204be 318 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 25 316 3.0E-100 T 11-11-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ATY42_RS21750 751f177b83fbc07f8f39d52edb5204be 318 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 35.423 T 11-11-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ATY42_RS21750 751f177b83fbc07f8f39d52edb5204be 318 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 309 2.1E-142 T 11-11-2016 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 2.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 2.6E-22 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 247 7.4E-46 T 11-11-2016 ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 SUPERFAMILY SSF51735 12 249 6.2E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 195 0.0068 T 11-11-2016 ATY42_RS12860 35eb2d45b1a0f2c7a30a25aae3c5c5ab 250 Gene3D G3DSA:3.40.50.720 6 249 1.9E-64 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 Gene3D G3DSA:1.20.140.10 223 384 8.0E-40 T 11-11-2016 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 134 146 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 Gene3D G3DSA:1.10.540.10 5 129 4.9E-36 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 381 1.4E-28 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 SUPERFAMILY SSF47203 238 385 1.24E-38 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 132 222 7.5E-22 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 SUPERFAMILY SSF56645 7 233 1.57E-72 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 127 3.8E-30 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS07450 a25f28c2f3565619e2cb9c80e318bdaa 387 Gene3D G3DSA:2.40.110.10 131 222 6.4E-34 T 11-11-2016 ATY42_RS15140 40b94cbbc5c1851746b27bb6b5b5308a 192 SUPERFAMILY SSF46689 6 63 6.48E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15140 40b94cbbc5c1851746b27bb6b5b5308a 192 Gene3D G3DSA:1.10.10.10 7 33 2.9E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15140 40b94cbbc5c1851746b27bb6b5b5308a 192 Gene3D G3DSA:1.10.357.10 34 179 7.2E-11 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS16650 0f9ea54eecc64753aa3f7f85bcaad13d 59 Pfam PF05787 Bacterial protein of unknown function (DUF839) 3 45 2.5E-9 T 11-11-2016 IPR008557 Protein of unknown function DUF839 ATY42_RS21845 8e305823903c2e5790c14b622fde2fe0 428 SUPERFAMILY SSF103473 29 409 1.44E-54 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS21845 8e305823903c2e5790c14b622fde2fe0 428 Pfam PF07690 Major Facilitator Superfamily 36 252 2.5E-21 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS21845 8e305823903c2e5790c14b622fde2fe0 428 ProSitePatterns PS00216 Sugar transport proteins signature 1. 86 102 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS21845 8e305823903c2e5790c14b622fde2fe0 428 Gene3D G3DSA:1.20.1250.20 34 210 9.4E-28 T 11-11-2016 ATY42_RS21845 8e305823903c2e5790c14b622fde2fe0 428 Gene3D G3DSA:1.20.1250.20 232 410 4.0E-15 T 11-11-2016 ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 Pfam PF01476 LysM domain 479 522 1.4E-9 T 11-11-2016 IPR018392 LysM domain ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 SMART SM00257 478 523 2.6E-10 T 11-11-2016 IPR018392 LysM domain ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 Gene3D G3DSA:1.10.530.10 192 346 2.3E-36 T 11-11-2016 ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 SUPERFAMILY SSF54106 477 522 4.19E-7 T 11-11-2016 IPR018392 LysM domain ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 SUPERFAMILY SSF53955 195 341 2.16E-34 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 Gene3D G3DSA:3.10.350.10 477 522 6.1E-12 T 11-11-2016 IPR018392 LysM domain ATY42_RS16415 ce89c4111ef980411a5785d397899c3c 527 Pfam PF01464 Transglycosylase SLT domain 198 305 3.0E-22 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 ATY42_RS02415 533f98b6805babd60f0707cac18fc18e 377 SUPERFAMILY SSF53067 153 350 1.15E-25 T 11-11-2016 ATY42_RS02415 533f98b6805babd60f0707cac18fc18e 377 SUPERFAMILY SSF53067 76 121 1.15E-25 T 11-11-2016 ATY42_RS02415 533f98b6805babd60f0707cac18fc18e 377 SUPERFAMILY SSF53067 11 42 1.15E-25 T 11-11-2016 ATY42_RS02415 533f98b6805babd60f0707cac18fc18e 377 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 377 41.942 T 11-11-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 ATY42_RS02415 533f98b6805babd60f0707cac18fc18e 377 Gene3D G3DSA:3.30.420.40 11 206 2.5E-69 T 11-11-2016 ATY42_RS02415 533f98b6805babd60f0707cac18fc18e 377 Pfam PF03702 Uncharacterised protein family (UPF0075) 11 377 1.7E-151 T 11-11-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 ATY42_RS10075 4e964f99500e31453457c151801fd92c 401 SUPERFAMILY SSF48208 12 398 7.56E-121 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS10075 4e964f99500e31453457c151801fd92c 401 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 39 389 7.6E-125 T 11-11-2016 ATY42_RS10075 4e964f99500e31453457c151801fd92c 401 Gene3D G3DSA:1.50.10.10 10 399 1.2E-133 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 SMART SM00283 493 740 6.8E-90 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 SUPERFAMILY SSF55785 262 380 2.15E-5 T 11-11-2016 IPR000014 PAS domain ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 Pfam PF00672 HAMP domain 194 258 3.4E-13 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 183 1.0E-15 T 11-11-2016 IPR024478 4HB MCP domain ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 545 739 1.8E-61 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 SUPERFAMILY SSF58104 460 741 6.28E-71 T 11-11-2016 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 SUPERFAMILY SSF158472 213 258 4.18E-7 T 11-11-2016 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 Gene3D G3DSA:1.10.287.950 508 712 2.5E-61 T 11-11-2016 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 SMART SM00304 213 265 8.6E-6 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 SMART SM00304 440 492 25.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14260 5a3a80b21ac316d80b00b811139e14af 797 Gene3D G3DSA:3.30.450.20 262 382 5.1E-6 T 11-11-2016 ATY42_RS14195 4170d8a32b3b30c56b9745ddaa368848 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS14195 4170d8a32b3b30c56b9745ddaa368848 338 Pfam PF12762 ISXO2-like transposase domain 154 299 7.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS14195 4170d8a32b3b30c56b9745ddaa368848 338 SMART SM01126 154 299 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Gene3D G3DSA:3.90.550.10 4 246 1.9E-64 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 394 428 2.6E-8 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Pfam PF12804 MobA-like NTP transferase domain 7 128 5.7E-23 T 11-11-2016 IPR025877 MobA-like NTP transferase ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 298 6.5E-6 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 348 1.7E-4 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 SUPERFAMILY SSF53448 5 251 8.88E-58 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 SUPERFAMILY SSF51161 255 436 9.61E-48 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Gene3D G3DSA:2.160.10.10 261 436 1.9E-43 T 11-11-2016 ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 4 451 40.763 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 ATY42_RS03550 f134ec74cd036afae0487352db93818c 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 2.0E-186 T 11-11-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 Pfam PF00593 TonB dependent receptor 514 776 2.4E-28 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 Pfam PF07715 TonB-dependent Receptor Plug Domain 64 165 5.2E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 Gene3D G3DSA:2.170.130.10 64 179 3.1E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 Gene3D G3DSA:2.40.170.20 180 777 1.2E-85 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 760 777 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 SUPERFAMILY SSF56935 323 777 5.29E-89 T 11-11-2016 ATY42_RS18555 3e9eff207c352d185bc0f9ef31269934 777 SUPERFAMILY SSF56935 44 286 5.29E-89 T 11-11-2016 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 SUPERFAMILY SSF90123 144 461 1.18E-58 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 Pfam PF03412 Peptidase C39 family 2 129 3.8E-35 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 Pfam PF00005 ABC transporter 489 637 4.6E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 Gene3D G3DSA:3.90.70.10 8 128 1.0E-25 T 11-11-2016 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 SMART SM00382 497 681 9.3E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 Gene3D G3DSA:3.40.50.300 469 690 1.2E-72 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 SUPERFAMILY SSF52540 461 684 1.88E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 ProSitePatterns PS00211 ABC transporters family signature. 609 623 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 Gene3D G3DSA:1.20.1560.10 149 454 2.5E-62 T 11-11-2016 ATY42_RS08640 d6831ae3c63868e1a671be9fdd191bcc 704 Pfam PF00664 ABC transporter transmembrane region 160 423 1.8E-33 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS15125 650752add56bbc5d75998bba8eaeb5ba 493 Pfam PF05598 Transposase domain (DUF772) 75 149 3.5E-14 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21755 b8816561ece8b111587541bbada0d36a 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 330 1.8E-36 T 11-11-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ATY42_RS21755 b8816561ece8b111587541bbada0d36a 342 Gene3D G3DSA:3.20.20.210 2 341 2.1E-87 T 11-11-2016 ATY42_RS21755 b8816561ece8b111587541bbada0d36a 342 SUPERFAMILY SSF51726 4 338 7.46E-65 T 11-11-2016 ATY42_RS21755 b8816561ece8b111587541bbada0d36a 342 PIRSF PIRSF005632 1 342 1.8E-195 T 11-11-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit ATY42_RS06705 6abff8486040abff5ff886c43b34c243 799 SUPERFAMILY SSF56935 36 799 4.76E-100 T 11-11-2016 ATY42_RS06705 6abff8486040abff5ff886c43b34c243 799 Pfam PF00593 TonB dependent receptor 505 798 1.3E-22 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06705 6abff8486040abff5ff886c43b34c243 799 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 171 2.0E-23 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06705 6abff8486040abff5ff886c43b34c243 799 Gene3D G3DSA:2.170.130.10 50 173 3.8E-33 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06705 6abff8486040abff5ff886c43b34c243 799 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 43 - T 11-11-2016 IPR010916 TonB box, conserved site ATY42_RS06705 6abff8486040abff5ff886c43b34c243 799 Gene3D G3DSA:2.40.170.20 174 799 2.5E-80 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS20810 35b805cfbc4a7b15fb7f165efe95a27c 334 PIRSF PIRSF026166 1 334 6.0E-132 T 11-11-2016 IPR016833 Putative sodium bile acid cotransporter ATY42_RS20810 35b805cfbc4a7b15fb7f165efe95a27c 334 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 12 321 6.9E-96 T 11-11-2016 IPR016833 Putative sodium bile acid cotransporter ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 Gene3D G3DSA:3.40.50.7700 3 163 2.6E-72 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 SMART SM01001 8 159 1.9E-97 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 SUPERFAMILY SSF52255 9 165 3.66E-64 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 164 4.2E-63 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 31.771 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 PIRSF PIRSF001338 5 166 1.7E-65 T 11-11-2016 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 ATY42_RS16130 3b47c520da6f9b8c4ce7445ae14d7394 167 Pfam PF00731 AIR carboxylase 10 157 9.7E-62 T 11-11-2016 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 SUPERFAMILY SSF142984 255 338 5.36E-22 T 11-11-2016 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 346 426 9.7E-30 T 11-11-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 SUPERFAMILY SSF142019 19 252 5.23E-78 T 11-11-2016 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 SUPERFAMILY SSF140490 339 437 4.71E-35 T 11-11-2016 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 356 367 - T 11-11-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 429 4.5E-198 T 11-11-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 SMART SM00928 343 388 4.4E-26 T 11-11-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 181 196 - T 11-11-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 Pfam PF10531 SLBB domain 257 305 7.4E-11 T 11-11-2016 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16230 73182109502670b43a85bbc63c0e14e6 444 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 62 233 2.2E-42 T 11-11-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 Pfam PF01627 Hpt domain 165 220 6.1E-5 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 SUPERFAMILY SSF52172 10 130 1.28E-24 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 Gene3D G3DSA:1.20.120.160 145 215 1.4E-7 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 SUPERFAMILY SSF47226 108 218 1.7E-9 T 11-11-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 Pfam PF00072 Response regulator receiver domain 14 123 1.6E-13 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 Gene3D G3DSA:3.40.50.2300 10 130 2.2E-23 T 11-11-2016 ATY42_RS09005 05c7a7a62feb9476f09102d3d9e1bcbc 240 SMART SM00448 11 122 2.3E-11 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS20035 8cb0134876f02d3bde84194b080f2729 204 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 15 177 1.8E-9 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS20035 8cb0134876f02d3bde84194b080f2729 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 17 171 6.9E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS20035 8cb0134876f02d3bde84194b080f2729 204 Pfam PF00702 haloacid dehalogenase-like hydrolase 67 171 4.9E-15 T 11-11-2016 ATY42_RS20035 8cb0134876f02d3bde84194b080f2729 204 SUPERFAMILY SSF56784 11 199 5.83E-36 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS20035 8cb0134876f02d3bde84194b080f2729 204 Gene3D G3DSA:3.40.50.1000 71 199 3.2E-28 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS20035 8cb0134876f02d3bde84194b080f2729 204 Gene3D G3DSA:3.40.50.1000 9 31 3.2E-28 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Gene3D G3DSA:2.40.50.140 364 445 9.5E-26 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Gene3D G3DSA:2.40.50.140 449 531 8.9E-19 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SMART SM00316 450 521 4.2E-15 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SMART SM00316 363 435 1.1E-20 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SMART SM00316 191 261 1.3E-28 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SMART SM00316 20 88 5.7E-6 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SMART SM00316 276 348 1.2E-27 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SMART SM00316 104 172 2.1E-8 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SUPERFAMILY SSF50249 343 441 6.71E-23 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Pfam PF00575 S1 RNA binding domain 18 87 1.2E-4 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Pfam PF00575 S1 RNA binding domain 362 435 1.0E-19 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Pfam PF00575 S1 RNA binding domain 451 521 3.8E-12 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Pfam PF00575 S1 RNA binding domain 277 348 1.3E-22 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Pfam PF00575 S1 RNA binding domain 104 172 8.0E-10 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Pfam PF00575 S1 RNA binding domain 189 261 1.5E-22 T 11-11-2016 IPR003029 S1 domain GO:0003676 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SUPERFAMILY SSF50249 191 277 4.62E-27 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SUPERFAMILY SSF50249 1 113 2.31E-21 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SUPERFAMILY SSF50249 256 364 1.27E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 22 40 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 109 125 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 331 349 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 291 310 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 85 104 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 127 144 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 40 54 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 156 176 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PRINTS PR00681 Ribosomal protein S1 signature 213 234 2.7E-86 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Gene3D G3DSA:2.40.50.140 22 102 2.7E-10 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Gene3D G3DSA:2.40.50.140 193 279 7.5E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Gene3D G3DSA:2.40.50.140 281 363 3.1E-31 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SUPERFAMILY SSF50249 430 537 2.16E-20 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 SUPERFAMILY SSF50249 104 186 3.17E-14 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 PIRSF PIRSF002111 1 535 1.2E-213 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 521 1.1E-209 T 11-11-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 ATY42_RS10620 f7e121438db7f6bd7356a57e45dc87f4 561 Gene3D G3DSA:2.40.50.140 103 173 9.5E-15 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 96 750 4.3E-183 T 11-11-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 Pfam PF03958 Bacterial type II/III secretion system short domain 192 250 7.4E-7 T 11-11-2016 IPR005644 NolW-like ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 Pfam PF03958 Bacterial type II/III secretion system short domain 257 324 2.6E-7 T 11-11-2016 IPR005644 NolW-like ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 Pfam PF03958 Bacterial type II/III secretion system short domain 332 482 9.8E-9 T 11-11-2016 IPR005644 NolW-like ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 686 719 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 Pfam PF00263 Bacterial type II and III secretion system protein 566 741 7.1E-44 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 PRINTS PR00811 Bacterial general secretion pathway protein D signature 482 492 3.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 PRINTS PR00811 Bacterial general secretion pathway protein D signature 705 723 3.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 PRINTS PR00811 Bacterial general secretion pathway protein D signature 562 586 3.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS04125 7d52f687735573edbf758440e1a50899 770 PRINTS PR00811 Bacterial general secretion pathway protein D signature 728 742 3.6E-15 T 11-11-2016 IPR001775 GspD/PilQ family ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 SUPERFAMILY SSF56645 39 280 3.01E-52 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Gene3D G3DSA:1.20.140.10 270 458 2.1E-50 T 11-11-2016 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 SUPERFAMILY SSF47203 288 460 1.77E-46 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 34 8.3E-10 T 11-11-2016 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 164 272 1.1E-14 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 468 589 3.4E-28 T 11-11-2016 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 284 452 3.8E-23 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Gene3D G3DSA:1.10.540.10 40 161 2.3E-13 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 41 158 3.0E-6 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS09795 e9e077fc5c4882855cfefc843c532658 597 Gene3D G3DSA:2.40.110.10 162 269 7.9E-25 T 11-11-2016 ATY42_RS09665 8bbebcf771b04f259da70ed56df5b930 166 Pfam PF13508 Acetyltransferase (GNAT) domain 54 123 4.5E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS09665 8bbebcf771b04f259da70ed56df5b930 166 Gene3D G3DSA:3.40.630.30 2 131 1.2E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS09665 8bbebcf771b04f259da70ed56df5b930 166 SUPERFAMILY SSF55729 2 135 2.3E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 244 1.3E-51 T 11-11-2016 ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 189 0.0032 T 11-11-2016 ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 Gene3D G3DSA:3.40.50.720 4 245 4.7E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 4 245 3.3E-97 T 11-11-2016 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.5E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.5E-35 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 SUPERFAMILY SSF51735 4 245 5.72E-66 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 6.4E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.4E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS05330 bea53167e3c34b98b68887b585171909 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.4E-12 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 SMART SM00843 718 783 1.7E-40 T 11-11-2016 IPR018541 FtsK gamma domain ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 Pfam PF01580 FtsK/SpoIIIE family 394 607 1.9E-64 T 11-11-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 SMART SM00382 429 628 0.0072 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 SUPERFAMILY SSF46785 718 783 3.86E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 Pfam PF09397 Ftsk gamma domain 720 780 2.4E-27 T 11-11-2016 IPR018541 FtsK gamma domain ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 31 204 1.6E-39 T 11-11-2016 IPR025199 DNA translocase FtsK, 4TM region ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 Gene3D G3DSA:3.40.50.300 368 674 3.0E-91 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12625 7759ad26bcb7a3a28927b387c8c6ab51 786 SUPERFAMILY SSF52540 366 679 6.91E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 Gene3D G3DSA:1.10.10.10 3 127 3.6E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 Pfam PF12802 MarR family 28 78 6.1E-9 T 11-11-2016 ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 53 87 - T 11-11-2016 IPR023187 Transcriptional regulator MarR-type, conserved site ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 104 124 5.4E-12 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 70 5.4E-12 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 38 54 5.4E-12 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 90 5.4E-12 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 SUPERFAMILY SSF46785 2 130 5.55E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS23135 a0f995112afdb30189dfc6fef1636ddc 147 SMART SM00347 13 114 2.5E-9 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 3.8E-94 T 11-11-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Gene3D G3DSA:3.40.50.300 19 228 1.1E-96 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 SUPERFAMILY SSF52540 21 223 1.44E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 SMART SM00387 764 876 2.6E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 SUPERFAMILY SSF52402 250 362 8.37E-12 T 11-11-2016 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Pfam PF00512 His Kinase A (phospho-acceptor) domain 653 719 1.1E-11 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Pfam PF13493 Domain of unknown function (DUF4118) 398 498 1.3E-22 T 11-11-2016 IPR025201 Sensor protein KdpD, transmembrane domain ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 801 815 3.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 829 3.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 860 873 3.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 PRINTS PR00344 Bacterial sensor protein C-terminal signature 835 853 3.2E-15 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Gene3D G3DSA:1.10.287.130 648 716 4.1E-16 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 SMART SM00388 652 720 6.7E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Gene3D G3DSA:3.40.50.620 248 362 8.5E-13 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Gene3D G3DSA:3.30.565.10 723 878 9.0E-35 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 SUPERFAMILY SSF47384 648 719 9.02E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Gene3D G3DSA:1.20.120.620 393 496 2.3E-29 T 11-11-2016 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 769 874 1.5E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 Pfam PF00582 Universal stress protein family 249 360 1.3E-5 T 11-11-2016 IPR006016 UspA GO:0006950 ATY42_RS19345 17a8ae936fe0d0c1852cb4286d2fe5cc 886 SUPERFAMILY SSF55874 710 877 5.76E-37 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS06960 2f081a8f0116c7b13370e540b56a9267 345 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS06960 2f081a8f0116c7b13370e540b56a9267 345 Pfam PF00437 Type II/IV secretion system protein 12 268 3.1E-46 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS06960 2f081a8f0116c7b13370e540b56a9267 345 Gene3D G3DSA:3.40.50.300 100 339 4.4E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06960 2f081a8f0116c7b13370e540b56a9267 345 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 9.6E-157 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 ATY42_RS06960 2f081a8f0116c7b13370e540b56a9267 345 SUPERFAMILY SSF52540 5 336 1.16E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06960 2f081a8f0116c7b13370e540b56a9267 345 SMART SM00382 122 248 0.0059 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 8.2E-47 T 11-11-2016 ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 PIRSF PIRSF004846 2 258 4.6E-70 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 1.3E-58 T 11-11-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 Gene3D G3DSA:3.40.190.10 107 218 8.3E-37 T 11-11-2016 ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 Gene3D G3DSA:3.40.190.10 10 100 2.9E-18 T 11-11-2016 ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 Gene3D G3DSA:3.40.190.10 219 255 2.9E-18 T 11-11-2016 ATY42_RS05825 e8e49aa906f40ed3ed39f6adcd6569b6 258 SUPERFAMILY SSF53850 28 254 9.13E-64 T 11-11-2016 ATY42_RS11860 0227e85f5e65f34f0458e742c6c97453 322 Gene3D G3DSA:3.90.420.10 67 319 5.5E-75 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ATY42_RS11860 0227e85f5e65f34f0458e742c6c97453 322 SUPERFAMILY SSF56524 67 318 1.7E-91 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ATY42_RS11860 0227e85f5e65f34f0458e742c6c97453 322 Pfam PF00174 Oxidoreductase molybdopterin binding domain 99 254 8.4E-32 T 11-11-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 ATY42_RS11860 0227e85f5e65f34f0458e742c6c97453 322 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 3 322 59.444 T 11-11-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 468 2.9E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 413 2.9E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 448 2.9E-11 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 Gene3D G3DSA:1.10.287.130 249 304 1.2E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 Gene3D G3DSA:3.30.565.10 321 468 6.1E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 SMART SM00387 358 471 1.6E-25 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 359 469 2.9E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 SMART SM00388 256 313 0.0079 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 SUPERFAMILY SSF47384 239 304 1.47E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS01935 f5dc2364ff22114004598dc9d3e4cab8 471 SUPERFAMILY SSF55874 306 468 1.96E-24 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS18145 8b30e90fac263bfb3a494406ba48f0d4 194 SUPERFAMILY SSF53178 5 189 5.49E-64 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATY42_RS18145 8b30e90fac263bfb3a494406ba48f0d4 194 Pfam PF01195 Peptidyl-tRNA hydrolase 6 187 1.9E-50 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATY42_RS18145 8b30e90fac263bfb3a494406ba48f0d4 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 182 33.624 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATY42_RS18145 8b30e90fac263bfb3a494406ba48f0d4 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 189 7.2E-57 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATY42_RS18145 8b30e90fac263bfb3a494406ba48f0d4 194 Gene3D G3DSA:3.40.50.1470 5 190 1.7E-64 T 11-11-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ATY42_RS18145 8b30e90fac263bfb3a494406ba48f0d4 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 17 30 - T 11-11-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 Gene3D G3DSA:3.40.50.800 370 459 7.9E-24 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 Gene3D G3DSA:3.30.930.10 270 362 3.2E-88 T 11-11-2016 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 Gene3D G3DSA:3.30.930.10 2 212 3.2E-88 T 11-11-2016 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 Pfam PF13393 Histidyl-tRNA synthetase 90 353 1.4E-27 T 11-11-2016 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 2 465 28.397 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 SUPERFAMILY SSF52954 369 460 6.87E-20 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 PIRSF PIRSF001549 1 462 1.7E-139 T 11-11-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 SUPERFAMILY SSF55681 4 363 4.98E-72 T 11-11-2016 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 451 1.3E-120 T 11-11-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ATY42_RS11000 ccd10249b4937468a459eb426add5878 470 Pfam PF03129 Anticodon binding domain 372 459 2.0E-12 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 Pfam PF01761 3-dehydroquinate synthase 74 337 1.3E-102 T 11-11-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 18 366 3.5E-108 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 PIRSF PIRSF001455 20 369 1.4E-102 T 11-11-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 Gene3D G3DSA:1.20.1090.10 180 368 1.1E-62 T 11-11-2016 ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 8 370 39.353 T 11-11-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 Gene3D G3DSA:3.40.50.1970 14 179 2.2E-59 T 11-11-2016 ATY42_RS06100 2ebc11f44944dab1e390d0da2647c7f2 370 SUPERFAMILY SSF56796 15 368 7.85E-104 T 11-11-2016 ATY42_RS17850 02a6b29f2f52fd1ef41e250c370c1bf4 267 Pfam PF13469 Sulfotransferase family 5 201 3.7E-16 T 11-11-2016 ATY42_RS17850 02a6b29f2f52fd1ef41e250c370c1bf4 267 Gene3D G3DSA:3.40.50.300 5 202 8.7E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17850 02a6b29f2f52fd1ef41e250c370c1bf4 267 SUPERFAMILY SSF52540 2 252 5.31E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03810 0303f242ebe5a4fe3500ce95e5a3d381 272 Pfam PF01061 ABC-2 type transporter 21 232 2.2E-30 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATY42_RS03810 0303f242ebe5a4fe3500ce95e5a3d381 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 153 177 5.3E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03810 0303f242ebe5a4fe3500ce95e5a3d381 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 210 229 5.3E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03810 0303f242ebe5a4fe3500ce95e5a3d381 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 190 209 5.3E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03810 0303f242ebe5a4fe3500ce95e5a3d381 272 PRINTS PR00164 ABC-2 type transport system membrane protein signature 41 62 5.3E-7 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03810 0303f242ebe5a4fe3500ce95e5a3d381 272 PIRSF PIRSF006648 4 266 1.9E-16 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 SMART SM00387 423 532 1.6E-23 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 491 1.1E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 SUPERFAMILY SSF55874 373 528 2.1E-30 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 529 8.2E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 SMART SM00388 315 381 3.7E-15 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 Gene3D G3DSA:3.30.565.10 367 529 1.8E-32 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 Gene3D G3DSA:1.10.287.130 315 366 9.5E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 Pfam PF00512 His Kinase A (phospho-acceptor) domain 315 379 5.5E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 Gene3D G3DSA:3.30.450.20 202 262 8.2E-5 T 11-11-2016 ATY42_RS07815 7a0e91f68aa2a59cb3eea2c761376422 537 SUPERFAMILY SSF47384 312 379 1.51E-14 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS20920 e38093412cc0013502ec7f5b6f671669 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-11-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ATY42_RS20920 e38093412cc0013502ec7f5b6f671669 130 SUPERFAMILY SSF54211 6 130 1.44E-47 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS20920 e38093412cc0013502ec7f5b6f671669 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.2E-48 T 11-11-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ATY42_RS20920 e38093412cc0013502ec7f5b6f671669 130 Gene3D G3DSA:3.30.230.10 5 130 1.9E-51 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS20920 e38093412cc0013502ec7f5b6f671669 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 32.597 T 11-11-2016 IPR023035 Ribosomal protein S9, bacterial/plastid ATY42_RS04580 183830832f848ebc29c3e3a0cde31801 382 SUPERFAMILY SSF109604 140 350 1.51E-39 T 11-11-2016 ATY42_RS04580 183830832f848ebc29c3e3a0cde31801 382 SUPERFAMILY SSF52172 12 142 1.02E-11 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS04580 183830832f848ebc29c3e3a0cde31801 382 PIRSF PIRSF036883 7 380 4.0E-166 T 11-11-2016 IPR014626 Signal transduction response regulator with modified HD-GYP domain, putative ATY42_RS04580 183830832f848ebc29c3e3a0cde31801 382 Pfam PF08668 HDOD domain 151 326 3.1E-27 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD ATY42_RS04580 183830832f848ebc29c3e3a0cde31801 382 Gene3D G3DSA:3.40.50.2300 11 131 1.4E-9 T 11-11-2016 ATY42_RS04580 183830832f848ebc29c3e3a0cde31801 382 Gene3D G3DSA:1.10.3150.10 132 350 5.8E-48 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD ATY42_RS14945 662a20810408aa0270aad19c26bd1b62 280 Pfam PF13649 Methyltransferase domain 65 159 1.8E-16 T 11-11-2016 ATY42_RS14945 662a20810408aa0270aad19c26bd1b62 280 Gene3D G3DSA:3.40.50.150 23 228 2.0E-33 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14945 662a20810408aa0270aad19c26bd1b62 280 SUPERFAMILY SSF53335 22 280 1.67E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS17700 df3aadb013d44c47769d0be3a3fd39a1 292 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 210 273 4.4E-15 T 11-11-2016 ATY42_RS17700 df3aadb013d44c47769d0be3a3fd39a1 292 Gene3D G3DSA:3.30.1380.10 163 226 5.8E-5 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 ATY42_RS17700 df3aadb013d44c47769d0be3a3fd39a1 292 SUPERFAMILY SSF55166 153 275 9.68E-25 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 ATY42_RS10740 41fa4b311989453088e80dd72a8a3350 365 Pfam PF03601 Conserved hypothetical protein 698 16 342 5.4E-104 T 11-11-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ATY42_RS10740 41fa4b311989453088e80dd72a8a3350 365 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 13 364 3.1E-111 T 11-11-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SUPERFAMILY SSF48452 382 551 1.01E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 Gene3D G3DSA:1.25.40.10 47 222 3.6E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 Pfam PF13429 Tetratricopeptide repeat 276 539 2.1E-7 T 11-11-2016 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SMART SM00028 177 210 46.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SMART SM00028 415 448 3.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SMART SM00028 381 414 240.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SMART SM00028 517 550 1.5 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SMART SM00028 449 483 140.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 Gene3D G3DSA:1.25.40.10 276 551 1.6E-35 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 Gene3D G3DSA:1.25.40.10 223 275 6.3E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18175 36086df9c92a2597e5da8532b5469daa 562 SUPERFAMILY SSF48452 176 365 2.1E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS15495 4a219c7d3ffcd21fd96a404821dfa33b 85 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 40 59 6.0E-6 T 11-11-2016 IPR019626 Stress-induced protein, KGG, repeat ATY42_RS05565 7577c43f750f8f4cf0aa4645e2bd0ca7 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 122 1.8E-9 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS05565 7577c43f750f8f4cf0aa4645e2bd0ca7 131 Gene3D G3DSA:3.10.180.10 1 130 4.9E-19 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS05565 7577c43f750f8f4cf0aa4645e2bd0ca7 131 SUPERFAMILY SSF54593 3 129 1.01E-26 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 Gene3D G3DSA:3.40.630.10 21 76 8.5E-59 T 11-11-2016 ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 Gene3D G3DSA:3.40.630.10 283 531 8.5E-59 T 11-11-2016 ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 SUPERFAMILY SSF52025 119 214 4.58E-8 T 11-11-2016 ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 SUPERFAMILY SSF53187 22 70 3.59E-61 T 11-11-2016 ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 SUPERFAMILY SSF53187 282 526 3.59E-61 T 11-11-2016 ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 Pfam PF02225 PA domain 130 216 2.0E-5 T 11-11-2016 IPR003137 PA domain ATY42_RS20155 5c318a26df040378a7c31ec76027373a 549 Pfam PF04389 Peptidase family M28 298 508 2.2E-47 T 11-11-2016 IPR007484 Peptidase M28 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Gene3D G3DSA:3.30.499.10 405 522 1.0E-63 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 8.8E-93 T 11-11-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 PIRSF PIRSF036687 1 861 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Pfam PF00330 Aconitase family (aconitate hydratase) 475 817 9.5E-40 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Pfam PF11791 Aconitate B N-terminal domain 4 156 7.1E-64 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 SUPERFAMILY SSF52016 162 372 1.65E-64 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Gene3D G3DSA:3.40.1060.10 523 685 1.3E-85 T 11-11-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 ProSitePatterns PS00450 Aconitase family signature 1. 705 722 - T 11-11-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Gene3D G3DSA:3.30.499.10 686 861 1.3E-52 T 11-11-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 856 0.0 T 11-11-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 SUPERFAMILY SSF74778 1 160 5.62E-66 T 11-11-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 SUPERFAMILY SSF53732 380 856 2.09E-145 T 11-11-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 ATY42_RS14295 8701c271e00d943e41ac866714fdc824 863 Gene3D G3DSA:3.20.19.10 162 361 2.3E-86 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS17310 099e4e8cdffb4bf384a3d72065576280 259 Gene3D G3DSA:3.40.50.1240 17 234 2.7E-44 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS17310 099e4e8cdffb4bf384a3d72065576280 259 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 22 31 - T 11-11-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 ATY42_RS17310 099e4e8cdffb4bf384a3d72065576280 259 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 20 234 3.1E-33 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS17310 099e4e8cdffb4bf384a3d72065576280 259 SUPERFAMILY SSF53254 19 224 2.23E-42 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS17310 099e4e8cdffb4bf384a3d72065576280 259 SMART SM00855 19 193 5.0E-18 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS05685 737e237be2f6fb3d39ce38fe6d6363fc 339 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 54 184 6.0E-63 T 11-11-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ATY42_RS05685 737e237be2f6fb3d39ce38fe6d6363fc 339 SUPERFAMILY SSF52540 25 311 2.12E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05685 737e237be2f6fb3d39ce38fe6d6363fc 339 Gene3D G3DSA:3.40.50.300 36 200 1.2E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05685 737e237be2f6fb3d39ce38fe6d6363fc 339 PIRSF PIRSF002849 9 339 1.8E-125 T 11-11-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted ATY42_RS05685 737e237be2f6fb3d39ce38fe6d6363fc 339 Gene3D G3DSA:1.10.8.300 223 335 3.9E-38 T 11-11-2016 ATY42_RS16105 cb8677b08293b2e5fccd6ba9b896e777 199 Pfam PF01914 MarC family integral membrane protein 3 191 2.7E-48 T 11-11-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 SUPERFAMILY SSF51735 2 251 1.94E-69 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 2 252 4.1E-109 T 11-11-2016 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.7E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 5.7E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 5.7E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 7.3E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 7.3E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 7.3E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.3E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 7.3E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 7.3E-31 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 250 1.2E-47 T 11-11-2016 ATY42_RS10825 1c66fe5f145bf03232ed9df94d8d40ef 252 Gene3D G3DSA:3.40.50.720 3 250 7.1E-71 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS21650 37ece761737fd27c247ef9630289e1be 789 SUPERFAMILY SSF82866 210 393 3.92E-20 T 11-11-2016 ATY42_RS21650 37ece761737fd27c247ef9630289e1be 789 Gene3D G3DSA:1.20.1640.10 635 771 1.4E-10 T 11-11-2016 ATY42_RS21650 37ece761737fd27c247ef9630289e1be 789 Gene3D G3DSA:1.20.1640.10 213 393 5.5E-17 T 11-11-2016 ATY42_RS21650 37ece761737fd27c247ef9630289e1be 789 SUPERFAMILY SSF82866 617 771 1.7E-17 T 11-11-2016 ATY42_RS21650 37ece761737fd27c247ef9630289e1be 789 Pfam PF03176 MMPL family 191 415 7.0E-7 T 11-11-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 ATY42_RS15380 6558db3ad615a7c1fa82b214d4aa283f 82 SUPERFAMILY SSF53098 3 69 5.5E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15380 6558db3ad615a7c1fa82b214d4aa283f 82 Pfam PF13683 Integrase core domain 1 65 2.7E-28 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS15380 6558db3ad615a7c1fa82b214d4aa283f 82 Gene3D G3DSA:3.30.420.10 2 66 9.9E-16 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS02825 bfbc1b40e4fe4b752dce36f13d1d9048 274 SUPERFAMILY SSF53448 6 155 1.2E-22 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS02825 bfbc1b40e4fe4b752dce36f13d1d9048 274 Gene3D G3DSA:3.90.550.10 11 95 1.8E-11 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS02825 bfbc1b40e4fe4b752dce36f13d1d9048 274 Pfam PF00535 Glycosyl transferase family 2 14 120 7.6E-16 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 60 76 4.1E-12 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 84 100 4.1E-12 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 158 176 4.1E-12 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 Gene3D G3DSA:1.20.1260.10 21 181 2.8E-65 T 11-11-2016 IPR012347 Ferritin-related ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 Pfam PF00210 Ferritin-like domain 42 181 3.8E-29 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 SUPERFAMILY SSF47240 27 181 6.32E-45 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 ProSitePatterns PS00818 Dps protein family signature 1. 60 76 - T 11-11-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 ProSitePatterns PS00819 Dps protein family signature 2. 86 100 - T 11-11-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ATY42_RS08340 ccd47be4438b3aaddeb35b3b2a2ef944 181 PIRSF PIRSF005900 19 181 2.1E-46 T 11-11-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 SUPERFAMILY SSF54373 365 475 5.36E-30 T 11-11-2016 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Gene3D G3DSA:3.40.50.720 62 82 6.7E-9 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Pfam PF01593 Flavin containing amine oxidoreductase 64 524 1.0E-60 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Gene3D G3DSA:3.40.50.1770 10 61 1.3E-4 T 11-11-2016 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Gene3D G3DSA:3.90.660.10 369 466 7.2E-57 T 11-11-2016 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Gene3D G3DSA:3.90.660.10 83 173 7.2E-57 T 11-11-2016 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 56 78 3.4E-5 T 11-11-2016 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 326 3.4E-5 T 11-11-2016 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Gene3D G3DSA:3.50.50.60 269 365 8.7E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 Gene3D G3DSA:3.50.50.60 492 527 8.7E-18 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 SUPERFAMILY SSF51905 489 526 2.68E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS05960 0cce0a6a50adaef6767a5345934c920c 535 SUPERFAMILY SSF51905 52 385 2.68E-49 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS22255 36ec3772d4b95b00fffd1c94464ae243 325 Gene3D G3DSA:3.20.20.80 36 321 8.0E-71 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS22255 36ec3772d4b95b00fffd1c94464ae243 325 SMART SM00633 58 321 2.4E-18 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 ATY42_RS22255 36ec3772d4b95b00fffd1c94464ae243 325 SUPERFAMILY SSF51445 24 321 1.52E-80 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS22255 36ec3772d4b95b00fffd1c94464ae243 325 Pfam PF00331 Glycosyl hydrolase family 10 36 317 1.2E-48 T 11-11-2016 IPR001000 Glycoside hydrolase family 10 domain GO:0004553|GO:0005975 MetaCyc: PWY-6784 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PIRSF PIRSF001415 1 329 3.1E-148 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 191 210 2.3E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 245 261 2.3E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 153 172 2.3E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 300 319 2.3E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 270 285 2.3E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 2.3E-57 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 SUPERFAMILY SSF51569 2 328 6.15E-141 T 11-11-2016 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 SMART SM01004 3 326 9.0E-237 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 325 2.3E-138 T 11-11-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 Gene3D G3DSA:3.20.20.70 2 328 5.8E-149 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS01825 9a11e39aac1ee3ef98ee808126839500 330 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 245 257 - T 11-11-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 Pfam PF11741 AMIN domain 38 124 4.8E-10 T 11-11-2016 IPR021731 AMIN domain ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 164 382 1.4E-42 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 Gene3D G3DSA:3.40.630.40 162 259 1.2E-53 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 Gene3D G3DSA:3.40.630.40 310 385 1.2E-53 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 SUPERFAMILY SSF53187 162 258 3.45E-49 T 11-11-2016 ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 SUPERFAMILY SSF53187 309 385 3.45E-49 T 11-11-2016 ATY42_RS11770 f29af4122730d8ee5c4af644ac0be087 392 SMART SM00646 224 382 4.0E-51 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS08370 4077c0d71fd39893ae151d1d46a18a94 504 SUPERFAMILY SSF53474 312 373 1.17E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08370 4077c0d71fd39893ae151d1d46a18a94 504 SUPERFAMILY SSF53474 203 259 1.17E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08370 4077c0d71fd39893ae151d1d46a18a94 504 Pfam PF10142 PhoPQ-activated pathogenicity-related protein 49 421 4.7E-130 T 11-11-2016 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type ATY42_RS08370 4077c0d71fd39893ae151d1d46a18a94 504 Gene3D G3DSA:3.40.50.1820 142 372 1.1E-13 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08370 4077c0d71fd39893ae151d1d46a18a94 504 PIRSF PIRSF014728 1 498 1.0E-239 T 11-11-2016 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Gene3D G3DSA:2.40.170.20 343 544 2.7E-51 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Gene3D G3DSA:2.40.170.20 615 977 2.7E-51 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Gene3D G3DSA:2.40.170.20 276 277 2.7E-51 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Gene3D G3DSA:2.40.170.20 188 243 2.7E-51 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Pfam PF00593 TonB dependent receptor 687 974 3.9E-24 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 SUPERFAMILY SSF56935 344 549 3.4E-74 T 11-11-2016 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 SUPERFAMILY SSF56935 811 977 3.4E-74 T 11-11-2016 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 SUPERFAMILY SSF56935 49 250 3.4E-74 T 11-11-2016 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 SUPERFAMILY SSF56935 605 777 3.4E-74 T 11-11-2016 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 183 1.3E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 960 977 - T 11-11-2016 IPR010917 TonB-dependent receptor, conserved site ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 53 977 4.3E-239 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS22275 d2d12a886cd7aee111d23643fe104fb6 977 Gene3D G3DSA:2.170.130.10 79 187 9.7E-16 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS09540 3d17930ffb1d1dc18e35e754124b41e0 418 SUPERFAMILY SSF53756 34 325 4.32E-30 T 11-11-2016 ATY42_RS09540 3d17930ffb1d1dc18e35e754124b41e0 418 Pfam PF02684 Lipid-A-disaccharide synthetase 34 380 1.7E-110 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS09540 3d17930ffb1d1dc18e35e754124b41e0 418 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 30 409 41.341 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS09540 3d17930ffb1d1dc18e35e754124b41e0 418 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 30 404 2.5E-112 T 11-11-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS09540 3d17930ffb1d1dc18e35e754124b41e0 418 Gene3D G3DSA:3.40.50.2000 185 381 2.8E-8 T 11-11-2016 ATY42_RS20735 ca957421eaea4414c6719224feae414d 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20735 ca957421eaea4414c6719224feae414d 320 SMART SM01126 137 285 3.7E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20735 ca957421eaea4414c6719224feae414d 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.1E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS03690 6bb986e3528834ff3fe0437a11346bdc 160 SMART SM00065 31 160 0.0024 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS03690 6bb986e3528834ff3fe0437a11346bdc 160 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 11-11-2016 IPR000614 Free Met sulfoxide reductase conserved site ATY42_RS03690 6bb986e3528834ff3fe0437a11346bdc 160 SUPERFAMILY SSF55781 13 159 2.55E-42 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS03690 6bb986e3528834ff3fe0437a11346bdc 160 Pfam PF13185 GAF domain 51 159 1.1E-11 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS03690 6bb986e3528834ff3fe0437a11346bdc 160 Gene3D G3DSA:3.30.450.40 12 155 1.1E-50 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 Gene3D G3DSA:1.10.287.990 20 89 5.4E-31 T 11-11-2016 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 PIRSF PIRSF000349 1 203 1.6E-82 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 SUPERFAMILY SSF46609 1 90 1.23E-37 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 SUPERFAMILY SSF54719 88 201 5.37E-46 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 5.7E-28 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 5.7E-28 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 PRINTS PR01703 Manganese superoxide dismutase signature 125 133 5.7E-28 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.7E-28 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.7E-28 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 197 8.0E-40 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS13415 50e4f6ccd017298832711c00edd3fd9a 203 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 2.4E-34 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS05915 ef94a986d56e28b453063efd9c966ba1 219 SUPERFAMILY SSF56112 17 148 9.56E-15 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS05915 ef94a986d56e28b453063efd9c966ba1 219 Gene3D G3DSA:1.10.510.10 97 150 1.2E-8 T 11-11-2016 ATY42_RS08485 ac43b832c00765e499643d89be4dfeaf 400 Gene3D G3DSA:3.40.50.180 230 369 5.7E-14 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS08485 ac43b832c00765e499643d89be4dfeaf 400 SUPERFAMILY SSF52738 226 398 2.09E-22 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS08485 ac43b832c00765e499643d89be4dfeaf 400 Pfam PF01339 CheB methylesterase 231 366 1.2E-10 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS08485 ac43b832c00765e499643d89be4dfeaf 400 PIRSF PIRSF036592 1 400 1.6E-206 T 11-11-2016 IPR012071 Chemotaxis glutamate methyltransferase ATY42_RS19725 9d1395a4f0272abc8bf066868acba061 342 Gene3D G3DSA:3.40.50.10490 184 342 9.2E-40 T 11-11-2016 ATY42_RS19725 9d1395a4f0272abc8bf066868acba061 342 Gene3D G3DSA:3.40.50.10490 8 166 2.6E-30 T 11-11-2016 ATY42_RS19725 9d1395a4f0272abc8bf066868acba061 342 SUPERFAMILY SSF53697 11 340 4.66E-77 T 11-11-2016 ATY42_RS19725 9d1395a4f0272abc8bf066868acba061 342 Pfam PF01380 SIS domain 204 301 1.1E-14 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 ATY42_RS19725 9d1395a4f0272abc8bf066868acba061 342 Pfam PF01380 SIS domain 49 169 9.3E-20 T 11-11-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 336 497 4.8E-15 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 Gene3D G3DSA:2.140.10.30 198 513 2.8E-36 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 Gene3D G3DSA:2.140.10.30 20 157 2.8E-36 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 Gene3D G3DSA:3.40.50.1820 529 782 8.2E-69 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 SUPERFAMILY SSF82171 320 528 8.76E-38 T 11-11-2016 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 SUPERFAMILY SSF82171 228 247 8.76E-38 T 11-11-2016 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 SUPERFAMILY SSF82171 42 156 8.76E-38 T 11-11-2016 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 SUPERFAMILY SSF82171 280 286 8.76E-38 T 11-11-2016 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 Pfam PF00326 Prolyl oligopeptidase family 589 783 2.6E-42 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS21705 4a2a346870c942e12206ea0619a02da1 786 SUPERFAMILY SSF53474 529 781 1.61E-60 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22165 aea2e7ae4220369dd69e39c8eba38da3 244 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 70 7.6E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS22165 aea2e7ae4220369dd69e39c8eba38da3 244 PRINTS PR00111 Alpha/beta hydrolase fold signature 11 26 7.6E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS22165 aea2e7ae4220369dd69e39c8eba38da3 244 PRINTS PR00111 Alpha/beta hydrolase fold signature 71 84 7.6E-7 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS22165 aea2e7ae4220369dd69e39c8eba38da3 244 SUPERFAMILY SSF53474 5 243 1.79E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22165 aea2e7ae4220369dd69e39c8eba38da3 244 Gene3D G3DSA:3.40.50.1820 3 243 4.1E-38 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22165 aea2e7ae4220369dd69e39c8eba38da3 244 Pfam PF00561 alpha/beta hydrolase fold 8 90 2.6E-16 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS22430 b06ada98430cf6efae6634c5af5fd26b 157 Pfam PF13503 Domain of unknown function (DUF4123) 4 124 7.2E-21 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 7 85 2.0E-39 T 11-11-2016 ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 Gene3D G3DSA:1.10.287.10 4 86 9.1E-38 T 11-11-2016 IPR009068 S15/NS1, RNA-binding ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 ProSitePatterns PS00362 Ribosomal protein S15 signature. 36 66 - T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 86 1.4E-37 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 86 21.612 T 11-11-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 SUPERFAMILY SSF47060 4 86 2.85E-34 T 11-11-2016 IPR009068 S15/NS1, RNA-binding ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 Pfam PF00312 Ribosomal protein S15 6 85 2.6E-37 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS16155 e7249a8de4e808c11e1fcaf781feddac 86 SMART SM01387 5 85 4.7E-50 T 11-11-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS14120 88abce92ed92fcc50f38b33c5ee861d4 130 SUPERFAMILY SSF56935 36 122 5.49E-10 T 11-11-2016 ATY42_RS14120 88abce92ed92fcc50f38b33c5ee861d4 130 Gene3D G3DSA:2.170.130.10 50 123 1.1E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14120 88abce92ed92fcc50f38b33c5ee861d4 130 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 123 1.2E-4 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS14750 44160658bf1821f0ee24705de4ccf2fb 101 SMART SM01103 5 88 1.5E-38 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ATY42_RS14750 44160658bf1821f0ee24705de4ccf2fb 101 SUPERFAMILY SSF75471 4 98 3.01E-28 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ATY42_RS14750 44160658bf1821f0ee24705de4ccf2fb 101 Pfam PF01985 CRS1 / YhbY (CRM) domain 5 88 1.1E-20 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ATY42_RS14750 44160658bf1821f0ee24705de4ccf2fb 101 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 5 100 2.5E-26 T 11-11-2016 IPR017924 RNA-binding protein YhbY GO:0003723 ATY42_RS14750 44160658bf1821f0ee24705de4ccf2fb 101 Gene3D G3DSA:3.30.110.60 5 98 2.1E-29 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ATY42_RS14750 44160658bf1821f0ee24705de4ccf2fb 101 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 11 100 2.0E-45 T 11-11-2016 IPR001890 RNA-binding, CRM domain GO:0003723 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 SUPERFAMILY SSF52161 1 140 1.96E-57 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-11-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 Gene3D G3DSA:3.90.1180.10 3 141 1.4E-60 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 27.86 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 142 1.9E-62 T 11-11-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 PIRSF PIRSF002181 1 142 2.7E-49 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATY42_RS20925 8ba4f024e059de10681140fc3d0aa862 142 Pfam PF00572 Ribosomal protein L13 15 138 6.7E-54 T 11-11-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 Gene3D G3DSA:3.20.70.20 700 818 5.2E-62 T 11-11-2016 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 Gene3D G3DSA:3.20.70.20 478 659 5.2E-62 T 11-11-2016 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 Gene3D G3DSA:3.20.70.20 199 415 5.2E-62 T 11-11-2016 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 211 819 8.1E-167 T 11-11-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 SUPERFAMILY SSF51998 293 821 9.77E-163 T 11-11-2016 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 207 290 6.3E-15 T 11-11-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 573 596 2.5E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 639 662 2.5E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 700 727 2.5E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 369 388 2.5E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 512 523 2.5E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 611 633 2.5E-37 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 689 711 - T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 SUPERFAMILY SSF48168 71 292 1.12E-48 T 11-11-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02220 3f5ea2ce4666efa15e84bbc74ffebbec 832 Pfam PF02867 Ribonucleotide reductase, barrel domain 294 816 1.8E-144 T 11-11-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02240 5bb10595782a9b41074d3c2e3374fa62 108 Gene3D G3DSA:3.40.30.10 4 106 5.7E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS02240 5bb10595782a9b41074d3c2e3374fa62 108 Pfam PF00085 Thioredoxin 6 104 2.7E-10 T 11-11-2016 IPR013766 Thioredoxin domain GO:0045454 ATY42_RS02240 5bb10595782a9b41074d3c2e3374fa62 108 SUPERFAMILY SSF52833 3 106 3.44E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS06070 3d00fec3a82379f82d91e5fd3140c13b 1238 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 726 944 8.3E-146 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS06070 3d00fec3a82379f82d91e5fd3140c13b 1238 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 289 436 7.7E-93 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS10915 514ad8f74323de9808cd40c13f262a89 318 Pfam PF13936 Helix-turn-helix domain 3 45 9.2E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS10915 514ad8f74323de9808cd40c13f262a89 318 Gene3D G3DSA:3.30.420.10 165 307 9.5E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10915 514ad8f74323de9808cd40c13f262a89 318 Pfam PF00665 Integrase core domain 175 267 3.1E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS10915 514ad8f74323de9808cd40c13f262a89 318 SUPERFAMILY SSF53098 165 308 3.19E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 Pfam PF00072 Response regulator receiver domain 4 111 4.2E-24 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 SMART SM00448 1 112 3.7E-32 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 SUPERFAMILY SSF52172 1 176 1.99E-36 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 218 1.1E-15 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 SMART SM00862 145 218 3.3E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 Gene3D G3DSA:1.10.10.10 124 220 4.1E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05345 91dc6a6335143aca737b936f6fbe3ff3 233 Gene3D G3DSA:3.40.50.2300 1 123 1.3E-35 T 11-11-2016 ATY42_RS18955 1bd30c7267efe6816f438043d6697df5 199 SMART SM00382 5 189 8.2E-16 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS18955 1bd30c7267efe6816f438043d6697df5 199 Pfam PF00005 ABC transporter 1 141 6.8E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS18955 1bd30c7267efe6816f438043d6697df5 199 Gene3D G3DSA:3.40.50.300 1 195 4.2E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18955 1bd30c7267efe6816f438043d6697df5 199 SUPERFAMILY SSF52540 1 195 2.03E-60 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18955 1bd30c7267efe6816f438043d6697df5 199 ProSitePatterns PS00211 ABC transporters family signature. 114 128 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 11 22 6.1E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 6.1E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 6.1E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 6.1E-7 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 14 190 6.0E-25 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 SUPERFAMILY SSF56784 10 220 3.42E-47 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 Gene3D G3DSA:3.40.50.1000 10 25 9.8E-41 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 Gene3D G3DSA:3.40.50.1000 96 221 9.8E-41 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03395 f7ab19cd5cae0b8cb2144e7fa6b287eb 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 190 3.2E-16 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03385 9d9a6a3e3fec8c8552b64f46ead30cea 355 SUPERFAMILY SSF53335 168 345 1.72E-21 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS03385 9d9a6a3e3fec8c8552b64f46ead30cea 355 Gene3D G3DSA:3.40.50.150 172 348 2.4E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS03385 9d9a6a3e3fec8c8552b64f46ead30cea 355 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 277 283 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATY42_RS03385 9d9a6a3e3fec8c8552b64f46ead30cea 355 Pfam PF05175 Methyltransferase small domain 177 345 7.8E-51 T 11-11-2016 IPR007848 Methyltransferase small domain GO:0008168 ATY42_RS08355 e3f674d1f56bc3146551263ecfd03c80 95 SUPERFAMILY SSF53067 10 91 1.57E-8 T 11-11-2016 ATY42_RS08355 e3f674d1f56bc3146551263ecfd03c80 95 Gene3D G3DSA:3.40.367.20 9 73 3.8E-18 T 11-11-2016 ATY42_RS08355 e3f674d1f56bc3146551263ecfd03c80 95 Pfam PF02685 Glucokinase 9 89 3.9E-23 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS21245 68ac3029056cdaea0b3e00f2c4f80ebb 177 Pfam PF12802 MarR family 67 124 2.3E-9 T 11-11-2016 ATY42_RS21245 68ac3029056cdaea0b3e00f2c4f80ebb 177 Gene3D G3DSA:1.10.10.10 42 171 3.0E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21245 68ac3029056cdaea0b3e00f2c4f80ebb 177 SUPERFAMILY SSF46785 36 172 2.91E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21245 68ac3029056cdaea0b3e00f2c4f80ebb 177 SMART SM00347 61 161 2.0E-13 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 Gene3D G3DSA:1.10.1520.10 12 141 1.9E-39 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 Pfam PF14622 Ribonuclease-III-like 18 138 3.9E-31 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 Gene3D G3DSA:3.30.160.20 153 222 4.3E-23 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 12 221 1.4E-68 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 SMART SM00358 155 223 7.8E-19 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 27.546 T 11-11-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 SUPERFAMILY SSF54768 108 222 2.04E-25 T 11-11-2016 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 SMART SM00535 20 148 1.8E-47 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 SUPERFAMILY SSF69065 10 157 7.67E-44 T 11-11-2016 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 ATY42_RS08990 e0784787a0143da623c38353a1723e09 226 Pfam PF00035 Double-stranded RNA binding motif 155 222 1.7E-11 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain ATY42_RS03795 1f832c5fed8a72ea40309e18c1355d8a 331 Pfam PF00872 Transposase, Mutator family 2 305 1.7E-95 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS03795 1f832c5fed8a72ea40309e18c1355d8a 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS06815 1f832c5fed8a72ea40309e18c1355d8a 331 Pfam PF00872 Transposase, Mutator family 2 305 1.7E-95 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS06815 1f832c5fed8a72ea40309e18c1355d8a 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS05145 d1a9ba5e3851e5c8cc9f4e177a01caca 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 21.543 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ATY42_RS05145 d1a9ba5e3851e5c8cc9f4e177a01caca 106 PIRSF PIRSF004555 1 106 3.9E-35 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ATY42_RS05145 d1a9ba5e3851e5c8cc9f4e177a01caca 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 1.2E-31 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ATY42_RS05145 d1a9ba5e3851e5c8cc9f4e177a01caca 106 SUPERFAMILY SSF82607 9 100 6.28E-31 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ATY42_RS05145 d1a9ba5e3851e5c8cc9f4e177a01caca 106 Gene3D G3DSA:3.30.1310.10 1 106 1.1E-43 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ATY42_RS05145 d1a9ba5e3851e5c8cc9f4e177a01caca 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 96 7.5E-32 T 11-11-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family ATY42_RS10175 94e08e8e8e6886b9acfd7f0123571bfb 491 Pfam PF05598 Transposase domain (DUF772) 75 149 1.0E-13 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 Pfam PF01782 RimM N-terminal domain 10 92 6.6E-20 T 11-11-2016 IPR002676 RimM protein GO:0006364 ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 Gene3D G3DSA:2.30.30.240 101 170 1.2E-24 T 11-11-2016 ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 Gene3D G3DSA:2.40.30.60 1 95 3.6E-25 T 11-11-2016 IPR002676 RimM protein GO:0006364 ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 Pfam PF05239 PRC-barrel domain 98 165 1.0E-5 T 11-11-2016 IPR027275 PRC-barrel domain ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 8 169 2.2E-51 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 SUPERFAMILY SSF50447 8 95 7.06E-18 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 SUPERFAMILY SSF50346 101 170 2.88E-17 T 11-11-2016 IPR011033 PRC-barrel-like ATY42_RS06515 e342b9ba47e668f2468d689085a1e1bb 170 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 7 170 22.412 T 11-11-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ATY42_RS09510 1da9975138492f805f4f667738005c75 245 Gene3D G3DSA:3.40.50.300 4 228 2.7E-52 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09510 1da9975138492f805f4f667738005c75 245 SMART SM00382 31 216 2.0E-10 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS09510 1da9975138492f805f4f667738005c75 245 Pfam PF00005 ABC transporter 25 165 3.2E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS09510 1da9975138492f805f4f667738005c75 245 SUPERFAMILY SSF52540 6 224 9.55E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12655 657812e0b762a9525edae75ee3d43004 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.2E-28 T 11-11-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ATY42_RS12655 657812e0b762a9525edae75ee3d43004 72 Gene3D G3DSA:2.40.50.140 1 72 6.1E-40 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS12655 657812e0b762a9525edae75ee3d43004 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.0E-37 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ATY42_RS12655 657812e0b762a9525edae75ee3d43004 72 SMART SM00316 4 72 3.3E-5 T 11-11-2016 IPR022967 RNA-binding domain, S1 ATY42_RS12655 657812e0b762a9525edae75ee3d43004 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.423 T 11-11-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ATY42_RS12655 657812e0b762a9525edae75ee3d43004 72 SUPERFAMILY SSF50249 1 70 4.86E-28 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS16075 86283a1c1fb82947fd20889114cb729a 388 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS16075 86283a1c1fb82947fd20889114cb729a 388 Pfam PF16074 Type IV Pilus-assembly protein W 243 383 2.4E-22 T 11-11-2016 IPR032092 Type IV Pilus-assembly protein W GO:0043683 ATY42_RS03895 7726b6a51aa8ce1ab893bc9e263c60cd 370 Pfam PF02405 Permease MlaE 154 362 1.4E-67 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ATY42_RS03895 7726b6a51aa8ce1ab893bc9e263c60cd 370 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 130 366 1.2E-70 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ATY42_RS19915 90dce7a1326b78692f2081fed4f851fb 156 Gene3D G3DSA:2.160.20.10 16 106 1.1E-13 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS19915 90dce7a1326b78692f2081fed4f851fb 156 SUPERFAMILY SSF51126 19 122 4.32E-11 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS19915 90dce7a1326b78692f2081fed4f851fb 156 Pfam PF00295 Glycosyl hydrolases family 28 17 106 1.4E-7 T 11-11-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 ATY42_RS10190 0b9710b894ff36e18717954d7ca83fdc 204 SUPERFAMILY SSF53098 18 201 9.1E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10190 0b9710b894ff36e18717954d7ca83fdc 204 Pfam PF13546 DDE superfamily endonuclease 18 201 6.6E-65 T 11-11-2016 ATY42_RS12985 5d297e7358f4edd31afe3b32b54c2833 552 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 431 3.1E-71 T 11-11-2016 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 ATY42_RS12985 5d297e7358f4edd31afe3b32b54c2833 552 SMART SM00382 342 536 4.1E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12985 5d297e7358f4edd31afe3b32b54c2833 552 SMART SM00962 343 534 3.1E-55 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS12985 5d297e7358f4edd31afe3b32b54c2833 552 Gene3D G3DSA:3.40.50.300 342 532 5.9E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12985 5d297e7358f4edd31afe3b32b54c2833 552 SUPERFAMILY SSF52540 340 529 2.85E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12985 5d297e7358f4edd31afe3b32b54c2833 552 Pfam PF00448 SRP54-type protein, GTPase domain 345 532 5.0E-38 T 11-11-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ATY42_RS19440 3ecde2f2137152e10b07a0d77206ecd2 784 SUPERFAMILY SSF56935 61 782 4.03E-71 T 11-11-2016 ATY42_RS19440 3ecde2f2137152e10b07a0d77206ecd2 784 Gene3D G3DSA:2.170.130.10 68 197 4.0E-11 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS19440 3ecde2f2137152e10b07a0d77206ecd2 784 Gene3D G3DSA:2.40.170.20 198 782 1.0E-64 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19440 3ecde2f2137152e10b07a0d77206ecd2 784 Pfam PF07715 TonB-dependent Receptor Plug Domain 87 184 2.7E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS17980 1953bc0195e93e3e9135a0c85e546a51 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 26.258 T 11-11-2016 IPR023036 Ribosomal protein S14, bacterial/plastid ATY42_RS17980 1953bc0195e93e3e9135a0c85e546a51 101 SUPERFAMILY SSF57716 2 101 1.07E-34 T 11-11-2016 ATY42_RS17980 1953bc0195e93e3e9135a0c85e546a51 101 Gene3D G3DSA:4.10.830.10 42 101 6.5E-28 T 11-11-2016 ATY42_RS17980 1953bc0195e93e3e9135a0c85e546a51 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.6E-23 T 11-11-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS19000 b436ee0215abb42385c5fa570ba6773a 215 SUPERFAMILY SSF144064 10 181 6.28E-28 T 11-11-2016 ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 SMART SM00382 357 531 3.7E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 SMART SM00382 26 223 5.9E-8 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 Pfam PF12848 ABC transporter 217 297 1.1E-22 T 11-11-2016 IPR032781 ABC-transporter extension domain ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 SUPERFAMILY SSF52540 119 239 9.69E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 SUPERFAMILY SSF52540 2 84 9.69E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 SUPERFAMILY SSF52540 343 528 3.17E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 Gene3D G3DSA:3.40.50.300 1 266 9.8E-47 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 Gene3D G3DSA:3.40.50.300 344 551 1.9E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 Pfam PF00005 ABC transporter 17 178 1.4E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 Pfam PF00005 ABC transporter 348 479 2.3E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS06730 4110eec75328c548aa8bb038f8cea11e 638 Pfam PF16326 ABC transporter C-terminal domain 576 634 1.5E-9 T 11-11-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ATY42_RS02155 7a13eed8559a600d9f3002e055d7399d 257 SUPERFAMILY SSF53901 6 183 4.66E-10 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02155 7a13eed8559a600d9f3002e055d7399d 257 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 31 167 2.1E-22 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal ATY42_RS01470 052046eb90d4b6b8be0d7c43ccacfb82 87 Gene3D G3DSA:1.10.10.60 7 83 3.1E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01470 052046eb90d4b6b8be0d7c43ccacfb82 87 SUPERFAMILY SSF46689 2 66 3.49E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01470 052046eb90d4b6b8be0d7c43ccacfb82 87 Pfam PF01527 Transposase 2 70 2.0E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 PIRSF PIRSF000456 5 263 4.1E-98 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 7.0E-6 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 2.5E-25 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 SUPERFAMILY SSF51161 2 262 1.28E-72 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 Gene3D G3DSA:2.160.10.10 5 188 2.1E-45 T 11-11-2016 ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 Gene3D G3DSA:1.20.1180.10 198 263 4.1E-22 T 11-11-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 261 6.2E-103 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 ATY42_RS09545 1451f19060cd267e54e37a141fde75d2 263 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 263 44.959 T 11-11-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 ATY42_RS03510 0ec11769a2c25f0bb9014d29ee35eaf0 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 12.131 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ATY42_RS03510 0ec11769a2c25f0bb9014d29ee35eaf0 156 Gene3D G3DSA:1.20.5.620 63 122 5.1E-17 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain ATY42_RS03510 0ec11769a2c25f0bb9014d29ee35eaf0 156 SUPERFAMILY SSF81573 62 121 1.57E-12 T 11-11-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain ATY42_RS03510 0ec11769a2c25f0bb9014d29ee35eaf0 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 1.4E-28 T 11-11-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ATY42_RS03510 0ec11769a2c25f0bb9014d29ee35eaf0 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 1.1E-39 T 11-11-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 ATY42_RS09310 28dc40174ca6c3a155501a56cddd45b8 260 Pfam PF06966 Protein of unknown function (DUF1295) 21 250 2.9E-77 T 11-11-2016 IPR010721 Protein of unknown function DUF1295 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 SMART SM00387 292 398 5.0E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 Gene3D G3DSA:3.30.565.10 253 397 8.9E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 346 356 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 396 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 377 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 342 5.3E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 SUPERFAMILY SSF47384 170 220 8.83E-7 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 Gene3D G3DSA:3.30.450.40 40 180 2.1E-11 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 Gene3D G3DSA:1.10.287.130 181 238 7.8E-5 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 SUPERFAMILY SSF55781 40 182 2.22E-23 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 SMART SM00065 38 180 6.7E-7 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 SUPERFAMILY SSF55874 254 397 1.31E-31 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 397 7.1E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17045 7e2f2f2f0a40ddc84f4865163cb1dd51 398 Pfam PF01590 GAF domain 40 166 3.4E-5 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 1.8E-36 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 SUPERFAMILY SSF46609 2 82 9.3E-23 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 7 81 1.7E-19 T 11-11-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 SUPERFAMILY SSF54719 86 191 1.31E-40 T 11-11-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 PIRSF PIRSF000349 1 192 1.7E-71 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.0E-14 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.0E-14 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 1.0E-14 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.0E-14 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.0E-14 T 11-11-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 11-11-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS16120 86893ad42a41adba8369b5a84b00b72b 192 Gene3D G3DSA:1.10.287.990 21 81 1.6E-13 T 11-11-2016 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 33.551 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Gene3D G3DSA:3.30.980.10 66 129 1.3E-39 T 11-11-2016 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Gene3D G3DSA:3.30.980.10 188 224 1.3E-39 T 11-11-2016 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 529 7.0E-40 T 11-11-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Pfam PF02824 TGS domain 2 61 5.8E-12 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Gene3D G3DSA:3.10.20.30 1 64 2.0E-23 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 SUPERFAMILY SSF52954 530 631 1.66E-31 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 SUPERFAMILY SSF55186 63 241 1.09E-62 T 11-11-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 SUPERFAMILY SSF81271 2 61 2.35E-15 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 4.0E-215 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Gene3D G3DSA:3.40.50.800 531 632 1.8E-34 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 6.4E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 6.4E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 6.4E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 6.4E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 6.4E-51 T 11-11-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 219 2.0E-14 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Pfam PF03129 Anticodon binding domain 541 630 2.5E-21 T 11-11-2016 IPR004154 Anticodon-binding ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Gene3D G3DSA:3.30.930.10 242 530 1.0E-113 T 11-11-2016 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 SUPERFAMILY SSF55681 243 526 4.4E-94 T 11-11-2016 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 Gene3D G3DSA:3.30.54.20 130 187 6.1E-18 T 11-11-2016 ATY42_RS16015 3de935eb85a14345a2e29e3594534b99 634 SMART SM00863 170 219 1.6E-20 T 11-11-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 ATY42_RS12190 fc35f7d5cad4fce61e94dfe037e69d58 86 Pfam PF13586 Transposase DDE domain 2 82 1.8E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS05875 fc35f7d5cad4fce61e94dfe037e69d58 86 Pfam PF13586 Transposase DDE domain 2 82 1.8E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS11230 fc35f7d5cad4fce61e94dfe037e69d58 86 Pfam PF13586 Transposase DDE domain 2 82 1.8E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS00370 fc35f7d5cad4fce61e94dfe037e69d58 86 Pfam PF13586 Transposase DDE domain 2 82 1.8E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS00215 98b291734c838c151222621753d23cd1 429 Gene3D G3DSA:3.40.50.300 217 371 3.2E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00215 98b291734c838c151222621753d23cd1 429 SUPERFAMILY SSF52540 81 365 1.15E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00215 98b291734c838c151222621753d23cd1 429 SMART SM00487 24 227 8.9E-51 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS00215 98b291734c838c151222621753d23cd1 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 158 166 - T 11-11-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ATY42_RS00215 98b291734c838c151222621753d23cd1 429 Pfam PF00270 DEAD/DEAH box helicase 29 198 1.0E-42 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS00215 98b291734c838c151222621753d23cd1 429 Gene3D G3DSA:3.40.50.300 8 216 2.9E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00215 98b291734c838c151222621753d23cd1 429 SMART SM00490 263 344 2.0E-29 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS00215 98b291734c838c151222621753d23cd1 429 Pfam PF00271 Helicase conserved C-terminal domain 239 344 5.9E-26 T 11-11-2016 IPR001650 Helicase, C-terminal ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 SUPERFAMILY SSF51971 342 527 3.53E-40 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 15 337 1.4E-71 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 Gene3D G3DSA:3.50.50.60 370 473 2.8E-26 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 Gene3D G3DSA:3.50.50.60 479 632 2.8E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 405 2.9E-10 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 506 524 2.9E-10 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 625 641 2.9E-10 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 Gene3D G3DSA:3.20.20.70 12 369 7.0E-112 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 522 531 2.0E-5 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 385 407 2.0E-5 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 SUPERFAMILY SSF51395 11 371 2.62E-102 T 11-11-2016 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 384 643 7.1E-21 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 SUPERFAMILY SSF51905 469 527 1.58E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18620 c22c7f3ace69143be57388b191cf0fe2 679 SUPERFAMILY SSF51905 563 657 1.58E-19 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS07590 7c9e71f2044daed26d1d867822c1aef5 133 Gene3D G3DSA:1.20.120.550 11 125 1.5E-13 T 11-11-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain ATY42_RS07590 7c9e71f2044daed26d1d867822c1aef5 133 Pfam PF01124 MAPEG family 10 125 4.7E-21 T 11-11-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein ATY42_RS07590 7c9e71f2044daed26d1d867822c1aef5 133 SUPERFAMILY SSF161084 6 131 8.24E-27 T 11-11-2016 ATY42_RS08405 b575ddefb36ffb0e44ca02af5976f648 299 SUPERFAMILY SSF56281 1 299 1.96E-54 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS08405 b575ddefb36ffb0e44ca02af5976f648 299 TIGRFAM TIGR02108 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B 2 299 5.8E-135 T 11-11-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 ATY42_RS08405 b575ddefb36ffb0e44ca02af5976f648 299 Gene3D G3DSA:3.60.15.10 1 299 1.4E-103 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS08405 b575ddefb36ffb0e44ca02af5976f648 299 Hamap MF_00653 Coenzyme PQQ synthesis protein B [pqqB]. 1 299 144.82 T 11-11-2016 IPR011842 Coenzyme PQQ biosynthesis protein B GO:0006810|GO:0018189 ATY42_RS08405 b575ddefb36ffb0e44ca02af5976f648 299 Pfam PF12706 Beta-lactamase superfamily domain 50 265 3.9E-53 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS00965 6e1409ddec1bdf294c5d3187c561116d 717 SUPERFAMILY SSF53474 185 282 9.63E-11 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS00965 6e1409ddec1bdf294c5d3187c561116d 717 Gene3D G3DSA:3.40.50.1820 345 371 2.4E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS00965 6e1409ddec1bdf294c5d3187c561116d 717 Gene3D G3DSA:3.40.50.1820 186 279 2.4E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS00965 6e1409ddec1bdf294c5d3187c561116d 717 Pfam PF11678 Protein of unknown function (DUF3274) 399 692 1.9E-71 T 11-11-2016 IPR021692 Protein of unknown function DUF3274 ATY42_RS19120 56ef069e464921a1a5176fdbc25af47d 310 SUPERFAMILY SSF52540 19 280 2.09E-56 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19120 56ef069e464921a1a5176fdbc25af47d 310 Gene3D G3DSA:3.40.50.300 19 283 9.9E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19120 56ef069e464921a1a5176fdbc25af47d 310 Pfam PF00685 Sulfotransferase domain 27 280 5.0E-41 T 11-11-2016 IPR000863 Sulfotransferase domain GO:0008146 ATY42_RS08030 5deb589f2ca78d1b867d188b37bb4b9c 208 SUPERFAMILY SSF81452 15 206 1.31E-56 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08030 5deb589f2ca78d1b867d188b37bb4b9c 208 Gene3D G3DSA:1.20.120.80 28 206 7.5E-53 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08030 5deb589f2ca78d1b867d188b37bb4b9c 208 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 29 208 4.5E-82 T 11-11-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 ATY42_RS08030 5deb589f2ca78d1b867d188b37bb4b9c 208 Pfam PF00510 Cytochrome c oxidase subunit III 30 206 2.0E-13 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS03235 c0f961670748ba7507a1a66c433329be 314 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS03235 c0f961670748ba7507a1a66c433329be 314 Gene3D G3DSA:3.40.50.300 3 230 7.1E-67 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03235 c0f961670748ba7507a1a66c433329be 314 Pfam PF00005 ABC transporter 21 163 8.9E-34 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS03235 c0f961670748ba7507a1a66c433329be 314 SMART SM00382 30 226 2.6E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS03235 c0f961670748ba7507a1a66c433329be 314 SUPERFAMILY SSF52540 4 229 4.66E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.3E-97 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 11-11-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 11-11-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 504 3.9E-140 T 11-11-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 SUPERFAMILY SSF81442 43 559 6.67E-182 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08025 8d916ca965a149a6c5088855f1aca5ed 666 Gene3D G3DSA:1.20.210.10 38 589 3.2E-193 T 11-11-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS01420 a9d1b41e96e526a5ca3e0eae3358e943 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS01420 a9d1b41e96e526a5ca3e0eae3358e943 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01420 a9d1b41e96e526a5ca3e0eae3358e943 332 SMART SM01126 148 293 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 SUPERFAMILY SSF54826 3 138 9.93E-38 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 Pfam PF13378 Enolase C-terminal domain-like 202 415 1.7E-61 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 34 136 8.6E-7 T 11-11-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 Gene3D G3DSA:3.30.390.10 2 178 7.9E-83 T 11-11-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 SMART SM00922 199 295 2.6E-27 T 11-11-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 SUPERFAMILY SSF51604 184 431 1.14E-71 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS22775 135baf57e3e1058fe29418f99ea2de47 439 Gene3D G3DSA:3.20.20.120 182 426 2.2E-88 T 11-11-2016 IPR029065 Enolase C-terminal domain-like ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 24 108 4.1E-20 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 SUPERFAMILY SSF51445 510 587 1.37E-137 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 SUPERFAMILY SSF51445 148 481 1.37E-137 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 SUPERFAMILY SSF81296 18 161 5.04E-48 T 11-11-2016 IPR014756 Immunoglobulin E-set ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 SUPERFAMILY SSF51011 599 707 6.21E-24 T 11-11-2016 ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 Pfam PF00128 Alpha amylase, catalytic domain 201 311 2.0E-13 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 18 705 0.0 T 11-11-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 Gene3D G3DSA:2.60.40.10 18 166 3.0E-54 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 SMART SM00642 173 578 3.7E-10 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 Gene3D G3DSA:2.60.40.1180 599 707 5.1E-26 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS16765 c2e0c19abfe64415ea0e1de74a42941d 710 Gene3D G3DSA:3.20.20.80 167 587 5.0E-126 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 357 36.569 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 Pfam PF03054 tRNA methyl transferase 5 356 1.4E-125 T 11-11-2016 ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 356 5.8E-125 T 11-11-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 Gene3D G3DSA:2.40.30.10 278 359 1.5E-31 T 11-11-2016 ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 Gene3D G3DSA:3.40.50.620 2 207 1.8E-85 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 Gene3D G3DSA:2.30.30.280 209 276 1.4E-25 T 11-11-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 ATY42_RS12675 80aa4b9b87275614949b71939ca0c9ea 378 SUPERFAMILY SSF52402 4 240 8.38E-49 T 11-11-2016 ATY42_RS09800 9a93d6c20447e06b3d43421440845efd 158 SUPERFAMILY SSF117070 16 128 4.97E-6 T 11-11-2016 ATY42_RS09800 9a93d6c20447e06b3d43421440845efd 158 Pfam PF03168 Late embryogenesis abundant protein 50 141 7.7E-7 T 11-11-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 8.0E-19 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 PRINTS PR01011 Glutathione peroxidase family signature 58 74 8.0E-19 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 PRINTS PR01011 Glutathione peroxidase family signature 23 40 8.0E-19 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 Pfam PF00255 Glutathione peroxidase 5 111 5.7E-36 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 Gene3D G3DSA:3.40.30.10 4 179 1.9E-62 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 SUPERFAMILY SSF52833 3 179 1.12E-55 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS23000 3e80fedb402cf1ae87c6e442839eb1de 181 PIRSF PIRSF000303 1 180 2.9E-59 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS01510 0324d4c5352c9fe2223b5e9cd9a3caa4 460 Gene3D G3DSA:1.20.1250.20 236 437 4.5E-12 T 11-11-2016 ATY42_RS01510 0324d4c5352c9fe2223b5e9cd9a3caa4 460 Gene3D G3DSA:1.20.1250.20 28 221 8.0E-16 T 11-11-2016 ATY42_RS01510 0324d4c5352c9fe2223b5e9cd9a3caa4 460 SUPERFAMILY SSF103473 15 434 3.27E-35 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS01510 0324d4c5352c9fe2223b5e9cd9a3caa4 460 Pfam PF13347 MFS/sugar transport protein 21 439 1.1E-95 T 11-11-2016 ATY42_RS01510 0324d4c5352c9fe2223b5e9cd9a3caa4 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 19 452 6.4E-116 T 11-11-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 ATY42_RS13905 a4b18a47627d706538a036555c10c71d 281 Pfam PF13006 Insertion element 4 transposase N-terminal 12 103 1.0E-30 T 11-11-2016 IPR024473 Transposase, IS4, N-terminal ATY42_RS13905 a4b18a47627d706538a036555c10c71d 281 Pfam PF01609 Transposase DDE domain 124 263 1.3E-6 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS13905 a4b18a47627d706538a036555c10c71d 281 SUPERFAMILY SSF53098 107 238 7.59E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-11-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 1.7E-32 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.3E-26 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 SUPERFAMILY SSF55594 1 88 8.11E-27 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 Gene3D G3DSA:3.30.1340.10 1 87 8.3E-30 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-11-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.0E-16 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.0E-16 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS06270 dd2a7718a9f80df40c4320c4ec3f555e 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.0E-16 T 11-11-2016 IPR000032 Phosphocarrier protein HPr-like ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 Pfam PF00263 Bacterial type II and III secretion system protein 446 603 1.5E-39 T 11-11-2016 IPR004846 Type II/III secretion system GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 TIGRFAM TIGR02516 type_III_yscC: type III secretion outer membrane pore, YscC/HrcC family 321 604 5.3E-107 T 11-11-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 459 478 2.8E-26 T 11-11-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 198 215 2.8E-26 T 11-11-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 493 508 2.8E-26 T 11-11-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 368 388 2.8E-26 T 11-11-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 PRINTS PR01337 Type III secretion system outer membrane G protein family signature 582 601 2.8E-26 T 11-11-2016 IPR003522 Type III secretion system outer membrane pore YscC/HrcC GO:0009306 ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 Pfam PF03958 Bacterial type II/III secretion system short domain 186 365 6.3E-17 T 11-11-2016 IPR005644 NolW-like ATY42_RS00420 bc0af04f55a9fc3c2bcaf3c41e8231e7 605 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 549 582 - T 11-11-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 ATY42_RS18745 7c1117de18a0c5eafb092787365bde92 347 Pfam PF01728 FtsJ-like methyltransferase 182 274 1.7E-7 T 11-11-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ATY42_RS18745 7c1117de18a0c5eafb092787365bde92 347 Gene3D G3DSA:3.40.50.150 180 284 6.0E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS18745 7c1117de18a0c5eafb092787365bde92 347 SUPERFAMILY SSF53335 181 291 4.14E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS18745 7c1117de18a0c5eafb092787365bde92 347 PIRSF PIRSF028774 1 347 1.8E-161 T 11-11-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 ATY42_RS18745 7c1117de18a0c5eafb092787365bde92 347 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 347 77.764 T 11-11-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 ATY42_RS19630 94e89a5b52a04b9f26d64f68c230a2a1 158 Pfam PF01609 Transposase DDE domain 1 155 6.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20655 94e89a5b52a04b9f26d64f68c230a2a1 158 Pfam PF01609 Transposase DDE domain 1 155 6.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS03075 94e89a5b52a04b9f26d64f68c230a2a1 158 Pfam PF01609 Transposase DDE domain 1 155 6.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15615 94e89a5b52a04b9f26d64f68c230a2a1 158 Pfam PF01609 Transposase DDE domain 1 155 6.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21030 94e89a5b52a04b9f26d64f68c230a2a1 158 Pfam PF01609 Transposase DDE domain 1 155 6.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10215 94e89a5b52a04b9f26d64f68c230a2a1 158 Pfam PF01609 Transposase DDE domain 1 155 6.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS01550 9234cc9d115644a3b6b44be705f04d08 119 Pfam PF05336 Domain of unknown function (DUF718) 3 110 3.9E-25 T 11-11-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 ATY42_RS01550 9234cc9d115644a3b6b44be705f04d08 119 SUPERFAMILY SSF54909 1 111 1.02E-23 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS18460 e54468344fe7cb5dbf396dc13df110e8 568 Gene3D G3DSA:1.25.40.10 383 529 6.6E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18460 e54468344fe7cb5dbf396dc13df110e8 568 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 21 558 37.724 T 11-11-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 ATY42_RS18460 e54468344fe7cb5dbf396dc13df110e8 568 Pfam PF01435 Peptidase family M48 86 280 1.8E-38 T 11-11-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ATY42_RS18460 e54468344fe7cb5dbf396dc13df110e8 568 SUPERFAMILY SSF48452 358 447 4.37E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18460 e54468344fe7cb5dbf396dc13df110e8 568 Gene3D G3DSA:3.30.2010.10 81 162 4.3E-19 T 11-11-2016 ATY42_RS03890 5361bca70ca63858abfae23a77043a34 280 Gene3D G3DSA:3.40.50.300 16 250 4.1E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03890 5361bca70ca63858abfae23a77043a34 280 SUPERFAMILY SSF52540 24 250 4.95E-59 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03890 5361bca70ca63858abfae23a77043a34 280 Pfam PF00005 ABC transporter 41 190 3.7E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS03890 5361bca70ca63858abfae23a77043a34 280 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS03890 5361bca70ca63858abfae23a77043a34 280 SMART SM00382 48 238 3.3E-15 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 Pfam PF03466 LysR substrate binding domain 88 289 5.7E-45 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 Gene3D G3DSA:3.40.190.10 175 257 2.5E-23 T 11-11-2016 ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 Gene3D G3DSA:3.40.190.10 91 174 1.3E-16 T 11-11-2016 ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.1E-20 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 Gene3D G3DSA:1.10.10.10 1 85 1.8E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 SUPERFAMILY SSF46785 1 111 2.73E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 SUPERFAMILY SSF53850 90 291 8.69E-45 T 11-11-2016 ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.5E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.5E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS04500 aba6a4e58b51b51fff57e1e731379596 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.5E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS19570 a46800d77009c9776eefbe6024b241b5 271 Pfam PF01323 DSBA-like thioredoxin domain 149 255 1.4E-8 T 11-11-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 ATY42_RS19570 a46800d77009c9776eefbe6024b241b5 271 SUPERFAMILY SSF52833 81 261 2.72E-36 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS19570 a46800d77009c9776eefbe6024b241b5 271 Gene3D G3DSA:3.40.30.10 81 263 6.2E-51 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16905 64481267c6d9ed13a221f797bffea237 227 Pfam PF05598 Transposase domain (DUF772) 59 132 1.6E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS14990 691d38c2ef4c33eed532d728f40e5048 143 Pfam PF05523 WxcM-like, C-terminal 2 130 4.9E-47 T 11-11-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 ATY42_RS14990 691d38c2ef4c33eed532d728f40e5048 143 SUPERFAMILY SSF51182 4 127 2.2E-38 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS14040 3c5c4d4a076b6c8e67902510a9604c8e 319 Pfam PF13546 DDE superfamily endonuclease 19 278 1.1E-85 T 11-11-2016 ATY42_RS14040 3c5c4d4a076b6c8e67902510a9604c8e 319 SUPERFAMILY SSF53098 21 295 1.29E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 SUPERFAMILY SSF47973 3 148 4.58E-57 T 11-11-2016 IPR023798 Ribosomal protein S7 domain ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 35.348 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.6E-64 T 11-11-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 Pfam PF00177 Ribosomal protein S7p/S5e 1 148 3.3E-64 T 11-11-2016 IPR023798 Ribosomal protein S7 domain ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 Gene3D G3DSA:1.10.455.10 8 155 9.5E-64 T 11-11-2016 IPR023798 Ribosomal protein S7 domain ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-11-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS18065 8ac5d0620ba67088132e5fbfe50e6cec 155 PIRSF PIRSF002122 2 155 2.6E-60 T 11-11-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 ATY42_RS01300 ca9936c015bb7faac3392a0222e5975f 70 Pfam PF03594 Benzoate membrane transport protein 1 60 1.9E-18 T 11-11-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ATY42_RS02130 725970cb2a2505ee67f41f9d0457e58a 324 SUPERFAMILY SSF46689 20 138 4.12E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02130 725970cb2a2505ee67f41f9d0457e58a 324 Pfam PF13592 Winged helix-turn helix 104 162 2.7E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS02130 725970cb2a2505ee67f41f9d0457e58a 324 Pfam PF13551 Winged helix-turn helix 27 86 1.0E-14 T 11-11-2016 ATY42_RS02130 725970cb2a2505ee67f41f9d0457e58a 324 Pfam PF13358 DDE superfamily endonuclease 180 302 1.6E-26 T 11-11-2016 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 Gene3D G3DSA:1.10.10.10 5 64 4.4E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 Pfam PF07702 UTRA domain 89 228 3.1E-28 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.6E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.6E-9 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 SUPERFAMILY SSF46785 3 72 2.82E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 SMART SM00345 9 68 8.2E-17 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 SMART SM00866 89 229 2.1E-32 T 11-11-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 SUPERFAMILY SSF64288 56 233 1.73E-37 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 1.5E-17 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS04140 ef0041dcb666662232eca318ff4654f1 242 Gene3D G3DSA:3.40.1410.10 65 232 4.1E-36 T 11-11-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain ATY42_RS15995 1f859a3333b2687a2ac4c62faa320f08 331 SUPERFAMILY SSF46589 12 99 1.62E-20 T 11-11-2016 IPR010978 tRNA-binding arm GO:0000166 ATY42_RS15995 1f859a3333b2687a2ac4c62faa320f08 331 Pfam PF01409 tRNA synthetases class II core domain (F) 92 330 2.4E-104 T 11-11-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ATY42_RS15995 1f859a3333b2687a2ac4c62faa320f08 331 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 330 48.519 T 11-11-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ATY42_RS15995 1f859a3333b2687a2ac4c62faa320f08 331 SUPERFAMILY SSF55681 92 330 2.84E-78 T 11-11-2016 ATY42_RS15995 1f859a3333b2687a2ac4c62faa320f08 331 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 8.4E-23 T 11-11-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ATY42_RS15995 1f859a3333b2687a2ac4c62faa320f08 331 Gene3D G3DSA:3.30.930.10 9 330 1.3E-128 T 11-11-2016 ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 TIGRFAM TIGR01814 kynureninase: kynureninase 11 421 4.2E-152 T 11-11-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 Hamap MF_01970 Kynureninase [kynU]. 1 421 45.455 T 11-11-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 Gene3D G3DSA:3.40.640.10 77 267 4.6E-19 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 PIRSF PIRSF038800 2 422 7.2E-155 T 11-11-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 Gene3D G3DSA:3.90.1150.10 273 420 2.8E-51 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 Pfam PF00266 Aminotransferase class-V 80 354 2.0E-11 T 11-11-2016 IPR000192 Aminotransferase class V domain ATY42_RS12050 9a6ffee822be718866833f1a7a346e4f 423 SUPERFAMILY SSF53383 8 419 6.67E-75 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS22650 fda1dff4c47fb672427a6a5f4c0a2b95 427 Pfam PF03781 Sulfatase-modifying factor enzyme 1 205 339 4.1E-22 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS22650 fda1dff4c47fb672427a6a5f4c0a2b95 427 Pfam PF03781 Sulfatase-modifying factor enzyme 1 344 424 8.1E-7 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS22650 fda1dff4c47fb672427a6a5f4c0a2b95 427 Gene3D G3DSA:3.90.1580.10 196 426 6.0E-53 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS22650 fda1dff4c47fb672427a6a5f4c0a2b95 427 SUPERFAMILY SSF56436 189 426 8.1E-62 T 11-11-2016 IPR016187 C-type lectin fold ATY42_RS22650 fda1dff4c47fb672427a6a5f4c0a2b95 427 Pfam PF12867 DinB superfamily 22 152 7.3E-6 T 11-11-2016 IPR024775 DinB-like domain ATY42_RS22650 fda1dff4c47fb672427a6a5f4c0a2b95 427 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 18 423 1.5E-163 T 11-11-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 ATY42_RS01140 ac1b6e25600b58a8940cd2892992bbff 87 SUPERFAMILY SSF46689 2 66 6.9E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01140 ac1b6e25600b58a8940cd2892992bbff 87 Pfam PF01527 Transposase 2 70 2.1E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS01140 ac1b6e25600b58a8940cd2892992bbff 87 Gene3D G3DSA:1.10.10.60 7 83 2.6E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08080 ac1b6e25600b58a8940cd2892992bbff 87 SUPERFAMILY SSF46689 2 66 6.9E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08080 ac1b6e25600b58a8940cd2892992bbff 87 Pfam PF01527 Transposase 2 70 2.1E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS08080 ac1b6e25600b58a8940cd2892992bbff 87 Gene3D G3DSA:1.10.10.60 7 83 2.6E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01395 169e6cae9ede1fb8bb49ab5a5968776c 183 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 7 150 1.5E-48 T 11-11-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 ATY42_RS01395 169e6cae9ede1fb8bb49ab5a5968776c 183 Pfam PF02470 MlaD protein 41 119 3.4E-20 T 11-11-2016 IPR003399 Mce/MlaD ATY42_RS06775 7e7e2ef50d666e99b6f93845a356fe01 263 Gene3D G3DSA:1.10.10.10 135 235 1.6E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS06775 7e7e2ef50d666e99b6f93845a356fe01 263 Gene3D G3DSA:3.40.50.2300 33 126 5.7E-6 T 11-11-2016 ATY42_RS06775 7e7e2ef50d666e99b6f93845a356fe01 263 SUPERFAMILY SSF52172 33 178 4.39E-8 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS06775 7e7e2ef50d666e99b6f93845a356fe01 263 SMART SM00862 157 234 1.9E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS06775 7e7e2ef50d666e99b6f93845a356fe01 263 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 234 1.3E-18 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS06775 7e7e2ef50d666e99b6f93845a356fe01 263 SUPERFAMILY SSF46894 135 235 8.5E-23 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS15535 7f1555c153f6d221fe63ca99ce396cdd 83 SUPERFAMILY SSF52172 1 76 5.47E-19 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS15535 7f1555c153f6d221fe63ca99ce396cdd 83 Pfam PF03861 ANTAR domain 24 76 4.2E-20 T 11-11-2016 IPR005561 ANTAR domain GO:0003723 ATY42_RS15535 7f1555c153f6d221fe63ca99ce396cdd 83 SMART SM01012 21 76 6.2E-23 T 11-11-2016 IPR005561 ANTAR domain GO:0003723 ATY42_RS15535 7f1555c153f6d221fe63ca99ce396cdd 83 Gene3D G3DSA:1.10.10.10 24 82 2.3E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 39.529 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 Pfam PF03462 PCRF domain 13 203 1.8E-70 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 SUPERFAMILY SSF75620 12 354 1.12E-129 T 11-11-2016 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 Gene3D G3DSA:1.20.58.410 8 93 9.9E-16 T 11-11-2016 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 SMART SM00937 63 178 4.1E-63 T 11-11-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 3 358 5.9E-154 T 11-11-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 Gene3D G3DSA:3.30.160.20 213 287 2.9E-34 T 11-11-2016 IPR014720 Double-stranded RNA-binding domain ATY42_RS18185 10ef5f54cc8c48955e2335bec0d81427 361 Pfam PF00472 RF-1 domain 213 321 1.4E-42 T 11-11-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ATY42_RS21830 d677b876c99333e9c77d1d689f1a204f 372 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 344 3.2E-64 T 11-11-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ATY42_RS21830 d677b876c99333e9c77d1d689f1a204f 372 Gene3D G3DSA:3.20.20.70 5 362 1.7E-120 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS21830 d677b876c99333e9c77d1d689f1a204f 372 SUPERFAMILY SSF51395 5 365 2.11E-109 T 11-11-2016 ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 SUPERFAMILY SSF53335 124 295 1.09E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 SUPERFAMILY SSF46785 1 82 4.4E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 Gene3D G3DSA:1.10.10.10 1 77 1.8E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 Gene3D G3DSA:3.40.50.150 114 308 2.3E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.2E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.2E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.2E-11 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 Pfam PF08241 Methyltransferase domain 152 245 2.6E-24 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 6.5E-15 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATY42_RS10090 2bce9f938ba27fd099add9674119ccce 331 SMART SM00418 8 88 4.5E-19 T 11-11-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ATY42_RS16665 30da6d9354b9074c923edc87f57731e5 299 SUPERFAMILY SSF52374 82 294 7.41E-46 T 11-11-2016 ATY42_RS16665 30da6d9354b9074c923edc87f57731e5 299 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 83 139 2.5E-8 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATY42_RS16665 30da6d9354b9074c923edc87f57731e5 299 Pfam PF01467 Cytidylyltransferase-like 83 266 5.2E-25 T 11-11-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ATY42_RS16665 30da6d9354b9074c923edc87f57731e5 299 Gene3D G3DSA:3.40.50.620 82 294 1.5E-56 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS16665 30da6d9354b9074c923edc87f57731e5 299 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 79 293 26.822 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 ATY42_RS16665 30da6d9354b9074c923edc87f57731e5 299 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 84 292 5.9E-44 T 11-11-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 PIRSF PIRSF038925 9 369 3.3E-115 T 11-11-2016 IPR026287 Adenosine monophosphate-protein transferase ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 Gene3D G3DSA:1.10.3290.10 39 292 2.0E-49 T 11-11-2016 IPR003812 Fido domain ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 SUPERFAMILY SSF46785 306 356 1.05E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 Pfam PF02661 Fic/DOC family 148 222 7.3E-16 T 11-11-2016 IPR003812 Fido domain ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 Pfam PF13784 Fic/DOC family N-terminal 36 117 7.6E-25 T 11-11-2016 IPR025758 Fic/DOC N-terminal ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 SUPERFAMILY SSF140931 162 285 2.22E-30 T 11-11-2016 IPR003812 Fido domain ATY42_RS21200 575a554c17a4b259c1ac7c1c41cfeffc 387 Gene3D G3DSA:1.10.10.10 305 357 1.1E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS16060 160aeae8187b0bf70cb4f1e4b3c60821 126 SUPERFAMILY SSF54523 1 117 1.88E-26 T 11-11-2016 ATY42_RS16060 160aeae8187b0bf70cb4f1e4b3c60821 126 Gene3D G3DSA:3.30.700.10 1 109 1.2E-17 T 11-11-2016 ATY42_RS16060 160aeae8187b0bf70cb4f1e4b3c60821 126 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 1 19 1.5E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS16060 160aeae8187b0bf70cb4f1e4b3c60821 126 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 20 108 2.2E-25 T 11-11-2016 IPR031982 Type IV minor pilin ComP ATY42_RS05675 0d6916a9562c9752c04d57f3300bfa3a 411 Pfam PF01610 Transposase 155 390 1.6E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS05675 0d6916a9562c9752c04d57f3300bfa3a 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 Pfam PF00245 Alkaline phosphatase 71 533 7.6E-122 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 Gene3D G3DSA:3.40.720.10 60 534 1.8E-151 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 SMART SM00098 72 538 2.1E-146 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 PRINTS PR00113 Alkaline phosphatase signature 173 193 2.6E-41 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 PRINTS PR00113 Alkaline phosphatase signature 324 353 2.6E-41 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 PRINTS PR00113 Alkaline phosphatase signature 71 91 2.6E-41 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 PRINTS PR00113 Alkaline phosphatase signature 127 142 2.6E-41 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 PRINTS PR00113 Alkaline phosphatase signature 236 246 2.6E-41 T 11-11-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ATY42_RS16545 5bfc743789bd451bf1b49fb9bbdbacd4 568 SUPERFAMILY SSF53649 65 534 2.04E-138 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ATY42_RS07945 88ba42165fd7f00c3ad26721efca2075 301 SUPERFAMILY SSF54637 120 287 1.39E-54 T 11-11-2016 IPR029069 HotDog domain ATY42_RS07945 88ba42165fd7f00c3ad26721efca2075 301 Gene3D G3DSA:3.10.129.10 128 288 6.6E-56 T 11-11-2016 IPR029069 HotDog domain ATY42_RS07945 88ba42165fd7f00c3ad26721efca2075 301 SUPERFAMILY SSF54637 8 118 2.46E-37 T 11-11-2016 IPR029069 HotDog domain ATY42_RS07945 88ba42165fd7f00c3ad26721efca2075 301 Gene3D G3DSA:3.10.129.10 11 119 1.1E-44 T 11-11-2016 IPR029069 HotDog domain ATY42_RS07945 88ba42165fd7f00c3ad26721efca2075 301 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 16 287 3.8E-89 T 11-11-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-75105 ATY42_RS07945 88ba42165fd7f00c3ad26721efca2075 301 Pfam PF13622 Thioesterase-like superfamily 31 286 5.4E-59 T 11-11-2016 ATY42_RS10465 4ea8b43dc1d975fe486769b166737477 156 Pfam PF03100 CcmE 5 130 8.2E-43 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 ATY42_RS10465 4ea8b43dc1d975fe486769b166737477 156 Gene3D G3DSA:2.40.50.140 28 124 4.9E-35 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS10465 4ea8b43dc1d975fe486769b166737477 156 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 140 31.364 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 ATY42_RS10465 4ea8b43dc1d975fe486769b166737477 156 SUPERFAMILY SSF82093 30 136 6.93E-38 T 11-11-2016 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 ATY42_RS03865 a05a4f8f92884ee98deabd04b4d48176 695 Pfam PF05045 Rhamnan synthesis protein F 443 666 2.1E-33 T 11-11-2016 IPR007739 Rhamnan synthesis F ATY42_RS03865 a05a4f8f92884ee98deabd04b4d48176 695 Pfam PF14307 Glycosyltransferase WbsX 92 428 1.4E-127 T 11-11-2016 IPR032719 Glycosyltransferase WbsX ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 Gene3D G3DSA:1.10.1060.10 19 128 1.2E-20 T 11-11-2016 ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 SUPERFAMILY SSF54862 36 145 8.37E-25 T 11-11-2016 ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 26.536 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 6.0E-12 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATY42_RS16215 b52953b048787e908193a70bb05b9ec2 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 139 3.2E-44 T 11-11-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16850 042677665874105e8fd924685653129c 164 Gene3D G3DSA:1.10.443.10 5 158 6.7E-22 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS16850 042677665874105e8fd924685653129c 164 Pfam PF00589 Phage integrase family 22 155 4.2E-9 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS16850 042677665874105e8fd924685653129c 164 SUPERFAMILY SSF56349 12 154 7.06E-20 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 Gene3D G3DSA:1.20.140.10 226 388 5.1E-69 T 11-11-2016 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 Gene3D G3DSA:2.40.110.10 130 225 3.2E-41 T 11-11-2016 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 Gene3D G3DSA:1.10.540.10 8 125 2.2E-37 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 SUPERFAMILY SSF56645 12 249 3.93E-80 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 132 144 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 130 224 8.4E-26 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 386 2.5E-49 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 SUPERFAMILY SSF47203 234 388 5.32E-60 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 125 1.5E-29 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS08930 12c0c193074102b924dc5d6f7a839548 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 344 363 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS04425 6a40f1321e2564a917334f050744d4ba 458 Pfam PF05598 Transposase domain (DUF772) 59 132 5.5E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS04425 6a40f1321e2564a917334f050744d4ba 458 Pfam PF01609 Transposase DDE domain 283 416 1.2E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 Gene3D G3DSA:3.40.390.10 470 685 1.2E-108 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 Gene3D G3DSA:3.40.390.10 309 430 1.2E-108 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 SUPERFAMILY SSF55486 44 685 1.9E-205 T 11-11-2016 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 510 526 3.2E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 471 483 3.2E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 489 501 3.2E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 581 592 3.2E-22 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 Pfam PF05649 Peptidase family M13 52 427 4.8E-93 T 11-11-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ATY42_RS07235 bf77dda64f489cb7faaf243e9bd706bc 685 Pfam PF01431 Peptidase family M13 479 682 3.7E-71 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 Pfam PF00117 Glutamine amidotransferase class-I 5 191 1.7E-54 T 11-11-2016 IPR017926 Glutamine amidotransferase ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 Gene3D G3DSA:3.40.50.880 1 192 2.6E-66 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 170 183 7.5E-14 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 7.5E-14 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 7.5E-14 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 SUPERFAMILY SSF52317 1 192 1.74E-54 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 4.5E-5 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 4.5E-5 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 193 2.6E-79 T 11-11-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00097 Anthranilate synthase component II signature 75 86 3.0E-36 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00097 Anthranilate synthase component II signature 48 57 3.0E-36 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00097 Anthranilate synthase component II signature 100 108 3.0E-36 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00097 Anthranilate synthase component II signature 170 183 3.0E-36 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00097 Anthranilate synthase component II signature 120 132 3.0E-36 T 11-11-2016 ATY42_RS20975 0b56cb0fd420d651c9fd696d4a4a0375 193 PRINTS PR00097 Anthranilate synthase component II signature 3 17 3.0E-36 T 11-11-2016 ATY42_RS22465 fba407024d162f367070ee722f673e5f 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 8.7E-22 T 11-11-2016 IPR007711 Toxin HigB-1 ATY42_RS22465 fba407024d162f367070ee722f673e5f 93 SUPERFAMILY SSF143011 16 93 3.79E-17 T 11-11-2016 ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SUPERFAMILY SSF51126 44 339 3.29E-36 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 Gene3D G3DSA:2.160.20.10 44 111 1.7E-20 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 Gene3D G3DSA:2.160.20.10 146 328 1.7E-20 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 229 263 5.9E-7 T 11-11-2016 IPR022441 Parallel beta-helix repeat-2 ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 Pfam PF13229 Right handed beta helix region 150 304 2.7E-18 T 11-11-2016 ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00722 155 270 5.1E-4 T 11-11-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00710 203 225 620.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00710 226 248 14.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00710 249 271 61.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00710 288 311 1600.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00710 120 163 6400.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat ATY42_RS09680 a46245c284e773c4306f068001a7a794 350 SMART SM00710 180 202 59.0 T 11-11-2016 IPR006626 Parallel beta-helix repeat ATY42_RS10530 7e059b6ccae09ae43fac0b339b01616b 99 Gene3D G3DSA:3.30.70.1060 2 97 1.7E-31 T 11-11-2016 ATY42_RS10530 7e059b6ccae09ae43fac0b339b01616b 99 Pfam PF03795 YCII-related domain 2 95 1.1E-22 T 11-11-2016 IPR005545 YCII-related ATY42_RS10530 7e059b6ccae09ae43fac0b339b01616b 99 SUPERFAMILY SSF54909 2 97 2.86E-28 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS03875 2ea287299c6490117ed751828f8b359c 202 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 15 190 6.6E-37 T 11-11-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ATY42_RS03875 2ea287299c6490117ed751828f8b359c 202 SUPERFAMILY SSF51197 5 192 1.79E-61 T 11-11-2016 ATY42_RS03875 2ea287299c6490117ed751828f8b359c 202 Gene3D G3DSA:2.60.120.590 14 193 3.6E-42 T 11-11-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like ATY42_RS12850 b4044c676b1e51360a07688653c957ca 346 Gene3D G3DSA:3.40.47.10 5 162 1.6E-27 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12850 b4044c676b1e51360a07688653c957ca 346 SUPERFAMILY SSF53901 5 333 1.87E-39 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12850 b4044c676b1e51360a07688653c957ca 346 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 248 334 4.3E-26 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS12850 b4044c676b1e51360a07688653c957ca 346 Gene3D G3DSA:3.40.47.10 222 337 1.2E-40 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12850 b4044c676b1e51360a07688653c957ca 346 Gene3D G3DSA:3.40.47.10 163 184 1.2E-40 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS12850 b4044c676b1e51360a07688653c957ca 346 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 114 184 1.5E-4 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS13750 a68e1afd77631198d608aa40506f3212 454 Gene3D G3DSA:3.40.605.10 3 241 3.5E-72 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS13750 a68e1afd77631198d608aa40506f3212 454 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ATY42_RS13750 a68e1afd77631198d608aa40506f3212 454 Gene3D G3DSA:3.40.309.10 242 426 1.3E-60 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS13750 a68e1afd77631198d608aa40506f3212 454 SUPERFAMILY SSF53720 3 453 5.37E-138 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS13750 a68e1afd77631198d608aa40506f3212 454 Pfam PF00171 Aldehyde dehydrogenase family 3 451 1.5E-137 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 20 965 0.0 T 11-11-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 SUPERFAMILY SSF53383 470 901 3.75E-99 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 SUPERFAMILY SSF53383 944 966 3.75E-99 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 Pfam PF02347 Glycine cleavage system P-protein 19 440 1.7E-176 T 11-11-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 Pfam PF02347 Glycine cleavage system P-protein 446 728 3.3E-12 T 11-11-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 Gene3D G3DSA:3.40.640.10 497 734 1.0E-40 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 Gene3D G3DSA:3.40.640.10 90 306 5.2E-14 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 SUPERFAMILY SSF53383 20 439 5.01E-102 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS17860 1dd9ce29fe2165cd66261fb6db99cc55 984 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 11 971 25.722 T 11-11-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ATY42_RS08495 c34f57cc373af430294609ae7a0557e2 207 Gene3D G3DSA:3.40.630.30 12 182 2.4E-39 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS08495 c34f57cc373af430294609ae7a0557e2 207 SUPERFAMILY SSF55729 12 181 2.13E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS08495 c34f57cc373af430294609ae7a0557e2 207 Pfam PF13302 Acetyltransferase (GNAT) domain 71 157 5.4E-15 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS08810 206a01e323f2e7f11461670dfcdf19d4 214 Pfam PF03006 Haemolysin-III related 12 206 1.7E-36 T 11-11-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ATY42_RS08810 206a01e323f2e7f11461670dfcdf19d4 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 211 8.2E-63 T 11-11-2016 IPR005744 Hly-III GO:0016021|GO:0019835 ATY42_RS19305 9b03df610819afa549c82a25d9f3a6ac 73 Pfam PF07362 Post-segregation antitoxin CcdA 11 72 4.0E-13 T 11-11-2016 IPR009956 Post-segregation antitoxin CcdA ATY42_RS10415 f62f1696b067d3cea52b8bbb11cd23bc 182 Gene3D G3DSA:3.90.79.10 46 181 2.3E-14 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS10415 f62f1696b067d3cea52b8bbb11cd23bc 182 Pfam PF00293 NUDIX domain 55 164 4.3E-6 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS10415 f62f1696b067d3cea52b8bbb11cd23bc 182 SUPERFAMILY SSF55811 47 179 2.03E-14 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS10365 8cbb34c0956c796ce6f14d509f953cac 1375 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 642 843 2.9E-132 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS10365 8cbb34c0956c796ce6f14d509f953cac 1375 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 845 1046 2.1E-131 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS10365 8cbb34c0956c796ce6f14d509f953cac 1375 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 302 504 1.6E-132 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 SUPERFAMILY SSF54862 450 548 2.2E-24 T 11-11-2016 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 Gene3D G3DSA:3.50.50.60 19 288 8.1E-41 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 Pfam PF01946 Thi4 family 17 64 8.1E-7 T 11-11-2016 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 SUPERFAMILY SSF54373 218 311 4.32E-30 T 11-11-2016 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 Gene3D G3DSA:3.30.70.20 471 537 1.4E-5 T 11-11-2016 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 SUPERFAMILY SSF51905 313 421 1.33E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 SUPERFAMILY SSF51905 18 217 1.33E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03870 d2f4d410a3f15fe745fb7f936dd729d6 549 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 447 547 2.0E-43 T 11-11-2016 IPR007859 ETF-QO/FixX GO:0051536|GO:0055114 Reactome: R-HSA-611105 ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 Pfam PF00270 DEAD/DEAH box helicase 37 89 1.3E-4 T 11-11-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 100 114 5.91E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 593 615 5.91E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 189 235 5.91E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 383 562 5.91E-5 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 Gene3D G3DSA:3.40.50.300 26 123 3.9E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 Gene3D G3DSA:3.40.50.300 195 243 3.9E-20 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 582 620 7.48E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 192 249 7.48E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SUPERFAMILY SSF52540 19 115 7.48E-23 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 Pfam PF13307 Helicase C-terminal domain 480 636 8.3E-35 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ATY42_RS08435 327d020de3ebc2fee992fedc9b76aca9 675 SMART SM00491 495 623 1.3E-36 T 11-11-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ATY42_RS08085 949a22d91b90ef7c6ee9203bb55856e7 281 SUPERFAMILY SSF53098 108 268 9.99E-37 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08085 949a22d91b90ef7c6ee9203bb55856e7 281 Pfam PF13276 HTH-like domain 47 98 1.4E-7 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS08085 949a22d91b90ef7c6ee9203bb55856e7 281 Gene3D G3DSA:3.30.420.10 109 265 1.9E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08085 949a22d91b90ef7c6ee9203bb55856e7 281 Pfam PF13683 Integrase core domain 198 264 4.9E-28 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS01545 d84cf89ab5162ac18304d8b6dd2fae5a 433 Gene3D G3DSA:1.20.1250.20 22 227 1.4E-17 T 11-11-2016 ATY42_RS01545 d84cf89ab5162ac18304d8b6dd2fae5a 433 Gene3D G3DSA:1.20.1250.20 245 428 2.1E-10 T 11-11-2016 ATY42_RS01545 d84cf89ab5162ac18304d8b6dd2fae5a 433 SUPERFAMILY SSF103473 12 425 2.35E-40 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS01545 d84cf89ab5162ac18304d8b6dd2fae5a 433 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 19 422 2.8E-134 T 11-11-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 ATY42_RS01545 d84cf89ab5162ac18304d8b6dd2fae5a 433 Pfam PF07690 Major Facilitator Superfamily 28 379 8.0E-21 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS01965 0a3b150b8218c5100b2c05bbb222dc27 242 Pfam PF03309 Type III pantothenate kinase 5 192 5.5E-36 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ATY42_RS01965 0a3b150b8218c5100b2c05bbb222dc27 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 2 240 14.443 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ATY42_RS01965 0a3b150b8218c5100b2c05bbb222dc27 242 SUPERFAMILY SSF53067 113 236 1.34E-22 T 11-11-2016 ATY42_RS01965 0a3b150b8218c5100b2c05bbb222dc27 242 Gene3D G3DSA:3.30.420.40 86 238 1.1E-31 T 11-11-2016 ATY42_RS01965 0a3b150b8218c5100b2c05bbb222dc27 242 SUPERFAMILY SSF53067 5 110 8.42E-20 T 11-11-2016 ATY42_RS01965 0a3b150b8218c5100b2c05bbb222dc27 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 234 1.8E-21 T 11-11-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ATY42_RS15050 017525b9a488f1853d37eec01cd3f0f9 180 Gene3D G3DSA:3.40.30.10 10 174 2.3E-39 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS15050 017525b9a488f1853d37eec01cd3f0f9 180 SUPERFAMILY SSF52833 33 178 4.71E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS15050 017525b9a488f1853d37eec01cd3f0f9 180 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 4 172 1.3E-48 T 11-11-2016 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 ATY42_RS15050 017525b9a488f1853d37eec01cd3f0f9 180 Pfam PF08534 Redoxin 38 162 1.7E-16 T 11-11-2016 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 PIRSF PIRSF004749 1 165 9.7E-42 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 SUPERFAMILY SSF56420 1 164 2.75E-52 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 1.5E-32 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 PRINTS PR01576 Peptide deformylase signature 33 62 2.5E-28 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 PRINTS PR01576 Peptide deformylase signature 128 157 2.5E-28 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 PRINTS PR01576 Peptide deformylase signature 109 127 2.5E-28 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 PRINTS PR01576 Peptide deformylase signature 97 108 2.5E-28 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 Pfam PF01327 Polypeptide deformylase 3 157 7.4E-43 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 Hamap MF_00163 Peptide deformylase [def]. 1 170 24.42 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS05195 38565aeb5ed18ecb9633ebd41e057ce2 171 Gene3D G3DSA:3.90.45.10 1 160 1.9E-49 T 11-11-2016 IPR023635 Peptide deformylase ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 47.878 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 Pfam PF00266 Aminotransferase class-V 5 347 1.0E-47 T 11-11-2016 IPR000192 Aminotransferase class V domain ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 PIRSF PIRSF000525 1 361 4.3E-138 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 Gene3D G3DSA:3.90.1150.10 258 360 1.7E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 360 1.0E-147 T 11-11-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 Gene3D G3DSA:3.40.640.10 17 257 4.9E-92 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS11855 32dbe158c86a28af7578806a899ece05 361 SUPERFAMILY SSF53383 1 359 1.88E-105 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS18325 792dd8c0eb25e11fd1f7f76252cfb4a7 191 Pfam PF00881 Nitroreductase family 12 168 1.5E-20 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 ATY42_RS18325 792dd8c0eb25e11fd1f7f76252cfb4a7 191 PIRSF PIRSF000232 1 191 1.2E-60 T 11-11-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ATY42_RS18325 792dd8c0eb25e11fd1f7f76252cfb4a7 191 SUPERFAMILY SSF55469 7 186 3.53E-30 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ATY42_RS18325 792dd8c0eb25e11fd1f7f76252cfb4a7 191 Gene3D G3DSA:3.40.109.10 7 186 8.8E-33 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ATY42_RS01575 8939f529695b06130c8956f8b6dfe686 722 Gene3D G3DSA:1.20.1050.40 53 184 3.8E-21 T 11-11-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal ATY42_RS01575 8939f529695b06130c8956f8b6dfe686 722 Pfam PF01432 Peptidase family M3 271 719 1.2E-135 T 11-11-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 ATY42_RS01575 8939f529695b06130c8956f8b6dfe686 722 Gene3D G3DSA:3.40.390.10 403 545 2.1E-53 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS01575 8939f529695b06130c8956f8b6dfe686 722 Gene3D G3DSA:1.10.1370.10 546 720 1.1E-114 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ATY42_RS01575 8939f529695b06130c8956f8b6dfe686 722 Gene3D G3DSA:1.10.1370.10 187 393 1.1E-114 T 11-11-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 ATY42_RS01575 8939f529695b06130c8956f8b6dfe686 722 SUPERFAMILY SSF55486 46 719 1.83E-180 T 11-11-2016 ATY42_RS21025 51350d6e0e68819081071f59c6a572d5 182 Pfam PF01609 Transposase DDE domain 71 132 1.6E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21025 51350d6e0e68819081071f59c6a572d5 182 SUPERFAMILY SSF53098 12 146 3.49E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 SUPERFAMILY SSF51735 5 242 3.14E-70 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 Gene3D G3DSA:3.40.50.720 4 242 6.0E-72 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 4.4E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.4E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.4E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.4E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.4E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.4E-32 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS19785 4280b624701d95c4907e99d6db86c735 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 6.2E-54 T 11-11-2016 ATY42_RS17110 4872d35aa8a8cbd31b3b7e00e8f2e9fe 214 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 178 1.1E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS17110 4872d35aa8a8cbd31b3b7e00e8f2e9fe 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 184 5.9E-34 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS17110 4872d35aa8a8cbd31b3b7e00e8f2e9fe 214 SUPERFAMILY SSF56784 5 213 1.53E-51 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS17110 4872d35aa8a8cbd31b3b7e00e8f2e9fe 214 Gene3D G3DSA:1.10.150.240 17 76 1.6E-20 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ATY42_RS17110 4872d35aa8a8cbd31b3b7e00e8f2e9fe 214 Gene3D G3DSA:3.40.50.1000 77 213 1.6E-42 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS16405 b9be5c887bf0191de288a3cf64de1803 282 Pfam PF02666 Phosphatidylserine decarboxylase 61 277 3.2E-53 T 11-11-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ATY42_RS16405 b9be5c887bf0191de288a3cf64de1803 282 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 8 280 45.91 T 11-11-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 ATY42_RS16405 b9be5c887bf0191de288a3cf64de1803 282 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 47 278 6.8E-60 T 11-11-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 SUPERFAMILY SSF109604 58 204 6.28E-23 T 11-11-2016 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 65 725 3.8E-163 T 11-11-2016 IPR004811 RelA/SpoT family GO:0015969 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 SUPERFAMILY SSF81271 396 460 1.24E-19 T 11-11-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Pfam PF13291 ACT domain 649 726 1.2E-18 T 11-11-2016 IPR002912 ACT domain GO:0008152|GO:0016597 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Gene3D G3DSA:3.30.70.260 650 725 1.1E-10 T 11-11-2016 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Pfam PF02824 TGS domain 402 460 1.7E-20 T 11-11-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Gene3D G3DSA:3.10.20.30 401 462 1.9E-22 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 SUPERFAMILY SSF55021 651 726 2.44E-8 T 11-11-2016 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Gene3D G3DSA:3.30.460.10 191 338 2.0E-51 T 11-11-2016 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 SUPERFAMILY SSF81301 206 378 2.45E-63 T 11-11-2016 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 SMART SM00954 249 359 1.4E-67 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Pfam PF13328 HD domain 64 190 1.8E-18 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS08410 259bd2e96df3c53808487962f7c3e968 728 Pfam PF04607 Region found in RelA / SpoT proteins 249 359 1.1E-37 T 11-11-2016 IPR007685 RelA/SpoT GO:0015969 ATY42_RS13790 c7ef540485d718789895292ac7161c05 459 SUPERFAMILY SSF53098 39 426 1.14E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13790 c7ef540485d718789895292ac7161c05 459 Pfam PF13546 DDE superfamily endonuclease 39 312 2.7E-91 T 11-11-2016 ATY42_RS21075 95c21bae402687a182676127986e1f40 219 Pfam PF01609 Transposase DDE domain 51 202 2.2E-20 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21075 95c21bae402687a182676127986e1f40 219 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 2 34 1.6E-9 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS19665 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS19070 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS16805 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS16945 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS20535 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS18705 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS20220 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS21900 e6b8f41834aae5b81c77df0049914336 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 Gene3D G3DSA:3.40.50.2300 183 312 3.1E-47 T 11-11-2016 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 Gene3D G3DSA:3.40.50.2300 63 182 2.1E-39 T 11-11-2016 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 Gene3D G3DSA:1.10.260.40 11 62 1.6E-24 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 SUPERFAMILY SSF53822 70 343 1.03E-67 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 SUPERFAMILY SSF47413 11 68 3.19E-17 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 Pfam PF13377 Periplasmic binding protein-like domain 177 342 3.1E-32 T 11-11-2016 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 4.9E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 4.9E-5 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 SMART SM00354 10 80 4.1E-29 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS01110 7688fbbeae75dd8447481d96290bb78d 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 12 56 4.5E-18 T 11-11-2016 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 Gene3D G3DSA:2.170.130.10 8 61 1.6E-6 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 Gene3D G3DSA:2.40.170.20 413 746 1.1E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 Gene3D G3DSA:2.40.170.20 62 369 1.1E-58 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 Pfam PF00593 TonB dependent receptor 478 746 2.6E-30 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 9 747 6.3E-176 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 SUPERFAMILY SSF56935 387 746 2.09E-72 T 11-11-2016 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 SUPERFAMILY SSF56935 310 344 2.09E-72 T 11-11-2016 ATY42_RS12365 6317e4073ef25705b0f07a52cc9271d0 748 SUPERFAMILY SSF56935 9 280 2.09E-72 T 11-11-2016 ATY42_RS17790 63310ffe5320322fd4542cb214187d53 85 Gene3D G3DSA:3.30.1070.10 32 82 7.0E-18 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ATY42_RS17790 63310ffe5320322fd4542cb214187d53 85 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 81 3.0E-27 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ATY42_RS17790 63310ffe5320322fd4542cb214187d53 85 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 82 17.262 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ATY42_RS17790 63310ffe5320322fd4542cb214187d53 85 Pfam PF03776 Septum formation topological specificity factor MinE 13 80 3.7E-21 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ATY42_RS17790 63310ffe5320322fd4542cb214187d53 85 SUPERFAMILY SSF55229 31 82 1.1E-13 T 11-11-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 ATY42_RS10590 dc4ec5a7f0b5ecee934dcaaee389ac28 294 Gene3D G3DSA:3.60.110.10 6 290 7.8E-101 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS10590 dc4ec5a7f0b5ecee934dcaaee389ac28 294 Pfam PF00795 Carbon-nitrogen hydrolase 8 271 3.8E-56 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS10590 dc4ec5a7f0b5ecee934dcaaee389ac28 294 SUPERFAMILY SSF56317 6 291 3.53E-87 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS00025 b2a41d31802c0dcae8c490bb2155cdab 278 Pfam PF02517 CAAX protease self-immunity 168 266 3.1E-18 T 11-11-2016 IPR003675 CAAX amino terminal protease GO:0016020 ATY42_RS03125 f4bfa70e73d74a3b6d2b443f2930bf53 443 Gene3D G3DSA:3.30.565.10 287 418 2.9E-11 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03125 f4bfa70e73d74a3b6d2b443f2930bf53 443 SUPERFAMILY SSF55874 287 417 1.83E-17 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03125 f4bfa70e73d74a3b6d2b443f2930bf53 443 Pfam PF06580 Histidine kinase 230 309 6.5E-20 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ATY42_RS03125 f4bfa70e73d74a3b6d2b443f2930bf53 443 SMART SM00387 324 422 3.3E-4 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21360 70e22daa471d81a0213e816a7d3f939e 1309 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 256 335 1.6E-39 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS21360 70e22daa471d81a0213e816a7d3f939e 1309 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 873 1064 3.9E-97 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS21360 70e22daa471d81a0213e816a7d3f939e 1309 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 467 675 2.0E-136 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS07315 283e3e59cc2a2744dcce395107c2c884 270 Gene3D G3DSA:3.90.70.10 47 255 9.0E-29 T 11-11-2016 ATY42_RS07315 283e3e59cc2a2744dcce395107c2c884 270 Pfam PF00112 Papain family cysteine protease 54 255 1.3E-10 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ATY42_RS07315 283e3e59cc2a2744dcce395107c2c884 270 SUPERFAMILY SSF54001 40 258 1.79E-35 T 11-11-2016 ATY42_RS07315 283e3e59cc2a2744dcce395107c2c884 270 SMART SM00645 53 267 6.5E-6 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ATY42_RS07315 283e3e59cc2a2744dcce395107c2c884 270 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 222 232 - T 11-11-2016 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 ATY42_RS06940 6bf1bcd94138306500857cd834eb98da 390 Pfam PF13546 DDE superfamily endonuclease 18 291 1.4E-90 T 11-11-2016 ATY42_RS06940 6bf1bcd94138306500857cd834eb98da 390 SUPERFAMILY SSF53098 18 339 1.82E-17 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22710 6f3c422b5e101e1dabcdca0358db5e1d 281 Gene3D G3DSA:3.30.420.10 109 265 6.0E-43 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22710 6f3c422b5e101e1dabcdca0358db5e1d 281 Pfam PF13276 HTH-like domain 47 98 1.4E-7 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS22710 6f3c422b5e101e1dabcdca0358db5e1d 281 Pfam PF13683 Integrase core domain 198 264 4.9E-28 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS22710 6f3c422b5e101e1dabcdca0358db5e1d 281 SUPERFAMILY SSF53098 108 268 6.07E-38 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 SMART SM01263 498 637 4.5E-45 T 11-11-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 348 360 1.0E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 183 198 1.0E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 228 243 1.0E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 329 344 1.0E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 312 1.0E-16 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 SUPERFAMILY SSF63737 46 245 2.75E-37 T 11-11-2016 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 SUPERFAMILY SSF48371 502 637 1.38E-36 T 11-11-2016 IPR016024 Armadillo-type fold GO:0005488 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 SUPERFAMILY SSF55486 250 491 2.38E-69 T 11-11-2016 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 Pfam PF01433 Peptidase family M1 61 422 2.3E-61 T 11-11-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 Pfam PF09127 Leukotriene A4 hydrolase, C-terminal 519 636 6.5E-28 T 11-11-2016 IPR015211 Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal GO:0008237|GO:0008270 KEGG: 00590+3.3.2.6 ATY42_RS20025 b87caf95448cca74c183f53c2c3514b1 670 Gene3D G3DSA:1.10.390.10 342 493 4.4E-36 T 11-11-2016 ATY42_RS11745 83f5f60b242b4e1ebd02700405e2a53c 271 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 10 269 40.496 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATY42_RS11745 83f5f60b242b4e1ebd02700405e2a53c 271 Gene3D G3DSA:3.20.20.60 9 269 6.3E-105 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS11745 83f5f60b242b4e1ebd02700405e2a53c 271 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 15 269 1.4E-96 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATY42_RS11745 83f5f60b242b4e1ebd02700405e2a53c 271 PIRSF PIRSF000388 1 271 1.4E-94 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATY42_RS11745 83f5f60b242b4e1ebd02700405e2a53c 271 SUPERFAMILY SSF51621 10 269 3.23E-97 T 11-11-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 ATY42_RS11745 83f5f60b242b4e1ebd02700405e2a53c 271 Pfam PF02548 Ketopantoate hydroxymethyltransferase 11 264 5.6E-102 T 11-11-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ATY42_RS21400 8adde4837cb851401485a6435dc0cf2b 143 SUPERFAMILY SSF55874 35 127 3.81E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21400 8adde4837cb851401485a6435dc0cf2b 143 Gene3D G3DSA:3.30.565.10 12 131 6.8E-8 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21400 8adde4837cb851401485a6435dc0cf2b 143 Pfam PF13581 Histidine kinase-like ATPase domain 9 130 6.2E-22 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS14150 214c1d292b36bff8ce2af90f4eb45e9b 340 SMART SM00260 201 339 1.5E-20 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14150 214c1d292b36bff8ce2af90f4eb45e9b 340 Gene3D G3DSA:2.30.30.40 281 333 6.8E-6 T 11-11-2016 ATY42_RS14150 214c1d292b36bff8ce2af90f4eb45e9b 340 SUPERFAMILY SSF50341 203 340 3.4E-30 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14150 214c1d292b36bff8ce2af90f4eb45e9b 340 Pfam PF01584 CheW-like domain 207 339 1.4E-29 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS14150 214c1d292b36bff8ce2af90f4eb45e9b 340 Gene3D G3DSA:2.40.50.180 244 280 7.1E-8 T 11-11-2016 ATY42_RS16915 4bdc6e0aa54beb9fa4e3b7f84cc80601 149 Pfam PF13936 Helix-turn-helix domain 6 47 7.8E-14 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS17075 7b09ba3f45b44ccc38360f1119094c71 272 SUPERFAMILY SSF53790 3 249 1.57E-76 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS17075 7b09ba3f45b44ccc38360f1119094c71 272 Gene3D G3DSA:3.30.950.10 120 250 2.0E-47 T 11-11-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS17075 7b09ba3f45b44ccc38360f1119094c71 272 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 11-11-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS17075 7b09ba3f45b44ccc38360f1119094c71 272 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 215 2.9E-49 T 11-11-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS17075 7b09ba3f45b44ccc38360f1119094c71 272 Gene3D G3DSA:3.40.1010.10 3 119 2.4E-43 T 11-11-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 ATY42_RS17075 7b09ba3f45b44ccc38360f1119094c71 272 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 1.1E-89 T 11-11-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 ATY42_RS13825 be14aeb9a51bbd146c06853acce1b048 92 Gene3D G3DSA:1.10.10.10 10 78 2.5E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS13825 be14aeb9a51bbd146c06853acce1b048 92 SUPERFAMILY SSF46785 8 72 2.04E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 13 418 1.3E-111 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 13 186 2.8E-31 T 11-11-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 SUPERFAMILY SSF51735 13 197 5.47E-43 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 SUPERFAMILY SSF48179 207 297 1.29E-25 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 SMART SM00984 323 423 1.3E-34 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 323 421 9.5E-20 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 PIRSF PIRSF500136 4 430 6.9E-146 T 11-11-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 PIRSF PIRSF000124 12 429 2.1E-50 T 11-11-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 Gene3D G3DSA:3.40.50.720 238 425 5.8E-39 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 296 3.8E-24 T 11-11-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 Gene3D G3DSA:3.40.50.720 13 200 9.3E-52 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS15465 f02545077e50c55c56c9cfe900e2e591 430 SUPERFAMILY SSF52413 313 425 4.97E-25 T 11-11-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ATY42_RS05110 c969bbf30966bd81f302cf9bba468e59 71 SUPERFAMILY SSF54427 18 64 6.4E-5 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS12150 8b5717838d74414adb27b4a5ad0525c2 281 Gene3D G3DSA:3.90.79.10 117 276 5.1E-37 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS12150 8b5717838d74414adb27b4a5ad0525c2 281 Pfam PF00293 NUDIX domain 127 228 3.0E-12 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS12150 8b5717838d74414adb27b4a5ad0525c2 281 Pfam PF06945 Protein of unknown function (DUF1289) 29 70 1.9E-17 T 11-11-2016 IPR010710 Protein of unknown function DUF1289 ATY42_RS12150 8b5717838d74414adb27b4a5ad0525c2 281 SUPERFAMILY SSF55811 122 273 9.21E-32 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS23175 66a2420575794dce849ab457817a5528 370 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 84 8.4E-12 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 PRINTS PR00709 Avidin signature 53 61 6.7E-7 T 11-11-2016 IPR005469 Avidin ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 PRINTS PR00709 Avidin signature 120 131 6.7E-7 T 11-11-2016 IPR005469 Avidin ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 PRINTS PR00709 Avidin signature 32 46 6.7E-7 T 11-11-2016 IPR005469 Avidin ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 PRINTS PR00709 Avidin signature 103 113 6.7E-7 T 11-11-2016 IPR005469 Avidin ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 Pfam PF01382 Avidin family 32 145 2.2E-28 T 11-11-2016 IPR005468 Avidin/streptavidin ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 Gene3D G3DSA:2.40.128.30 28 146 2.5E-32 T 11-11-2016 IPR005468 Avidin/streptavidin ATY42_RS20240 b4189831936fd020b86c6197073c3e1e 148 SUPERFAMILY SSF50876 32 147 1.36E-33 T 11-11-2016 IPR005468 Avidin/streptavidin ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 Gene3D G3DSA:3.90.226.10 191 373 2.6E-64 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 SMART SM00245 181 371 4.0E-70 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 SMART SM00228 110 179 1.5E-10 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 Gene3D G3DSA:3.30.750.44 59 116 4.4E-7 T 11-11-2016 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 Pfam PF03572 Peptidase family S41 207 368 7.4E-55 T 11-11-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 Gene3D G3DSA:2.30.42.10 117 190 4.5E-23 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 SUPERFAMILY SSF52096 200 375 2.98E-75 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 SUPERFAMILY SSF52096 50 129 2.98E-75 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 SUPERFAMILY SSF50156 105 191 9.93E-16 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 63 371 2.0E-95 T 11-11-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ATY42_RS23060 ea1b2425ac1131952eb7f620eed8fa97 507 Pfam PF13180 PDZ domain 111 188 5.2E-13 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 Gene3D G3DSA:3.40.50.1100 152 317 1.5E-56 T 11-11-2016 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 Gene3D G3DSA:3.40.50.1100 2 41 1.5E-56 T 11-11-2016 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 11-11-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 Pfam PF00571 CBS domain 341 388 7.8E-7 T 11-11-2016 IPR000644 CBS domain ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 SUPERFAMILY SSF53686 2 321 1.28E-89 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 Gene3D G3DSA:3.10.580.10 341 453 1.5E-17 T 11-11-2016 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 Gene3D G3DSA:3.40.50.1100 42 146 1.2E-36 T 11-11-2016 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 SUPERFAMILY SSF54631 335 452 2.95E-17 T 11-11-2016 ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 SMART SM00116 343 390 5.1E-7 T 11-11-2016 IPR000644 CBS domain ATY42_RS03750 70128fe3e5367c9888371b848620f088 456 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 302 8.5E-63 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS02860 724e98c2e7b1ad26e1964cf95f02d1c3 304 PIRSF PIRSF026649 1 295 8.8E-76 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ATY42_RS02860 724e98c2e7b1ad26e1964cf95f02d1c3 304 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 284 1.9E-45 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ATY42_RS13125 c2795f19546b6f1c10dd8e2a450a8dad 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS13125 c2795f19546b6f1c10dd8e2a450a8dad 338 Pfam PF12762 ISXO2-like transposase domain 154 299 1.5E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS13125 c2795f19546b6f1c10dd8e2a450a8dad 338 SMART SM01126 154 299 2.9E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 Gene3D G3DSA:3.30.565.10 286 422 1.9E-20 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 Gene3D G3DSA:1.10.287.130 205 274 6.0E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 SUPERFAMILY SSF55874 287 422 4.85E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 SMART SM00387 323 426 2.0E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 275 1.8E-8 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 SUPERFAMILY SSF47384 195 274 1.55E-12 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 2.6E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 2.6E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 2.6E-5 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 422 7.6E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17800 201859117ea6a1f6a1afb8fc406db4c5 430 SMART SM00388 212 278 4.5E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS17025 cd646b795591745956632414d8d4437d 241 Gene3D G3DSA:3.40.50.620 12 212 5.4E-64 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS17025 cd646b795591745956632414d8d4437d 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 45 215 9.3E-54 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 ATY42_RS17025 cd646b795591745956632414d8d4437d 241 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 29 239 4.9E-83 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ATY42_RS17025 cd646b795591745956632414d8d4437d 241 SUPERFAMILY SSF52402 16 204 5.8E-58 T 11-11-2016 ATY42_RS17025 cd646b795591745956632414d8d4437d 241 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 17 238 3.9E-89 T 11-11-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 ATY42_RS17025 cd646b795591745956632414d8d4437d 241 PIRSF PIRSF000857 3 241 6.7E-61 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ATY42_RS17025 cd646b795591745956632414d8d4437d 241 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 8 239 41.125 T 11-11-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ATY42_RS10395 5a883137da84089076b36a2edc3dfb8a 188 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 37.462 T 11-11-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389 ATY42_RS10395 5a883137da84089076b36a2edc3dfb8a 188 SUPERFAMILY SSF51182 1 180 3.33E-37 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS10395 5a883137da84089076b36a2edc3dfb8a 188 Gene3D G3DSA:2.60.120.10 5 180 4.9E-54 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS10395 5a883137da84089076b36a2edc3dfb8a 188 Pfam PF03079 ARD/ARD' family 4 164 8.6E-32 T 11-11-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 5.4E-96 T 11-11-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 SUPERFAMILY SSF52540 2 209 4.5E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 SUPERFAMILY SSF48019 211 333 1.6E-20 T 11-11-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 Pfam PF06144 DNA polymerase III, delta subunit 20 189 5.6E-21 T 11-11-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 Gene3D G3DSA:3.40.50.300 1 134 5.1E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 Gene3D G3DSA:1.10.8.60 143 221 3.2E-29 T 11-11-2016 ATY42_RS16670 b0f51dbcc6842fba1717f1440af75b32 342 Gene3D G3DSA:1.20.272.20 222 335 7.6E-24 T 11-11-2016 ATY42_RS12250 81da3b30ae53224ed4c8349c04efefb7 211 SMART SM00479 24 209 4.0E-24 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS12250 81da3b30ae53224ed4c8349c04efefb7 211 Hamap MF_00157 Ribonuclease T [rnt]. 1 211 86.314 T 11-11-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 ATY42_RS12250 81da3b30ae53224ed4c8349c04efefb7 211 SUPERFAMILY SSF53098 15 208 1.57E-52 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12250 81da3b30ae53224ed4c8349c04efefb7 211 Pfam PF00929 Exonuclease 26 200 2.2E-24 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS12250 81da3b30ae53224ed4c8349c04efefb7 211 TIGRFAM TIGR01298 RNaseT: ribonuclease T 16 208 8.3E-100 T 11-11-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 ATY42_RS12250 81da3b30ae53224ed4c8349c04efefb7 211 Gene3D G3DSA:3.30.420.10 16 208 5.1E-52 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16940 67ffb7cae58a99fd12e11e94868fb791 115 Pfam PF13586 Transposase DDE domain 29 111 2.0E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS03615 67ffb7cae58a99fd12e11e94868fb791 115 Pfam PF13586 Transposase DDE domain 29 111 2.0E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS06900 143b0c2332c259172ed9f21915e9a38d 72 SUPERFAMILY SSF52317 6 55 9.58E-5 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS06900 143b0c2332c259172ed9f21915e9a38d 72 Gene3D G3DSA:3.40.50.880 4 63 3.6E-6 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS19555 13287c9d872ac670381a5d3b751105d1 207 Pfam PF01926 50S ribosome-binding GTPase 27 134 2.4E-18 T 11-11-2016 IPR006073 GTP binding domain GO:0005525 ATY42_RS19555 13287c9d872ac670381a5d3b751105d1 207 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 197 26.208 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ATY42_RS19555 13287c9d872ac670381a5d3b751105d1 207 Gene3D G3DSA:3.40.50.300 6 191 5.7E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19555 13287c9d872ac670381a5d3b751105d1 207 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 191 5.0E-68 T 11-11-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ATY42_RS19555 13287c9d872ac670381a5d3b751105d1 207 SUPERFAMILY SSF52540 16 195 1.06E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS15285 7dc65aa6c610faa9fb344d4da76c8961 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 106 141 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATY42_RS15285 7dc65aa6c610faa9fb344d4da76c8961 165 Pfam PF14441 OTT_1508-like deaminase 105 163 1.4E-10 T 11-11-2016 IPR027796 OTT_1508-like deaminase ATY42_RS03930 ed056336647b9bc4da5c07520dd52ef1 160 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 19 150 3.7E-42 T 11-11-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 ATY42_RS03930 ed056336647b9bc4da5c07520dd52ef1 160 SUPERFAMILY SSF55729 12 153 9.45E-36 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS03930 ed056336647b9bc4da5c07520dd52ef1 160 Gene3D G3DSA:3.40.630.30 7 142 2.0E-35 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS03930 ed056336647b9bc4da5c07520dd52ef1 160 Pfam PF00583 Acetyltransferase (GNAT) family 54 128 1.2E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 2.3E-11 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 2.3E-11 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 2.3E-11 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 Pfam PF09278 MerR, DNA binding 47 112 1.3E-15 T 11-11-2016 IPR015358 Transcription regulator MerR, DNA binding ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 SUPERFAMILY SSF46955 5 125 9.16E-27 T 11-11-2016 IPR009061 Putative DNA-binding domain ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 SMART SM00422 5 73 5.7E-22 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 Pfam PF00376 MerR family regulatory protein 6 42 5.6E-12 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 Gene3D G3DSA:1.10.1660.10 2 56 2.1E-18 T 11-11-2016 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 5 142 4.3E-64 T 11-11-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 ATY42_RS06160 8fcd39ea93475a88f591f6f69dec9637 148 Gene3D G3DSA:1.10.1660.10 57 136 5.0E-14 T 11-11-2016 ATY42_RS01465 6da5d89527c8c92f878cf4dd7dd7f39e 265 Gene3D G3DSA:3.30.420.10 101 250 4.4E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01465 6da5d89527c8c92f878cf4dd7dd7f39e 265 Pfam PF13276 HTH-like domain 39 90 1.2E-7 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS01465 6da5d89527c8c92f878cf4dd7dd7f39e 265 Pfam PF00665 Integrase core domain 105 219 3.7E-24 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS01465 6da5d89527c8c92f878cf4dd7dd7f39e 265 SUPERFAMILY SSF53098 100 248 2.28E-35 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05285 3b1d10b55b6a7d50631eba3ed35f0183 423 Gene3D G3DSA:3.90.1150.10 287 406 7.0E-25 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS05285 3b1d10b55b6a7d50631eba3ed35f0183 423 Gene3D G3DSA:3.40.640.10 56 286 3.9E-68 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS05285 3b1d10b55b6a7d50631eba3ed35f0183 423 Pfam PF00155 Aminotransferase class I and II 39 391 1.2E-49 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS05285 3b1d10b55b6a7d50631eba3ed35f0183 423 SUPERFAMILY SSF53383 10 405 1.45E-90 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS21775 23f434837a57d0dfc2e347e59798853b 221 Pfam PF02677 Uncharacterized BCR, COG1636 19 193 4.1E-64 T 11-11-2016 IPR003828 Protein of unknown function DUF208 ATY42_RS17100 1ae71fff4a420754955adfc126dabf55 334 Gene3D G3DSA:3.20.20.70 4 333 4.3E-146 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS17100 1ae71fff4a420754955adfc126dabf55 334 ProSitePatterns PS00158 Fructose-bisphosphate aldolase class-I active site. 211 221 - T 11-11-2016 IPR029768 Fructose-bisphosphate aldolase class-I active site KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17100 1ae71fff4a420754955adfc126dabf55 334 SUPERFAMILY SSF51569 4 333 5.65E-130 T 11-11-2016 ATY42_RS17100 1ae71fff4a420754955adfc126dabf55 334 Pfam PF00274 Fructose-bisphosphate aldolase class-I 6 333 3.7E-137 T 11-11-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS19465 5eeb4d7b4e6cd649b6d0117f51a3c498 78 Pfam PF14329 Domain of unknown function (DUF4386) 2 63 1.8E-12 T 11-11-2016 IPR025495 Protein of unknown function DUF4386 ATY42_RS14760 4d61494bcabb3c1d79deb77741d44b6d 257 Gene3D G3DSA:2.70.70.10 131 256 1.5E-37 T 11-11-2016 ATY42_RS14760 4d61494bcabb3c1d79deb77741d44b6d 257 Pfam PF01476 LysM domain 60 100 1.3E-13 T 11-11-2016 IPR018392 LysM domain ATY42_RS14760 4d61494bcabb3c1d79deb77741d44b6d 257 Pfam PF01551 Peptidase family M23 157 250 9.5E-29 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS14760 4d61494bcabb3c1d79deb77741d44b6d 257 Gene3D G3DSA:3.10.350.10 60 102 1.7E-17 T 11-11-2016 IPR018392 LysM domain ATY42_RS14760 4d61494bcabb3c1d79deb77741d44b6d 257 SUPERFAMILY SSF51261 59 254 8.37E-46 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS14760 4d61494bcabb3c1d79deb77741d44b6d 257 SMART SM00257 58 102 8.2E-16 T 11-11-2016 IPR018392 LysM domain ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 PRINTS PR00723 Subtilisin serine protease family (S8) signature 265 278 3.2E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 PRINTS PR00723 Subtilisin serine protease family (S8) signature 197 216 3.2E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 PRINTS PR00723 Subtilisin serine protease family (S8) signature 453 469 3.2E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 Pfam PF00082 Subtilase family 197 496 1.9E-44 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 Gene3D G3DSA:3.40.50.200 120 522 8.3E-77 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 202 213 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 454 464 - T 11-11-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 SUPERFAMILY SSF52743 125 141 2.49E-69 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 SUPERFAMILY SSF52743 176 522 2.49E-69 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS03260 66fce8cc419c4afff8f458faaf950d9f 635 Pfam PF04151 Bacterial pre-peptidase C-terminal domain 554 618 1.2E-8 T 11-11-2016 IPR007280 Peptidase, C-terminal, archaeal/bacterial ATY42_RS19025 523ca87118215ef5a3fb76c9a56b4e36 432 Pfam PF07670 Nucleoside recognition 98 197 2.1E-7 T 11-11-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ATY42_RS19025 523ca87118215ef5a3fb76c9a56b4e36 432 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 209 428 4.5E-75 T 11-11-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 ATY42_RS19025 523ca87118215ef5a3fb76c9a56b4e36 432 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 13 86 3.5E-25 T 11-11-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 ATY42_RS22495 f804f829047037353ac010efd3044c41 181 SUPERFAMILY SSF88874 1 175 4.01E-45 T 11-11-2016 ATY42_RS22495 f804f829047037353ac010efd3044c41 181 Pfam PF07484 Phage Tail Collar Domain 7 63 3.6E-22 T 11-11-2016 IPR011083 Phage tail collar domain ATY42_RS22495 f804f829047037353ac010efd3044c41 181 Gene3D G3DSA:3.90.1340.10 1 67 3.5E-26 T 11-11-2016 IPR011083 Phage tail collar domain ATY42_RS21910 a396ce741b22df025d4434bc58465f1d 343 SUPERFAMILY SSF46689 11 129 4.3E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS21910 a396ce741b22df025d4434bc58465f1d 343 Pfam PF13592 Winged helix-turn helix 95 153 2.7E-17 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS21910 a396ce741b22df025d4434bc58465f1d 343 Pfam PF13551 Winged helix-turn helix 18 77 8.0E-15 T 11-11-2016 ATY42_RS21910 a396ce741b22df025d4434bc58465f1d 343 Pfam PF13358 DDE superfamily endonuclease 171 310 5.3E-31 T 11-11-2016 ATY42_RS06845 fc1cae72845bb5edef010b849f87acf5 232 Gene3D G3DSA:3.30.420.10 109 228 2.2E-31 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06845 fc1cae72845bb5edef010b849f87acf5 232 Pfam PF13276 HTH-like domain 46 98 2.3E-9 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS06845 fc1cae72845bb5edef010b849f87acf5 232 Pfam PF00665 Integrase core domain 113 227 6.9E-23 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS06845 fc1cae72845bb5edef010b849f87acf5 232 SUPERFAMILY SSF53098 108 230 1.9E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22720 bb5f53e08a1240de362f3b2462a4e329 131 Pfam PF01609 Transposase DDE domain 1 128 1.6E-17 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00490 3b5aef71607f414deaa76245fbd88f41 86 Pfam PF01313 Bacterial export proteins, family 3 6 76 2.9E-19 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS00490 3b5aef71607f414deaa76245fbd88f41 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.7E-16 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS00490 3b5aef71607f414deaa76245fbd88f41 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.7E-16 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS00490 3b5aef71607f414deaa76245fbd88f41 86 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.7E-16 T 11-11-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ATY42_RS00490 3b5aef71607f414deaa76245fbd88f41 86 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 5 83 1.7E-26 T 11-11-2016 IPR006306 Type III secretion protein HrpO GO:0006810|GO:0016021 ATY42_RS12425 fcd575a337a6c5a74a6b9d7563ec1f18 206 PIRSF PIRSF004553 15 193 4.4E-43 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS12425 fcd575a337a6c5a74a6b9d7563ec1f18 206 Pfam PF03602 Conserved hypothetical protein 95 16 190 4.9E-50 T 11-11-2016 ATY42_RS12425 fcd575a337a6c5a74a6b9d7563ec1f18 206 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 13 191 7.4E-42 T 11-11-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS12425 fcd575a337a6c5a74a6b9d7563ec1f18 206 SUPERFAMILY SSF53335 15 191 2.41E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12425 fcd575a337a6c5a74a6b9d7563ec1f18 206 Gene3D G3DSA:3.40.50.150 8 192 4.2E-56 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS21515 0a683aa4d5fe805e402f5850e55ff4e5 532 Pfam PF00593 TonB dependent receptor 220 484 1.2E-15 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS21515 0a683aa4d5fe805e402f5850e55ff4e5 532 Gene3D G3DSA:2.40.170.20 19 57 4.6E-38 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS21515 0a683aa4d5fe805e402f5850e55ff4e5 532 Gene3D G3DSA:2.40.170.20 93 494 4.6E-38 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS21515 0a683aa4d5fe805e402f5850e55ff4e5 532 SUPERFAMILY SSF56935 114 335 1.19E-33 T 11-11-2016 ATY42_RS21515 0a683aa4d5fe805e402f5850e55ff4e5 532 SUPERFAMILY SSF56935 374 484 1.19E-33 T 11-11-2016 ATY42_RS21515 0a683aa4d5fe805e402f5850e55ff4e5 532 SUPERFAMILY SSF56935 18 77 1.19E-33 T 11-11-2016 ATY42_RS19910 87ea9916242adbed97122bf1e468f140 379 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 70 371 1.2E-124 T 11-11-2016 IPR011757 Lytic transglycosylase MltB ATY42_RS19910 87ea9916242adbed97122bf1e468f140 379 Gene3D G3DSA:1.10.530.10 109 165 1.5E-53 T 11-11-2016 ATY42_RS19910 87ea9916242adbed97122bf1e468f140 379 Gene3D G3DSA:1.10.530.10 259 374 1.5E-53 T 11-11-2016 ATY42_RS19910 87ea9916242adbed97122bf1e468f140 379 SUPERFAMILY SSF53955 70 373 3.19E-82 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS19910 87ea9916242adbed97122bf1e468f140 379 Pfam PF13406 Transglycosylase SLT domain 68 369 7.4E-91 T 11-11-2016 IPR031304 Transglycosylase SLT domain 2 ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 Gene3D G3DSA:2.40.128.20 6 175 5.5E-37 T 11-11-2016 IPR012674 Calycin ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 PIRSF PIRSF036893 1 177 1.9E-40 T 11-11-2016 IPR022271 Lipocalin, ApoD type ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 Pfam PF08212 Lipocalin-like domain 33 174 3.2E-44 T 11-11-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 SUPERFAMILY SSF50814 8 174 1.22E-32 T 11-11-2016 IPR011038 Calycin-like ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 7.3E-9 T 11-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 PRINTS PR01171 Bacterial lipocalin signature 33 47 7.3E-9 T 11-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 7.3E-9 T 11-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 PRINTS PR01171 Bacterial lipocalin signature 50 66 7.3E-9 T 11-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 ATY42_RS01205 3b33d713fb6e7d513dd6b579bc7e2914 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 7.3E-9 T 11-11-2016 IPR002446 Lipocalin, bacterial GO:0005215 ATY42_RS21340 d7011723cfc67d920da249a021cdccad 105 Gene3D G3DSA:3.20.20.80 15 105 2.6E-10 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS21340 d7011723cfc67d920da249a021cdccad 105 Pfam PF07745 Glycosyl hydrolase family 53 14 84 6.3E-7 T 11-11-2016 IPR011683 Glycosyl hydrolase family 53 GO:0015926 ATY42_RS21340 d7011723cfc67d920da249a021cdccad 105 SUPERFAMILY SSF51445 14 104 1.29E-10 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS07325 88ff4c78b1671938245d1dbbf9cf64d1 389 Pfam PF05598 Transposase domain (DUF772) 57 131 5.4E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07325 88ff4c78b1671938245d1dbbf9cf64d1 389 Pfam PF01609 Transposase DDE domain 143 318 3.7E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 Gene3D G3DSA:2.140.10.10 8 403 6.9E-68 T 11-11-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 341 372 44.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 262 293 480.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 166 197 0.29 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 125 157 0.015 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 76 107 2.8E-4 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 299 331 34.0 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SMART SM00564 210 242 0.21 T 11-11-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 5 403 38.611 T 11-11-2016 IPR017687 Outer membrane protein assembly factor BamB ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 Pfam PF13360 PQQ-like domain 58 112 1.2E-4 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 Pfam PF13360 PQQ-like domain 119 330 1.3E-43 T 11-11-2016 IPR002372 Pyrrolo-quinoline quinone repeat ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 402 2.0E-131 T 11-11-2016 IPR017687 Outer membrane protein assembly factor BamB ATY42_RS12540 7ae405c311ff22f3e678817137bd8358 405 SUPERFAMILY SSF50998 42 395 2.26E-78 T 11-11-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily ATY42_RS09810 a7ba378a6c789b102e0cdbe35b38e41b 90 Pfam PF00082 Subtilase family 1 75 3.0E-10 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS09810 a7ba378a6c789b102e0cdbe35b38e41b 90 SUPERFAMILY SSF52743 1 87 1.13E-14 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS09810 a7ba378a6c789b102e0cdbe35b38e41b 90 Gene3D G3DSA:3.40.50.200 1 87 9.6E-15 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 Gene3D G3DSA:3.40.190.10 20 118 8.0E-43 T 11-11-2016 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 Gene3D G3DSA:3.40.190.10 224 274 8.0E-43 T 11-11-2016 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 22 274 1.7E-59 T 11-11-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 SUPERFAMILY SSF53850 22 274 8.69E-56 T 11-11-2016 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 Gene3D G3DSA:1.10.3720.10 282 469 1.6E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 312 482 9.6E-23 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 SUPERFAMILY SSF161098 288 472 2.75E-34 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS22660 1cebe0286dfb51afa0df10fb2cbf6447 490 Gene3D G3DSA:3.40.190.120 119 217 2.1E-30 T 11-11-2016 ATY42_RS01430 a975d2ce0e91f3c622ac49eae1dc233f 318 SUPERFAMILY SSF53098 165 308 5.61E-21 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01430 a975d2ce0e91f3c622ac49eae1dc233f 318 Pfam PF00665 Integrase core domain 177 267 5.5E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS01430 a975d2ce0e91f3c622ac49eae1dc233f 318 Pfam PF13936 Helix-turn-helix domain 3 45 9.2E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS01430 a975d2ce0e91f3c622ac49eae1dc233f 318 Gene3D G3DSA:3.30.420.10 165 307 3.5E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 17 194 1.3E-64 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 Pfam PF01227 GTP cyclohydrolase I 17 194 2.6E-71 T 11-11-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 Gene3D G3DSA:1.10.286.10 12 63 5.8E-22 T 11-11-2016 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 11-11-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 Gene3D G3DSA:3.30.1130.10 69 195 3.4E-53 T 11-11-2016 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 12 195 38.308 T 11-11-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|Reactome: R-HSA-1474151 ATY42_RS23130 4b38b3168c15016db431f21ea2d2488b 200 SUPERFAMILY SSF55620 8 195 8.89E-74 T 11-11-2016 ATY42_RS08595 d094c8ab048e99f7763b62f755ec8e34 123 Gene3D G3DSA:2.40.50.100 66 99 1.1E-6 T 11-11-2016 ATY42_RS08595 d094c8ab048e99f7763b62f755ec8e34 123 Pfam PF13533 Biotin-lipoyl like 69 101 8.6E-7 T 11-11-2016 ATY42_RS08595 d094c8ab048e99f7763b62f755ec8e34 123 SUPERFAMILY SSF51230 63 106 1.33E-5 T 11-11-2016 IPR011053 Single hybrid motif ATY42_RS22410 6bb48c94d85938031979426e361360ef 82 Gene3D G3DSA:1.10.260.40 4 79 2.6E-22 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22410 6bb48c94d85938031979426e361360ef 82 SMART SM00530 17 72 1.1E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS22410 6bb48c94d85938031979426e361360ef 82 SUPERFAMILY SSF47413 12 74 1.75E-13 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS22410 6bb48c94d85938031979426e361360ef 82 Pfam PF13560 Helix-turn-helix domain 16 70 3.0E-11 T 11-11-2016 ATY42_RS00765 122659e98f798015e97ceca9e1cea694 417 Gene3D G3DSA:1.20.120.380 304 391 5.5E-27 T 11-11-2016 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 ATY42_RS00765 122659e98f798015e97ceca9e1cea694 417 SUPERFAMILY SSF56349 149 375 3.83E-66 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS00765 122659e98f798015e97ceca9e1cea694 417 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 157 360 8.8E-31 T 11-11-2016 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003918|GO:0006265 ATY42_RS00765 122659e98f798015e97ceca9e1cea694 417 Gene3D G3DSA:3.90.15.10 160 289 2.4E-37 T 11-11-2016 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 ATY42_RS00765 122659e98f798015e97ceca9e1cea694 417 SUPERFAMILY SSF55869 99 153 2.48E-17 T 11-11-2016 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 SMART SM00421 141 198 4.5E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 SMART SM00448 6 117 3.1E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 SUPERFAMILY SSF46894 133 203 1.26E-16 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 Pfam PF00072 Response regulator receiver domain 8 118 3.0E-22 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 Gene3D G3DSA:1.10.10.10 144 203 2.2E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 198 6.3E-16 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 Gene3D G3DSA:3.40.50.2300 7 143 1.9E-30 T 11-11-2016 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 SUPERFAMILY SSF52172 8 155 7.97E-31 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 2.2E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 2.2E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS11825 e627b70a2ca99298cabb4eb5cfa5e8ed 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 2.2E-8 T 11-11-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ATY42_RS17680 bd2424c3adbff0a93950820f1eb082a0 327 TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family 10 142 9.3E-35 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 ATY42_RS17680 bd2424c3adbff0a93950820f1eb082a0 327 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 11 138 3.9E-23 T 11-11-2016 IPR017748 Type VI secretion system-associated, BMAA0400 ATY42_RS17680 bd2424c3adbff0a93950820f1eb082a0 327 Gene3D G3DSA:3.40.1730.10 9 182 7.7E-31 T 11-11-2016 ATY42_RS22285 de93a64d32b3c38e15efada17f53b941 344 SUPERFAMILY SSF75005 9 330 6.0E-55 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS22285 de93a64d32b3c38e15efada17f53b941 344 Pfam PF04616 Glycosyl hydrolases family 43 84 329 4.3E-23 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 ATY42_RS22285 de93a64d32b3c38e15efada17f53b941 344 Gene3D G3DSA:2.115.10.20 10 330 7.4E-67 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS00355 8d2e8a617cacbeb501bd55bca38540f9 454 Pfam PF02638 Glycosyl hydrolase-like 10 68 403 2.2E-88 T 11-11-2016 IPR003790 Glycosyl hydrolase-like 10 ATY42_RS00355 8d2e8a617cacbeb501bd55bca38540f9 454 SUPERFAMILY SSF51445 94 386 7.03E-26 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS14770 66614f0accb844eea3a792e1c6c7d9b3 225 Gene3D G3DSA:3.40.50.150 29 222 2.8E-57 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14770 66614f0accb844eea3a792e1c6c7d9b3 225 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 17 225 34.635 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ATY42_RS14770 66614f0accb844eea3a792e1c6c7d9b3 225 SUPERFAMILY SSF53335 19 222 1.74E-42 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS14770 66614f0accb844eea3a792e1c6c7d9b3 225 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 23 221 4.1E-55 T 11-11-2016 ATY42_RS14770 66614f0accb844eea3a792e1c6c7d9b3 225 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 18 222 1.7E-60 T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ATY42_RS14770 66614f0accb844eea3a792e1c6c7d9b3 225 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 145 160 - T 11-11-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 Gene3D G3DSA:3.30.1150.10 229 340 7.5E-12 T 11-11-2016 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 265 336 1.8E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 PRINTS PR01374 Gram-negative bacterial tonB protein signature 301 318 7.2E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 PRINTS PR01374 Gram-negative bacterial tonB protein signature 282 300 7.2E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 PRINTS PR01374 Gram-negative bacterial tonB protein signature 261 282 7.2E-8 T 11-11-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 SUPERFAMILY SSF74653 259 324 1.44E-18 T 11-11-2016 ATY42_RS01770 0c90eff9a77b1556750f8f71cc3e8043 340 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 267 338 3.6E-16 T 11-11-2016 IPR006260 TonB, C-terminal GO:0006810 ATY42_RS03585 3d95cf37179c795d02c9b219bc2f6e45 61 Gene3D G3DSA:3.40.50.300 1 53 6.4E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03585 3d95cf37179c795d02c9b219bc2f6e45 61 SUPERFAMILY SSF52540 1 54 3.9E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03585 3d95cf37179c795d02c9b219bc2f6e45 61 Pfam PF00005 ABC transporter 21 52 1.7E-6 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 Pfam PF01479 S4 domain 4 48 1.0E-9 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 SUPERFAMILY SSF55120 67 230 4.8E-35 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 226 1.2E-45 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 Gene3D G3DSA:3.10.290.10 3 61 1.0E-19 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 Pfam PF00849 RNA pseudouridylate synthase 70 148 1.5E-12 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 SMART SM00363 3 62 1.3E-8 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS07625 6c4c3081b7853ca34f4d71f2243682b1 240 SUPERFAMILY SSF55174 4 58 3.36E-12 T 11-11-2016 ATY42_RS04325 83198bfe7c2bef83c1d245a1509f1fb6 738 Gene3D G3DSA:2.170.130.10 30 171 6.4E-20 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04325 83198bfe7c2bef83c1d245a1509f1fb6 738 Gene3D G3DSA:2.40.170.20 176 738 1.4E-75 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS04325 83198bfe7c2bef83c1d245a1509f1fb6 738 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 162 4.3E-10 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04325 83198bfe7c2bef83c1d245a1509f1fb6 738 SUPERFAMILY SSF56935 29 738 3.66E-96 T 11-11-2016 ATY42_RS01990 5a1574751350863b6c23c2bf8b754c1b 79 SUPERFAMILY SSF52540 4 77 9.63E-6 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01990 5a1574751350863b6c23c2bf8b754c1b 79 Gene3D G3DSA:3.40.50.300 6 32 2.0E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 SUPERFAMILY SSF49785 34 235 9.21E-53 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 SUPERFAMILY SSF49303 803 879 1.58E-17 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 Gene3D G3DSA:2.60.120.260 27 169 6.0E-32 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 Gene3D G3DSA:2.60.120.260 206 221 6.0E-32 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 SUPERFAMILY SSF51445 344 700 1.7E-106 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 SUPERFAMILY SSF49303 237 345 8.99E-18 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 Gene3D G3DSA:3.20.20.80 346 596 9.3E-68 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 Gene3D G3DSA:3.20.20.80 636 703 9.3E-68 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 Pfam PF00703 Glycosyl hydrolases family 2 237 346 1.0E-7 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 Gene3D G3DSA:2.60.40.320 222 345 7.6E-15 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 ATY42_RS08650 1f489f909a1ba81ba995938acd2f9c76 893 SUPERFAMILY SSF49303 709 801 1.18E-12 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 ATY42_RS12310 1b2a4615ff9f750ef5c8eda5690c6a83 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 371 2.2E-154 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATY42_RS12310 1b2a4615ff9f750ef5c8eda5690c6a83 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 129 365 2.1E-85 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATY42_RS12310 1b2a4615ff9f750ef5c8eda5690c6a83 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 363 56.769 T 11-11-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATY42_RS12310 1b2a4615ff9f750ef5c8eda5690c6a83 381 SUPERFAMILY SSF51713 3 368 1.14E-151 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATY42_RS12310 1b2a4615ff9f750ef5c8eda5690c6a83 381 Gene3D G3DSA:3.20.20.105 2 369 1.4E-158 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATY42_RS12310 1b2a4615ff9f750ef5c8eda5690c6a83 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 371 1.3E-148 T 11-11-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ATY42_RS15635 d3542ea73314adb46b000a368746de7c 193 Gene3D G3DSA:2.40.170.20 28 115 1.3E-7 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS15635 d3542ea73314adb46b000a368746de7c 193 SUPERFAMILY SSF56935 1 93 3.11E-16 T 11-11-2016 ATY42_RS15635 d3542ea73314adb46b000a368746de7c 193 Gene3D G3DSA:2.170.130.10 1 27 1.6E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS15635 d3542ea73314adb46b000a368746de7c 193 Pfam PF07715 TonB-dependent Receptor Plug Domain 1 24 7.5E-6 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06695 a421abddf43d53f176d0162791e9c96a 565 SUPERFAMILY SSF51735 422 553 8.76E-27 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS06695 a421abddf43d53f176d0162791e9c96a 565 Gene3D G3DSA:3.40.50.720 420 553 9.1E-36 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS06695 a421abddf43d53f176d0162791e9c96a 565 Pfam PF00999 Sodium/hydrogen exchanger family 12 391 3.4E-80 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ATY42_RS06695 a421abddf43d53f176d0162791e9c96a 565 Pfam PF02254 TrkA-N domain 425 537 1.9E-21 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ATY42_RS13940 4ea7ece157d7f44fb224fdbbddd14341 425 Pfam PF04966 Carbohydrate-selective porin, OprB family 56 424 2.1E-88 T 11-11-2016 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 ATY42_RS09175 b0f1afe5ad77784cb0095339daa66aa5 309 SUPERFAMILY SSF53098 2 308 1.44E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09175 b0f1afe5ad77784cb0095339daa66aa5 309 Pfam PF01609 Transposase DDE domain 72 308 8.5E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04095 4418af44ce3c813c040658e977238c0f 138 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 1.8E-7 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS04095 4418af44ce3c813c040658e977238c0f 138 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 2.7E-5 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS04095 4418af44ce3c813c040658e977238c0f 138 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS01155 93f36c1316a205bb635e29e61da9e2e5 161 Gene3D G3DSA:3.40.50.1110 22 161 4.4E-44 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS01155 93f36c1316a205bb635e29e61da9e2e5 161 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 26 138 3.0E-8 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS01155 93f36c1316a205bb635e29e61da9e2e5 161 SUPERFAMILY SSF52266 22 161 5.23E-31 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS18815 7753f880f558c85e44597c722c7df2f4 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS18815 7753f880f558c85e44597c722c7df2f4 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS18815 7753f880f558c85e44597c722c7df2f4 332 SMART SM01126 148 293 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS19360 f4040bd4e16a838087a2aec987213f8d 597 Pfam PF03814 Potassium-transporting ATPase A subunit 6 592 2.0E-210 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATY42_RS19360 f4040bd4e16a838087a2aec987213f8d 597 PIRSF PIRSF001294 1 596 2.7E-231 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATY42_RS19360 f4040bd4e16a838087a2aec987213f8d 597 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 201 594 1.0E-119 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATY42_RS19360 f4040bd4e16a838087a2aec987213f8d 597 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 594 27.707 T 11-11-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 Gene3D G3DSA:1.10.287.950 463 667 2.9E-62 T 11-11-2016 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 182 1.5E-17 T 11-11-2016 IPR024478 4HB MCP domain ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 SMART SM00283 448 695 2.6E-86 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 SUPERFAMILY SSF158472 214 265 3.53E-9 T 11-11-2016 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 SUPERFAMILY SSF58104 415 697 9.55E-72 T 11-11-2016 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 501 694 5.8E-62 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 SMART SM00304 395 447 45.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 SMART SM00304 214 266 3.9E-8 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS14220 28b9851c301fdbdf15647dd0e0b0b164 753 Pfam PF00672 HAMP domain 195 262 7.7E-15 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.7E-12 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 98 107 1.7E-12 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 89 97 1.7E-12 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 SUPERFAMILY SSF81330 12 129 1.96E-35 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 11-11-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 134 7.3E-39 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 133 2.4E-43 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS16930 108a3f3bb23dd61af25620ad41103fca 140 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 136 26.173 T 11-11-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Gene3D G3DSA:2.60.40.1120 41 102 2.3E-4 T 11-11-2016 IPR014766 Carboxypeptidase, regulatory domain ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF49452 22 101 2.35E-7 T 11-11-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 235 1.7E-9 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Pfam PF13620 Carboxypeptidase regulatory-like domain 28 102 3.0E-8 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Gene3D G3DSA:2.170.130.10 108 239 4.6E-13 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 556 681 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 296 517 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 973 1059 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 708 757 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 114 258 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 813 857 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 SUPERFAMILY SSF56935 896 939 4.4E-65 T 11-11-2016 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Gene3D G3DSA:2.40.170.20 240 448 3.0E-50 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Gene3D G3DSA:2.40.170.20 586 869 3.0E-50 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Gene3D G3DSA:2.40.170.20 904 1059 3.0E-50 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06005 facedb0b47df423709a878e8368e86c1 1059 Gene3D G3DSA:2.40.170.20 483 538 3.0E-50 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS21505 6ec3dcb446d32434b6e9b582b5467f77 357 Gene3D G3DSA:3.20.20.70 9 352 2.2E-153 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS21505 6ec3dcb446d32434b6e9b582b5467f77 357 Pfam PF00793 DAHP synthetase I family 40 338 2.9E-101 T 11-11-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ATY42_RS21505 6ec3dcb446d32434b6e9b582b5467f77 357 PIRSF PIRSF001361 2 352 1.0E-156 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ATY42_RS21505 6ec3dcb446d32434b6e9b582b5467f77 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 7.8E-161 T 11-11-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ATY42_RS21505 6ec3dcb446d32434b6e9b582b5467f77 357 SUPERFAMILY SSF51569 7 348 7.75E-135 T 11-11-2016 ATY42_RS14960 54440f58f6702d9d7302dfcb52ff4bea 316 Pfam PF00535 Glycosyl transferase family 2 17 130 1.7E-20 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS14960 54440f58f6702d9d7302dfcb52ff4bea 316 Gene3D G3DSA:3.90.550.10 14 250 1.7E-46 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS14960 54440f58f6702d9d7302dfcb52ff4bea 316 SUPERFAMILY SSF53448 16 297 9.38E-48 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 255 267 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 Pfam PF00813 FliP family 82 274 1.7E-71 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 207 222 - T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 82 278 1.1E-75 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 80 99 2.9E-60 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 207 227 2.9E-60 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 119 138 2.9E-60 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 119 2.9E-60 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 228 249 2.9E-60 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 252 277 2.9E-60 T 11-11-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 178 190 8.7E-17 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 268 278 8.7E-17 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 200 212 8.7E-17 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 78 87 8.7E-17 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 138 150 8.7E-17 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS12945 cc771938609642d42d12438dc658ca88 281 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 164 8.7E-17 T 11-11-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 PRINTS PR01021 OMPA domain signature 99 114 6.6E-13 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 PRINTS PR01021 OMPA domain signature 69 91 6.6E-13 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 PRINTS PR01021 OMPA domain signature 114 130 6.6E-13 T 11-11-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 SUPERFAMILY SSF103088 65 169 1.02E-31 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 67 169 1.2E-42 T 11-11-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 Pfam PF00691 OmpA family 68 163 1.6E-16 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS08240 92f6ac9130adb9272da1c079fdf74e03 172 Gene3D G3DSA:3.30.1330.60 66 170 2.3E-31 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 SUPERFAMILY SSF47819 293 359 8.94E-11 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 SUPERFAMILY SSF53098 2 192 4.55E-56 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 Gene3D G3DSA:3.30.420.10 5 188 5.1E-17 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 Hamap MF_01899 Ribonuclease D [rnd]. 2 359 36.914 T 11-11-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 TIGRFAM TIGR01388 rnd: ribonuclease D 4 358 1.7E-117 T 11-11-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 SMART SM00474 2 169 1.2E-32 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 Pfam PF01612 3'-5' exonuclease 4 168 7.5E-30 T 11-11-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 SUPERFAMILY SSF47819 194 284 1.16E-15 T 11-11-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 ATY42_RS13585 84e50ed5f7dfa6b86f3412bf867564af 363 Pfam PF00570 HRDC domain 213 258 9.1E-6 T 11-11-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 ATY42_RS21950 6bcbb07a488b84e49a36069d2e51452d 185 SUPERFAMILY SSF53098 9 143 1.44E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21950 6bcbb07a488b84e49a36069d2e51452d 185 Pfam PF01609 Transposase DDE domain 25 113 2.5E-11 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11495 ad2ec4e7ba0be34d81206f55e21f525d 205 Pfam PF01609 Transposase DDE domain 31 163 3.4E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 3.3E-133 T 11-11-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 1.0E-64 T 11-11-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 152 7.4E-61 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.0E-47 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.0E-47 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 5.0E-47 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 5.0E-47 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 5.0E-47 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 Gene3D G3DSA:3.30.360.10 161 316 3.0E-80 T 11-11-2016 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 Gene3D G3DSA:3.40.50.720 3 160 1.1E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 SUPERFAMILY SSF55347 151 314 4.17E-73 T 11-11-2016 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 PIRSF PIRSF000149 1 333 1.5E-129 T 11-11-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-11-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 SUPERFAMILY SSF51735 3 168 1.51E-67 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS05865 0c855e33de19c784dafc0bf8e8890f23 333 SMART SM00846 3 152 2.0E-98 T 11-11-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 Gene3D G3DSA:3.40.50.300 14 117 9.3E-4 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 SUPERFAMILY SSF52540 1 142 2.45E-39 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 Hamap MF_00124 Thymidine kinase [tdk]. 1 190 33.099 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 Gene3D G3DSA:3.30.60.20 143 190 3.8E-11 T 11-11-2016 ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 Pfam PF00265 Thymidine kinase 2 185 4.0E-48 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 SUPERFAMILY SSF57716 143 195 2.85E-13 T 11-11-2016 ATY42_RS01060 80a3cbfe24559d73352db4c2dab2294a 209 PIRSF PIRSF035805 1 197 4.1E-50 T 11-11-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-73614 ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1261 1341 3.1E-13 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF15523 Novel toxin 16 1415 1491 1.1E-9 T 11-11-2016 IPR029118 Novel toxin 16 ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 271 306 0.0019 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 859 893 7.0E-4 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 838 878 1.6E-8 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 691 724 1.3E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 812 837 0.0034 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 292 333 9.0E-5 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 633 664 6.5E-5 T 11-11-2016 IPR006530 YD repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 751 784 6.6E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 704 735 1.3E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 793 831 4.4E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 633 664 1.8E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 838 875 2.1E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 1050 1088 5.6E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 867 893 3.0E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS07720 476cdaf12e1867bf1e2f0f32e27b3bda 1496 Pfam PF05593 RHS Repeat 683 720 2.1E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS22855 b1b09abc988f9b10c0cea7cdc4970b1e 575 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 182 207 - T 11-11-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 ATY42_RS22855 b1b09abc988f9b10c0cea7cdc4970b1e 575 Pfam PF00474 Sodium:solute symporter family 67 492 6.6E-108 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ATY42_RS22855 b1b09abc988f9b10c0cea7cdc4970b1e 575 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 67 492 1.9E-58 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ATY42_RS20575 258d415fbfaa4df5e1e0537c8f5f2720 158 Pfam PF01609 Transposase DDE domain 1 155 4.9E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07805 ccf2f420d3ae49301dd740ee368b8b59 86 SUPERFAMILY SSF140931 3 78 2.22E-14 T 11-11-2016 IPR003812 Fido domain ATY42_RS07805 ccf2f420d3ae49301dd740ee368b8b59 86 Gene3D G3DSA:1.10.3290.10 4 80 2.2E-17 T 11-11-2016 IPR003812 Fido domain ATY42_RS07805 ccf2f420d3ae49301dd740ee368b8b59 86 Pfam PF02661 Fic/DOC family 3 33 2.4E-5 T 11-11-2016 IPR003812 Fido domain ATY42_RS01015 8217e853d855dc03702599f1fa160a35 301 SUPERFAMILY SSF51197 81 230 2.2E-21 T 11-11-2016 ATY42_RS01015 8217e853d855dc03702599f1fa160a35 301 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 71 224 3.6E-48 T 11-11-2016 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 ATY42_RS01015 8217e853d855dc03702599f1fa160a35 301 Gene3D G3DSA:2.60.120.330 123 224 3.2E-17 T 11-11-2016 IPR027443 Isopenicillin N synthase-like ATY42_RS22250 e737940206f2fd1c6438591b06a96040 472 Pfam PF02614 Glucuronate isomerase 22 468 1.6E-70 T 11-11-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 ATY42_RS22250 e737940206f2fd1c6438591b06a96040 472 Gene3D G3DSA:3.20.20.140 154 472 5.5E-149 T 11-11-2016 ATY42_RS22250 e737940206f2fd1c6438591b06a96040 472 Gene3D G3DSA:3.20.20.140 7 51 5.5E-149 T 11-11-2016 ATY42_RS22250 e737940206f2fd1c6438591b06a96040 472 SUPERFAMILY SSF51556 8 471 3.2E-155 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS22250 e737940206f2fd1c6438591b06a96040 472 Gene3D G3DSA:1.10.2020.10 53 153 3.3E-30 T 11-11-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 ATY42_RS22250 e737940206f2fd1c6438591b06a96040 472 Hamap MF_00675 Uronate isomerase [uxaC]. 5 472 39.547 T 11-11-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 ATY42_RS19970 e08becff6f136f0e1ea9b0a6a22f0274 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 11-11-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ATY42_RS19970 e08becff6f136f0e1ea9b0a6a22f0274 310 SUPERFAMILY SSF53613 2 296 2.96E-63 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS19970 e08becff6f136f0e1ea9b0a6a22f0274 310 Gene3D G3DSA:3.40.1190.20 2 304 1.5E-54 T 11-11-2016 IPR029056 Ribokinase-like ATY42_RS19970 e08becff6f136f0e1ea9b0a6a22f0274 310 Pfam PF00294 pfkB family carbohydrate kinase 36 290 7.6E-37 T 11-11-2016 IPR011611 Carbohydrate kinase PfkB ATY42_RS01665 b8bbeff5165ebe36b6f4ca9b3acd9a0a 130 SUPERFAMILY SSF46689 2 66 1.16E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01665 b8bbeff5165ebe36b6f4ca9b3acd9a0a 130 Gene3D G3DSA:1.10.10.60 8 83 2.3E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS01665 b8bbeff5165ebe36b6f4ca9b3acd9a0a 130 Pfam PF01527 Transposase 2 70 1.6E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS06580 b8bbeff5165ebe36b6f4ca9b3acd9a0a 130 SUPERFAMILY SSF46689 2 66 1.16E-11 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06580 b8bbeff5165ebe36b6f4ca9b3acd9a0a 130 Gene3D G3DSA:1.10.10.60 8 83 2.3E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06580 b8bbeff5165ebe36b6f4ca9b3acd9a0a 130 Pfam PF01527 Transposase 2 70 1.6E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Gene3D G3DSA:1.10.10.10 21 75 2.0E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Pfam PF02237 Biotin protein ligase C terminal domain 291 336 1.0E-4 T 11-11-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 SUPERFAMILY SSF46785 21 73 1.1E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 104 335 9.2E-45 T 11-11-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 19 336 30.184 T 11-11-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 119 226 1.6E-8 T 11-11-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 SUPERFAMILY SSF55681 101 287 1.26E-46 T 11-11-2016 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Pfam PF08279 HTH domain 26 71 2.4E-10 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Gene3D G3DSA:3.30.930.10 100 287 7.5E-47 T 11-11-2016 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 Gene3D G3DSA:2.30.30.100 291 338 2.2E-11 T 11-11-2016 ATY42_RS01960 7e719737d522200a24df66cf6c184835 338 SUPERFAMILY SSF50037 292 336 1.65E-6 T 11-11-2016 IPR008988 Transcriptional repressor, C-terminal ATY42_RS12755 c137bafc60f96d17e0163a770ca6f237 407 Pfam PF07559 Flagellar basal body protein FlaE 177 288 6.6E-22 T 11-11-2016 IPR011491 Flagellar hook protein FlgE ATY42_RS12755 c137bafc60f96d17e0163a770ca6f237 407 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 389 1.0E-107 T 11-11-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G ATY42_RS12755 c137bafc60f96d17e0163a770ca6f237 407 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site ATY42_RS12755 c137bafc60f96d17e0163a770ca6f237 407 Pfam PF00460 Flagella basal body rod protein 3 33 1.1E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATY42_RS12755 c137bafc60f96d17e0163a770ca6f237 407 SUPERFAMILY SSF117143 79 368 1.44E-75 T 11-11-2016 ATY42_RS12755 c137bafc60f96d17e0163a770ca6f237 407 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 328 406 2.7E-19 T 11-11-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 SUPERFAMILY SSF110997 104 165 6.41E-10 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 Gene3D G3DSA:3.30.70.1070 99 168 4.8E-14 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 Gene3D G3DSA:3.30.70.1070 279 357 1.7E-19 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 SUPERFAMILY SSF110997 284 357 9.68E-16 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 PRINTS PR01217 Proline rich extensin signature 271 283 1.0E-9 T 11-11-2016 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 PRINTS PR01217 Proline rich extensin signature 90 102 1.0E-9 T 11-11-2016 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 PRINTS PR01217 Proline rich extensin signature 210 227 1.0E-9 T 11-11-2016 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 PRINTS PR01217 Proline rich extensin signature 234 259 1.0E-9 T 11-11-2016 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 PRINTS PR01217 Proline rich extensin signature 187 203 1.0E-9 T 11-11-2016 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 Pfam PF05036 Sporulation related domain 102 179 4.8E-15 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS18525 3fad04457f22054a0ae5d23eeae995ee 360 Pfam PF05036 Sporulation related domain 285 357 1.4E-16 T 11-11-2016 IPR007730 Sporulation-related domain GO:0042834 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 Gene3D G3DSA:1.20.1260.10 1 156 1.4E-51 T 11-11-2016 IPR012347 Ferritin-related ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PRINTS PR00601 Bacterioferritin signature 3 22 6.0E-37 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PRINTS PR00601 Bacterioferritin signature 106 126 6.0E-37 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PRINTS PR00601 Bacterioferritin signature 44 64 6.0E-37 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PRINTS PR00601 Bacterioferritin signature 23 43 6.0E-37 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PRINTS PR00601 Bacterioferritin signature 85 105 6.0E-37 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PRINTS PR00601 Bacterioferritin signature 128 149 6.0E-37 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 Pfam PF00210 Ferritin-like domain 9 144 8.0E-35 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 PIRSF PIRSF002560 1 157 2.4E-58 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 SUPERFAMILY SSF47240 1 156 4.07E-43 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS09700 94cb47d576a4550e842cc24c8f67a7a4 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 154 2.1E-39 T 11-11-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 ATY42_RS23145 cc803997c5e1d13a6cbc3008ec5bc24f 207 Pfam PF02321 Outer membrane efflux protein 86 186 4.3E-10 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS23145 cc803997c5e1d13a6cbc3008ec5bc24f 207 Gene3D G3DSA:1.20.1600.10 83 196 2.3E-22 T 11-11-2016 ATY42_RS23145 cc803997c5e1d13a6cbc3008ec5bc24f 207 SUPERFAMILY SSF56954 84 196 1.07E-19 T 11-11-2016 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Gene3D G3DSA:3.30.450.20 230 350 9.4E-10 T 11-11-2016 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SUPERFAMILY SSF55785 102 217 6.73E-14 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SUPERFAMILY SSF55785 350 473 3.14E-17 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SMART SM00387 607 699 7.5E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Pfam PF08448 PAS fold 120 220 9.4E-7 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Gene3D G3DSA:3.30.450.20 103 217 6.1E-15 T 11-11-2016 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SUPERFAMILY SSF55785 222 351 2.79E-8 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Pfam PF13426 PAS domain 259 352 0.76 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Pfam PF13426 PAS domain 375 475 4.1E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 659 677 6.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 683 696 6.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 658 6.8E-9 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 611 697 7.6E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Pfam PF07730 Histidine kinase 504 569 2.7E-12 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Gene3D G3DSA:3.30.565.10 605 698 1.4E-12 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SMART SM00091 235 301 220.0 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SMART SM00091 106 177 3.7E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SMART SM00091 365 430 6.2E-6 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 SUPERFAMILY SSF55874 573 696 2.23E-21 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 Gene3D G3DSA:3.30.450.20 351 472 1.5E-16 T 11-11-2016 ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 361 483 4.0E-15 T 11-11-2016 IPR000014 PAS domain ATY42_RS12705 fe595a187559717e37194c9f0264f092 710 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 107 211 8.5E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS22670 894c487a86ca434001add345c6a20327 110 Gene3D G3DSA:1.10.238.10 51 106 1.8E-5 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS22670 894c487a86ca434001add345c6a20327 110 SUPERFAMILY SSF47473 24 107 9.06E-14 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS22670 894c487a86ca434001add345c6a20327 110 ProSitePatterns PS00018 EF-hand calcium-binding domain. 56 68 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS22670 894c487a86ca434001add345c6a20327 110 ProSitePatterns PS00018 EF-hand calcium-binding domain. 93 105 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS22670 894c487a86ca434001add345c6a20327 110 Gene3D G3DSA:1.10.238.10 22 49 6.9E-10 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS22670 894c487a86ca434001add345c6a20327 110 ProSitePatterns PS00018 EF-hand calcium-binding domain. 32 44 - T 11-11-2016 IPR018247 EF-Hand 1, calcium-binding site ATY42_RS22670 894c487a86ca434001add345c6a20327 110 Pfam PF13202 EF hand 89 105 0.011 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS22670 894c487a86ca434001add345c6a20327 110 Pfam PF13202 EF hand 26 44 5.9E-5 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 7.3E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 7.3E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 SUPERFAMILY SSF48498 83 207 1.42E-29 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 SUPERFAMILY SSF46689 8 76 2.62E-18 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 11-11-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.9E-14 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS12570 fe7c5a46cfae7bee19d1419afd3d45a8 210 Gene3D G3DSA:1.10.357.10 8 206 1.5E-38 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS11910 ee3290c34c2f1742bbb86409b9dd35bf 285 TIGRFAM TIGR02017 hutG_amidohyd: N-formylglutamate deformylase 6 272 2.3E-129 T 11-11-2016 IPR010247 N-formylglutamate deformylase ATY42_RS11910 ee3290c34c2f1742bbb86409b9dd35bf 285 Pfam PF05013 N-formylglutamate amidohydrolase 15 233 1.4E-66 T 11-11-2016 IPR007709 N-formylglutamate amidohydrolase ATY42_RS11910 ee3290c34c2f1742bbb86409b9dd35bf 285 Gene3D G3DSA:3.40.630.40 2 271 1.0E-90 T 11-11-2016 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ATY42_RS11910 ee3290c34c2f1742bbb86409b9dd35bf 285 SUPERFAMILY SSF53187 5 268 4.55E-78 T 11-11-2016 ATY42_RS12345 5c4fca6e41a6751b232a70a1d4f481c1 74 SUPERFAMILY SSF56300 2 66 1.71E-8 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS12345 5c4fca6e41a6751b232a70a1d4f481c1 74 Gene3D G3DSA:3.60.21.10 2 64 4.6E-10 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS00750 1467abbce985fb1709ea7ca298c725d6 396 Gene3D G3DSA:3.40.50.720 21 199 4.9E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00750 1467abbce985fb1709ea7ca298c725d6 396 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 22 145 3.4E-11 T 11-11-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ATY42_RS00750 1467abbce985fb1709ea7ca298c725d6 396 SUPERFAMILY SSF51735 19 156 1.12E-12 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS18410 b17ef7fd8c89015caa4d9aedcf681a31 375 SUPERFAMILY SSF53098 7 341 1.37E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS18410 b17ef7fd8c89015caa4d9aedcf681a31 375 Pfam PF13546 DDE superfamily endonuclease 1 227 6.4E-76 T 11-11-2016 ATY42_RS23230 ff17f6aed9f08533a03a3096330ebb49 389 SUPERFAMILY SSF110738 1 375 7.72E-138 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATY42_RS23230 ff17f6aed9f08533a03a3096330ebb49 389 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.7E-154 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATY42_RS23230 ff17f6aed9f08533a03a3096330ebb49 389 PIRSF PIRSF006078 1 377 7.6E-134 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATY42_RS23230 ff17f6aed9f08533a03a3096330ebb49 389 Gene3D G3DSA:3.90.1510.10 42 275 1.2E-96 T 11-11-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 ATY42_RS23230 ff17f6aed9f08533a03a3096330ebb49 389 Pfam PF02595 Glycerate kinase family 3 373 3.6E-148 T 11-11-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ATY42_RS19420 2f1cfd026903c1e6b7b6d0af5dbcd4ce 161 Pfam PF00583 Acetyltransferase (GNAT) family 65 137 1.3E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS19420 2f1cfd026903c1e6b7b6d0af5dbcd4ce 161 SUPERFAMILY SSF55729 8 141 2.79E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS19420 2f1cfd026903c1e6b7b6d0af5dbcd4ce 161 Gene3D G3DSA:3.40.630.30 12 138 1.5E-23 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS01845 937290095017e35bd04dcd47fcbb5294 250 SMART SM00892 49 239 7.7E-33 T 11-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ATY42_RS01845 937290095017e35bd04dcd47fcbb5294 250 SUPERFAMILY SSF54060 26 247 4.36E-56 T 11-11-2016 ATY42_RS01845 937290095017e35bd04dcd47fcbb5294 250 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 111 119 - T 11-11-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 ATY42_RS01845 937290095017e35bd04dcd47fcbb5294 250 Gene3D G3DSA:3.40.570.10 26 244 9.6E-54 T 11-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 ATY42_RS01845 937290095017e35bd04dcd47fcbb5294 250 Pfam PF01223 DNA/RNA non-specific endonuclease 45 233 3.7E-43 T 11-11-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 ATY42_RS01845 937290095017e35bd04dcd47fcbb5294 250 SMART SM00477 50 239 8.2E-25 T 11-11-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 ATY42_RS00705 e9dd2c46d3b2d8d1524462b2ff1a2fd9 123 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 2 78 1.7E-11 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ATY42_RS04380 68e7fa3b32abc9e7377dcb0fb277486c 158 Gene3D G3DSA:2.60.40.790 12 146 1.7E-43 T 11-11-2016 IPR008978 HSP20-like chaperone ATY42_RS04380 68e7fa3b32abc9e7377dcb0fb277486c 158 Pfam PF00011 Hsp20/alpha crystallin family 47 146 9.1E-25 T 11-11-2016 IPR002068 Alpha crystallin/Hsp20 domain ATY42_RS04380 68e7fa3b32abc9e7377dcb0fb277486c 158 SUPERFAMILY SSF49764 22 146 4.88E-39 T 11-11-2016 IPR008978 HSP20-like chaperone ATY42_RS16770 991394ec25ff4b6e6300f1fd14f92ac9 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS16770 991394ec25ff4b6e6300f1fd14f92ac9 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS14975 375e10eeda484f6783836aac825696d0 310 Pfam PF13480 Acetyltransferase (GNAT) domain 158 279 1.9E-11 T 11-11-2016 ATY42_RS14975 375e10eeda484f6783836aac825696d0 310 Gene3D G3DSA:3.40.630.30 153 299 3.4E-20 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS14975 375e10eeda484f6783836aac825696d0 310 SUPERFAMILY SSF55729 152 302 1.84E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS11365 45a837d8ec5e2656dd781310b9fddb1f 259 Gene3D G3DSA:3.90.550.10 9 256 7.7E-74 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS11365 45a837d8ec5e2656dd781310b9fddb1f 259 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 7 257 39.093 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ATY42_RS11365 45a837d8ec5e2656dd781310b9fddb1f 259 SUPERFAMILY SSF53448 9 255 6.08E-57 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS11365 45a837d8ec5e2656dd781310b9fddb1f 259 Pfam PF02348 Cytidylyltransferase 11 230 1.5E-47 T 11-11-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 ATY42_RS11365 45a837d8ec5e2656dd781310b9fddb1f 259 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 9 249 3.1E-77 T 11-11-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 ATY42_RS00815 b98768bf808e8f7bef7c6f5917f252b7 460 Pfam PF01609 Transposase DDE domain 283 418 2.6E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00815 b98768bf808e8f7bef7c6f5917f252b7 460 Pfam PF05598 Transposase domain (DUF772) 59 132 3.8E-15 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 PIRSF PIRSF006337 7 582 6.6E-219 T 11-11-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902 ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 Gene3D G3DSA:2.60.40.10 16 93 2.1E-26 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 SUPERFAMILY SSF81296 8 93 1.98E-19 T 11-11-2016 IPR014756 Immunoglobulin E-set ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 Gene3D G3DSA:3.20.20.80 468 506 7.9E-76 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 Gene3D G3DSA:3.20.20.80 101 427 7.9E-76 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 Pfam PF00128 Alpha amylase, catalytic domain 125 213 4.4E-13 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 Pfam PF11941 Domain of unknown function (DUF3459) 496 561 1.1E-6 T 11-11-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 SUPERFAMILY SSF51445 96 506 1.67E-97 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 SMART SM00642 96 453 1.1E-7 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 21 552 5.8E-213 T 11-11-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902 ATY42_RS00335 fd17477b507dd18806fafdcd074c6b23 585 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 73 1.8E-5 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 PIRSF PIRSF000370 16 227 7.3E-69 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 18 224 36.515 T 11-11-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 Pfam PF04055 Radical SAM superfamily 41 118 7.6E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 SUPERFAMILY SSF102114 42 117 1.29E-14 T 11-11-2016 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 Pfam PF13394 4Fe-4S single cluster domain 39 121 1.8E-10 T 11-11-2016 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 Gene3D G3DSA:3.20.20.70 44 117 9.2E-14 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS08250 41bcc584387f52b56c234c724bdba782 227 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 18 227 1.5E-111 T 11-11-2016 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 20 199 3.7E-31 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 Gene3D G3DSA:1.10.150.240 34 91 1.5E-5 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 20 225 2.2E-76 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 2.3E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 2.3E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 2.3E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 17 28 2.3E-5 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 SUPERFAMILY SSF56784 18 226 1.87E-53 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 Gene3D G3DSA:3.40.50.1000 18 33 1.6E-39 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 Gene3D G3DSA:3.40.50.1000 92 226 1.6E-39 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 83 192 2.8E-9 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS13365 33e638a0b05e1fb981058def54cb8f21 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 199 1.5E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS10565 bb3c14363143eddf84a46195d96fa198 278 SUPERFAMILY SSF161098 8 278 1.78E-72 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS10565 bb3c14363143eddf84a46195d96fa198 278 Gene3D G3DSA:1.10.3720.10 7 265 5.4E-64 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS10565 bb3c14363143eddf84a46195d96fa198 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 266 4.7E-21 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS15820 875a1eb4da212d50b7b14d62d380675a 129 SUPERFAMILY SSF53335 6 125 4.97E-20 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS15820 875a1eb4da212d50b7b14d62d380675a 129 Pfam PF10294 Lysine methyltransferase 5 110 6.5E-15 T 11-11-2016 IPR019410 Lysine methyltransferase ATY42_RS15820 875a1eb4da212d50b7b14d62d380675a 129 Gene3D G3DSA:3.40.50.150 6 115 1.1E-30 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS18430 7c9baa784fb21007f348301af5ade9bd 193 SUPERFAMILY SSF55781 23 147 1.04E-6 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS18430 7c9baa784fb21007f348301af5ade9bd 193 Gene3D G3DSA:3.30.450.40 15 180 2.4E-14 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS00980 1dc783fcd1b52eac15ce82c8b95e2b90 733 SUPERFAMILY SSF53474 215 300 2.98E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS00980 1dc783fcd1b52eac15ce82c8b95e2b90 733 Gene3D G3DSA:3.40.50.1820 213 297 1.1E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS00980 1dc783fcd1b52eac15ce82c8b95e2b90 733 Gene3D G3DSA:3.40.50.1820 363 389 1.1E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS00980 1dc783fcd1b52eac15ce82c8b95e2b90 733 Pfam PF11678 Protein of unknown function (DUF3274) 418 708 8.6E-69 T 11-11-2016 IPR021692 Protein of unknown function DUF3274 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 SUPERFAMILY SSF51905 12 235 4.47E-17 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 199 217 2.0E-6 T 11-11-2016 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.0E-6 T 11-11-2016 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.0E-6 T 11-11-2016 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 Pfam PF13454 FAD-NAD(P)-binding 13 164 1.5E-31 T 11-11-2016 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 Gene3D G3DSA:3.50.50.60 103 238 3.1E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS22965 c9312261fefac8e8117e3b5b533c526d 464 Gene3D G3DSA:3.50.50.60 12 63 3.1E-11 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 SUPERFAMILY SSF46785 9 152 3.51E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 Pfam PF12802 MarR family 45 104 4.5E-12 T 11-11-2016 ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 130 150 1.7E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 1.7E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 1.7E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 1.7E-10 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 Gene3D G3DSA:1.10.10.10 5 152 7.4E-40 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 11-11-2016 IPR023187 Transcriptional regulator MarR-type, conserved site ATY42_RS20485 9ac159cc1049bb04f358b1763e905368 162 SMART SM00347 40 140 4.6E-16 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS08060 51df495048c875863cd3199b9c376f5e 198 Pfam PF14435 SUKH-4 immunity protein 24 192 9.6E-8 T 11-11-2016 IPR025851 SUKH-4 immunity protein ATY42_RS08070 51df495048c875863cd3199b9c376f5e 198 Pfam PF14435 SUKH-4 immunity protein 24 192 9.6E-8 T 11-11-2016 IPR025851 SUKH-4 immunity protein ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 SUPERFAMILY SSF54211 10 116 4.8E-25 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 62 108 5.0E-20 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 10 118 18.102 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 Pfam PF00825 Ribonuclease P 10 115 1.9E-25 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 14 116 1.9E-19 T 11-11-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 Gene3D G3DSA:3.30.230.10 9 117 9.3E-29 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS23295 283d4409e9bb7461a499ae1a2e62f3e6 145 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 59 73 - T 11-11-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 ATY42_RS07745 ae683303d6098392627df20a72a482d7 318 Pfam PF13936 Helix-turn-helix domain 3 45 3.0E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS07745 ae683303d6098392627df20a72a482d7 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS07745 ae683303d6098392627df20a72a482d7 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07745 ae683303d6098392627df20a72a482d7 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16020 fb540414eb20384df8c8b824e7893e1b 75 Gene3D G3DSA:3.30.420.10 9 65 1.2E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16020 fb540414eb20384df8c8b824e7893e1b 75 Pfam PF13683 Integrase core domain 7 65 7.2E-18 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS16020 fb540414eb20384df8c8b824e7893e1b 75 SUPERFAMILY SSF53098 11 73 9.56E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05955 04100c6f371ef44e7af39c85dc01efbd 307 Gene3D G3DSA:2.40.170.20 7 182 3.7E-22 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05955 04100c6f371ef44e7af39c85dc01efbd 307 Pfam PF00593 TonB dependent receptor 54 187 3.0E-10 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS05955 04100c6f371ef44e7af39c85dc01efbd 307 SUPERFAMILY SSF56935 8 193 4.4E-23 T 11-11-2016 ATY42_RS14790 35f04f6d86287d5ab1d2b9c2f22577cf 163 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 39 54 - T 11-11-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATY42_RS14790 35f04f6d86287d5ab1d2b9c2f22577cf 163 Pfam PF02542 YgbB family 5 158 7.6E-64 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATY42_RS14790 35f04f6d86287d5ab1d2b9c2f22577cf 163 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 6 159 5.3E-69 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATY42_RS14790 35f04f6d86287d5ab1d2b9c2f22577cf 163 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 5 160 35.71 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATY42_RS14790 35f04f6d86287d5ab1d2b9c2f22577cf 163 Gene3D G3DSA:3.30.1330.50 3 160 5.3E-70 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATY42_RS14790 35f04f6d86287d5ab1d2b9c2f22577cf 163 SUPERFAMILY SSF69765 4 160 1.18E-64 T 11-11-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ATY42_RS14590 9904f33a4033d3e8a80cac2e7a86adf3 160 SUPERFAMILY SSF52833 13 157 8.75E-46 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS14590 9904f33a4033d3e8a80cac2e7a86adf3 160 Gene3D G3DSA:3.40.30.10 19 156 9.8E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS14590 9904f33a4033d3e8a80cac2e7a86adf3 160 Pfam PF00578 AhpC/TSA family 10 135 3.8E-31 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATY42_RS19930 0f024995ba49effc8465dfc0ca817241 318 Pfam PF13936 Helix-turn-helix domain 3 45 2.3E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS19930 0f024995ba49effc8465dfc0ca817241 318 Pfam PF00665 Integrase core domain 173 267 1.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS19930 0f024995ba49effc8465dfc0ca817241 318 SUPERFAMILY SSF53098 163 308 1.17E-20 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19930 0f024995ba49effc8465dfc0ca817241 318 Gene3D G3DSA:3.30.420.10 165 307 7.3E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 19 373 40.253 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 Pfam PF00072 Response regulator receiver domain 22 123 1.6E-23 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 SMART SM00448 19 142 3.4E-21 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 PIRSF PIRSF000876 16 373 4.1E-133 T 11-11-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 SUPERFAMILY SSF52738 185 371 1.96E-70 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 Gene3D G3DSA:3.40.50.2300 14 149 2.6E-29 T 11-11-2016 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 Pfam PF01339 CheB methylesterase 190 368 9.8E-61 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 Gene3D G3DSA:3.40.50.180 184 372 6.1E-82 T 11-11-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ATY42_RS07245 51ba257be356bf294a1b7187eefd4b98 373 SUPERFAMILY SSF52172 17 150 2.13E-27 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS11720 52c7c1e36f2f7594689547875d646b7b 207 SUPERFAMILY SSF52540 4 156 2.09E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11720 52c7c1e36f2f7594689547875d646b7b 207 Gene3D G3DSA:3.40.50.300 3 135 1.7E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19320 504c3b9e4142b723f4b9f94f30eff61c 576 SUPERFAMILY SSF53822 250 572 2.83E-62 T 11-11-2016 IPR028082 Periplasmic binding protein-like I ATY42_RS19320 504c3b9e4142b723f4b9f94f30eff61c 576 Pfam PF04348 LppC putative lipoprotein 43 567 4.6E-119 T 11-11-2016 IPR007443 Penicillin-binding protein activator LpoA ATY42_RS19320 504c3b9e4142b723f4b9f94f30eff61c 576 Gene3D G3DSA:3.40.50.2300 249 357 1.9E-36 T 11-11-2016 ATY42_RS19320 504c3b9e4142b723f4b9f94f30eff61c 576 Gene3D G3DSA:3.40.50.2300 489 557 1.9E-36 T 11-11-2016 ATY42_RS19320 504c3b9e4142b723f4b9f94f30eff61c 576 Gene3D G3DSA:3.40.50.2300 358 488 2.3E-23 T 11-11-2016 ATY42_RS10220 a762a8190b5b27fbb8ac6317b0989312 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS10220 a762a8190b5b27fbb8ac6317b0989312 332 SMART SM01126 148 293 2.4E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10220 a762a8190b5b27fbb8ac6317b0989312 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.7E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS14365 48440716e15a1675b64ba32bd6b20c69 233 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 50 94 2.5E-9 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS01160 b2facd492dc629c26d710230efade6d0 214 Pfam PF14300 Domain of unknown function (DUF4375) 98 204 3.2E-11 T 11-11-2016 IPR025402 Domain of unknown function DUF4375 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 Gene3D G3DSA:3.20.20.70 7 293 3.2E-89 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 3.2E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 3.2E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 3.2E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 3.2E-12 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 PIRSF PIRSF001365 4 301 3.1E-75 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 SUPERFAMILY SSF51569 6 293 2.41E-83 T 11-11-2016 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 SMART SM01130 6 295 3.0E-93 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS15740 5fa6889e3260ad491c9afe08f33379d3 302 Pfam PF00701 Dihydrodipicolinate synthetase family 8 292 3.9E-59 T 11-11-2016 IPR002220 DapA-like GO:0008152|GO:0016829 ATY42_RS08180 6549379fb63b24efd722fc65d3c32526 175 Pfam PF13673 Acetyltransferase (GNAT) domain 31 151 1.1E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS08180 6549379fb63b24efd722fc65d3c32526 175 Gene3D G3DSA:3.40.630.30 1 158 1.7E-38 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS08180 6549379fb63b24efd722fc65d3c32526 175 SUPERFAMILY SSF55729 2 158 6.62E-33 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS10780 68074395863d96300d1ddb4e4c730d67 194 SUPERFAMILY SSF53098 7 181 1.9E-45 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10780 68074395863d96300d1ddb4e4c730d67 194 Pfam PF00929 Exonuclease 12 173 1.7E-26 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS10780 68074395863d96300d1ddb4e4c730d67 194 Hamap MF_00045 Oligoribonuclease [orn]. 6 184 40.952 T 11-11-2016 IPR022894 Oligoribonuclease GO:0016788 ATY42_RS10780 68074395863d96300d1ddb4e4c730d67 194 SMART SM00479 10 183 9.0E-14 T 11-11-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III ATY42_RS10780 68074395863d96300d1ddb4e4c730d67 194 Gene3D G3DSA:3.30.420.10 8 179 1.1E-68 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS23150 2a1e0a5a3281765abb24d9bbf0633add 188 Pfam PF04632 Fusaric acid resistance protein family 10 66 1.0E-22 T 11-11-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 ATY42_RS23150 2a1e0a5a3281765abb24d9bbf0633add 188 Pfam PF04632 Fusaric acid resistance protein family 69 166 1.2E-12 T 11-11-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 ATY42_RS19830 050080f68ab6b225be8c763958cac656 126 Pfam PF05433 Glycine zipper 2TM domain 66 107 2.6E-10 T 11-11-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ATY42_RS03650 7a0a401b5920ed0a5211d61bee45c79f 367 SUPERFAMILY SSF53686 5 338 4.45E-65 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS03650 7a0a401b5920ed0a5211d61bee45c79f 367 Gene3D G3DSA:3.40.50.1100 143 337 6.6E-34 T 11-11-2016 ATY42_RS03650 7a0a401b5920ed0a5211d61bee45c79f 367 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 320 2.2E-45 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS03650 7a0a401b5920ed0a5211d61bee45c79f 367 Gene3D G3DSA:3.40.50.1100 47 142 1.1E-22 T 11-11-2016 ATY42_RS06715 e0b0f9bfc58970417897531ee47b5cc2 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 128 1.1E-9 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS06715 e0b0f9bfc58970417897531ee47b5cc2 146 Gene3D G3DSA:3.10.180.10 11 132 2.3E-24 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS06715 e0b0f9bfc58970417897531ee47b5cc2 146 SUPERFAMILY SSF54593 12 133 2.42E-18 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS00130 b925a2352d205650b6f0fbff23102062 402 Gene3D G3DSA:3.40.50.720 178 265 1.1E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00130 b925a2352d205650b6f0fbff23102062 402 Gene3D G3DSA:3.40.50.720 42 145 1.1E-4 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00130 b925a2352d205650b6f0fbff23102062 402 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 1.8E-31 T 11-11-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS00130 b925a2352d205650b6f0fbff23102062 402 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 56.356 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS00130 b925a2352d205650b6f0fbff23102062 402 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 79 4.0E-35 T 11-11-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS00130 b925a2352d205650b6f0fbff23102062 402 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 318 4.3E-109 T 11-11-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS12500 73e51d57bf10343a3627be74c9e0fb6a 56 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 55 1.7E-13 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS22980 15ddcdd20eddc41a6b9106ea74be8aec 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS22980 15ddcdd20eddc41a6b9106ea74be8aec 332 SMART SM01126 148 293 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22980 15ddcdd20eddc41a6b9106ea74be8aec 332 Pfam PF12762 ISXO2-like transposase domain 148 293 3.3E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21195 1a282765f333f69e950855283b352f84 338 Gene3D G3DSA:3.40.47.10 188 338 4.9E-28 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS21195 1a282765f333f69e950855283b352f84 338 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 333 1.6E-18 T 11-11-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS21195 1a282765f333f69e950855283b352f84 338 Gene3D G3DSA:3.40.47.10 4 187 2.5E-35 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS21195 1a282765f333f69e950855283b352f84 338 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 117 195 1.2E-7 T 11-11-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ATY42_RS21195 1a282765f333f69e950855283b352f84 338 SUPERFAMILY SSF53901 46 338 6.78E-40 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS16145 c25545c0e345d3b530d6fcc860d94dfd 346 PIRSF PIRSF028415 1 346 6.2E-210 T 11-11-2016 IPR014545 Uncharacterised conserved protein UCP028415 ATY42_RS16145 c25545c0e345d3b530d6fcc860d94dfd 346 Pfam PF10030 Uncharacterized protein conserved in bacteria (DUF2272) 78 300 9.3E-103 T 11-11-2016 IPR019262 Domain of unknown function DUF2272 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 118 141 - T 11-11-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 SUPERFAMILY SSF53244 310 452 2.26E-25 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 Gene3D G3DSA:3.40.1190.10 117 308 5.6E-46 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 9 455 27.156 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 SUPERFAMILY SSF53623 118 307 1.96E-41 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 451 3.9E-84 T 11-11-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 Gene3D G3DSA:3.90.190.20 311 451 8.7E-29 T 11-11-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 Gene3D G3DSA:3.40.50.720 5 94 7.0E-5 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS07060 2853b69d774fea262a3bf6d65f6c58e2 468 Pfam PF08245 Mur ligase middle domain 120 289 1.6E-22 T 11-11-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 SMART SM00881 9 104 2.9E-16 T 11-11-2016 IPR003781 CoA-binding GO:0048037 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 SUPERFAMILY SSF51735 1 139 6.04E-29 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 152 289 4.3E-48 T 11-11-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Pfam PF13380 CoA binding domain 14 135 8.6E-19 T 11-11-2016 IPR003781 CoA-binding GO:0048037 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Gene3D G3DSA:3.40.630.30 744 893 7.5E-17 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Gene3D G3DSA:3.40.50.261 297 447 1.6E-14 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 SUPERFAMILY SSF52210 132 291 2.09E-36 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 SUPERFAMILY SSF52210 297 453 1.44E-36 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Pfam PF13549 ATP-grasp domain 482 706 1.6E-74 T 11-11-2016 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Gene3D G3DSA:3.40.50.720 2 132 1.9E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Pfam PF13302 Acetyltransferase (GNAT) domain 743 877 4.1E-9 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 Gene3D G3DSA:3.40.50.261 133 287 3.9E-30 T 11-11-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 SUPERFAMILY SSF55729 743 879 2.06E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS02210 55c83137d0c144e6378acb24bee2f0ac 902 SUPERFAMILY SSF56059 492 706 5.16E-30 T 11-11-2016 ATY42_RS18310 9e7a05ac1ba42c8c1fed2b720de6318d 161 Pfam PF11304 Protein of unknown function (DUF3106) 54 150 4.2E-22 T 11-11-2016 IPR021455 Protein of unknown function DUF3106 ATY42_RS10840 b68f5f4ee74b7091c2a7283e5f143161 358 Pfam PF00561 alpha/beta hydrolase fold 68 332 4.1E-24 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS10840 b68f5f4ee74b7091c2a7283e5f143161 358 SUPERFAMILY SSF53474 37 352 9.63E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS10840 b68f5f4ee74b7091c2a7283e5f143161 358 TIGRFAM TIGR01836 PHA_synth_III_C: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 7 354 3.8E-174 T 11-11-2016 IPR010125 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit GO:0016746|GO:0042619 ATY42_RS10840 b68f5f4ee74b7091c2a7283e5f143161 358 Gene3D G3DSA:3.40.50.1820 51 354 9.2E-41 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS10945 e42fc4b3e64a56fa4544a8be0692c510 94 Pfam PF13828 Domain of unknown function (DUF4190) 11 74 1.6E-22 T 11-11-2016 IPR025241 Domain of unknown function DUF4190 ATY42_RS19095 183ce869a4742910602b3454b0221c87 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.1E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS19095 183ce869a4742910602b3454b0221c87 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 3.1E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS19095 183ce869a4742910602b3454b0221c87 185 SUPERFAMILY SSF48498 80 180 6.0E-9 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS19095 183ce869a4742910602b3454b0221c87 185 SUPERFAMILY SSF46689 3 79 1.18E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS19095 183ce869a4742910602b3454b0221c87 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 59 4.5E-10 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS19095 183ce869a4742910602b3454b0221c87 185 Gene3D G3DSA:1.10.357.10 5 181 3.7E-31 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS23010 d681c07bcb39fb9512abdf985b362482 259 Pfam PF05598 Transposase domain (DUF772) 87 160 2.1E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS05460 ae324248544154f255bda670517157f0 207 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 199 6.0E-55 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS05460 ae324248544154f255bda670517157f0 207 Gene3D G3DSA:3.20.20.70 8 205 1.5E-54 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS05460 ae324248544154f255bda670517157f0 207 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 206 23.383 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS05460 ae324248544154f255bda670517157f0 207 SUPERFAMILY SSF51391 5 202 4.45E-52 T 11-11-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS05460 ae324248544154f255bda670517157f0 207 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 188 3.9E-49 T 11-11-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 SUPERFAMILY SSF109755 11 227 1.67E-64 T 11-11-2016 ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 Gene3D G3DSA:1.20.58.220 6 114 2.2E-27 T 11-11-2016 ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 Pfam PF01895 PhoU domain 24 110 7.7E-19 T 11-11-2016 IPR026022 PhoU domain ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 Pfam PF01895 PhoU domain 127 210 5.4E-17 T 11-11-2016 IPR026022 PhoU domain ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 PIRSF PIRSF003107 6 223 7.7E-58 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 Gene3D G3DSA:1.20.58.220 126 220 3.9E-30 T 11-11-2016 ATY42_RS12240 f286b8913a37913108cd757359ea450e 236 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 11 219 1.2E-59 T 11-11-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ATY42_RS11100 8f5bde7728449f496f55f848883bfc6d 357 Pfam PF02486 Replication initiation factor 150 279 3.5E-22 T 11-11-2016 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 ATY42_RS16590 11623641050a278cf30ac7896b02ae40 481 PIRSF PIRSF004919 21 480 8.5E-143 T 11-11-2016 IPR025502 TldD ATY42_RS16590 11623641050a278cf30ac7896b02ae40 481 SUPERFAMILY SSF111283 23 479 5.49E-137 T 11-11-2016 ATY42_RS16590 11623641050a278cf30ac7896b02ae40 481 Pfam PF01523 Putative modulator of DNA gyrase 40 331 2.9E-70 T 11-11-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 ATY42_RS11885 96e49de4cbd694794daa5a772813dba4 333 SUPERFAMILY SSF52980 46 153 5.9E-6 T 11-11-2016 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ATY42_RS11885 96e49de4cbd694794daa5a772813dba4 333 Gene3D G3DSA:3.40.1350.10 39 149 8.0E-9 T 11-11-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 Reactome: R-HSA-6784531 ATY42_RS11885 96e49de4cbd694794daa5a772813dba4 333 Pfam PF04471 Restriction endonuclease 42 149 9.0E-10 T 11-11-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 ATY42_RS10520 54aba3c1ae89904a361fd3049c4acfc5 399 SUPERFAMILY SSF46785 6 82 1.7E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10520 54aba3c1ae89904a361fd3049c4acfc5 399 Gene3D G3DSA:1.10.10.10 84 160 1.3E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10520 54aba3c1ae89904a361fd3049c4acfc5 399 Gene3D G3DSA:1.10.10.10 4 82 1.8E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10520 54aba3c1ae89904a361fd3049c4acfc5 399 SUPERFAMILY SSF46785 85 160 3.58E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10520 54aba3c1ae89904a361fd3049c4acfc5 399 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 169 3.3E-51 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ATY42_RS10520 54aba3c1ae89904a361fd3049c4acfc5 399 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 171 7.9E-34 T 11-11-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ATY42_RS11040 aba302994ab7b0e8feffb74c2910a298 200 Pfam PF00117 Glutamine amidotransferase class-I 6 195 8.1E-19 T 11-11-2016 IPR017926 Glutamine amidotransferase ATY42_RS11040 aba302994ab7b0e8feffb74c2910a298 200 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 197 5.9E-65 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ATY42_RS11040 aba302994ab7b0e8feffb74c2910a298 200 SUPERFAMILY SSF52317 4 197 1.0E-47 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS11040 aba302994ab7b0e8feffb74c2910a298 200 PIRSF PIRSF000495 2 199 4.7E-61 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ATY42_RS11040 aba302994ab7b0e8feffb74c2910a298 200 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 197 31.368 T 11-11-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ATY42_RS11040 aba302994ab7b0e8feffb74c2910a298 200 Gene3D G3DSA:3.40.50.880 1 197 5.7E-68 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS16420 07a5c122d119619f8546c112452e7cc4 115 SUPERFAMILY SSF52540 4 108 6.87E-12 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16420 07a5c122d119619f8546c112452e7cc4 115 Gene3D G3DSA:3.40.50.300 5 107 1.8E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16420 07a5c122d119619f8546c112452e7cc4 115 Pfam PF05872 Bacterial protein of unknown function (DUF853) 13 108 1.9E-33 T 11-11-2016 IPR033186 Helicase HerA-like C-terminal ATY42_RS20110 38618901063c84fa7633025307dfb814 189 Pfam PF08212 Lipocalin-like domain 32 173 2.1E-40 T 11-11-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain ATY42_RS20110 38618901063c84fa7633025307dfb814 189 ProSitePatterns PS00213 Lipocalin signature. 33 44 - T 11-11-2016 IPR022272 Lipocalin family conserved site ATY42_RS20110 38618901063c84fa7633025307dfb814 189 Gene3D G3DSA:2.40.128.20 3 173 1.2E-33 T 11-11-2016 IPR012674 Calycin ATY42_RS20110 38618901063c84fa7633025307dfb814 189 PIRSF PIRSF036893 1 185 1.5E-42 T 11-11-2016 IPR022271 Lipocalin, ApoD type ATY42_RS20110 38618901063c84fa7633025307dfb814 189 SUPERFAMILY SSF50814 25 176 4.52E-28 T 11-11-2016 IPR011038 Calycin-like ATY42_RS19600 1d5008526f02425765615af9734acb19 857 Gene3D G3DSA:3.40.640.10 485 702 2.5E-7 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS19600 1d5008526f02425765615af9734acb19 857 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 33 314 3.0E-62 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS19600 1d5008526f02425765615af9734acb19 857 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ATY42_RS19600 1d5008526f02425765615af9734acb19 857 Gene3D G3DSA:3.40.50.1100 80 325 1.3E-48 T 11-11-2016 ATY42_RS19600 1d5008526f02425765615af9734acb19 857 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 486 836 2.8E-7 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS19600 1d5008526f02425765615af9734acb19 857 SUPERFAMILY SSF53686 17 321 5.11E-68 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS19600 1d5008526f02425765615af9734acb19 857 SUPERFAMILY SSF53383 494 841 1.24E-13 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS12325 cae00e1a8c822b8fe72127e86e75ce4e 498 Pfam PF00202 Aminotransferase class-III 84 486 3.5E-35 T 11-11-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ATY42_RS12325 cae00e1a8c822b8fe72127e86e75ce4e 498 Gene3D G3DSA:3.40.640.10 121 374 1.4E-32 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS12325 cae00e1a8c822b8fe72127e86e75ce4e 498 SUPERFAMILY SSF53383 78 488 7.86E-53 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS12325 cae00e1a8c822b8fe72127e86e75ce4e 498 Gene3D G3DSA:3.90.1150.10 375 488 3.3E-13 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS12910 34ea6cb56e5bdc3a656be5f6087138e1 458 SMART SM00382 175 359 1.1E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12910 34ea6cb56e5bdc3a656be5f6087138e1 458 Gene3D G3DSA:3.40.50.300 111 376 8.4E-88 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12910 34ea6cb56e5bdc3a656be5f6087138e1 458 SUPERFAMILY SSF52540 111 379 3.85E-92 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12910 34ea6cb56e5bdc3a656be5f6087138e1 458 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 36 454 1.1E-166 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS12910 34ea6cb56e5bdc3a656be5f6087138e1 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 163 374 7.7E-72 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 SUPERFAMILY SSF46894 156 240 1.16E-9 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 SMART SM00862 161 240 7.9E-6 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 Gene3D G3DSA:3.40.50.2300 15 135 5.7E-23 T 11-11-2016 ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 SUPERFAMILY SSF52172 15 138 5.27E-25 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 SMART SM00448 14 126 1.1E-17 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 240 4.3E-7 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 Gene3D G3DSA:1.10.10.10 159 241 1.7E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS03275 763a691b036ba0ba73e7bf10d88db02e 242 Pfam PF00072 Response regulator receiver domain 16 123 1.1E-14 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07785 d3604b5a6ba582bfbfc07a1484580bfb 508 Pfam PF01564 Spermine/spermidine synthase 282 411 2.3E-11 T 11-11-2016 ATY42_RS07785 d3604b5a6ba582bfbfc07a1484580bfb 508 Gene3D G3DSA:3.40.50.150 279 430 3.1E-37 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS07785 d3604b5a6ba582bfbfc07a1484580bfb 508 SUPERFAMILY SSF53335 241 430 4.0E-35 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS15490 528ccb77d5f431933251a00c480f6a72 328 SUPERFAMILY SSF53098 7 292 1.37E-23 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15490 528ccb77d5f431933251a00c480f6a72 328 Pfam PF13546 DDE superfamily endonuclease 2 180 9.0E-60 T 11-11-2016 ATY42_RS02255 31237ed3e68a41f93b655f632dd3ad7a 163 SUPERFAMILY SSF100950 1 147 4.94E-43 T 11-11-2016 ATY42_RS02255 31237ed3e68a41f93b655f632dd3ad7a 163 Pfam PF01144 Coenzyme A transferase 1 117 6.2E-25 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ATY42_RS02255 31237ed3e68a41f93b655f632dd3ad7a 163 Gene3D G3DSA:3.40.810.20 1 145 2.7E-52 T 11-11-2016 ATY42_RS22680 a8675e29c641586abce7e8e1d3885bac 281 SMART SM00382 45 250 6.4E-12 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS22680 a8675e29c641586abce7e8e1d3885bac 281 Pfam PF00005 ABC transporter 36 193 3.6E-21 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS22680 a8675e29c641586abce7e8e1d3885bac 281 Gene3D G3DSA:3.40.50.300 19 256 7.3E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22680 a8675e29c641586abce7e8e1d3885bac 281 SUPERFAMILY SSF52540 16 108 7.44E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22680 a8675e29c641586abce7e8e1d3885bac 281 SUPERFAMILY SSF52540 135 257 7.44E-48 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00275 34a1be23b26145e1a71f2c1b8414a4e8 269 Pfam PF13546 DDE superfamily endonuclease 39 267 3.0E-81 T 11-11-2016 ATY42_RS00275 34a1be23b26145e1a71f2c1b8414a4e8 269 SUPERFAMILY SSF53098 39 260 4.17E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12080 b767e5a6f6d037f0d070919bf071de48 318 Pfam PF06189 5'-nucleotidase 39 316 1.3E-106 T 11-11-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: R-HSA-74259 ATY42_RS01720 3bd56cdd296dab1623e0f6f84a74b48c 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 183 202 2.2E-5 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS01720 3bd56cdd296dab1623e0f6f84a74b48c 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 2.2E-5 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS01720 3bd56cdd296dab1623e0f6f84a74b48c 263 PRINTS PR00164 ABC-2 type transport system membrane protein signature 109 134 2.2E-5 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS01720 3bd56cdd296dab1623e0f6f84a74b48c 263 PIRSF PIRSF006648 1 260 1.9E-28 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS01720 3bd56cdd296dab1623e0f6f84a74b48c 263 Pfam PF01061 ABC-2 type transporter 17 225 1.4E-34 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATY42_RS03465 9208f0264d9e0fc0e5ae149a32ad3964 252 Pfam PF11101 Protein of unknown function (DUF2884) 31 244 3.0E-33 T 11-11-2016 IPR021307 Protein of unknown function DUF2884 ATY42_RS15440 893363750139536ab65c3260ad49d91f 253 SUPERFAMILY SSF52821 103 233 8.25E-25 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS15440 893363750139536ab65c3260ad49d91f 253 Pfam PF00581 Rhodanese-like domain 118 212 1.8E-5 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS15440 893363750139536ab65c3260ad49d91f 253 Gene3D G3DSA:3.40.250.10 102 228 1.5E-27 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS15440 893363750139536ab65c3260ad49d91f 253 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 244 33.049 T 11-11-2016 IPR020936 Uncharacterised protein family UPF0176 ATY42_RS15440 893363750139536ab65c3260ad49d91f 253 SMART SM00450 117 218 1.5E-11 T 11-11-2016 IPR001763 Rhodanese-like domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Gene3D G3DSA:3.30.450.20 294 431 5.8E-26 T 11-11-2016 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Gene3D G3DSA:3.30.450.20 171 293 2.6E-13 T 11-11-2016 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00091 445 511 3.1E-13 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00091 308 375 2.7E-7 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00091 572 638 0.0052 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00091 176 246 11.0 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00267 685 857 4.6E-42 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SUPERFAMILY SSF55785 293 431 1.05E-20 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SUPERFAMILY SSF55781 33 175 1.96E-27 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SUPERFAMILY SSF55785 164 294 2.79E-13 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Pfam PF08447 PAS fold 470 552 3.1E-12 T 11-11-2016 IPR013655 PAS fold-3 GO:0005515 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Gene3D G3DSA:3.30.450.20 446 576 7.2E-26 T 11-11-2016 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SUPERFAMILY SSF55785 557 683 2.09E-19 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Pfam PF01590 GAF domain 35 162 1.2E-8 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Pfam PF08448 PAS fold 182 297 1.1E-7 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Pfam PF08448 PAS fold 316 433 6.3E-9 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Pfam PF08448 PAS fold 579 685 3.2E-13 T 11-11-2016 IPR013656 PAS fold-4 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Gene3D G3DSA:3.30.450.40 33 170 4.8E-15 T 11-11-2016 IPR029016 GAF domain-like ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SUPERFAMILY SSF55785 451 561 4.67E-23 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SUPERFAMILY SSF55073 701 852 3.14E-39 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Gene3D G3DSA:3.30.450.20 577 684 1.4E-17 T 11-11-2016 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00065 30 174 7.5E-6 T 11-11-2016 IPR003018 GAF domain GO:0005515 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Gene3D G3DSA:3.30.70.270 698 852 6.2E-44 T 11-11-2016 ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 694 853 1.1E-34 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00086 391 433 0.0032 T 11-11-2016 IPR001610 PAC motif ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00086 518 560 1.4E-7 T 11-11-2016 IPR001610 PAC motif ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 SMART SM00086 254 296 9.5 T 11-11-2016 IPR001610 PAC motif ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 Pfam PF00990 Diguanylate cyclase, GGDEF domain 696 852 4.8E-37 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 568 689 1.1E-8 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 445 567 7.4E-26 T 11-11-2016 IPR000014 PAS domain ATY42_RS20195 aeb3f90fadb34a22891e76636f82dd24 874 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 439 8.3E-14 T 11-11-2016 IPR000014 PAS domain ATY42_RS11440 45d383bf5a00715daec1793defdbf310 128 Gene3D G3DSA:1.20.1300.10 11 122 1.3E-27 T 11-11-2016 ATY42_RS11440 45d383bf5a00715daec1793defdbf310 128 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 3 118 6.9E-16 T 11-11-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ATY42_RS11440 45d383bf5a00715daec1793defdbf310 128 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 17 120 7.3E-29 T 11-11-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 ATY42_RS11440 45d383bf5a00715daec1793defdbf310 128 SUPERFAMILY SSF81343 12 123 2.09E-25 T 11-11-2016 ATY42_RS04275 588280c22cf9d39fe8c0d2aae579371f 319 Gene3D G3DSA:1.10.8.60 162 196 2.5E-4 T 11-11-2016 ATY42_RS04275 588280c22cf9d39fe8c0d2aae579371f 319 Gene3D G3DSA:3.40.50.300 7 161 9.6E-41 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04275 588280c22cf9d39fe8c0d2aae579371f 319 Pfam PF13177 DNA polymerase III, delta subunit 9 170 6.1E-33 T 11-11-2016 ATY42_RS04275 588280c22cf9d39fe8c0d2aae579371f 319 SUPERFAMILY SSF52540 7 210 1.46E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19300 1afbedf70f5c9224c73f33ef6ce7c226 255 Pfam PF05742 Transport and Golgi organisation 2 1 235 9.7E-50 T 11-11-2016 IPR008551 Transport and Golgi organisation protein 2 ATY42_RS05340 74f2f37e81f93fca2a7a0064dcbea1e2 397 SUPERFAMILY SSF56935 25 387 1.25E-9 T 11-11-2016 ATY42_RS05340 74f2f37e81f93fca2a7a0064dcbea1e2 397 Gene3D G3DSA:2.40.160.10 24 397 7.5E-88 T 11-11-2016 IPR023614 Porin domain ATY42_RS05340 74f2f37e81f93fca2a7a0064dcbea1e2 397 Pfam PF07396 Phosphate-selective porin O and P 35 397 2.2E-89 T 11-11-2016 IPR010870 Phosphate-selective porin O/P ATY42_RS19565 5cf795cb6d6ecaf5dd3fb98e415735d8 216 Pfam PF13462 Thioredoxin 49 198 3.2E-11 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS19565 5cf795cb6d6ecaf5dd3fb98e415735d8 216 PIRSF PIRSF001488 6 211 2.5E-33 T 11-11-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL ATY42_RS19565 5cf795cb6d6ecaf5dd3fb98e415735d8 216 Gene3D G3DSA:3.40.30.10 30 211 1.6E-50 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS19565 5cf795cb6d6ecaf5dd3fb98e415735d8 216 ProSitePatterns PS00194 Thioredoxin family active site. 52 70 - T 11-11-2016 IPR017937 Thioredoxin, conserved site GO:0045454 ATY42_RS19565 5cf795cb6d6ecaf5dd3fb98e415735d8 216 SUPERFAMILY SSF52833 27 206 1.77E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS22615 bd1d396d7ee7fd77d469225fd197210b 210 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 153 1.5E-17 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATY42_RS22615 bd1d396d7ee7fd77d469225fd197210b 210 SUPERFAMILY SSF52540 1 208 8.24E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22615 bd1d396d7ee7fd77d469225fd197210b 210 PIRSF PIRSF009320 1 207 4.1E-28 T 11-11-2016 ATY42_RS22615 bd1d396d7ee7fd77d469225fd197210b 210 Gene3D G3DSA:3.40.50.300 3 208 3.7E-33 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 SUPERFAMILY SSF90123 22 338 4.32E-40 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 Gene3D G3DSA:1.20.1560.10 35 340 1.0E-31 T 11-11-2016 ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 33 560 1.0E-148 T 11-11-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 SMART SM00382 389 564 4.2E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 SUPERFAMILY SSF52540 366 564 1.61E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 Gene3D G3DSA:3.40.50.300 377 568 2.3E-57 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 Pfam PF00664 ABC transporter transmembrane region 36 281 3.4E-18 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 Pfam PF00005 ABC transporter 381 518 2.5E-25 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS13145 164ed73918c180ab89255d8648fe1e07 570 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS17285 68d9ba9fb01bac331ed7d36d3e4f7273 73 SUPERFAMILY SSF89447 1 63 9.59E-12 T 11-11-2016 ATY42_RS17285 68d9ba9fb01bac331ed7d36d3e4f7273 73 Gene3D G3DSA:2.10.260.10 1 48 6.2E-9 T 11-11-2016 ATY42_RS17285 68d9ba9fb01bac331ed7d36d3e4f7273 73 SMART SM00966 6 51 5.5E-6 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ATY42_RS17285 68d9ba9fb01bac331ed7d36d3e4f7273 73 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 46 6.1E-6 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ATY42_RS17285 68d9ba9fb01bac331ed7d36d3e4f7273 73 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 3 72 2.0E-24 T 11-11-2016 IPR013432 Putative addiction module antidote ATY42_RS20000 b3816c198f770a4c952466a3657b8d90 223 Pfam PF13518 Helix-turn-helix domain 13 66 1.0E-13 T 11-11-2016 ATY42_RS20000 b3816c198f770a4c952466a3657b8d90 223 SUPERFAMILY SSF46689 12 112 2.69E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20000 b3816c198f770a4c952466a3657b8d90 223 Gene3D G3DSA:1.10.10.10 11 58 6.4E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS04405 e4943c8089f2ebe2b89e3308be0e4d53 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 4 59 3.4E-16 T 11-11-2016 IPR019201 Protein of unknown function DUF2065 ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 229 1.4E-81 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 Gene3D G3DSA:1.10.1270.20 162 246 4.2E-30 T 11-11-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 223 6.9E-55 T 11-11-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 259 102.216 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 Gene3D G3DSA:3.40.1280.10 2 160 2.5E-60 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 SUPERFAMILY SSF75217 2 247 2.75E-91 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS06520 fa6206aaf8b432d109b115ffab5d6764 259 PIRSF PIRSF000386 1 253 6.6E-88 T 11-11-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ATY42_RS17880 960c8320b52d66108237b4affecb7a39 361 Pfam PF11876 Protein of unknown function (DUF3396) 126 331 1.7E-44 T 11-11-2016 IPR021815 Protein of unknown function DUF3396 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 17 128 9.1E-30 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 348 367 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 133 228 2.7E-26 T 11-11-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 Gene3D G3DSA:1.20.140.10 229 391 2.1E-65 T 11-11-2016 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 Gene3D G3DSA:2.40.110.10 132 228 2.2E-34 T 11-11-2016 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 SUPERFAMILY SSF56645 8 253 3.53E-73 T 11-11-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 241 388 3.0E-48 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 Gene3D G3DSA:1.10.540.10 10 130 2.4E-37 T 11-11-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 SUPERFAMILY SSF47203 240 391 2.42E-56 T 11-11-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ATY42_RS10095 2a42edbab9cce6f449a2264389661928 393 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 135 147 - T 11-11-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 173 316 7.9E-62 T 11-11-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 8 316 2.8E-126 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 1 318 41.61 T 11-11-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 SUPERFAMILY SSF48179 173 321 2.04E-66 T 11-11-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 SUPERFAMILY SSF51735 7 172 2.69E-63 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 8 166 1.7E-69 T 11-11-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ATY42_RS04545 223a867f4dbcc3e12395f95b5eb178da 333 Gene3D G3DSA:1.10.1040.10 19 314 3.8E-107 T 11-11-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ATY42_RS17815 08fa33032ff55e2541e333746154ef0f 254 Pfam PF01569 PAP2 superfamily 109 238 5.5E-9 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS17815 08fa33032ff55e2541e333746154ef0f 254 SUPERFAMILY SSF48317 43 241 5.82E-10 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 SUPERFAMILY SSF53335 401 705 4.84E-58 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Gene3D G3DSA:3.40.50.150 259 375 6.0E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Gene3D G3DSA:3.40.50.150 144 217 6.0E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 11-11-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 485 663 1.0E-14 T 11-11-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Gene3D G3DSA:3.40.50.150 450 709 4.7E-67 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 SUPERFAMILY SSF53335 262 375 1.4E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 SUPERFAMILY SSF53335 143 220 1.4E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Pfam PF02926 THUMP domain 30 152 4.0E-9 T 11-11-2016 IPR004114 THUMP domain GO:0003723 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 PIRSF PIRSF037618 1 711 1.5E-283 T 11-11-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Pfam PF01170 Putative RNA methylase family UPF0020 161 372 1.5E-38 T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 11-11-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 SMART SM00981 55 153 3.8E-20 T 11-11-2016 IPR004114 THUMP domain GO:0003723 ATY42_RS12095 0dd9b0ac21b34500ab69eb5d34ccbbf4 711 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 3 711 29.707 T 11-11-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS10600 1e5e67eb170d4ffe4872166441b5cc7d 344 Gene3D G3DSA:3.75.10.10 2 340 6.9E-123 T 11-11-2016 ATY42_RS10600 1e5e67eb170d4ffe4872166441b5cc7d 344 SUPERFAMILY SSF55909 2 339 1.16E-113 T 11-11-2016 ATY42_RS10600 1e5e67eb170d4ffe4872166441b5cc7d 344 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 6 338 2.5E-108 T 11-11-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 ATY42_RS04680 5de757efcf62919bdfe8ab70ed028472 375 Gene3D G3DSA:2.30.30.60 194 243 2.7E-5 T 11-11-2016 ATY42_RS04680 5de757efcf62919bdfe8ab70ed028472 375 Pfam PF00924 Mechanosensitive ion channel 139 331 1.4E-23 T 11-11-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ATY42_RS04680 5de757efcf62919bdfe8ab70ed028472 375 SUPERFAMILY SSF50182 179 244 7.85E-13 T 11-11-2016 IPR010920 LSM domain ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 Gene3D G3DSA:3.30.300.30 390 487 1.5E-29 T 11-11-2016 ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 Gene3D G3DSA:3.40.50.980 11 154 2.4E-28 T 11-11-2016 ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 478 5.9E-19 T 11-11-2016 IPR025110 AMP-binding enzyme C-terminal domain ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 11-11-2016 IPR020845 AMP-binding, conserved site ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 Pfam PF00501 AMP-binding enzyme 27 395 5.5E-82 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 SUPERFAMILY SSF56801 6 489 6.54E-132 T 11-11-2016 ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 Gene3D G3DSA:3.40.50.980 155 298 9.6E-28 T 11-11-2016 ATY42_RS18785 d666a8a19ecf8e306e3c138c390385f4 492 Gene3D G3DSA:2.30.38.10 315 389 1.8E-26 T 11-11-2016 ATY42_RS20965 1d13b19136eb01b62fbf1716366a3b57 209 Gene3D G3DSA:2.30.110.10 17 191 1.1E-63 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS20965 1d13b19136eb01b62fbf1716366a3b57 209 SMART SM00903 28 179 5.1E-11 T 11-11-2016 IPR002563 Flavin reductase like domain GO:0010181 ATY42_RS20965 1d13b19136eb01b62fbf1716366a3b57 209 Pfam PF01613 Flavin reductase like domain 30 174 2.5E-15 T 11-11-2016 IPR002563 Flavin reductase like domain GO:0010181 ATY42_RS20965 1d13b19136eb01b62fbf1716366a3b57 209 SUPERFAMILY SSF50475 8 194 1.42E-47 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS00730 2a5d07f3554cebfb974b1e98d6fc2f71 714 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 274 515 5.4E-31 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATY42_RS00730 2a5d07f3554cebfb974b1e98d6fc2f71 714 Gene3D G3DSA:3.20.20.190 270 404 7.6E-21 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS00730 2a5d07f3554cebfb974b1e98d6fc2f71 714 SUPERFAMILY SSF51695 273 406 2.46E-20 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS09460 9520ef99ff2f7ad63d0cf126a04aaa79 148 Pfam PF05598 Transposase domain (DUF772) 75 147 1.3E-14 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 360 4.1E-142 T 11-11-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 ProSitePatterns PS00770 Aminotransferases class-IV signature. 236 266 - T 11-11-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 Gene3D G3DSA:3.20.10.10 178 347 1.2E-69 T 11-11-2016 ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 Pfam PF01063 Amino-transferase class IV 73 316 3.8E-35 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 PIRSF PIRSF006468 4 361 1.1E-134 T 11-11-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: R-HSA-70895 ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 Gene3D G3DSA:3.30.470.10 18 177 2.0E-68 T 11-11-2016 ATY42_RS18260 1396213bc81f971dde226503a36ca976 361 SUPERFAMILY SSF56752 12 357 9.16E-114 T 11-11-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 190 209 1.8E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 228 241 1.8E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 PRINTS PR00723 Subtilisin serine protease family (S8) signature 379 395 1.8E-19 T 11-11-2016 IPR015500 Peptidase S8, subtilisin-related ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 232 242 - T 11-11-2016 IPR022398 Peptidase S8, subtilisin, His-active site ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 SUPERFAMILY SSF52743 169 432 1.57E-57 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 Pfam PF00082 Subtilase family 190 326 8.0E-17 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 Pfam PF00082 Subtilase family 359 417 7.0E-10 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 195 206 - T 11-11-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site ATY42_RS15025 000142e2cf29f17b32ebf32fcbd3bc3e 441 Gene3D G3DSA:3.40.50.200 128 432 1.4E-62 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS17505 65c87b8e6a13876c3dc4f9f0b3b3191d 498 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 20 492 1.6E-220 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ATY42_RS17505 65c87b8e6a13876c3dc4f9f0b3b3191d 498 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 69 492 5.2E-197 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ATY42_RS01010 46b34c046f0d3cc9e786ee4e963257ec 139 SUPERFAMILY SSF54427 5 133 3.32E-27 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS01010 46b34c046f0d3cc9e786ee4e963257ec 139 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 12 138 4.0E-43 T 11-11-2016 IPR011721 Conserved hypothetical protein CHP02096 ATY42_RS01010 46b34c046f0d3cc9e786ee4e963257ec 139 Pfam PF12680 SnoaL-like domain 13 124 1.4E-16 T 11-11-2016 IPR009959 Polyketide cyclase SnoaL-like domain ATY42_RS01010 46b34c046f0d3cc9e786ee4e963257ec 139 Gene3D G3DSA:3.10.450.50 5 138 1.5E-27 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 187 1.0E-28 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 Gene3D G3DSA:1.10.1740.10 8 110 8.9E-32 T 11-11-2016 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 6 194 2.2E-106 T 11-11-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 Pfam PF04542 Sigma-70 region 2 29 94 3.8E-16 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 SUPERFAMILY SSF88659 127 186 6.76E-17 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 Pfam PF08281 Sigma-70, region 4 134 185 3.6E-18 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 SUPERFAMILY SSF88946 10 109 7.38E-28 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS08960 22ff009d4cce49b332bf4d8aa6ae17ce 206 Gene3D G3DSA:1.10.10.10 127 192 3.5E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02060 47f1e36e269c713ae0fa1d635d37b1c7 371 SUPERFAMILY SSF53474 103 342 1.35E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02060 47f1e36e269c713ae0fa1d635d37b1c7 371 Gene3D G3DSA:3.40.50.1820 262 339 6.9E-42 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02060 47f1e36e269c713ae0fa1d635d37b1c7 371 Gene3D G3DSA:3.40.50.1820 103 226 6.9E-42 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02060 47f1e36e269c713ae0fa1d635d37b1c7 371 Pfam PF12697 Alpha/beta hydrolase family 112 322 2.3E-15 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS15555 a923f4ea1aa5b0f027df0b2085f15a3a 64 Gene3D G3DSA:3.30.9.10 28 60 7.6E-4 T 11-11-2016 ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 SUPERFAMILY SSF50447 3 72 4.37E-15 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 188 325 5.5E-54 T 11-11-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 Gene3D G3DSA:2.40.30.10 5 108 5.7E-20 T 11-11-2016 ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 Gene3D G3DSA:3.40.50.300 185 325 2.4E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 SUPERFAMILY SSF50465 74 175 1.26E-33 T 11-11-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 Pfam PF01583 Adenylylsulphate kinase 206 325 1.8E-51 T 11-11-2016 ATY42_RS09445 6b20e1eb983da9e9a8045f174aa85e9c 325 SUPERFAMILY SSF52540 202 324 8.7E-24 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04180 5767a5caacf7ff01908e41012d7cc9ff 96 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 96 5.4E-21 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 ATY42_RS04180 5767a5caacf7ff01908e41012d7cc9ff 96 Gene3D G3DSA:3.30.70.240 1 72 1.5E-28 T 11-11-2016 IPR000640 Translation elongation factor EFG, V domain ATY42_RS04180 5767a5caacf7ff01908e41012d7cc9ff 96 SUPERFAMILY SSF143430 1 89 2.22E-27 T 11-11-2016 ATY42_RS04180 5767a5caacf7ff01908e41012d7cc9ff 96 PIRSF PIRSF032582 1 96 1.2E-38 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 ATY42_RS04180 5767a5caacf7ff01908e41012d7cc9ff 96 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 95 16.146 T 11-11-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 ATY42_RS04180 5767a5caacf7ff01908e41012d7cc9ff 96 Pfam PF09827 CRISPR associated protein Cas2 1 78 2.6E-24 T 11-11-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 17 607 5.1E-206 T 11-11-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Gene3D G3DSA:3.40.50.740 287 420 9.9E-26 T 11-11-2016 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Gene3D G3DSA:3.40.50.740 496 628 9.9E-26 T 11-11-2016 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 SUPERFAMILY SSF53706 226 625 3.5E-73 T 11-11-2016 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 96 133 6.5E-16 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Pfam PF01568 Molydopterin dinucleotide binding domain 675 730 3.2E-12 T 11-11-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 89 1.2E-18 T 11-11-2016 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 44 61 - T 11-11-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 SUPERFAMILY SSF54862 89 223 2.01E-36 T 11-11-2016 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Pfam PF00384 Molybdopterin oxidoreductase 285 415 2.0E-17 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Pfam PF00384 Molybdopterin oxidoreductase 442 608 2.4E-9 T 11-11-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 111 123 - T 11-11-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Gene3D G3DSA:3.10.20.30 14 67 2.3E-5 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 SUPERFAMILY SSF54292 15 87 7.18E-19 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 SMART SM00929 96 136 2.5E-19 T 11-11-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 SUPERFAMILY SSF50692 677 735 4.29E-13 T 11-11-2016 IPR009010 Aspartate decarboxylase-like domain ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 Gene3D G3DSA:2.40.40.20 672 729 3.6E-12 T 11-11-2016 ATY42_RS16225 6c72d5a06085070bd6fc64260d1783de 744 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 158 168 - T 11-11-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS10310 dc6075485608cce95adae75277279cd4 198 Pfam PF02525 Flavodoxin-like fold 1 185 2.1E-46 T 11-11-2016 IPR003680 Flavodoxin-like fold ATY42_RS10310 dc6075485608cce95adae75277279cd4 198 SUPERFAMILY SSF52218 1 186 2.68E-49 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS10310 dc6075485608cce95adae75277279cd4 198 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 192 30.772 T 11-11-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ATY42_RS10310 dc6075485608cce95adae75277279cd4 198 Gene3D G3DSA:3.40.50.360 1 185 4.9E-59 T 11-11-2016 IPR029039 Flavoprotein-like domain ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 Pfam PF08544 GHMP kinases C terminal 214 269 4.4E-6 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 16 286 1.9E-72 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 Gene3D G3DSA:3.30.230.10 17 170 4.3E-53 T 11-11-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 SUPERFAMILY SSF55060 172 287 2.59E-25 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 Pfam PF00288 GHMP kinases N terminal domain 99 155 7.0E-11 T 11-11-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 15 283 32.144 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 SUPERFAMILY SSF54211 17 170 1.14E-43 T 11-11-2016 IPR020568 Ribosomal protein S5 domain 2-type fold ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 Gene3D G3DSA:3.30.70.890 172 288 3.6E-33 T 11-11-2016 IPR013750 GHMP kinase, C-terminal domain ATY42_RS18165 5f7a2edf31481959ab16287aeb2e132e 295 PIRSF PIRSF010376 13 291 1.5E-85 T 11-11-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 4.1E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 4.1E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 4.1E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 4.1E-16 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 44 1.0E-9 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-11-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 3.8E-24 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 22.259 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20770 35b943693d9b9050dbf636e6ca69f3cd 71 Pfam PF01165 Ribosomal protein S21 3 56 2.9E-22 T 11-11-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS16255 1ba9c667b5d1fcec2ac4f94d9f96807e 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 18.896 T 11-11-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 ATY42_RS16255 1ba9c667b5d1fcec2ac4f94d9f96807e 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 20 117 8.9E-36 T 11-11-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS06250 2abbe103dc41d28eac36e25ae20022a9 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 326 2.5E-92 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATY42_RS06250 2abbe103dc41d28eac36e25ae20022a9 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 333 5.0E-44 T 11-11-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ATY42_RS23120 5c96870bf53606a1bda1cacdb3ac09b4 195 Pfam PF14103 Domain of unknown function (DUF4276) 10 182 1.1E-10 T 11-11-2016 IPR025455 Protein of unknown function DUF4276 ATY42_RS19105 b0eed54ff36e0fb76f7fcad7a6aaf26b 181 Gene3D G3DSA:3.40.50.1820 43 140 1.3E-17 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19105 b0eed54ff36e0fb76f7fcad7a6aaf26b 181 Pfam PF00326 Prolyl oligopeptidase family 86 139 5.6E-11 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS19105 b0eed54ff36e0fb76f7fcad7a6aaf26b 181 SUPERFAMILY SSF53474 46 141 1.42E-16 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09340 d20156cced990a62214123f69588617f 277 Pfam PF10099 Anti-sigma-K factor rskA 66 268 7.0E-26 T 11-11-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 ATY42_RS17825 3b279589dfe9aeea413c8e4529ecc666 672 SUPERFAMILY SSF55486 40 312 3.13E-185 T 11-11-2016 ATY42_RS17825 3b279589dfe9aeea413c8e4529ecc666 672 SUPERFAMILY SSF55486 343 655 3.13E-185 T 11-11-2016 ATY42_RS17825 3b279589dfe9aeea413c8e4529ecc666 672 Pfam PF01401 Angiotensin-converting enzyme 40 654 3.4E-185 T 11-11-2016 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 ATY42_RS10830 80ed572af499203f0702e673ddd98992 204 Pfam PF01066 CDP-alcohol phosphatidyltransferase 13 83 4.7E-14 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS10830 80ed572af499203f0702e673ddd98992 204 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Pfam PF13192 Thioredoxin domain 125 195 1.4E-8 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Gene3D G3DSA:3.40.30.10 1 94 6.4E-32 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PIRSF PIRSF000238 1 520 6.9E-268 T 11-11-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 374 6.1E-40 T 11-11-2016 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 467 489 6.1E-40 T 11-11-2016 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 6.1E-40 T 11-11-2016 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 441 457 6.1E-40 T 11-11-2016 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 314 332 6.1E-40 T 11-11-2016 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Gene3D G3DSA:3.50.50.60 213 339 5.3E-23 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 SUPERFAMILY SSF52833 106 196 3.47E-22 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 516 1.3E-240 T 11-11-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 344 364 - T 11-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 SUPERFAMILY SSF52833 1 101 1.68E-30 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 1.0E-44 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 352 376 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 443 464 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 477 495 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 337 349 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 404 420 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 315 323 3.2E-64 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Gene3D G3DSA:3.50.50.60 423 516 3.6E-14 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 SUPERFAMILY SSF51905 209 513 8.84E-53 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Gene3D G3DSA:3.40.30.10 105 197 2.4E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18385 f76c4cec385d81c887c628d60395397b 530 Gene3D G3DSA:3.50.50.60 340 422 4.8E-30 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 Pfam PF01578 Cytochrome C assembly protein 45 188 1.1E-27 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 49 66 1.1E-50 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 160 186 1.1E-50 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 208 232 1.1E-50 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 66 86 1.1E-50 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 125 145 1.1E-50 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 104 124 1.1E-50 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS15030 e6f0c1929e284a7ea868b1ebeffa7f2b 252 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 49 231 5.6E-73 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS04775 531c8a048eac9bee3dafdf80832bb76b 403 SUPERFAMILY SSF53098 20 367 4.17E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04775 531c8a048eac9bee3dafdf80832bb76b 403 Pfam PF13546 DDE superfamily endonuclease 1 255 4.4E-86 T 11-11-2016 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 Gene3D G3DSA:3.30.590.10 127 446 7.1E-96 T 11-11-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-11-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 Pfam PF00120 Glutamine synthetase, catalytic domain 124 455 1.4E-105 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 SUPERFAMILY SSF55931 123 458 2.84E-107 T 11-11-2016 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 SUPERFAMILY SSF54368 19 122 6.28E-24 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 Gene3D G3DSA:3.10.20.70 19 126 7.8E-21 T 11-11-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS13795 1d9f3136ed0e13885a1b97f629525238 461 SMART SM01230 123 380 5.9E-104 T 11-11-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ATY42_RS14800 3dd9418fabe76e6388d7db3b7cce6af7 272 Gene3D G3DSA:3.90.550.10 10 235 1.3E-63 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS14800 3dd9418fabe76e6388d7db3b7cce6af7 272 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 9 235 29.163 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATY42_RS14800 3dd9418fabe76e6388d7db3b7cce6af7 272 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 108 115 - T 11-11-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATY42_RS14800 3dd9418fabe76e6388d7db3b7cce6af7 272 SUPERFAMILY SSF53448 10 231 4.73E-53 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS14800 3dd9418fabe76e6388d7db3b7cce6af7 272 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 231 9.7E-71 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATY42_RS14800 3dd9418fabe76e6388d7db3b7cce6af7 272 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11 233 3.5E-62 T 11-11-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 SUPERFAMILY SSF56519 57 248 3.4E-47 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 233 9.0E-41 T 11-11-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 604 9.1E-63 T 11-11-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 Gene3D G3DSA:3.90.1310.10 130 247 1.1E-32 T 11-11-2016 ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 Gene3D G3DSA:3.40.710.10 249 608 4.4E-98 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 607 5.9E-205 T 11-11-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 ATY42_RS19950 1e105460e14febea3cf4772fbe88babf 686 SUPERFAMILY SSF56601 250 607 1.43E-91 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 262 274 8.7E-12 T 11-11-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 164 183 8.7E-12 T 11-11-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 236 248 8.7E-12 T 11-11-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 275 288 8.7E-12 T 11-11-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 113 123 8.7E-12 T 11-11-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 8.7E-12 T 11-11-2016 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 SUPERFAMILY SSF51430 1 319 4.06E-92 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 Gene3D G3DSA:3.20.20.100 1 319 2.5E-98 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS19015 21c5911f39f62e7b1cb754765ab6b3d3 322 Pfam PF00248 Aldo/keto reductase family 16 317 1.1E-70 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS20730 7d81cd2824ac3f71b6661dcaa9c36bc0 176 Pfam PF13551 Winged helix-turn helix 27 86 1.8E-14 T 11-11-2016 ATY42_RS20730 7d81cd2824ac3f71b6661dcaa9c36bc0 176 Pfam PF13592 Winged helix-turn helix 104 162 5.5E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS20730 7d81cd2824ac3f71b6661dcaa9c36bc0 176 SUPERFAMILY SSF46689 21 138 3.76E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS00590 11efcda8bff192a1594e08d304cd0cdc 160 Pfam PF13628 Domain of unknown function (DUF4142) 19 155 7.0E-11 T 11-11-2016 IPR025419 Domain of unknown function DUF4142 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 SUPERFAMILY SSF81324 30 244 2.42E-52 T 11-11-2016 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 Pfam PF00520 Ion transport protein 35 244 7.6E-31 T 11-11-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 PRINTS PR00169 Potassium channel signature 131 157 1.5E-24 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 PRINTS PR00169 Potassium channel signature 189 211 1.5E-24 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 PRINTS PR00169 Potassium channel signature 218 244 1.5E-24 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 PRINTS PR00169 Potassium channel signature 69 92 1.5E-24 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 PRINTS PR00169 Potassium channel signature 95 115 1.5E-24 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 PRINTS PR00169 Potassium channel signature 27 55 1.5E-24 T 11-11-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 ATY42_RS05940 a80d391de77ff4b4b7e480bfa27d2187 290 Gene3D G3DSA:1.10.287.70 36 244 1.3E-48 T 11-11-2016 ATY42_RS19845 f82b2386b3783d5a73cd4fa3658353f6 166 SUPERFAMILY SSF53335 42 95 1.79E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19845 f82b2386b3783d5a73cd4fa3658353f6 166 Gene3D G3DSA:3.40.50.150 42 98 2.4E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS19845 f82b2386b3783d5a73cd4fa3658353f6 166 Pfam PF01555 DNA methylase 42 90 7.0E-9 T 11-11-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 ATY42_RS19845 f82b2386b3783d5a73cd4fa3658353f6 166 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 75 95 3.0E-6 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATY42_RS19845 f82b2386b3783d5a73cd4fa3658353f6 166 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 52 70 3.0E-6 T 11-11-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 ATY42_RS22500 81bd4c987288a5051649a938fe63ccb5 175 SUPERFAMILY SSF88874 1 169 2.53E-49 T 11-11-2016 ATY42_RS22500 81bd4c987288a5051649a938fe63ccb5 175 Gene3D G3DSA:3.90.1340.10 1 68 1.6E-27 T 11-11-2016 IPR011083 Phage tail collar domain ATY42_RS22500 81bd4c987288a5051649a938fe63ccb5 175 Pfam PF07484 Phage Tail Collar Domain 7 63 8.3E-23 T 11-11-2016 IPR011083 Phage tail collar domain ATY42_RS19545 c1f539f8f429fe7139b5100ed0ae010a 231 Pfam PF01988 VIT family 17 224 2.5E-55 T 11-11-2016 IPR008217 Ccc1 family ATY42_RS09880 30ac0b8837020b864f362bbab69a8b9c 308 SUPERFAMILY SSF56954 7 298 1.09E-29 T 11-11-2016 ATY42_RS09880 30ac0b8837020b864f362bbab69a8b9c 308 Pfam PF02321 Outer membrane efflux protein 124 298 1.7E-18 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS09880 30ac0b8837020b864f362bbab69a8b9c 308 Gene3D G3DSA:1.20.1600.10 16 298 7.9E-22 T 11-11-2016 ATY42_RS14030 8e0680d20429dde71d7ec40d045550bb 818 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 231 385 2.4E-96 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS14030 8e0680d20429dde71d7ec40d045550bb 818 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 466 677 2.2E-134 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 177 188 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 55 188 7.5E-36 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 SUPERFAMILY SSF49329 46 188 4.19E-40 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 ProSitePatterns PS00087 Copper/Zinc superoxide dismutase signature 1. 86 96 - T 11-11-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 Gene3D G3DSA:2.60.40.200 48 191 4.6E-45 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 163 189 4.8E-6 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 86 108 4.8E-6 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS22525 f40d3573818f248cedaba58b13b3dca6 200 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 123 132 4.8E-6 T 11-11-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 Pfam PF00152 tRNA synthetases class II (D, K and N) 9 315 3.2E-34 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 204 220 2.2E-6 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 26 36 2.2E-6 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 PRINTS PR00982 Lysyl-tRNA synthetase signature 94 111 2.2E-6 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 11 315 1.4E-109 T 11-11-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 SUPERFAMILY SSF55681 9 315 1.78E-64 T 11-11-2016 ATY42_RS11960 46c386a70b2e85bf6886bbba7d52b19b 320 Gene3D G3DSA:3.30.930.10 9 315 4.6E-54 T 11-11-2016 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 SUPERFAMILY SSF46785 6 97 8.16E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Gene3D G3DSA:3.40.190.10 285 348 3.2E-8 T 11-11-2016 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 SUPERFAMILY SSF46785 102 214 2.54E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Gene3D G3DSA:3.40.190.10 192 284 2.1E-24 T 11-11-2016 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 3.0E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 3.0E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 3.0E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.7E-17 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 107 162 7.0E-12 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Gene3D G3DSA:1.10.10.10 7 81 8.2E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Pfam PF03466 LysR substrate binding domain 190 398 2.1E-30 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 SUPERFAMILY SSF53850 191 402 3.62E-36 T 11-11-2016 ATY42_RS22950 c4f7162024cc65bc7a0480069e0cfb75 435 Gene3D G3DSA:1.10.10.10 102 184 4.3E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS07175 efa2a33a773ea163297c9217d4790705 77 Pfam PF11745 Protein of unknown function (DUF3304) 2 29 1.5E-4 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS15670 6acd131d47fc5fa3b95dc4915b5c5a32 785 SUPERFAMILY SSF48208 275 662 7.48E-16 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS06965 b3d79917cb4e5c9f1e47495a587634b4 376 Gene3D G3DSA:3.40.50.300 105 347 3.0E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06965 b3d79917cb4e5c9f1e47495a587634b4 376 Pfam PF00437 Type II/IV secretion system protein 12 249 9.1E-34 T 11-11-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 ATY42_RS06965 b3d79917cb4e5c9f1e47495a587634b4 376 SUPERFAMILY SSF52540 8 341 2.54E-68 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS06965 b3d79917cb4e5c9f1e47495a587634b4 376 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 7 347 1.1E-134 T 11-11-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 ATY42_RS18575 0c18f185b6110e9803382bb7bd17d0c9 317 SUPERFAMILY SSF161098 33 300 4.77E-52 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS18575 0c18f185b6110e9803382bb7bd17d0c9 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 304 1.3E-15 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS18575 0c18f185b6110e9803382bb7bd17d0c9 317 Gene3D G3DSA:1.10.3720.10 38 306 1.4E-47 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS18575 0c18f185b6110e9803382bb7bd17d0c9 317 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 35 308 1.1E-118 T 11-11-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 ATY42_RS18575 0c18f185b6110e9803382bb7bd17d0c9 317 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 34 306 1.4E-86 T 11-11-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ATY42_RS11620 f777e880b7efa2b1a7b06939254978c6 79 Pfam PF08279 HTH domain 31 57 1.0E-4 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 ATY42_RS11620 f777e880b7efa2b1a7b06939254978c6 79 Gene3D G3DSA:1.10.10.10 31 59 1.5E-8 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.6E-37 T 11-11-2016 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.6E-37 T 11-11-2016 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.6E-37 T 11-11-2016 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 1.6E-37 T 11-11-2016 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.6E-37 T 11-11-2016 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 141 161 - T 11-11-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 13 35 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 134 146 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 67 77 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 204 220 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 243 264 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 46 61 1.2E-73 T 11-11-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 Gene3D G3DSA:3.50.50.60 10 124 2.0E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 13 318 5.9E-117 T 11-11-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 13 302 1.5E-47 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 SUPERFAMILY SSF51905 5 318 3.33E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS12630 b8084976815cc4562ac779709aede97e 322 Gene3D G3DSA:3.50.50.60 125 249 1.8E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS10020 ac3c225efec8df8c4364da7a9d9a7dbe 291 SMART SM00382 34 212 3.0E-13 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS10020 ac3c225efec8df8c4364da7a9d9a7dbe 291 Gene3D G3DSA:3.40.50.300 4 226 4.3E-45 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS10020 ac3c225efec8df8c4364da7a9d9a7dbe 291 SUPERFAMILY SSF52540 9 225 6.52E-43 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS10020 ac3c225efec8df8c4364da7a9d9a7dbe 291 Pfam PF00005 ABC transporter 25 162 1.1E-19 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS19735 8971919eecbfd5235f41dad26a3483ab 425 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 93 411 1.7E-127 T 11-11-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 ATY42_RS19735 8971919eecbfd5235f41dad26a3483ab 425 SUPERFAMILY SSF103473 11 414 9.81E-31 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS19735 8971919eecbfd5235f41dad26a3483ab 425 Gene3D G3DSA:1.20.1250.20 13 222 1.8E-14 T 11-11-2016 ATY42_RS19735 8971919eecbfd5235f41dad26a3483ab 425 Gene3D G3DSA:1.20.1250.20 237 411 1.8E-5 T 11-11-2016 ATY42_RS19735 8971919eecbfd5235f41dad26a3483ab 425 Pfam PF07690 Major Facilitator Superfamily 18 376 1.3E-13 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS12025 e6dcf7f2d18903b2eb7a23671ce12b08 107 SUPERFAMILY SSF50475 9 107 2.22E-11 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS12025 e6dcf7f2d18903b2eb7a23671ce12b08 107 Pfam PF04299 Putative FMN-binding domain 5 107 5.4E-22 T 11-11-2016 IPR007396 Transcriptional regulator PAI 2-type ATY42_RS12025 e6dcf7f2d18903b2eb7a23671ce12b08 107 Gene3D G3DSA:2.30.110.10 5 107 3.9E-23 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 SMART SM00812 87 509 1.8E-218 T 11-11-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 Pfam PF01120 Alpha-L-fucosidase 82 445 9.2E-100 T 11-11-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 PIRSF PIRSF001092 70 553 1.0E-88 T 11-11-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 Gene3D G3DSA:2.60.40.1180 473 555 8.8E-21 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 Gene3D G3DSA:3.20.20.80 85 449 5.3E-120 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 SUPERFAMILY SSF51445 87 449 6.53E-107 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS08670 395ff6d2bdde40239067c866ab719614 561 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 480 554 6.3E-6 T 11-11-2016 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 ATY42_RS03390 fd11102825ea92a3bad33d5dcc3ee2b1 237 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 64 223 8.0E-40 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS03390 fd11102825ea92a3bad33d5dcc3ee2b1 237 Pfam PF00849 RNA pseudouridylate synthase 61 137 4.5E-9 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS03390 fd11102825ea92a3bad33d5dcc3ee2b1 237 Gene3D G3DSA:3.10.290.10 1 53 5.1E-5 T 11-11-2016 IPR002942 RNA-binding S4 domain GO:0003723 ATY42_RS03390 fd11102825ea92a3bad33d5dcc3ee2b1 237 SUPERFAMILY SSF55120 61 225 3.04E-35 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS03925 a9c53b17c83bc0d9505f1685ed0f7802 155 Gene3D G3DSA:3.40.50.10220 111 147 6.7E-5 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS03925 a9c53b17c83bc0d9505f1685ed0f7802 155 SUPERFAMILY SSF102220 113 147 4.97E-5 T 11-11-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 Gene3D G3DSA:3.40.50.10470 163 347 5.4E-68 T 11-11-2016 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 Pfam PF01008 Initiation factor 2 subunit family 57 341 1.5E-75 T 11-11-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 14 352 38.797 T 11-11-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 SUPERFAMILY SSF100950 12 345 1.33E-113 T 11-11-2016 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 Gene3D G3DSA:1.20.120.420 15 162 2.6E-50 T 11-11-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 341 1.1E-111 T 11-11-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ATY42_RS11945 56ab267a3be50b9f2e3731d12494dddb 354 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 341 3.1E-136 T 11-11-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ATY42_RS21010 cfd4e1ded350f04c11285009f25bfdff 458 Pfam PF05598 Transposase domain (DUF772) 59 133 3.1E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21010 cfd4e1ded350f04c11285009f25bfdff 458 Pfam PF01609 Transposase DDE domain 283 416 2.1E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12865 62f4f2ac56f12fd120f6396b510a65b6 216 SUPERFAMILY SSF51161 4 208 1.37E-37 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS12865 62f4f2ac56f12fd120f6396b510a65b6 216 Gene3D G3DSA:2.160.10.10 88 208 9.9E-33 T 11-11-2016 ATY42_RS12865 62f4f2ac56f12fd120f6396b510a65b6 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 155 6.3E-8 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS12865 62f4f2ac56f12fd120f6396b510a65b6 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 158 191 3.3E-9 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS12865 62f4f2ac56f12fd120f6396b510a65b6 216 Gene3D G3DSA:3.40.50.20 1 87 3.6E-6 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS08615 58934d4dfd43cd42f02569c98e031e4a 372 SUPERFAMILY SSF56059 131 305 5.39E-8 T 11-11-2016 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Pfam PF00675 Insulinase (Peptidase family M16) 523 644 2.1E-6 T 11-11-2016 IPR011765 Peptidase M16, N-terminal ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Pfam PF00675 Insulinase (Peptidase family M16) 50 187 2.2E-15 T 11-11-2016 IPR011765 Peptidase M16, N-terminal ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 SUPERFAMILY SSF63411 499 728 4.02E-43 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 SUPERFAMILY SSF63411 267 457 8.83E-30 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 SUPERFAMILY SSF63411 739 930 2.5E-30 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Gene3D G3DSA:3.30.830.10 511 726 5.9E-43 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 SUPERFAMILY SSF63411 35 252 1.92E-50 T 11-11-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Pfam PF05193 Peptidase M16 inactive domain 678 858 2.8E-29 T 11-11-2016 IPR007863 Peptidase M16, C-terminal ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Pfam PF05193 Peptidase M16 inactive domain 207 380 6.6E-29 T 11-11-2016 IPR007863 Peptidase M16, C-terminal ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Gene3D G3DSA:3.30.830.10 33 257 8.3E-50 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Gene3D G3DSA:3.30.830.10 741 926 3.8E-22 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 ATY42_RS20200 0bcb8628727588ff1ca0f7f30fa46798 956 Gene3D G3DSA:3.30.830.10 281 449 5.3E-17 T 11-11-2016 IPR011237 Peptidase M16 domain GO:0046872 ATY42_RS01005 4811a164d4631d00b79dd5391157c5eb 205 Pfam PF02698 DUF218 domain 49 192 6.9E-30 T 11-11-2016 IPR003848 Domain of unknown function DUF218 ATY42_RS01005 4811a164d4631d00b79dd5391157c5eb 205 Gene3D G3DSA:3.40.50.620 43 175 8.5E-31 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS02560 a2221a928b1eea6b3f9f31ba43b04db5 193 Pfam PF14103 Domain of unknown function (DUF4276) 9 181 1.6E-11 T 11-11-2016 IPR025455 Protein of unknown function DUF4276 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 Gene3D G3DSA:3.30.70.980 132 203 2.9E-23 T 11-11-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 33.31 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 Gene3D G3DSA:3.30.1270.10 79 131 4.4E-39 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 Gene3D G3DSA:3.30.1270.10 210 236 4.4E-39 T 11-11-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 Pfam PF01709 Transcriptional regulator 7 235 1.6E-87 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 6 235 3.0E-87 T 11-11-2016 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 SUPERFAMILY SSF75625 7 236 2.09E-86 T 11-11-2016 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS08190 333b51e7eafe6c477a96690fc2609f29 242 Gene3D G3DSA:1.10.10.200 7 75 6.7E-26 T 11-11-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 176 374 1.2E-13 T 11-11-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 Gene3D G3DSA:3.90.380.10 134 352 1.6E-15 T 11-11-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 Pfam PF00355 Rieske [2Fe-2S] domain 38 109 3.5E-14 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 126 152 5.1E-9 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 82 102 5.1E-9 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 164 186 5.1E-9 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 12 37 5.1E-9 T 11-11-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 SUPERFAMILY SSF50022 4 142 4.06E-35 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 SUPERFAMILY SSF55961 149 371 2.04E-27 T 11-11-2016 ATY42_RS12870 165babeecc0637bc7dded7b0fb7e03b9 381 Gene3D G3DSA:2.102.10.10 28 133 7.2E-19 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS21275 8e79bbb4ff28c42ac440a731a71021c7 291 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 14 53 2.2E-8 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATY42_RS21275 8e79bbb4ff28c42ac440a731a71021c7 291 Gene3D G3DSA:1.10.443.10 70 270 2.9E-46 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS21275 8e79bbb4ff28c42ac440a731a71021c7 291 SUPERFAMILY SSF56349 178 272 3.24E-42 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS21275 8e79bbb4ff28c42ac440a731a71021c7 291 SUPERFAMILY SSF56349 64 150 3.24E-42 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS21275 8e79bbb4ff28c42ac440a731a71021c7 291 TIGRFAM TIGR02249 integrase_gron: integron integrase 12 284 3.8E-133 T 11-11-2016 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 ATY42_RS21275 8e79bbb4ff28c42ac440a731a71021c7 291 Pfam PF00589 Phage integrase family 70 270 2.0E-41 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS09630 49cabcad5a512a4b1473b6e6209cb6fe 256 Gene3D G3DSA:2.60.40.360 40 157 1.2E-18 T 11-11-2016 IPR008962 PapD-like ATY42_RS09630 49cabcad5a512a4b1473b6e6209cb6fe 256 SUPERFAMILY SSF49354 35 157 9.16E-26 T 11-11-2016 IPR008962 PapD-like ATY42_RS09630 49cabcad5a512a4b1473b6e6209cb6fe 256 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 40 157 4.8E-24 T 11-11-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 ATY42_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 Pfam PF00444 Ribosomal protein L36 1 40 2.1E-17 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 17 40 0.006 T 11-11-2016 ATY42_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 SUPERFAMILY SSF57840 1 40 8.24E-14 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 40 7.4E-9 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS10610 df2c3f277ab4e7ab89b585ac5b3153a1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 17.227 T 11-11-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS14685 5a422c16e52a97546d2c857594b5702a 70 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 55 1.4E-27 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 ATY42_RS14685 5a422c16e52a97546d2c857594b5702a 70 SUPERFAMILY SSF117130 1 53 8.89E-21 T 11-11-2016 ATY42_RS14685 5a422c16e52a97546d2c857594b5702a 70 Pfam PF02599 Global regulator protein family 1 52 4.8E-27 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 ATY42_RS14685 5a422c16e52a97546d2c857594b5702a 70 Hamap MF_00167 Carbon storage regulator [csrA]. 1 70 21.753 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 ATY42_RS14685 5a422c16e52a97546d2c857594b5702a 70 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 11-11-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 ATY42_RS14495 fffecf161b461a538b199509396e9a3a 159 Pfam PF13936 Helix-turn-helix domain 7 49 2.9E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS00805 e7bf65c2db67cb3a47a612441fa84019 285 SUPERFAMILY SSF53098 15 252 1.14E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00805 e7bf65c2db67cb3a47a612441fa84019 285 Pfam PF01609 Transposase DDE domain 3 212 3.5E-22 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 9.0E-19 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.7E-37 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.7E-37 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.7E-37 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-11-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 Pfam PF01016 Ribosomal L27 protein 2 82 8.2E-38 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.087 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 2.7E-37 T 11-11-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 Gene3D G3DSA:2.40.50.100 20 82 4.2E-30 T 11-11-2016 ATY42_RS07975 9a17d0b64bd6a2dbd4ec97f83ab654f0 86 SUPERFAMILY SSF110324 2 82 8.02E-34 T 11-11-2016 ATY42_RS22985 b5f7b659f63da6a9a4ebfe0874b6cbc7 471 Pfam PF13520 Amino acid permease 26 437 7.9E-56 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS22985 b5f7b659f63da6a9a4ebfe0874b6cbc7 471 PIRSF PIRSF006060 6 468 1.1E-84 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS04170 1927c00a4f581bab9181ab8a91b8dd97 251 Pfam PF13358 DDE superfamily endonuclease 171 251 3.2E-13 T 11-11-2016 ATY42_RS04170 1927c00a4f581bab9181ab8a91b8dd97 251 Pfam PF13592 Winged helix-turn helix 95 154 2.2E-17 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS04170 1927c00a4f581bab9181ab8a91b8dd97 251 Pfam PF13551 Winged helix-turn helix 18 77 6.4E-15 T 11-11-2016 ATY42_RS04170 1927c00a4f581bab9181ab8a91b8dd97 251 SUPERFAMILY SSF46689 11 129 6.09E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 215 4.2E-62 T 11-11-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 Gene3D G3DSA:1.10.150.240 21 83 8.3E-18 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 2.4E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 2.4E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.4E-6 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 79 184 6.2E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 180 8.6E-8 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 5.4E-36 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 SUPERFAMILY SSF56784 4 215 9.57E-58 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 Gene3D G3DSA:3.40.50.1000 84 214 3.2E-43 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03680 03040a0f5f8dd2f8a7270f7c1e0cc87c 216 Gene3D G3DSA:3.40.50.1000 3 20 3.2E-43 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS07125 d17f2eb3c861f7740a92cb6a1be5ead2 690 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 3.0E-36 T 11-11-2016 IPR025299 CstA, C-terminal domain ATY42_RS07125 d17f2eb3c861f7740a92cb6a1be5ead2 690 Pfam PF02554 Carbon starvation protein CstA 31 408 6.7E-164 T 11-11-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ATY42_RS07000 6f7075ac4a2d93269f6eeb237061b8c1 188 Gene3D G3DSA:3.40.1740.10 132 178 2.0E-30 T 11-11-2016 ATY42_RS07000 6f7075ac4a2d93269f6eeb237061b8c1 188 Gene3D G3DSA:3.40.1740.10 6 45 2.0E-30 T 11-11-2016 ATY42_RS07000 6f7075ac4a2d93269f6eeb237061b8c1 188 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 6 188 37.67 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 ATY42_RS07000 6f7075ac4a2d93269f6eeb237061b8c1 188 Gene3D G3DSA:3.30.70.1300 46 131 1.9E-28 T 11-11-2016 ATY42_RS07000 6f7075ac4a2d93269f6eeb237061b8c1 188 SUPERFAMILY SSF143456 6 188 8.76E-63 T 11-11-2016 ATY42_RS07000 6f7075ac4a2d93269f6eeb237061b8c1 188 Pfam PF02622 Uncharacterized ACR, COG1678 17 175 9.9E-49 T 11-11-2016 IPR003774 Protein of unknown function UPF0301 ATY42_RS04220 a25d61d414faf6d56f85f41a7fc1eed1 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 184 1.8E-46 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS04220 a25d61d414faf6d56f85f41a7fc1eed1 191 PIRSF PIRSF006305 1 190 1.3E-41 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS04220 a25d61d414faf6d56f85f41a7fc1eed1 191 Gene3D G3DSA:3.90.950.10 2 188 1.8E-54 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ATY42_RS04220 a25d61d414faf6d56f85f41a7fc1eed1 191 Pfam PF02545 Maf-like protein 4 185 5.8E-42 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS04220 a25d61d414faf6d56f85f41a7fc1eed1 191 Hamap MF_00528 Septum formation protein Maf [maf]. 4 190 28.461 T 11-11-2016 IPR003697 Maf-like protein GO:0005737 ATY42_RS04220 a25d61d414faf6d56f85f41a7fc1eed1 191 SUPERFAMILY SSF52972 1 185 3.01E-53 T 11-11-2016 IPR029001 Inosine triphosphate pyrophosphatase-like ATY42_RS11815 7ec33d377daa02a8eee543c63dbecec4 494 Pfam PF02321 Outer membrane efflux protein 294 477 2.4E-22 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS11815 7ec33d377daa02a8eee543c63dbecec4 494 Pfam PF02321 Outer membrane efflux protein 78 266 1.7E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS11815 7ec33d377daa02a8eee543c63dbecec4 494 SUPERFAMILY SSF56954 69 481 1.7E-95 T 11-11-2016 ATY42_RS11815 7ec33d377daa02a8eee543c63dbecec4 494 SUPERFAMILY SSF56954 3 32 1.7E-95 T 11-11-2016 ATY42_RS11815 7ec33d377daa02a8eee543c63dbecec4 494 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 13 479 2.7E-129 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ATY42_RS11815 7ec33d377daa02a8eee543c63dbecec4 494 Gene3D G3DSA:1.20.1600.10 67 480 6.0E-94 T 11-11-2016 ATY42_RS05680 90613581e52619cb480509eac336033d 341 Pfam PF13358 DDE superfamily endonuclease 171 307 5.1E-30 T 11-11-2016 ATY42_RS05680 90613581e52619cb480509eac336033d 341 SUPERFAMILY SSF46689 11 129 5.91E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS05680 90613581e52619cb480509eac336033d 341 Pfam PF13592 Winged helix-turn helix 95 153 1.6E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS05680 90613581e52619cb480509eac336033d 341 Pfam PF13551 Winged helix-turn helix 18 77 8.9E-15 T 11-11-2016 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 Gene3D G3DSA:2.30.42.10 318 412 2.2E-27 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 Gene3D G3DSA:2.30.42.10 435 525 1.0E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 Pfam PF13180 PDZ domain 316 406 9.7E-17 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 Pfam PF13365 Trypsin-like peptidase domain 141 276 6.1E-38 T 11-11-2016 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 PRINTS PR00834 HtrA/DegQ protease family signature 355 367 6.1E-50 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 PRINTS PR00834 HtrA/DegQ protease family signature 269 286 6.1E-50 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 PRINTS PR00834 HtrA/DegQ protease family signature 171 191 6.1E-50 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 PRINTS PR00834 HtrA/DegQ protease family signature 150 162 6.1E-50 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 PRINTS PR00834 HtrA/DegQ protease family signature 211 235 6.1E-50 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 PRINTS PR00834 HtrA/DegQ protease family signature 247 264 6.1E-50 T 11-11-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 SUPERFAMILY SSF50156 297 406 5.06E-21 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 SUPERFAMILY SSF50156 435 525 6.02E-7 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 53 523 2.3E-148 T 11-11-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 Gene3D G3DSA:2.40.10.10 53 202 4.1E-37 T 11-11-2016 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 SMART SM00228 434 517 5.3 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 SMART SM00228 315 397 7.6E-11 T 11-11-2016 IPR001478 PDZ domain GO:0005515 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 Gene3D G3DSA:2.40.10.10 203 317 3.6E-43 T 11-11-2016 ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 SUPERFAMILY SSF50494 49 77 7.78E-64 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS08970 026d1ccb970488f79fcf43956f38b144 528 SUPERFAMILY SSF50494 138 323 7.78E-64 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS18490 b67dbda599a8768c6aef5a7d3fa0ca4d 180 Pfam PF01569 PAP2 superfamily 68 173 3.9E-20 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS18490 b67dbda599a8768c6aef5a7d3fa0ca4d 180 Gene3D G3DSA:1.20.144.10 16 173 1.8E-37 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS18490 b67dbda599a8768c6aef5a7d3fa0ca4d 180 SUPERFAMILY SSF48317 12 173 2.88E-34 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS18490 b67dbda599a8768c6aef5a7d3fa0ca4d 180 SMART SM00014 63 172 1.1E-14 T 11-11-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 384 399 9.5E-23 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 9.5E-23 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 9.5E-23 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 9.5E-23 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 399 414 9.5E-23 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 331 354 9.5E-23 T 11-11-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 Gene3D G3DSA:2.40.50.100 249 291 4.7E-13 T 11-11-2016 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 Gene3D G3DSA:2.40.50.100 66 98 4.7E-13 T 11-11-2016 ATY42_RS08610 85202093dcdd8d753ac8f79d8631bc63 414 Pfam PF13437 HlyD family secretion protein 262 347 1.2E-13 T 11-11-2016 ATY42_RS00390 42ccbb7e073d85daec9b0c5d8e49d501 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 101 1.0E-6 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS00390 42ccbb7e073d85daec9b0c5d8e49d501 113 SUPERFAMILY SSF69754 1 96 4.19E-9 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS00390 42ccbb7e073d85daec9b0c5d8e49d501 113 Gene3D G3DSA:3.30.160.100 1 103 1.2E-9 T 11-11-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 ATY42_RS06935 230965e80e7442a321bb19ef63ef314c 141 Pfam PF00216 Bacterial DNA-binding protein 45 139 2.2E-13 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS06935 230965e80e7442a321bb19ef63ef314c 141 Gene3D G3DSA:4.10.520.10 45 139 6.9E-14 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS06935 230965e80e7442a321bb19ef63ef314c 141 SMART SM00411 44 141 1.2E-4 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS06935 230965e80e7442a321bb19ef63ef314c 141 SUPERFAMILY SSF47729 44 139 3.83E-12 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS23065 e694763307c31502623f6c3c0a96c877 411 Pfam PF01551 Peptidase family M23 311 404 1.2E-27 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS23065 e694763307c31502623f6c3c0a96c877 411 SUPERFAMILY SSF51261 188 408 2.09E-45 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS23065 e694763307c31502623f6c3c0a96c877 411 Gene3D G3DSA:2.70.70.10 272 409 1.7E-37 T 11-11-2016 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 Gene3D G3DSA:1.20.1560.10 170 471 1.1E-53 T 11-11-2016 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 Gene3D G3DSA:3.40.50.300 487 713 4.3E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 SUPERFAMILY SSF52540 482 700 9.53E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 SMART SM00382 513 697 9.5E-20 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 Pfam PF00664 ABC transporter transmembrane region 176 440 4.2E-27 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 Pfam PF00005 ABC transporter 504 653 5.8E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 Gene3D G3DSA:3.90.70.10 27 144 2.4E-23 T 11-11-2016 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 Pfam PF03412 Peptidase C39 family 18 145 1.8E-34 T 11-11-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 ProSitePatterns PS00211 ABC transporters family signature. 625 639 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS17840 a277d32e33cdcc3926e409948cf02bdb 719 SUPERFAMILY SSF90123 169 474 1.06E-50 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS12305 8332d29a49aa20b553aaf4512a00e24b 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 66 84 1.9E-13 T 11-11-2016 IPR003849 Preprotein translocase YajC ATY42_RS12305 8332d29a49aa20b553aaf4512a00e24b 117 PRINTS PR01853 Bacterial YajC preprotein translocase signature 28 48 1.9E-13 T 11-11-2016 IPR003849 Preprotein translocase YajC ATY42_RS12305 8332d29a49aa20b553aaf4512a00e24b 117 Pfam PF02699 Preprotein translocase subunit 31 104 1.2E-28 T 11-11-2016 IPR003849 Preprotein translocase YajC ATY42_RS12305 8332d29a49aa20b553aaf4512a00e24b 117 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 29 108 4.1E-27 T 11-11-2016 IPR003849 Preprotein translocase YajC ATY42_RS12305 8332d29a49aa20b553aaf4512a00e24b 117 SMART SM01323 26 108 1.8E-44 T 11-11-2016 IPR003849 Preprotein translocase YajC ATY42_RS12990 788e4d71111f8c023a15c7635dbe7b23 294 PIRSF PIRSF003092 2 292 1.1E-81 T 11-11-2016 IPR025501 ATP binding protein MinD ATY42_RS12990 788e4d71111f8c023a15c7635dbe7b23 294 Gene3D G3DSA:3.40.50.300 27 266 4.7E-58 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12990 788e4d71111f8c023a15c7635dbe7b23 294 SUPERFAMILY SSF52540 27 282 1.47E-54 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12990 788e4d71111f8c023a15c7635dbe7b23 294 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 29 215 2.0E-26 T 11-11-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ATY42_RS09440 2b168cc8bbaa3d822f040f082e415d25 491 Pfam PF05598 Transposase domain (DUF772) 75 149 1.6E-15 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Gene3D G3DSA:3.40.50.10070 27 155 1.0E-45 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 21 433 1.8E-159 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Gene3D G3DSA:2.130.10.10 156 434 1.1E-71 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Pfam PF04052 TolB amino-terminal domain 27 132 2.4E-30 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Pfam PF07676 WD40-like Beta Propeller Repeat 284 320 1.2E-14 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Pfam PF07676 WD40-like Beta Propeller Repeat 243 276 1.3E-8 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Pfam PF07676 WD40-like Beta Propeller Repeat 209 231 7.7E-6 T 11-11-2016 IPR011659 WD40-like Beta Propeller ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 SUPERFAMILY SSF69304 157 434 3.01E-53 T 11-11-2016 ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 Hamap MF_00671 Protein TolB [tolB]. 8 432 36.559 T 11-11-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 ATY42_RS08235 1e5cfa2b03b0bb3ae6c5aedea8f539a5 439 SUPERFAMILY SSF52964 34 164 7.98E-35 T 11-11-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 TIGRFAM TIGR01229 rocF_arginase: arginase 9 303 3.0E-88 T 11-11-2016 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 SUPERFAMILY SSF52768 8 302 8.82E-90 T 11-11-2016 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 Pfam PF00491 Arginase family 8 299 1.0E-75 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 11-11-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 PIRSF PIRSF036979 2 303 6.9E-34 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 PRINTS PR00116 Arginase signature 97 112 4.4E-45 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 PRINTS PR00116 Arginase signature 261 275 4.4E-45 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 PRINTS PR00116 Arginase signature 226 255 4.4E-45 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 PRINTS PR00116 Arginase signature 124 151 4.4E-45 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 PRINTS PR00116 Arginase signature 178 196 4.4E-45 T 11-11-2016 IPR006035 Ureohydrolase GO:0046872 ATY42_RS02000 437b09e913c96fd07cfcd2e250c75093 307 Gene3D G3DSA:3.40.800.10 7 301 2.2E-88 T 11-11-2016 IPR023696 Ureohydrolase domain ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 2.8E-39 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 2.8E-39 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 2.8E-39 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 2.8E-39 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 2.8E-39 T 11-11-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 504 44.02 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 SUPERFAMILY SSF50249 13 155 8.78E-38 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 163 501 1.8E-82 T 11-11-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 SUPERFAMILY SSF55681 162 502 3.83E-118 T 11-11-2016 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 Gene3D G3DSA:2.40.50.140 15 154 1.0E-41 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 Pfam PF01336 OB-fold nucleic acid binding domain 70 145 2.6E-14 T 11-11-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 Gene3D G3DSA:3.30.930.10 157 499 2.7E-119 T 11-11-2016 ATY42_RS14345 710fa4e9c662b86bd9fe8fb9949e6fe6 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 15 504 2.0E-199 T 11-11-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 SMART SM00448 8 118 7.2E-38 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 SUPERFAMILY SSF52172 9 127 1.15E-37 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 SMART SM00862 150 223 1.9E-14 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 Gene3D G3DSA:3.40.50.2300 9 126 1.8E-37 T 11-11-2016 ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 SUPERFAMILY SSF46894 135 224 1.36E-18 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 Gene3D G3DSA:1.10.10.10 136 225 2.7E-22 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 222 8.2E-17 T 11-11-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ATY42_RS21800 e67ea4e5cab05134d3dbfe8a4cf13ed6 235 Pfam PF00072 Response regulator receiver domain 10 118 6.3E-26 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS13820 8e989a4f14ea99f77783fe4eae06d7b0 426 Pfam PF00083 Sugar (and other) transporter 19 225 6.5E-20 T 11-11-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATY42_RS13820 8e989a4f14ea99f77783fe4eae06d7b0 426 SUPERFAMILY SSF103473 8 424 4.45E-59 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS13820 8e989a4f14ea99f77783fe4eae06d7b0 426 Pfam PF07690 Major Facilitator Superfamily 271 419 4.5E-9 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS13820 8e989a4f14ea99f77783fe4eae06d7b0 426 Gene3D G3DSA:1.20.1250.20 242 422 2.6E-18 T 11-11-2016 ATY42_RS13820 8e989a4f14ea99f77783fe4eae06d7b0 426 Gene3D G3DSA:1.20.1250.20 16 219 4.1E-18 T 11-11-2016 ATY42_RS14905 ae35b68e1eeff52c47bb678d50ac451d 352 Gene3D G3DSA:3.40.50.300 164 295 4.5E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14905 ae35b68e1eeff52c47bb678d50ac451d 352 SUPERFAMILY SSF53795 165 211 3.97E-9 T 11-11-2016 ATY42_RS15115 ae87d873c0241539fdff36422fdc38ea 1373 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 980 1128 5.4E-69 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS15115 ae87d873c0241539fdff36422fdc38ea 1373 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 675 877 4.1E-133 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS15115 ae87d873c0241539fdff36422fdc38ea 1373 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 302 504 2.1E-133 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS00645 c4671601b58e43305da826fee54c386f 132 Pfam PF10116 Protein required for attachment to host cells 10 131 1.3E-23 T 11-11-2016 IPR019291 Host attachment protein ATY42_RS04215 81bf3b111d1a74fe58522a49a03f1e10 321 SMART SM01126 137 282 1.4E-48 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04215 81bf3b111d1a74fe58522a49a03f1e10 321 Pfam PF12760 Transposase zinc-ribbon domain 25 69 3.6E-6 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS04215 81bf3b111d1a74fe58522a49a03f1e10 321 Pfam PF12762 ISXO2-like transposase domain 137 282 1.3E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS12120 6d7e71a396c30b7931b67c7966ead02b 168 SUPERFAMILY SSF55729 5 156 3.49E-24 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS12120 6d7e71a396c30b7931b67c7966ead02b 168 Gene3D G3DSA:3.40.630.30 1 131 1.1E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS12120 6d7e71a396c30b7931b67c7966ead02b 168 Pfam PF00583 Acetyltransferase (GNAT) family 54 128 4.1E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS20835 40f4f912952906476b6bd133d8dcd1eb 191 SUPERFAMILY SSF52833 69 189 2.54E-7 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS05950 a3100411348242356cbcbe4e4f071512 205 Gene3D G3DSA:3.40.50.1000 6 190 3.9E-27 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS05950 a3100411348242356cbcbe4e4f071512 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 131 186 1.1E-5 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS05950 a3100411348242356cbcbe4e4f071512 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 139 186 9.2E-10 T 11-11-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 ATY42_RS05950 a3100411348242356cbcbe4e4f071512 205 SUPERFAMILY SSF56784 9 196 6.15E-28 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 SUPERFAMILY SSF49303 248 340 4.89E-14 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 SUPERFAMILY SSF49785 51 226 1.04E-38 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Pfam PF00703 Glycosyl hydrolases family 2 248 340 8.0E-11 T 11-11-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 440 454 - T 11-11-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Gene3D G3DSA:2.60.40.320 217 341 1.6E-20 T 11-11-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Gene3D G3DSA:2.60.40.1560 630 719 1.1E-27 T 11-11-2016 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Gene3D G3DSA:2.60.120.260 48 216 1.6E-36 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 SUPERFAMILY SSF51445 345 623 3.89E-64 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 347 422 2.5E-9 T 11-11-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 429 512 3.9E-10 T 11-11-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Pfam PF16355 Domain of unknown function (DUF4982) 643 701 2.1E-17 T 11-11-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Gene3D G3DSA:3.20.20.80 345 623 3.8E-64 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS19755 17ab93bb7c74a21e6bf9331daed2f462 965 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 95 224 4.9E-14 T 11-11-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ATY42_RS06840 31a6c85053a8ac91e20f904ca8812d61 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.1E-8 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS06840 31a6c85053a8ac91e20f904ca8812d61 338 SMART SM01126 154 299 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS06840 31a6c85053a8ac91e20f904ca8812d61 338 Pfam PF12762 ISXO2-like transposase domain 154 299 3.4E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS07135 4e430195d870ac20b25bf00dd6a0fc2f 92 Gene3D G3DSA:3.30.300.20 2 67 6.7E-12 T 11-11-2016 IPR015946 K homology domain-like, alpha/beta ATY42_RS07135 4e430195d870ac20b25bf00dd6a0fc2f 92 SUPERFAMILY SSF82784 2 67 9.16E-12 T 11-11-2016 IPR003718 OsmC/Ohr family ATY42_RS07135 4e430195d870ac20b25bf00dd6a0fc2f 92 Pfam PF02566 OsmC-like protein 2 66 7.0E-6 T 11-11-2016 IPR003718 OsmC/Ohr family ATY42_RS07070 bec0c40d0b2db5b22c9c279ca0be36bf 264 Pfam PF01738 Dienelactone hydrolase family 44 260 8.0E-37 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 ATY42_RS07070 bec0c40d0b2db5b22c9c279ca0be36bf 264 SUPERFAMILY SSF53474 30 260 5.86E-37 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS07070 bec0c40d0b2db5b22c9c279ca0be36bf 264 Gene3D G3DSA:3.40.50.1820 25 260 5.7E-43 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 243 256 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 456 473 - T 11-11-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 Gene3D G3DSA:1.10.1390.10 466 503 7.7E-13 T 11-11-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 Gene3D G3DSA:3.40.50.10490 108 269 1.5E-49 T 11-11-2016 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 316 337 7.0E-46 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 424 442 7.0E-46 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 456 469 7.0E-46 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 134 153 7.0E-46 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 239 257 7.0E-46 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 PRINTS PR00662 Glucose-6-phosphate isomerase signature 442 456 7.0E-46 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 40 483 37.816 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 Gene3D G3DSA:3.40.50.10490 271 465 1.0E-100 T 11-11-2016 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 Gene3D G3DSA:3.40.50.10490 5 92 1.0E-100 T 11-11-2016 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 Pfam PF00342 Phosphoglucose isomerase 47 487 2.8E-150 T 11-11-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS11730 f4e1472b3b1c82ef9577cbb7eeaa9fd4 504 SUPERFAMILY SSF53697 2 496 8.9E-154 T 11-11-2016 ATY42_RS15515 90d0c22dddfc9206887d01872973d9a8 320 SMART SM01126 137 285 2.9E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS15515 90d0c22dddfc9206887d01872973d9a8 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.1E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS15515 90d0c22dddfc9206887d01872973d9a8 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS05160 a4dc45ca434185caf7e20dd9380b10b7 177 PIRSF PIRSF004982 1 177 1.8E-51 T 11-11-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 ATY42_RS05160 a4dc45ca434185caf7e20dd9380b10b7 177 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 176 6.2E-28 T 11-11-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 ATY42_RS05160 a4dc45ca434185caf7e20dd9380b10b7 177 Pfam PF03843 Outer membrane lipoprotein Slp family 15 162 5.5E-45 T 11-11-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 ATY42_RS07645 2910b21fcf2a47b65124ccbc6bc2a00d 166 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 9.4E-40 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATY42_RS07645 2910b21fcf2a47b65124ccbc6bc2a00d 166 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 2.6E-64 T 11-11-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 ATY42_RS07645 2910b21fcf2a47b65124ccbc6bc2a00d 166 Gene3D G3DSA:3.50.30.40 2 157 6.1E-51 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATY42_RS07645 2910b21fcf2a47b65124ccbc6bc2a00d 166 SUPERFAMILY SSF89562 3 157 1.96E-46 T 11-11-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 SUPERFAMILY SSF52058 140 379 1.28E-38 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 Pfam PF13855 Leucine rich repeat 305 364 1.1E-6 T 11-11-2016 IPR001611 Leucine-rich repeat GO:0005515 ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 Gene3D G3DSA:3.80.10.10 145 380 1.9E-40 T 11-11-2016 IPR032675 Leucine-rich repeat domain, L domain-like ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 SMART SM00369 351 374 16.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 SMART SM00369 209 232 240.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 SMART SM00369 162 185 180.0 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS00545 25f5ab59a6335990c84d04b679872e3a 646 SMART SM00369 303 327 4.8 T 11-11-2016 IPR003591 Leucine-rich repeat, typical subtype ATY42_RS20760 6b60d19700abaacfea5876ddb8e5536e 118 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 3.3E-24 T 11-11-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS20760 6b60d19700abaacfea5876ddb8e5536e 118 SMART SM00905 4 114 2.8E-47 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS20760 6b60d19700abaacfea5876ddb8e5536e 118 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.5E-30 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS20760 6b60d19700abaacfea5876ddb8e5536e 118 SUPERFAMILY SSF55620 1 116 5.56E-36 T 11-11-2016 ATY42_RS20760 6b60d19700abaacfea5876ddb8e5536e 118 Gene3D G3DSA:3.30.1130.10 1 116 2.2E-40 T 11-11-2016 ATY42_RS20760 6b60d19700abaacfea5876ddb8e5536e 118 TIGRFAM TIGR00526 folB_dom: FolB domain 1 116 1.3E-32 T 11-11-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 SUPERFAMILY SSF56059 114 314 2.65E-58 T 11-11-2016 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 SUPERFAMILY SSF51246 325 396 1.4E-14 T 11-11-2016 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 Gene3D G3DSA:3.30.470.20 200 392 8.2E-67 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 Gene3D G3DSA:3.30.1490.20 124 199 6.4E-27 T 11-11-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 397 51.442 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 396 1.9E-175 T 11-11-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 Gene3D G3DSA:3.40.50.20 4 121 2.9E-39 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 Pfam PF02222 ATP-grasp domain 124 295 2.5E-55 T 11-11-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ATY42_RS17715 c05e6c0edb00defbb81858e3cf9e190c 400 SUPERFAMILY SSF52440 3 113 4.75E-33 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 326 492 1.6E-49 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 491 2.4E-48 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 SMART SM00267 318 494 1.4E-62 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 SUPERFAMILY SSF55073 334 492 4.24E-47 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 Gene3D G3DSA:3.30.70.270 332 492 4.1E-52 T 11-11-2016 ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 Pfam PF02743 Cache domain 44 267 4.4E-21 T 11-11-2016 IPR033479 Double Cache domain 1 ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 Gene3D G3DSA:3.30.450.20 90 172 3.0E-14 T 11-11-2016 ATY42_RS07085 6a206fede3d69b667bbc82722afabcff 494 Gene3D G3DSA:3.30.450.20 173 287 4.8E-11 T 11-11-2016 ATY42_RS10270 a6fa462b319c496248b827f2018f2e52 87 SUPERFAMILY SSF46689 2 66 3.05E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS10270 a6fa462b319c496248b827f2018f2e52 87 Gene3D G3DSA:1.10.10.60 7 83 2.7E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS10270 a6fa462b319c496248b827f2018f2e52 87 Pfam PF01527 Transposase 2 70 3.7E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 SUPERFAMILY SSF56601 1 293 8.15E-81 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 133 150 2.9E-16 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 75 86 2.9E-16 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 160 173 2.9E-16 T 11-11-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 47 273 1.1E-79 T 11-11-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 Gene3D G3DSA:3.40.710.10 39 292 2.5E-95 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 SMART SM00936 293 383 7.9E-34 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 Gene3D G3DSA:2.60.410.10 293 383 2.6E-30 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 SUPERFAMILY SSF69189 293 385 1.18E-26 T 11-11-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATY42_RS19895 84bdbdffc9a6fe88f0cb473056e51ef7 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 293 383 3.6E-27 T 11-11-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ATY42_RS21225 a62f64171d28dc992df95f6ce858b2dd 556 Gene3D G3DSA:3.40.50.980 183 329 7.4E-24 T 11-11-2016 ATY42_RS21225 a62f64171d28dc992df95f6ce858b2dd 556 Pfam PF00501 AMP-binding enzyme 15 444 2.4E-62 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ATY42_RS21225 a62f64171d28dc992df95f6ce858b2dd 556 SUPERFAMILY SSF56801 6 514 8.5E-85 T 11-11-2016 ATY42_RS21225 a62f64171d28dc992df95f6ce858b2dd 556 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 11-11-2016 IPR020845 AMP-binding, conserved site ATY42_RS21225 a62f64171d28dc992df95f6ce858b2dd 556 Gene3D G3DSA:2.30.38.10 347 437 2.5E-13 T 11-11-2016 ATY42_RS21225 a62f64171d28dc992df95f6ce858b2dd 556 Gene3D G3DSA:3.40.50.980 10 182 4.0E-33 T 11-11-2016 ATY42_RS19130 944e856e1d4e9b7876fdcc2aa8c6717d 185 Pfam PF11539 Protein of unknown function (DUF3228) 3 183 5.7E-62 T 11-11-2016 IPR021610 Protein of unknown function DUF3228 ATY42_RS22695 a9a3d8b036f0f243eafaaf00754e9d92 271 Pfam PF12762 ISXO2-like transposase domain 148 270 9.6E-22 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22695 a9a3d8b036f0f243eafaaf00754e9d92 271 SMART SM01126 148 270 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS22695 a9a3d8b036f0f243eafaaf00754e9d92 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS22890 27f6995960f20065a2cc8b986842cf11 523 Gene3D G3DSA:3.60.21.10 136 520 3.9E-30 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS22890 27f6995960f20065a2cc8b986842cf11 523 Pfam PF09423 PhoD-like phosphatase 159 502 2.1E-82 T 11-11-2016 IPR018946 Alkaline phosphatase D-related ATY42_RS22890 27f6995960f20065a2cc8b986842cf11 523 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 44 120 6.1E-18 T 11-11-2016 IPR032093 Phospholipase D, N-terminal ATY42_RS22890 27f6995960f20065a2cc8b986842cf11 523 SUPERFAMILY SSF56300 138 515 2.3E-44 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS17920 245802e961753b40a5362c89d9cab0ea 127 Gene3D G3DSA:3.90.1030.10 1 117 4.9E-49 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17920 245802e961753b40a5362c89d9cab0ea 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.193 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17920 245802e961753b40a5362c89d9cab0ea 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 4.5E-46 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17920 245802e961753b40a5362c89d9cab0ea 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17920 245802e961753b40a5362c89d9cab0ea 127 SUPERFAMILY SSF64263 1 119 3.66E-50 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS17920 245802e961753b40a5362c89d9cab0ea 127 Pfam PF01196 Ribosomal protein L17 20 116 9.9E-33 T 11-11-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS20690 4b3827092d78ddf8f6d077b1f0141615 411 Pfam PF01610 Transposase 155 390 2.0E-62 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS20690 4b3827092d78ddf8f6d077b1f0141615 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS20930 095e9fcaaa72c11758d568eca7ce6f39 217 SUPERFAMILY SSF47240 56 190 2.11E-16 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS20930 095e9fcaaa72c11758d568eca7ce6f39 217 Gene3D G3DSA:1.20.1260.10 64 189 2.0E-9 T 11-11-2016 IPR012347 Ferritin-related ATY42_RS20930 095e9fcaaa72c11758d568eca7ce6f39 217 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 57 215 1.5E-38 T 11-11-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 ATY42_RS20930 095e9fcaaa72c11758d568eca7ce6f39 217 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 17 217 30.141 T 11-11-2016 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 ATY42_RS06440 af9f29cc43e07fecb31263caeb470c17 274 Pfam PF05962 HutD 156 264 2.3E-17 T 11-11-2016 IPR010282 Uncharacterised protein family HutD/Ves ATY42_RS06440 af9f29cc43e07fecb31263caeb470c17 274 Pfam PF05962 HutD 14 83 8.1E-23 T 11-11-2016 IPR010282 Uncharacterised protein family HutD/Ves ATY42_RS06440 af9f29cc43e07fecb31263caeb470c17 274 Gene3D G3DSA:2.60.120.10 156 194 2.5E-43 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS06440 af9f29cc43e07fecb31263caeb470c17 274 Gene3D G3DSA:2.60.120.10 14 79 2.5E-43 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS06440 af9f29cc43e07fecb31263caeb470c17 274 SUPERFAMILY SSF51182 8 88 3.47E-22 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS06440 af9f29cc43e07fecb31263caeb470c17 274 SUPERFAMILY SSF51182 154 271 1.6E-21 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS23095 892f15d0f64ea316eff5b0e6faa0d84d 148 Pfam PF01609 Transposase DDE domain 39 115 7.7E-6 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS18090 7c8b5793869f07292f848c74146b91db 177 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 25.116 T 11-11-2016 IPR022973 Ribosomal protein L10 ATY42_RS18090 7c8b5793869f07292f848c74146b91db 177 Pfam PF00466 Ribosomal protein L10 6 101 1.6E-22 T 11-11-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ATY42_RS18090 7c8b5793869f07292f848c74146b91db 177 SUPERFAMILY SSF160369 4 160 5.49E-43 T 11-11-2016 ATY42_RS16400 3cebb109c105f0e7e126d8085711d401 216 SUPERFAMILY SSF52833 47 211 9.34E-40 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16400 3cebb109c105f0e7e126d8085711d401 216 Pfam PF02630 SCO1/SenC 52 190 3.8E-21 T 11-11-2016 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS16400 3cebb109c105f0e7e126d8085711d401 216 Gene3D G3DSA:3.40.30.10 9 212 6.0E-47 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS07205 a5d228a6831422237672b0f338ec54b9 296 PIRSF PIRSF006232 1 280 9.5E-88 T 11-11-2016 IPR012093 Pirin ATY42_RS07205 a5d228a6831422237672b0f338ec54b9 296 Pfam PF02678 Pirin 16 120 1.3E-33 T 11-11-2016 IPR003829 Pirin, N-terminal domain ATY42_RS07205 a5d228a6831422237672b0f338ec54b9 296 Gene3D G3DSA:2.60.120.10 7 244 4.7E-63 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS07205 a5d228a6831422237672b0f338ec54b9 296 Pfam PF05726 Pirin C-terminal cupin domain 174 272 4.0E-27 T 11-11-2016 IPR008778 Pirin, C-terminal domain ATY42_RS07205 a5d228a6831422237672b0f338ec54b9 296 SUPERFAMILY SSF51182 3 284 2.05E-78 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS16640 5c4a6b4c4dba19c20e7e21000285945f 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 155 1.6E-53 T 11-11-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS16640 5c4a6b4c4dba19c20e7e21000285945f 156 Gene3D G3DSA:3.40.1280.10 1 155 2.4E-53 T 11-11-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ATY42_RS16640 5c4a6b4c4dba19c20e7e21000285945f 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.789 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS16640 5c4a6b4c4dba19c20e7e21000285945f 156 PIRSF PIRSF004505 1 155 1.8E-45 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS16640 5c4a6b4c4dba19c20e7e21000285945f 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 3.9E-48 T 11-11-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 ATY42_RS16640 5c4a6b4c4dba19c20e7e21000285945f 156 SUPERFAMILY SSF75217 1 153 1.47E-47 T 11-11-2016 IPR029028 Alpha/beta knot methyltransferases ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Gene3D G3DSA:2.130.10.10 74 165 1.0E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Pfam PF05593 RHS Repeat 193 229 8.9E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Pfam PF05593 RHS Repeat 361 395 3.3E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Pfam PF05593 RHS Repeat 341 376 1.8E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Pfam PF05593 RHS Repeat 151 188 2.2E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Pfam PF05593 RHS Repeat 109 146 1.7E-11 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 Pfam PF05593 RHS Repeat 235 271 1.8E-9 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 SUPERFAMILY SSF69304 99 214 1.23E-7 T 11-11-2016 ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 319 360 1.3E-8 T 11-11-2016 IPR006530 YD repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 109 148 3.4E-8 T 11-11-2016 IPR006530 YD repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 277 317 7.8E-5 T 11-11-2016 IPR006530 YD repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 152 189 1.0E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 361 397 7.4E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 235 276 3.0E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS08075 cdecec7eccc45ed4c899424e1695d7b4 546 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 193 233 3.1E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS06890 25d763b749a8e66f6beef6f3823f2bdf 152 Pfam PF02082 Transcriptional regulator 3 82 5.1E-22 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type ATY42_RS06890 25d763b749a8e66f6beef6f3823f2bdf 152 Gene3D G3DSA:1.10.10.10 3 136 2.5E-37 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS06890 25d763b749a8e66f6beef6f3823f2bdf 152 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 131 3.0E-30 T 11-11-2016 IPR000944 Transcription regulator Rrf2-type ATY42_RS06890 25d763b749a8e66f6beef6f3823f2bdf 152 SUPERFAMILY SSF46785 3 134 1.04E-32 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS06890 25d763b749a8e66f6beef6f3823f2bdf 152 TIGRFAM TIGR02944 suf_reg_Xantho: FeS assembly SUF system regulator 1 130 1.8E-61 T 11-11-2016 IPR014290 SUF system FeS cluster assembly regulator ATY42_RS16455 6949c64e67e7493456f30d527689385f 144 Pfam PF01230 HIT domain 21 109 7.9E-9 T 11-11-2016 IPR001310 Histidine triad (HIT) protein ATY42_RS16455 6949c64e67e7493456f30d527689385f 144 PIRSF PIRSF000714 12 144 3.9E-49 T 11-11-2016 IPR026026 Histidine triad hydrolase, Hint-type ATY42_RS16455 6949c64e67e7493456f30d527689385f 144 SUPERFAMILY SSF54197 14 143 4.25E-29 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 ATY42_RS16455 6949c64e67e7493456f30d527689385f 144 Gene3D G3DSA:3.30.428.10 12 143 1.4E-27 T 11-11-2016 IPR011146 HIT-like domain GO:0003824 ATY42_RS22385 9a2918cc9234395b37d4829b0d833454 287 Pfam PF11101 Protein of unknown function (DUF2884) 51 262 7.2E-30 T 11-11-2016 IPR021307 Protein of unknown function DUF2884 ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 Gene3D G3DSA:3.40.50.980 149 316 4.9E-27 T 11-11-2016 ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 ProSitePatterns PS00455 Putative AMP-binding domain signature. 143 154 - T 11-11-2016 IPR020845 AMP-binding, conserved site ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 Pfam PF00501 AMP-binding enzyme 28 379 7.4E-56 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 Gene3D G3DSA:2.30.38.10 317 370 2.5E-6 T 11-11-2016 ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 Gene3D G3DSA:3.30.300.30 378 478 7.5E-7 T 11-11-2016 ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 SUPERFAMILY SSF56801 26 493 6.67E-89 T 11-11-2016 ATY42_RS05770 cf7a0182683bd5a39e61e7c1c1056665 499 Gene3D G3DSA:3.40.50.980 19 148 1.4E-19 T 11-11-2016 ATY42_RS21840 f1392806280414e2048e40bb5b763b63 60 Gene3D G3DSA:1.10.1660.10 7 55 2.7E-10 T 11-11-2016 ATY42_RS21840 f1392806280414e2048e40bb5b763b63 60 SUPERFAMILY SSF46955 9 55 1.1E-8 T 11-11-2016 IPR009061 Putative DNA-binding domain ATY42_RS21840 f1392806280414e2048e40bb5b763b63 60 Pfam PF00376 MerR family regulatory protein 10 46 5.4E-8 T 11-11-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ATY42_RS07005 601a61491ad369db7d12ff4321926983 155 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 11 149 22.161 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ATY42_RS07005 601a61491ad369db7d12ff4321926983 155 Pfam PF03652 Holliday junction resolvase 12 146 7.2E-37 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ATY42_RS07005 601a61491ad369db7d12ff4321926983 155 Gene3D G3DSA:3.30.420.140 11 149 2.0E-40 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ATY42_RS07005 601a61491ad369db7d12ff4321926983 155 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 14 145 1.6E-30 T 11-11-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ATY42_RS07005 601a61491ad369db7d12ff4321926983 155 SMART SM00732 11 111 1.2E-28 T 11-11-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 ATY42_RS07005 601a61491ad369db7d12ff4321926983 155 SUPERFAMILY SSF53098 11 146 1.97E-32 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 Pfam PF00406 Adenylate kinase 5 163 2.3E-55 T 11-11-2016 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 PRINTS PR00094 Adenylate kinase signature 133 148 3.9E-35 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 PRINTS PR00094 Adenylate kinase signature 81 97 3.9E-35 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 PRINTS PR00094 Adenylate kinase signature 4 17 3.9E-35 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 PRINTS PR00094 Adenylate kinase signature 32 46 3.9E-35 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 PRINTS PR00094 Adenylate kinase signature 150 164 3.9E-35 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 Hamap MF_00235 Adenylate kinase [adk]. 1 186 46.927 T 11-11-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 Gene3D G3DSA:3.40.50.300 1 184 1.2E-63 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS04620 50d66bd191f82edc653a341943867763 187 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-11-2016 ATY42_RS04620 50d66bd191f82edc653a341943867763 187 SUPERFAMILY SSF52540 1 186 8.75E-40 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09660 8fcf67c2c141a699572771d51a1b8381 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 112 3.9E-28 T 11-11-2016 IPR006504 Transcriptional regulator Spx/MgsR ATY42_RS09660 8fcf67c2c141a699572771d51a1b8381 118 Gene3D G3DSA:3.40.30.10 1 114 1.3E-34 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS09660 8fcf67c2c141a699572771d51a1b8381 118 SUPERFAMILY SSF52833 1 114 2.71E-29 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS09660 8fcf67c2c141a699572771d51a1b8381 118 Pfam PF03960 ArsC family 18 112 4.3E-14 T 11-11-2016 IPR006660 Arsenate reductase-like ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 38 410 3.7E-120 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 Pfam PF01566 Natural resistance-associated macrophage protein 58 414 2.0E-130 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 326 345 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 354 371 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 117 143 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 170 191 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 145 164 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 386 405 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 PRINTS PR00447 Natural resistance-associated macrophage protein signature 222 245 1.4E-60 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10765 ce5b3c2163cc05322cde793756ee4c9e 444 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 29 442 39.592 T 11-11-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 Gene3D G3DSA:3.90.1380.10 2 79 1.5E-17 T 11-11-2016 IPR029144 Threonine synthase, N-terminal ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 SUPERFAMILY SSF53686 2 430 1.05E-122 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 93 369 7.9E-23 T 11-11-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 Gene3D G3DSA:3.40.50.1100 193 406 1.5E-64 T 11-11-2016 ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 93 107 - T 11-11-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 Pfam PF14821 Threonine synthase N terminus 2 75 7.5E-14 T 11-11-2016 IPR029144 Threonine synthase, N-terminal ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 Gene3D G3DSA:3.40.50.1100 102 192 1.7E-13 T 11-11-2016 ATY42_RS10985 11b21469f8266c26731f88eefcad133d 434 TIGRFAM TIGR00260 thrC: threonine synthase 64 398 9.2E-71 T 11-11-2016 IPR004450 Threonine synthase-like ATY42_RS21590 16150b774ddd9027ff2e41fab507e11c 228 Gene3D G3DSA:3.40.50.300 2 227 5.8E-69 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21590 16150b774ddd9027ff2e41fab507e11c 228 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS21590 16150b774ddd9027ff2e41fab507e11c 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 216 7.5E-84 T 11-11-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 ATY42_RS21590 16150b774ddd9027ff2e41fab507e11c 228 SUPERFAMILY SSF52540 3 225 6.02E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21590 16150b774ddd9027ff2e41fab507e11c 228 Pfam PF00005 ABC transporter 20 167 9.5E-31 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS21590 16150b774ddd9027ff2e41fab507e11c 228 SMART SM00382 29 216 6.4E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS14425 e2ffcf909214bcfc2b3049fff3fb21f2 239 Pfam PF03475 3-alpha domain 183 223 1.5E-10 T 11-11-2016 IPR005163 3-alpha domain ATY42_RS14425 e2ffcf909214bcfc2b3049fff3fb21f2 239 Pfam PF03473 MOSC domain 59 172 3.5E-27 T 11-11-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ATY42_RS14425 e2ffcf909214bcfc2b3049fff3fb21f2 239 Gene3D G3DSA:2.40.33.20 12 237 1.3E-91 T 11-11-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like ATY42_RS14425 e2ffcf909214bcfc2b3049fff3fb21f2 239 SUPERFAMILY SSF50800 12 237 2.04E-75 T 11-11-2016 IPR011037 Pyruvate kinase-like, insert domain ATY42_RS03695 012fe177b9d085610f11418dafed93ec 224 PIRSF PIRSF006755 3 221 2.0E-76 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ATY42_RS03695 012fe177b9d085610f11418dafed93ec 224 Gene3D G3DSA:3.40.50.300 4 221 2.1E-77 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03695 012fe177b9d085610f11418dafed93ec 224 SUPERFAMILY SSF52540 1 219 2.7E-61 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03695 012fe177b9d085610f11418dafed93ec 224 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 3 216 27.849 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ATY42_RS03695 012fe177b9d085610f11418dafed93ec 224 Pfam PF13500 AAA domain 5 213 9.6E-39 T 11-11-2016 ATY42_RS03695 012fe177b9d085610f11418dafed93ec 224 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 7 177 1.4E-48 T 11-11-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 SUPERFAMILY SSF53784 5 416 4.71E-104 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 Gene3D G3DSA:3.40.50.450 5 236 2.1E-52 T 11-11-2016 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 192 2.4E-9 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 8 27 2.4E-9 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 151 2.4E-9 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 256 278 2.4E-9 T 11-11-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 Pfam PF00365 Phosphofructokinase 9 321 1.5E-47 T 11-11-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 3 398 44.392 T 11-11-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 ATY42_RS04615 a42bf643a5c48427b6fb424bd09bb174 418 PIRSF PIRSF036483 2 417 4.4E-218 T 11-11-2016 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 ATY42_RS10960 92820ab4a07579ed733d2014dc34c6a6 120 Pfam PF03073 TspO/MBR family 3 119 4.9E-26 T 11-11-2016 IPR004307 TspO/MBR-related protein GO:0016021 ATY42_RS10960 92820ab4a07579ed733d2014dc34c6a6 120 PIRSF PIRSF005859 1 120 2.9E-29 T 11-11-2016 IPR004307 TspO/MBR-related protein GO:0016021 ATY42_RS21255 1c90fec6463df5631b95a059a614279e 435 SUPERFAMILY SSF103473 15 431 2.75E-63 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS21255 1c90fec6463df5631b95a059a614279e 435 Pfam PF07690 Major Facilitator Superfamily 28 368 1.2E-28 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS21255 1c90fec6463df5631b95a059a614279e 435 Gene3D G3DSA:1.20.1250.20 17 200 5.8E-32 T 11-11-2016 ATY42_RS21255 1c90fec6463df5631b95a059a614279e 435 Gene3D G3DSA:1.20.1250.20 253 431 5.4E-13 T 11-11-2016 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Pfam PF01103 Surface antigen 454 788 1.1E-91 T 11-11-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 31 788 2.2E-245 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Gene3D G3DSA:3.10.20.310 268 329 8.8E-4 T 11-11-2016 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 788 25.429 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 PIRSF PIRSF006076 2 788 1.1E-255 T 11-11-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Pfam PF07244 Surface antigen variable number repeat 99 178 1.7E-12 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Pfam PF07244 Surface antigen variable number repeat 353 426 4.5E-15 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Pfam PF07244 Surface antigen variable number repeat 182 269 1.7E-11 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Pfam PF07244 Surface antigen variable number repeat 33 97 1.4E-4 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 ATY42_RS09560 c97b872dc96d154052962bb76d8de004 788 Pfam PF07244 Surface antigen variable number repeat 272 350 1.3E-11 T 11-11-2016 IPR010827 Surface antigen variable number GO:0019867 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 SUPERFAMILY SSF47729 1 91 3.39E-30 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 29.005 T 11-11-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 SMART SM00411 1 91 1.3E-39 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.6E-42 T 11-11-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-11-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-28 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.3E-18 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.3E-18 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.3E-18 T 11-11-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 ATY42_RS10625 538b0bea2dd03d38ece722272a63475d 103 Gene3D G3DSA:4.10.520.10 1 91 1.6E-32 T 11-11-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 ATY42_RS20720 af16d514c206a194c692ffc88b9fce61 392 SUPERFAMILY SSF50952 25 366 1.96E-43 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ATY42_RS20720 af16d514c206a194c692ffc88b9fce61 392 Pfam PF07995 Glucose / Sorbosone dehydrogenase 48 372 1.2E-125 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 ATY42_RS20720 af16d514c206a194c692ffc88b9fce61 392 Gene3D G3DSA:2.120.10.30 15 387 1.2E-103 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS03160 1a918022918e767c358e487ba96feb37 285 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 31 226 1.1E-47 T 11-11-2016 IPR018713 Domain of unknown function DUF2236 ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 SUPERFAMILY SSF51445 30 348 4.56E-32 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 SUPERFAMILY SSF49590 494 566 2.22E-12 T 11-11-2016 IPR007117 Expansin, cellulose-binding-like domain ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 Gene3D G3DSA:2.60.40.760 496 568 5.5E-4 T 11-11-2016 IPR007117 Expansin, cellulose-binding-like domain ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 Gene3D G3DSA:3.20.20.80 30 354 4.6E-42 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 Gene3D G3DSA:2.40.40.10 426 490 1.7E-9 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 33 216 5.0E-13 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 ATY42_RS20275 fc1295707e8a7340cfd4118c3098bef6 590 SUPERFAMILY SSF50685 387 496 3.49E-18 T 11-11-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain ATY42_RS22100 34ce5ebad4e480a7d6b45af2981d3ff7 529 Gene3D G3DSA:3.40.50.300 281 483 8.4E-19 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22100 34ce5ebad4e480a7d6b45af2981d3ff7 529 Gene3D G3DSA:1.25.40.10 10 262 1.5E-15 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS22100 34ce5ebad4e480a7d6b45af2981d3ff7 529 SUPERFAMILY SSF52540 280 507 3.87E-42 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22100 34ce5ebad4e480a7d6b45af2981d3ff7 529 Pfam PF13469 Sulfotransferase family 283 471 1.1E-43 T 11-11-2016 ATY42_RS22100 34ce5ebad4e480a7d6b45af2981d3ff7 529 SUPERFAMILY SSF48452 114 179 4.27E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS22100 34ce5ebad4e480a7d6b45af2981d3ff7 529 SUPERFAMILY SSF48452 8 79 4.27E-12 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS16495 f9670a3654ca88b082e1b61a4f8c48f7 320 SMART SM01126 137 285 6.9E-46 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16495 f9670a3654ca88b082e1b61a4f8c48f7 320 Pfam PF12762 ISXO2-like transposase domain 138 285 1.8E-30 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16495 f9670a3654ca88b082e1b61a4f8c48f7 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 3.9E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 357 52.501 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 SMART SM01329 4 353 1.3E-206 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 352 1.1E-157 T 11-11-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 Gene3D G3DSA:3.40.718.10 2 357 2.4E-130 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 353 4.8E-136 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 11-11-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ATY42_RS04520 b10a2ec5c524731cdde9cf4fe2bbedfa 357 SUPERFAMILY SSF53659 1 357 5.28E-124 T 11-11-2016 ATY42_RS22915 4110fc62c6262535a33aa24e28e6c415 78 SUPERFAMILY SSF143800 2 77 4.32E-31 T 11-11-2016 ATY42_RS22915 4110fc62c6262535a33aa24e28e6c415 78 Pfam PF00830 Ribosomal L28 family 3 62 3.4E-27 T 11-11-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS22915 4110fc62c6262535a33aa24e28e6c415 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.613 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS22915 4110fc62c6262535a33aa24e28e6c415 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 2.1E-26 T 11-11-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS22915 4110fc62c6262535a33aa24e28e6c415 78 Gene3D G3DSA:2.30.170.40 2 78 1.4E-37 T 11-11-2016 ATY42_RS20465 c21afbee91c81a69b53afaa23bc392f5 117 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 95 2.6E-23 T 11-11-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 ATY42_RS20465 c21afbee91c81a69b53afaa23bc392f5 117 Pfam PF03334 Na+/H+ antiporter subunit 12 92 6.3E-24 T 11-11-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 ATY42_RS14060 bd2a272e7dc4ff7232df087f4068a892 138 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 67 121 3.3E-15 T 11-11-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 ATY42_RS13745 82df95b2f20b207b51ccc9fc76edd4a3 333 Pfam PF01544 CorA-like Mg2+ transporter protein 42 329 2.6E-60 T 11-11-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ATY42_RS13745 82df95b2f20b207b51ccc9fc76edd4a3 333 SUPERFAMILY SSF143865 7 265 9.81E-73 T 11-11-2016 ATY42_RS13745 82df95b2f20b207b51ccc9fc76edd4a3 333 Gene3D G3DSA:3.30.460.20 9 141 2.3E-38 T 11-11-2016 ATY42_RS13745 82df95b2f20b207b51ccc9fc76edd4a3 333 SUPERFAMILY SSF144083 269 330 2.88E-16 T 11-11-2016 ATY42_RS13745 82df95b2f20b207b51ccc9fc76edd4a3 333 Gene3D G3DSA:1.20.58.340 258 333 1.1E-20 T 11-11-2016 ATY42_RS13745 82df95b2f20b207b51ccc9fc76edd4a3 333 Gene3D G3DSA:1.20.58.340 142 254 1.7E-37 T 11-11-2016 ATY42_RS22350 1e4b403be13ed577109b3681795e286a 460 Pfam PF13546 DDE superfamily endonuclease 39 312 3.5E-91 T 11-11-2016 ATY42_RS22350 1e4b403be13ed577109b3681795e286a 460 SUPERFAMILY SSF53098 39 424 1.21E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06315 070a7a68aaa3ac2e68bf4e5326fec515 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 2 188 21.908 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ATY42_RS06315 070a7a68aaa3ac2e68bf4e5326fec515 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 186 6.0E-40 T 11-11-2016 IPR010664 Lipopolysaccharide assembly, LptC-related ATY42_RS06315 070a7a68aaa3ac2e68bf4e5326fec515 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 11 185 9.0E-47 T 11-11-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 ATY42_RS07180 6de076754d086ec3a7fcebe84426f24f 188 Pfam PF11745 Protein of unknown function (DUF3304) 30 140 2.6E-29 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS09725 28e1f7a4ed859d4593df225f33ffce1e 397 SUPERFAMILY SSF111369 165 267 6.67E-11 T 11-11-2016 ATY42_RS09725 28e1f7a4ed859d4593df225f33ffce1e 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 44 345 2.5E-10 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS09725 28e1f7a4ed859d4593df225f33ffce1e 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 289 1.1E-14 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS09725 28e1f7a4ed859d4593df225f33ffce1e 397 Gene3D G3DSA:2.40.50.100 59 93 1.9E-18 T 11-11-2016 ATY42_RS09725 28e1f7a4ed859d4593df225f33ffce1e 397 Gene3D G3DSA:2.40.50.100 214 247 1.9E-18 T 11-11-2016 ATY42_RS09725 28e1f7a4ed859d4593df225f33ffce1e 397 SUPERFAMILY SSF111369 59 113 9.02E-9 T 11-11-2016 ATY42_RS08520 991661e39f2e87dba6f3b77aff08b199 72 Pfam PF12762 ISXO2-like transposase domain 3 37 1.4E-8 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 Gene3D G3DSA:3.10.420.10 16 159 1.2E-53 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 24 41 2.1E-35 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 108 130 2.1E-35 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 84 104 2.1E-35 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 134 152 2.1E-35 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 19 153 8.4E-48 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 SUPERFAMILY SSF54611 20 151 4.36E-47 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 Pfam PF02556 Preprotein translocase subunit SecB 17 154 3.4E-53 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS21135 6f69caca8d7ec944696b622a1ffe6448 171 Hamap MF_00821 Protein-export protein SecB [secB]. 1 156 31.86 T 11-11-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 ATY42_RS08820 62d4797e8ab209f57590ac56138ed67e 299 Pfam PF01551 Peptidase family M23 174 274 1.4E-24 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS08820 62d4797e8ab209f57590ac56138ed67e 299 Gene3D G3DSA:2.70.70.10 139 274 3.8E-33 T 11-11-2016 ATY42_RS08820 62d4797e8ab209f57590ac56138ed67e 299 SUPERFAMILY SSF51261 152 274 2.51E-31 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS19645 b848a7abd2dab7273853887ae682f209 320 SMART SM01126 137 285 3.4E-45 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS19645 b848a7abd2dab7273853887ae682f209 320 Pfam PF12762 ISXO2-like transposase domain 138 285 1.5E-30 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS19645 b848a7abd2dab7273853887ae682f209 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 3.9E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS03450 38eb15483283735adcee65400abb477a 185 Pfam PF07301 Protein of unknown function (DUF1453) 14 128 1.1E-6 T 11-11-2016 IPR009916 Protein of unknown function DUF1453 ATY42_RS15655 67eca940bf6ab73ce4c32e5e125ee236 528 SUPERFAMILY SSF75005 38 352 1.86E-59 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS15655 67eca940bf6ab73ce4c32e5e125ee236 528 Gene3D G3DSA:2.115.10.20 35 335 5.2E-66 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS15655 67eca940bf6ab73ce4c32e5e125ee236 528 Pfam PF04616 Glycosyl hydrolases family 43 46 332 1.8E-39 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 ATY42_RS15655 67eca940bf6ab73ce4c32e5e125ee236 528 Gene3D G3DSA:2.60.120.260 376 506 9.6E-5 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS02265 3cb2f4dde653fc1d9c2b7d88bc35ea42 245 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 27 243 7.8E-97 T 11-11-2016 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 ATY42_RS02265 3cb2f4dde653fc1d9c2b7d88bc35ea42 245 Pfam PF00775 Dioxygenase 68 238 2.4E-54 T 11-11-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATY42_RS02265 3cb2f4dde653fc1d9c2b7d88bc35ea42 245 Gene3D G3DSA:2.60.130.10 27 244 1.9E-75 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATY42_RS02265 3cb2f4dde653fc1d9c2b7d88bc35ea42 245 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 89 117 - T 11-11-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 ATY42_RS02265 3cb2f4dde653fc1d9c2b7d88bc35ea42 245 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 19 53 3.4E-9 T 11-11-2016 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 ATY42_RS02265 3cb2f4dde653fc1d9c2b7d88bc35ea42 245 SUPERFAMILY SSF49482 25 244 3.14E-73 T 11-11-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 ATY42_RS01230 6a85772ee936799e18f6b0ee5fb23161 357 Gene3D G3DSA:3.20.20.80 43 351 6.7E-98 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS01230 6a85772ee936799e18f6b0ee5fb23161 357 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 167 176 - T 11-11-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 ATY42_RS01230 6a85772ee936799e18f6b0ee5fb23161 357 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 47 321 5.1E-53 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 ATY42_RS01230 6a85772ee936799e18f6b0ee5fb23161 357 SUPERFAMILY SSF51445 43 345 1.63E-80 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS20850 b82071199b1df87af3389a60b62acc45 291 SUPERFAMILY SSF81452 9 291 2.72E-83 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20850 b82071199b1df87af3389a60b62acc45 291 Gene3D G3DSA:1.10.287.70 8 74 7.1E-21 T 11-11-2016 ATY42_RS20850 b82071199b1df87af3389a60b62acc45 291 Gene3D G3DSA:1.20.120.80 77 290 3.2E-66 T 11-11-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20850 b82071199b1df87af3389a60b62acc45 291 Pfam PF00510 Cytochrome c oxidase subunit III 150 290 8.7E-45 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS20850 b82071199b1df87af3389a60b62acc45 291 Pfam PF00510 Cytochrome c oxidase subunit III 10 112 4.5E-16 T 11-11-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ATY42_RS04820 d91d6d44490f39f64e7c87fd38ae134d 309 Pfam PF01609 Transposase DDE domain 72 308 4.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04820 d91d6d44490f39f64e7c87fd38ae134d 309 SUPERFAMILY SSF53098 2 308 1.06E-25 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22795 fb059c384bf64eb9a50e8c3357831f66 336 Gene3D G3DSA:3.20.20.100 6 323 5.1E-53 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS22795 fb059c384bf64eb9a50e8c3357831f66 336 SUPERFAMILY SSF51430 8 325 2.75E-62 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS22795 fb059c384bf64eb9a50e8c3357831f66 336 Pfam PF00248 Aldo/keto reductase family 19 323 1.3E-43 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS07860 a02d17af641177d83c2bfb41ec0ae876 126 Pfam PF04134 Protein of unknown function, DUF393 22 106 9.2E-21 T 11-11-2016 IPR007263 Protein of unknown function DUF393 ATY42_RS06185 71efb787038be879cf7304ef4d22764f 348 SUPERFAMILY SSF51197 36 337 2.33E-56 T 11-11-2016 ATY42_RS06185 71efb787038be879cf7304ef4d22764f 348 Gene3D G3DSA:2.60.120.650 35 269 4.5E-43 T 11-11-2016 ATY42_RS06185 71efb787038be879cf7304ef4d22764f 348 SMART SM00558 124 286 7.6E-5 T 11-11-2016 IPR003347 JmjC domain ATY42_RS06185 71efb787038be879cf7304ef4d22764f 348 Pfam PF13621 Cupin-like domain 32 273 3.4E-57 T 11-11-2016 ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 Gene3D G3DSA:3.20.20.80 260 552 7.6E-82 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 Gene3D G3DSA:3.20.20.80 90 181 7.6E-82 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 SUPERFAMILY SSF51011 569 635 1.98E-6 T 11-11-2016 ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 SMART SM00642 95 535 9.4E-27 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 Gene3D G3DSA:2.60.40.1180 566 635 1.3E-10 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 SUPERFAMILY SSF51445 18 557 1.06E-96 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 Pfam PF00128 Alpha amylase, catalytic domain 103 318 1.3E-32 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS05305 6c073be158e8b5d5a62760d586db6308 638 Gene3D G3DSA:3.90.400.10 182 252 7.2E-21 T 11-11-2016 ATY42_RS08525 c10561df339fbd4d87425d8a2f210228 354 Pfam PF01112 Asparaginase 59 337 6.6E-79 T 11-11-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 ATY42_RS08525 c10561df339fbd4d87425d8a2f210228 354 SUPERFAMILY SSF56235 48 338 3.34E-86 T 11-11-2016 IPR029055 Nucleophile aminohydrolases, N-terminal ATY42_RS11875 009551f7590fe0dc34ed134fab0f999d 91 Gene3D G3DSA:3.30.70.360 9 88 5.4E-4 T 11-11-2016 IPR011650 Peptidase M20, dimerisation domain ATY42_RS11875 009551f7590fe0dc34ed134fab0f999d 91 Pfam PF09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) 4 90 2.6E-29 T 11-11-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein ATY42_RS11875 009551f7590fe0dc34ed134fab0f999d 91 TIGRFAM TIGR02610 PHA_gran_rgn: putative polyhydroxyalkanoic acid system protein 1 91 5.3E-44 T 11-11-2016 IPR013433 Putative polyhydroxyalkanoic acid system protein ATY42_RS10045 f1229fba9b83b93d52b4673ae875c251 78 Hamap MF_00715 Protein SlyX [slyX]. 11 78 15.601 T 11-11-2016 IPR007236 SlyX ATY42_RS10045 f1229fba9b83b93d52b4673ae875c251 78 Pfam PF04102 SlyX 12 78 7.0E-16 T 11-11-2016 IPR007236 SlyX ATY42_RS10045 f1229fba9b83b93d52b4673ae875c251 78 Gene3D G3DSA:1.20.5.300 1 58 1.4E-20 T 11-11-2016 ATY42_RS17820 d157f85ab95373d5a6c64babc35d1246 556 Pfam PF00884 Sulfatase 247 533 9.2E-48 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 ATY42_RS17820 d157f85ab95373d5a6c64babc35d1246 556 SUPERFAMILY SSF53649 244 502 5.45E-18 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ATY42_RS17820 d157f85ab95373d5a6c64babc35d1246 556 Gene3D G3DSA:3.40.720.10 393 535 8.9E-9 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ATY42_RS17820 d157f85ab95373d5a6c64babc35d1246 556 Pfam PF08019 Domain of unknown function (DUF1705) 68 216 1.3E-46 T 11-11-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 ATY42_RS18950 cf2cf413053e03ada7f6b6ec4a30d723 217 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 39 199 1.1E-18 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS18950 cf2cf413053e03ada7f6b6ec4a30d723 217 SUPERFAMILY SSF52266 37 215 2.9E-45 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS18950 cf2cf413053e03ada7f6b6ec4a30d723 217 Gene3D G3DSA:3.40.50.1110 37 215 1.6E-46 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 Pfam PF03466 LysR substrate binding domain 103 307 1.1E-30 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 SUPERFAMILY SSF53850 103 308 3.26E-30 T 11-11-2016 ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 SUPERFAMILY SSF46785 10 121 3.75E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 Gene3D G3DSA:1.10.10.10 12 94 5.5E-21 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 73 5.7E-16 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 1.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 1.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 1.5E-6 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 Gene3D G3DSA:3.40.190.10 195 272 1.9E-8 T 11-11-2016 ATY42_RS18790 53c1a1600ce1b770d18f9f3b209335e2 333 Gene3D G3DSA:3.40.190.10 103 194 1.7E-18 T 11-11-2016 ATY42_RS17595 a29cf26dca3d0aa7886e5e78c3413d50 159 Pfam PF11745 Protein of unknown function (DUF3304) 17 119 5.0E-25 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS17900 85addac2d0da0c94e749d64b77ef54fd 318 Pfam PF00665 Integrase core domain 175 267 2.4E-7 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS17900 85addac2d0da0c94e749d64b77ef54fd 318 SUPERFAMILY SSF53098 165 308 1.97E-19 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS17900 85addac2d0da0c94e749d64b77ef54fd 318 Pfam PF13936 Helix-turn-helix domain 3 45 8.5E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS17900 85addac2d0da0c94e749d64b77ef54fd 318 Gene3D G3DSA:3.30.420.10 165 307 1.1E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20135 7707f033208efd32db2970ef1117eceb 350 Pfam PF06580 Histidine kinase 159 237 1.0E-20 T 11-11-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ATY42_RS20135 7707f033208efd32db2970ef1117eceb 350 SUPERFAMILY SSF55874 217 297 2.47E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS20135 7707f033208efd32db2970ef1117eceb 350 Gene3D G3DSA:3.30.565.10 247 294 1.5E-4 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17530 a65220627cea6ab0431466dd993590d2 262 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 32 238 1.5E-62 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU ATY42_RS17530 a65220627cea6ab0431466dd993590d2 262 Pfam PF09850 Type VI secretion system protein DotU 33 231 5.9E-56 T 11-11-2016 IPR017732 Type IV / VI secretion system, DotU ATY42_RS11175 f237009826003b8cc33750462c2c6e6e 313 Pfam PF11726 Protein of unknown function (DUF3296) 143 201 1.8E-5 T 11-11-2016 IPR021723 Inovirus Gp2 ATY42_RS01635 9880417d723446ec95140a75302b0456 250 Pfam PF05598 Transposase domain (DUF772) 87 160 3.3E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS11410 e49b1338feb7738a23766065f63f49ca 413 Pfam PF02687 FtsX-like permease family 274 406 9.6E-16 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ATY42_RS11410 e49b1338feb7738a23766065f63f49ca 413 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.8E-140 T 11-11-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 ATY42_RS11410 e49b1338feb7738a23766065f63f49ca 413 Pfam PF12704 MacB-like periplasmic core domain 27 232 1.1E-17 T 11-11-2016 IPR025857 MacB-like periplasmic core domain ATY42_RS06595 6031294a5f471da22c93e030b67ca68b 625 Gene3D G3DSA:2.170.130.10 25 159 6.4E-42 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06595 6031294a5f471da22c93e030b67ca68b 625 SUPERFAMILY SSF56935 34 621 9.16E-118 T 11-11-2016 ATY42_RS06595 6031294a5f471da22c93e030b67ca68b 625 Gene3D G3DSA:2.40.170.20 160 621 2.2E-83 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06595 6031294a5f471da22c93e030b67ca68b 625 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 153 3.1E-29 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS06595 6031294a5f471da22c93e030b67ca68b 625 Pfam PF00593 TonB dependent receptor 395 622 4.6E-36 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06595 6031294a5f471da22c93e030b67ca68b 625 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 1 622 4.2E-279 T 11-11-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 ATY42_RS16430 7b61a6697bc7db438524a433a7ed9aa3 391 Pfam PF01694 Rhomboid family 51 202 4.9E-26 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS16430 7b61a6697bc7db438524a433a7ed9aa3 391 Gene3D G3DSA:1.20.1540.10 36 200 3.9E-29 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS16430 7b61a6697bc7db438524a433a7ed9aa3 391 SUPERFAMILY SSF144091 46 207 6.28E-30 T 11-11-2016 ATY42_RS20115 58427d5bc8ac7927fde35757f9165511 321 Pfam PF13280 WYL domain 144 313 2.2E-38 T 11-11-2016 IPR026881 WYL domain ATY42_RS20115 58427d5bc8ac7927fde35757f9165511 321 SUPERFAMILY SSF46785 2 47 2.18E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20115 58427d5bc8ac7927fde35757f9165511 321 Pfam PF08279 HTH domain 6 61 3.3E-12 T 11-11-2016 IPR013196 Helix-turn-helix, type 11 ATY42_RS20115 58427d5bc8ac7927fde35757f9165511 321 Gene3D G3DSA:1.10.10.10 1 63 5.7E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS20600 d52ade598dcc04ec84d2f50edd878350 250 Gene3D G3DSA:1.10.150.240 27 96 7.9E-31 T 11-11-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 ATY42_RS20600 d52ade598dcc04ec84d2f50edd878350 250 Pfam PF13419 Haloacid dehalogenase-like hydrolase 71 193 1.0E-5 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS20600 d52ade598dcc04ec84d2f50edd878350 250 Gene3D G3DSA:3.40.50.1000 97 242 4.1E-43 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS20600 d52ade598dcc04ec84d2f50edd878350 250 SUPERFAMILY SSF56784 11 230 2.3E-24 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03965 0be1e941df481ba9e2286a16321ce255 391 Pfam PF13546 DDE superfamily endonuclease 1 243 6.2E-79 T 11-11-2016 ATY42_RS03965 0be1e941df481ba9e2286a16321ce255 391 SUPERFAMILY SSF53098 11 355 2.05E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS08505 15c0af6f9670cebece40d29c57ec6db2 86 Pfam PF12034 Domain of unknown function (DUF3520) 4 76 7.9E-13 T 11-11-2016 IPR021908 Protein of unknown function DUF3520 ATY42_RS11575 fce21dfc9c1cd42a1aa55f781e74768b 242 Gene3D G3DSA:1.10.10.10 31 78 4.7E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS11575 fce21dfc9c1cd42a1aa55f781e74768b 242 Pfam PF13518 Helix-turn-helix domain 33 86 5.4E-15 T 11-11-2016 ATY42_RS11575 fce21dfc9c1cd42a1aa55f781e74768b 242 SUPERFAMILY SSF46689 32 132 1.0E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS22570 63faebe72a6bfa8752b42df6aebc26f2 203 Gene3D G3DSA:3.90.280.10 1 202 2.7E-62 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein ATY42_RS22570 63faebe72a6bfa8752b42df6aebc26f2 203 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 28 195 4.8E-25 T 11-11-2016 IPR005247 YbhB/YbcL ATY42_RS22570 63faebe72a6bfa8752b42df6aebc26f2 203 Pfam PF01161 Phosphatidylethanolamine-binding protein 26 196 2.2E-37 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein ATY42_RS22570 63faebe72a6bfa8752b42df6aebc26f2 203 SUPERFAMILY SSF49777 1 198 3.92E-41 T 11-11-2016 IPR008914 Phosphatidylethanolamine-binding protein ATY42_RS14755 1465f1a0ad222539afb843ce3d366447 124 SUPERFAMILY SSF64076 1 123 3.92E-31 T 11-11-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ATY42_RS14755 1465f1a0ad222539afb843ce3d366447 124 Gene3D G3DSA:3.40.1230.10 1 123 1.5E-34 T 11-11-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ATY42_RS14755 1465f1a0ad222539afb843ce3d366447 124 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 20 120 1.7E-23 T 11-11-2016 IPR007523 NDUFAF3/Mth938 domain-containing protein ATY42_RS22595 d36dd8e78d8b659ba60529881cd266d9 142 Gene3D G3DSA:3.10.129.10 3 139 5.2E-47 T 11-11-2016 IPR029069 HotDog domain ATY42_RS22595 d36dd8e78d8b659ba60529881cd266d9 142 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 1.6E-38 T 11-11-2016 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-75105 ATY42_RS22595 d36dd8e78d8b659ba60529881cd266d9 142 Pfam PF03061 Thioesterase superfamily 50 127 3.3E-14 T 11-11-2016 IPR006683 Thioesterase domain Reactome: R-HSA-75105 ATY42_RS22595 d36dd8e78d8b659ba60529881cd266d9 142 SUPERFAMILY SSF54637 13 139 1.28E-29 T 11-11-2016 IPR029069 HotDog domain ATY42_RS04585 252a3b0088b74d0e90d63d01ac573223 178 Pfam PF00719 Inorganic pyrophosphatase 18 174 3.9E-52 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 ATY42_RS04585 252a3b0088b74d0e90d63d01ac573223 178 Gene3D G3DSA:3.90.80.10 7 174 4.4E-61 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 ATY42_RS04585 252a3b0088b74d0e90d63d01ac573223 178 SUPERFAMILY SSF50324 7 174 1.18E-66 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 ATY42_RS04585 252a3b0088b74d0e90d63d01ac573223 178 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.333 T 11-11-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1 ATY42_RS06470 fd439618f29ee75290ab99a836ae710c 349 SUPERFAMILY SSF74650 3 331 3.83E-94 T 11-11-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 ATY42_RS06470 fd439618f29ee75290ab99a836ae710c 349 PIRSF PIRSF005096 1 334 3.5E-96 T 11-11-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 ATY42_RS06470 fd439618f29ee75290ab99a836ae710c 349 Pfam PF01263 Aldose 1-epimerase 16 330 1.9E-75 T 11-11-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ATY42_RS06470 fd439618f29ee75290ab99a836ae710c 349 Gene3D G3DSA:2.70.98.10 2 331 1.3E-101 T 11-11-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0003824|GO:0005975|GO:0030246 ATY42_RS17755 d9eceb7a63494952eea0e329261a2693 128 Pfam PF04241 Protein of unknown function (DUF423) 33 111 2.5E-8 T 11-11-2016 IPR006696 Protein of unknown function DUF423 ATY42_RS17745 d9eceb7a63494952eea0e329261a2693 128 Pfam PF04241 Protein of unknown function (DUF423) 33 111 2.5E-8 T 11-11-2016 IPR006696 Protein of unknown function DUF423 ATY42_RS03410 bb93129932bfe5159f41d961ce9fba4c 287 Gene3D G3DSA:3.40.50.1820 21 277 1.4E-14 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS03410 bb93129932bfe5159f41d961ce9fba4c 287 SUPERFAMILY SSF53474 23 279 9.53E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02110 c26de2ebb045392a679fcd26b2338ed8 299 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 23 296 2.3E-107 T 11-11-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 ATY42_RS02110 c26de2ebb045392a679fcd26b2338ed8 299 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 16 299 29.019 T 11-11-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 ATY42_RS02110 c26de2ebb045392a679fcd26b2338ed8 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 78 100 - T 11-11-2016 IPR030470 UbiA prenyltransferase conserved site ATY42_RS02110 c26de2ebb045392a679fcd26b2338ed8 299 Pfam PF01040 UbiA prenyltransferase family 39 283 2.0E-60 T 11-11-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 ATY42_RS00365 404fa94816685d49fa58a1b2d252abfe 574 SUPERFAMILY SSF56112 106 170 3.25E-21 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS00365 404fa94816685d49fa58a1b2d252abfe 574 SUPERFAMILY SSF56112 205 332 3.25E-21 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS00365 404fa94816685d49fa58a1b2d252abfe 574 Pfam PF03109 ABC1 family 124 242 3.3E-29 T 11-11-2016 IPR004147 UbiB domain ATY42_RS01535 a08c383310b4d3a65c7bc0a80c002a16 194 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 189 24.454 T 11-11-2016 IPR022929 Putative manganese efflux pump MntP ATY42_RS01535 a08c383310b4d3a65c7bc0a80c002a16 194 Pfam PF02659 Putative manganese efflux pump 31 186 4.2E-49 T 11-11-2016 IPR003810 Putative manganese efflux pump ATY42_RS23100 8d2db6f100f5d694e23ab0acafadce1b 393 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 16 191 1.4E-44 T 11-11-2016 IPR024537 Domain of unknown function DUF3322 ATY42_RS23100 8d2db6f100f5d694e23ab0acafadce1b 393 PIRSF PIRSF028408 4 393 7.2E-69 T 11-11-2016 IPR014544 Uncharacterised conserved protein UCP028408 ATY42_RS23100 8d2db6f100f5d694e23ab0acafadce1b 393 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 208 385 1.8E-50 T 11-11-2016 IPR024534 Domain of unknown function DUF2220 ATY42_RS17485 7fe284cb4bcee3dce9cb73e14ef7ba43 363 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 19 343 5.2E-91 T 11-11-2016 IPR010732 Type VI secretion, TssG-like ATY42_RS17485 7fe284cb4bcee3dce9cb73e14ef7ba43 363 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 19 344 1.3E-107 T 11-11-2016 IPR010732 Type VI secretion, TssG-like ATY42_RS13130 6387ee2ae435767e39a38eb612fc2785 380 Pfam PF13546 DDE superfamily endonuclease 11 284 8.4E-90 T 11-11-2016 ATY42_RS13130 6387ee2ae435767e39a38eb612fc2785 380 SUPERFAMILY SSF53098 8 378 7.59E-26 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21945 f08544dc34777f73ec932899372b0728 403 Pfam PF13546 DDE superfamily endonuclease 1 255 4.4E-86 T 11-11-2016 ATY42_RS21945 f08544dc34777f73ec932899372b0728 403 SUPERFAMILY SSF53098 20 367 2.65E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09430 6532e2577bb657de36270420bb526ab9 486 Pfam PF05598 Transposase domain (DUF772) 87 160 6.0E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS09430 6532e2577bb657de36270420bb526ab9 486 Pfam PF01609 Transposase DDE domain 312 449 5.0E-10 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 Gene3D G3DSA:1.10.287.110 46 109 1.4E-17 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 Pfam PF00226 DnaJ domain 46 109 2.5E-13 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 PRINTS PR00625 DnaJ domain signature 88 108 3.4E-10 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 PRINTS PR00625 DnaJ domain signature 66 81 3.4E-10 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 PRINTS PR00625 DnaJ domain signature 48 66 3.4E-10 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 SUPERFAMILY SSF46565 14 109 2.62E-21 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS20395 7b6e9b4ef721533792cc090dd67684bf 109 SMART SM00271 45 108 2.7E-15 T 11-11-2016 IPR001623 DnaJ domain ATY42_RS14185 58cb67c8148a3f8cdaab1755d010cceb 253 Pfam PF13557 Putative MetA-pathway of phenol degradation 27 253 7.8E-19 T 11-11-2016 IPR025737 MetA-pathway of phenol degradation, putative ATY42_RS20935 437e756c12da2da7af9df9362ba133f3 104 SUPERFAMILY SSF103481 4 102 3.53E-19 T 11-11-2016 ATY42_RS20935 437e756c12da2da7af9df9362ba133f3 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.9E-28 T 11-11-2016 IPR000390 Small multidrug resistance protein family GO:0016021 ATY42_RS14300 5bd0162e362ac340b340b0fe6e3d355f 136 Pfam PF01850 PIN domain 3 121 2.6E-8 T 11-11-2016 IPR002716 PIN domain ATY42_RS14300 5bd0162e362ac340b340b0fe6e3d355f 136 Gene3D G3DSA:3.40.50.1010 1 132 5.5E-6 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS14300 5bd0162e362ac340b340b0fe6e3d355f 136 SUPERFAMILY SSF88723 1 122 2.78E-13 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS05180 f9d572a74ef694ebaab8e22c748af161 622 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 51 211 1.3E-14 T 11-11-2016 ATY42_RS09285 004940422e5e658883a80f30376ed3ef 138 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 2.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS02225 14bee6abb2c0170c10274c0d81984530 347 SUPERFAMILY SSF47240 22 347 1.88E-85 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS02225 14bee6abb2c0170c10274c0d81984530 347 Gene3D G3DSA:1.10.620.20 14 316 3.1E-80 T 11-11-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: R-HSA-499943 ATY42_RS02225 14bee6abb2c0170c10274c0d81984530 347 PIRSF PIRSF000355 3 347 2.4E-112 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS02225 14bee6abb2c0170c10274c0d81984530 347 Pfam PF00268 Ribonucleotide reductase, small chain 32 305 4.4E-66 T 11-11-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ATY42_RS07675 60c19f39fae1d26770634f276ec0818a 278 Pfam PF06629 MltA-interacting protein MipA 52 277 1.2E-26 T 11-11-2016 IPR010583 MltA-interacting MipA ATY42_RS02190 1bf47f03ae83c63937e7611b9c6ba634 394 Pfam PF13546 DDE superfamily endonuclease 1 246 1.4E-80 T 11-11-2016 ATY42_RS02190 1bf47f03ae83c63937e7611b9c6ba634 394 SUPERFAMILY SSF53098 14 358 4.55E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21215 6f9b58f8801d200a8ccddbca3463d6f6 300 PRINTS PR00412 Epoxide hydrolase signature 110 123 7.0E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ATY42_RS21215 6f9b58f8801d200a8ccddbca3463d6f6 300 PRINTS PR00412 Epoxide hydrolase signature 272 294 7.0E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ATY42_RS21215 6f9b58f8801d200a8ccddbca3463d6f6 300 PRINTS PR00412 Epoxide hydrolase signature 38 56 7.0E-5 T 11-11-2016 IPR000639 Epoxide hydrolase-like GO:0003824 ATY42_RS21215 6f9b58f8801d200a8ccddbca3463d6f6 300 SUPERFAMILY SSF53474 4 298 3.37E-61 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21215 6f9b58f8801d200a8ccddbca3463d6f6 300 Gene3D G3DSA:3.40.50.1820 6 298 1.8E-67 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21215 6f9b58f8801d200a8ccddbca3463d6f6 300 Pfam PF00561 alpha/beta hydrolase fold 33 282 8.4E-23 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS01740 6d2d732389db658ac68c591d18843aad 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 5.7E-22 T 11-11-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 PIRSF PIRSF002936 2 302 4.3E-147 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 257 2.2E-58 T 11-11-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.4E-148 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 Gene3D G3DSA:3.40.50.620 7 210 2.3E-58 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 Gene3D G3DSA:3.40.50.620 244 253 2.3E-58 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 SUPERFAMILY SSF52402 6 210 1.52E-69 T 11-11-2016 ATY42_RS17010 f96a393d6b3c6d42357d103e750d038f 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 54.933 T 11-11-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ATY42_RS18520 30556790a1e515323fad4bb727350656 248 Pfam PF02674 Colicin V production protein 2 140 1.7E-29 T 11-11-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ATY42_RS06760 d84d196fbd6d101f1665d33549c9cf47 491 Pfam PF05598 Transposase domain (DUF772) 75 149 3.5E-13 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS06010 da62c62df2a49c1d9aebbe9c3579775f 289 Pfam PF13936 Helix-turn-helix domain 7 49 8.0E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS06010 da62c62df2a49c1d9aebbe9c3579775f 289 Pfam PF00665 Integrase core domain 176 268 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS06010 da62c62df2a49c1d9aebbe9c3579775f 289 SUPERFAMILY SSF53098 169 268 1.31E-12 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06010 da62c62df2a49c1d9aebbe9c3579775f 289 Gene3D G3DSA:3.30.420.10 169 266 6.6E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20830 2f218da0343bfeaedd7a397e76762385 387 Pfam PF02628 Cytochrome oxidase assembly protein 136 377 8.6E-45 T 11-11-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 ATY42_RS20830 2f218da0343bfeaedd7a397e76762385 387 Pfam PF02628 Cytochrome oxidase assembly protein 15 134 1.5E-19 T 11-11-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 ATY42_RS05855 5f767bd46696f9937b093b8f06357670 195 Pfam PF03922 OmpW family 131 195 9.7E-6 T 11-11-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 ATY42_RS05855 5f767bd46696f9937b093b8f06357670 195 Gene3D G3DSA:2.40.160.20 119 195 3.0E-12 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS05855 5f767bd46696f9937b093b8f06357670 195 SUPERFAMILY SSF56925 128 195 4.19E-6 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS22740 9d2c7adc7305a90b7ce91c99cd46287d 323 SUPERFAMILY SSF51430 5 316 1.83E-91 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS22740 9d2c7adc7305a90b7ce91c99cd46287d 323 Gene3D G3DSA:3.20.20.100 5 316 3.0E-92 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS22740 9d2c7adc7305a90b7ce91c99cd46287d 323 Pfam PF00248 Aldo/keto reductase family 16 314 2.4E-67 T 11-11-2016 IPR023210 NADP-dependent oxidoreductase domain ATY42_RS15915 e9430745454a41a582b468e3d457b092 264 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 80 246 3.3E-32 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS15915 e9430745454a41a582b468e3d457b092 264 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 81 245 1.1E-51 T 11-11-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 185 2.2E-29 T 11-11-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 Gene3D G3DSA:1.10.1740.10 8 118 7.5E-26 T 11-11-2016 ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 SUPERFAMILY SSF88659 114 186 1.31E-12 T 11-11-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 Pfam PF08281 Sigma-70, region 4 128 181 1.4E-11 T 11-11-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 Gene3D G3DSA:1.10.10.10 123 186 2.3E-15 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 Pfam PF04542 Sigma-70 region 2 30 97 3.1E-16 T 11-11-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS09345 9996ebbd6ad69a2b101a59b283c1f89d 187 SUPERFAMILY SSF88946 7 106 2.9E-25 T 11-11-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ATY42_RS13625 6dc1527821685aaef22c79dc5e772eb6 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 42 2.5E-11 T 11-11-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 ATY42_RS13625 6dc1527821685aaef22c79dc5e772eb6 92 SUPERFAMILY SSF47598 3 44 4.08E-13 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 ATY42_RS21645 bee0ee81fed9388e5d9f39118168fe23 145 Gene3D G3DSA:3.10.129.10 89 140 5.1E-4 T 11-11-2016 IPR029069 HotDog domain ATY42_RS21645 bee0ee81fed9388e5d9f39118168fe23 145 SUPERFAMILY SSF54637 3 139 3.91E-15 T 11-11-2016 IPR029069 HotDog domain ATY42_RS11405 02e6c5ff96ed3d5821d0f9a57a10986a 244 Gene3D G3DSA:3.40.50.300 18 240 1.8E-62 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11405 02e6c5ff96ed3d5821d0f9a57a10986a 244 Pfam PF00005 ABC transporter 39 186 1.1E-29 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS11405 02e6c5ff96ed3d5821d0f9a57a10986a 244 SUPERFAMILY SSF52540 18 240 4.15E-65 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11405 02e6c5ff96ed3d5821d0f9a57a10986a 244 SMART SM00382 47 235 2.3E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS11405 02e6c5ff96ed3d5821d0f9a57a10986a 244 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 18 237 1.9E-102 T 11-11-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 ATY42_RS01220 315419a26b247c95d21dc224691b39c0 197 SUPERFAMILY SSF53098 26 161 1.06E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01220 315419a26b247c95d21dc224691b39c0 197 Pfam PF01609 Transposase DDE domain 84 147 1.8E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS16785 315419a26b247c95d21dc224691b39c0 197 SUPERFAMILY SSF53098 26 161 1.06E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16785 315419a26b247c95d21dc224691b39c0 197 Pfam PF01609 Transposase DDE domain 84 147 1.8E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20280 05fc7939cb99d712c6cedebe66d22154 291 SUPERFAMILY SSF103481 188 277 1.31E-12 T 11-11-2016 ATY42_RS20280 05fc7939cb99d712c6cedebe66d22154 291 Pfam PF00892 EamA-like transporter family 3 136 2.1E-13 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS20280 05fc7939cb99d712c6cedebe66d22154 291 Pfam PF00892 EamA-like transporter family 146 274 2.0E-7 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS20280 05fc7939cb99d712c6cedebe66d22154 291 SUPERFAMILY SSF103481 35 141 1.28E-15 T 11-11-2016 ATY42_RS05830 817faef4db62bad938afdc81b0faa952 276 SMART SM00849 14 205 9.9E-25 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS05830 817faef4db62bad938afdc81b0faa952 276 SUPERFAMILY SSF56281 10 249 2.1E-49 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS05830 817faef4db62bad938afdc81b0faa952 276 Pfam PF00753 Metallo-beta-lactamase superfamily 13 205 4.4E-20 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS05830 817faef4db62bad938afdc81b0faa952 276 Gene3D G3DSA:3.60.15.10 7 248 2.7E-51 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS10405 1af30d34a2a6eb42e8d06394f495e8ab 476 PIRSF PIRSF006060 10 476 3.1E-94 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS10405 1af30d34a2a6eb42e8d06394f495e8ab 476 Pfam PF13520 Amino acid permease 27 441 1.4E-60 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS04735 2b10a40701a8abff5f3e2d548588454f 183 Pfam PF13683 Integrase core domain 100 166 2.1E-28 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS04735 2b10a40701a8abff5f3e2d548588454f 183 SUPERFAMILY SSF53098 10 170 1.9E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04735 2b10a40701a8abff5f3e2d548588454f 183 Gene3D G3DSA:3.30.420.10 11 167 1.3E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15550 ac9dec73a4a59d9f507db7380b460fb3 129 PRINTS PR00419 Adrenodoxin reductase family signature 60 82 1.6E-5 T 11-11-2016 ATY42_RS15550 ac9dec73a4a59d9f507db7380b460fb3 129 PRINTS PR00419 Adrenodoxin reductase family signature 83 96 1.6E-5 T 11-11-2016 ATY42_RS15550 ac9dec73a4a59d9f507db7380b460fb3 129 Gene3D G3DSA:3.50.50.60 61 103 5.0E-10 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS15550 ac9dec73a4a59d9f507db7380b460fb3 129 SUPERFAMILY SSF51905 57 106 1.31E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS13715 90a4f467ad13ab95aa66c808a2c00b3e 328 SUPERFAMILY SSF52540 117 290 1.83E-36 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS13715 90a4f467ad13ab95aa66c808a2c00b3e 328 Pfam PF02562 PhoH-like protein 112 315 2.2E-92 T 11-11-2016 IPR003714 PhoH-like protein GO:0005524 ATY42_RS13715 90a4f467ad13ab95aa66c808a2c00b3e 328 Gene3D G3DSA:3.40.50.300 112 315 7.6E-85 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18915 58b46da5e6ad5bd621277cbe1c39416a 296 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 36 158 1.0E-35 T 11-11-2016 IPR007621 TPM domain ATY42_RS04100 ae99e2f5143b32a4b0033d4e9aae70ef 211 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS21795 9884be27010c56099c970f871716886f 135 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 128 9.6E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21795 9884be27010c56099c970f871716886f 135 Gene3D G3DSA:3.30.565.10 2 129 1.4E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21795 9884be27010c56099c970f871716886f 135 PRINTS PR00344 Bacterial sensor protein C-terminal signature 71 85 3.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS21795 9884be27010c56099c970f871716886f 135 PRINTS PR00344 Bacterial sensor protein C-terminal signature 89 99 3.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS21795 9884be27010c56099c970f871716886f 135 PRINTS PR00344 Bacterial sensor protein C-terminal signature 106 124 3.1E-10 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS21795 9884be27010c56099c970f871716886f 135 SMART SM00387 34 132 5.1E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS21795 9884be27010c56099c970f871716886f 135 SUPERFAMILY SSF55874 3 129 1.27E-28 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS20250 96e11d81983cf7a26561abbe02b45f5d 94 Pfam PF01987 Mitochondrial biogenesis AIM24 6 83 2.2E-7 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 ATY42_RS20250 96e11d81983cf7a26561abbe02b45f5d 94 Gene3D G3DSA:3.60.160.10 6 91 1.1E-8 T 11-11-2016 IPR002838 Mitochondrial biogenesis protein AIM24 ATY42_RS20250 96e11d81983cf7a26561abbe02b45f5d 94 SUPERFAMILY SSF51219 5 90 4.19E-15 T 11-11-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain ATY42_RS19135 7b8c52f1d6a0391c3a7f75208682e5ad 181 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 4 181 1.8E-55 T 11-11-2016 IPR018636 Protein of unknown function DUF2058 ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 17 142 2.7E-28 T 11-11-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 17 42 1.2E-10 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 PRINTS PR00813 Bacterial general secretion pathway protein G signature 53 71 1.2E-10 T 11-11-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 Pfam PF08334 Type II secretion system (T2SS), protein G 40 142 1.4E-28 T 11-11-2016 IPR013545 Type II secretion system protein G ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 SUPERFAMILY SSF54523 45 141 6.28E-24 T 11-11-2016 ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 16 36 - T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS04085 ac51dadaa41e8950b72b1c5d04ff126f 143 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 15 37 6.2E-4 T 11-11-2016 IPR012902 Prokaryotic N-terminal methylation site ATY42_RS23180 7940e8866f80f6b70e493809bf2be66d 452 Pfam PF01609 Transposase DDE domain 282 416 5.4E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS23180 7940e8866f80f6b70e493809bf2be66d 452 Pfam PF05598 Transposase domain (DUF772) 59 132 2.8E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS09315 9507a6284a73b13693460e61c937127d 181 Pfam PF11086 Protein of unknown function (DUF2878) 4 158 1.2E-39 T 11-11-2016 IPR021306 Protein of unknown function DUF2878 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 Gene3D G3DSA:2.40.170.20 300 916 5.4E-69 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 Gene3D G3DSA:2.40.170.20 167 235 5.4E-69 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 SUPERFAMILY SSF56935 648 692 5.33E-90 T 11-11-2016 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 SUPERFAMILY SSF56935 21 223 5.33E-90 T 11-11-2016 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 SUPERFAMILY SSF56935 301 606 5.33E-90 T 11-11-2016 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 SUPERFAMILY SSF56935 737 916 5.33E-90 T 11-11-2016 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 Pfam PF00593 TonB dependent receptor 577 915 1.3E-25 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 163 1.2E-21 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS22095 411101f27f9e8f02f4f568aa3d8d1e2d 919 Gene3D G3DSA:2.170.130.10 23 166 1.6E-32 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS04420 18948dd346f6446cf18eaea2beca96fa 169 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.6E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 Pfam PF03971 Monomeric isocitrate dehydrogenase 6 738 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 SUPERFAMILY SSF53659 4 741 0.0 T 11-11-2016 ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 Gene3D G3DSA:3.40.718.10 340 363 6.8E-35 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 Gene3D G3DSA:3.40.718.10 539 645 6.8E-35 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 Gene3D G3DSA:3.40.718.10 147 285 6.8E-35 T 11-11-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 PIRSF PIRSF009407 1 742 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ATY42_RS21000 68346d582e33f3d9e7c273e8dc33e817 743 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 4 742 0.0 T 11-11-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 515 7.4E-118 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 155 176 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 359 378 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 50 66 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 434 451 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 131 155 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 31 50 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PRINTS PR01806 Virulence factor MviN signature 261 287 1.2E-69 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 Pfam PF03023 MviN-like protein 27 496 1.8E-120 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS07990 756af2ac8d2f26964df8b71285ac868e 534 PIRSF PIRSF002869 1 533 1.4E-138 T 11-11-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ ATY42_RS16845 e4a88e0ceb00bd498ff0693aab972b0a 87 SUPERFAMILY SSF46689 2 66 2.06E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS16845 e4a88e0ceb00bd498ff0693aab972b0a 87 Pfam PF01527 Transposase 2 70 2.1E-20 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS16845 e4a88e0ceb00bd498ff0693aab972b0a 87 Gene3D G3DSA:1.10.10.60 8 83 1.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02245 e4a88e0ceb00bd498ff0693aab972b0a 87 SUPERFAMILY SSF46689 2 66 2.06E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02245 e4a88e0ceb00bd498ff0693aab972b0a 87 Pfam PF01527 Transposase 2 70 2.1E-20 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS02245 e4a88e0ceb00bd498ff0693aab972b0a 87 Gene3D G3DSA:1.10.10.60 8 83 1.3E-8 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02165 ad097134dedc6262a9a63fb262a6ece0 86 Hamap MF_01866 Protein YcgL [ycgL]. 1 86 20.161 T 11-11-2016 IPR027354 YcgL domain ATY42_RS02165 ad097134dedc6262a9a63fb262a6ece0 86 Pfam PF05166 YcgL domain 4 75 1.6E-24 T 11-11-2016 IPR027354 YcgL domain ATY42_RS02165 ad097134dedc6262a9a63fb262a6ece0 86 SUPERFAMILY SSF160191 1 77 2.48E-23 T 11-11-2016 ATY42_RS02165 ad097134dedc6262a9a63fb262a6ece0 86 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 5 75 9.0E-35 T 11-11-2016 IPR027354 YcgL domain ATY42_RS11315 3755f4056e50973642d07097f1d876cf 331 Pfam PF00872 Transposase, Mutator family 2 305 2.5E-95 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS11315 3755f4056e50973642d07097f1d876cf 331 ProSitePatterns PS01007 Transposases, Mutator family, signature. 160 184 - T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS05800 980fad52aec540e401d557236a9804bf 121 PIRSF PIRSF019455 1 121 8.0E-39 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ATY42_RS05800 980fad52aec540e401d557236a9804bf 121 Gene3D G3DSA:1.10.10.10 1 76 1.8E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05800 980fad52aec540e401d557236a9804bf 121 SUPERFAMILY SSF46785 1 118 7.27E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05800 980fad52aec540e401d557236a9804bf 121 Pfam PF03965 Penicillinase repressor 3 115 6.6E-35 T 11-11-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 SUPERFAMILY SSF75553 485 668 1.83E-9 T 11-11-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1157 0.0 T 11-11-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1150 2.9E-67 T 11-11-2016 IPR003395 RecF/RecN/SMC, N-terminal ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 SUPERFAMILY SSF52540 1 213 1.08E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 SUPERFAMILY SSF52540 1043 1159 1.08E-51 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 SMART SM00968 521 619 6.8E-5 T 11-11-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 Gene3D G3DSA:1.20.1170.10 659 838 4.8E-4 T 11-11-2016 ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 Gene3D G3DSA:3.40.50.300 1024 1161 4.2E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 Gene3D G3DSA:3.40.50.300 1 166 4.2E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 PIRSF PIRSF005719 1 1165 1.3E-265 T 11-11-2016 IPR024704 Structural maintenance of chromosomes protein ATY42_RS11980 83435e8ccb86024a8e56942fb5ef6055 1167 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1159 23.191 T 11-11-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ATY42_RS00280 ff80348fc3fff71c615fd765b0b71105 271 Pfam PF05593 RHS Repeat 106 134 1.9E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS00280 ff80348fc3fff71c615fd765b0b71105 271 Pfam PF05593 RHS Repeat 215 245 3.2E-5 T 11-11-2016 IPR031325 RHS repeat ATY42_RS00280 ff80348fc3fff71c615fd765b0b71105 271 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 106 141 9.1E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS00280 ff80348fc3fff71c615fd765b0b71105 271 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 175 209 3.5E-5 T 11-11-2016 IPR006530 YD repeat ATY42_RS00280 ff80348fc3fff71c615fd765b0b71105 271 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 231 259 0.0023 T 11-11-2016 IPR006530 YD repeat ATY42_RS17275 c617117c57e18e44a846e5e71d3e97ff 216 PIRSF PIRSF037290 16 215 1.4E-81 T 11-11-2016 IPR017166 Uncharacterised conserved protein UCP037290 ATY42_RS17275 c617117c57e18e44a846e5e71d3e97ff 216 Gene3D G3DSA:3.40.50.300 62 174 5.1E-38 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17275 c617117c57e18e44a846e5e71d3e97ff 216 SUPERFAMILY SSF52540 61 174 1.27E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 Gene3D G3DSA:3.40.50.2300 16 132 2.0E-19 T 11-11-2016 ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 SUPERFAMILY SSF52172 16 133 2.56E-20 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 SMART SM00448 14 132 1.8E-12 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 Gene3D G3DSA:3.20.20.450 161 408 2.3E-84 T 11-11-2016 IPR001633 EAL domain ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 Pfam PF00072 Response regulator receiver domain 16 131 4.9E-16 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 SMART SM00052 156 400 1.1E-85 T 11-11-2016 IPR001633 EAL domain ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 SUPERFAMILY SSF141868 162 408 7.85E-79 T 11-11-2016 IPR001633 EAL domain ATY42_RS07255 1996fe9f08f3f8f5f97067802aef18bc 427 Pfam PF00563 EAL domain 162 395 1.0E-72 T 11-11-2016 IPR001633 EAL domain ATY42_RS02895 dc3ff37a54ec6d262f00b7341cf90fcb 283 Gene3D G3DSA:1.10.10.10 13 75 2.9E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02895 dc3ff37a54ec6d262f00b7341cf90fcb 283 Pfam PF13730 Helix-turn-helix domain 13 66 7.2E-14 T 11-11-2016 ATY42_RS11490 25591cc37fb0e3428794014187e39d1f 233 Pfam PF05598 Transposase domain (DUF772) 59 132 1.7E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS18400 c0471ee2810bc20a438980700fa5ac8e 322 SUPERFAMILY SSF51569 6 320 9.84E-95 T 11-11-2016 ATY42_RS18400 c0471ee2810bc20a438980700fa5ac8e 322 Pfam PF00923 Transaldolase 17 316 6.7E-89 T 11-11-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 ATY42_RS18400 c0471ee2810bc20a438980700fa5ac8e 322 ProSitePatterns PS00958 Transaldolase active site. 133 150 - T 11-11-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 ATY42_RS18400 c0471ee2810bc20a438980700fa5ac8e 322 Gene3D G3DSA:3.20.20.70 6 319 6.2E-107 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS18400 c0471ee2810bc20a438980700fa5ac8e 322 Hamap MF_00492 Transaldolase [tal]. 5 320 47.346 T 11-11-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 ATY42_RS18400 c0471ee2810bc20a438980700fa5ac8e 322 ProSitePatterns PS01054 Transaldolase signature 1. 34 42 - T 11-11-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336 ATY42_RS01610 51a96e344460e36579ddf2f383dfa371 557 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 5 449 4.1E-182 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 ATY42_RS01610 51a96e344460e36579ddf2f383dfa371 557 Pfam PF03109 ABC1 family 110 232 1.3E-29 T 11-11-2016 IPR004147 UbiB domain ATY42_RS01610 51a96e344460e36579ddf2f383dfa371 557 Gene3D G3DSA:3.90.1200.10 243 323 7.2E-4 T 11-11-2016 ATY42_RS01610 51a96e344460e36579ddf2f383dfa371 557 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 1 554 49.615 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 ATY42_RS01610 51a96e344460e36579ddf2f383dfa371 557 SUPERFAMILY SSF56112 92 160 1.01E-32 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS01610 51a96e344460e36579ddf2f383dfa371 557 SUPERFAMILY SSF56112 201 439 1.01E-32 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS09830 eefb3a24856404b76a6895eb7f434068 131 Pfam PF04355 SmpA / OmlA family 28 98 6.3E-22 T 11-11-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 ATY42_RS09830 eefb3a24856404b76a6895eb7f434068 131 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 1 118 31.094 T 11-11-2016 IPR026592 Outer membrane protein assembly factor BamE ATY42_RS15900 b1907de40b0804b54070bf69ddfeec3d 360 SUPERFAMILY SSF46689 32 132 2.87E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS15900 b1907de40b0804b54070bf69ddfeec3d 360 Pfam PF13518 Helix-turn-helix domain 33 86 1.0E-14 T 11-11-2016 ATY42_RS15900 b1907de40b0804b54070bf69ddfeec3d 360 SUPERFAMILY SSF53098 204 334 6.83E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15900 b1907de40b0804b54070bf69ddfeec3d 360 Gene3D G3DSA:1.10.10.10 31 77 9.0E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15900 b1907de40b0804b54070bf69ddfeec3d 360 Gene3D G3DSA:3.30.420.10 202 332 5.6E-10 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15900 b1907de40b0804b54070bf69ddfeec3d 360 Pfam PF13358 DDE superfamily endonuclease 172 318 6.2E-23 T 11-11-2016 ATY42_RS08940 9e16f333d08e2592341e9609efdb0ac8 390 Pfam PF16113 Enoyl-CoA hydratase/isomerase 25 373 1.3E-111 T 11-11-2016 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ATY42_RS08940 9e16f333d08e2592341e9609efdb0ac8 390 Gene3D G3DSA:3.90.226.10 22 225 1.9E-49 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08940 9e16f333d08e2592341e9609efdb0ac8 390 Gene3D G3DSA:3.90.226.10 288 357 1.9E-49 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08940 9e16f333d08e2592341e9609efdb0ac8 390 SUPERFAMILY SSF52096 287 357 2.94E-56 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS08940 9e16f333d08e2592341e9609efdb0ac8 390 SUPERFAMILY SSF52096 20 222 2.94E-56 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS09780 e9a76bb45e11125b86475119aafb30f5 330 Gene3D G3DSA:3.40.50.2000 159 290 5.4E-16 T 11-11-2016 ATY42_RS09780 e9a76bb45e11125b86475119aafb30f5 330 SUPERFAMILY SSF53756 5 321 1.33E-46 T 11-11-2016 ATY42_RS09780 e9a76bb45e11125b86475119aafb30f5 330 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 211 298 1.3E-10 T 11-11-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ATY42_RS07035 d36ca7483e59b987addf9ecd1db16c81 80 SUPERFAMILY SSF54506 1 79 5.02E-24 T 11-11-2016 ATY42_RS07035 d36ca7483e59b987addf9ecd1db16c81 80 Gene3D G3DSA:3.10.310.10 1 69 9.9E-27 T 11-11-2016 ATY42_RS07035 d36ca7483e59b987addf9ecd1db16c81 80 Pfam PF02567 Phenazine biosynthesis-like protein 2 76 3.4E-14 T 11-11-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 SMART SM00387 388 497 1.2E-29 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 388 494 1.8E-19 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 Pfam PF00672 HAMP domain 220 287 6.2E-12 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 8.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 8.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 8.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 450 8.2E-12 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 SUPERFAMILY SSF55874 345 495 7.2E-34 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 SUPERFAMILY SSF47384 276 347 3.34E-9 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 Gene3D G3DSA:1.10.287.130 282 343 6.3E-10 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 SMART SM00304 239 291 5.5E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 SMART SM00388 292 349 1.3E-4 T 11-11-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ATY42_RS19505 b27938e6efd9d5a50883f3e29e4cd0d5 499 Gene3D G3DSA:3.30.565.10 354 497 1.9E-33 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS09320 b4c9097924444c3987355687fe49bd54 431 Pfam PF02353 Mycolic acid cyclopropane synthetase 138 406 5.1E-75 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09320 b4c9097924444c3987355687fe49bd54 431 PIRSF PIRSF003085 19 428 6.6E-113 T 11-11-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 ATY42_RS09320 b4c9097924444c3987355687fe49bd54 431 SUPERFAMILY SSF53335 23 369 5.05E-72 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09320 b4c9097924444c3987355687fe49bd54 431 Gene3D G3DSA:3.40.50.150 132 413 2.1E-92 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS12635 979808145d05c7a40e2923a7cf90f77a 373 Gene3D G3DSA:3.40.630.30 175 319 8.2E-19 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS12635 979808145d05c7a40e2923a7cf90f77a 373 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 11 372 6.9E-135 T 11-11-2016 IPR007434 Peptidogalycan biosysnthesis/recognition ATY42_RS12635 979808145d05c7a40e2923a7cf90f77a 373 SUPERFAMILY SSF55729 183 351 1.03E-35 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS18845 fb954185ce421ad0058283a32c90b98a 185 Gene3D G3DSA:1.20.1200.10 18 181 6.6E-62 T 11-11-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ATY42_RS18845 fb954185ce421ad0058283a32c90b98a 185 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 9 179 1.3E-56 T 11-11-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ATY42_RS18845 fb954185ce421ad0058283a32c90b98a 185 SUPERFAMILY SSF89028 7 179 3.53E-58 T 11-11-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ATY42_RS18845 fb954185ce421ad0058283a32c90b98a 185 Pfam PF01923 Cobalamin adenosyltransferase 8 166 6.6E-56 T 11-11-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ATY42_RS18845 fb954185ce421ad0058283a32c90b98a 185 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 28 178 1.0E-63 T 11-11-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ATY42_RS01630 a3d2d0c8c84daa0fb688f1e6259b0502 177 Pfam PF01609 Transposase DDE domain 6 135 5.0E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05540 2bbb0e9b0cf7ba14fc110dedcd37c416 441 SUPERFAMILY SSF55920 161 435 6.8E-53 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS05540 2bbb0e9b0cf7ba14fc110dedcd37c416 441 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 3 440 54.977 T 11-11-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 ATY42_RS05540 2bbb0e9b0cf7ba14fc110dedcd37c416 441 Pfam PF00557 Metallopeptidase family M24 167 427 5.5E-41 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS05540 2bbb0e9b0cf7ba14fc110dedcd37c416 441 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 332 344 - T 11-11-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ATY42_RS05540 2bbb0e9b0cf7ba14fc110dedcd37c416 441 Gene3D G3DSA:3.90.230.10 158 436 3.7E-52 T 11-11-2016 IPR000994 Peptidase M24, structural domain ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 Pfam PF00561 alpha/beta hydrolase fold 29 279 8.7E-24 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 Gene3D G3DSA:3.40.50.1820 2 293 3.7E-53 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 291 7.0E-81 T 11-11-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 PIRSF PIRSF005539 1 300 2.7E-155 T 11-11-2016 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 SUPERFAMILY SSF53474 8 292 7.63E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 57 68 4.7E-12 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 102 116 4.7E-12 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS06225 bec20d8287d3200587b9c327870c65a3 313 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 30 38 4.7E-12 T 11-11-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 ATY42_RS04485 3c69396d01d99e238ccee66a92a0baeb 153 SUPERFAMILY SSF63829 28 108 7.19E-5 T 11-11-2016 ATY42_RS04485 3c69396d01d99e238ccee66a92a0baeb 153 Pfam PF07494 Two component regulator propeller 44 66 8.5E-4 T 11-11-2016 IPR011110 Two component regulator propeller ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 PIRSF PIRSF006630 7 551 4.9E-182 T 11-11-2016 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: R-HSA-196807 ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 TIGRFAM TIGR00552 nadE: NAD+ synthetase 282 531 5.7E-58 T 11-11-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 Pfam PF02540 NAD synthase 275 524 5.5E-69 T 11-11-2016 IPR022310 NAD/GMP synthase ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 Gene3D G3DSA:3.60.110.10 9 250 2.0E-57 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 Gene3D G3DSA:3.40.50.620 274 532 1.4E-73 T 11-11-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 Pfam PF00795 Carbon-nitrogen hydrolase 12 241 5.9E-23 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 SUPERFAMILY SSF56317 9 250 1.44E-57 T 11-11-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 ATY42_RS07835 62829a2011e62ac0c522a3e17775130d 551 SUPERFAMILY SSF52402 274 533 5.07E-76 T 11-11-2016 ATY42_RS21680 97d4e92978263a554ab78e8734ada634 89 Gene3D G3DSA:1.10.1200.10 5 86 9.6E-18 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS21680 97d4e92978263a554ab78e8734ada634 89 Pfam PF00550 Phosphopantetheine attachment site 10 65 8.8E-9 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS21680 97d4e92978263a554ab78e8734ada634 89 SUPERFAMILY SSF47336 5 84 2.49E-12 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS13260 d3944ed6e0e46c69a2de2c681df11c42 416 SUPERFAMILY SSF103473 22 414 5.75E-37 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS13260 d3944ed6e0e46c69a2de2c681df11c42 416 Pfam PF05977 Transmembrane secretion effector 20 411 5.0E-33 T 11-11-2016 IPR010290 Transmembrane secretion effector ATY42_RS13260 d3944ed6e0e46c69a2de2c681df11c42 416 Gene3D G3DSA:1.20.1250.20 232 406 3.5E-13 T 11-11-2016 ATY42_RS13260 d3944ed6e0e46c69a2de2c681df11c42 416 Gene3D G3DSA:1.20.1250.20 19 205 2.4E-16 T 11-11-2016 ATY42_RS19775 ce261395e2f5f9b1a1ac0410d71254a6 67 SUPERFAMILY SSF53098 4 58 1.82E-5 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19775 ce261395e2f5f9b1a1ac0410d71254a6 67 Pfam PF13333 Integrase core domain 8 61 3.8E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS19775 ce261395e2f5f9b1a1ac0410d71254a6 67 Gene3D G3DSA:3.30.420.10 3 56 4.9E-4 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS17525 b38f8c4c1ca95d726ce9f77406901617 444 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 2 443 7.7E-144 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 ATY42_RS17525 b38f8c4c1ca95d726ce9f77406901617 444 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 16 442 1.8E-140 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 ATY42_RS01715 511cd60bb323009ec3e9678dbe79fafa 249 Pfam PF12686 Protein of unknown function (DUF3800) 8 215 3.7E-25 T 11-11-2016 IPR024524 Protein of unknown function DUF3800 ATY42_RS14385 c79f434ef261dac6357f1e2bd7824a0a 306 PIRSF PIRSF015283 1 306 1.5E-99 T 11-11-2016 IPR016631 Regulatory, RpfE ATY42_RS19550 da2205520fa77a3518e21da6ffb2d84e 115 Pfam PF01609 Transposase DDE domain 1 89 2.4E-16 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS17730 6fd2c03ad8a0d6de38fb4943b3f99e7b 59 Gene3D G3DSA:1.10.1220.10 6 48 3.3E-7 T 11-11-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ATY42_RS17730 6fd2c03ad8a0d6de38fb4943b3f99e7b 59 SUPERFAMILY SSF47598 1 54 1.45E-10 T 11-11-2016 IPR010985 Ribbon-helix-helix GO:0006355 ATY42_RS17730 6fd2c03ad8a0d6de38fb4943b3f99e7b 59 Pfam PF03869 Arc-like DNA binding domain 2 48 2.4E-4 T 11-11-2016 IPR005569 Arc-like DNA binding domain GO:0003677 ATY42_RS15960 339555196bd871fb13e8a90d7cad09d1 484 Pfam PF13727 CoA-binding domain 77 255 1.5E-31 T 11-11-2016 ATY42_RS15960 339555196bd871fb13e8a90d7cad09d1 484 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 33 484 4.4E-156 T 11-11-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 ATY42_RS15960 339555196bd871fb13e8a90d7cad09d1 484 Pfam PF02397 Bacterial sugar transferase 293 478 5.4E-55 T 11-11-2016 IPR003362 Bacterial sugar transferase ATY42_RS15960 339555196bd871fb13e8a90d7cad09d1 484 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 32 484 7.6E-147 T 11-11-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ATY42_RS00395 cee6bb985718220b51715421d0201f68 68 SUPERFAMILY SSF46689 20 64 6.95E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS10775 98aa6f4a41106d967859abf5a8075480 170 SUPERFAMILY SSF53927 14 163 2.06E-53 T 11-11-2016 IPR016193 Cytidine deaminase-like GO:0003824 ATY42_RS10775 98aa6f4a41106d967859abf5a8075480 170 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 18 115 8.1E-26 T 11-11-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 ATY42_RS10775 98aa6f4a41106d967859abf5a8075480 170 Gene3D G3DSA:3.40.140.10 11 160 8.6E-55 T 11-11-2016 ATY42_RS10775 98aa6f4a41106d967859abf5a8075480 170 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 20 163 46.161 T 11-11-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ATY42_RS10775 98aa6f4a41106d967859abf5a8075480 170 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 104 - T 11-11-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ATY42_RS02380 12ebbf9bf5f8c323b7edf8292bbc8f27 309 Gene3D G3DSA:3.90.1530.10 40 142 6.4E-40 T 11-11-2016 ATY42_RS02380 12ebbf9bf5f8c323b7edf8292bbc8f27 309 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 45 219 7.4E-57 T 11-11-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ATY42_RS02380 12ebbf9bf5f8c323b7edf8292bbc8f27 309 SMART SM00470 46 136 3.0E-36 T 11-11-2016 IPR003115 ParB/Sulfiredoxin ATY42_RS02380 12ebbf9bf5f8c323b7edf8292bbc8f27 309 SUPERFAMILY SSF110849 45 180 2.09E-33 T 11-11-2016 IPR003115 ParB/Sulfiredoxin ATY42_RS02380 12ebbf9bf5f8c323b7edf8292bbc8f27 309 Pfam PF02195 ParB-like nuclease domain 48 136 2.2E-27 T 11-11-2016 IPR003115 ParB/Sulfiredoxin ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 SUPERFAMILY SSF51905 317 403 4.89E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 SUPERFAMILY SSF51905 134 232 4.89E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 SUPERFAMILY SSF51905 7 90 4.89E-28 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 Gene3D G3DSA:3.50.50.60 5 75 9.5E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 Gene3D G3DSA:3.50.50.60 312 356 9.5E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 Gene3D G3DSA:3.50.50.60 150 230 9.5E-50 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 PIRSF PIRSF011396 1 494 1.4E-184 T 11-11-2016 IPR006905 Tryptophan halogenase ATY42_RS06190 eba6b2197b0f4056840f5889270043b5 505 Pfam PF04820 Tryptophan halogenase 8 457 8.3E-193 T 11-11-2016 IPR006905 Tryptophan halogenase ATY42_RS13990 7e70a2d7f16479d615f661d262dbf760 309 Pfam PF13503 Domain of unknown function (DUF4123) 61 156 8.8E-10 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS20695 a992dbe1b55958452f1bb0445c17dfb3 128 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 1.9E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS12200 a992dbe1b55958452f1bb0445c17dfb3 128 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 1.9E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS16950 51efe271e09570af43064f83233649df 320 SMART SM01126 137 263 2.4E-5 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16950 51efe271e09570af43064f83233649df 320 Pfam PF12762 ISXO2-like transposase domain 137 212 1.4E-9 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16950 51efe271e09570af43064f83233649df 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.1E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Gene3D G3DSA:3.30.9.10 135 193 3.7E-17 T 11-11-2016 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Gene3D G3DSA:3.30.9.10 269 353 3.7E-17 T 11-11-2016 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 SUPERFAMILY SSF54373 270 360 1.7E-18 T 11-11-2016 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Gene3D G3DSA:3.40.50.720 354 416 7.5E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Gene3D G3DSA:3.40.50.720 1 96 7.5E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Gene3D G3DSA:3.40.50.720 194 268 7.5E-45 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 48.756 T 11-11-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 SUPERFAMILY SSF51905 1 54 1.42E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 SUPERFAMILY SSF51905 360 417 1.42E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 SUPERFAMILY SSF51905 107 270 1.42E-51 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS03325 0d0148bfded51a43c32924a215c6d213 429 Pfam PF01266 FAD dependent oxidoreductase 3 398 2.2E-65 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATY42_RS01085 95134491ab8273516353f58ccd20f54f 336 PIRSF PIRSF019271 33 336 8.5E-101 T 11-11-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 ATY42_RS01085 95134491ab8273516353f58ccd20f54f 336 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 66 308 3.3E-42 T 11-11-2016 IPR005519 Acid phosphatase, class B-like ATY42_RS01085 95134491ab8273516353f58ccd20f54f 336 SUPERFAMILY SSF56784 127 315 1.25E-30 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS01085 95134491ab8273516353f58ccd20f54f 336 Gene3D G3DSA:3.40.50.1000 89 316 3.6E-44 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS03745 011b9defff879d6bfa69d2c0274b1c6b 72 Pfam PF04325 Protein of unknown function (DUF465) 20 66 2.3E-12 T 11-11-2016 IPR007420 Protein of unknown function DUF465 ATY42_RS14305 3a67bf087168192a19ffa07134ffafdf 82 SUPERFAMILY SSF89447 2 42 5.76E-11 T 11-11-2016 ATY42_RS14305 3a67bf087168192a19ffa07134ffafdf 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 43 5.5E-11 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ATY42_RS14305 3a67bf087168192a19ffa07134ffafdf 82 SMART SM00966 3 46 3.4E-11 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ATY42_RS14305 3a67bf087168192a19ffa07134ffafdf 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 3 42 1.2E-12 T 11-11-2016 IPR007159 SpoVT-AbrB domain GO:0003677 ATY42_RS14305 3a67bf087168192a19ffa07134ffafdf 82 Gene3D G3DSA:2.10.260.10 2 42 6.3E-14 T 11-11-2016 ATY42_RS00745 93a8d760912e09a895c1de9e29bcccb5 261 PIRSF PIRSF033949 1 261 1.3E-100 T 11-11-2016 IPR012390 Phosphoesterase SP1827 ATY42_RS00745 93a8d760912e09a895c1de9e29bcccb5 261 SUPERFAMILY SSF55144 28 260 1.12E-54 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase ATY42_RS00745 93a8d760912e09a895c1de9e29bcccb5 261 Pfam PF08975 Domain of unknown function (DUF1868) 42 158 7.6E-30 T 11-11-2016 IPR015069 Domain of unknown function DUF1868 ATY42_RS00745 93a8d760912e09a895c1de9e29bcccb5 261 Gene3D G3DSA:3.90.1140.10 15 261 9.1E-80 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 SUPERFAMILY SSF52833 5 159 1.96E-61 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 11-11-2016 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 PIRSF PIRSF000303 1 161 6.4E-65 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 PRINTS PR01011 Glutathione peroxidase family signature 22 39 6.1E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 PRINTS PR01011 Glutathione peroxidase family signature 123 132 6.1E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 PRINTS PR01011 Glutathione peroxidase family signature 57 73 6.1E-21 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 Pfam PF00255 Glutathione peroxidase 6 111 1.3E-39 T 11-11-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ATY42_RS11610 3f9799c49aa8e5f37e4dba547c0006e5 161 Gene3D G3DSA:3.40.30.10 5 160 1.1E-69 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS03280 9c630ec12a17d2afa6eb9941174e7095 94 Pfam PF13223 Protein of unknown function (DUF4031) 3 80 4.0E-29 T 11-11-2016 IPR025109 Domain of unknown function DUF4031 ATY42_RS19955 3aef730fa4c1feedc0022a80ea510124 161 PIRSF PIRSF018472 1 160 3.4E-51 T 11-11-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type ATY42_RS19955 3aef730fa4c1feedc0022a80ea510124 161 Pfam PF04093 rod shape-determining protein MreD 3 152 4.2E-34 T 11-11-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ATY42_RS19955 3aef730fa4c1feedc0022a80ea510124 161 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 6 151 1.8E-33 T 11-11-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ATY42_RS10795 13ed677a3bd6d720dffda4f79c71351c 273 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 4 272 71.008 T 11-11-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein ATY42_RS10795 13ed677a3bd6d720dffda4f79c71351c 273 Pfam PF03618 Kinase/pyrophosphorylase 7 263 3.3E-71 T 11-11-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 ATY42_RS18290 41897726117dfd685b48e7a59f2b2416 497 Gene3D G3DSA:3.40.50.1220 270 448 5.0E-80 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS18290 41897726117dfd685b48e7a59f2b2416 497 PIRSF PIRSF000204 9 448 2.0E-146 T 11-11-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ATY42_RS18290 41897726117dfd685b48e7a59f2b2416 497 Pfam PF02233 NAD(P) transhydrogenase beta subunit 19 444 2.0E-153 T 11-11-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ATY42_RS18290 41897726117dfd685b48e7a59f2b2416 497 SUPERFAMILY SSF52467 274 447 1.26E-69 T 11-11-2016 IPR029035 DHS-like NAD/FAD-binding domain ATY42_RS03440 43c31d7ad64b666dbf3a85293f12e768 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 56 231 1.0E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS03440 43c31d7ad64b666dbf3a85293f12e768 231 Gene3D G3DSA:1.10.3720.10 18 226 2.8E-36 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS03440 43c31d7ad64b666dbf3a85293f12e768 231 SUPERFAMILY SSF161098 20 220 1.18E-40 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS11355 163721d6ef935a71e5181f60ae3c9585 472 Gene3D G3DSA:2.120.10.30 164 460 1.7E-39 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS11355 163721d6ef935a71e5181f60ae3c9585 472 SUPERFAMILY SSF52833 6 130 8.87E-19 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS11355 163721d6ef935a71e5181f60ae3c9585 472 SUPERFAMILY SSF101898 166 463 3.14E-28 T 11-11-2016 ATY42_RS11355 163721d6ef935a71e5181f60ae3c9585 472 Pfam PF01436 NHL repeat 166 189 7.7E-5 T 11-11-2016 IPR001258 NHL repeat GO:0005515 ATY42_RS11355 163721d6ef935a71e5181f60ae3c9585 472 Pfam PF01436 NHL repeat 219 243 6.4E-5 T 11-11-2016 IPR001258 NHL repeat GO:0005515 ATY42_RS11355 163721d6ef935a71e5181f60ae3c9585 472 Gene3D G3DSA:3.40.30.10 5 142 2.1E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18590 5e3470b19917a647d80fce42739789a7 402 SUPERFAMILY SSF53383 11 398 7.24E-115 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS18590 5e3470b19917a647d80fce42739789a7 402 Gene3D G3DSA:3.40.640.10 61 281 1.3E-89 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS18590 5e3470b19917a647d80fce42739789a7 402 Gene3D G3DSA:3.90.1150.10 282 395 3.1E-30 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS18590 5e3470b19917a647d80fce42739789a7 402 Pfam PF00155 Aminotransferase class I and II 46 389 8.3E-64 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS18590 5e3470b19917a647d80fce42739789a7 402 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 8 400 1.7E-223 T 11-11-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 ATY42_RS18590 5e3470b19917a647d80fce42739789a7 402 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 5 398 53.029 T 11-11-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 ATY42_RS13290 54af33974f0895f7e4abb6178b7e2e53 279 Pfam PF01551 Peptidase family M23 176 271 1.0E-28 T 11-11-2016 IPR016047 Peptidase M23 ATY42_RS13290 54af33974f0895f7e4abb6178b7e2e53 279 Gene3D G3DSA:2.70.70.10 127 276 9.5E-45 T 11-11-2016 ATY42_RS13290 54af33974f0895f7e4abb6178b7e2e53 279 SUPERFAMILY SSF51261 47 275 2.09E-54 T 11-11-2016 IPR011055 Duplicated hybrid motif ATY42_RS13230 4715898d426a93b121b54f36f817bb93 150 Gene3D G3DSA:3.40.630.30 4 127 6.0E-31 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS13230 4715898d426a93b121b54f36f817bb93 150 SUPERFAMILY SSF55729 17 126 7.15E-18 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS13230 4715898d426a93b121b54f36f817bb93 150 Pfam PF00583 Acetyltransferase (GNAT) family 58 125 2.8E-10 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS22320 c22941b7f891ccec2967aa1fb0f10275 86 Pfam PF13586 Transposase DDE domain 2 82 2.7E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS01655 c22941b7f891ccec2967aa1fb0f10275 86 Pfam PF13586 Transposase DDE domain 2 82 2.7E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 Gene3D G3DSA:3.40.190.10 195 254 5.2E-11 T 11-11-2016 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 SUPERFAMILY SSF53850 91 288 8.53E-25 T 11-11-2016 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 SUPERFAMILY SSF46785 3 85 5.01E-24 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-9 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 Gene3D G3DSA:3.40.190.10 88 194 1.3E-7 T 11-11-2016 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.5E-22 T 11-11-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 Gene3D G3DSA:1.10.10.10 4 87 1.6E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10715 c5435c2286bd1f56f00e9d8f1cac228c 296 Pfam PF03466 LysR substrate binding domain 90 288 8.1E-23 T 11-11-2016 IPR005119 LysR, substrate-binding ATY42_RS16925 fc95c798347b2396de31b19cd97628c1 237 Gene3D G3DSA:3.90.850.10 22 228 3.9E-71 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS16925 fc95c798347b2396de31b19cd97628c1 237 SUPERFAMILY SSF56529 22 229 1.7E-62 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS16925 fc95c798347b2396de31b19cd97628c1 237 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 26 228 6.3E-52 T 11-11-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 23 536 1.7E-176 T 11-11-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 SUPERFAMILY SSF69349 462 619 4.32E-37 T 11-11-2016 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 SUPERFAMILY SSF69349 676 743 4.32E-37 T 11-11-2016 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 Gene3D G3DSA:2.40.50.230 390 472 1.6E-38 T 11-11-2016 IPR006531 Gp5 N-terminal ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 SUPERFAMILY SSF69279 211 383 3.06E-20 T 11-11-2016 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 SUPERFAMILY SSF69279 25 199 4.48E-53 T 11-11-2016 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 Gene3D G3DSA:3.55.50.10 110 202 7.9E-32 T 11-11-2016 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 35 519 3.5E-123 T 11-11-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 Pfam PF05954 Phage late control gene D protein (GPD) 43 350 6.4E-84 T 11-11-2016 ATY42_RS08045 c000d6b9a1c9570888e2a1539251f116 748 SUPERFAMILY SSF69255 386 472 4.18E-32 T 11-11-2016 ATY42_RS23040 32d6ae5d6bd5e23a08b5b8aec5fe550b 230 SUPERFAMILY SSF144091 15 215 1.03E-32 T 11-11-2016 ATY42_RS23040 32d6ae5d6bd5e23a08b5b8aec5fe550b 230 Gene3D G3DSA:1.20.1540.10 14 216 4.5E-37 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS23040 32d6ae5d6bd5e23a08b5b8aec5fe550b 230 Pfam PF01694 Rhomboid family 64 217 5.6E-34 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS14245 32aa58ea9b201b7864c5b528d2a74c72 182 SUPERFAMILY SSF53098 12 146 3.19E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14245 32aa58ea9b201b7864c5b528d2a74c72 182 Pfam PF01609 Transposase DDE domain 71 132 1.6E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07215 f2189f51ff200ba84775f2472eada179 237 Pfam PF04493 Endonuclease V 24 218 1.5E-68 T 11-11-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 ATY42_RS07215 f2189f51ff200ba84775f2472eada179 237 Hamap MF_00801 Endonuclease V [nfi]. 14 227 34.809 T 11-11-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 317 2.8E-130 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 310 2.7E-113 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 Pfam PF00814 Glycoprotease family 29 311 1.7E-99 T 11-11-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 SUPERFAMILY SSF53067 105 313 3.88E-40 T 11-11-2016 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 Gene3D G3DSA:3.30.420.40 2 163 2.7E-47 T 11-11-2016 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.6E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.6E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 1.6E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 1.6E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 135 147 1.6E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 158 179 1.6E-51 T 11-11-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 SUPERFAMILY SSF53067 3 127 1.17E-30 T 11-11-2016 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 335 63.389 T 11-11-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 ATY42_RS20765 f876ef139a0988f973ed322ad3437d75 354 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 11-11-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 ATY42_RS11145 87f9018b95952c877e5bda4263a99b73 397 Pfam PF05707 Zonular occludens toxin (Zot) 3 184 8.1E-20 T 11-11-2016 IPR008900 Zona occludens toxin ATY42_RS11145 87f9018b95952c877e5bda4263a99b73 397 Gene3D G3DSA:3.40.50.300 1 185 6.8E-49 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS16050 ed890b3eeba8defa21a7c1f2f8767a5d 180 SUPERFAMILY SSF54523 14 149 9.42E-19 T 11-11-2016 ATY42_RS16050 ed890b3eeba8defa21a7c1f2f8767a5d 180 Gene3D G3DSA:3.30.700.10 13 54 5.3E-5 T 11-11-2016 ATY42_RS16050 ed890b3eeba8defa21a7c1f2f8767a5d 180 Pfam PF12019 Type II transport protein GspH 51 164 1.3E-18 T 11-11-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 ATY42_RS10330 f775e5ee7fe609c68011dbd8bb569871 1171 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 573 774 2.6E-131 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS10330 f775e5ee7fe609c68011dbd8bb569871 1171 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 302 503 2.9E-134 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 SUPERFAMILY SSF52096 5 316 1.91E-103 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 50.935 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 4.7E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 4.7E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 4.7E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 4.7E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 4.7E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 4.7E-49 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 Gene3D G3DSA:3.90.226.10 57 272 2.7E-52 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 2.3E-154 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS09525 0499f0de724393967ef2eccc029e24d0 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 5.5E-63 T 11-11-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388 ATY42_RS12790 536b150d077e89ebf56d78e466a0125a 401 Pfam PF00700 Bacterial flagellin C-terminal helical region 318 400 3.4E-5 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12790 536b150d077e89ebf56d78e466a0125a 401 Gene3D G3DSA:1.20.1330.10 305 356 5.4E-21 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12790 536b150d077e89ebf56d78e466a0125a 401 Gene3D G3DSA:1.20.1330.10 59 169 5.4E-21 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12790 536b150d077e89ebf56d78e466a0125a 401 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 400 9.3E-109 T 11-11-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 ATY42_RS12790 536b150d077e89ebf56d78e466a0125a 401 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 5.6E-21 T 11-11-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ATY42_RS12790 536b150d077e89ebf56d78e466a0125a 401 SUPERFAMILY SSF64518 1 401 4.45E-75 T 11-11-2016 ATY42_RS20570 ce6712435c02511f5c00a58889ada49c 269 Pfam PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) 1 114 1.3E-17 T 11-11-2016 IPR002654 Glycosyl transferase, family 25 ATY42_RS12505 0e3ebaf8f30d95f6e4c8873db6fc7f75 78 SUPERFAMILY SSF46689 11 77 2.15E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12505 0e3ebaf8f30d95f6e4c8873db6fc7f75 78 Pfam PF13551 Winged helix-turn helix 18 77 3.1E-16 T 11-11-2016 ATY42_RS03685 7fbf31705d39b6b2c18c27420b6c7964 132 Gene3D G3DSA:1.10.150.20 5 82 3.3E-25 T 11-11-2016 ATY42_RS03685 7fbf31705d39b6b2c18c27420b6c7964 132 Pfam PF04994 TfoX C-terminal domain 5 78 1.6E-26 T 11-11-2016 IPR007077 TfoX, C-terminal ATY42_RS06165 55eb1ed2262bce13e1fc3bedf38f67d9 668 SUPERFAMILY SSF55486 344 570 2.73E-39 T 11-11-2016 ATY42_RS06165 55eb1ed2262bce13e1fc3bedf38f67d9 668 Gene3D G3DSA:1.10.390.10 428 570 1.3E-15 T 11-11-2016 ATY42_RS14140 2668d5ed613337725f30c67796d1ddb1 324 Gene3D G3DSA:3.30.1330.60 148 271 2.7E-32 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS14140 2668d5ed613337725f30c67796d1ddb1 324 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 57 1.7E-22 T 11-11-2016 IPR025713 Motility protein B, N-terminal domain ATY42_RS14140 2668d5ed613337725f30c67796d1ddb1 324 Pfam PF00691 OmpA family 167 265 1.8E-17 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS14140 2668d5ed613337725f30c67796d1ddb1 324 SUPERFAMILY SSF103088 142 271 1.57E-30 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 SUPERFAMILY SSF50447 5 215 3.97E-78 T 11-11-2016 IPR009000 Translation protein, beta-barrel domain ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 Gene3D G3DSA:4.10.960.10 82 164 2.7E-33 T 11-11-2016 ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 Gene3D G3DSA:2.40.30.10 8 37 8.2E-9 T 11-11-2016 ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 Gene3D G3DSA:2.40.30.10 165 211 8.2E-9 T 11-11-2016 ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 ProSitePatterns PS00474 Ribosomal protein L3 signature. 108 131 - T 11-11-2016 IPR019926 Ribosomal protein L3, conserved site ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 Pfam PF00297 Ribosomal protein L3 103 189 5.0E-15 T 11-11-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 6 214 38.974 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18045 8f66f8842f0aab274a084bef4d093f0d 216 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 8 211 3.1E-85 T 11-11-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 SUPERFAMILY SSF143975 4 418 3.66E-133 T 11-11-2016 ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 Pfam PF00920 Dehydratase family 34 603 1.2E-215 T 11-11-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 606 44.619 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 606 2.0E-247 T 11-11-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 SUPERFAMILY SSF52016 419 607 1.8E-60 T 11-11-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ATY42_RS21270 f73638348cd63084b9d52c4faff462ac 612 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 507 518 - T 11-11-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ATY42_RS05700 81d2fea11ef977875aacd80dd9bc9bce 335 Pfam PF00092 von Willebrand factor type A domain 101 291 4.1E-26 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05700 81d2fea11ef977875aacd80dd9bc9bce 335 SMART SM00327 98 298 1.7E-23 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05700 81d2fea11ef977875aacd80dd9bc9bce 335 SUPERFAMILY SSF53300 96 294 2.08E-36 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS05700 81d2fea11ef977875aacd80dd9bc9bce 335 Gene3D G3DSA:3.40.50.410 96 293 4.7E-27 T 11-11-2016 IPR002035 von Willebrand factor, type A ATY42_RS22360 72326b0efb61b635a8457fcf43b0139c 117 Pfam PF11379 Protein of unknown function (DUF3182) 5 87 1.1E-17 T 11-11-2016 IPR021519 Protein of unknown function DUF3182 ATY42_RS04710 897d53a508acf6759eda306bb391989a 281 Pfam PF13276 HTH-like domain 46 98 3.1E-9 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS04710 897d53a508acf6759eda306bb391989a 281 Gene3D G3DSA:3.30.420.10 109 265 1.5E-40 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04710 897d53a508acf6759eda306bb391989a 281 SUPERFAMILY SSF53098 108 268 5.56E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04710 897d53a508acf6759eda306bb391989a 281 Pfam PF13683 Integrase core domain 199 264 2.0E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS04630 1ab766b2c863b1f8717f7f2e10ea8c5e 198 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 13 198 4.7E-16 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ATY42_RS04630 1ab766b2c863b1f8717f7f2e10ea8c5e 198 SMART SM00464 12 198 8.2E-5 T 11-11-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 ATY42_RS04630 1ab766b2c863b1f8717f7f2e10ea8c5e 198 SUPERFAMILY SSF88697 13 198 2.73E-42 T 11-11-2016 IPR015947 PUA-like domain ATY42_RS14045 ca35b2d46be119d039935972d071db6d 104 Gene3D G3DSA:1.10.10.10 1 71 1.9E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14045 ca35b2d46be119d039935972d071db6d 104 SUPERFAMILY SSF48295 3 69 7.32E-14 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ATY42_RS14045 ca35b2d46be119d039935972d071db6d 104 Pfam PF06627 Protein of unknown function (DUF1153) 5 62 1.4E-7 T 11-11-2016 IPR009534 Protein of unknown function DUF1153 ATY42_RS01780 5a497ea7b409c79af2ad839e34fc262e 337 Gene3D G3DSA:2.60.120.650 9 258 3.6E-39 T 11-11-2016 ATY42_RS01780 5a497ea7b409c79af2ad839e34fc262e 337 Pfam PF13621 Cupin-like domain 18 260 6.9E-56 T 11-11-2016 ATY42_RS01780 5a497ea7b409c79af2ad839e34fc262e 337 SUPERFAMILY SSF51197 8 318 7.14E-56 T 11-11-2016 ATY42_RS01780 5a497ea7b409c79af2ad839e34fc262e 337 SMART SM00558 100 272 1.3E-5 T 11-11-2016 IPR003347 JmjC domain ATY42_RS18510 2a29e8c45c92aa52228a1a94c6dcc7ef 274 SUPERFAMILY SSF47240 66 270 1.52E-22 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS18510 2a29e8c45c92aa52228a1a94c6dcc7ef 274 PIRSF PIRSF012318 6 274 3.5E-105 T 11-11-2016 IPR011197 Uncharacterised conserved protein UCP012318 ATY42_RS18510 2a29e8c45c92aa52228a1a94c6dcc7ef 274 Pfam PF04305 Protein of unknown function (DUF455) 21 266 3.3E-98 T 11-11-2016 IPR007402 Protein of unknown function DUF455 ATY42_RS06235 86420fe082192614c9dd88efcfe351d4 462 Pfam PF00324 Amino acid permease 28 458 1.7E-91 T 11-11-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 ATY42_RS06235 86420fe082192614c9dd88efcfe351d4 462 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 11-11-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ATY42_RS06235 86420fe082192614c9dd88efcfe351d4 462 PIRSF PIRSF006060 5 460 2.7E-69 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS01190 2a51358d047d10cbc38b9ab86c6d8e61 68 SUPERFAMILY SSF53098 4 54 6.07E-5 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07025 c6ccd8d5d1b06a2227f8ebc6b9144655 199 Pfam PF05433 Glycine zipper 2TM domain 99 137 8.5E-7 T 11-11-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ATY42_RS03960 1a7a8d2f0ceb22caf786455ad0f773c9 346 SMART SM00656 20 283 3.7E-56 T 11-11-2016 IPR002022 Pectate lyase/Amb allergen ATY42_RS03960 1a7a8d2f0ceb22caf786455ad0f773c9 346 Gene3D G3DSA:2.160.20.10 4 346 1.9E-96 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS03960 1a7a8d2f0ceb22caf786455ad0f773c9 346 SUPERFAMILY SSF51126 4 345 7.86E-79 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS03960 1a7a8d2f0ceb22caf786455ad0f773c9 346 Pfam PF00544 Pectate lyase 46 277 7.8E-54 T 11-11-2016 IPR002022 Pectate lyase/Amb allergen ATY42_RS22400 8595a008431125a2a7f0e86ba73ff2a4 309 SUPERFAMILY SSF53098 3 308 3.19E-26 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22400 8595a008431125a2a7f0e86ba73ff2a4 309 Pfam PF01609 Transposase DDE domain 72 308 1.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04650 8de7905fa4e1b2860e7ade2ee7a07ce3 204 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 190 5.0E-10 T 11-11-2016 IPR004046 Glutathione S-transferase, C-terminal ATY42_RS04650 8de7905fa4e1b2860e7ade2ee7a07ce3 204 Gene3D G3DSA:3.40.30.10 1 87 1.5E-20 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS04650 8de7905fa4e1b2860e7ade2ee7a07ce3 204 Gene3D G3DSA:1.20.1050.10 88 190 2.4E-25 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS04650 8de7905fa4e1b2860e7ade2ee7a07ce3 204 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 70 3.6E-9 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS04650 8de7905fa4e1b2860e7ade2ee7a07ce3 204 SUPERFAMILY SSF52833 1 78 4.12E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS04650 8de7905fa4e1b2860e7ade2ee7a07ce3 204 SUPERFAMILY SSF47616 79 202 7.52E-23 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS19835 3b818cc39bf10a363cf2fdea7e5478a7 253 Pfam PF10001 Uncharacterized protein conserved in bacteria (DUF2242) 54 173 1.0E-46 T 11-11-2016 IPR018718 Protein of unknown function DUF2242 ATY42_RS13620 5f8cd8dff00227497e66457224233ea8 96 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 94 5.4E-18 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ATY42_RS02505 e791ec63660737e1ebc7c4615bf0addb 128 SUPERFAMILY SSF89360 23 117 1.67E-29 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS02505 e791ec63660737e1ebc7c4615bf0addb 128 Gene3D G3DSA:2.60.300.12 23 117 4.2E-31 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS02505 e791ec63660737e1ebc7c4615bf0addb 128 Pfam PF01521 Iron-sulphur cluster biosynthesis 23 123 1.4E-18 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS02505 e791ec63660737e1ebc7c4615bf0addb 128 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 25 128 2.0E-37 T 11-11-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 ATY42_RS02505 e791ec63660737e1ebc7c4615bf0addb 128 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 109 126 - T 11-11-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site ATY42_RS02505 e791ec63660737e1ebc7c4615bf0addb 128 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 7 128 35.561 T 11-11-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 ATY42_RS11725 cf9107a903981fc9a85f058ba69d8096 114 SUPERFAMILY SSF143120 23 73 5.23E-9 T 11-11-2016 ATY42_RS11725 cf9107a903981fc9a85f058ba69d8096 114 Gene3D G3DSA:3.40.1620.10 27 58 1.8E-8 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATY42_RS11725 cf9107a903981fc9a85f058ba69d8096 114 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 25 73 3.4E-9 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATY42_RS11725 cf9107a903981fc9a85f058ba69d8096 114 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 26 61 6.6E-9 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATY42_RS00845 d5fb7abe693c9ad21de64bf3457eee99 86 Gene3D G3DSA:3.60.21.10 6 62 4.6E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS00845 d5fb7abe693c9ad21de64bf3457eee99 86 SUPERFAMILY SSF56300 5 68 6.94E-13 T 11-11-2016 IPR029052 Metallo-dependent phosphatase-like ATY42_RS00845 d5fb7abe693c9ad21de64bf3457eee99 86 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 6 65 6.8E-13 T 11-11-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 ATY42_RS07650 136a8673346a4a3d1b4c0a11dcd4eaa7 558 Pfam PF00144 Beta-lactamase 68 398 2.3E-69 T 11-11-2016 IPR001466 Beta-lactamase-related ATY42_RS07650 136a8673346a4a3d1b4c0a11dcd4eaa7 558 SUPERFAMILY SSF56601 60 392 4.83E-85 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS07650 136a8673346a4a3d1b4c0a11dcd4eaa7 558 Pfam PF11954 Domain of unknown function (DUF3471) 443 548 5.4E-31 T 11-11-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal ATY42_RS07650 136a8673346a4a3d1b4c0a11dcd4eaa7 558 Gene3D G3DSA:3.40.710.10 69 411 6.3E-86 T 11-11-2016 IPR012338 Beta-lactamase/transpeptidase-like ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 PIRSF PIRSF019169 1 352 3.4E-129 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 8 351 2.0E-140 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 Gene3D G3DSA:3.30.420.40 8 104 2.0E-5 T 11-11-2016 ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 Gene3D G3DSA:3.30.420.40 194 313 8.8E-26 T 11-11-2016 ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 SUPERFAMILY SSF53067 190 350 2.01E-24 T 11-11-2016 ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 SUPERFAMILY SSF53067 59 173 2.27E-8 T 11-11-2016 ATY42_RS05645 45bb36ff9f84bef1869baea889ad3668 352 Pfam PF11104 Type IV pilus assembly protein PilM; 13 351 2.2E-134 T 11-11-2016 IPR005883 Type IV pilus assembly protein PilM ATY42_RS09500 fba5b42bc918357abd46ed85408bab17 447 Pfam PF12679 ABC-2 family transporter protein 31 297 3.6E-9 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 ATY42_RS09500 fba5b42bc918357abd46ed85408bab17 447 Pfam PF12040 Domain of unknown function (DUF3526) 307 444 5.0E-29 T 11-11-2016 IPR021913 Protein of unknown function DUF3526 ATY42_RS14650 3d4756eed7896c6d3e682b4d05085913 99 Gene3D G3DSA:1.10.530.10 2 67 1.6E-20 T 11-11-2016 ATY42_RS14650 3d4756eed7896c6d3e682b4d05085913 99 SUPERFAMILY SSF53955 2 65 6.19E-17 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 SUPERFAMILY SSF81296 35 124 1.23E-10 T 11-11-2016 IPR014756 Immunoglobulin E-set ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 141 222 1.4E-21 T 11-11-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Gene3D G3DSA:2.60.40.10 137 235 3.6E-34 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Gene3D G3DSA:2.60.40.10 38 123 1.2E-10 T 11-11-2016 IPR013783 Immunoglobulin-like fold ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 SUPERFAMILY SSF51011 639 743 1.39E-30 T 11-11-2016 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 132 740 1.9E-257 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Gene3D G3DSA:2.60.40.1180 639 742 3.4E-32 T 11-11-2016 IPR013780 Glycosyl hydrolase, all-beta ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 SMART SM00642 265 610 2.6E-6 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Gene3D G3DSA:3.20.20.80 258 623 1.9E-88 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 SUPERFAMILY SSF51445 195 634 1.39E-106 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 117 743 42.342 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Pfam PF00128 Alpha amylase, catalytic domain 290 363 8.1E-5 T 11-11-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 643 742 1.7E-21 T 11-11-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 ATY42_RS00340 fdb875e136443df54faa999fe59bcd19 744 PIRSF PIRSF000463 25 744 6.7E-270 T 11-11-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ATY42_RS17250 15e788e7967f56260c6e0bac3937a366 656 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 10 612 8.4E-178 T 11-11-2016 IPR004814 Oligopeptide transporter OPT ATY42_RS17250 15e788e7967f56260c6e0bac3937a366 656 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 4 608 3.3E-86 T 11-11-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 ATY42_RS17250 15e788e7967f56260c6e0bac3937a366 656 Pfam PF03169 OPT oligopeptide transporter protein 9 611 2.1E-125 T 11-11-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 ATY42_RS15425 12d870fecd32adf56d5cebcf51ad037a 86 Pfam PF13586 Transposase DDE domain 2 82 4.4E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS15875 a3da8706a96d5a1d6bc74bdf1db2a1b1 343 Pfam PF13358 DDE superfamily endonuclease 171 308 1.0E-28 T 11-11-2016 ATY42_RS15875 a3da8706a96d5a1d6bc74bdf1db2a1b1 343 Pfam PF13592 Winged helix-turn helix 95 154 2.5E-17 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS15875 a3da8706a96d5a1d6bc74bdf1db2a1b1 343 Pfam PF13551 Winged helix-turn helix 18 77 9.0E-15 T 11-11-2016 ATY42_RS15875 a3da8706a96d5a1d6bc74bdf1db2a1b1 343 SUPERFAMILY SSF46689 13 129 1.97E-15 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS03170 6587aee64ba6aa6888270dcbb6e2f60d 231 SUPERFAMILY SSF53448 1 200 1.13E-34 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS03170 6587aee64ba6aa6888270dcbb6e2f60d 231 Pfam PF00535 Glycosyl transferase family 2 3 124 6.9E-16 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS03170 6587aee64ba6aa6888270dcbb6e2f60d 231 Gene3D G3DSA:3.90.550.10 2 221 9.1E-29 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS07320 c07536c82871ebd869183af5463763fa 127 Pfam PF06123 Inner membrane protein CreD 1 57 8.8E-7 T 11-11-2016 IPR010364 Uncharacterised protein family, inner membrane CreD ATY42_RS03455 90e155927d6eac148f1d317e62194069 228 SUPERFAMILY SSF56925 56 228 1.18E-18 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS03455 90e155927d6eac148f1d317e62194069 228 Gene3D G3DSA:2.40.160.20 49 228 7.6E-44 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS03455 90e155927d6eac148f1d317e62194069 228 Pfam PF03922 OmpW family 70 228 1.6E-37 T 11-11-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 ATY42_RS06800 93aca8d91de5b8c2181a9ce8607e463b 241 Pfam PF00665 Integrase core domain 113 196 6.1E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS06800 93aca8d91de5b8c2181a9ce8607e463b 241 SUPERFAMILY SSF53098 108 185 3.95E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06800 93aca8d91de5b8c2181a9ce8607e463b 241 Gene3D G3DSA:3.30.420.10 109 195 1.1E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22790 e98f20378c6320acfc7ea0d8b1aa9613 290 Pfam PF04909 Amidohydrolase 4 277 1.1E-38 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS22790 e98f20378c6320acfc7ea0d8b1aa9613 290 Gene3D G3DSA:3.20.20.140 3 280 3.5E-71 T 11-11-2016 ATY42_RS22790 e98f20378c6320acfc7ea0d8b1aa9613 290 SUPERFAMILY SSF51556 3 277 3.63E-66 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS08825 51eeb9fea8c5f5b6661842ed24e7c139 343 Pfam PF00561 alpha/beta hydrolase fold 60 324 8.8E-19 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS08825 51eeb9fea8c5f5b6661842ed24e7c139 343 PIRSF PIRSF000443 1 343 6.4E-74 T 11-11-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 ATY42_RS08825 51eeb9fea8c5f5b6661842ed24e7c139 343 SUPERFAMILY SSF53474 44 336 1.05E-49 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS08825 51eeb9fea8c5f5b6661842ed24e7c139 343 Gene3D G3DSA:3.40.50.1820 45 336 1.1E-29 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 PIRSF PIRSF000498 1 199 8.8E-73 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 Pfam PF00677 Lumazine binding domain 3 87 6.3E-21 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 Pfam PF00677 Lumazine binding domain 100 184 6.1E-22 T 11-11-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 SUPERFAMILY SSF63380 1 93 5.19E-24 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 Gene3D G3DSA:2.40.30.20 105 195 2.7E-32 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 Gene3D G3DSA:2.40.30.20 5 104 8.5E-31 T 11-11-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 SUPERFAMILY SSF63380 93 195 1.53E-31 T 11-11-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 ATY42_RS19405 b8fc469c4425aa052f3fc4db144d74a8 200 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 4.9E-59 T 11-11-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ATY42_RS12405 e6b3da48637a0453a41fdefe00964924 94 Pfam PF00037 4Fe-4S binding domain 7 25 5.9E-5 T 11-11-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ATY42_RS12405 e6b3da48637a0453a41fdefe00964924 94 SUPERFAMILY SSF54862 7 72 6.42E-18 T 11-11-2016 ATY42_RS12405 e6b3da48637a0453a41fdefe00964924 94 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS12405 e6b3da48637a0453a41fdefe00964924 94 Gene3D G3DSA:3.30.70.20 7 73 9.9E-16 T 11-11-2016 ATY42_RS14430 fa2a06a93bf176282d0dcd6c5827573f 400 Gene3D G3DSA:3.90.1150.10 273 389 1.3E-9 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS14430 fa2a06a93bf176282d0dcd6c5827573f 400 SUPERFAMILY SSF53383 3 390 4.3E-106 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS14430 fa2a06a93bf176282d0dcd6c5827573f 400 Pfam PF00155 Aminotransferase class I and II 44 381 5.0E-31 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS14430 fa2a06a93bf176282d0dcd6c5827573f 400 Gene3D G3DSA:3.40.640.10 58 272 3.7E-76 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS04830 43dec6561a507a429cfef0c155674d13 394 Pfam PF13546 DDE superfamily endonuclease 18 291 7.0E-90 T 11-11-2016 ATY42_RS04830 43dec6561a507a429cfef0c155674d13 394 SUPERFAMILY SSF53098 18 339 1.21E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04725 dfa7f63e11268c68e6a9f1d0eeba0343 196 Pfam PF01609 Transposase DDE domain 22 154 9.1E-11 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS08220 9eaf689f1a9cdebfd6c7732f4a568fae 259 Pfam PF01618 MotA/TolQ/ExbB proton channel family 113 241 7.8E-38 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ATY42_RS08220 9eaf689f1a9cdebfd6c7732f4a568fae 259 TIGRFAM TIGR02796 tolQ: protein TolQ 38 253 3.8E-87 T 11-11-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 ATY42_RS05720 edf5460f6e01c0607b93c6aa6d94d2d6 105 ProDom PD069398 YJEN 22 98 4.0E-5 T 11-11-2016 IPR020528 Uncharacterised protein family YjeN ATY42_RS05720 edf5460f6e01c0607b93c6aa6d94d2d6 105 Pfam PF12395 Protein of unknown function 23 93 1.6E-8 T 11-11-2016 IPR022123 Protein of unknown function DUF3658 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 SUPERFAMILY SSF53756 210 558 8.07E-10 T 11-11-2016 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 Gene3D G3DSA:1.25.40.10 7 144 9.4E-23 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 Pfam PF14559 Tetratricopeptide repeat 68 118 9.2E-7 T 11-11-2016 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 Pfam PF13844 Glycosyl transferase family 41 367 556 1.5E-41 T 11-11-2016 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 Pfam PF13844 Glycosyl transferase family 41 206 357 9.8E-32 T 11-11-2016 IPR029489 O-GlcNAc transferase, C-terminal Reactome: R-HSA-3214847 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 SMART SM00028 57 90 1.8 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 SMART SM00028 23 56 84.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 SMART SM00028 91 124 50.0 T 11-11-2016 IPR019734 Tetratricopeptide repeat GO:0005515 ATY42_RS18190 1ddc08c9cc2e9415ea12553990db8a9a 568 SUPERFAMILY SSF48452 6 127 4.22E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS13025 6a41fcaef3a9f2d921b2ff9eda979ad7 144 Pfam PF00665 Integrase core domain 3 89 1.8E-8 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS13025 6a41fcaef3a9f2d921b2ff9eda979ad7 144 SUPERFAMILY SSF53098 3 130 1.97E-22 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13025 6a41fcaef3a9f2d921b2ff9eda979ad7 144 Gene3D G3DSA:3.30.420.10 3 125 2.0E-9 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS13025 6a41fcaef3a9f2d921b2ff9eda979ad7 144 ProSitePatterns PS01043 Transposases, IS30 family, signature. 77 93 - T 11-11-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 ATY42_RS14980 ccfcef1f6fd33ff4b3480186eb7a4c59 317 Gene3D G3DSA:2.115.10.20 217 296 7.4E-4 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS14980 ccfcef1f6fd33ff4b3480186eb7a4c59 317 SUPERFAMILY SSF75005 68 302 7.85E-26 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS03215 71646eea9b2849cb826ed32991eb25ca 185 Pfam PF02469 Fasciclin domain 51 185 2.2E-34 T 11-11-2016 IPR000782 FAS1 domain ATY42_RS03215 71646eea9b2849cb826ed32991eb25ca 185 SMART SM00554 75 185 4.6E-25 T 11-11-2016 IPR000782 FAS1 domain ATY42_RS03215 71646eea9b2849cb826ed32991eb25ca 185 SUPERFAMILY SSF82153 40 185 7.19E-42 T 11-11-2016 IPR000782 FAS1 domain ATY42_RS03215 71646eea9b2849cb826ed32991eb25ca 185 Gene3D G3DSA:2.30.180.10 40 185 4.5E-39 T 11-11-2016 IPR000782 FAS1 domain ATY42_RS08135 9b56c216af9e0c387df2d37d4cbc97f2 87 Pfam PF01527 Transposase 2 70 1.2E-21 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS08135 9b56c216af9e0c387df2d37d4cbc97f2 87 Gene3D G3DSA:1.10.10.60 7 83 4.6E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08135 9b56c216af9e0c387df2d37d4cbc97f2 87 SUPERFAMILY SSF46689 2 69 3.14E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS00175 9805c6e0977d98d1dba14ec6daadd58f 458 Pfam PF01609 Transposase DDE domain 285 416 9.3E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00175 9805c6e0977d98d1dba14ec6daadd58f 458 Pfam PF05598 Transposase domain (DUF772) 59 133 2.7E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS04880 358f2b9ba231774c4ffb1fb195892e7a 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS04880 358f2b9ba231774c4ffb1fb195892e7a 338 SMART SM01126 154 299 2.4E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS04880 358f2b9ba231774c4ffb1fb195892e7a 338 Pfam PF12762 ISXO2-like transposase domain 154 299 8.0E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS11395 358f2b9ba231774c4ffb1fb195892e7a 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS11395 358f2b9ba231774c4ffb1fb195892e7a 338 SMART SM01126 154 299 2.4E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS11395 358f2b9ba231774c4ffb1fb195892e7a 338 Pfam PF12762 ISXO2-like transposase domain 154 299 8.0E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS09535 08637f8d2975c17a91e5a2bf959907b9 246 Pfam PF01351 Ribonuclease HII 38 216 2.9E-37 T 11-11-2016 IPR024567 Ribonuclease HII/HIII domain ATY42_RS09535 08637f8d2975c17a91e5a2bf959907b9 246 Hamap MF_00052_B Ribonuclease HII [rnhB]. 36 217 36.799 T 11-11-2016 IPR022898 Ribonuclease HII GO:0004523 ATY42_RS09535 08637f8d2975c17a91e5a2bf959907b9 246 Gene3D G3DSA:3.30.420.10 36 178 2.4E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09535 08637f8d2975c17a91e5a2bf959907b9 246 SUPERFAMILY SSF53098 33 224 5.61E-66 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07680 5505e87c07e9da3079ef9d06a1f22f8f 367 Pfam PF13437 HlyD family secretion protein 169 254 2.4E-8 T 11-11-2016 ATY42_RS07680 5505e87c07e9da3079ef9d06a1f22f8f 367 Pfam PF13533 Biotin-lipoyl like 66 104 1.2E-8 T 11-11-2016 ATY42_RS07680 5505e87c07e9da3079ef9d06a1f22f8f 367 Gene3D G3DSA:2.40.50.100 166 197 2.4E-10 T 11-11-2016 ATY42_RS07680 5505e87c07e9da3079ef9d06a1f22f8f 367 Gene3D G3DSA:2.40.50.100 60 91 2.4E-10 T 11-11-2016 ATY42_RS07680 5505e87c07e9da3079ef9d06a1f22f8f 367 SUPERFAMILY SSF111369 52 193 7.59E-9 T 11-11-2016 ATY42_RS07680 5505e87c07e9da3079ef9d06a1f22f8f 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 48 354 1.7E-61 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS22750 d23eee685cfbad6a5d1435e198e107d1 190 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 176 2.2E-50 T 11-11-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS22750 d23eee685cfbad6a5d1435e198e107d1 190 Pfam PF00849 RNA pseudouridylate synthase 2 149 2.0E-17 T 11-11-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS22750 d23eee685cfbad6a5d1435e198e107d1 190 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 11-11-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ATY42_RS22750 d23eee685cfbad6a5d1435e198e107d1 190 SUPERFAMILY SSF55120 2 178 7.36E-41 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS18380 288bfff5f6f1ab624b9d7ec7f48b6e37 187 SUPERFAMILY SSF52833 2 186 3.23E-51 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18380 288bfff5f6f1ab624b9d7ec7f48b6e37 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 3.8E-5 T 11-11-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATY42_RS18380 288bfff5f6f1ab624b9d7ec7f48b6e37 187 Pfam PF00578 AhpC/TSA family 4 132 6.1E-30 T 11-11-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATY42_RS18380 288bfff5f6f1ab624b9d7ec7f48b6e37 187 PIRSF PIRSF000239 1 187 6.0E-46 T 11-11-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ATY42_RS18380 288bfff5f6f1ab624b9d7ec7f48b6e37 187 Gene3D G3DSA:3.40.30.10 4 183 4.7E-58 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18380 288bfff5f6f1ab624b9d7ec7f48b6e37 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 3.1E-95 T 11-11-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ATY42_RS07410 3be8e09fc80da240f3ee8b1c08fe3362 161 Pfam PF04306 Protein of unknown function (DUF456) 23 158 8.0E-42 T 11-11-2016 IPR007403 Protein of unknown function DUF456 ATY42_RS22155 c60886e85dfd33d5738b25cc52d6f761 300 Pfam PF04366 Las17-binding protein actin regulator 100 211 4.0E-27 T 11-11-2016 IPR007461 Ysc84 actin-binding domain ATY42_RS08225 2c3a70d31d7f1633905b103e799835cf 149 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 138 1.0E-26 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ATY42_RS08225 2c3a70d31d7f1633905b103e799835cf 149 TIGRFAM TIGR02801 tolR: protein TolR 14 138 3.8E-40 T 11-11-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 ATY42_RS00445 6ff5f847eea0d134168bc49512b41e1e 209 TIGRFAM TIGR02560 HrpB4: type III secretion protein HrpB4 2 209 1.6E-73 T 11-11-2016 IPR013393 Type III secretion protein HrpB4 ATY42_RS00445 6ff5f847eea0d134168bc49512b41e1e 209 Pfam PF09502 Bacterial type III secretion protein (HrpB4) 5 203 4.5E-39 T 11-11-2016 IPR013393 Type III secretion protein HrpB4 ATY42_RS22845 1eb4109a167127e116a94a6fba423194 349 SUPERFAMILY SSF56935 31 349 5.49E-17 T 11-11-2016 ATY42_RS04040 837982390f323043585deaa3d84a42de 265 Gene3D G3DSA:3.40.30.10 126 255 2.5E-43 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS04040 837982390f323043585deaa3d84a42de 265 SUPERFAMILY SSF52833 114 255 6.92E-37 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS04040 837982390f323043585deaa3d84a42de 265 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 101 3.0E-16 T 11-11-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ATY42_RS04040 837982390f323043585deaa3d84a42de 265 Gene3D G3DSA:3.10.450.70 44 103 1.5E-18 T 11-11-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal ATY42_RS04040 837982390f323043585deaa3d84a42de 265 Pfam PF13098 Thioredoxin-like domain 132 253 2.8E-25 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS04040 837982390f323043585deaa3d84a42de 265 SUPERFAMILY SSF54423 55 102 9.94E-11 T 11-11-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal ATY42_RS17260 e782d79c99f08df5289ca586ce0f2d77 272 SUPERFAMILY SSF109604 3 259 1.46E-61 T 11-11-2016 ATY42_RS17260 e782d79c99f08df5289ca586ce0f2d77 272 Gene3D G3DSA:1.10.3150.10 2 246 1.0E-70 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD ATY42_RS17260 e782d79c99f08df5289ca586ce0f2d77 272 SMART SM00471 101 238 0.0035 T 11-11-2016 IPR003607 HD/PDEase domain ATY42_RS17260 e782d79c99f08df5289ca586ce0f2d77 272 Pfam PF08668 HDOD domain 13 202 9.7E-52 T 11-11-2016 IPR013976 Metal-dependent hydrolase HDOD ATY42_RS12445 30e079a158449ed2a4c18fe714bb7240 419 SUPERFAMILY SSF53098 4 383 9.1E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS12445 30e079a158449ed2a4c18fe714bb7240 419 Pfam PF13546 DDE superfamily endonuclease 1 271 2.0E-89 T 11-11-2016 ATY42_RS08160 4e21d62d495be851a480249052235b35 412 Gene3D G3DSA:1.20.1250.20 4 173 1.5E-9 T 11-11-2016 ATY42_RS08160 4e21d62d495be851a480249052235b35 412 SUPERFAMILY SSF103473 4 379 9.94E-35 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS08160 4e21d62d495be851a480249052235b35 412 Pfam PF07690 Major Facilitator Superfamily 201 381 6.4E-12 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS08160 4e21d62d495be851a480249052235b35 412 Gene3D G3DSA:1.20.1250.20 194 374 3.6E-16 T 11-11-2016 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 Pfam PF01578 Cytochrome C assembly protein 33 187 6.1E-29 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 48 228 2.1E-70 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 65 85 5.6E-47 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 159 185 5.6E-47 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 124 144 5.6E-47 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 48 65 5.6E-47 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 207 231 5.6E-47 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10475 694c5b891e266a60e17ea5a92316827f 250 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 103 123 5.6E-47 T 11-11-2016 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS12360 7330e07ff6379f8fb3b846df5a5a2ebe 373 SUPERFAMILY SSF50956 58 368 4.97E-34 T 11-11-2016 ATY42_RS12360 7330e07ff6379f8fb3b846df5a5a2ebe 373 Gene3D G3DSA:2.120.10.20 46 372 1.2E-64 T 11-11-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 ATY42_RS12360 7330e07ff6379f8fb3b846df5a5a2ebe 373 Pfam PF02333 Phytase 230 345 2.2E-6 T 11-11-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 ATY42_RS11715 d6b1bcb855279123bf5b8b7603b44183 651 Pfam PF05787 Bacterial protein of unknown function (DUF839) 201 556 1.0E-15 T 11-11-2016 IPR008557 Protein of unknown function DUF839 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 Pfam PF02107 Flagellar L-ring protein 48 228 3.1E-57 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 227 24.914 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 PRINTS PR01008 Flagellar L-ring protein signature 190 204 1.4E-22 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 PRINTS PR01008 Flagellar L-ring protein signature 143 158 1.4E-22 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 PRINTS PR01008 Flagellar L-ring protein signature 169 185 1.4E-22 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 PRINTS PR01008 Flagellar L-ring protein signature 70 82 1.4E-22 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS12770 fd619f6161bb733884dc545cd0d44969 230 PRINTS PR01008 Flagellar L-ring protein signature 206 220 1.4E-22 T 11-11-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 ATY42_RS01305 8d3a77a573e6abc8bf55f6f9e09c2833 332 Pfam PF03594 Benzoate membrane transport protein 24 308 6.8E-100 T 11-11-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ATY42_RS01305 8d3a77a573e6abc8bf55f6f9e09c2833 332 TIGRFAM TIGR00843 benE: benzoate transporter 26 307 5.2E-89 T 11-11-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 ATY42_RS20320 848c0dc5347abd431e0c94e30a6e31a4 118 Pfam PF08887 GAD-like domain 17 97 1.7E-13 T 11-11-2016 IPR014983 GAD-related ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 5.9E-16 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 5.9E-16 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 54 62 5.9E-16 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 TIGRFAM TIGR00077 lspA: signal peptidase II 10 162 7.9E-41 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 163 16.069 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS08005 5152d0220503deb8f2ae5e6ddc7bf043 166 Pfam PF01252 Signal peptidase (SPase) II 17 157 3.8E-35 T 11-11-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 ATY42_RS03425 c4f2e00c55c9d48e15c3e1d41d294b8b 161 SUPERFAMILY SSF89963 2 85 1.07E-28 T 11-11-2016 IPR007551 Protein of unknown function DUF520 ATY42_RS03425 c4f2e00c55c9d48e15c3e1d41d294b8b 161 SUPERFAMILY SSF89963 90 161 3.14E-26 T 11-11-2016 IPR007551 Protein of unknown function DUF520 ATY42_RS03425 c4f2e00c55c9d48e15c3e1d41d294b8b 161 Gene3D G3DSA:3.30.70.860 95 161 9.1E-31 T 11-11-2016 ATY42_RS03425 c4f2e00c55c9d48e15c3e1d41d294b8b 161 Gene3D G3DSA:3.30.70.990 9 94 2.1E-30 T 11-11-2016 ATY42_RS03425 c4f2e00c55c9d48e15c3e1d41d294b8b 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 6.9E-61 T 11-11-2016 IPR007551 Protein of unknown function DUF520 ATY42_RS03425 c4f2e00c55c9d48e15c3e1d41d294b8b 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.745 T 11-11-2016 IPR007551 Protein of unknown function DUF520 ATY42_RS00970 ec02c8aaa13e962ca5b12598f5bb6db4 563 Pfam PF11394 Protein of unknown function (DUF2875) 103 551 9.6E-170 T 11-11-2016 IPR021531 Protein of unknown function DUF2875 ATY42_RS00310 520017672b723aaa6bc27c653f1972d2 210 Gene3D G3DSA:3.40.50.720 1 209 3.4E-44 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00310 520017672b723aaa6bc27c653f1972d2 210 Pfam PF13460 NAD(P)H-binding 7 152 1.7E-8 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS00310 520017672b723aaa6bc27c653f1972d2 210 SUPERFAMILY SSF51735 1 200 4.67E-38 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS12230 9386a5729696d049f8a46ad2e9887d9a 289 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 19 284 8.6E-87 T 11-11-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ATY42_RS12230 9386a5729696d049f8a46ad2e9887d9a 289 Gene3D G3DSA:1.10.3720.10 23 283 1.1E-31 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS12230 9386a5729696d049f8a46ad2e9887d9a 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 280 7.8E-20 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS12230 9386a5729696d049f8a46ad2e9887d9a 289 SUPERFAMILY SSF161098 27 275 7.85E-30 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS06245 2bf0fded43620eb34a29a9b7264f256b 466 PIRSF PIRSF006446 1 457 3.2E-180 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ATY42_RS06245 2bf0fded43620eb34a29a9b7264f256b 466 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 435 5.3E-149 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ATY42_RS13355 12b6d7cad7bb91fa04af9b62bf5d220e 544 Gene3D G3DSA:2.160.20.10 65 474 7.1E-85 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS13355 12b6d7cad7bb91fa04af9b62bf5d220e 544 SUPERFAMILY SSF51126 73 251 1.28E-55 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS13355 12b6d7cad7bb91fa04af9b62bf5d220e 544 SUPERFAMILY SSF51126 281 475 1.28E-55 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS13355 12b6d7cad7bb91fa04af9b62bf5d220e 544 Pfam PF00295 Glycosyl hydrolases family 28 106 434 9.8E-42 T 11-11-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 Pfam PF00162 Phosphoglycerate kinase 6 378 7.8E-140 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-11-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 Gene3D G3DSA:3.40.50.1260 5 174 8.9E-62 T 11-11-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 Gene3D G3DSA:3.40.50.1270 175 376 9.8E-85 T 11-11-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 SUPERFAMILY SSF53748 3 387 8.6E-145 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 308 333 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 341 352 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 364 381 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.2E-81 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 388 38.403 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS17115 5abba52152017e4f34fea1388ba3a7d7 391 PIRSF PIRSF000724 1 391 5.0E-133 T 11-11-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS03805 0775dce5f84be4b034bf0ef2827307cf 437 Gene3D G3DSA:2.70.50.60 282 422 1.7E-29 T 11-11-2016 ATY42_RS03805 0775dce5f84be4b034bf0ef2827307cf 437 Pfam PF14524 Wzt C-terminal domain 285 421 7.7E-25 T 11-11-2016 IPR029439 Wzt, C-terminal ATY42_RS03805 0775dce5f84be4b034bf0ef2827307cf 437 SMART SM00382 53 224 7.2E-14 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS03805 0775dce5f84be4b034bf0ef2827307cf 437 SUPERFAMILY SSF52540 29 224 3.03E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS03805 0775dce5f84be4b034bf0ef2827307cf 437 Pfam PF00005 ABC transporter 44 176 1.1E-20 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS03805 0775dce5f84be4b034bf0ef2827307cf 437 Gene3D G3DSA:3.40.50.300 7 224 3.6E-44 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS18425 1ff1f18b72d651d5763c335ebc313b1c 171 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 36 159 1.3E-39 T 11-11-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 ATY42_RS18425 1ff1f18b72d651d5763c335ebc313b1c 171 Gene3D G3DSA:3.10.450.50 36 162 4.4E-33 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS18425 1ff1f18b72d651d5763c335ebc313b1c 171 SUPERFAMILY SSF54427 38 158 1.85E-31 T 11-11-2016 IPR032710 NTF2-like domain ATY42_RS18425 1ff1f18b72d651d5763c335ebc313b1c 171 PIRSF PIRSF028470 1 162 2.8E-71 T 11-11-2016 IPR016887 Uncharacterised conserved protein UCP028470, steroid isomerase-related ATY42_RS18425 1ff1f18b72d651d5763c335ebc313b1c 171 Pfam PF08332 Calcium/calmodulin dependent protein kinase II association domain 37 159 9.6E-46 T 11-11-2016 IPR013543 Calcium/calmodulin-dependent protein kinase II, association-domain GO:0004683|GO:0005516|GO:0006468 Reactome: R-HSA-3371571|Reactome: R-HSA-399719|Reactome: R-HSA-438066|Reactome: R-HSA-442729|Reactome: R-HSA-442742|Reactome: R-HSA-442982|Reactome: R-HSA-5576892|Reactome: R-HSA-5578775|Reactome: R-HSA-5673001|Reactome: R-HSA-877300|Reactome: R-HSA-936837 ATY42_RS17975 fe7638cdf8b399e6c2d55f46bd1df812 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 30.198 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17975 fe7638cdf8b399e6c2d55f46bd1df812 132 Pfam PF00410 Ribosomal protein S8 5 131 4.4E-46 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17975 fe7638cdf8b399e6c2d55f46bd1df812 132 Gene3D G3DSA:3.30.1370.30 2 73 2.6E-25 T 11-11-2016 ATY42_RS17975 fe7638cdf8b399e6c2d55f46bd1df812 132 Gene3D G3DSA:3.30.1490.10 76 131 7.7E-27 T 11-11-2016 ATY42_RS17975 fe7638cdf8b399e6c2d55f46bd1df812 132 SUPERFAMILY SSF56047 2 131 4.58E-43 T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17975 fe7638cdf8b399e6c2d55f46bd1df812 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-11-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS16335 f1aa1fe215f12874c8ab2f10d4cf629b 268 Gene3D G3DSA:3.20.20.70 1 266 4.6E-95 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS16335 f1aa1fe215f12874c8ab2f10d4cf629b 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 259 8.1E-71 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16335 f1aa1fe215f12874c8ab2f10d4cf629b 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 264 34.395 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16335 f1aa1fe215f12874c8ab2f10d4cf629b 268 SUPERFAMILY SSF51366 1 244 2.07E-83 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS16335 f1aa1fe215f12874c8ab2f10d4cf629b 268 Pfam PF00290 Tryptophan synthase alpha chain 8 261 2.4E-83 T 11-11-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16335 f1aa1fe215f12874c8ab2f10d4cf629b 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-11-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ATY42_RS16660 9805c738a986c3ab000dfb496cc5dc93 138 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 23 120 2.1E-37 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ATY42_RS16660 9805c738a986c3ab000dfb496cc5dc93 138 SUPERFAMILY SSF81301 21 126 1.26E-38 T 11-11-2016 ATY42_RS16660 9805c738a986c3ab000dfb496cc5dc93 138 Pfam PF02410 Ribosomal silencing factor during starvation 26 120 5.9E-29 T 11-11-2016 ATY42_RS16660 9805c738a986c3ab000dfb496cc5dc93 138 Gene3D G3DSA:3.30.460.10 22 121 1.1E-37 T 11-11-2016 ATY42_RS16660 9805c738a986c3ab000dfb496cc5dc93 138 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 19 121 25.038 T 11-11-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ATY42_RS06400 b4627e3a45687b904efa4b094007c071 90 Gene3D G3DSA:1.10.3470.10 13 83 1.6E-4 T 11-11-2016 IPR029022 ABC transporter, BtuC-like ATY42_RS06400 b4627e3a45687b904efa4b094007c071 90 Pfam PF04226 Transglycosylase associated protein 40 86 7.8E-11 T 11-11-2016 IPR007341 Transglycosylase-associated protein GO:0016021 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PIRSF PIRSF002764 7 231 4.5E-77 T 11-11-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 87 110 7.0E-48 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 64 81 7.0E-48 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 167 186 7.0E-48 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 38 59 7.0E-48 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 112 130 7.0E-48 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 204 227 7.0E-48 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 17 227 7.0E-58 T 11-11-2016 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria ATY42_RS10480 8efce18999686c5bbc8495bf0729f8ea 231 Pfam PF03379 CcmB protein 16 228 5.3E-62 T 11-11-2016 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 ATY42_RS00185 2fccd1bf897fa987af1965c8f5fd7f68 87 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 20 83 8.5E-14 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS00185 2fccd1bf897fa987af1965c8f5fd7f68 87 SUPERFAMILY SSF52777 4 84 3.02E-16 T 11-11-2016 ATY42_RS00185 2fccd1bf897fa987af1965c8f5fd7f68 87 Gene3D G3DSA:3.30.559.10 21 84 2.3E-13 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 ATY42_RS00400 e9e2b93ac8071e87ab911d79c0400716 255 Pfam PF13358 DDE superfamily endonuclease 111 232 5.8E-28 T 11-11-2016 ATY42_RS00400 e9e2b93ac8071e87ab911d79c0400716 255 Pfam PF13592 Winged helix-turn helix 36 93 5.9E-18 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS07925 30f31f9707e7bc79fed6b63669c6f8bf 158 Pfam PF01609 Transposase DDE domain 1 155 3.0E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10995 0040dccb4ea94725287ca5ba17551486 208 Gene3D G3DSA:1.10.10.10 131 204 2.1E-18 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10995 0040dccb4ea94725287ca5ba17551486 208 Pfam PF13545 Crp-like helix-turn-helix domain 131 201 9.9E-18 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS10995 0040dccb4ea94725287ca5ba17551486 208 SMART SM00419 147 196 6.4E-15 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS10995 0040dccb4ea94725287ca5ba17551486 208 SUPERFAMILY SSF46785 131 205 3.47E-14 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10995 0040dccb4ea94725287ca5ba17551486 208 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 169 184 4.3E-9 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS10995 0040dccb4ea94725287ca5ba17551486 208 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 153 169 4.3E-9 T 11-11-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 Pfam PF11867 Domain of unknown function (DUF3387) 716 1054 3.6E-122 T 11-11-2016 IPR021810 Protein of unknown function DUF3387 ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 SUPERFAMILY SSF52540 225 504 6.31E-22 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 211 1.0E-40 T 11-11-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 7 717 2.9E-171 T 11-11-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 Pfam PF04851 Type III restriction enzyme, res subunit 288 464 1.1E-13 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 SMART SM00487 263 497 3.0E-4 T 11-11-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain ATY42_RS17350 8b852a5c876431a608dd6734cbaf31a5 1059 Gene3D G3DSA:3.40.50.300 270 469 1.1E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS20555 4e147c0e51f7491e67183bb4534c58c1 421 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 6 379 1.4E-47 T 11-11-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 ATY42_RS20555 4e147c0e51f7491e67183bb4534c58c1 421 Pfam PF07219 HemY protein N-terminus 33 132 9.4E-18 T 11-11-2016 IPR010817 HemY, N-terminal ATY42_RS20555 4e147c0e51f7491e67183bb4534c58c1 421 Gene3D G3DSA:1.25.40.10 154 383 9.4E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS20555 4e147c0e51f7491e67183bb4534c58c1 421 SUPERFAMILY SSF48452 273 383 2.06E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS13150 470e996fe8d3061f3eb87a837534fb05 366 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 319 4.1E-123 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ATY42_RS15320 4b469c7f81e68d5f46bcfe365d6de549 504 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 75 499 2.2E-188 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ATY42_RS15320 4b469c7f81e68d5f46bcfe365d6de549 504 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 26 499 1.0E-213 T 11-11-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath ATY42_RS05660 aaddee983b4e76e26fb2d17fd57bf3c3 177 Pfam PF04351 Pilus assembly protein, PilP 34 174 2.2E-46 T 11-11-2016 IPR007446 Pilus assembly protein PilP ATY42_RS05660 aaddee983b4e76e26fb2d17fd57bf3c3 177 PIRSF PIRSF016481 3 177 5.3E-59 T 11-11-2016 IPR007446 Pilus assembly protein PilP ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 Gene3D G3DSA:2.170.130.10 65 169 3.5E-5 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 Gene3D G3DSA:2.40.170.20 176 500 2.9E-44 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 Gene3D G3DSA:2.40.170.20 542 583 2.9E-44 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 Gene3D G3DSA:2.40.170.20 627 910 2.9E-44 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 SUPERFAMILY SSF56935 640 687 5.13E-56 T 11-11-2016 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 SUPERFAMILY SSF56935 539 580 5.13E-56 T 11-11-2016 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 SUPERFAMILY SSF56935 714 911 5.13E-56 T 11-11-2016 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 SUPERFAMILY SSF56935 43 510 5.13E-56 T 11-11-2016 ATY42_RS10545 75222e435635ed65b032a4b7f26109dd 913 Pfam PF07715 TonB-dependent Receptor Plug Domain 66 172 4.0E-5 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS16910 af97b8ea8ddd1f8e29a3e07f9bea36c7 213 Pfam PF01609 Transposase DDE domain 37 171 8.7E-10 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS02180 2c8b405e6fc6ee709b0041f11f2644af 599 Pfam PF00723 Glycosyl hydrolases family 15 224 533 3.7E-50 T 11-11-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 ATY42_RS02180 2c8b405e6fc6ee709b0041f11f2644af 599 Gene3D G3DSA:1.50.10.10 216 593 2.5E-83 T 11-11-2016 IPR012341 Six-hairpin glycosidase GO:0003824 ATY42_RS02180 2c8b405e6fc6ee709b0041f11f2644af 599 SUPERFAMILY SSF48208 190 590 5.44E-103 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS14710 1d8b16f4a0d1dcebfcf07fbbeb13e175 558 SUPERFAMILY SSF56112 100 163 8.25E-29 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS14710 1d8b16f4a0d1dcebfcf07fbbeb13e175 558 SUPERFAMILY SSF56112 204 435 8.25E-29 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS14710 1d8b16f4a0d1dcebfcf07fbbeb13e175 558 Gene3D G3DSA:3.90.1200.10 265 357 6.2E-9 T 11-11-2016 ATY42_RS14710 1d8b16f4a0d1dcebfcf07fbbeb13e175 558 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 12 446 4.4E-164 T 11-11-2016 IPR010232 Probable protein kinase UbiB GO:0006744 ATY42_RS14710 1d8b16f4a0d1dcebfcf07fbbeb13e175 558 Pfam PF03109 ABC1 family 118 236 8.2E-33 T 11-11-2016 IPR004147 UbiB domain ATY42_RS05975 f98f5ec772f92fa6d72960fc4e4ad053 171 Gene3D G3DSA:3.40.640.10 61 158 1.0E-10 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS05975 f98f5ec772f92fa6d72960fc4e4ad053 171 SUPERFAMILY SSF53383 50 161 4.1E-14 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS05975 f98f5ec772f92fa6d72960fc4e4ad053 171 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 32 0.0014 T 11-11-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ATY42_RS14465 4b09ce02cdac60a1c1c9b6c934b9a909 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 4.4E-10 T 11-11-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ATY42_RS14465 4b09ce02cdac60a1c1c9b6c934b9a909 129 Gene3D G3DSA:3.10.180.10 2 126 4.4E-31 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS14465 4b09ce02cdac60a1c1c9b6c934b9a909 129 SUPERFAMILY SSF54593 3 128 8.19E-25 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 SUPERFAMILY SSF52833 9 95 1.45E-26 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 PRINTS PR00160 Glutaredoxin signature 16 34 2.9E-11 T 11-11-2016 IPR014025 Glutaredoxin subgroup ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 PRINTS PR00160 Glutaredoxin signature 58 71 2.9E-11 T 11-11-2016 IPR014025 Glutaredoxin subgroup ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 PRINTS PR00160 Glutaredoxin signature 72 85 2.9E-11 T 11-11-2016 IPR014025 Glutaredoxin subgroup ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 ProSitePatterns PS00195 Glutaredoxin active site. 18 34 - T 11-11-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 16 94 1.7E-33 T 11-11-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 Gene3D G3DSA:3.40.30.10 14 95 1.2E-24 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS18455 645dd9482d86f1040645452b406b8d3e 102 Pfam PF00462 Glutaredoxin 16 75 6.5E-17 T 11-11-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ATY42_RS21440 5e9938bb673c4081d557414bd9ab3f3d 232 SMART SM00944 90 208 3.1E-21 T 11-11-2016 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 ATY42_RS21440 5e9938bb673c4081d557414bd9ab3f3d 232 SUPERFAMILY SSF54897 101 190 9.01E-17 T 11-11-2016 IPR009020 Proteinase propeptide inhibitor ATY42_RS21440 5e9938bb673c4081d557414bd9ab3f3d 232 Pfam PF09286 Pro-kumamolisin, activation domain 102 187 7.0E-14 T 11-11-2016 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 297 318 5.1E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 267 282 5.1E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 6 28 5.1E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 223 240 5.1E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 203 221 5.1E-39 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 TIGRFAM TIGR01404 FlhB_rel_III: type III secretion protein, YscU/HrpY family 3 342 1.3E-102 T 11-11-2016 IPR006307 Type III exporter system, secretion apparatus protein BsaZ GO:0009306|GO:0016021 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 Gene3D G3DSA:3.40.1690.10 213 346 1.1E-50 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 3 341 1.6E-107 T 11-11-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ATY42_RS00465 0b52e78e1fff1dab2538f00848b0bddf 359 SUPERFAMILY SSF160544 239 343 5.36E-32 T 11-11-2016 IPR029025 Type III secretion system substrate exporter, C-terminal ATY42_RS19450 682bce4adf4653bc7664b15ce370b071 185 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 130 182 8.0E-24 T 11-11-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB ATY42_RS19450 682bce4adf4653bc7664b15ce370b071 185 Pfam PF11776 Nickel/cobalt transporter regulator 134 180 8.1E-17 T 11-11-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB ATY42_RS01345 38fdf8c3d4d96889059955706d44ffbd 113 Pfam PF12760 Transposase zinc-ribbon domain 36 80 2.0E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS14715 a6fa9034c04f07e674e1d7a3bd3686ee 164 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 160 2.2E-48 T 11-11-2016 IPR008136 CinA, C-terminal ATY42_RS14715 a6fa9034c04f07e674e1d7a3bd3686ee 164 Gene3D G3DSA:3.90.950.20 6 162 1.4E-54 T 11-11-2016 IPR008136 CinA, C-terminal ATY42_RS14715 a6fa9034c04f07e674e1d7a3bd3686ee 164 Pfam PF02464 Competence-damaged protein 10 162 5.4E-57 T 11-11-2016 IPR008136 CinA, C-terminal ATY42_RS14715 a6fa9034c04f07e674e1d7a3bd3686ee 164 SUPERFAMILY SSF142433 7 162 4.45E-54 T 11-11-2016 IPR008136 CinA, C-terminal ATY42_RS12115 852cba739b429f2e76fdf21038b33da5 307 SUPERFAMILY SSF52540 8 234 8.21E-32 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12115 852cba739b429f2e76fdf21038b33da5 307 SMART SM00382 30 215 1.8E-6 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS12115 852cba739b429f2e76fdf21038b33da5 307 Pfam PF00005 ABC transporter 34 171 1.6E-14 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS12115 852cba739b429f2e76fdf21038b33da5 307 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS12115 852cba739b429f2e76fdf21038b33da5 307 Gene3D G3DSA:3.40.50.300 6 244 4.6E-30 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05255 16fb212f845ccc0950fd3e554f1ad908 403 Pfam PF13546 DDE superfamily endonuclease 1 255 6.3E-85 T 11-11-2016 ATY42_RS05255 16fb212f845ccc0950fd3e554f1ad908 403 SUPERFAMILY SSF53098 20 367 4.63E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01445 4a324791e605c65e0ec41d98ed3ffb99 158 Pfam PF01609 Transposase DDE domain 1 155 2.9E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11205 8f508a5fbad1ffba941dd5b1747079f1 128 Pfam PF13586 Transposase DDE domain 42 123 3.5E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS05525 8f508a5fbad1ffba941dd5b1747079f1 128 Pfam PF13586 Transposase DDE domain 42 123 3.5E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS16290 8f508a5fbad1ffba941dd5b1747079f1 128 Pfam PF13586 Transposase DDE domain 42 123 3.5E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS01685 0836ba4e76a67cc6ed18f4c74746c706 338 SMART SM01126 154 299 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01685 0836ba4e76a67cc6ed18f4c74746c706 338 Pfam PF12762 ISXO2-like transposase domain 154 299 3.4E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01685 0836ba4e76a67cc6ed18f4c74746c706 338 Pfam PF12760 Transposase zinc-ribbon domain 42 86 1.5E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS00770 e93cf6136bfdbdf790c0bc5c48659842 126 Gene3D G3DSA:3.30.10.10 70 122 3.7E-4 T 11-11-2016 ATY42_RS00770 e93cf6136bfdbdf790c0bc5c48659842 126 Pfam PF11720 Peptidase inhibitor I78 family 62 126 2.7E-23 T 11-11-2016 IPR021719 Proteinase inhibitor I78 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 Pfam PF13244 Domain of unknown function (DUF4040) 611 675 2.2E-17 T 11-11-2016 IPR025383 Domain of unknown function DUF4040 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 417 436 5.9E-39 T 11-11-2016 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 Pfam PF00361 Proton-conducting membrane transporter 128 415 2.8E-66 T 11-11-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 788 907 9.2E-30 T 11-11-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein ATY42_RS20440 8fed62257899cdfd5315667c27339e77 942 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 115 2.6E-10 T 11-11-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS20295 b4a86c7b8284cf8a5b440be9cc00e381 236 SUPERFAMILY SSF46689 25 125 1.04E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20295 b4a86c7b8284cf8a5b440be9cc00e381 236 Pfam PF13518 Helix-turn-helix domain 26 79 1.1E-13 T 11-11-2016 ATY42_RS20295 b4a86c7b8284cf8a5b440be9cc00e381 236 Gene3D G3DSA:1.10.10.10 24 71 5.9E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR01900 YidC translocation/secretion protein signature 498 513 1.7E-16 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR01900 YidC translocation/secretion protein signature 518 542 1.7E-16 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR01900 YidC translocation/secretion protein signature 369 385 1.7E-16 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 Pfam PF02096 60Kd inner membrane protein 384 562 1.2E-55 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 4 381 8.1E-68 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 565 22.015 T 11-11-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 383 562 3.1E-64 T 11-11-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 Pfam PF14849 YidC periplasmic domain 95 373 4.4E-64 T 11-11-2016 IPR028053 Membrane insertase YidC, N-terminal ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 244 262 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 278 293 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 492 514 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 445 468 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 529 552 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS23290 c864a3d013c1e3a9650900c4fdf14663 578 PRINTS PR00701 60kDa inner membrane protein signature 188 208 2.6E-49 T 11-11-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 ATY42_RS14970 8607cd1024b77deb8e51cf1162593684 370 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 362 8.3E-117 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATY42_RS14970 8607cd1024b77deb8e51cf1162593684 370 Gene3D G3DSA:3.90.1150.10 250 367 2.2E-37 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS14970 8607cd1024b77deb8e51cf1162593684 370 Gene3D G3DSA:3.40.640.10 15 247 2.1E-76 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS14970 8607cd1024b77deb8e51cf1162593684 370 PIRSF PIRSF000390 5 368 3.8E-98 T 11-11-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ATY42_RS14970 8607cd1024b77deb8e51cf1162593684 370 SUPERFAMILY SSF53383 15 366 7.15E-101 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS18820 a69ca00aab0cedd339d2b42cdedd85a6 176 SUPERFAMILY SSF46689 20 138 1.36E-17 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS18820 a69ca00aab0cedd339d2b42cdedd85a6 176 Pfam PF13592 Winged helix-turn helix 104 162 1.6E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS18820 a69ca00aab0cedd339d2b42cdedd85a6 176 Pfam PF13551 Winged helix-turn helix 27 86 3.4E-15 T 11-11-2016 ATY42_RS16515 1cfb83a9d4773a93ac4aaad9dec9cb4d 159 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 135 4.0E-10 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ATY42_RS16515 1cfb83a9d4773a93ac4aaad9dec9cb4d 159 SUPERFAMILY SSF54534 2 139 4.91E-33 T 11-11-2016 ATY42_RS16515 1cfb83a9d4773a93ac4aaad9dec9cb4d 159 Gene3D G3DSA:3.10.50.40 2 69 3.1E-19 T 11-11-2016 ATY42_RS16515 1cfb83a9d4773a93ac4aaad9dec9cb4d 159 Gene3D G3DSA:3.10.50.40 121 141 3.1E-19 T 11-11-2016 ATY42_RS01235 8ecc029472c9371308bbc3ef0d66ed77 350 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 160 169 - T 11-11-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 ATY42_RS01235 8ecc029472c9371308bbc3ef0d66ed77 350 SUPERFAMILY SSF51445 36 340 1.33E-76 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS01235 8ecc029472c9371308bbc3ef0d66ed77 350 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 62 314 1.2E-50 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 ATY42_RS01235 8ecc029472c9371308bbc3ef0d66ed77 350 Gene3D G3DSA:3.20.20.80 36 344 2.2E-92 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS04370 29da95f173dd5b3c65203c83d5bfd7c2 186 Pfam PF00210 Ferritin-like domain 48 179 2.1E-24 T 11-11-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ATY42_RS04370 29da95f173dd5b3c65203c83d5bfd7c2 186 PIRSF PIRSF018063 19 186 2.3E-59 T 11-11-2016 IPR014490 Uncharacterised conserved protein UCP018063, ferritin fold ATY42_RS04370 29da95f173dd5b3c65203c83d5bfd7c2 186 Gene3D G3DSA:1.20.1260.10 36 180 1.1E-45 T 11-11-2016 IPR012347 Ferritin-related ATY42_RS04370 29da95f173dd5b3c65203c83d5bfd7c2 186 SUPERFAMILY SSF47240 38 179 1.52E-33 T 11-11-2016 IPR009078 Ferritin-like superfamily ATY42_RS03740 221b68951c20ffc12aa28938f57f2adc 296 Gene3D G3DSA:3.30.1330.60 215 280 1.6E-4 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS03740 221b68951c20ffc12aa28938f57f2adc 296 SUPERFAMILY SSF103088 215 280 2.49E-6 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS18320 c7a216a2dce6ce525131d8a848ac8bdb 779 Pfam PF07793 Protein of unknown function (DUF1631) 11 770 2.9E-204 T 11-11-2016 IPR012434 Protein of unknown function DUF1631 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 16 586 3.4E-238 T 11-11-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 SMART SM00382 372 559 1.6E-18 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 SUPERFAMILY SSF52540 335 584 1.07E-87 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 SUPERFAMILY SSF90123 18 332 3.14E-65 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 Pfam PF00005 ABC transporter 363 513 2.5E-32 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 Gene3D G3DSA:1.20.1560.10 18 333 1.3E-64 T 11-11-2016 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 Pfam PF00664 ABC transporter transmembrane region 32 298 1.7E-39 T 11-11-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 ATY42_RS11375 36c1d80913a2f8f01f3f05df2c5efc37 589 Gene3D G3DSA:3.40.50.300 344 577 1.4E-81 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS09760 b6c7328113d52a80a4884a12050d465b 271 SMART SM01126 148 270 3.5E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS09760 b6c7328113d52a80a4884a12050d465b 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS09760 b6c7328113d52a80a4884a12050d465b 271 Pfam PF12762 ISXO2-like transposase domain 148 270 3.3E-21 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02705 6bca9aa654ba61d4848cd1a8c45b604f 171 Pfam PF01548 Transposase 9 101 3.1E-19 T 11-11-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 ATY42_RS06145 583361b0279b87508726a4a9ddbd54ce 388 SUPERFAMILY SSF52440 175 280 6.33E-36 T 11-11-2016 IPR016185 Pre-ATP-grasp domain ATY42_RS06145 583361b0279b87508726a4a9ddbd54ce 388 SUPERFAMILY SSF56059 1 169 2.15E-81 T 11-11-2016 ATY42_RS06145 583361b0279b87508726a4a9ddbd54ce 388 SUPERFAMILY SSF56059 268 385 2.15E-81 T 11-11-2016 ATY42_RS06145 583361b0279b87508726a4a9ddbd54ce 388 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 386 1.5E-145 T 11-11-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ATY42_RS18930 32f2c86bdb1eafe033ed2ec7164f1e93 167 SUPERFAMILY SSF52266 33 163 2.44E-27 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS18930 32f2c86bdb1eafe033ed2ec7164f1e93 167 Gene3D G3DSA:3.40.50.1110 36 160 1.6E-24 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS18930 32f2c86bdb1eafe033ed2ec7164f1e93 167 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 72 156 7.0E-7 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS15600 f56ac72c9ecbe50aa5428f0c8e3e9687 146 Pfam PF01609 Transposase DDE domain 69 132 8.0E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15600 f56ac72c9ecbe50aa5428f0c8e3e9687 146 SUPERFAMILY SSF53098 12 145 6.83E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09520 307eee3fc44bac8c0532f5630ba1ae42 134 Pfam PF05598 Transposase domain (DUF772) 14 79 1.4E-5 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS08965 1ed9f10efd718802830ed12fa94939a1 299 SUPERFAMILY SSF89069 17 84 2.09E-14 T 11-11-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 ATY42_RS08965 1ed9f10efd718802830ed12fa94939a1 299 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 18 93 1.6E-15 T 11-11-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 ATY42_RS03040 8e08608e77ba57e5c1051d824e437752 224 Gene3D G3DSA:3.30.1330.60 81 200 9.4E-33 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS03040 8e08608e77ba57e5c1051d824e437752 224 Pfam PF00691 OmpA family 92 196 1.3E-19 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS03040 8e08608e77ba57e5c1051d824e437752 224 SUPERFAMILY SSF103088 82 200 4.58E-29 T 11-11-2016 IPR006665 OmpA-like domain ATY42_RS09380 d2f7479cd6406286e1c9ad81472cf216 149 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 29 148 1.2E-33 T 11-11-2016 IPR019223 Domain of unknown function DUF2147 ATY42_RS16270 ea440e43ebd654e54045e8fcd4e1959e 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 11-11-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS16270 ea440e43ebd654e54045e8fcd4e1959e 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 248 40.913 T 11-11-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS16270 ea440e43ebd654e54045e8fcd4e1959e 251 SUPERFAMILY SSF51351 1 247 9.29E-88 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS16270 ea440e43ebd654e54045e8fcd4e1959e 251 Pfam PF00121 Triosephosphate isomerase 4 244 3.5E-88 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS16270 ea440e43ebd654e54045e8fcd4e1959e 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 239 8.2E-66 T 11-11-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ATY42_RS16270 ea440e43ebd654e54045e8fcd4e1959e 251 Gene3D G3DSA:3.20.20.70 1 249 5.9E-98 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS04840 6cb3eac711c1055a2fdc45b48b4129a5 153 Pfam PF07486 Cell Wall Hydrolase 35 142 1.6E-17 T 11-11-2016 IPR011105 Cell wall hydrolase, SleB GO:0016787 ATY42_RS21890 53662af7edb11b278a41f7e35fbd841f 332 SMART SM01126 148 293 3.9E-47 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21890 53662af7edb11b278a41f7e35fbd841f 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.6E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS21890 53662af7edb11b278a41f7e35fbd841f 332 Pfam PF12762 ISXO2-like transposase domain 148 293 3.3E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS07195 c3e590360ddfd9065a67671b73939bc4 802 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 130 295 9.1E-14 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS07195 c3e590360ddfd9065a67671b73939bc4 802 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 306 419 1.1E-14 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS15620 1284e8face19d0db69ab096b8e6b0f63 791 SUPERFAMILY SSF48208 103 145 2.21E-12 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS15620 1284e8face19d0db69ab096b8e6b0f63 791 SUPERFAMILY SSF48208 189 409 2.21E-12 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS15620 1284e8face19d0db69ab096b8e6b0f63 791 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 56 570 1.8E-164 T 11-11-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 ATY42_RS15305 179dc2ca3cfae23b6f7051aff902faae 167 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 11 161 3.1E-22 T 11-11-2016 IPR017737 Type VI secretion system, lysozyme-related protein ATY42_RS15305 179dc2ca3cfae23b6f7051aff902faae 167 Pfam PF04965 Gene 25-like lysozyme 39 142 1.6E-18 T 11-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD ATY42_RS15305 179dc2ca3cfae23b6f7051aff902faae 167 SUPERFAMILY SSF160719 39 153 2.35E-9 T 11-11-2016 ATY42_RS12845 1bea45489a5e8f97cb1205b7abd090db 74 Gene3D G3DSA:1.10.1200.10 11 71 1.3E-4 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS12845 1bea45489a5e8f97cb1205b7abd090db 74 SUPERFAMILY SSF47336 5 71 1.5E-7 T 11-11-2016 IPR009081 Phosphopantetheine binding ACP domain ATY42_RS09585 233f4c9a3d6ea89525208278a63224dd 185 SUPERFAMILY SSF55194 1 185 4.45E-68 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ATY42_RS09585 233f4c9a3d6ea89525208278a63224dd 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.906 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ATY42_RS09585 233f4c9a3d6ea89525208278a63224dd 185 Gene3D G3DSA:1.10.132.20 66 185 1.3E-43 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ATY42_RS09585 233f4c9a3d6ea89525208278a63224dd 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.7E-70 T 11-11-2016 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ATY42_RS09585 233f4c9a3d6ea89525208278a63224dd 185 Pfam PF01765 Ribosome recycling factor 20 183 9.0E-62 T 11-11-2016 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ATY42_RS15155 cac60d5929622e7b484f2b9d2e8ae16d 365 Pfam PF01609 Transposase DDE domain 172 348 1.9E-6 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15155 cac60d5929622e7b484f2b9d2e8ae16d 365 Pfam PF05598 Transposase domain (DUF772) 56 130 4.4E-22 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS04230 e894c914a0c92564abf0e49edfb2c061 64 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.0E-19 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS04230 e894c914a0c92564abf0e49edfb2c061 64 SUPERFAMILY SSF57829 2 54 4.46E-18 T 11-11-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 ATY42_RS04230 e894c914a0c92564abf0e49edfb2c061 64 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.784 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS04230 e894c914a0c92564abf0e49edfb2c061 64 Pfam PF01783 Ribosomal L32p protein family 2 55 1.3E-20 T 11-11-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ATY42_RS18435 f29684792d742f169070cbc6fed10360 182 Pfam PF01609 Transposase DDE domain 71 132 2.2E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS18435 f29684792d742f169070cbc6fed10360 182 SUPERFAMILY SSF53098 12 146 3.49E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10360 5f7c8718a6320205cef71e70e683ce75 491 Pfam PF05598 Transposase domain (DUF772) 75 149 1.1E-13 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10990 bd496ad7b468a78eeea27816b1cf74e9 247 Pfam PF13645 L,D-transpeptidase catalytic domain 50 219 9.9E-66 T 11-11-2016 IPR032676 Putative L,D-transpeptidase catalytic domain ATY42_RS03760 cd08f83fd0052d0038957077899e6930 266 Gene3D G3DSA:3.40.50.150 51 232 3.5E-32 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS03760 cd08f83fd0052d0038957077899e6930 266 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 71 202 1.3E-24 T 11-11-2016 IPR006342 Methyltransferase FkbM ATY42_RS03760 cd08f83fd0052d0038957077899e6930 266 SUPERFAMILY SSF53335 64 233 6.52E-38 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS03760 cd08f83fd0052d0038957077899e6930 266 Pfam PF05050 Methyltransferase FkbM domain 73 229 2.8E-9 T 11-11-2016 IPR006342 Methyltransferase FkbM ATY42_RS03195 3636fbbc6469f545a9e29c63160d774a 272 PIRSF PIRSF006157 1 262 7.0E-87 T 11-11-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 ATY42_RS03195 3636fbbc6469f545a9e29c63160d774a 272 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 240 1.7E-45 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ATY42_RS03195 3636fbbc6469f545a9e29c63160d774a 272 Gene3D G3DSA:3.40.830.10 1 261 1.8E-96 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ATY42_RS03195 3636fbbc6469f545a9e29c63160d774a 272 SUPERFAMILY SSF53213 3 261 3.92E-88 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ATY42_RS10550 9e31e1238d05d15b4df51acd93fe5da7 539 PIRSF PIRSF028431 13 506 2.5E-219 T 11-11-2016 IPR016883 Uncharacterised conserved protein UCP028431 ATY42_RS10550 9e31e1238d05d15b4df51acd93fe5da7 539 Pfam PF10091 Putative glucoamylase 231 478 3.6E-90 T 11-11-2016 IPR019282 Domain of unknown function DUF2329 ATY42_RS19375 67d2b37b9d468f349e013f9e14715809 109 SUPERFAMILY SSF49785 34 89 2.98E-7 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS19375 67d2b37b9d468f349e013f9e14715809 109 Gene3D G3DSA:2.60.120.260 41 92 2.4E-6 T 11-11-2016 IPR008979 Galactose-binding domain-like ATY42_RS19375 67d2b37b9d468f349e013f9e14715809 109 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 38 91 1.7E-5 T 11-11-2016 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 ATY42_RS09415 5838f5842efc4d9e9bfa874b43c5154b 258 Pfam PF02592 Putative vitamin uptake transporter 62 234 9.9E-42 T 11-11-2016 IPR003744 Protein of unknown function DUF165 ATY42_RS09415 5838f5842efc4d9e9bfa874b43c5154b 258 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 58 236 5.2E-34 T 11-11-2016 IPR003744 Protein of unknown function DUF165 ATY42_RS07095 f2f06208fb41cc5ba83ed7c37d314ff6 80 Pfam PF13602 Zinc-binding dehydrogenase 18 78 5.1E-7 T 11-11-2016 ATY42_RS04460 e186da8b2919b42866e4f5928a0a62c6 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 6 305 42.007 T 11-11-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 ATY42_RS04460 e186da8b2919b42866e4f5928a0a62c6 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 10 296 2.8E-71 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ATY42_RS04460 e186da8b2919b42866e4f5928a0a62c6 306 PIRSF PIRSF026649 5 305 2.6E-91 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ATY42_RS04460 e186da8b2919b42866e4f5928a0a62c6 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 8 305 5.2E-123 T 11-11-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 ATY42_RS04805 ee42f539961cb7654620580b2abdb4ee 525 Gene3D G3DSA:2.160.20.10 58 228 1.3E-27 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS04805 ee42f539961cb7654620580b2abdb4ee 525 Gene3D G3DSA:2.160.20.10 283 524 1.3E-27 T 11-11-2016 IPR012334 Pectin lyase fold ATY42_RS04805 ee42f539961cb7654620580b2abdb4ee 525 SUPERFAMILY SSF51126 337 524 9.87E-7 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS04805 ee42f539961cb7654620580b2abdb4ee 525 SUPERFAMILY SSF51126 66 229 2.48E-18 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS04805 ee42f539961cb7654620580b2abdb4ee 525 SUPERFAMILY SSF51126 262 384 2.48E-18 T 11-11-2016 IPR011050 Pectin lyase fold/virulence factor ATY42_RS05050 7f50b4d820c05c85bb7fd55dbd8e5399 565 Pfam PF11394 Protein of unknown function (DUF2875) 104 553 9.8E-172 T 11-11-2016 IPR021531 Protein of unknown function DUF2875 ATY42_RS12585 73f63c841e01c2db4df1cd8311b03ab6 443 Pfam PF00654 Voltage gated chloride channel 62 392 2.9E-63 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS12585 73f63c841e01c2db4df1cd8311b03ab6 443 PRINTS PR00762 Chloride channel signature 153 172 8.3E-5 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS12585 73f63c841e01c2db4df1cd8311b03ab6 443 PRINTS PR00762 Chloride channel signature 102 121 8.3E-5 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS12585 73f63c841e01c2db4df1cd8311b03ab6 443 SUPERFAMILY SSF81340 3 407 4.45E-85 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS12585 73f63c841e01c2db4df1cd8311b03ab6 443 Gene3D G3DSA:1.10.3080.10 10 401 5.3E-53 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS04730 cf9b2666fc94fbd26772cca214f35274 296 Gene3D G3DSA:2.40.10.10 216 261 2.0E-7 T 11-11-2016 ATY42_RS04730 cf9b2666fc94fbd26772cca214f35274 296 Pfam PF00089 Trypsin 210 258 7.9E-5 T 11-11-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 ATY42_RS04730 cf9b2666fc94fbd26772cca214f35274 296 Gene3D G3DSA:2.40.10.10 44 123 4.5E-6 T 11-11-2016 ATY42_RS04730 cf9b2666fc94fbd26772cca214f35274 296 SUPERFAMILY SSF50494 162 262 2.66E-11 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS04730 cf9b2666fc94fbd26772cca214f35274 296 SUPERFAMILY SSF50494 75 123 2.66E-11 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS00455 44a198f5e3b8d93b6ed810f74a4cf1b8 130 TIGRFAM TIGR02558 HrpB2: type III secretion protein HrpB2 11 130 2.9E-43 T 11-11-2016 IPR013391 Type III secretion protein HrpB2 ATY42_RS00455 44a198f5e3b8d93b6ed810f74a4cf1b8 130 Pfam PF09487 Bacterial type III secretion protein (HrpB2) 17 130 3.3E-38 T 11-11-2016 IPR013391 Type III secretion protein HrpB2 ATY42_RS10380 4012daa16ceb84c02f1b87f33879d870 361 Pfam PF01650 Peptidase C13 family 74 284 3.1E-48 T 11-11-2016 IPR001096 Peptidase C13, legumain GO:0006508|GO:0008233 ATY42_RS10380 4012daa16ceb84c02f1b87f33879d870 361 SUPERFAMILY SSF52129 128 249 7.32E-6 T 11-11-2016 IPR029030 Caspase-like domain ATY42_RS14910 99267a30f96ca683071570a51dad4588 506 Gene3D G3DSA:3.80.30.20 233 443 4.4E-33 T 11-11-2016 IPR023404 Radical SAM, alpha/beta horseshoe ATY42_RS14910 99267a30f96ca683071570a51dad4588 506 SMART SM00729 229 439 2.5E-18 T 11-11-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 ATY42_RS14910 99267a30f96ca683071570a51dad4588 506 Pfam PF04055 Radical SAM superfamily 236 394 2.2E-14 T 11-11-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 ATY42_RS14910 99267a30f96ca683071570a51dad4588 506 SUPERFAMILY SSF102114 213 422 9.55E-32 T 11-11-2016 ATY42_RS02600 d3275fc4ac8327c97502747a131d81af 332 Gene3D G3DSA:3.40.50.150 139 313 6.9E-11 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02600 d3275fc4ac8327c97502747a131d81af 332 SUPERFAMILY SSF53335 127 314 2.52E-17 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS02600 d3275fc4ac8327c97502747a131d81af 332 Pfam PF12147 Putative methyltransferase 21 329 2.9E-152 T 11-11-2016 IPR022744 Methyltransferase domain, putative ATY42_RS02230 2a482b2587139d9b3c7269b7b8072283 279 Pfam PF06114 Domain of unknown function (DUF955) 110 271 1.7E-11 T 11-11-2016 IPR010359 HTH domain, IrrE-type ATY42_RS15395 3b8bfeea0391c391e68f1076d1cce741 118 SUPERFAMILY SSF55248 21 113 3.92E-31 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ATY42_RS15395 3b8bfeea0391c391e68f1076d1cce741 118 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 19 112 23.631 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ATY42_RS15395 3b8bfeea0391c391e68f1076d1cce741 118 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 21 109 7.6E-27 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ATY42_RS15395 3b8bfeea0391c391e68f1076d1cce741 118 Gene3D G3DSA:3.30.1360.20 18 113 2.0E-29 T 11-11-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 ATY42_RS12600 dbd9d0df0fa3e082dadfc4a8d3e7f676 108 SUPERFAMILY SSF54913 1 100 1.03E-26 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATY42_RS12600 dbd9d0df0fa3e082dadfc4a8d3e7f676 108 Pfam PF02641 Uncharacterized ACR, COG1993 5 84 8.5E-14 T 11-11-2016 IPR003793 Domain of unknown function DUF190 ATY42_RS12600 dbd9d0df0fa3e082dadfc4a8d3e7f676 108 Gene3D G3DSA:3.30.70.120 1 103 1.4E-25 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATY42_RS15750 772b7036172686eb32d7ffafd684fbfe 81 SUPERFAMILY SSF54292 5 80 4.19E-18 T 11-11-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ATY42_RS15750 772b7036172686eb32d7ffafd684fbfe 81 Gene3D G3DSA:3.10.20.30 7 73 9.3E-6 T 11-11-2016 IPR012675 Beta-grasp domain ATY42_RS15750 772b7036172686eb32d7ffafd684fbfe 81 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 80 9.0E-22 T 11-11-2016 ATY42_RS00675 90d8dafe9cfdd61b84309b7471df0e7d 229 SUPERFAMILY SSF52540 4 223 6.39E-71 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00675 90d8dafe9cfdd61b84309b7471df0e7d 229 SMART SM00382 33 221 4.1E-17 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS00675 90d8dafe9cfdd61b84309b7471df0e7d 229 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-11-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ATY42_RS00675 90d8dafe9cfdd61b84309b7471df0e7d 229 Gene3D G3DSA:3.40.50.300 4 223 1.0E-70 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00675 90d8dafe9cfdd61b84309b7471df0e7d 229 Pfam PF00005 ABC transporter 24 172 9.4E-33 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SMART SM00283 426 659 2.3E-68 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 494 657 5.4E-39 T 11-11-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SUPERFAMILY SSF58104 393 660 2.49E-62 T 11-11-2016 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SMART SM00304 190 247 28.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SMART SM00304 373 425 5.6E-5 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SMART SM00304 284 337 57.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SMART SM00304 100 157 3.4 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 SMART SM00304 586 639 120.0 T 11-11-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 Gene3D G3DSA:1.10.287.950 443 629 6.8E-43 T 11-11-2016 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 517 544 7.5E-27 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 546 575 7.5E-27 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS07265 3cb88b8610c928538680a5910cc22d99 718 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 7.5E-27 T 11-11-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF101967 187 322 3.27E-15 T 11-11-2016 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF101967 736 871 3.27E-26 T 11-11-2016 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 850 869 1.4E-6 T 11-11-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF05662 Coiled stalk of trimeric autotransporter adhesin 456 476 5.0E-9 T 11-11-2016 IPR008635 Coiled stalk of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Gene3D G3DSA:2.150.10.10 183 287 2.6E-14 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Gene3D G3DSA:2.150.10.10 295 479 1.1E-30 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Gene3D G3DSA:2.150.10.10 723 872 1.8E-28 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Gene3D G3DSA:2.150.10.10 107 165 9.3E-8 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Gene3D G3DSA:2.150.10.10 498 631 1.1E-18 T 11-11-2016 IPR011049 Serralysin-like metalloprotease, C-terminal ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF03895 YadA-like C-terminal region 910 987 6.6E-9 T 11-11-2016 IPR005594 YadA-like, C-terminal ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF05658 Head domain of trimeric autotransporter adhesin 559 584 7.9E-5 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF05658 Head domain of trimeric autotransporter adhesin 296 322 1.3E-5 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF05658 Head domain of trimeric autotransporter adhesin 763 789 2.3E-4 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 Pfam PF05658 Head domain of trimeric autotransporter adhesin 255 279 2.5E-5 T 11-11-2016 IPR008640 Head domain of trimeric autotransporter adhesin GO:0009405|GO:0019867 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF101967 497 631 5.62E-18 T 11-11-2016 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF101967 296 479 1.44E-25 T 11-11-2016 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF101967 91 211 5.62E-11 T 11-11-2016 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF54523 897 987 2.2E-10 T 11-11-2016 ATY42_RS03265 4a99d86894c99a223b9cc2d6e762ba28 989 SUPERFAMILY SSF54523 862 870 2.2E-10 T 11-11-2016 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 ProSitePatterns PS00099 Thiolases active site. 383 396 - T 11-11-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 SUPERFAMILY SSF53901 278 401 8.51E-42 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 Gene3D G3DSA:3.40.47.10 284 401 7.2E-57 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 Gene3D G3DSA:3.40.47.10 151 199 7.2E-57 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 400 1.1E-134 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 SUPERFAMILY SSF53901 3 277 3.67E-76 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 PIRSF PIRSF000429 1 402 2.1E-127 T 11-11-2016 IPR002155 Thiolase GO:0008152|GO:0016747 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-11-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 11-11-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 402 3.7E-214 T 11-11-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 Gene3D G3DSA:3.40.47.10 3 125 1.2E-66 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 Gene3D G3DSA:3.40.47.10 200 283 1.2E-66 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 Pfam PF00108 Thiolase, N-terminal domain 4 269 6.1E-77 T 11-11-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 ATY42_RS02260 b853b9f2e81899354f56b4bdc956881a 402 Pfam PF02803 Thiolase, C-terminal domain 278 401 2.1E-41 T 11-11-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 ATY42_RS01885 a7172fe1c6d008d51c341462dedf3d89 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01885 a7172fe1c6d008d51c341462dedf3d89 332 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.4E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS01885 a7172fe1c6d008d51c341462dedf3d89 332 SMART SM01126 148 293 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21415 1476665a18632fbe5ff590a48874b0d4 196 Pfam PF00881 Nitroreductase family 16 158 9.3E-16 T 11-11-2016 IPR029479 Nitroreductase Reactome: R-HSA-209968 ATY42_RS21415 1476665a18632fbe5ff590a48874b0d4 196 Gene3D G3DSA:3.40.109.10 5 194 2.0E-43 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ATY42_RS21415 1476665a18632fbe5ff590a48874b0d4 196 SUPERFAMILY SSF55469 10 195 2.49E-43 T 11-11-2016 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ATY42_RS21415 1476665a18632fbe5ff590a48874b0d4 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 46.791 T 11-11-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 ATY42_RS11775 e8efa6052923910f7ac9c44d37971937 408 Pfam PF05598 Transposase domain (DUF772) 1 66 4.8E-11 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS01400 ab1db6a48903164970823cee0a0e6688 249 Pfam PF02405 Permease MlaE 35 245 6.2E-68 T 11-11-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 ATY42_RS01400 ab1db6a48903164970823cee0a0e6688 249 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 3 249 6.0E-76 T 11-11-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria ATY42_RS10225 718403e10aaade323a7d6834b9ebed0a 153 Pfam PF01609 Transposase DDE domain 1 152 1.0E-13 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10225 718403e10aaade323a7d6834b9ebed0a 153 SUPERFAMILY SSF53098 2 152 5.31E-13 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS18250 032a13e34f7eedba7ea34d5c45450abe 157 SUPERFAMILY SSF55826 5 150 4.45E-37 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATY42_RS18250 032a13e34f7eedba7ea34d5c45450abe 157 Gene3D G3DSA:3.90.960.10 3 157 1.5E-46 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATY42_RS18250 032a13e34f7eedba7ea34d5c45450abe 157 PIRSF PIRSF006181 1 157 5.1E-40 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ATY42_RS18250 032a13e34f7eedba7ea34d5c45450abe 157 Pfam PF04073 Aminoacyl-tRNA editing domain 35 144 9.6E-22 T 11-11-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ATY42_RS18250 032a13e34f7eedba7ea34d5c45450abe 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 155 4.0E-49 T 11-11-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ATY42_RS04675 ffe72404c1d966004a62dbf4463f283f 138 Gene3D G3DSA:3.90.1300.10 2 97 2.0E-26 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATY42_RS04675 ffe72404c1d966004a62dbf4463f283f 138 Pfam PF01425 Amidase 11 97 1.4E-13 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATY42_RS04675 ffe72404c1d966004a62dbf4463f283f 138 SUPERFAMILY SSF75304 2 98 5.63E-22 T 11-11-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ATY42_RS03770 462e2aa23b850c1ae7efefa3aba71bdc 308 Gene3D G3DSA:3.40.50.2000 124 245 4.2E-11 T 11-11-2016 ATY42_RS03770 462e2aa23b850c1ae7efefa3aba71bdc 308 SUPERFAMILY SSF53756 6 302 1.47E-30 T 11-11-2016 ATY42_RS03770 462e2aa23b850c1ae7efefa3aba71bdc 308 Pfam PF00534 Glycosyl transferases group 1 127 271 4.8E-14 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS03445 b5dc1d0ebe04ac3baef100c10cea4d08 266 SUPERFAMILY SSF53850 30 266 7.65E-83 T 11-11-2016 ATY42_RS03445 b5dc1d0ebe04ac3baef100c10cea4d08 266 PIRSF PIRSF002854 1 266 4.2E-102 T 11-11-2016 IPR004872 Lipoprotein NlpA family ATY42_RS03445 b5dc1d0ebe04ac3baef100c10cea4d08 266 Pfam PF03180 NLPA lipoprotein 31 266 1.7E-97 T 11-11-2016 IPR004872 Lipoprotein NlpA family ATY42_RS03445 b5dc1d0ebe04ac3baef100c10cea4d08 266 Gene3D G3DSA:3.40.190.10 29 157 1.5E-50 T 11-11-2016 ATY42_RS10900 59e14bb48c2dd05bc6db9245c545b214 460 SUPERFAMILY SSF53098 39 424 2.2E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10900 59e14bb48c2dd05bc6db9245c545b214 460 Pfam PF13546 DDE superfamily endonuclease 39 312 5.4E-91 T 11-11-2016 ATY42_RS01245 f98f7a2f33dd90cdb2fcc2af3a88b4de 376 SUPERFAMILY SSF51445 34 339 1.99E-83 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS01245 f98f7a2f33dd90cdb2fcc2af3a88b4de 376 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 41 314 4.4E-53 T 11-11-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 ATY42_RS01245 f98f7a2f33dd90cdb2fcc2af3a88b4de 376 Gene3D G3DSA:3.20.20.80 33 342 1.8E-96 T 11-11-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 ATY42_RS01245 f98f7a2f33dd90cdb2fcc2af3a88b4de 376 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 159 168 - T 11-11-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 ATY42_RS20990 c30079c7a4c2cccfa9c82351eba1f2bb 281 SUPERFAMILY SSF53098 108 268 5.44E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20990 c30079c7a4c2cccfa9c82351eba1f2bb 281 Gene3D G3DSA:3.30.420.10 109 265 5.4E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20990 c30079c7a4c2cccfa9c82351eba1f2bb 281 Pfam PF13276 HTH-like domain 46 98 3.1E-9 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS20990 c30079c7a4c2cccfa9c82351eba1f2bb 281 Pfam PF13683 Integrase core domain 199 264 7.4E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS06410 016307cfba27ac370c9ea16bc1887cb4 283 Pfam PF13358 DDE superfamily endonuclease 111 248 6.3E-29 T 11-11-2016 ATY42_RS06410 016307cfba27ac370c9ea16bc1887cb4 283 Pfam PF13592 Winged helix-turn helix 36 94 3.6E-17 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS21145 91f722fca66e0c3f406b76d75457a6ad 198 TIGRFAM TIGR04273 Y_sulf_Ax21: sulfation-dependent quorum factor, Ax21 family 6 198 7.4E-98 T 11-11-2016 IPR026364 Ax21 family ATY42_RS21145 91f722fca66e0c3f406b76d75457a6ad 198 SUPERFAMILY SSF56935 24 133 2.23E-9 T 11-11-2016 ATY42_RS21145 91f722fca66e0c3f406b76d75457a6ad 198 Gene3D G3DSA:2.40.160.10 24 197 2.1E-10 T 11-11-2016 IPR023614 Porin domain ATY42_RS21145 91f722fca66e0c3f406b76d75457a6ad 198 Pfam PF13505 Outer membrane protein beta-barrel domain 5 182 1.0E-8 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel ATY42_RS20370 512205909d52c607a6c5188c15b0c4fb 282 Pfam PF01212 Beta-eliminating lyase 3 277 2.0E-28 T 11-11-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 ATY42_RS20370 512205909d52c607a6c5188c15b0c4fb 282 Gene3D G3DSA:3.90.1150.10 236 277 1.2E-12 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS20370 512205909d52c607a6c5188c15b0c4fb 282 SUPERFAMILY SSF53383 2 275 2.23E-59 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS20370 512205909d52c607a6c5188c15b0c4fb 282 Gene3D G3DSA:3.40.640.10 2 233 3.7E-50 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS22590 5f48374c7877fd59bffefc712f4006cf 267 Gene3D G3DSA:3.40.1130.10 89 199 6.0E-9 T 11-11-2016 ATY42_RS22590 5f48374c7877fd59bffefc712f4006cf 267 SMART SM00563 90 202 2.5E-27 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS22590 5f48374c7877fd59bffefc712f4006cf 267 SUPERFAMILY SSF69593 22 203 4.45E-23 T 11-11-2016 ATY42_RS22590 5f48374c7877fd59bffefc712f4006cf 267 Pfam PF01553 Acyltransferase 87 199 5.6E-22 T 11-11-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 ATY42_RS16860 22e5eb6f11677bbf9105e02ab3b5ac9c 249 Pfam PF12762 ISXO2-like transposase domain 66 214 1.9E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS16860 22e5eb6f11677bbf9105e02ab3b5ac9c 249 SMART SM01126 66 214 2.6E-48 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS09025 fc88477b28bca0d85edd59bbdcf39dd3 458 Pfam PF01609 Transposase DDE domain 284 421 3.7E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS09025 fc88477b28bca0d85edd59bbdcf39dd3 458 Pfam PF05598 Transposase domain (DUF772) 59 133 2.7E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS12135 8a9d25b0c1c3dc4216fc9c1ad71021ce 191 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 172 8.8E-16 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS12135 8a9d25b0c1c3dc4216fc9c1ad71021ce 191 Gene3D G3DSA:3.40.80.10 15 184 2.1E-33 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS12135 8a9d25b0c1c3dc4216fc9c1ad71021ce 191 SMART SM00644 20 162 2.4E-18 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS12135 8a9d25b0c1c3dc4216fc9c1ad71021ce 191 SUPERFAMILY SSF55846 26 186 1.14E-33 T 11-11-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 ATY42_RS02840 7d49fc442c14225aa9075867f9d4d062 167 Gene3D G3DSA:1.20.1250.20 11 78 1.0E-4 T 11-11-2016 ATY42_RS02840 7d49fc442c14225aa9075867f9d4d062 167 Pfam PF03703 Bacterial PH domain 80 156 1.8E-14 T 11-11-2016 IPR005182 Domain of unknown function DUF304 ATY42_RS02840 7d49fc442c14225aa9075867f9d4d062 167 SUPERFAMILY SSF103473 12 82 1.7E-5 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS11840 cb2ac5db571fd20edb7197746131d453 231 Pfam PF01609 Transposase DDE domain 56 189 3.4E-10 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS05055 54aea1a71fb7364e087d9e08c784b0af 734 SUPERFAMILY SSF53474 203 300 1.37E-10 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05055 54aea1a71fb7364e087d9e08c784b0af 734 Pfam PF11678 Protein of unknown function (DUF3274) 418 709 6.4E-71 T 11-11-2016 IPR021692 Protein of unknown function DUF3274 ATY42_RS05055 54aea1a71fb7364e087d9e08c784b0af 734 Gene3D G3DSA:3.40.50.1820 204 297 1.9E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05055 54aea1a71fb7364e087d9e08c784b0af 734 Gene3D G3DSA:3.40.50.1820 363 390 1.9E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS17340 6a71d08314819045d6e9ecbf2b2c04ba 524 SMART SM00220 210 500 1.0E-6 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATY42_RS17340 6a71d08314819045d6e9ecbf2b2c04ba 524 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 216 247 - T 11-11-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 ATY42_RS17340 6a71d08314819045d6e9ecbf2b2c04ba 524 Pfam PF00069 Protein kinase domain 282 500 6.4E-11 T 11-11-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ATY42_RS17340 6a71d08314819045d6e9ecbf2b2c04ba 524 SUPERFAMILY SSF56112 280 505 4.1E-18 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS17340 6a71d08314819045d6e9ecbf2b2c04ba 524 Gene3D G3DSA:3.30.200.20 206 362 2.7E-5 T 11-11-2016 ATY42_RS17340 6a71d08314819045d6e9ecbf2b2c04ba 524 Gene3D G3DSA:1.10.510.10 363 511 5.8E-10 T 11-11-2016 ATY42_RS00195 ddcca20528b8f25774d0cb7b53299949 110 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 5 102 1.6E-23 T 11-11-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 ATY42_RS00195 ddcca20528b8f25774d0cb7b53299949 110 Gene3D G3DSA:3.30.559.10 5 102 1.1E-25 T 11-11-2016 IPR023213 Chloramphenicol acetyltransferase-like domain Reactome: R-HSA-389661 ATY42_RS00195 ddcca20528b8f25774d0cb7b53299949 110 SUPERFAMILY SSF52777 5 106 2.98E-25 T 11-11-2016 ATY42_RS00835 5d638eb56ea1b8f076f1953a71f510e3 175 Gene3D G3DSA:2.60.120.200 16 107 1.6E-4 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ATY42_RS00835 5d638eb56ea1b8f076f1953a71f510e3 175 SUPERFAMILY SSF49899 17 125 7.52E-8 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ATY42_RS12335 b21651b36319b48e52b5839fed7cb103 235 SUPERFAMILY SSF53448 27 227 7.69E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS12335 b21651b36319b48e52b5839fed7cb103 235 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 38 102 9.9E-8 T 11-11-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif ATY42_RS19710 a5aabc7ad20840654c329873c256fb62 417 Pfam PF13641 Glycosyltransferase like family 2 53 275 1.1E-33 T 11-11-2016 ATY42_RS19710 a5aabc7ad20840654c329873c256fb62 417 Gene3D G3DSA:3.90.550.10 55 297 6.7E-42 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS19710 a5aabc7ad20840654c329873c256fb62 417 SUPERFAMILY SSF53448 41 317 9.85E-60 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS19710 a5aabc7ad20840654c329873c256fb62 417 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 10 415 2.4E-194 T 11-11-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 ATY42_RS01080 79f82a7845b87381e1bbaf7773c597c5 221 Pfam PF04337 Protein of unknown function, DUF480 10 153 3.4E-52 T 11-11-2016 IPR007432 Protein of unknown function DUF480 ATY42_RS01080 79f82a7845b87381e1bbaf7773c597c5 221 Gene3D G3DSA:1.10.10.10 94 169 3.4E-30 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01080 79f82a7845b87381e1bbaf7773c597c5 221 SUPERFAMILY SSF46785 90 169 3.66E-25 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01080 79f82a7845b87381e1bbaf7773c597c5 221 Hamap MF_01584 UPF0502 protein YceH [yceH]. 10 214 29.004 T 11-11-2016 IPR007432 Protein of unknown function DUF480 ATY42_RS01080 79f82a7845b87381e1bbaf7773c597c5 221 Gene3D G3DSA:1.10.10.10 2 92 1.4E-37 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS01080 79f82a7845b87381e1bbaf7773c597c5 221 SUPERFAMILY SSF46785 7 87 1.78E-28 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS02115 f9a6d4ab77c495dd8d0c60a79bb1cd37 241 Pfam PF00156 Phosphoribosyl transferase domain 196 236 6.4E-7 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATY42_RS02115 f9a6d4ab77c495dd8d0c60a79bb1cd37 241 SUPERFAMILY SSF53271 64 240 9.31E-32 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS02115 f9a6d4ab77c495dd8d0c60a79bb1cd37 241 Gene3D G3DSA:3.40.50.2020 72 240 1.2E-30 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS10560 cca6d8a4c47a600b7f6a47a0a996b50c 293 Gene3D G3DSA:1.10.3720.10 60 290 2.8E-67 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS10560 cca6d8a4c47a600b7f6a47a0a996b50c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 286 7.9E-19 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS10560 cca6d8a4c47a600b7f6a47a0a996b50c 293 SUPERFAMILY SSF161098 54 280 2.35E-63 T 11-11-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 ATY42_RS13800 a78a53b3bd517921f5c3435db69ea010 251 Gene3D G3DSA:3.40.50.880 26 189 5.1E-18 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS13800 a78a53b3bd517921f5c3435db69ea010 251 Pfam PF07722 Peptidase C26 5 190 1.6E-48 T 11-11-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 ATY42_RS13800 a78a53b3bd517921f5c3435db69ea010 251 SUPERFAMILY SSF52317 28 193 5.04E-18 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS15055 61dde0fafbd6e5421934c59b4d1a2cb0 165 Pfam PF03918 Cytochrome C biogenesis protein 33 157 2.6E-47 T 11-11-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family ATY42_RS23110 8a5cf3566edeb9d6ab6f6916c78fa44a 232 Pfam PF13835 Domain of unknown function (DUF4194) 50 208 2.5E-44 T 11-11-2016 IPR025449 Protein of unknown function DUF4194 ATY42_RS16565 2d5a888280484d32d59be0c812be0bcd 365 SUPERFAMILY SSF55486 196 326 1.28E-19 T 11-11-2016 ATY42_RS16565 2d5a888280484d32d59be0c812be0bcd 365 Gene3D G3DSA:3.40.390.10 206 281 1.1E-8 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS14725 e53c16832c68d974fd86a07ef396d613 92 Gene3D G3DSA:2.30.30.100 1 69 5.4E-37 T 11-11-2016 ATY42_RS14725 e53c16832c68d974fd86a07ef396d613 92 SUPERFAMILY SSF50182 7 68 6.93E-24 T 11-11-2016 IPR010920 LSM domain ATY42_RS14725 e53c16832c68d974fd86a07ef396d613 92 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 9.7E-30 T 11-11-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ATY42_RS14725 e53c16832c68d974fd86a07ef396d613 92 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.333 T 11-11-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 7.6E-19 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.6E-19 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 7.6E-19 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 1.8E-20 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 24.114 T 11-11-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 Pfam PF01197 Ribosomal protein L31 1 79 6.1E-29 T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-11-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ATY42_RS05620 9117c3087091150183e95e085f18b776 80 SUPERFAMILY SSF143800 1 79 2.35E-22 T 11-11-2016 ATY42_RS15840 3eca99ae3c876d3ae20ffcbfb9d9c6ba 73 Gene3D G3DSA:1.10.10.10 17 59 7.7E-5 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15840 3eca99ae3c876d3ae20ffcbfb9d9c6ba 73 SUPERFAMILY SSF46955 21 64 2.38E-7 T 11-11-2016 IPR009061 Putative DNA-binding domain ATY42_RS02905 1d79d694318a2a772d13f7b91e603767 239 Gene3D G3DSA:1.20.58.430 25 221 6.5E-77 T 11-11-2016 IPR023220 Type IV secretion system, VirB5-domain ATY42_RS02905 1d79d694318a2a772d13f7b91e603767 239 TIGRFAM TIGR02791 VirB5: P-type DNA transfer protein VirB5 13 221 1.4E-83 T 11-11-2016 IPR014158 Type IV secretion system, VirB5 ATY42_RS02905 1d79d694318a2a772d13f7b91e603767 239 SUPERFAMILY SSF101082 26 221 1.96E-59 T 11-11-2016 IPR023220 Type IV secretion system, VirB5-domain ATY42_RS02905 1d79d694318a2a772d13f7b91e603767 239 Pfam PF07996 Type IV secretion system proteins 25 220 5.6E-74 T 11-11-2016 IPR014158 Type IV secretion system, VirB5 ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 Gene3D G3DSA:3.40.50.720 277 320 3.5E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 Gene3D G3DSA:3.40.50.720 124 190 3.5E-22 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 Gene3D G3DSA:3.40.50.720 64 118 6.2E-16 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 Pfam PF01266 FAD dependent oxidoreductase 126 402 1.8E-18 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 ProSitePatterns PS00677 D-amino acid oxidases signature. 91 109 - T 11-11-2016 IPR006181 D-amino acid oxidase, conserved site GO:0003884|GO:0055114 Reactome: R-HSA-389661 ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 Gene3D G3DSA:3.30.9.10 321 401 3.3E-11 T 11-11-2016 ATY42_RS03115 85e02f4a36ffb2c3eb840ae527014641 404 SUPERFAMILY SSF51971 126 342 3.47E-19 T 11-11-2016 ATY42_RS02485 82173988a0cfe9ef9bda3312a2d405ab 75 Pfam PF04519 Polymer-forming cytoskeletal 16 75 1.7E-10 T 11-11-2016 IPR007607 Protein of unknown function DUF583 ATY42_RS21260 6d2af24ac1bdfc7231f96ccd2bace9ad 181 SUPERFAMILY SSF51161 2 174 5.13E-45 T 11-11-2016 IPR011004 Trimeric LpxA-like ATY42_RS21260 6d2af24ac1bdfc7231f96ccd2bace9ad 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 2.0E-4 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS21260 6d2af24ac1bdfc7231f96ccd2bace9ad 181 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.3E-5 T 11-11-2016 IPR001451 Hexapeptide repeat ATY42_RS21260 6d2af24ac1bdfc7231f96ccd2bace9ad 181 Gene3D G3DSA:2.160.10.10 2 174 1.0E-47 T 11-11-2016 ATY42_RS14050 52948deb625d0bb6c6167ca3a1f46cfc 472 SUPERFAMILY SSF53098 40 436 2.12E-31 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14050 52948deb625d0bb6c6167ca3a1f46cfc 472 Pfam PF13546 DDE superfamily endonuclease 51 324 3.8E-91 T 11-11-2016 ATY42_RS17670 762e598af72fc6268ab8c5c4b1da70cb 357 Pfam PF06812 ImpA, N-terminal, type VI secretion system 8 130 3.3E-37 T 11-11-2016 IPR010657 ImpA, N-terminal ATY42_RS17670 762e598af72fc6268ab8c5c4b1da70cb 357 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 2 350 1.4E-130 T 11-11-2016 IPR017740 Type VI secretion system-associated, ImpA ATY42_RS11250 093170f6e0152fced8f1d8141aa4952f 1251 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 506 708 6.5E-133 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11250 093170f6e0152fced8f1d8141aa4952f 1251 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 842 995 1.7E-73 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11250 093170f6e0152fced8f1d8141aa4952f 1251 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 255 336 1.7E-39 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS17495 8e974e1fb65bc9271db4225987c69655 162 Pfam PF04965 Gene 25-like lysozyme 33 133 1.3E-20 T 11-11-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD ATY42_RS17495 8e974e1fb65bc9271db4225987c69655 162 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 5 153 5.2E-39 T 11-11-2016 IPR017737 Type VI secretion system, lysozyme-related protein ATY42_RS17495 8e974e1fb65bc9271db4225987c69655 162 SUPERFAMILY SSF160719 33 146 1.18E-10 T 11-11-2016 ATY42_RS17495 8e974e1fb65bc9271db4225987c69655 162 Gene3D G3DSA:3.10.450.40 86 146 2.1E-5 T 11-11-2016 ATY42_RS14615 44498e80384b7c1e4581e5e8bef74a9d 139 SUPERFAMILY SSF53474 12 123 4.48E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS14615 44498e80384b7c1e4581e5e8bef74a9d 139 Gene3D G3DSA:3.40.50.1820 41 123 5.9E-6 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS19945 773887803abb93bcb89a7ff432524318 372 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 9.9E-118 T 11-11-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 ATY42_RS19945 773887803abb93bcb89a7ff432524318 372 Pfam PF01098 Cell cycle protein 21 367 4.3E-95 T 11-11-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 ATY42_RS19945 773887803abb93bcb89a7ff432524318 372 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 325 349 - T 11-11-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 ATY42_RS06910 857fd9a6d3f0d53d2a08ae7725bccad4 118 Gene3D G3DSA:3.40.50.880 4 111 6.7E-34 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS06910 857fd9a6d3f0d53d2a08ae7725bccad4 118 SUPERFAMILY SSF52317 18 110 2.89E-27 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS06910 857fd9a6d3f0d53d2a08ae7725bccad4 118 Pfam PF01965 DJ-1/PfpI family 4 108 1.1E-29 T 11-11-2016 IPR002818 DJ-1/PfpI ATY42_RS16450 216a39606100a88b104dcb03aae9e06f 191 SUPERFAMILY SSF53474 1 191 9.17E-26 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS16450 216a39606100a88b104dcb03aae9e06f 191 Pfam PF01738 Dienelactone hydrolase family 1 189 6.3E-31 T 11-11-2016 IPR002925 Dienelactone hydrolase GO:0016787 ATY42_RS16450 216a39606100a88b104dcb03aae9e06f 191 Gene3D G3DSA:3.40.50.1820 1 191 4.8E-33 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS04270 8d971d3327f63afe655744312f88a4fd 357 Pfam PF02618 YceG-like family 51 339 3.2E-74 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like ATY42_RS04270 8d971d3327f63afe655744312f88a4fd 357 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 19 345 2.5E-76 T 11-11-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like ATY42_RS04270 8d971d3327f63afe655744312f88a4fd 357 Gene3D G3DSA:3.30.160.60 312 346 1.3E-16 T 11-11-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 ATY42_RS02830 00d96def67277455a7db4f9dacc3410a 351 Gene3D G3DSA:3.40.50.2000 214 313 4.6E-6 T 11-11-2016 ATY42_RS02830 00d96def67277455a7db4f9dacc3410a 351 PIRSF PIRSF028458 1 351 1.6E-180 T 11-11-2016 IPR016886 Predicted glycerophosphotransferase UCP028458 ATY42_RS02830 00d96def67277455a7db4f9dacc3410a 351 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 128 311 2.8E-5 T 11-11-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ATY42_RS02830 00d96def67277455a7db4f9dacc3410a 351 SUPERFAMILY SSF53756 7 318 5.76E-32 T 11-11-2016 ATY42_RS07690 f0390f86334be2d9add3ae78b2688e30 196 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 17 185 5.4E-42 T 11-11-2016 IPR012912 Plasmid pRiA4b, Orf3 ATY42_RS07690 f0390f86334be2d9add3ae78b2688e30 196 SUPERFAMILY SSF159941 16 188 1.06E-43 T 11-11-2016 IPR024047 Protein MM3350-like domain ATY42_RS07690 f0390f86334be2d9add3ae78b2688e30 196 Gene3D G3DSA:3.10.290.30 14 188 1.6E-42 T 11-11-2016 IPR024047 Protein MM3350-like domain ATY42_RS09255 6786d771f2c8392ef5bc5cd16eb30775 200 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 27 199 2.6E-19 T 11-11-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 ATY42_RS09255 6786d771f2c8392ef5bc5cd16eb30775 200 Gene3D G3DSA:3.90.1140.10 27 199 6.2E-33 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase ATY42_RS09255 6786d771f2c8392ef5bc5cd16eb30775 200 SUPERFAMILY SSF55144 27 199 5.23E-32 T 11-11-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase ATY42_RS09255 6786d771f2c8392ef5bc5cd16eb30775 200 Pfam PF13563 2'-5' RNA ligase superfamily 53 175 6.1E-13 T 11-11-2016 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 Gene3D G3DSA:3.50.50.60 8 183 8.9E-42 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 Gene3D G3DSA:3.50.50.60 269 354 8.9E-42 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 SUPERFAMILY SSF51905 268 386 2.71E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 SUPERFAMILY SSF51905 8 178 2.71E-54 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 Pfam PF01494 FAD binding domain 8 334 1.3E-27 T 11-11-2016 IPR002938 FAD-binding domain GO:0071949 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 7.5E-18 T 11-11-2016 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 7.5E-18 T 11-11-2016 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 7.5E-18 T 11-11-2016 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 7.5E-18 T 11-11-2016 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-11-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 ATY42_RS18830 bfb55ff1188277f548024ffa0650d1d5 393 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 391 4.2E-130 T 11-11-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 ATY42_RS10445 7d43c2210ddaa9ffc595afe255ac6469 337 Gene3D G3DSA:1.25.40.10 67 186 2.9E-19 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS10445 7d43c2210ddaa9ffc595afe255ac6469 337 Pfam PF13432 Tetratricopeptide repeat 142 177 0.0014 T 11-11-2016 ATY42_RS10445 7d43c2210ddaa9ffc595afe255ac6469 337 Pfam PF13432 Tetratricopeptide repeat 68 120 8.4E-7 T 11-11-2016 ATY42_RS10445 7d43c2210ddaa9ffc595afe255ac6469 337 SUPERFAMILY SSF48452 79 205 4.03E-16 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS12780 ec17b4a509a30567e991cd82331afc39 392 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 225 355 6.3E-20 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ATY42_RS12780 ec17b4a509a30567e991cd82331afc39 392 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 17 355 2.4E-72 T 11-11-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 ATY42_RS12780 ec17b4a509a30567e991cd82331afc39 392 SMART SM00047 207 368 1.6E-39 T 11-11-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ATY42_RS12780 ec17b4a509a30567e991cd82331afc39 392 Pfam PF10135 Rod binding protein 38 84 1.3E-12 T 11-11-2016 IPR019301 Flagellar protein FlgJ, N-terminal ATY42_RS12780 ec17b4a509a30567e991cd82331afc39 392 PRINTS PR01002 Flagellar protein FlgJ signature 16 39 1.6E-11 T 11-11-2016 ATY42_RS12780 ec17b4a509a30567e991cd82331afc39 392 PRINTS PR01002 Flagellar protein FlgJ signature 61 83 1.6E-11 T 11-11-2016 ATY42_RS09790 9a6b97e81963cde34950cdb0508df709 229 Pfam PF14279 HNH endonuclease 124 178 3.5E-17 T 11-11-2016 IPR029471 HNH endonuclease 5 ATY42_RS09790 9a6b97e81963cde34950cdb0508df709 229 SMART SM00507 111 164 1.3E-9 T 11-11-2016 IPR003615 HNH nuclease ATY42_RS01460 89a1ae9e9448b73dfb51791c78409ccc 411 Pfam PF01610 Transposase 155 390 7.2E-62 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS01460 89a1ae9e9448b73dfb51791c78409ccc 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 Gene3D G3DSA:2.140.10.30 55 500 1.3E-64 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 118 471 1.1E-70 T 11-11-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 SUPERFAMILY SSF53474 502 757 2.36E-57 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 SUPERFAMILY SSF82171 154 494 4.84E-37 T 11-11-2016 ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 SUPERFAMILY SSF82171 61 96 4.84E-37 T 11-11-2016 ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 Gene3D G3DSA:3.40.50.1820 502 758 5.9E-65 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20325 cbfaeebfb441fc3301225637603bf931 774 Pfam PF00326 Prolyl oligopeptidase family 561 757 7.0E-48 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS05300 5e6ad28c9a2aed124f274ec9fb1bcbdd 226 Pfam PF01965 DJ-1/PfpI family 25 222 8.5E-16 T 11-11-2016 IPR002818 DJ-1/PfpI ATY42_RS05300 5e6ad28c9a2aed124f274ec9fb1bcbdd 226 SUPERFAMILY SSF52317 1 223 2.38E-77 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS05300 5e6ad28c9a2aed124f274ec9fb1bcbdd 226 Gene3D G3DSA:3.40.50.880 1 223 5.8E-92 T 11-11-2016 IPR029062 Class I glutamine amidotransferase-like ATY42_RS22885 bb757963dcbf1fdfd516c9b48cfd2d53 198 SUPERFAMILY SSF56214 28 75 2.27E-5 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS22885 bb757963dcbf1fdfd516c9b48cfd2d53 198 Gene3D G3DSA:3.90.470.20 96 191 9.0E-24 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS22885 bb757963dcbf1fdfd516c9b48cfd2d53 198 SUPERFAMILY SSF56214 83 193 3.53E-26 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS22885 bb757963dcbf1fdfd516c9b48cfd2d53 198 Gene3D G3DSA:3.90.470.20 30 95 2.4E-11 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS22885 bb757963dcbf1fdfd516c9b48cfd2d53 198 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 84 170 8.5E-19 T 11-11-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 ATY42_RS17270 7d4dd2666f27308c57f03a37336a9c6f 472 SUPERFAMILY SSF56672 1 228 1.53E-29 T 11-11-2016 ATY42_RS17270 7d4dd2666f27308c57f03a37336a9c6f 472 Pfam PF00817 impB/mucB/samB family 23 149 1.1E-6 T 11-11-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ATY42_RS04160 270971533b8865c9f87fc8ef5245a417 385 Pfam PF01636 Phosphotransferase enzyme family 59 308 3.0E-28 T 11-11-2016 IPR002575 Aminoglycoside phosphotransferase ATY42_RS04160 270971533b8865c9f87fc8ef5245a417 385 Gene3D G3DSA:3.90.1200.10 123 325 1.6E-28 T 11-11-2016 ATY42_RS04160 270971533b8865c9f87fc8ef5245a417 385 SUPERFAMILY SSF56112 47 340 2.76E-40 T 11-11-2016 IPR011009 Protein kinase-like domain ATY42_RS22365 24c01b60dc0c5b3aba44b319c64a8ee8 201 Pfam PF11379 Protein of unknown function (DUF3182) 52 190 4.2E-33 T 11-11-2016 IPR021519 Protein of unknown function DUF3182 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 28 43 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 63 78 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 43 58 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 111 128 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 195 213 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 89 108 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 169 187 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 259 271 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 PRINTS PR01010 Flagellar P-ring protein signature 128 146 6.6E-78 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 Hamap MF_00416 Flagellar P-ring protein [flgI]. 8 372 37.919 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS12775 ad1f1b63b4f7228a868ad8a60d15db0f 372 Pfam PF02119 Flagellar P-ring protein 28 371 2.6E-135 T 11-11-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 ATY42_RS00515 f37b4d41cf8932ff6b8a1304c01c457b 156 SUPERFAMILY SSF69635 52 133 8.37E-7 T 11-11-2016 ATY42_RS00515 f37b4d41cf8932ff6b8a1304c01c457b 156 Pfam PF05932 Tir chaperone protein (CesT) family 51 131 3.8E-6 T 11-11-2016 IPR010261 Tir chaperone protein (CesT) family GO:0005737|GO:0050708 ATY42_RS00125 5efdefbed98763fba9af84464c2eed74 112 SUPERFAMILY SSF46894 64 111 1.25E-5 T 11-11-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ATY42_RS00125 5efdefbed98763fba9af84464c2eed74 112 Gene3D G3DSA:1.10.10.10 64 111 6.4E-6 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS12440 fd37afc036178c063bbedcf9b0a6829b 219 SUPERFAMILY SSF46689 22 138 6.63E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS12440 fd37afc036178c063bbedcf9b0a6829b 219 Pfam PF13551 Winged helix-turn helix 27 86 5.3E-15 T 11-11-2016 ATY42_RS12440 fd37afc036178c063bbedcf9b0a6829b 219 Pfam PF13592 Winged helix-turn helix 104 162 8.4E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS16485 ea0eb5ec0c54f9a75abb05319c7568c0 232 Pfam PF01694 Rhomboid family 59 208 9.3E-40 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS16485 ea0eb5ec0c54f9a75abb05319c7568c0 232 SMART SM01160 56 145 3.5E-6 T 11-11-2016 ATY42_RS16485 ea0eb5ec0c54f9a75abb05319c7568c0 232 Gene3D G3DSA:1.20.1540.10 4 206 2.5E-45 T 11-11-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ATY42_RS16485 ea0eb5ec0c54f9a75abb05319c7568c0 232 SUPERFAMILY SSF144091 3 206 5.23E-45 T 11-11-2016 ATY42_RS06830 907b330641e1ab300669fb9d2e329c6a 440 Gene3D G3DSA:3.90.1150.10 302 439 6.2E-43 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS06830 907b330641e1ab300669fb9d2e329c6a 440 PIRSF PIRSF001434 4 440 1.4E-102 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS06830 907b330641e1ab300669fb9d2e329c6a 440 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 13 437 2.3E-108 T 11-11-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ATY42_RS06830 907b330641e1ab300669fb9d2e329c6a 440 SUPERFAMILY SSF53383 13 437 9.25E-97 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS06830 907b330641e1ab300669fb9d2e329c6a 440 Gene3D G3DSA:3.40.640.10 13 301 1.6E-86 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS15170 d2336e327ab21c6c7327614ac4b6be10 175 Gene3D G3DSA:3.30.420.10 108 150 4.5E-5 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS15170 d2336e327ab21c6c7327614ac4b6be10 175 Pfam PF13276 HTH-like domain 46 99 1.8E-10 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS15170 d2336e327ab21c6c7327614ac4b6be10 175 SUPERFAMILY SSF53098 107 150 6.07E-5 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 Gene3D G3DSA:3.90.1150.10 293 407 4.5E-29 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 Gene3D G3DSA:3.40.640.10 46 292 5.2E-84 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 Pfam PF00266 Aminotransferase class-V 34 402 3.3E-144 T 11-11-2016 IPR000192 Aminotransferase class V domain ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 PIRSF PIRSF005572 31 412 4.4E-48 T 11-11-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 SUPERFAMILY SSF53383 13 411 9.52E-123 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 225 244 - T 11-11-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ATY42_RS06870 cfc88dd7ec7c32be58a9767c94b45936 414 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 16 413 8.2E-173 T 11-11-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 ATY42_RS07275 706cfc0f0a60519b38940b29d8c9c958 109 SUPERFAMILY SSF52091 1 97 7.06E-15 T 11-11-2016 IPR002645 STAS domain ATY42_RS07275 706cfc0f0a60519b38940b29d8c9c958 109 Gene3D G3DSA:3.30.750.24 8 96 3.6E-13 T 11-11-2016 IPR002645 STAS domain ATY42_RS07275 706cfc0f0a60519b38940b29d8c9c958 109 Pfam PF13466 STAS domain 14 92 1.5E-15 T 11-11-2016 IPR002645 STAS domain ATY42_RS03300 c168dec12c14663c649c0650f5ad8bdc 284 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 281 5.8E-123 T 11-11-2016 IPR022522 Flagellar motor stator, MotA ATY42_RS03300 c168dec12c14663c649c0650f5ad8bdc 284 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 11-11-2016 IPR000540 Flagellar motor protein MotA, conserved site ATY42_RS03300 c168dec12c14663c649c0650f5ad8bdc 284 Pfam PF01618 MotA/TolQ/ExbB proton channel family 138 232 8.8E-8 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ATY42_RS19470 128b647187bc6187b97fc06f7d776c00 75 Pfam PF14329 Domain of unknown function (DUF4386) 15 73 1.7E-9 T 11-11-2016 IPR025495 Protein of unknown function DUF4386 ATY42_RS21210 8b0420d2ef1617597076c5f63a44ef88 833 Pfam PF04851 Type III restriction enzyme, res subunit 32 200 4.0E-9 T 11-11-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ATY42_RS21210 8b0420d2ef1617597076c5f63a44ef88 833 Gene3D G3DSA:3.40.50.300 45 206 3.1E-11 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS21210 8b0420d2ef1617597076c5f63a44ef88 833 SUPERFAMILY SSF52540 37 207 2.27E-13 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12290 0261d00bb15b43c3b1ff678a2d1dca27 102 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 1 79 3.8E-17 T 11-11-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ATY42_RS21695 10dac961cbe72a164390102642d44323 319 SUPERFAMILY SSF56784 227 294 8.25E-5 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS21695 10dac961cbe72a164390102642d44323 319 SUPERFAMILY SSF56784 162 173 8.25E-5 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS21695 10dac961cbe72a164390102642d44323 319 Pfam PF06189 5'-nucleotidase 38 308 2.6E-107 T 11-11-2016 IPR010394 5-nucleotidase GO:0000166|GO:0000287|GO:0005737|GO:0008253|GO:0009117 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|Reactome: R-HSA-74259 ATY42_RS05475 63d8a0e81ab85efb452321c90eab1e9d 149 Pfam PF02643 Uncharacterized ACR, COG1430 34 140 3.1E-31 T 11-11-2016 IPR003795 Protein of unknown function DUF192 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 23 33 1.5E-26 T 11-11-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 96 111 1.5E-26 T 11-11-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 116 129 1.5E-26 T 11-11-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 76 89 1.5E-26 T 11-11-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 PRINTS PR01338 Type III secretion system outer membrane K protein family signature 164 176 1.5E-26 T 11-11-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 TIGRFAM TIGR02544 III_secr_YscJ: type III secretion apparatus lipoprotein, YscJ/HrcJ family 5 191 4.5E-72 T 11-11-2016 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ GO:0009306 ATY42_RS00450 653a8b403a527a493a6ac376354e1171 253 Pfam PF01514 Secretory protein of YscJ/FliF family 7 185 1.6E-28 T 11-11-2016 IPR006182 Secretory protein YscJ/FliF ATY42_RS10025 6482cf1c687cdb60af343be92fa3311f 120 Gene3D G3DSA:1.10.10.10 4 75 1.5E-23 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10025 6482cf1c687cdb60af343be92fa3311f 120 SUPERFAMILY SSF46785 5 79 3.38E-19 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS10025 6482cf1c687cdb60af343be92fa3311f 120 SMART SM00345 16 75 6.2E-12 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS10025 6482cf1c687cdb60af343be92fa3311f 120 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.2E-14 T 11-11-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ATY42_RS22805 855c0ceef9c5d5c121cc51446198e252 365 Gene3D G3DSA:2.115.10.20 47 306 9.5E-53 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS22805 855c0ceef9c5d5c121cc51446198e252 365 SUPERFAMILY SSF75005 48 308 6.89E-58 T 11-11-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain ATY42_RS22805 855c0ceef9c5d5c121cc51446198e252 365 Pfam PF04616 Glycosyl hydrolases family 43 48 308 2.8E-69 T 11-11-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 ATY42_RS18810 ebdd8dbf2f0ca1a738c94b904cc339ab 152 Pfam PF13358 DDE superfamily endonuclease 22 141 1.5E-28 T 11-11-2016 ATY42_RS01365 9b3d8368932f93653a8cfc384a6053e6 115 Pfam PF13586 Transposase DDE domain 29 111 1.6E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS19610 9b3d8368932f93653a8cfc384a6053e6 115 Pfam PF13586 Transposase DDE domain 29 111 1.6E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS18700 9b3d8368932f93653a8cfc384a6053e6 115 Pfam PF13586 Transposase DDE domain 29 111 1.6E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS01440 9b3d8368932f93653a8cfc384a6053e6 115 Pfam PF13586 Transposase DDE domain 29 111 1.6E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS01500 9b3d8368932f93653a8cfc384a6053e6 115 Pfam PF13586 Transposase DDE domain 29 111 1.6E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS04850 9b3d8368932f93653a8cfc384a6053e6 115 Pfam PF13586 Transposase DDE domain 29 111 1.6E-10 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 91 102 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 Pfam PF14697 4Fe-4S dicluster domain 84 137 6.7E-15 T 11-11-2016 ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 SUPERFAMILY SSF54862 12 140 1.99E-26 T 11-11-2016 ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 Gene3D G3DSA:3.30.70.20 22 93 5.2E-8 T 11-11-2016 ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 Pfam PF04060 Putative Fe-S cluster 19 51 5.2E-15 T 11-11-2016 IPR007202 4Fe-4S domain GO:0051536 ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 PIRSF PIRSF005784 1 142 1.9E-63 T 11-11-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 Gene3D G3DSA:3.30.70.20 94 139 2.1E-14 T 11-11-2016 ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 121 132 - T 11-11-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ATY42_RS09365 8dded9040564ccee274633fb319f668e 142 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 5 141 1.7E-64 T 11-11-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 ATY42_RS13165 8a8a1058454b12d0795773777645419b 36 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 2 28 4.3E-18 T 11-11-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 ATY42_RS13165 8a8a1058454b12d0795773777645419b 36 Pfam PF08173 Membrane bound YbgT-like protein 2 27 1.3E-13 T 11-11-2016 IPR012994 Membrane bound YbgT-like ATY42_RS10655 d5f10c2236b27df6ac0eab019fa7f664 106 Pfam PF00999 Sodium/hydrogen exchanger family 14 73 1.2E-8 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ATY42_RS10835 21326c2137aef875aafd164bf9a4b090 408 Pfam PF09712 Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E) 12 300 1.4E-79 T 11-11-2016 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit ATY42_RS10835 21326c2137aef875aafd164bf9a4b090 408 TIGRFAM TIGR01834 PHA_synth_III_E: poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit 11 312 7.7E-113 T 11-11-2016 IPR010123 Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 517 533 3.4E-17 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 478 490 3.4E-17 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 496 508 3.4E-17 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 588 599 3.4E-17 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 Pfam PF05649 Peptidase family M13 49 434 6.1E-90 T 11-11-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 Gene3D G3DSA:3.40.390.10 316 437 8.9E-100 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 Gene3D G3DSA:3.40.390.10 477 689 8.9E-100 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 Pfam PF01431 Peptidase family M13 486 686 5.4E-60 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS03165 5eb15f6cbd2bd9d77865ff8221489cde 689 SUPERFAMILY SSF55486 37 689 6.96E-197 T 11-11-2016 ATY42_RS13200 7c2d1f52c315c6cbc3b948f6ae904b69 121 Pfam PF07883 Cupin domain 34 101 4.8E-18 T 11-11-2016 IPR013096 Cupin 2, conserved barrel ATY42_RS13200 7c2d1f52c315c6cbc3b948f6ae904b69 121 SUPERFAMILY SSF51182 5 106 3.43E-26 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS13200 7c2d1f52c315c6cbc3b948f6ae904b69 121 Gene3D G3DSA:2.60.120.10 5 110 1.4E-24 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS16300 a0b1380b541dd9613a2ab8d5957ebd00 216 Gene3D G3DSA:1.10.10.700 21 76 7.7E-4 T 11-11-2016 ATY42_RS16300 a0b1380b541dd9613a2ab8d5957ebd00 216 Gene3D G3DSA:3.30.420.10 136 198 7.6E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16300 a0b1380b541dd9613a2ab8d5957ebd00 216 SUPERFAMILY SSF53098 134 194 1.23E-6 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16300 a0b1380b541dd9613a2ab8d5957ebd00 216 SUPERFAMILY SSF46689 19 110 1.76E-5 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS20980 9da3d355d6202b39fef5d3edeb217e3e 218 Pfam PF07916 TraG-like protein, N-terminal region 10 208 1.5E-39 T 11-11-2016 IPR012931 TraG-like, N-terminal ATY42_RS03900 b0abe860dd1318ac0209d5a75759cb9d 419 Pfam PF12821 Threonine/Serine exporter, ThrE 288 410 8.8E-14 T 11-11-2016 IPR024528 Threonine/Serine exporter, ThrE ATY42_RS03900 b0abe860dd1318ac0209d5a75759cb9d 419 Pfam PF06738 Putative threonine/serine exporter 21 263 1.2E-53 T 11-11-2016 IPR010619 Putative threonine/serine exporter ATY42_RS23020 2b18bec06f072dd6295138b49ecfc7f3 328 Pfam PF13546 DDE superfamily endonuclease 2 180 6.1E-58 T 11-11-2016 ATY42_RS23020 2b18bec06f072dd6295138b49ecfc7f3 328 SUPERFAMILY SSF53098 157 292 7.59E-24 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS23020 2b18bec06f072dd6295138b49ecfc7f3 328 SUPERFAMILY SSF53098 7 128 7.59E-24 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04870 0c412025f6d5c10ad0b2532165adfe0b 269 Pfam PF13546 DDE superfamily endonuclease 39 267 7.4E-80 T 11-11-2016 ATY42_RS04870 0c412025f6d5c10ad0b2532165adfe0b 269 SUPERFAMILY SSF53098 29 260 4.1E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04890 3f869e2fbdc2179d9e0c6283b45a1d26 253 Pfam PF12811 Bax inhibitor 1 like 23 251 7.2E-79 T 11-11-2016 IPR010539 Protein of unknown function UCP009160 ATY42_RS04890 3f869e2fbdc2179d9e0c6283b45a1d26 253 PIRSF PIRSF009160 1 253 6.2E-101 T 11-11-2016 IPR010539 Protein of unknown function UCP009160 ATY42_RS01355 8f199ac554add55e76412948a94649cb 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 6.5E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS01355 8f199ac554add55e76412948a94649cb 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS01355 8f199ac554add55e76412948a94649cb 320 SMART SM01126 137 285 3.7E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20510 87140df53821b7d812deeaa30f745a3a 183 SUPERFAMILY SSF52518 33 182 1.35E-49 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS20510 87140df53821b7d812deeaa30f745a3a 183 Pfam PF02779 Transketolase, pyrimidine binding domain 33 182 3.2E-34 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS20510 87140df53821b7d812deeaa30f745a3a 183 SMART SM00861 34 183 1.9E-31 T 11-11-2016 IPR005475 Transketolase-like, pyrimidine-binding domain ATY42_RS20510 87140df53821b7d812deeaa30f745a3a 183 Gene3D G3DSA:3.40.50.970 33 182 1.1E-56 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS02075 e09252fef2869c256ad5cf2669857748 363 SUPERFAMILY SSF56634 32 345 2.88E-89 T 11-11-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS02075 e09252fef2869c256ad5cf2669857748 363 Gene3D G3DSA:2.40.180.10 44 347 4.3E-71 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS02075 e09252fef2869c256ad5cf2669857748 363 Pfam PF00199 Catalase 64 340 7.6E-24 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS02075 e09252fef2869c256ad5cf2669857748 363 PIRSF PIRSF000296 15 348 5.1E-112 T 11-11-2016 IPR024168 Catalase, SrpA-type, predicted ATY42_RS02075 e09252fef2869c256ad5cf2669857748 363 SMART SM01060 23 363 2.8E-6 T 11-11-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-74259 ATY42_RS02195 abfb38bfe4f592dd27c50df069ca06b8 605 SUPERFAMILY SSF51735 402 535 3.94E-30 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02195 abfb38bfe4f592dd27c50df069ca06b8 605 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 282 9.4E-76 T 11-11-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 ATY42_RS02195 abfb38bfe4f592dd27c50df069ca06b8 605 Pfam PF00999 Sodium/hydrogen exchanger family 10 371 6.1E-62 T 11-11-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ATY42_RS02195 abfb38bfe4f592dd27c50df069ca06b8 605 Gene3D G3DSA:3.40.50.720 398 531 1.9E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS02195 abfb38bfe4f592dd27c50df069ca06b8 605 Pfam PF02254 TrkA-N domain 404 513 2.4E-26 T 11-11-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ATY42_RS03555 f32367312182d2bbb819b726b754af98 49 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 4 48 4.8E-9 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03555 f32367312182d2bbb819b726b754af98 49 SUPERFAMILY SSF55874 2 47 1.19E-15 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03555 f32367312182d2bbb819b726b754af98 49 Gene3D G3DSA:3.30.565.10 2 48 9.4E-16 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03555 f32367312182d2bbb819b726b754af98 49 PRINTS PR00344 Bacterial sensor protein C-terminal signature 33 46 9.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS03555 f32367312182d2bbb819b726b754af98 49 PRINTS PR00344 Bacterial sensor protein C-terminal signature 9 27 9.2E-7 T 11-11-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ATY42_RS10255 26143b8e80b8984074c01a4bf22c3778 204 SUPERFAMILY SSF53098 18 200 1.29E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10255 26143b8e80b8984074c01a4bf22c3778 204 Pfam PF13546 DDE superfamily endonuclease 18 201 8.9E-65 T 11-11-2016 ATY42_RS06955 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS06955 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS16775 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS16775 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00250 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00250 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07725 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF01609 Transposase DDE domain 135 310 1.1E-32 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07725 6f76e68cc3e8cadeb2c510a561ab80ad 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS16580 3a559afd3762c9202f1180fafa58b74a 455 Pfam PF01523 Putative modulator of DNA gyrase 39 331 2.7E-55 T 11-11-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 ATY42_RS16580 3a559afd3762c9202f1180fafa58b74a 455 SUPERFAMILY SSF111283 21 454 5.36E-125 T 11-11-2016 ATY42_RS01690 a05154a1460864b703f5d1922cda00e4 300 SUPERFAMILY SSF53098 39 278 9.86E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01690 a05154a1460864b703f5d1922cda00e4 300 Pfam PF13546 DDE superfamily endonuclease 39 299 1.9E-87 T 11-11-2016 ATY42_RS00110 f52f4a48908ac2fb169d7656f484cce6 388 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 74.816 T 11-11-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 ATY42_RS00110 f52f4a48908ac2fb169d7656f484cce6 388 Pfam PF01070 FMN-dependent dehydrogenase 13 376 1.7E-126 T 11-11-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 ATY42_RS00110 f52f4a48908ac2fb169d7656f484cce6 388 PIRSF PIRSF000138 2 380 1.2E-122 T 11-11-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 ATY42_RS00110 f52f4a48908ac2fb169d7656f484cce6 388 SUPERFAMILY SSF51395 6 375 4.88E-98 T 11-11-2016 ATY42_RS00110 f52f4a48908ac2fb169d7656f484cce6 388 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 11-11-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 ATY42_RS00110 f52f4a48908ac2fb169d7656f484cce6 388 Gene3D G3DSA:3.20.20.70 6 377 1.3E-134 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS08430 b3dea2d8c0f8427dbb03ecbdf5b37bdf 174 SUPERFAMILY SSF48452 75 160 5.38E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08430 b3dea2d8c0f8427dbb03ecbdf5b37bdf 174 Gene3D G3DSA:1.25.40.10 65 131 1.1E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS00905 ae9e0b7a9ab4cd51a052b99b3faab1ee 460 Pfam PF13546 DDE superfamily endonuclease 39 312 1.0E-90 T 11-11-2016 ATY42_RS00905 ae9e0b7a9ab4cd51a052b99b3faab1ee 460 SUPERFAMILY SSF53098 39 424 6.22E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS16885 c1e8a7ea230c6c20011d89bea0b94b86 252 Gene3D G3DSA:3.40.50.150 62 198 4.0E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS16885 c1e8a7ea230c6c20011d89bea0b94b86 252 SUPERFAMILY SSF53335 24 241 1.14E-36 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS16885 c1e8a7ea230c6c20011d89bea0b94b86 252 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 30 244 28.248 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ATY42_RS16885 c1e8a7ea230c6c20011d89bea0b94b86 252 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 58 243 1.7E-45 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ATY42_RS16885 c1e8a7ea230c6c20011d89bea0b94b86 252 Pfam PF02390 Putative methyltransferase 72 239 3.8E-48 T 11-11-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ATY42_RS09050 c99f43018b007a17b2369ce024a6689c 184 Pfam PF00156 Phosphoribosyl transferase domain 15 167 3.6E-22 T 11-11-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 ATY42_RS09050 c99f43018b007a17b2369ce024a6689c 184 Gene3D G3DSA:3.40.50.2020 10 184 1.7E-46 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS09050 c99f43018b007a17b2369ce024a6689c 184 SUPERFAMILY SSF53271 6 183 3.12E-44 T 11-11-2016 IPR029057 Phosphoribosyltransferase-like ATY42_RS21380 3af82b97b308fe6e9d3596a850cca0ed 149 Pfam PF13276 HTH-like domain 48 103 3.0E-17 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS19220 b4c5455c4c2a248d1243d6e2624ae1a8 148 Pfam PF05258 Protein of unknown function (DUF721) 31 96 6.1E-12 T 11-11-2016 IPR007922 Protein of unknown function DUF721/UPF0232 ATY42_RS16025 2d77a8efe5f0022ddf3132b8dacdba88 71 SUPERFAMILY SSF46689 2 67 9.5E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS16025 2d77a8efe5f0022ddf3132b8dacdba88 71 Gene3D G3DSA:1.10.10.60 13 71 9.8E-7 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS16025 2d77a8efe5f0022ddf3132b8dacdba88 71 Pfam PF01527 Transposase 2 70 3.9E-20 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS06640 03f536932a105bc43a51e8ee5e998ddf 196 SMART SM00855 4 152 1.7E-11 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS06640 03f536932a105bc43a51e8ee5e998ddf 196 SUPERFAMILY SSF53254 3 180 6.0E-44 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS06640 03f536932a105bc43a51e8ee5e998ddf 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 179 2.3E-40 T 11-11-2016 IPR013078 Histidine phosphatase superfamily, clade-1 ATY42_RS06640 03f536932a105bc43a51e8ee5e998ddf 196 Gene3D G3DSA:3.40.50.1240 3 177 1.8E-40 T 11-11-2016 IPR029033 Histidine phosphatase superfamily ATY42_RS21760 ef28f48b059febecad22ad44f5b5d1f4 327 Pfam PF08908 Domain of unknown function (DUF1852) 1 323 1.3E-182 T 11-11-2016 IPR015004 Protein of unknown function DUF1852 ATY42_RS21760 ef28f48b059febecad22ad44f5b5d1f4 327 PIRSF PIRSF034367 1 327 6.0E-204 T 11-11-2016 IPR015004 Protein of unknown function DUF1852 ATY42_RS20680 3613cc6e479bd01720044dc68299e515 438 PIRSF PIRSF006060 1 437 3.0E-71 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS20680 3613cc6e479bd01720044dc68299e515 438 Pfam PF13520 Amino acid permease 18 406 5.9E-49 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS09330 f12fe9d6917b307691b4ab1aa0b203a6 416 SUPERFAMILY SSF51905 5 301 9.32E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09330 f12fe9d6917b307691b4ab1aa0b203a6 416 SUPERFAMILY SSF51905 381 411 9.32E-52 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09330 f12fe9d6917b307691b4ab1aa0b203a6 416 Pfam PF01593 Flavin containing amine oxidoreductase 13 267 5.4E-16 T 11-11-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 ATY42_RS09330 f12fe9d6917b307691b4ab1aa0b203a6 416 Gene3D G3DSA:3.50.50.60 5 96 1.7E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09330 f12fe9d6917b307691b4ab1aa0b203a6 416 Gene3D G3DSA:3.50.50.60 202 287 1.7E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09330 f12fe9d6917b307691b4ab1aa0b203a6 416 Gene3D G3DSA:3.50.50.60 151 152 1.7E-27 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS20685 215a1f644cfba2123121f89ee3192a58 86 Pfam PF13586 Transposase DDE domain 2 82 5.7E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS15715 0094932096ba062921903397ddfc6653 528 PIRSF PIRSF006060 1 455 4.4E-72 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS15715 0094932096ba062921903397ddfc6653 528 Pfam PF13520 Amino acid permease 16 423 5.1E-42 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS04110 d646587e4ec21cd348be75dcd521d77b 373 Pfam PF05137 Fimbrial assembly protein (PilN) 287 358 1.2E-13 T 11-11-2016 IPR007813 Fimbrial assembly PilN ATY42_RS04110 d646587e4ec21cd348be75dcd521d77b 373 SUPERFAMILY SSF53067 85 184 9.06E-6 T 11-11-2016 ATY42_RS00060 8a345e09838108de5dc79c395f34442d 255 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 4 247 2.1E-83 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ATY42_RS00060 8a345e09838108de5dc79c395f34442d 255 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 253 85.433 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ATY42_RS00060 8a345e09838108de5dc79c395f34442d 255 Gene3D G3DSA:3.20.20.70 2 249 7.3E-86 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS00060 8a345e09838108de5dc79c395f34442d 255 SUPERFAMILY SSF63892 2 249 3.01E-77 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ATY42_RS00060 8a345e09838108de5dc79c395f34442d 255 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 5 248 4.4E-64 T 11-11-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 ATY42_RS19685 50d9fcd2a77998813f9b810ca374f9ff 271 Pfam PF12762 ISXO2-like transposase domain 148 270 9.6E-22 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS19685 50d9fcd2a77998813f9b810ca374f9ff 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS19685 50d9fcd2a77998813f9b810ca374f9ff 271 SMART SM01126 148 270 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS10010 d284723f2e83ad110cb5c474d54a3e61 276 Pfam PF13349 Putative adhesin 117 246 4.2E-7 T 11-11-2016 IPR025164 Putative adhesin ATY42_RS05735 3b19eac551fb7b0d932227f7ea8e275f 184 SUPERFAMILY SSF56935 7 113 4.49E-18 T 11-11-2016 ATY42_RS05735 3b19eac551fb7b0d932227f7ea8e275f 184 Gene3D G3DSA:2.170.130.10 6 47 9.4E-9 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS05735 3b19eac551fb7b0d932227f7ea8e275f 184 Gene3D G3DSA:2.40.170.20 50 113 1.1E-8 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS06355 3d7289aa175c12f619cf821d01b266ab 222 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 9 195 4.5E-64 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ATY42_RS06355 3d7289aa175c12f619cf821d01b266ab 222 SUPERFAMILY SSF53328 8 203 2.09E-58 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS06355 3d7289aa175c12f619cf821d01b266ab 222 Gene3D G3DSA:3.40.50.170 8 198 1.9E-62 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS06355 3d7289aa175c12f619cf821d01b266ab 222 Pfam PF00551 Formyl transferase 9 184 5.4E-52 T 11-11-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ATY42_RS06355 3d7289aa175c12f619cf821d01b266ab 222 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 9 192 28.503 T 11-11-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ATY42_RS04115 343f0e9b2ae3133215e0cca89dc3567c 217 Pfam PF10741 Type II secretion system (T2SS), protein M subtype b 76 190 3.4E-31 T 11-11-2016 IPR007690 Type II secretion system, protein M GO:0006858 ATY42_RS03790 8f81703ad40c960f43dcd6a75b935628 453 Pfam PF13546 DDE superfamily endonuclease 32 305 2.6E-91 T 11-11-2016 ATY42_RS03790 8f81703ad40c960f43dcd6a75b935628 453 SUPERFAMILY SSF53098 32 417 1.37E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00295 b4c61dcfb303dc6271ba8c7a56429eb0 459 SUPERFAMILY SSF53098 289 426 1.44E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00295 b4c61dcfb303dc6271ba8c7a56429eb0 459 SUPERFAMILY SSF53098 39 260 1.44E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00295 b4c61dcfb303dc6271ba8c7a56429eb0 459 Pfam PF13546 DDE superfamily endonuclease 39 312 1.9E-89 T 11-11-2016 ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF05593 RHS Repeat 235 271 4.2E-9 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF05593 RHS Repeat 151 188 5.3E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF05593 RHS Repeat 341 376 1.9E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF05593 RHS Repeat 193 229 2.1E-6 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF05593 RHS Repeat 109 146 4.0E-11 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF05593 RHS Repeat 537 573 1.1E-7 T 11-11-2016 IPR031325 RHS repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 912 987 2.0E-17 T 11-11-2016 IPR022385 Rhs repeat-associated core GO:0097264 ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF03527 RHS protein 885 918 1.2E-6 T 11-11-2016 IPR001826 RHS protein ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Pfam PF14440 Xanthomonas XOO_2897-like deaminase 1015 1115 2.1E-21 T 11-11-2016 IPR032722 Deaminase, Xanthomonas XOO_2897-like ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 109 148 8.2E-8 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 537 577 5.4E-5 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 277 317 1.7E-4 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 193 233 7.6E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 235 276 7.3E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 361 397 4.6E-6 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 319 360 3.1E-8 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 152 189 2.5E-7 T 11-11-2016 IPR006530 YD repeat ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 Gene3D G3DSA:2.130.10.10 74 165 2.9E-4 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 SUPERFAMILY SSF69304 247 285 2.35E-6 T 11-11-2016 ATY42_RS08065 0a7cb53d37346f12e4facbce5ee605fa 1126 SUPERFAMILY SSF69304 99 214 2.35E-6 T 11-11-2016 ATY42_RS12195 75349159fd06de6dc9a0bf6072a3d00f 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS12195 75349159fd06de6dc9a0bf6072a3d00f 411 Pfam PF01610 Transposase 155 390 2.2E-62 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS00575 01a79d5dd7a012251fbef63b36ff52eb 283 SUPERFAMILY SSF58113 11 158 1.18E-5 T 11-11-2016 ATY42_RS00820 227c6e37c96652dc32bc3cbe9f23638d 73 SUPERFAMILY SSF51182 3 72 1.13E-28 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS00820 227c6e37c96652dc32bc3cbe9f23638d 73 Pfam PF04962 KduI/IolB family 4 72 1.1E-12 T 11-11-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 ATY42_RS00820 227c6e37c96652dc32bc3cbe9f23638d 73 Gene3D G3DSA:2.60.120.500 4 72 3.2E-30 T 11-11-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 ATY42_RS12355 2f0b18edf0f6d0cfc3c0d6f29cc33e8a 213 Pfam PF01609 Transposase DDE domain 36 171 4.1E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS09635 6ed8fe737a77c91edd344f0bf234ff7e 174 Pfam PF05229 Spore Coat Protein U domain 25 171 1.5E-33 T 11-11-2016 IPR007893 Spore coat protein U ATY42_RS09635 6ed8fe737a77c91edd344f0bf234ff7e 174 SMART SM00972 111 171 1.9E-20 T 11-11-2016 IPR007893 Spore coat protein U ATY42_RS02510 0c79ef009b7aa3161d10d6e37304a3bf 426 PIRSF PIRSF029171 1 426 2.0E-107 T 11-11-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 ATY42_RS02510 0c79ef009b7aa3161d10d6e37304a3bf 426 Pfam PF03583 Secretory lipase 135 213 1.0E-6 T 11-11-2016 IPR005152 Lipase, secreted GO:0004806|GO:0016042 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 ATY42_RS02510 0c79ef009b7aa3161d10d6e37304a3bf 426 Gene3D G3DSA:3.40.50.1820 328 391 1.0E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02510 0c79ef009b7aa3161d10d6e37304a3bf 426 Gene3D G3DSA:3.40.50.1820 88 246 1.0E-18 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02510 0c79ef009b7aa3161d10d6e37304a3bf 426 SUPERFAMILY SSF53474 130 240 9.38E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS02510 0c79ef009b7aa3161d10d6e37304a3bf 426 SUPERFAMILY SSF53474 284 387 9.38E-19 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS09260 f31915cef0d6c56873b0b85a63e3a52e 202 PIRSF PIRSF035170 4 201 6.5E-70 T 11-11-2016 IPR009218 Predicted HD phosphohydrolase ATY42_RS09260 f31915cef0d6c56873b0b85a63e3a52e 202 SUPERFAMILY SSF109604 19 195 7.85E-13 T 11-11-2016 ATY42_RS14925 89b8aa4a5d124ed996ac2757937980c6 370 Pfam PF13579 Glycosyl transferase 4-like domain 23 168 4.8E-11 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATY42_RS14925 89b8aa4a5d124ed996ac2757937980c6 370 Pfam PF00534 Glycosyl transferases group 1 192 339 4.3E-23 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS14925 89b8aa4a5d124ed996ac2757937980c6 370 SUPERFAMILY SSF53756 22 363 6.0E-57 T 11-11-2016 ATY42_RS14925 89b8aa4a5d124ed996ac2757937980c6 370 Gene3D G3DSA:3.40.50.2000 188 337 6.2E-15 T 11-11-2016 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 SUPERFAMILY SSF56024 326 419 2.79E-22 T 11-11-2016 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 SUPERFAMILY SSF56024 513 589 2.79E-22 T 11-11-2016 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 Gene3D G3DSA:3.30.870.10 329 424 9.7E-33 T 11-11-2016 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 Gene3D G3DSA:3.30.870.10 521 592 9.7E-33 T 11-11-2016 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 Gene3D G3DSA:3.30.870.10 68 258 3.4E-39 T 11-11-2016 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 SMART SM00155 516 543 0.018 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 SMART SM00155 186 213 0.0037 T 11-11-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 Pfam PF13091 PLD-like domain 91 245 1.4E-19 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 Pfam PF13091 PLD-like domain 519 570 2.2E-9 T 11-11-2016 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148 ATY42_RS22600 5d4a816b7cc8a9b4be501c98b9abc04a 671 SUPERFAMILY SSF56024 67 256 1.67E-37 T 11-11-2016 ATY42_RS06140 8d108f779ca6a43db7e31d672b31a69b 190 Pfam PF06693 Protein of unknown function (DUF1190) 28 180 1.3E-29 T 11-11-2016 IPR009576 Biofilm formation YgiB ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 62 1.3E-9 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 Gene3D G3DSA:1.10.357.10 6 200 1.6E-42 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 SUPERFAMILY SSF48498 79 202 1.1E-13 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 5.3E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 5.3E-6 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 Pfam PF16859 Bacterial transcriptional repressor C-terminal 79 165 1.2E-8 T 11-11-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal ATY42_RS13890 bff47fc2cf2c967d28ff9920250a7852 219 SUPERFAMILY SSF46689 5 74 7.48E-14 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS06865 e925a5cd6ae072fa6fd968988e872660 179 SUPERFAMILY SSF55729 1 155 9.62E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS06865 e925a5cd6ae072fa6fd968988e872660 179 Gene3D G3DSA:3.40.630.30 4 155 3.1E-27 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS06865 e925a5cd6ae072fa6fd968988e872660 179 Pfam PF13673 Acetyltransferase (GNAT) domain 45 145 6.7E-13 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS20490 020fc63a7dfd7419764c2a8888b9fca6 196 Pfam PF13899 Thioredoxin-like 75 159 3.4E-12 T 11-11-2016 ATY42_RS20490 020fc63a7dfd7419764c2a8888b9fca6 196 SUPERFAMILY SSF52833 54 189 2.53E-18 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS20490 020fc63a7dfd7419764c2a8888b9fca6 196 Gene3D G3DSA:3.40.30.10 67 191 1.1E-15 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS07670 07a44d81bdbb752e1d2a235b19484278 489 Gene3D G3DSA:1.20.1600.10 76 480 1.9E-76 T 11-11-2016 ATY42_RS07670 07a44d81bdbb752e1d2a235b19484278 489 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 480 9.8E-74 T 11-11-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 ATY42_RS07670 07a44d81bdbb752e1d2a235b19484278 489 Pfam PF02321 Outer membrane efflux protein 303 478 4.1E-23 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS07670 07a44d81bdbb752e1d2a235b19484278 489 Pfam PF02321 Outer membrane efflux protein 86 272 2.1E-11 T 11-11-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 ATY42_RS07670 07a44d81bdbb752e1d2a235b19484278 489 SUPERFAMILY SSF56954 75 480 1.31E-73 T 11-11-2016 ATY42_RS07670 07a44d81bdbb752e1d2a235b19484278 489 SUPERFAMILY SSF56954 6 40 1.31E-73 T 11-11-2016 ATY42_RS14780 107e48e9258c5b1de50701150df621d6 179 SMART SM00463 93 177 5.0E-14 T 11-11-2016 IPR002625 Smr domain ATY42_RS14780 107e48e9258c5b1de50701150df621d6 179 Pfam PF01713 Smr domain 96 176 7.4E-22 T 11-11-2016 IPR002625 Smr domain ATY42_RS14780 107e48e9258c5b1de50701150df621d6 179 SUPERFAMILY SSF160443 94 176 8.24E-17 T 11-11-2016 IPR002625 Smr domain ATY42_RS05100 77eb9665a7b9ba287895672167acb6b7 249 Pfam PF12706 Beta-lactamase superfamily domain 32 189 1.1E-13 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS05100 77eb9665a7b9ba287895672167acb6b7 249 SUPERFAMILY SSF56281 6 215 1.83E-26 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS05100 77eb9665a7b9ba287895672167acb6b7 249 SMART SM00849 19 192 0.0065 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS05100 77eb9665a7b9ba287895672167acb6b7 249 Gene3D G3DSA:3.60.15.10 7 185 1.0E-21 T 11-11-2016 IPR001279 Metallo-beta-lactamase ATY42_RS00260 cf7ef86db377a940042bd9a97895350e 110 SUPERFAMILY SSF53098 12 110 4.63E-7 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20525 5e5026c7e2b631ef7162124b34b45d25 126 SUPERFAMILY SSF50044 62 123 3.28E-7 T 11-11-2016 IPR001452 SH3 domain GO:0005515 ATY42_RS20525 5e5026c7e2b631ef7162124b34b45d25 126 PIRSF PIRSF034961 1 114 2.2E-44 T 11-11-2016 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 ATY42_RS20525 5e5026c7e2b631ef7162124b34b45d25 126 Pfam PF07653 Variant SH3 domain 2 57 4.6E-6 T 11-11-2016 IPR011511 Variant SH3 domain ATY42_RS20525 5e5026c7e2b631ef7162124b34b45d25 126 Gene3D G3DSA:2.30.30.40 62 117 3.6E-5 T 11-11-2016 ATY42_RS03700 f20aa7d1bf72ea971da28b531911fd96 111 Pfam PF09361 Phasin protein 8 95 1.2E-6 T 11-11-2016 IPR018968 Phasin ATY42_RS15120 054e363029b87b975d90cd7ff25c2f06 197 Gene3D G3DSA:1.10.3850.10 10 179 4.9E-40 T 11-11-2016 ATY42_RS15120 054e363029b87b975d90cd7ff25c2f06 197 Pfam PF00873 AcrB/AcrD/AcrF family 10 178 2.5E-60 T 11-11-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS15120 054e363029b87b975d90cd7ff25c2f06 197 SUPERFAMILY SSF82866 12 178 3.27E-33 T 11-11-2016 ATY42_RS09875 8f679bee7e1d42bf8754dccb7cdf7524 403 SUPERFAMILY SSF53098 20 368 2.65E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS09875 8f679bee7e1d42bf8754dccb7cdf7524 403 Pfam PF13546 DDE superfamily endonuclease 1 255 2.2E-86 T 11-11-2016 ATY42_RS17090 601a425dfb522c00a718796a3a99b7ab 168 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 138 168 4.0E-11 T 11-11-2016 ATY42_RS17090 601a425dfb522c00a718796a3a99b7ab 168 Pfam PF04191 Phospholipid methyltransferase 58 156 1.1E-11 T 11-11-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ATY42_RS15455 9f94cd06d69b76f0e536403498b8cf5b 143 SUPERFAMILY SSF54534 33 140 2.75E-38 T 11-11-2016 ATY42_RS15455 9f94cd06d69b76f0e536403498b8cf5b 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 42 138 2.7E-34 T 11-11-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 ATY42_RS15455 9f94cd06d69b76f0e536403498b8cf5b 143 Gene3D G3DSA:3.10.50.40 35 142 4.3E-44 T 11-11-2016 ATY42_RS09215 462a9605efbb29ea880f2da6be2f4dff 349 Gene3D G3DSA:1.20.1510.10 40 248 3.2E-34 T 11-11-2016 IPR027469 Cation efflux protein transmembrane domain ATY42_RS09215 462a9605efbb29ea880f2da6be2f4dff 349 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 41 331 3.4E-41 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATY42_RS09215 462a9605efbb29ea880f2da6be2f4dff 349 Pfam PF01545 Cation efflux family 42 245 4.8E-30 T 11-11-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ATY42_RS09215 462a9605efbb29ea880f2da6be2f4dff 349 SUPERFAMILY SSF161111 37 250 4.18E-41 T 11-11-2016 ATY42_RS08925 e0e7d3d92affa9aa1b6490cad7e3d898 501 Gene3D G3DSA:3.40.605.10 7 264 3.2E-96 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS08925 e0e7d3d92affa9aa1b6490cad7e3d898 501 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 484 5.2E-221 T 11-11-2016 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 ATY42_RS08925 e0e7d3d92affa9aa1b6490cad7e3d898 501 Pfam PF00171 Aldehyde dehydrogenase family 25 480 9.3E-141 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS08925 e0e7d3d92affa9aa1b6490cad7e3d898 501 Gene3D G3DSA:3.40.309.10 265 445 1.3E-64 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS08925 e0e7d3d92affa9aa1b6490cad7e3d898 501 SUPERFAMILY SSF53720 5 487 6.81E-144 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS08925 e0e7d3d92affa9aa1b6490cad7e3d898 501 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 11-11-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 ATY42_RS08550 94b74223492ec288b4aac381c344fd71 35 Pfam PF11747 Killing trait 11 35 1.1E-11 T 11-11-2016 IPR021070 Killing trait, RebB ATY42_RS03735 4a1a87f85f6e16b6d51501a8d22cfbfd 127 Pfam PF14346 Domain of unknown function (DUF4398) 21 117 1.6E-16 T 11-11-2016 IPR025511 Domain of unknown function DUF4398 ATY42_RS15480 c72fa502b2ed3de3cccedb823a7c8954 111 Pfam PF13546 DDE superfamily endonuclease 18 111 2.0E-25 T 11-11-2016 ATY42_RS10950 1cef8e0d562d77eb0c4bdfab20733d87 510 Gene3D G3DSA:3.40.309.10 279 457 1.0E-54 T 11-11-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 ATY42_RS10950 1cef8e0d562d77eb0c4bdfab20733d87 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 11-11-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 ATY42_RS10950 1cef8e0d562d77eb0c4bdfab20733d87 510 SUPERFAMILY SSF53720 20 498 3.14E-132 T 11-11-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 ATY42_RS10950 1cef8e0d562d77eb0c4bdfab20733d87 510 Gene3D G3DSA:3.40.605.10 30 278 7.4E-69 T 11-11-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS10950 1cef8e0d562d77eb0c4bdfab20733d87 510 Pfam PF00171 Aldehyde dehydrogenase family 28 491 2.3E-129 T 11-11-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 ATY42_RS22620 7cc849459ef1c6fe93cc440e9827a2ce 305 Pfam PF03547 Membrane transport protein 7 138 6.9E-9 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ATY42_RS22620 7cc849459ef1c6fe93cc440e9827a2ce 305 Pfam PF03547 Membrane transport protein 159 296 5.4E-15 T 11-11-2016 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ATY42_RS12075 8d1a2a327f4c92c7245a081c6065a5fa 186 Pfam PF11159 Protein of unknown function (DUF2939) 12 104 3.0E-25 T 11-11-2016 IPR021330 Protein of unknown function DUF2939 ATY42_RS15340 b996a901e7afd0d6d224fe85f93a64f4 403 Pfam PF13546 DDE superfamily endonuclease 1 255 2.7E-85 T 11-11-2016 ATY42_RS15340 b996a901e7afd0d6d224fe85f93a64f4 403 SUPERFAMILY SSF53098 20 367 9.86E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS14785 944cd507450d8ce7af2ea0ae79800d86 369 SUPERFAMILY SSF55120 5 352 3.16E-87 T 11-11-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS14785 944cd507450d8ce7af2ea0ae79800d86 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 198 351 3.1E-17 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS14785 944cd507450d8ce7af2ea0ae79800d86 369 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 18 169 2.5E-36 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS14785 944cd507450d8ce7af2ea0ae79800d86 369 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 11-11-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 ATY42_RS14785 944cd507450d8ce7af2ea0ae79800d86 369 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 357 28.445 T 11-11-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ATY42_RS11015 72f1f60af7fbf5b0a8bd73c355a82736 108 PIRSF PIRSF012508 5 106 4.7E-27 T 11-11-2016 IPR013368 TrpR homologue YerC/YecD ATY42_RS11015 72f1f60af7fbf5b0a8bd73c355a82736 108 Pfam PF01371 Trp repressor protein 16 100 3.0E-27 T 11-11-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 ATY42_RS11015 72f1f60af7fbf5b0a8bd73c355a82736 108 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 17 98 1.0E-13 T 11-11-2016 IPR013368 TrpR homologue YerC/YecD ATY42_RS11015 72f1f60af7fbf5b0a8bd73c355a82736 108 SUPERFAMILY SSF48295 17 100 8.37E-23 T 11-11-2016 IPR010921 Trp repressor/replication initiator GO:0043565 ATY42_RS11015 72f1f60af7fbf5b0a8bd73c355a82736 108 Gene3D G3DSA:1.10.1270.10 15 107 6.2E-35 T 11-11-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 ATY42_RS03880 c2741ebcacb4161a115b89339221e60f 214 SUPERFAMILY SSF159594 34 205 4.97E-43 T 11-11-2016 ATY42_RS03880 c2741ebcacb4161a115b89339221e60f 214 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 35 195 8.8E-35 T 11-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component ATY42_RS03880 c2741ebcacb4161a115b89339221e60f 214 Gene3D G3DSA:3.40.50.10610 22 211 2.5E-63 T 11-11-2016 IPR005586 ABC-type transport auxiliary lipoprotein component ATY42_RS06240 69661bcfd082aee63a550e6758f817ce 411 Pfam PF01610 Transposase 155 390 1.6E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS06240 69661bcfd082aee63a550e6758f817ce 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS19695 69661bcfd082aee63a550e6758f817ce 411 Pfam PF01610 Transposase 155 390 1.6E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS19695 69661bcfd082aee63a550e6758f817ce 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS14580 85334086d6b8c092e529ee7bf3d742e8 186 SUPERFAMILY SSF55021 10 93 1.08E-9 T 11-11-2016 ATY42_RS14580 85334086d6b8c092e529ee7bf3d742e8 186 PIRSF PIRSF028103 11 186 7.1E-69 T 11-11-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 ATY42_RS14580 85334086d6b8c092e529ee7bf3d742e8 186 Pfam PF13740 ACT domain 14 87 1.1E-13 T 11-11-2016 ATY42_RS14580 85334086d6b8c092e529ee7bf3d742e8 186 SUPERFAMILY SSF55021 97 185 4.58E-18 T 11-11-2016 ATY42_RS14580 85334086d6b8c092e529ee7bf3d742e8 186 Gene3D G3DSA:3.30.70.260 99 185 2.6E-19 T 11-11-2016 ATY42_RS14580 85334086d6b8c092e529ee7bf3d742e8 186 Gene3D G3DSA:3.30.70.260 31 94 5.6E-11 T 11-11-2016 ATY42_RS12085 fa19691f972979620b8eb685a18d7370 258 Gene3D G3DSA:2.60.200.30 113 230 3.6E-28 T 11-11-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ATY42_RS12085 fa19691f972979620b8eb685a18d7370 258 Pfam PF01513 ATP-NAD kinase 21 219 4.2E-16 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ATY42_RS12085 fa19691f972979620b8eb685a18d7370 258 Hamap MF_00361 NAD kinase [nadK]. 5 257 21.653 T 11-11-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ATY42_RS12085 fa19691f972979620b8eb685a18d7370 258 Gene3D G3DSA:3.40.50.10330 30 112 4.9E-16 T 11-11-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 ATY42_RS12085 fa19691f972979620b8eb685a18d7370 258 SUPERFAMILY SSF111331 29 245 5.76E-55 T 11-11-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain ATY42_RS03335 142cd1922be6a7b8ed7bbbe1fc975df0 193 Pfam PF11454 Protein of unknown function (DUF3016) 45 182 1.6E-51 T 11-11-2016 IPR021557 Protein of unknown function DUF3016 ATY42_RS14520 f30eb87cb9e82488a693996ea5635047 152 SUPERFAMILY SSF48208 6 123 4.93E-19 T 11-11-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 ATY42_RS03985 a8b317347316ebf0329cf572ced70ad3 281 Pfam PF13683 Integrase core domain 199 264 1.3E-27 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS03985 a8b317347316ebf0329cf572ced70ad3 281 SUPERFAMILY SSF53098 108 268 1.18E-36 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS03985 a8b317347316ebf0329cf572ced70ad3 281 Pfam PF13276 HTH-like domain 46 100 5.4E-7 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS03985 a8b317347316ebf0329cf572ced70ad3 281 Gene3D G3DSA:3.30.420.10 109 265 1.5E-41 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10845 a738b92a0a7f222b27d3b175ac8b5851 65 Pfam PF04024 PspC domain 6 62 7.9E-21 T 11-11-2016 IPR007168 Phage shock protein, PspC, N-terminal ATY42_RS10635 17bbf7ead61184e5fc69a8c3daf675fa 392 Gene3D G3DSA:1.25.40.10 45 291 2.1E-25 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS10635 17bbf7ead61184e5fc69a8c3daf675fa 392 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 390 35.065 T 11-11-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 ATY42_RS10635 17bbf7ead61184e5fc69a8c3daf675fa 392 Pfam PF13432 Tetratricopeptide repeat 116 167 0.0021 T 11-11-2016 ATY42_RS10635 17bbf7ead61184e5fc69a8c3daf675fa 392 SUPERFAMILY SSF81901 44 277 4.45E-17 T 11-11-2016 ATY42_RS01480 e44db9d9c2bf7ac2e47c6d59226e7d3a 149 SUPERFAMILY SSF52304 1 137 2.88E-19 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS01480 e44db9d9c2bf7ac2e47c6d59226e7d3a 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 3 134 2.0E-4 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS01480 e44db9d9c2bf7ac2e47c6d59226e7d3a 149 Gene3D G3DSA:3.40.50.9100 1 136 1.9E-16 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS01480 e44db9d9c2bf7ac2e47c6d59226e7d3a 149 PIRSF PIRSF001399 1 138 5.9E-4 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS07385 c43cc13e92efbf8767a41e2158cb10fa 168 Pfam PF01475 Ferric uptake regulator family 35 157 3.3E-10 T 11-11-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ATY42_RS07385 c43cc13e92efbf8767a41e2158cb10fa 168 SUPERFAMILY SSF46785 30 162 7.17E-27 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS07385 c43cc13e92efbf8767a41e2158cb10fa 168 Gene3D G3DSA:1.10.10.10 29 98 6.8E-9 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS15810 55552bd610798aa338e0e373ec3534bf 259 Pfam PF05598 Transposase domain (DUF772) 87 160 3.6E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS16205 20f30aa2cfb074ad3507a928a7d03a59 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 96 8.6E-23 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ATY42_RS16205 20f30aa2cfb074ad3507a928a7d03a59 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.628 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ATY42_RS20950 4b617efe0e88bec0eea2144de307df89 238 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 197 1.4E-25 T 11-11-2016 ATY42_RS20950 4b617efe0e88bec0eea2144de307df89 238 SUPERFAMILY SSF56784 13 218 5.19E-21 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS20950 4b617efe0e88bec0eea2144de307df89 238 Gene3D G3DSA:3.40.50.1000 97 231 1.3E-22 T 11-11-2016 IPR023214 HAD-like domain ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 Pfam PF00375 Sodium:dicarboxylate symporter family 3 406 3.7E-106 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 SUPERFAMILY SSF118215 3 406 3.92E-97 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 Gene3D G3DSA:1.10.3860.10 3 407 1.1E-101 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 PRINTS PR00173 Glutamate-aspartate symporter signature 334 353 6.6E-34 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 6.6E-34 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 PRINTS PR00173 Glutamate-aspartate symporter signature 151 173 6.6E-34 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 PRINTS PR00173 Glutamate-aspartate symporter signature 299 325 6.6E-34 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 PRINTS PR00173 Glutamate-aspartate symporter signature 361 381 6.6E-34 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS05725 849b007fcdc5a9def4e22b2d7cfc36ac 409 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 6.6E-34 T 11-11-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ATY42_RS19150 dffa6dd886389f72027438e2de80f2cb 311 SUPERFAMILY SSF51735 7 173 2.11E-34 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19150 dffa6dd886389f72027438e2de80f2cb 311 Gene3D G3DSA:3.40.50.720 7 189 1.8E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS19150 dffa6dd886389f72027438e2de80f2cb 311 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 116 5.6E-17 T 11-11-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 ATY42_RS14870 6ce18297523c0197ef55e3a2ddfa8562 222 PIRSF PIRSF033239 13 202 3.7E-39 T 11-11-2016 IPR010331 Exopolysaccharide synthesis, ExoD ATY42_RS14870 6ce18297523c0197ef55e3a2ddfa8562 222 Pfam PF06055 Exopolysaccharide synthesis, ExoD 26 197 1.9E-42 T 11-11-2016 IPR010331 Exopolysaccharide synthesis, ExoD ATY42_RS19350 f4e555f6722c9fb4e1512658e0bf5e5a 209 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 10 194 32.273 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATY42_RS19350 f4e555f6722c9fb4e1512658e0bf5e5a 209 Pfam PF02669 K+-transporting ATPase, c chain 16 193 5.3E-64 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATY42_RS19350 f4e555f6722c9fb4e1512658e0bf5e5a 209 PIRSF PIRSF001296 10 198 1.3E-69 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATY42_RS19350 f4e555f6722c9fb4e1512658e0bf5e5a 209 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 16 193 7.4E-52 T 11-11-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ATY42_RS10100 3087d9720e16e586f4b7c0dd88e4c92a 46 Gene3D G3DSA:1.20.140.10 17 41 9.3E-4 T 11-11-2016 ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 SMART SM00825 Beta-ketoacyl synthase 4 399 2.1E-7 T 11-11-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 SUPERFAMILY SSF53901 212 398 2.64E-47 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 SUPERFAMILY SSF53901 1 241 3.84E-31 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 249 356 1.5E-27 T 11-11-2016 IPR014031 Beta-ketoacyl synthase, C-terminal ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 73 238 1.1E-19 T 11-11-2016 IPR014030 Beta-ketoacyl synthase, N-terminal ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 Gene3D G3DSA:3.40.47.10 254 398 2.1E-49 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 11-11-2016 IPR018201 Beta-ketoacyl synthase, active site ATY42_RS02160 b3c12a56d69f123402cdd4bf04641b69 399 Gene3D G3DSA:3.40.47.10 2 241 1.7E-26 T 11-11-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 ATY42_RS11305 a8fb642c67e322d580985f6f0f2909b6 332 Pfam PF12762 ISXO2-like transposase domain 148 293 7.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS11305 a8fb642c67e322d580985f6f0f2909b6 332 Pfam PF12760 Transposase zinc-ribbon domain 34 80 8.0E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS11305 a8fb642c67e322d580985f6f0f2909b6 332 SMART SM01126 148 293 4.2E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00870 a8f43613d1200b7d17bb52a6ab0e5aa2 70 Pfam PF00872 Transposase, Mutator family 15 67 2.1E-5 T 11-11-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ATY42_RS08415 96de2d7113dd53978322b762eb8b02f2 480 SUPERFAMILY SSF48452 222 318 1.99E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08415 96de2d7113dd53978322b762eb8b02f2 480 SUPERFAMILY SSF48452 139 171 1.99E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08415 96de2d7113dd53978322b762eb8b02f2 480 Gene3D G3DSA:1.25.40.10 132 183 6.8E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08415 96de2d7113dd53978322b762eb8b02f2 480 Gene3D G3DSA:1.25.40.10 52 79 6.8E-5 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08415 96de2d7113dd53978322b762eb8b02f2 480 Gene3D G3DSA:1.25.40.10 232 314 5.4E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS08415 96de2d7113dd53978322b762eb8b02f2 480 Gene3D G3DSA:1.25.40.10 430 465 5.4E-4 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS12545 79fd16ffc34c7b4214ad0adff29a3646 212 Gene3D G3DSA:1.25.40.10 80 182 1.8E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS12545 79fd16ffc34c7b4214ad0adff29a3646 212 Pfam PF09976 Tetratricopeptide repeat-like domain 17 202 1.1E-39 T 11-11-2016 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038 ATY42_RS12545 79fd16ffc34c7b4214ad0adff29a3646 212 SUPERFAMILY SSF48452 94 183 1.38E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS05250 5d0cdf5ca53b75e3ad5f7c472d5b1bc1 88 Pfam PF14487 Domain of unknown function (DUF4433) 3 87 9.9E-19 T 11-11-2016 IPR029494 Domain of unknown function DUF4433 ATY42_RS13075 8cf176905c86219d6ed4498b3fe3c9c2 250 SUPERFAMILY SSF111369 70 249 9.55E-30 T 11-11-2016 ATY42_RS13075 8cf176905c86219d6ed4498b3fe3c9c2 250 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 50 250 3.5E-55 T 11-11-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 ATY42_RS13075 8cf176905c86219d6ed4498b3fe3c9c2 250 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 250 2.4E-24 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS13075 8cf176905c86219d6ed4498b3fe3c9c2 250 Gene3D G3DSA:2.40.50.100 76 108 7.2E-19 T 11-11-2016 ATY42_RS13075 8cf176905c86219d6ed4498b3fe3c9c2 250 Gene3D G3DSA:2.40.50.100 169 202 7.2E-19 T 11-11-2016 ATY42_RS20085 a9cff866af943fcc43e8094f060b381f 394 Gene3D G3DSA:3.40.640.10 57 275 5.1E-60 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS20085 a9cff866af943fcc43e8094f060b381f 394 SUPERFAMILY SSF53383 12 392 3.81E-94 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS20085 a9cff866af943fcc43e8094f060b381f 394 Gene3D G3DSA:3.90.1150.10 276 393 7.7E-29 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS20085 a9cff866af943fcc43e8094f060b381f 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 11-11-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ATY42_RS20085 a9cff866af943fcc43e8094f060b381f 394 Pfam PF00155 Aminotransferase class I and II 39 387 6.4E-51 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS18725 42295d030b8fb6e84f5d3a4a7fae4701 246 SUPERFAMILY SSF103481 38 131 8.5E-7 T 11-11-2016 ATY42_RS12515 a2c8ff0a1afba3ed779c56adc53702aa 77 Pfam PF13358 DDE superfamily endonuclease 6 58 4.6E-11 T 11-11-2016 ATY42_RS01130 34b5cfd3bfe6031328990024d3f64e45 67 Pfam PF04325 Protein of unknown function (DUF465) 14 58 5.7E-13 T 11-11-2016 IPR007420 Protein of unknown function DUF465 ATY42_RS01450 ab8972cfa2eaccd3cf66ba668bddc689 404 Pfam PF01609 Transposase DDE domain 89 329 1.7E-25 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS01450 ab8972cfa2eaccd3cf66ba668bddc689 404 SUPERFAMILY SSF53098 14 367 1.14E-30 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10855 4d83570cfa74417c9707963527eb44e5 403 Gene3D G3DSA:3.50.50.60 18 119 5.0E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS10855 4d83570cfa74417c9707963527eb44e5 403 Gene3D G3DSA:3.50.50.60 170 252 5.0E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS10855 4d83570cfa74417c9707963527eb44e5 403 Gene3D G3DSA:3.50.50.60 345 399 5.0E-40 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS10855 4d83570cfa74417c9707963527eb44e5 403 Pfam PF01266 FAD dependent oxidoreductase 31 380 3.3E-46 T 11-11-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ATY42_RS10855 4d83570cfa74417c9707963527eb44e5 403 SUPERFAMILY SSF51905 29 252 1.68E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS10855 4d83570cfa74417c9707963527eb44e5 403 SUPERFAMILY SSF51905 345 393 1.68E-33 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS05170 e1506b765372ea185963d24e9d042d6c 318 Pfam PF01882 Protein of unknown function DUF58 211 288 9.5E-15 T 11-11-2016 IPR002881 Domain of unknown function DUF58 ATY42_RS05265 f0366b06bb985eaaf34508e47142966f 258 Gene3D G3DSA:3.20.20.370 45 252 5.1E-46 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS05265 f0366b06bb985eaaf34508e47142966f 258 SUPERFAMILY SSF88713 66 252 4.7E-49 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATY42_RS05265 f0366b06bb985eaaf34508e47142966f 258 Pfam PF01522 Polysaccharide deacetylase 75 193 3.7E-30 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS22085 a71dd7a1ff2c118c6c3481d9d5b3278c 97 Pfam PF00005 ABC transporter 12 50 2.7E-11 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS22085 a71dd7a1ff2c118c6c3481d9d5b3278c 97 Gene3D G3DSA:3.40.50.300 4 92 3.6E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS22085 a71dd7a1ff2c118c6c3481d9d5b3278c 97 SUPERFAMILY SSF52540 3 91 7.73E-28 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS05440 ebc411db133bbe274d79e6c043572f73 247 Gene3D G3DSA:3.30.420.10 122 246 5.7E-25 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS05440 ebc411db133bbe274d79e6c043572f73 247 Pfam PF13276 HTH-like domain 48 103 8.2E-17 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS05440 ebc411db133bbe274d79e6c043572f73 247 Pfam PF00665 Integrase core domain 128 244 1.3E-23 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS05440 ebc411db133bbe274d79e6c043572f73 247 SUPERFAMILY SSF53098 122 246 4.25E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06275 c7767b6c3da116cf68bdeb79006fea31 130 Gene3D G3DSA:3.40.50.510 4 124 3.1E-26 T 11-11-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ATY42_RS06275 c7767b6c3da116cf68bdeb79006fea31 130 SUPERFAMILY SSF53062 4 124 2.88E-23 T 11-11-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ATY42_RS06275 c7767b6c3da116cf68bdeb79006fea31 130 Pfam PF03610 PTS system fructose IIA component 4 103 4.2E-12 T 11-11-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ATY42_RS03915 f1db00609ae6b1d714ee80f19d93b102 134 Pfam PF13511 Domain of unknown function (DUF4124) 10 64 1.3E-12 T 11-11-2016 IPR025392 Domain of unknown function DUF4124 ATY42_RS00790 977abc7405c27491b3e43d41f2b7ff42 149 Pfam PF13936 Helix-turn-helix domain 6 47 6.6E-15 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS10505 5714507a4f0ee067369b86512071724b 272 SUPERFAMILY SSF50969 41 269 4.71E-21 T 11-11-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like ATY42_RS10505 5714507a4f0ee067369b86512071724b 272 Gene3D G3DSA:2.130.10.10 79 268 3.7E-12 T 11-11-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 ATY42_RS10505 5714507a4f0ee067369b86512071724b 272 Pfam PF05096 Glutamine cyclotransferase 40 270 1.9E-93 T 11-11-2016 IPR007788 Glutamine cyclotransferase ATY42_RS11050 7d264836e18554b8b56053b403b86364 258 SUPERFAMILY SSF51366 1 255 1.1E-70 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS11050 7d264836e18554b8b56053b403b86364 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 255 43.613 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ATY42_RS11050 7d264836e18554b8b56053b403b86364 258 Gene3D G3DSA:3.20.20.70 4 255 6.8E-83 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS11050 7d264836e18554b8b56053b403b86364 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 255 9.6E-101 T 11-11-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ATY42_RS11050 7d264836e18554b8b56053b403b86364 258 Pfam PF00977 Histidine biosynthesis protein 5 238 1.1E-71 T 11-11-2016 IPR006062 Histidine biosynthesis GO:0000105 ATY42_RS10640 57d744d79052c2f528daf982b0482e6c 322 Pfam PF00953 Glycosyl transferase family 4 77 210 2.0E-23 T 11-11-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ATY42_RS08800 424fe879ecabed94eccbb6e8480a94d5 104 SUPERFAMILY SSF54631 2 102 7.99E-26 T 11-11-2016 ATY42_RS08800 424fe879ecabed94eccbb6e8480a94d5 104 Gene3D G3DSA:3.10.580.10 1 89 2.1E-24 T 11-11-2016 ATY42_RS08800 424fe879ecabed94eccbb6e8480a94d5 104 SMART SM00116 41 88 2.7E-13 T 11-11-2016 IPR000644 CBS domain ATY42_RS08800 424fe879ecabed94eccbb6e8480a94d5 104 Pfam PF00571 CBS domain 34 87 8.8E-16 T 11-11-2016 IPR000644 CBS domain ATY42_RS12805 be0d13f5612eeb7a1276bfba09107b49 137 PIRSF PIRSF039090 3 137 1.7E-47 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 ATY42_RS12805 be0d13f5612eeb7a1276bfba09107b49 137 TIGRFAM TIGR00208 fliS: flagellar protein FliS 12 126 1.8E-26 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 ATY42_RS12805 be0d13f5612eeb7a1276bfba09107b49 137 SUPERFAMILY SSF101116 11 127 1.09E-34 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 ATY42_RS12805 be0d13f5612eeb7a1276bfba09107b49 137 Gene3D G3DSA:1.20.120.340 10 131 7.4E-41 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 ATY42_RS12805 be0d13f5612eeb7a1276bfba09107b49 137 Pfam PF02561 Flagellar protein FliS 10 126 2.8E-35 T 11-11-2016 IPR003713 Flagellar protein FliS GO:0044780 ATY42_RS13315 f684dd12937fb63a2c10aeb3f959ddef 162 Gene3D G3DSA:2.30.110.10 5 155 1.1E-49 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS13315 f684dd12937fb63a2c10aeb3f959ddef 162 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 141 5.4E-31 T 11-11-2016 ATY42_RS13315 f684dd12937fb63a2c10aeb3f959ddef 162 SUPERFAMILY SSF50475 6 135 3.05E-24 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS03885 30397ad06150ddbd33190188e35df811 308 Pfam PF02470 MlaD protein 39 115 5.0E-14 T 11-11-2016 IPR003399 Mce/MlaD ATY42_RS04365 9d453ef1d59d43469e3c4671c015ea99 320 Gene3D G3DSA:3.30.420.10 161 306 4.5E-11 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04365 9d453ef1d59d43469e3c4671c015ea99 320 SUPERFAMILY SSF53098 161 306 1.18E-23 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS04365 9d453ef1d59d43469e3c4671c015ea99 320 Pfam PF00665 Integrase core domain 161 263 9.6E-9 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS21355 3e4d54934ca6b6774d0eab3845f81294 312 SUPERFAMILY SSF53474 5 128 2.4E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS21355 3e4d54934ca6b6774d0eab3845f81294 312 Pfam PF01764 Lipase (class 3) 62 91 5.5E-6 T 11-11-2016 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 ATY42_RS21355 3e4d54934ca6b6774d0eab3845f81294 312 Gene3D G3DSA:3.40.50.1820 5 141 2.1E-15 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05045 47edb16cdaa11357e58a1b3b022e47b8 716 Gene3D G3DSA:3.40.50.1820 345 371 1.3E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05045 47edb16cdaa11357e58a1b3b022e47b8 716 Gene3D G3DSA:3.40.50.1820 208 279 1.3E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05045 47edb16cdaa11357e58a1b3b022e47b8 716 Gene3D G3DSA:3.40.50.1820 33 74 1.3E-7 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05045 47edb16cdaa11357e58a1b3b022e47b8 716 SUPERFAMILY SSF53474 197 282 2.76E-9 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS05045 47edb16cdaa11357e58a1b3b022e47b8 716 Pfam PF11678 Protein of unknown function (DUF3274) 400 691 4.0E-70 T 11-11-2016 IPR021692 Protein of unknown function DUF3274 ATY42_RS06335 3310b7f673e06a52a7503f73d25036bc 424 Gene3D G3DSA:3.65.10.10 227 422 7.6E-61 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ATY42_RS06335 3310b7f673e06a52a7503f73d25036bc 424 Gene3D G3DSA:3.65.10.10 21 226 3.5E-68 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ATY42_RS06335 3310b7f673e06a52a7503f73d25036bc 424 SUPERFAMILY SSF55205 1 422 1.83E-143 T 11-11-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ATY42_RS06335 3310b7f673e06a52a7503f73d25036bc 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 422 2.5E-176 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS06335 3310b7f673e06a52a7503f73d25036bc 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 413 2.0E-113 T 11-11-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 ATY42_RS06335 3310b7f673e06a52a7503f73d25036bc 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 423 47.349 T 11-11-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS22560 5f4ed484ec44f38ebbfda703f31ec865 268 Pfam PF14302 Domain of unknown function (DUF4377) 188 265 2.1E-14 T 11-11-2016 IPR025485 Domain of unknown function DUF4377 ATY42_RS22560 5f4ed484ec44f38ebbfda703f31ec865 268 Pfam PF03724 META domain 52 166 7.7E-15 T 11-11-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ ATY42_RS08805 35265dc4a2ff01297d30ae9752eca4cb 342 Pfam PF05170 AsmA family 9 175 4.6E-9 T 11-11-2016 IPR007844 AsmA ATY42_RS20405 9a25dcf87a5fd090492cc6fa6e766f81 225 Gene3D G3DSA:3.40.50.1010 3 72 7.6E-35 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS20405 9a25dcf87a5fd090492cc6fa6e766f81 225 Gene3D G3DSA:3.40.50.1010 122 211 7.6E-35 T 11-11-2016 IPR029060 PIN domain-like ATY42_RS20405 9a25dcf87a5fd090492cc6fa6e766f81 225 Pfam PF01936 NYN domain 4 192 1.6E-10 T 11-11-2016 IPR021139 NYN domain, limkain-b1-type ATY42_RS00685 e24245cf82de96a19c7c2eadc8e53ca1 436 Pfam PF02687 FtsX-like permease family 308 427 4.7E-12 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ATY42_RS00685 e24245cf82de96a19c7c2eadc8e53ca1 436 Pfam PF12704 MacB-like periplasmic core domain 70 274 7.2E-12 T 11-11-2016 IPR025857 MacB-like periplasmic core domain ATY42_RS05505 8a1642ddb15beb02db83720dce8a95f5 73 TIGRFAM TIGR02449 TIGR02449: TIGR02449 family protein 9 73 2.2E-30 T 11-11-2016 IPR012662 Conserved hypothetical protein CHP02449 ATY42_RS02775 8e97a4ea4354fa4c0004383b06b5ac77 424 Pfam PF14237 Domain of unknown function (DUF4339) 4 48 4.2E-15 T 11-11-2016 IPR025640 Domain of unknown function DUF4339 ATY42_RS02775 8e97a4ea4354fa4c0004383b06b5ac77 424 Gene3D G3DSA:3.30.1490.40 3 55 1.1E-5 T 11-11-2016 IPR003169 GYF domain GO:0005515 ATY42_RS02775 8e97a4ea4354fa4c0004383b06b5ac77 424 Pfam PF06271 RDD family 222 369 1.1E-21 T 11-11-2016 IPR010432 RDD ATY42_RS02775 8e97a4ea4354fa4c0004383b06b5ac77 424 SUPERFAMILY SSF55277 2 51 4.32E-5 T 11-11-2016 IPR003169 GYF domain GO:0005515 ATY42_RS03490 369be20277b67d9a48db1f788ab64f7f 270 Gene3D G3DSA:2.40.160.20 13 228 1.1E-4 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS03490 369be20277b67d9a48db1f788ab64f7f 270 SUPERFAMILY SSF69917 130 249 5.75E-5 T 11-11-2016 IPR020080 Outer membrane adhesin/peptidase omptin GO:0004190 ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 SUPERFAMILY SSF51735 14 255 2.29E-74 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.7E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 1.7E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.7E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.7E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.7E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.7E-38 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 6.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.1E-9 T 11-11-2016 IPR002347 Short-chain dehydrogenase/reductase SDR ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-11-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 Gene3D G3DSA:3.40.50.720 12 255 3.0E-79 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS22785 24ed40925ddcf949321d37b6be606dad 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 23 255 6.4E-63 T 11-11-2016 ATY42_RS22505 4899e7456a1d7be13888e65e152559c6 178 SUPERFAMILY SSF88874 1 172 3.79E-45 T 11-11-2016 ATY42_RS22505 4899e7456a1d7be13888e65e152559c6 178 Gene3D G3DSA:3.90.1340.10 1 65 2.6E-22 T 11-11-2016 IPR011083 Phage tail collar domain ATY42_RS22505 4899e7456a1d7be13888e65e152559c6 178 Pfam PF07484 Phage Tail Collar Domain 7 61 1.9E-19 T 11-11-2016 IPR011083 Phage tail collar domain ATY42_RS09620 e65fa265378d3c8383dad1261523104b 344 Pfam PF05229 Spore Coat Protein U domain 26 169 4.5E-18 T 11-11-2016 IPR007893 Spore coat protein U ATY42_RS09620 e65fa265378d3c8383dad1261523104b 344 Pfam PF05229 Spore Coat Protein U domain 210 340 6.1E-34 T 11-11-2016 IPR007893 Spore coat protein U ATY42_RS09620 e65fa265378d3c8383dad1261523104b 344 SMART SM00972 283 341 4.7E-21 T 11-11-2016 IPR007893 Spore coat protein U ATY42_RS09620 e65fa265378d3c8383dad1261523104b 344 SMART SM00972 103 172 5.0E-12 T 11-11-2016 IPR007893 Spore coat protein U ATY42_RS04495 4c9b23c614dc4ae4cab85d07783a8651 87 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 5 84 1.0E-12 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS04495 4c9b23c614dc4ae4cab85d07783a8651 87 Gene3D G3DSA:3.30.70.270 5 84 1.8E-18 T 11-11-2016 ATY42_RS04495 4c9b23c614dc4ae4cab85d07783a8651 87 Pfam PF00990 Diguanylate cyclase, GGDEF domain 5 83 1.1E-11 T 11-11-2016 IPR000160 GGDEF domain ATY42_RS04495 4c9b23c614dc4ae4cab85d07783a8651 87 SUPERFAMILY SSF55073 5 84 1.41E-15 T 11-11-2016 IPR029787 Nucleotide cyclase ATY42_RS14525 89546b188413c72dc8123794e51e46c0 262 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 49 220 8.3E-60 T 11-11-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 ATY42_RS14525 89546b188413c72dc8123794e51e46c0 262 Gene3D G3DSA:2.70.98.50 48 226 8.4E-61 T 11-11-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 ATY42_RS20620 11e82fc4786f8af754e873bb03c6f052 65 Pfam PF14255 Cysteine-rich CPXCG 10 59 1.8E-22 T 11-11-2016 IPR025990 Cysteine-rich CPXCG protein ATY42_RS20620 11e82fc4786f8af754e873bb03c6f052 65 PIRSF PIRSF037225 2 65 1.1E-29 T 11-11-2016 IPR017143 Uncharacterised conserved protein UCP037225 ATY42_RS03085 193208ef58cb14e0c62fabb155d0cc81 469 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 434 4.4E-147 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ATY42_RS03085 193208ef58cb14e0c62fabb155d0cc81 469 PIRSF PIRSF006446 1 456 1.8E-178 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ATY42_RS22340 57835b8b34dc1f914409aad105cf1bda 226 Gene3D G3DSA:1.10.357.10 12 207 5.2E-25 T 11-11-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 ATY42_RS22340 57835b8b34dc1f914409aad105cf1bda 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 71 5.4E-8 T 11-11-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ATY42_RS22340 57835b8b34dc1f914409aad105cf1bda 226 SUPERFAMILY SSF46689 20 79 1.8E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS16525 823949413f14cbf17bb29515b32c8a9c 249 Pfam PF00877 NlpC/P60 family 139 247 1.4E-29 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain ATY42_RS16525 823949413f14cbf17bb29515b32c8a9c 249 SUPERFAMILY SSF54001 121 248 4.91E-40 T 11-11-2016 ATY42_RS16525 823949413f14cbf17bb29515b32c8a9c 249 Gene3D G3DSA:3.90.1720.10 119 249 5.4E-45 T 11-11-2016 IPR000064 Endopeptidase, NLPC/P60 domain ATY42_RS06860 d6f0a42c451f23f81d178d449b134af5 109 Pfam PF00355 Rieske [2Fe-2S] domain 4 95 5.0E-15 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS06860 d6f0a42c451f23f81d178d449b134af5 109 Gene3D G3DSA:2.102.10.10 2 106 6.0E-29 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS06860 d6f0a42c451f23f81d178d449b134af5 109 SUPERFAMILY SSF50022 4 106 3.14E-25 T 11-11-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ATY42_RS10580 4a1b7a01fd23e1cf798a5eb79b2ed1d2 410 Pfam PF01963 TraB family 25 246 4.6E-24 T 11-11-2016 IPR002816 Pheromone shutdown, TraB ATY42_RS10580 4a1b7a01fd23e1cf798a5eb79b2ed1d2 410 TIGRFAM TIGR00261 traB: TraB family protein 32 407 8.1E-77 T 11-11-2016 IPR005230 Pheromone shutdown, TraB, bacterial/archaeal ATY42_RS22045 56a4a32c53bd6381c208b27009f34f6c 172 SUPERFAMILY SSF46626 54 169 1.86E-16 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS22045 56a4a32c53bd6381c208b27009f34f6c 172 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 90 167 1.0E-11 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS22045 56a4a32c53bd6381c208b27009f34f6c 172 Gene3D G3DSA:1.10.760.10 89 169 1.1E-23 T 11-11-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 ATY42_RS12615 b809f2af2b84f50a9b8e77f21f5e967d 223 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 47 211 9.8E-53 T 11-11-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like ATY42_RS12615 b809f2af2b84f50a9b8e77f21f5e967d 223 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 22 221 31.355 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ATY42_RS12615 b809f2af2b84f50a9b8e77f21f5e967d 223 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 19 218 2.4E-21 T 11-11-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 ATY42_RS12615 b809f2af2b84f50a9b8e77f21f5e967d 223 Gene3D G3DSA:2.50.20.10 38 219 6.3E-54 T 11-11-2016 ATY42_RS12615 b809f2af2b84f50a9b8e77f21f5e967d 223 SUPERFAMILY SSF89392 38 219 2.98E-43 T 11-11-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX ATY42_RS12920 9c783258ca8cc9bb0d09e0c13fb9328b 424 PRINTS PR01007 Flagellar hook-length control protein signature 190 213 1.0E-6 T 11-11-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 ATY42_RS12920 9c783258ca8cc9bb0d09e0c13fb9328b 424 PRINTS PR01007 Flagellar hook-length control protein signature 352 375 1.0E-6 T 11-11-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 ATY42_RS12920 9c783258ca8cc9bb0d09e0c13fb9328b 424 Pfam PF02120 Flagellar hook-length control protein FliK 305 384 1.4E-23 T 11-11-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal ATY42_RS01680 e8903471d586f26a7d14281fbb57e88b 353 Pfam PF13546 DDE superfamily endonuclease 4 205 2.6E-67 T 11-11-2016 ATY42_RS01680 e8903471d586f26a7d14281fbb57e88b 353 SUPERFAMILY SSF53098 182 317 5.23E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS01680 e8903471d586f26a7d14281fbb57e88b 353 SUPERFAMILY SSF53098 14 153 5.23E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS17685 13fbb3fbaa3dc1c2acd0b5f08b686fa5 1245 Pfam PF14331 ImcF-related N-terminal domain 189 439 6.5E-83 T 11-11-2016 IPR025743 ImcF-related, N-terminal domain ATY42_RS17685 13fbb3fbaa3dc1c2acd0b5f08b686fa5 1245 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 40 1177 8.9E-205 T 11-11-2016 IPR017731 Type VI secretion system, IcmF ATY42_RS17685 13fbb3fbaa3dc1c2acd0b5f08b686fa5 1245 Pfam PF06761 Intracellular multiplication and human macrophage-killing 493 832 8.7E-79 T 11-11-2016 IPR009612 ImcF-related ATY42_RS17685 13fbb3fbaa3dc1c2acd0b5f08b686fa5 1245 Pfam PF06744 Type VI secretion protein IcmF C-terminal 965 1160 1.8E-41 T 11-11-2016 IPR010623 Type VI secretion system IcmF, C-terminal ATY42_RS17685 13fbb3fbaa3dc1c2acd0b5f08b686fa5 1245 SUPERFAMILY SSF52540 123 269 1.6E-7 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS17650 cce3038bbd8b11c07b2b38f778873197 319 Gene3D G3DSA:3.90.1580.10 43 316 5.4E-43 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS17650 cce3038bbd8b11c07b2b38f778873197 319 Pfam PF03781 Sulfatase-modifying factor enzyme 1 51 252 1.3E-35 T 11-11-2016 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 ATY42_RS17650 cce3038bbd8b11c07b2b38f778873197 319 SUPERFAMILY SSF56436 53 315 5.18E-42 T 11-11-2016 IPR016187 C-type lectin fold ATY42_RS07855 4a8b8a9a10b7058e9889ef9a55151c56 174 Pfam PF13761 Domain of unknown function (DUF4166) 16 171 3.6E-33 T 11-11-2016 IPR025311 Domain of unknown function DUF4166 ATY42_RS14930 596016efb35b1dc9f4548d016d29d63e 376 SUPERFAMILY SSF53756 29 366 3.32E-44 T 11-11-2016 ATY42_RS14930 596016efb35b1dc9f4548d016d29d63e 376 Pfam PF00534 Glycosyl transferases group 1 183 343 3.4E-16 T 11-11-2016 IPR001296 Glycosyl transferase, family 1 ATY42_RS14930 596016efb35b1dc9f4548d016d29d63e 376 Pfam PF13439 Glycosyltransferase Family 4 30 140 7.7E-7 T 11-11-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ATY42_RS14930 596016efb35b1dc9f4548d016d29d63e 376 Gene3D G3DSA:3.40.50.2000 174 342 2.5E-18 T 11-11-2016 ATY42_RS17620 b0c0e2c1d1c7f4fb5967facfcc89d0b2 298 Pfam PF13503 Domain of unknown function (DUF4123) 4 126 9.1E-18 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS15640 915db96c047b7966764707e86f1fc91c 143 Gene3D G3DSA:2.170.130.10 48 133 1.1E-12 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS15640 915db96c047b7966764707e86f1fc91c 143 SUPERFAMILY SSF56935 48 133 1.79E-11 T 11-11-2016 ATY42_RS15640 915db96c047b7966764707e86f1fc91c 143 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 133 8.4E-8 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS03025 b501aad9a94d69e87a5a53fd8c469fe4 422 Pfam PF12040 Domain of unknown function (DUF3526) 274 415 5.4E-37 T 11-11-2016 IPR021913 Protein of unknown function DUF3526 ATY42_RS10160 6e62c33e9abd7af845ed3474f0aa74a9 375 Pfam PF13546 DDE superfamily endonuclease 1 227 5.8E-76 T 11-11-2016 ATY42_RS10160 6e62c33e9abd7af845ed3474f0aa74a9 375 SUPERFAMILY SSF53098 7 339 8.34E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10435 621479586f909e334629e0b37af91a5b 623 Pfam PF13387 Domain of unknown function (DUF4105) 234 398 5.8E-28 T 11-11-2016 IPR025178 Domain of unknown function DUF4105 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 3.5E-56 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-11-2016 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 Gene3D G3DSA:2.40.150.20 1 122 1.6E-56 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.116 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 SMART SM01374 1 122 4.2E-87 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 SUPERFAMILY SSF50193 1 122 7.72E-53 T 11-11-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ATY42_RS17995 23f198f6eba1e56db41b6c18b62c29dd 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.4E-59 T 11-11-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ATY42_RS13860 40348b413d0b8a9b7b25f96eccfe427c 284 SUPERFAMILY SSF109709 156 217 3.27E-5 T 11-11-2016 ATY42_RS13860 40348b413d0b8a9b7b25f96eccfe427c 284 Gene3D G3DSA:1.20.5.170 223 283 1.7E-5 T 11-11-2016 ATY42_RS03010 d669ef84c74e4ad9c97932b332ec6859 62 Pfam PF13683 Integrase core domain 10 45 3.9E-11 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS03010 d669ef84c74e4ad9c97932b332ec6859 62 Gene3D G3DSA:3.30.420.10 9 46 8.9E-6 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10370 c1b2e9e59aec7fd8d740c9f1dbd2a2ae 403 SUPERFAMILY SSF53098 22 367 1.67E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS10370 c1b2e9e59aec7fd8d740c9f1dbd2a2ae 403 Pfam PF13546 DDE superfamily endonuclease 1 255 1.2E-85 T 11-11-2016 ATY42_RS23155 87bb063a73c8ba671e0132b20b681873 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 309 326 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS23155 87bb063a73c8ba671e0132b20b681873 453 Gene3D G3DSA:1.20.1250.20 32 226 1.9E-21 T 11-11-2016 ATY42_RS23155 87bb063a73c8ba671e0132b20b681873 453 Gene3D G3DSA:1.20.1250.20 252 437 2.2E-12 T 11-11-2016 ATY42_RS23155 87bb063a73c8ba671e0132b20b681873 453 SUPERFAMILY SSF103473 28 434 2.62E-52 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS23155 87bb063a73c8ba671e0132b20b681873 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS23155 87bb063a73c8ba671e0132b20b681873 453 Pfam PF00083 Sugar (and other) transporter 33 438 2.5E-31 T 11-11-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ATY42_RS09065 5cac2af167b2b9700b61bb841d86a1ae 76 Gene3D G3DSA:3.50.50.60 6 72 3.0E-9 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS09065 5cac2af167b2b9700b61bb841d86a1ae 76 SUPERFAMILY SSF51905 6 74 2.96E-12 T 11-11-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 Pfam PF00654 Voltage gated chloride channel 71 414 3.6E-81 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 PRINTS PR00762 Chloride channel signature 382 401 2.0E-29 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 PRINTS PR00762 Chloride channel signature 82 99 2.0E-29 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 PRINTS PR00762 Chloride channel signature 116 135 2.0E-29 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 PRINTS PR00762 Chloride channel signature 168 187 2.0E-29 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 PRINTS PR00762 Chloride channel signature 335 355 2.0E-29 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 PRINTS PR00762 Chloride channel signature 364 380 2.0E-29 T 11-11-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 Gene3D G3DSA:1.10.3080.10 17 425 4.0E-73 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS07550 bbc0c023146dbde96a78505001721f9a 464 SUPERFAMILY SSF81340 10 427 1.23E-90 T 11-11-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 ATY42_RS19625 9618b0e9aa40ba9d09e115d80e7f36d7 269 SUPERFAMILY SSF53098 39 260 3.57E-14 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS19625 9618b0e9aa40ba9d09e115d80e7f36d7 269 Pfam PF13546 DDE superfamily endonuclease 39 267 2.1E-81 T 11-11-2016 ATY42_RS06360 560b90de5098a212b20812a6cfe7c556 205 PIRSF PIRSF020606 1 205 4.0E-49 T 11-11-2016 IPR014509 Uncharacterised conserved protein UCP020606 ATY42_RS06360 560b90de5098a212b20812a6cfe7c556 205 Pfam PF09997 Predicted membrane protein (DUF2238) 37 186 1.5E-47 T 11-11-2016 IPR014509 Uncharacterised conserved protein UCP020606 ATY42_RS22055 8953fc21d3015413c836a42c8aec2a14 128 Pfam PF03203 MerC mercury resistance protein 9 118 3.2E-21 T 11-11-2016 IPR004891 MerC mercury resistance protein ATY42_RS11895 41d1fe9389cd2bea40b7728893b60a41 456 SUPERFAMILY SSF51338 365 453 1.26E-10 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS11895 41d1fe9389cd2bea40b7728893b60a41 456 Gene3D G3DSA:2.30.40.10 22 67 3.7E-4 T 11-11-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 ATY42_RS11895 41d1fe9389cd2bea40b7728893b60a41 456 TIGRFAM TIGR02022 hutF: formiminoglutamate deiminase 6 454 2.5E-212 T 11-11-2016 IPR010252 Formiminoglutamate deiminase ATY42_RS11895 41d1fe9389cd2bea40b7728893b60a41 456 Pfam PF01979 Amidohydrolase family 51 430 1.4E-29 T 11-11-2016 IPR006680 Amidohydrolase-related GO:0016787 ATY42_RS11895 41d1fe9389cd2bea40b7728893b60a41 456 SUPERFAMILY SSF51556 54 378 2.04E-70 T 11-11-2016 IPR032466 Metal-dependent hydrolase ATY42_RS11895 41d1fe9389cd2bea40b7728893b60a41 456 Gene3D G3DSA:3.20.20.140 68 397 4.2E-70 T 11-11-2016 ATY42_RS19960 680e9846557254ff4f856ef4df480d73 452 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 18 276 1.4E-49 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 ATY42_RS19960 680e9846557254ff4f856ef4df480d73 452 Pfam PF04085 rod shape-determining protein MreC 133 274 2.2E-33 T 11-11-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 ATY42_RS01475 27d5ec750d929cd5a8d696c7f9cfc9a2 142 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 12 124 0.008 T 11-11-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ATY42_RS18545 d0509875ec4a5d177a42cb9d1908aa93 716 Gene3D G3DSA:2.40.10.10 639 696 1.6E-14 T 11-11-2016 ATY42_RS18545 d0509875ec4a5d177a42cb9d1908aa93 716 Gene3D G3DSA:2.40.10.10 588 606 1.6E-14 T 11-11-2016 ATY42_RS18545 d0509875ec4a5d177a42cb9d1908aa93 716 Pfam PF10459 Peptidase S46 22 714 4.9E-259 T 11-11-2016 IPR019500 Peptidase S46 GO:0008239|GO:0070009 ATY42_RS18545 d0509875ec4a5d177a42cb9d1908aa93 716 SUPERFAMILY SSF50494 641 679 7.44E-25 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS18545 d0509875ec4a5d177a42cb9d1908aa93 716 SUPERFAMILY SSF50494 212 302 7.44E-25 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS18545 d0509875ec4a5d177a42cb9d1908aa93 716 SUPERFAMILY SSF50494 28 87 7.44E-25 T 11-11-2016 IPR009003 Peptidase S1, PA clan ATY42_RS01945 15de2a6781496883f337a6b332ca6b61 394 Pfam PF07394 Protein of unknown function (DUF1501) 31 382 4.0E-45 T 11-11-2016 IPR010869 Protein of unknown function DUF1501 ATY42_RS11080 01c02376865af5ec65fa9ba68ed94bb8 1099 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 494 703 3.5E-132 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11080 01c02376865af5ec65fa9ba68ed94bb8 1099 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 250 332 1.5E-40 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS19285 4ee9b3707d4a93262aad3753cae227da 87 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 15.582 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 ATY42_RS19285 4ee9b3707d4a93262aad3753cae227da 87 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 85 4.2E-21 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 ATY42_RS19285 4ee9b3707d4a93262aad3753cae227da 87 Pfam PF04999 Cell division protein FtsL 5 87 1.2E-24 T 11-11-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 ATY42_RS08560 e39aed05e9704d7e7a498328596f636d 83 Pfam PF11747 Killing trait 11 54 1.5E-11 T 11-11-2016 IPR021070 Killing trait, RebB ATY42_RS13570 9dff400a08cf360e31f7f1542a9a08c3 158 Pfam PF01609 Transposase DDE domain 1 155 1.6E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10430 48d1bb971781770f259a3185d72bb365 99 Pfam PF09498 Protein of unknown function (DUF2388) 29 98 2.6E-23 T 11-11-2016 IPR012661 Conserved hypothetical protein CHP02448 ATY42_RS10430 48d1bb971781770f259a3185d72bb365 99 TIGRFAM TIGR02448 TIGR02448: conserverd hypothetical protein 1 99 1.5E-28 T 11-11-2016 IPR012661 Conserved hypothetical protein CHP02448 ATY42_RS01415 7b4323258ff2a084956c1fa305b30d35 185 SUPERFAMILY SSF55729 29 165 8.1E-22 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS01415 7b4323258ff2a084956c1fa305b30d35 185 Pfam PF00583 Acetyltransferase (GNAT) family 104 163 8.8E-12 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS01415 7b4323258ff2a084956c1fa305b30d35 185 Gene3D G3DSA:3.40.630.30 33 166 7.6E-21 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS10920 80172b87d541d7256416e6c19927d615 44 SUPERFAMILY SSF53681 1 42 1.63E-6 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS10920 80172b87d541d7256416e6c19927d615 44 Gene3D G3DSA:3.40.50.1860 1 42 1.4E-8 T 11-11-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ATY42_RS01375 8a28e1406cae1a86f02ee989fbc82802 213 Pfam PF01609 Transposase DDE domain 36 171 4.3E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00865 937ce81776a16df08a683e219d736de0 271 Pfam PF13276 HTH-like domain 36 88 3.0E-9 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS00865 937ce81776a16df08a683e219d736de0 271 SUPERFAMILY SSF53098 98 258 5.69E-39 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00865 937ce81776a16df08a683e219d736de0 271 Gene3D G3DSA:3.30.420.10 99 255 3.2E-44 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00865 937ce81776a16df08a683e219d736de0 271 Pfam PF13683 Integrase core domain 188 254 4.6E-28 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS14665 b7fb24a1c9cdfd2907dd073376682aab 231 SUPERFAMILY SSF52540 8 129 9.57E-14 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14665 b7fb24a1c9cdfd2907dd073376682aab 231 Gene3D G3DSA:3.40.50.300 6 128 3.8E-25 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS14665 b7fb24a1c9cdfd2907dd073376682aab 231 Pfam PF03796 DnaB-like helicase C terminal domain 12 133 6.8E-28 T 11-11-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ATY42_RS06885 1ae5e4faf4893ddb1192fa8b9cc76f54 485 SUPERFAMILY SSF101960 41 482 4.18E-137 T 11-11-2016 ATY42_RS06885 1ae5e4faf4893ddb1192fa8b9cc76f54 485 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 476 8.9E-193 T 11-11-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 ATY42_RS06885 1ae5e4faf4893ddb1192fa8b9cc76f54 485 Pfam PF01458 Uncharacterized protein family (UPF0051) 223 456 5.3E-66 T 11-11-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ATY42_RS04445 3f8a9ec7f4dd23cfb56d0f171f81ac65 65 Gene3D G3DSA:2.60.260.40 12 63 4.4E-19 T 11-11-2016 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS04445 3f8a9ec7f4dd23cfb56d0f171f81ac65 65 Pfam PF10276 Zinc-finger domain 25 61 1.7E-8 T 11-11-2016 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS11525 9155cd3f785d2194012ddedb99f824b6 240 Pfam PF13358 DDE superfamily endonuclease 96 215 9.9E-28 T 11-11-2016 ATY42_RS11525 9155cd3f785d2194012ddedb99f824b6 240 Pfam PF13592 Winged helix-turn helix 30 78 5.7E-13 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS15845 417021d8379cff17fe7f734b6126bc98 69 Gene3D G3DSA:1.10.10.10 11 41 8.7E-4 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS05930 171ed74227cce2380f61e8d08225f36d 134 Pfam PF12889 Protein of unknown function (DUF3829) 2 128 1.9E-28 T 11-11-2016 IPR024291 Protein of unknown function DUF3829 ATY42_RS20660 87e65e9e130e300bf6fc1816c3eb1d7e 320 Pfam PF12762 ISXO2-like transposase domain 137 285 2.1E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20660 87e65e9e130e300bf6fc1816c3eb1d7e 320 SMART SM01126 137 285 3.7E-50 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS20660 87e65e9e130e300bf6fc1816c3eb1d7e 320 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.0E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS11060 415e7d252048fa67911dd44ebb3fc861 135 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 68 126 6.1E-11 T 11-11-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal ATY42_RS10910 b01b8d1bcb28d89408f114f218757dc5 409 Pfam PF07690 Major Facilitator Superfamily 45 266 1.1E-20 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS10910 b01b8d1bcb28d89408f114f218757dc5 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 110 135 - T 11-11-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ATY42_RS10910 b01b8d1bcb28d89408f114f218757dc5 409 Gene3D G3DSA:1.20.1250.20 45 200 7.1E-19 T 11-11-2016 ATY42_RS10910 b01b8d1bcb28d89408f114f218757dc5 409 Gene3D G3DSA:1.20.1250.20 225 402 2.0E-16 T 11-11-2016 ATY42_RS10910 b01b8d1bcb28d89408f114f218757dc5 409 SUPERFAMILY SSF103473 41 408 4.19E-52 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS22235 bcbab06631d6550f6a7b785ba05289e4 102 SUPERFAMILY SSF54593 29 97 4.7E-10 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS22235 bcbab06631d6550f6a7b785ba05289e4 102 Gene3D G3DSA:3.10.180.10 32 97 1.5E-14 T 11-11-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ATY42_RS02175 89515121e0fdee64cec9b06540f60f37 111 PIRSF PIRSF029416 1 108 2.8E-52 T 11-11-2016 IPR016919 Uncharacterised conserved protein UCP029416, tyrosine-protein phosphatase, Mlr4629 ATY42_RS02175 89515121e0fdee64cec9b06540f60f37 111 SUPERFAMILY SSF52788 2 106 1.26E-19 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ATY42_RS02175 89515121e0fdee64cec9b06540f60f37 111 Gene3D G3DSA:3.40.50.270 2 36 1.3E-7 T 11-11-2016 ATY42_RS02175 89515121e0fdee64cec9b06540f60f37 111 SMART SM00226 1 107 0.0015 T 11-11-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily ATY42_RS11565 0bd36438b4e52a6d70113455b215ab0b 293 SUPERFAMILY SSF75399 167 255 4.19E-6 T 11-11-2016 IPR001101 Plectin repeat GO:0005856 ATY42_RS11565 0bd36438b4e52a6d70113455b215ab0b 293 Gene3D G3DSA:3.90.1290.10 169 273 2.0E-4 T 11-11-2016 IPR001101 Plectin repeat GO:0005856 ATY42_RS02365 aad4e9edf1d050700f39219dbd684e27 240 Pfam PF00535 Glycosyl transferase family 2 7 168 7.5E-24 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS02365 aad4e9edf1d050700f39219dbd684e27 240 SUPERFAMILY SSF53448 1 228 6.12E-40 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS02365 aad4e9edf1d050700f39219dbd684e27 240 Gene3D G3DSA:3.90.550.10 4 208 1.1E-23 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS08270 21432d5db2e705739fa91d249e486d6c 137 Gene3D G3DSA:3.40.630.30 59 133 1.3E-12 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS08270 21432d5db2e705739fa91d249e486d6c 137 SUPERFAMILY SSF55729 73 133 4.43E-8 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS20505 c77f10edc7eaa72d60176ef71acc9b97 239 SUPERFAMILY SSF52518 14 231 1.23E-58 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS20505 c77f10edc7eaa72d60176ef71acc9b97 239 Gene3D G3DSA:3.40.50.970 14 232 4.3E-74 T 11-11-2016 IPR029061 Thiamin diphosphate-binding fold ATY42_RS20505 c77f10edc7eaa72d60176ef71acc9b97 239 Pfam PF00676 Dehydrogenase E1 component 19 214 7.3E-49 T 11-11-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 Gene3D G3DSA:2.130.10.120 96 438 4.6E-99 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 SUPERFAMILY SSF50993 21 440 4.71E-83 T 11-11-2016 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 SUPERFAMILY SSF53474 446 706 4.56E-42 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 Pfam PF00326 Prolyl oligopeptidase family 496 709 5.4E-67 T 11-11-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 Gene3D G3DSA:3.40.50.1820 448 693 8.6E-35 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 638 660 3.5E-47 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 478 496 3.5E-47 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 504 528 3.5E-47 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 532 551 3.5E-47 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 562 582 3.5E-47 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 620 635 3.5E-47 T 11-11-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 ATY42_RS20080 c8c903f928b90a8a79339e257515fc5b 711 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 436 2.3E-112 T 11-11-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 ATY42_RS17775 5b7214dd89704868d669803e8167cf09 198 Gene3D G3DSA:3.40.630.30 1 147 1.7E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS17775 5b7214dd89704868d669803e8167cf09 198 PIRSF PIRSF028520 1 164 8.3E-82 T 11-11-2016 IPR016890 Uncharacterised conserved protein UCP028520 ATY42_RS17775 5b7214dd89704868d669803e8167cf09 198 SUPERFAMILY SSF55729 2 152 1.05E-15 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS17775 5b7214dd89704868d669803e8167cf09 198 Pfam PF00583 Acetyltransferase (GNAT) family 49 141 3.6E-7 T 11-11-2016 IPR000182 GNAT domain GO:0008080 ATY42_RS10300 f9cd6f9f6d4c97a0e72754273a2f3d46 394 Pfam PF13546 DDE superfamily endonuclease 1 246 1.0E-80 T 11-11-2016 ATY42_RS10300 f9cd6f9f6d4c97a0e72754273a2f3d46 394 SUPERFAMILY SSF53098 15 358 2.2E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS22675 97b6425b848f23aa4b5d421b0329321f 401 Pfam PF00487 Fatty acid desaturase 20 241 4.0E-11 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 ATY42_RS14915 9d7b760ac1c678292a9e8ea4dc86d4f3 404 Pfam PF14907 Uncharacterised nucleotidyltransferase 36 262 2.1E-29 T 11-11-2016 ATY42_RS17770 79e109595ce883c068335911e75998d2 398 Pfam PF07730 Histidine kinase 199 261 4.1E-15 T 11-11-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ATY42_RS17770 79e109595ce883c068335911e75998d2 398 Gene3D G3DSA:3.30.565.10 271 383 1.7E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS17770 79e109595ce883c068335911e75998d2 398 SUPERFAMILY SSF55874 276 383 4.19E-13 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS05655 dcfbe38d0d27b4182521ba2448237662 221 Pfam PF04350 Pilus assembly protein, PilO 51 201 1.5E-49 T 11-11-2016 IPR007445 Pilus assembly protein, PilO ATY42_RS05655 dcfbe38d0d27b4182521ba2448237662 221 Gene3D G3DSA:3.30.70.60 96 210 2.3E-34 T 11-11-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ATY42_RS05655 dcfbe38d0d27b4182521ba2448237662 221 Gene3D G3DSA:1.10.287.540 60 95 1.8E-9 T 11-11-2016 IPR023218 UPF0291 structural domain ATY42_RS05655 dcfbe38d0d27b4182521ba2448237662 221 PIRSF PIRSF016482 1 218 3.9E-87 T 11-11-2016 IPR007445 Pilus assembly protein, PilO ATY42_RS20300 c9ee28a125c2a153fda96af2cb2e6c09 133 Gene3D G3DSA:3.30.420.10 4 106 1.3E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20300 c9ee28a125c2a153fda96af2cb2e6c09 133 Pfam PF13358 DDE superfamily endonuclease 6 91 5.7E-18 T 11-11-2016 ATY42_RS20300 c9ee28a125c2a153fda96af2cb2e6c09 133 SUPERFAMILY SSF53098 6 107 8.16E-8 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS11650 3349b0b31206a5ac1eaff3e9997fbe1a 277 Gene3D G3DSA:3.30.565.40 82 158 1.3E-6 T 11-11-2016 IPR025303 Domain of unknown function DUF4163 ATY42_RS15255 3b6d685429d0b5761988f62f8a054d56 445 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 19 443 1.2E-148 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 ATY42_RS15255 3b6d685429d0b5761988f62f8a054d56 445 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 445 9.7E-150 T 11-11-2016 IPR010263 Type VI secretion protein, VC_A0114 ATY42_RS06675 3c9c623902b3fc0ab81d4d6f12898593 408 SUPERFAMILY SSF56059 97 318 3.91E-30 T 11-11-2016 ATY42_RS06675 3c9c623902b3fc0ab81d4d6f12898593 408 Gene3D G3DSA:3.30.470.20 114 355 3.5E-13 T 11-11-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 ATY42_RS10410 9946599837e6e6b764afc671a8f13c0c 490 PIRSF PIRSF006060 18 489 8.6E-88 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS10410 9946599837e6e6b764afc671a8f13c0c 490 Pfam PF13520 Amino acid permease 38 456 1.8E-56 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS12510 c87d09bf092bae69d758f1cab9a124d0 146 Pfam PF13592 Winged helix-turn helix 16 75 4.0E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS02720 5fec2186caafc2dce63bcf34ca6b27e3 200 Pfam PF11304 Protein of unknown function (DUF3106) 53 116 3.5E-9 T 11-11-2016 IPR021455 Protein of unknown function DUF3106 ATY42_RS17230 87608093a43ed8ed8e4d7912db63de94 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 45 281 3.5E-25 T 11-11-2016 IPR025737 MetA-pathway of phenol degradation, putative ATY42_RS22270 83c185a8ee4ac094ef90cdcc25452d6e 433 Gene3D G3DSA:1.20.1250.20 221 417 1.0E-21 T 11-11-2016 ATY42_RS22270 83c185a8ee4ac094ef90cdcc25452d6e 433 Pfam PF07690 Major Facilitator Superfamily 23 380 9.7E-53 T 11-11-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ATY42_RS22270 83c185a8ee4ac094ef90cdcc25452d6e 433 SUPERFAMILY SSF103473 8 421 4.58E-81 T 11-11-2016 IPR020846 Major facilitator superfamily domain ATY42_RS22270 83c185a8ee4ac094ef90cdcc25452d6e 433 Gene3D G3DSA:1.20.1250.20 15 205 4.4E-45 T 11-11-2016 ATY42_RS04280 e0042999d97b7802f5305d4e3c9abfe4 117 Pfam PF07238 PilZ domain 15 104 8.0E-10 T 11-11-2016 IPR009875 PilZ domain GO:0035438 ATY42_RS21485 9eeb454b3d85d1e40b33af78cee7cb97 316 Pfam PF12760 Transposase zinc-ribbon domain 18 64 6.6E-11 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS21485 9eeb454b3d85d1e40b33af78cee7cb97 316 Pfam PF12762 ISXO2-like transposase domain 132 277 6.5E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21485 9eeb454b3d85d1e40b33af78cee7cb97 316 SMART SM01126 132 277 4.1E-49 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 359 2.2E-71 T 11-11-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 13 439 6.4E-171 T 11-11-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 350 359 - T 11-11-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 93 2.7E-8 T 11-11-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 TIGRFAM TIGR02546 III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase 23 439 1.4E-192 T 11-11-2016 IPR013380 ATPase, type III secretion system, H+-transporting GO:0005524|GO:0005737|GO:0006754|GO:0030254|GO:0030257|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 Gene3D G3DSA:3.40.50.300 97 361 7.1E-93 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 SUPERFAMILY SSF52540 97 365 1.54E-95 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS00435 0cf24cbc58c86cb445f77a402cc3b7fb 442 SMART SM00382 162 344 4.0E-7 T 11-11-2016 IPR003593 AAA+ ATPase domain ATY42_RS01045 c8a82711480c607755ae9ec94cdba04e 325 Pfam PF14315 Domain of unknown function (DUF4380) 1 290 6.4E-128 T 11-11-2016 IPR025488 Protein of unknown function DUF4380 ATY42_RS07335 0272234939c0b7b321776692fce3293d 270 SUPERFAMILY SSF54001 39 257 6.32E-35 T 11-11-2016 ATY42_RS07335 0272234939c0b7b321776692fce3293d 270 SMART SM00645 53 267 3.9E-5 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ATY42_RS07335 0272234939c0b7b321776692fce3293d 270 Gene3D G3DSA:3.90.70.10 47 263 1.6E-28 T 11-11-2016 ATY42_RS07335 0272234939c0b7b321776692fce3293d 270 Pfam PF00112 Papain family cysteine protease 68 255 1.0E-9 T 11-11-2016 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 ATY42_RS07335 0272234939c0b7b321776692fce3293d 270 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 222 232 - T 11-11-2016 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 ATY42_RS16135 9c6e22c98d4224b8b72de27982ef618e 89 Gene3D G3DSA:2.20.25.10 10 78 6.5E-6 T 11-11-2016 ATY42_RS16135 9c6e22c98d4224b8b72de27982ef618e 89 Pfam PF03966 Trm112p-like protein 2 68 4.0E-8 T 11-11-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 ATY42_RS16135 9c6e22c98d4224b8b72de27982ef618e 89 SUPERFAMILY SSF158997 52 81 3.01E-7 T 11-11-2016 ATY42_RS16135 9c6e22c98d4224b8b72de27982ef618e 89 SUPERFAMILY SSF158997 1 24 3.01E-7 T 11-11-2016 ATY42_RS17135 3926a0908ec8a251328fe2a4a2f919b4 141 Pfam PF11876 Protein of unknown function (DUF3396) 2 111 2.7E-22 T 11-11-2016 IPR021815 Protein of unknown function DUF3396 ATY42_RS18335 581cf52cfe128ff060788330423ea405 183 SUPERFAMILY SSF55811 8 172 5.63E-28 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS18335 581cf52cfe128ff060788330423ea405 183 Pfam PF00293 NUDIX domain 37 103 1.4E-7 T 11-11-2016 IPR000086 NUDIX hydrolase domain GO:0016787 ATY42_RS18335 581cf52cfe128ff060788330423ea405 183 Gene3D G3DSA:3.90.79.10 10 175 9.1E-38 T 11-11-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 ATY42_RS21370 2f330b00f40c263b94fa546b52366db5 259 Pfam PF05598 Transposase domain (DUF772) 87 160 8.5E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17125 0c1573cb9f474d0292f1cbe04869a177 951 Pfam PF10101 Predicted membrane protein (DUF2339) 190 582 1.5E-105 T 11-11-2016 IPR019286 Protein of unknown function DUF2339, transmembrane ATY42_RS17125 0c1573cb9f474d0292f1cbe04869a177 951 Pfam PF10101 Predicted membrane protein (DUF2339) 604 930 2.7E-37 T 11-11-2016 IPR019286 Protein of unknown function DUF2339, transmembrane ATY42_RS08795 19bb7511f184e3cdc898610173bfa728 348 Gene3D G3DSA:3.90.550.10 16 147 1.5E-15 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS08795 19bb7511f184e3cdc898610173bfa728 348 Pfam PF00535 Glycosyl transferase family 2 17 174 2.3E-24 T 11-11-2016 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ATY42_RS08795 19bb7511f184e3cdc898610173bfa728 348 SUPERFAMILY SSF53448 16 278 2.57E-33 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS12110 c6887be7aeda7ccc61f6a3c655940c4f 92 Gene3D G3DSA:3.40.50.300 49 87 4.5E-9 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12110 c6887be7aeda7ccc61f6a3c655940c4f 92 SUPERFAMILY SSF52540 42 83 5.75E-10 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS12110 c6887be7aeda7ccc61f6a3c655940c4f 92 Pfam PF00005 ABC transporter 47 87 1.7E-8 T 11-11-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ATY42_RS03855 19aada4e9b588fc511eaf075d43138db 243 SUPERFAMILY SSF100950 15 236 5.37E-87 T 11-11-2016 ATY42_RS03855 19aada4e9b588fc511eaf075d43138db 243 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 27 42 - T 11-11-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 ATY42_RS03855 19aada4e9b588fc511eaf075d43138db 243 Gene3D G3DSA:3.40.1080.10 12 224 2.8E-100 T 11-11-2016 ATY42_RS03855 19aada4e9b588fc511eaf075d43138db 243 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 12 225 1.5E-81 T 11-11-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 ATY42_RS03855 19aada4e9b588fc511eaf075d43138db 243 SMART SM00882 14 226 2.6E-94 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ATY42_RS03855 19aada4e9b588fc511eaf075d43138db 243 Pfam PF01144 Coenzyme A transferase 16 225 1.2E-79 T 11-11-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 ATY42_RS10055 a43e7c34122891e935e6a785aae2d6a6 281 Pfam PF13557 Putative MetA-pathway of phenol degradation 63 280 1.1E-10 T 11-11-2016 IPR025737 MetA-pathway of phenol degradation, putative ATY42_RS10925 ba6fa60862c0345e5c06d72a9d4fa171 303 SUPERFAMILY SSF103481 185 282 3.79E-16 T 11-11-2016 ATY42_RS10925 ba6fa60862c0345e5c06d72a9d4fa171 303 SUPERFAMILY SSF103481 44 145 1.44E-17 T 11-11-2016 ATY42_RS10925 ba6fa60862c0345e5c06d72a9d4fa171 303 Pfam PF00892 EamA-like transporter family 11 141 2.4E-18 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS10925 ba6fa60862c0345e5c06d72a9d4fa171 303 Pfam PF00892 EamA-like transporter family 150 278 6.9E-18 T 11-11-2016 IPR000620 EamA domain GO:0016020|GO:0016021 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 PIRSF PIRSF006648 8 252 6.1E-26 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 Pfam PF01061 ABC-2 type transporter 6 216 2.7E-32 T 11-11-2016 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.5E-14 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 55 77 1.5E-14 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.5E-14 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 99 124 1.5E-14 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS03240 de7152f707961e191ad720cab941282b 253 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.5E-14 T 11-11-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 ATY42_RS10210 31cf58e881c1fafd99b02ff3e082cce0 60 Pfam PF13546 DDE superfamily endonuclease 5 54 1.2E-11 T 11-11-2016 ATY42_RS11120 cee6e764a3aed990b1c975279054f2b2 106 Pfam PF10734 Protein of unknown function (DUF2523) 22 90 2.0E-11 T 11-11-2016 IPR019670 Protein of unkown function DUF2523 ATY42_RS13705 39a1763e6ad6da25a8e66f1a0a28c1e3 75 SUPERFAMILY SSF47616 2 61 4.69E-9 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS13705 39a1763e6ad6da25a8e66f1a0a28c1e3 75 Gene3D G3DSA:1.20.1050.10 2 53 7.7E-7 T 11-11-2016 IPR010987 Glutathione S-transferase, C-terminal-like ATY42_RS03575 268605e62b35f433a3af593936d5016c 128 Pfam PF13586 Transposase DDE domain 42 124 2.8E-11 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS12455 ff172b0d473ac8d0a3864fd1537113f7 63 Pfam PF13586 Transposase DDE domain 3 60 2.2E-8 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS04635 c75109240c7f8e0ecb56f1636c663a0f 294 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 12 267 6.6E-38 T 11-11-2016 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 ATY42_RS03840 987b52f7bba2ef508442d95d3ad1a16c 302 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 296 1.1E-105 T 11-11-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581 ATY42_RS03840 987b52f7bba2ef508442d95d3ad1a16c 302 Pfam PF04321 RmlD substrate binding domain 3 297 3.3E-109 T 11-11-2016 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581 ATY42_RS03840 987b52f7bba2ef508442d95d3ad1a16c 302 Gene3D G3DSA:3.40.50.720 3 178 1.7E-28 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03840 987b52f7bba2ef508442d95d3ad1a16c 302 SUPERFAMILY SSF51735 3 297 1.98E-95 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03840 987b52f7bba2ef508442d95d3ad1a16c 302 Gene3D G3DSA:3.90.25.10 225 287 2.6E-31 T 11-11-2016 ATY42_RS03840 987b52f7bba2ef508442d95d3ad1a16c 302 Gene3D G3DSA:3.90.25.10 179 190 2.6E-31 T 11-11-2016 ATY42_RS02885 adf0647c546ce87c2e8b9dd09413a025 364 Pfam PF00589 Phage integrase family 180 347 5.7E-32 T 11-11-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS02885 adf0647c546ce87c2e8b9dd09413a025 364 SUPERFAMILY SSF56349 59 350 5.59E-61 T 11-11-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ATY42_RS02885 adf0647c546ce87c2e8b9dd09413a025 364 Gene3D G3DSA:1.10.443.10 177 357 8.9E-39 T 11-11-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 ATY42_RS02885 adf0647c546ce87c2e8b9dd09413a025 364 Gene3D G3DSA:1.10.150.130 59 173 1.6E-6 T 11-11-2016 IPR023109 Integrase/recombinase, N-terminal ATY42_RS06130 45de7d2fadf013ad99664cf09d3502f1 225 Pfam PF10679 Protein of unknown function (DUF2491) 5 222 3.6E-64 T 11-11-2016 IPR019621 Protein of unknown function DUF2491 ATY42_RS19620 0b9243c347f62ec8b3f9a32ee828f8e3 88 Pfam PF01527 Transposase 2 71 6.5E-16 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS19620 0b9243c347f62ec8b3f9a32ee828f8e3 88 Gene3D G3DSA:1.10.10.60 7 85 1.5E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS19620 0b9243c347f62ec8b3f9a32ee828f8e3 88 SUPERFAMILY SSF46689 1 73 8.24E-13 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS16685 a57c1b0f815f12f026a8a6b1839d976a 203 Pfam PF06197 Protein of unknown function (DUF998) 14 195 1.0E-13 T 11-11-2016 IPR009339 Protein of unknown function DUF998 ATY42_RS08140 65da4c4559a795756c50337fc8214e2c 518 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 80 242 2.5E-8 T 11-11-2016 ATY42_RS13650 595734e65fab8d3e51e84586be4cef32 114 Pfam PF11743 Protein of unknown function (DUF3301) 5 97 1.3E-28 T 11-11-2016 IPR021732 Protein of unknown function DUF3301 ATY42_RS20795 684d5085f4fdc0d30189f92841dcd384 438 Pfam PF13546 DDE superfamily endonuclease 18 291 4.9E-90 T 11-11-2016 ATY42_RS20795 684d5085f4fdc0d30189f92841dcd384 438 SUPERFAMILY SSF53098 18 339 3.57E-15 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS00580 167c82be79ebd57d569c5da78b7fa2d4 105 SUPERFAMILY SSF55874 4 48 5.39E-6 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS00580 167c82be79ebd57d569c5da78b7fa2d4 105 Gene3D G3DSA:3.30.565.10 5 47 2.2E-5 T 11-11-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain ATY42_RS03405 06595689d29cd6df0bbf5eada863867e 186 Pfam PF07209 Protein of unknown function (DUF1415) 11 178 5.2E-71 T 11-11-2016 IPR009858 Protein of unknown function DUF1415 ATY42_RS00710 fc5856f7d2d05f8686efcda1863b5058 76 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 56 5.2E-16 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATY42_RS00710 fc5856f7d2d05f8686efcda1863b5058 76 SUPERFAMILY SSF143120 1 74 6.15E-14 T 11-11-2016 ATY42_RS00710 fc5856f7d2d05f8686efcda1863b5058 76 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 71 5.3E-13 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATY42_RS00710 fc5856f7d2d05f8686efcda1863b5058 76 Gene3D G3DSA:3.40.1620.10 1 50 4.7E-8 T 11-11-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM ATY42_RS11125 1ae899ad1ac2a6b06570ef42f414c130 394 Pfam PF05707 Zonular occludens toxin (Zot) 1 175 4.6E-15 T 11-11-2016 IPR008900 Zona occludens toxin ATY42_RS11125 1ae899ad1ac2a6b06570ef42f414c130 394 Gene3D G3DSA:3.40.50.300 1 177 9.9E-37 T 11-11-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase ATY42_RS19530 e4201d2f9a4d8a7eabd17283ec4a2bac 460 Pfam PF13546 DDE superfamily endonuclease 39 312 1.9E-91 T 11-11-2016 ATY42_RS19530 e4201d2f9a4d8a7eabd17283ec4a2bac 460 SUPERFAMILY SSF53098 39 424 3.34E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06215 9e6048f9a19c9d25e9dcd8eeba4ace13 460 PIRSF PIRSF006060 3 457 1.6E-61 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS06215 9e6048f9a19c9d25e9dcd8eeba4ace13 460 Pfam PF13520 Amino acid permease 40 401 5.7E-30 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS00915 875789c217263d51fb2bba2a503e6f26 92 Pfam PF04380 Membrane fusogenic activity 2 78 7.1E-27 T 11-11-2016 IPR007475 Membrane fusogenic activity ATY42_RS05980 8f7c8a865d098bf80897ced61883d1e7 123 Gene3D G3DSA:3.40.640.10 6 85 4.8E-25 T 11-11-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 ATY42_RS05980 8f7c8a865d098bf80897ced61883d1e7 123 Pfam PF00155 Aminotransferase class I and II 5 86 2.6E-17 T 11-11-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ATY42_RS05980 8f7c8a865d098bf80897ced61883d1e7 123 SUPERFAMILY SSF53383 6 86 4.52E-22 T 11-11-2016 IPR015424 Pyridoxal phosphate-dependent transferase ATY42_RS03250 3954e57a0ae647942ec4187a434c33fe 88 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 8.7E-37 T 11-11-2016 IPR021724 Protein of unknown function DUF3297 ATY42_RS16245 5efb79305f91041e1dc0d87492b90907 250 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 8 207 33.418 T 11-11-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16245 5efb79305f91041e1dc0d87492b90907 250 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 160 181 - T 11-11-2016 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16245 5efb79305f91041e1dc0d87492b90907 250 SUPERFAMILY SSF143243 111 219 4.45E-54 T 11-11-2016 ATY42_RS16245 5efb79305f91041e1dc0d87492b90907 250 SUPERFAMILY SSF143243 8 67 4.45E-54 T 11-11-2016 ATY42_RS16245 5efb79305f91041e1dc0d87492b90907 250 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 33 199 9.7E-42 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS16245 5efb79305f91041e1dc0d87492b90907 250 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 132 187 6.0E-27 T 11-11-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS18960 9b35381195380ca548cd774e6dd8a714 827 Pfam PF02687 FtsX-like permease family 706 820 1.7E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ATY42_RS18960 9b35381195380ca548cd774e6dd8a714 827 Pfam PF02687 FtsX-like permease family 259 375 2.6E-14 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ATY42_RS00680 d9c374c1bb3fa4c33c010f5bf04c2e8a 385 Pfam PF02687 FtsX-like permease family 265 376 4.2E-13 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ATY42_RS00680 d9c374c1bb3fa4c33c010f5bf04c2e8a 385 Pfam PF12704 MacB-like periplasmic core domain 23 229 1.2E-8 T 11-11-2016 IPR025857 MacB-like periplasmic core domain ATY42_RS15720 0a63fd5940979051c09f4a3e276cf0c9 621 Pfam PF05960 Bacterial protein of unknown function (DUF885) 75 591 3.8E-150 T 11-11-2016 IPR010281 Protein of unknown function DUF885 ATY42_RS06585 89ba4de7ba2e9b33a52cd85f096b63c3 266 Pfam PF13751 Transposase DDE domain 165 218 7.4E-6 T 11-11-2016 IPR025668 Transposase DDE domain ATY42_RS12245 80287b3f72f82f6f5c85eb44642a9428 135 Pfam PF11776 Nickel/cobalt transporter regulator 82 127 1.8E-13 T 11-11-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB ATY42_RS12245 80287b3f72f82f6f5c85eb44642a9428 135 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 81 132 3.0E-24 T 11-11-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB ATY42_RS02475 ad34828f0cc7e2a2975802911328363f 208 Pfam PF13548 Domain of unknown function (DUF4126) 9 176 3.6E-42 T 11-11-2016 IPR025196 Domain of unknown function DUF4126 ATY42_RS21660 e1ec74db1d57908a8039521c90428298 324 PIRSF PIRSF028561 1 320 8.4E-169 T 11-11-2016 IPR014548 Predicted acyltransferase ATY42_RS21660 e1ec74db1d57908a8039521c90428298 324 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 92 250 3.1E-7 T 11-11-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 ATY42_RS18285 83bb96de713f738f9f53ae060741357e 156 Pfam PF01609 Transposase DDE domain 1 153 1.1E-23 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21285 869788ecd2a37d8137f791eceafaca3d 177 Pfam PF01609 Transposase DDE domain 6 135 6.5E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS10245 844d6f590365e33a1817948dd5292dba 162 Pfam PF01609 Transposase DDE domain 1 155 1.9E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS12590 594a0ed8d322588f18ae5e9771c28815 116 SUPERFAMILY SSF54913 27 109 1.27E-6 T 11-11-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta ATY42_RS12590 594a0ed8d322588f18ae5e9771c28815 116 Gene3D G3DSA:3.30.70.120 9 105 5.6E-4 T 11-11-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ATY42_RS05500 6cf3604b6bf5f3825ff2b3c3ec87cbd2 99 SUPERFAMILY SSF102829 7 94 9.68E-24 T 11-11-2016 IPR007838 Cell division protein ZapA-like ATY42_RS05500 6cf3604b6bf5f3825ff2b3c3ec87cbd2 99 Pfam PF05164 Cell division protein ZapA 7 91 1.6E-20 T 11-11-2016 IPR007838 Cell division protein ZapA-like ATY42_RS22690 4b30d4d940c6997b61442c41f69455c1 345 Pfam PF01734 Patatin-like phospholipase 51 207 5.6E-27 T 11-11-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 ATY42_RS22690 4b30d4d940c6997b61442c41f69455c1 345 Gene3D G3DSA:3.40.1090.10 50 207 1.0E-14 T 11-11-2016 ATY42_RS22690 4b30d4d940c6997b61442c41f69455c1 345 SUPERFAMILY SSF52151 38 296 6.02E-57 T 11-11-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 ATY42_RS17810 5d73e810cd04c64e54c701f77be6c674 577 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 71 203 1.0E-16 T 11-11-2016 ATY42_RS04770 08102867433e708eb6a864a4156e255c 269 Pfam PF05598 Transposase domain (DUF772) 59 132 1.1E-15 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS22015 40c25a5f4358e4e85c8399c13f7a5324 111 Pfam PF11804 Protein of unknown function (DUF3325) 4 104 4.8E-28 T 11-11-2016 IPR021762 Protein of unknown function DUF3325 ATY42_RS22075 ae010f63cfe19a3c6a351e9a0fe07cdb 220 Gene3D G3DSA:3.40.50.1820 13 216 2.7E-46 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22075 ae010f63cfe19a3c6a351e9a0fe07cdb 220 SUPERFAMILY SSF53474 12 216 5.36E-47 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS22075 ae010f63cfe19a3c6a351e9a0fe07cdb 220 Pfam PF12697 Alpha/beta hydrolase family 58 181 3.8E-6 T 11-11-2016 IPR000073 Alpha/beta hydrolase fold-1 ATY42_RS06115 a859107415d0ef2acf4890186606c920 138 Pfam PF09938 Uncharacterized protein conserved in bacteria (DUF2170) 4 136 9.6E-41 T 11-11-2016 IPR019231 Protein of unknown function DUF2170 ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 SUPERFAMILY SSF46785 12 149 6.17E-33 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 Pfam PF01047 MarR family 44 102 4.4E-14 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 Gene3D G3DSA:1.10.10.10 9 149 5.5E-42 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 SMART SM00347 37 137 1.7E-18 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 5.0E-7 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 5.0E-7 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS22375 c019af429dbb9dd6a3583abc64ed3a91 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 5.0E-7 T 11-11-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ATY42_RS04440 c709cf8b7c5cd678b1125f046b8167cc 322 Pfam PF01609 Transposase DDE domain 135 310 7.6E-33 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04440 c709cf8b7c5cd678b1125f046b8167cc 322 Pfam PF05598 Transposase domain (DUF772) 50 122 1.1E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10050 b2fe30a29d9b608d7d541b1ffef4bf3d 250 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 108 250 1.4E-26 T 11-11-2016 IPR018636 Protein of unknown function DUF2058 ATY42_RS00695 c22a07d5cc176a24f2b40157cb526f9c 271 SMART SM01126 148 270 1.8E-29 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS00695 c22a07d5cc176a24f2b40157cb526f9c 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS00695 c22a07d5cc176a24f2b40157cb526f9c 271 Pfam PF12762 ISXO2-like transposase domain 148 270 1.2E-20 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS21735 54be356357d1ccdc5bdc5e7e5eb59d5e 143 Pfam PF01638 HxlR-like helix-turn-helix 31 116 7.6E-27 T 11-11-2016 IPR002577 Helix-turn-helix, HxlR type ATY42_RS21735 54be356357d1ccdc5bdc5e7e5eb59d5e 143 Gene3D G3DSA:1.10.10.10 17 128 6.9E-43 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS21735 54be356357d1ccdc5bdc5e7e5eb59d5e 143 SUPERFAMILY SSF46785 18 129 5.85E-34 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS14560 1359a8afdabd565ccaf2a3ce058949a2 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 5 284 6.0E-94 T 11-11-2016 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 ATY42_RS17120 c8b1333b7a90b16c4cb6be8867deb500 452 Pfam PF13163 Protein of unknown function (DUF3999) 23 442 3.3E-110 T 11-11-2016 IPR025060 Protein of unknown function DUF3999 ATY42_RS13700 5ddca1afed23f1b9c692b6319d77b40c 116 Gene3D G3DSA:3.40.30.10 2 63 9.5E-14 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS13700 5ddca1afed23f1b9c692b6319d77b40c 116 SUPERFAMILY SSF52833 2 56 1.0E-10 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS13700 5ddca1afed23f1b9c692b6319d77b40c 116 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 46 3.8E-5 T 11-11-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 ATY42_RS16355 122c1795d264c7fa96959f58e3eaacff 222 SUPERFAMILY SSF51366 8 214 2.2E-52 T 11-11-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 ATY42_RS16355 122c1795d264c7fa96959f58e3eaacff 222 Gene3D G3DSA:3.20.20.70 8 215 4.8E-61 T 11-11-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 ATY42_RS16355 122c1795d264c7fa96959f58e3eaacff 222 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 8 216 38.576 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ATY42_RS16355 122c1795d264c7fa96959f58e3eaacff 222 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 11 211 9.5E-40 T 11-11-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ATY42_RS05710 8608c84128903e2082a1f362b445a122 585 Pfam PF13584 Oxygen tolerance 22 491 8.3E-75 T 11-11-2016 IPR025738 Aerotolerance-related protein BatD ATY42_RS17400 b50fede04d8825e3c03b4369c95d04f0 332 Pfam PF07751 Abi-like protein 34 244 1.0E-51 T 11-11-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like ATY42_RS12730 6766682053e74b6bcbb23f23aa71d070 214 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 77 212 2.9E-41 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ATY42_RS12730 6766682053e74b6bcbb23f23aa71d070 214 Pfam PF13144 Chaperone for flagella basal body P-ring formation 58 212 7.1E-42 T 11-11-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal ATY42_RS12730 6766682053e74b6bcbb23f23aa71d070 214 SMART SM00858 89 151 3.6E-8 T 11-11-2016 IPR013974 SAF domain Reactome: R-HSA-4085001 ATY42_RS10130 c4eb412cc1f3717974e27a7d25dd9f89 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 10 75 1.1E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS02625 8ab0b30320609d0c8360898f0f2d040e 125 SUPERFAMILY SSF47413 3 66 7.17E-12 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS02625 8ab0b30320609d0c8360898f0f2d040e 125 Pfam PF01381 Helix-turn-helix 9 55 6.9E-9 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS02625 8ab0b30320609d0c8360898f0f2d040e 125 Gene3D G3DSA:1.10.260.40 4 66 4.4E-16 T 11-11-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 ATY42_RS02625 8ab0b30320609d0c8360898f0f2d040e 125 SMART SM00530 7 63 2.2E-8 T 11-11-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ATY42_RS11785 6b4f3e31d19514834a4e2681b2ebe7a0 87 SUPERFAMILY SSF46689 3 66 8.69E-10 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11785 6b4f3e31d19514834a4e2681b2ebe7a0 87 Gene3D G3DSA:1.10.10.60 13 83 3.5E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS11785 6b4f3e31d19514834a4e2681b2ebe7a0 87 Pfam PF01527 Transposase 3 70 1.4E-18 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS01250 7d2ab94c172109e32b64563f5da66491 104 Pfam PF13936 Helix-turn-helix domain 3 45 1.2E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS15205 2f4630a0a4c393d423e82ce41a7c3f77 342 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 6 333 2.0E-64 T 11-11-2016 IPR017740 Type VI secretion system-associated, ImpA ATY42_RS15205 2f4630a0a4c393d423e82ce41a7c3f77 342 Pfam PF06812 ImpA, N-terminal, type VI secretion system 9 132 3.6E-29 T 11-11-2016 IPR010657 ImpA, N-terminal ATY42_RS15060 d51555064b2a129d6f1ab8d5a85bc7e4 234 SUPERFAMILY SSF48452 96 206 5.51E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS15060 d51555064b2a129d6f1ab8d5a85bc7e4 234 Gene3D G3DSA:1.25.40.10 136 223 6.5E-10 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS03920 c4ba940133459669e994f343865be9ca 257 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 57 79 - T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS03920 c4ba940133459669e994f343865be9ca 257 Pfam PF01066 CDP-alcohol phosphatidyltransferase 16 79 7.6E-15 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS03920 c4ba940133459669e994f343865be9ca 257 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 192 1.7E-33 T 11-11-2016 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 ATY42_RS16490 1606b36fdb8a553f13cdee8e8e293b58 135 Gene3D G3DSA:1.10.10.10 28 115 2.1E-17 T 11-11-2016 IPR011991 Winged helix-turn-helix DNA-binding domain ATY42_RS16490 1606b36fdb8a553f13cdee8e8e293b58 135 SUPERFAMILY SSF46767 30 112 3.27E-19 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS16490 1606b36fdb8a553f13cdee8e8e293b58 135 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 111 1.2E-17 T 11-11-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ATY42_RS13515 70956264af5982975507252ed5153fac 323 Pfam PF01963 TraB family 50 312 1.3E-79 T 11-11-2016 IPR002816 Pheromone shutdown, TraB ATY42_RS17370 e374bdb5ac99523b6f9e238760a26130 144 Gene3D G3DSA:1.20.120.330 5 143 3.6E-41 T 11-11-2016 ATY42_RS17370 e374bdb5ac99523b6f9e238760a26130 144 SUPERFAMILY SSF81593 13 139 1.22E-36 T 11-11-2016 ATY42_RS17370 e374bdb5ac99523b6f9e238760a26130 144 Pfam PF08780 Nucleotidyltransferase substrate binding protein like 7 140 2.5E-38 T 11-11-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 ATY42_RS17370 e374bdb5ac99523b6f9e238760a26130 144 TIGRFAM TIGR01987 HI0074: nucleotidyltransferase substrate binding protein, HI0074 family 17 140 4.3E-31 T 11-11-2016 IPR010235 Nucleotidyltransferase substrate binding protein, HI0074 ATY42_RS19330 b92f7b6b574d0fea18d5d23d22cf9b3b 179 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 166 9.8E-25 T 11-11-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ATY42_RS10705 ddba0328da1277447d31e87715757797 812 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 22 773 1.4E-248 T 11-11-2016 IPR018752 Uncharacterised protein family UPF0753 ATY42_RS10705 ddba0328da1277447d31e87715757797 812 Hamap MF_01871 UPF0753 protein . 16 788 22.004 T 11-11-2016 IPR018752 Uncharacterised protein family UPF0753 ATY42_RS07190 c612af5e30559d656be15a4822d8817c 188 Pfam PF11745 Protein of unknown function (DUF3304) 30 140 9.2E-30 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS08490 934a16009279a733aa489fe393b35ae9 158 SMART SM00260 6 146 0.01 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08490 934a16009279a733aa489fe393b35ae9 158 SUPERFAMILY SSF50341 5 87 6.54E-13 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS08490 934a16009279a733aa489fe393b35ae9 158 Pfam PF01584 CheW-like domain 11 145 1.3E-14 T 11-11-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 ATY42_RS19675 a62a6b86324c38aa6662a280f0278ca3 106 SUPERFAMILY SSF56935 2 105 1.07E-18 T 11-11-2016 ATY42_RS19675 a62a6b86324c38aa6662a280f0278ca3 106 Gene3D G3DSA:2.40.170.20 2 105 1.2E-21 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS19675 a62a6b86324c38aa6662a280f0278ca3 106 Pfam PF00593 TonB dependent receptor 3 105 5.1E-11 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS17560 8e19584b6ecc388fd7c65dfb2f081b62 274 Pfam PF13503 Domain of unknown function (DUF4123) 53 157 4.8E-12 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS10675 6269283c67c07a10ed3903356ae5977a 205 Pfam PF01609 Transposase DDE domain 29 163 7.7E-10 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS03545 03feb275d8cd3cb1fa2bd66bdff2a5d7 127 Pfam PF04138 GtrA-like protein 9 126 1.0E-14 T 11-11-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 ATY42_RS06660 584a522338257aaa34d93ae0edffe5a0 589 Pfam PF04183 IucA / IucC family 150 379 7.9E-42 T 11-11-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 ATY42_RS06660 584a522338257aaa34d93ae0edffe5a0 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 409 568 1.8E-34 T 11-11-2016 IPR022770 Ferric iron reductase FhuF domain ATY42_RS06835 27647cf4d40463f84523fefd29e7b4ca 58 Gene3D G3DSA:3.30.420.10 5 42 2.8E-5 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS06835 27647cf4d40463f84523fefd29e7b4ca 58 Pfam PF13683 Integrase core domain 6 41 3.9E-10 T 11-11-2016 IPR001584 Integrase, catalytic core GO:0015074 ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 Gene3D G3DSA:1.10.287.1080 141 228 7.7E-13 T 11-11-2016 ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 Gene3D G3DSA:1.10.287.1080 23 78 2.0E-8 T 11-11-2016 ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 SUPERFAMILY SSF101386 144 246 4.8E-24 T 11-11-2016 ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 174 236 1.1E-6 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 106 4.8E-27 T 11-11-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 SUPERFAMILY SSF101386 9 108 2.18E-23 T 11-11-2016 ATY42_RS08705 72149a507d3cbdc657f8fad87e484c2f 339 TIGRFAM TIGR00444 mazG: MazG family protein 16 267 1.3E-90 T 11-11-2016 IPR011551 NTP pyrophosphohydrolase MazG ATY42_RS12915 06ba706a86a60490843ac3885ba1b6ec 151 Pfam PF02050 Flagellar FliJ protein 19 137 3.0E-23 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ATY42_RS12915 06ba706a86a60490843ac3885ba1b6ec 151 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 138 7.5E-28 T 11-11-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ATY42_RS06375 ba9d827fcffb20278a93b8e711c4ba95 370 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 38 273 4.5E-60 T 11-11-2016 IPR018642 Protein of unknown function DUF2066 ATY42_RS15390 9c8d81922360485a4a175b7196d5b942 199 SUPERFAMILY SSF117916 103 186 8.28E-23 T 11-11-2016 ATY42_RS15390 9c8d81922360485a4a175b7196d5b942 199 Pfam PF01106 NifU-like domain 115 179 1.0E-19 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ATY42_RS15390 9c8d81922360485a4a175b7196d5b942 199 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 193 39.454 T 11-11-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 ATY42_RS15390 9c8d81922360485a4a175b7196d5b942 199 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 120 179 4.0E-28 T 11-11-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ATY42_RS15390 9c8d81922360485a4a175b7196d5b942 199 Gene3D G3DSA:2.60.300.12 1 99 5.6E-10 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS15390 9c8d81922360485a4a175b7196d5b942 199 SUPERFAMILY SSF89360 1 99 6.08E-15 T 11-11-2016 IPR000361 FeS cluster biogenesis ATY42_RS12905 2edf486e3857a7e6fde020f11bd0ba5f 206 Pfam PF02108 Flagellar assembly protein FliH 73 193 1.7E-19 T 11-11-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ATY42_RS22850 5667b8e98a9d798371e25f11ff0d89cb 105 Pfam PF04341 Protein of unknown function, DUF485 14 101 5.9E-33 T 11-11-2016 IPR007436 Protein of unknown function DUF485 ATY42_RS04345 7de1264b5051804400b16eae1b049396 315 Gene3D G3DSA:3.20.20.190 30 311 3.7E-47 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS04345 7de1264b5051804400b16eae1b049396 315 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 166 3.1E-22 T 11-11-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ATY42_RS04345 7de1264b5051804400b16eae1b049396 315 SUPERFAMILY SSF51695 43 309 1.47E-45 T 11-11-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 ATY42_RS04345 7de1264b5051804400b16eae1b049396 315 Pfam PF16387 Domain of unknown function 217 308 1.3E-14 T 11-11-2016 IPR032160 Domain of unknown function DUF4996 ATY42_RS18765 5291d7c84bab3e455e6bb1d68aa1b625 135 Pfam PF13202 EF hand 86 102 1.6E-6 T 11-11-2016 IPR002048 EF-hand domain GO:0005509 ATY42_RS18765 5291d7c84bab3e455e6bb1d68aa1b625 135 SUPERFAMILY SSF47473 83 133 4.64E-7 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS18765 5291d7c84bab3e455e6bb1d68aa1b625 135 Gene3D G3DSA:1.10.238.10 79 130 1.2E-6 T 11-11-2016 IPR011992 EF-hand domain pair ATY42_RS20500 4cf69ccd5556dc9fe20fef9f52eec78d 297 SUPERFAMILY SSF140959 23 282 1.16E-96 T 11-11-2016 ATY42_RS20500 4cf69ccd5556dc9fe20fef9f52eec78d 297 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 17 282 38.8 T 11-11-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATY42_RS20500 4cf69ccd5556dc9fe20fef9f52eec78d 297 Pfam PF03301 Tryptophan 2,3-dioxygenase 18 144 4.2E-41 T 11-11-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATY42_RS20500 4cf69ccd5556dc9fe20fef9f52eec78d 297 Pfam PF03301 Tryptophan 2,3-dioxygenase 208 281 5.4E-21 T 11-11-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ATY42_RS01595 11b9f0e01e7759ff6abab65695fac2f1 192 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 116 173 8.3E-17 T 11-11-2016 IPR018637 Domain of unknown function DUF2059 ATY42_RS09400 577dadd3eaa99cabc785fbd7c200de6e 325 SUPERFAMILY SSF82282 17 317 1.11E-83 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS09400 577dadd3eaa99cabc785fbd7c200de6e 325 Gene3D G3DSA:3.20.20.330 12 317 5.3E-94 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS09400 577dadd3eaa99cabc785fbd7c200de6e 325 Pfam PF02574 Homocysteine S-methyltransferase 25 317 2.2E-74 T 11-11-2016 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ATY42_RS17720 a6212f95d3bf5022d381983746379eef 137 Pfam PF01145 SPFH domain / Band 7 family 3 79 3.8E-9 T 11-11-2016 IPR001107 Band 7 domain ATY42_RS01785 4ae4a1ccfbe6fc99cb5140e86d43890b 233 Pfam PF07277 SapC 7 223 1.3E-65 T 11-11-2016 IPR010836 SapC ATY42_RS19490 01520d763baa8c252d71589ed07f0aec 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 83 2.5E-19 T 11-11-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ATY42_RS02375 f71fd3cebd100b7d45943c4d06d553f7 102 Gene3D G3DSA:1.10.150.20 13 96 8.2E-21 T 11-11-2016 ATY42_RS02375 f71fd3cebd100b7d45943c4d06d553f7 102 Pfam PF11731 Pathogenicity locus 8 91 4.5E-29 T 11-11-2016 IPR021725 Pathogenicity locus ATY42_RS15020 2904126667e57d6a3e4ac7f08625222d 218 Pfam PF13490 Putative zinc-finger 12 45 3.1E-5 T 11-11-2016 IPR027383 Putative zinc-finger ATY42_RS07950 1989c786076cbde92f9fcf9b9e99be57 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 224 4.2E-41 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS07950 1989c786076cbde92f9fcf9b9e99be57 256 SUPERFAMILY SSF52096 8 246 1.02E-47 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS07950 1989c786076cbde92f9fcf9b9e99be57 256 Gene3D G3DSA:3.90.226.10 3 230 1.3E-45 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS00615 7f0cf1a15a1bd41acadfb554bc95151b 352 Pfam PF13358 DDE superfamily endonuclease 180 317 7.1E-30 T 11-11-2016 ATY42_RS00615 7f0cf1a15a1bd41acadfb554bc95151b 352 SUPERFAMILY SSF46689 20 138 6.09E-16 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS00615 7f0cf1a15a1bd41acadfb554bc95151b 352 Pfam PF13551 Winged helix-turn helix 27 86 3.4E-14 T 11-11-2016 ATY42_RS00615 7f0cf1a15a1bd41acadfb554bc95151b 352 Pfam PF13592 Winged helix-turn helix 104 162 6.0E-19 T 11-11-2016 IPR025959 Winged helix-turn helix domain ATY42_RS16510 315f5411605e78854112a35b25bff422 414 Pfam PF04235 Protein of unknown function (DUF418) 245 401 5.8E-40 T 11-11-2016 IPR007349 Domain of unknown function DUF418 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 Gene3D G3DSA:3.40.390.10 461 670 9.3E-70 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 Gene3D G3DSA:3.40.390.10 300 421 9.3E-70 T 11-11-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 Pfam PF05649 Peptidase family M13 44 418 7.5E-64 T 11-11-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 Pfam PF01431 Peptidase family M13 473 663 8.3E-42 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 480 492 1.7E-5 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 501 517 1.7E-5 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 574 585 1.7E-5 T 11-11-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 ATY42_RS16480 61ca9621a20137fa8ca4d396319953cc 671 SUPERFAMILY SSF55486 43 670 3.52E-139 T 11-11-2016 ATY42_RS02010 759a14208de0a98932befc2575348f02 44 Pfam PF08085 Entericidin EcnA/B family 22 42 1.5E-8 T 11-11-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 ATY42_RS05210 a5b51def11f14b26c0308a5168f5cca5 248 SUPERFAMILY SSF49899 19 241 5.88E-48 T 11-11-2016 IPR013320 Concanavalin A-like lectin/glucanase domain ATY42_RS05210 a5b51def11f14b26c0308a5168f5cca5 248 Pfam PF01670 Glycosyl hydrolase family 12 59 240 6.0E-18 T 11-11-2016 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 ATY42_RS05210 a5b51def11f14b26c0308a5168f5cca5 248 Gene3D G3DSA:2.60.120.180 20 242 8.3E-46 T 11-11-2016 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6784 ATY42_RS05690 3128264ff15d99af26bd0f0abb81254e 320 Pfam PF01882 Protein of unknown function DUF58 68 151 6.3E-19 T 11-11-2016 IPR002881 Domain of unknown function DUF58 ATY42_RS00105 ef0a2282ca00a5629e1f427d858082b5 326 Pfam PF01609 Transposase DDE domain 135 307 1.1E-26 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00105 ef0a2282ca00a5629e1f427d858082b5 326 Pfam PF05598 Transposase domain (DUF772) 50 122 7.8E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS04025 5a65b502e33c0e8ca5437ec7637f493c 368 Pfam PF03739 Predicted permease YjgP/YjgQ family 10 365 2.1E-71 T 11-11-2016 IPR005495 Permease LptG/LptF-related GO:0016021 ATY42_RS04025 5a65b502e33c0e8ca5437ec7637f493c 368 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 8 365 9.0E-116 T 11-11-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 ATY42_RS17590 1914753e9abbfb10923b775b023e5ea7 411 Pfam PF01610 Transposase 155 390 9.1E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS17590 1914753e9abbfb10923b775b023e5ea7 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS14325 50d5cbb3c7765609351e464590cc7cee 289 SUPERFAMILY SSF52096 25 265 5.15E-35 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS14325 50d5cbb3c7765609351e464590cc7cee 289 Gene3D G3DSA:3.90.226.10 73 261 5.3E-33 T 11-11-2016 IPR029045 ClpP/crotonase-like domain ATY42_RS14325 50d5cbb3c7765609351e464590cc7cee 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 126 234 5.5E-19 T 11-11-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 ATY42_RS09625 1b1eba1281f560948471442589bca492 783 Pfam PF13953 PapC C-terminal domain 702 762 2.3E-11 T 11-11-2016 IPR025949 PapC-like, C-terminal domain ATY42_RS09625 1b1eba1281f560948471442589bca492 783 Pfam PF00577 Outer membrane usher protein 197 692 1.4E-27 T 11-11-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 ATY42_RS12940 32f4008ee6b7089658f55ea8482f33b0 138 Pfam PF04347 Flagellar biosynthesis protein, FliO 50 134 1.9E-24 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ATY42_RS12940 32f4008ee6b7089658f55ea8482f33b0 138 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 38 105 2.4E-23 T 11-11-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ATY42_RS14095 8607e464213dca2a8e68f4fd18992da2 62 SUPERFAMILY SSF110087 2 35 1.7E-7 T 11-11-2016 IPR007410 DR1885-like metal-binding protein ATY42_RS14095 8607e464213dca2a8e68f4fd18992da2 62 Pfam PF04314 Protein of unknown function (DUF461) 3 35 2.3E-5 T 11-11-2016 IPR007410 DR1885-like metal-binding protein ATY42_RS23190 cb69d5822180ab41e7407f846973a262 235 Pfam PF15648 Restriction endonuclease fold toxin 5 135 212 1.1E-14 T 11-11-2016 IPR028904 Tox-REase-5 domain ATY42_RS06855 84cb21b3194847b96366db41ffcdc786 71 Pfam PF01609 Transposase DDE domain 9 55 7.6E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07155 1b6c96b3474ed8c817253b78018fbe0d 182 Pfam PF11745 Protein of unknown function (DUF3304) 22 135 8.3E-26 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS17040 51efaf101725f82a1372c817c62e500c 145 Pfam PF11162 Protein of unknown function (DUF2946) 14 142 6.4E-8 T 11-11-2016 IPR021333 Protein of unknown function DUF2946 ATY42_RS04700 d07f0d880f46ccd962a62ffd56516b0f 157 Pfam PF05598 Transposase domain (DUF772) 87 155 1.2E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21620 2aded07a88dfbe993ecdb5056836a193 45 Gene3D G3DSA:3.40.30.10 15 42 2.8E-4 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS06670 98be4300861b7bbe652fa3015ce6eb29 600 Pfam PF06276 Ferric iron reductase FhuF-like transporter 398 553 9.1E-19 T 11-11-2016 IPR022770 Ferric iron reductase FhuF domain ATY42_RS06670 98be4300861b7bbe652fa3015ce6eb29 600 Pfam PF04183 IucA / IucC family 160 375 8.2E-35 T 11-11-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 ATY42_RS11380 c1698818838c1fb4cb95d9207a5ff3d5 154 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 135 1.3E-30 T 11-11-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 ATY42_RS05295 aa04aa2c2cfc23cdb299d494ab6aeba5 420 Pfam PF08014 Domain of unknown function (DUF1704) 48 406 6.2E-119 T 11-11-2016 IPR012548 Protein of unknown function DUF1704 ATY42_RS05295 aa04aa2c2cfc23cdb299d494ab6aeba5 420 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 20 402 8.7E-125 T 11-11-2016 IPR012656 Conserved hypothetical protein CHP02421, QEGLA ATY42_RS05295 aa04aa2c2cfc23cdb299d494ab6aeba5 420 SMART SM01154 40 409 5.5E-150 T 11-11-2016 IPR012548 Protein of unknown function DUF1704 ATY42_RS06560 5f590e30b80d4ad6e63ae812dc46ace5 101 SUPERFAMILY SSF82771 6 77 7.98E-12 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily ATY42_RS06560 5f590e30b80d4ad6e63ae812dc46ace5 101 Pfam PF01541 GIY-YIG catalytic domain 7 76 7.2E-12 T 11-11-2016 IPR000305 GIY-YIG nuclease superfamily ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 162 4.2E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 SUPERFAMILY SSF56935 20 228 6.54E-89 T 11-11-2016 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 SUPERFAMILY SSF56935 505 692 6.54E-89 T 11-11-2016 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 SUPERFAMILY SSF56935 264 477 6.54E-89 T 11-11-2016 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 SUPERFAMILY SSF56935 726 880 6.54E-89 T 11-11-2016 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 Gene3D G3DSA:2.170.130.10 53 164 1.7E-15 T 11-11-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 33 880 4.7E-169 T 11-11-2016 IPR010104 Bacterial TonB-dependent receptor ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 Pfam PF00593 TonB dependent receptor 603 878 5.2E-34 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 Gene3D G3DSA:2.40.170.20 518 880 7.4E-64 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 Gene3D G3DSA:2.40.170.20 165 227 7.4E-64 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08350 d5019246ee165666cb3298a546631ac7 880 Gene3D G3DSA:2.40.170.20 263 476 7.4E-64 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS14875 af393f8ae356b10d6bd3cf55e2e7a890 166 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 154 2.3E-51 T 11-11-2016 ATY42_RS14875 af393f8ae356b10d6bd3cf55e2e7a890 166 SUPERFAMILY SSF50475 9 139 8.61E-38 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS14875 af393f8ae356b10d6bd3cf55e2e7a890 166 Gene3D G3DSA:2.30.110.10 7 164 4.1E-55 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS13195 26d382bce9e4cabb1fcaef6a2d4f1f9f 86 SUPERFAMILY SSF54909 3 84 8.85E-14 T 11-11-2016 IPR011008 Dimeric alpha-beta barrel ATY42_RS13195 26d382bce9e4cabb1fcaef6a2d4f1f9f 86 Pfam PF03795 YCII-related domain 10 84 1.6E-8 T 11-11-2016 IPR005545 YCII-related ATY42_RS13195 26d382bce9e4cabb1fcaef6a2d4f1f9f 86 Gene3D G3DSA:3.30.70.1060 5 84 7.6E-9 T 11-11-2016 ATY42_RS09405 dfb52a931bce0819c0695978934b43c9 645 Pfam PF05960 Bacterial protein of unknown function (DUF885) 101 636 2.3E-169 T 11-11-2016 IPR010281 Protein of unknown function DUF885 ATY42_RS06645 48e4f0bcc36afe4bed776b8d8787c05f 244 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 239 2.2E-35 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06645 48e4f0bcc36afe4bed776b8d8787c05f 244 Pfam PF02654 Cobalamin-5-phosphate synthase 8 237 1.3E-49 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS06645 48e4f0bcc36afe4bed776b8d8787c05f 244 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 244 48.254 T 11-11-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 ATY42_RS17205 82e7e707ed4e4cb4ee64cb48905a17b4 163 Pfam PF05598 Transposase domain (DUF772) 59 133 7.6E-18 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21005 61c1760766b75301194ed74b51c07049 570 Gene3D G3DSA:1.25.40.10 180 193 7.7E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS21005 61c1760766b75301194ed74b51c07049 570 Gene3D G3DSA:1.25.40.10 24 35 7.7E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS21005 61c1760766b75301194ed74b51c07049 570 Gene3D G3DSA:1.25.40.10 336 405 7.7E-8 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS21005 61c1760766b75301194ed74b51c07049 570 SUPERFAMILY SSF48452 336 407 8.35E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS18440 b5962b545e1ebfbb9af759ad7e9ac010 105 Pfam PF01609 Transposase DDE domain 1 53 2.6E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22330 c380dddb5b0c1c69ee1bd0c54205d2cd 373 Pfam PF00487 Fatty acid desaturase 71 337 1.2E-32 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 ATY42_RS09110 8cbf1b3cee41feef959c2df1f4fbd563 196 Pfam PF04519 Polymer-forming cytoskeletal 66 161 1.5E-22 T 11-11-2016 IPR007607 Protein of unknown function DUF583 ATY42_RS09575 e6286de3d882935decdb3c2868785296 275 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 231 257 - T 11-11-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981 ATY42_RS09575 e6286de3d882935decdb3c2868785296 275 Pfam PF01148 Cytidylyltransferase family 3 269 1.9E-68 T 11-11-2016 ATY42_RS20120 033f72d873e959d4522b7378211e0508 266 Pfam PF04338 Protein of unknown function, DUF481 47 265 3.5E-62 T 11-11-2016 IPR007433 Protein of unknown function DUF481 ATY42_RS16370 922b5a4fafbdf6fe8faee591a7525940 641 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 598 640 1.7E-14 T 11-11-2016 IPR020011 Motility protein FimV, C-terminal ATY42_RS16370 922b5a4fafbdf6fe8faee591a7525940 641 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 192 265 6.6E-22 T 11-11-2016 IPR020012 Motility protein FimV, N-terminal ATY42_RS07535 d811d2ea576ef4ae997d3b0ea4b6f487 136 Pfam PF03203 MerC mercury resistance protein 11 123 1.3E-25 T 11-11-2016 IPR004891 MerC mercury resistance protein ATY42_RS16615 7f96a737062b05b7c169b8e300d0631d 244 Pfam PF04402 Protein of unknown function (DUF541) 40 240 4.5E-52 T 11-11-2016 IPR007497 Protein of unknown function DUF541 ATY42_RS00205 3c625918fa29e4afbaca7c584096a1f1 326 Pfam PF01609 Transposase DDE domain 135 307 1.1E-26 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS00205 3c625918fa29e4afbaca7c584096a1f1 326 Pfam PF05598 Transposase domain (DUF772) 50 122 5.4E-18 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS20445 3b9658348ffff482e7e35dc95826f2d3 124 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 109 1.1E-22 T 11-11-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ATY42_RS01455 3e793607e4de6a4d202d64481483d7bc 169 Pfam PF01609 Transposase DDE domain 1 155 1.6E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS14965 8093f57242bda3d90c194943c7ef066d 417 Pfam PF01943 Polysaccharide biosynthesis protein 4 275 4.0E-10 T 11-11-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ATY42_RS18295 d2c55a8b78dcec72e5c5be3df8371635 101 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 8 90 9.2E-29 T 11-11-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 ATY42_RS22070 9a17d3489b4edc0fd70c065234bda6fb 241 SUPERFAMILY SSF103481 8 87 2.22E-7 T 11-11-2016 ATY42_RS19810 2c45b65b9d840d17d604dc5bde554471 123 SMART SM00749 56 119 4.5E-9 T 11-11-2016 IPR014004 Transport-associated and nodulation domain, bacteria ATY42_RS19810 2c45b65b9d840d17d604dc5bde554471 123 Pfam PF04972 BON domain 51 118 1.1E-18 T 11-11-2016 IPR007055 BON domain ATY42_RS03365 e99a1127f70b54480da539eb40ca4c2d 445 Gene3D G3DSA:2.120.10.30 134 444 7.0E-61 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS03365 e99a1127f70b54480da539eb40ca4c2d 445 Gene3D G3DSA:2.120.10.30 67 100 7.0E-61 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS03365 e99a1127f70b54480da539eb40ca4c2d 445 Gene3D G3DSA:2.120.10.30 19 25 7.0E-61 T 11-11-2016 IPR011042 Six-bladed beta-propeller, TolB-like ATY42_RS03365 e99a1127f70b54480da539eb40ca4c2d 445 SUPERFAMILY SSF50952 133 443 4.05E-33 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ATY42_RS03365 e99a1127f70b54480da539eb40ca4c2d 445 SUPERFAMILY SSF50952 69 100 4.05E-33 T 11-11-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ATY42_RS03365 e99a1127f70b54480da539eb40ca4c2d 445 Pfam PF07995 Glucose / Sorbosone dehydrogenase 199 369 9.6E-13 T 11-11-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 ATY42_RS14855 12d57db9339fd7a7a00e28ea272110a2 375 Pfam PF01384 Phosphate transporter family 19 172 1.2E-34 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ATY42_RS14855 12d57db9339fd7a7a00e28ea272110a2 375 Pfam PF01384 Phosphate transporter family 191 361 8.2E-46 T 11-11-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ATY42_RS08380 8d1ff28fcf038664ca6805621d889924 128 Pfam PF01609 Transposase DDE domain 3 109 2.5E-11 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS06390 465893865ffc71b038dcafad6c5c19bf 236 Gene3D G3DSA:3.90.550.10 1 232 2.9E-46 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS06390 465893865ffc71b038dcafad6c5c19bf 236 SUPERFAMILY SSF53448 1 231 1.35E-50 T 11-11-2016 IPR029044 Nucleotide-diphospho-sugar transferases ATY42_RS06390 465893865ffc71b038dcafad6c5c19bf 236 Pfam PF00483 Nucleotidyl transferase 2 118 5.7E-14 T 11-11-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ATY42_RS00935 52ffe4c9aa246d8ba5fe7becfb0378b7 270 Pfam PF13505 Outer membrane protein beta-barrel domain 95 255 2.4E-7 T 11-11-2016 IPR027385 Outer membrane protein beta-barrel ATY42_RS00935 52ffe4c9aa246d8ba5fe7becfb0378b7 270 Gene3D G3DSA:2.40.160.20 117 253 1.9E-4 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS00935 52ffe4c9aa246d8ba5fe7becfb0378b7 270 SUPERFAMILY SSF56925 113 245 1.05E-8 T 11-11-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 ATY42_RS15910 52ceccfb14b3d1e2781b3f9277c9feeb 153 Gene3D G3DSA:2.60.120.10 2 141 5.9E-46 T 11-11-2016 IPR014710 RmlC-like jelly roll fold ATY42_RS15910 52ceccfb14b3d1e2781b3f9277c9feeb 153 Pfam PF06172 Cupin superfamily (DUF985) 7 136 7.1E-42 T 11-11-2016 IPR009327 Cupin domain of unknown function DUF985 ATY42_RS15910 52ceccfb14b3d1e2781b3f9277c9feeb 153 SUPERFAMILY SSF51182 2 142 2.16E-48 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS10630 839ae00fbf2f0ea0400106223eaef49a 101 Pfam PF06305 Protein of unknown function (DUF1049) 23 80 1.5E-8 T 11-11-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 ATY42_RS17555 aecd6c0043ffbdf56fc49b6c60acf04f 198 Pfam PF11745 Protein of unknown function (DUF3304) 40 154 1.1E-21 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS07585 f54e4431ca6495105f4a085bd0cda292 177 Pfam PF13211 Protein of unknown function (DUF4019) 64 170 1.9E-28 T 11-11-2016 IPR025091 Protein of unknown function DUF4019 ATY42_RS19240 869d276370e2e2ff74fb574f40a6e086 273 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 4 227 24.274 T 11-11-2016 IPR026579 Cell division protein FtsQ GO:0090529 ATY42_RS19240 869d276370e2e2ff74fb574f40a6e086 273 Pfam PF08478 POTRA domain, FtsQ-type 35 103 1.6E-18 T 11-11-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type ATY42_RS19240 869d276370e2e2ff74fb574f40a6e086 273 Pfam PF03799 Cell division protein FtsQ 107 219 2.4E-21 T 11-11-2016 IPR005548 Cell division protein FtsQ/DivIB ATY42_RS06985 61bbb1c9267ee41c599a17395effda15 190 Gene3D G3DSA:1.10.340.30 4 165 1.0E-47 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS06985 61bbb1c9267ee41c599a17395effda15 190 SUPERFAMILY SSF48150 4 167 7.26E-53 T 11-11-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ATY42_RS06985 61bbb1c9267ee41c599a17395effda15 190 Pfam PF03352 Methyladenine glycosylase 11 119 2.0E-40 T 11-11-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 ATY42_RS06435 b9baeca563211ddc8fc02502a7976017 57 Gene3D G3DSA:1.10.10.60 11 48 1.5E-4 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS04645 744c77e2858a7331354c01ff4016fad0 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 11 75 1.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS00825 7008d164d6ea85802526923a3723c9af 145 SUPERFAMILY SSF51182 11 144 5.34E-31 T 11-11-2016 IPR011051 RmlC-like cupin domain ATY42_RS00825 7008d164d6ea85802526923a3723c9af 145 Gene3D G3DSA:2.60.120.520 26 144 5.7E-40 T 11-11-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 ATY42_RS23225 c50f7cef2f7692c1cc1d43c51b2cd64e 215 Pfam PF05651 Putative sugar diacid recognition 4 56 1.9E-11 T 11-11-2016 IPR008599 Putative sugar diacid recognition ATY42_RS05280 99a4d8069e76d41c1b2fe4e3cd452548 212 Gene3D G3DSA:3.40.50.1110 7 197 1.3E-25 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS05280 99a4d8069e76d41c1b2fe4e3cd452548 212 SUPERFAMILY SSF52266 7 198 4.58E-28 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS05280 99a4d8069e76d41c1b2fe4e3cd452548 212 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 12 188 8.1E-25 T 11-11-2016 IPR013830 SGNH hydrolase-type esterase domain ATY42_RS03565 ab29e3b540969a3dc9a360ec1c6dec8e 321 Pfam PF12760 Transposase zinc-ribbon domain 23 69 1.1E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS03565 ab29e3b540969a3dc9a360ec1c6dec8e 321 Pfam PF12762 ISXO2-like transposase domain 137 282 1.6E-31 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS03565 ab29e3b540969a3dc9a360ec1c6dec8e 321 SMART SM01126 137 282 1.1E-48 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS02920 ad0af79edcc234d47d8bf16c5434aa8c 361 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 265 9.3E-45 T 11-11-2016 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 ATY42_RS12720 c6918ffcfb2a9fdc971a281e2ccaade2 110 Gene3D G3DSA:1.20.58.300 6 45 1.0E-4 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 ATY42_RS12720 c6918ffcfb2a9fdc971a281e2ccaade2 110 SUPERFAMILY SSF140566 5 81 1.03E-7 T 11-11-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 ATY42_RS13155 e48b0905fa8a6b95e9b3612e8565989c 87 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 2 72 8.4E-18 T 11-11-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 ATY42_RS12620 5d8ccbfda17b296fec1aebc2f64c3e27 642 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 54 222 4.0E-33 T 11-11-2016 IPR024618 Domain of unknown function DUF3857 ATY42_RS12620 5d8ccbfda17b296fec1aebc2f64c3e27 642 Pfam PF01841 Transglutaminase-like superfamily 269 342 1.0E-7 T 11-11-2016 IPR002931 Transglutaminase-like ATY42_RS12620 5d8ccbfda17b296fec1aebc2f64c3e27 642 SUPERFAMILY SSF54001 264 345 1.14E-8 T 11-11-2016 ATY42_RS21420 a92f55dfa72c6f848eee94a4acb29638 315 Pfam PF06258 Mitochondrial fission ELM1 12 313 3.2E-81 T 11-11-2016 IPR009367 Mitochondrial fission protein ELM1-like ATY42_RS21585 3f148bfaaad1ae2200884b9cc8bcb57b 316 PIRSF PIRSF003097 18 310 6.4E-57 T 11-11-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 ATY42_RS21585 3f148bfaaad1ae2200884b9cc8bcb57b 316 Pfam PF02687 FtsX-like permease family 190 310 1.2E-9 T 11-11-2016 IPR003838 ABC transporter permease protein domain GO:0016020 ATY42_RS03360 65a0d75c3d81b21d467737334a5df1e1 102 Pfam PF11607 Protein of unknown function (DUF3247) 1 92 9.7E-40 T 11-11-2016 IPR021649 Protein of unknown function DUF3247 ATY42_RS05985 489668a8d37844234b5198b68b833353 101 Gene3D G3DSA:3.90.1150.10 7 72 1.3E-8 T 11-11-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 ATY42_RS11790 0a93b5cd5db56137a297206c30adeea3 98 Pfam PF13276 HTH-like domain 46 98 1.6E-10 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS01650 c30fddc67be669194e4e4615ae9d829b 158 Pfam PF01609 Transposase DDE domain 1 155 9.9E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS19745 04f4bac180d5d9cb45d4000ba6049d94 388 Pfam PF07786 Protein of unknown function (DUF1624) 21 173 2.4E-10 T 11-11-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78|Reactome: R-HSA-2024096|Reactome: R-HSA-2206291 ATY42_RS20425 35591aae0dcddbdbe87ae2aecd6496ed 74 Gene3D G3DSA:1.10.390.10 28 73 4.2E-19 T 11-11-2016 ATY42_RS20425 35591aae0dcddbdbe87ae2aecd6496ed 74 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 11 73 1.6E-13 T 11-11-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 ATY42_RS20425 35591aae0dcddbdbe87ae2aecd6496ed 74 SUPERFAMILY SSF55486 26 73 1.04E-11 T 11-11-2016 ATY42_RS20740 4b18cc2b01bd1d9f957db7ef20bd9752 183 Pfam PF13358 DDE superfamily endonuclease 11 148 1.7E-33 T 11-11-2016 ATY42_RS01810 559668c642b656966689e665f205ca98 596 Pfam PF05960 Bacterial protein of unknown function (DUF885) 55 584 1.6E-84 T 11-11-2016 IPR010281 Protein of unknown function DUF885 ATY42_RS13300 dc4a1bae9c20638ba3b861768ac088d3 148 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 13 82 2.7E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS01555 905ac9285a4ac9a9d3f4579c783cac35 493 Pfam PF05598 Transposase domain (DUF772) 75 149 3.5E-14 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS00115 a99b1aecd8ec17804ed9ca9099b99bc5 188 Pfam PF04191 Phospholipid methyltransferase 73 170 5.9E-20 T 11-11-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ATY42_RS09480 92eeff84d01fc95612f5daf12e9b992c 200 SUPERFAMILY SSF53335 9 179 1.72E-14 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS09480 92eeff84d01fc95612f5daf12e9b992c 200 Gene3D G3DSA:3.40.50.150 5 177 4.8E-9 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS06915 896be60d858251f80a2263324c7938cd 198 Pfam PF07273 Protein of unknown function (DUF1439) 38 159 9.8E-9 T 11-11-2016 IPR010835 Protein of unknown function DUF1439 ATY42_RS14155 d8d8a16cc7b6b2262fd5909f97a0d3ee 102 SUPERFAMILY SSF52091 3 88 6.28E-11 T 11-11-2016 IPR002645 STAS domain ATY42_RS14155 d8d8a16cc7b6b2262fd5909f97a0d3ee 102 Gene3D G3DSA:3.30.750.24 3 87 2.1E-8 T 11-11-2016 IPR002645 STAS domain ATY42_RS14155 d8d8a16cc7b6b2262fd5909f97a0d3ee 102 Pfam PF13466 STAS domain 4 82 2.3E-14 T 11-11-2016 IPR002645 STAS domain ATY42_RS22640 34e3fbeb5957c3cc2b113fd7274cc938 425 Pfam PF13657 HipA N-terminal domain 6 102 1.4E-21 T 11-11-2016 IPR017508 HipA, N-terminal subdomain 1 ATY42_RS22640 34e3fbeb5957c3cc2b113fd7274cc938 425 Pfam PF07804 HipA-like C-terminal domain 239 386 7.4E-36 T 11-11-2016 IPR012893 HipA-like, C-terminal ATY42_RS22640 34e3fbeb5957c3cc2b113fd7274cc938 425 Pfam PF07805 HipA-like N-terminal domain 151 230 9.7E-18 T 11-11-2016 IPR012894 HipA, N-terminal subdomain 2 ATY42_RS22640 34e3fbeb5957c3cc2b113fd7274cc938 425 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 3 103 1.9E-34 T 11-11-2016 IPR017508 HipA, N-terminal subdomain 1 ATY42_RS06535 dbfcbfcb53e0c909a35f96d6cb8a6a90 496 Pfam PF01554 MatE 254 411 6.5E-22 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS06535 dbfcbfcb53e0c909a35f96d6cb8a6a90 496 Pfam PF01554 MatE 22 183 4.5E-30 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS06535 dbfcbfcb53e0c909a35f96d6cb8a6a90 496 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 424 1.0E-69 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS06535 dbfcbfcb53e0c909a35f96d6cb8a6a90 496 PIRSF PIRSF006603 1 457 5.2E-108 T 11-11-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ATY42_RS12740 de1be050650064fd9dbde3c1fe5e0fac 132 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 11-11-2016 IPR019776 Flagellar basal body rod protein, conserved site ATY42_RS12740 de1be050650064fd9dbde3c1fe5e0fac 132 Pfam PF00460 Flagella basal body rod protein 11 39 6.6E-8 T 11-11-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ATY42_RS12740 de1be050650064fd9dbde3c1fe5e0fac 132 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 6.1E-29 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ATY42_RS12740 de1be050650064fd9dbde3c1fe5e0fac 132 PIRSF PIRSF002889 1 132 2.4E-34 T 11-11-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ATY42_RS21665 08a9ae81fd4fbb61b1204e1f93266cfd 95 SUPERFAMILY SSF54637 4 93 1.49E-15 T 11-11-2016 IPR029069 HotDog domain ATY42_RS21665 08a9ae81fd4fbb61b1204e1f93266cfd 95 Pfam PF07977 FabA-like domain 6 60 5.2E-7 T 11-11-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 ATY42_RS21665 08a9ae81fd4fbb61b1204e1f93266cfd 95 Gene3D G3DSA:3.10.129.10 5 93 2.2E-14 T 11-11-2016 IPR029069 HotDog domain ATY42_RS11865 39bf2ee51b2299ecbce855a649d4f452 218 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 1 205 26.622 T 11-11-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 ATY42_RS11865 39bf2ee51b2299ecbce855a649d4f452 218 Pfam PF01794 Ferric reductase like transmembrane component 53 166 2.5E-18 T 11-11-2016 IPR013130 Ferric reductase transmembrane component-like domain ATY42_RS11955 272eaa562c9cf6a00b4633e3e906cd5f 228 Pfam PF11218 Protein of unknown function (DUF3011) 30 225 1.7E-88 T 11-11-2016 IPR021381 Protein of unknown function DUF3011 ATY42_RS09335 68b2a352a0bbeeb407542585be148d2c 332 Pfam PF00487 Fatty acid desaturase 75 299 1.0E-25 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 ATY42_RS09335 68b2a352a0bbeeb407542585be148d2c 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 231 252 7.2E-18 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 ATY42_RS09335 68b2a352a0bbeeb407542585be148d2c 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 135 164 7.2E-18 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 ATY42_RS09335 68b2a352a0bbeeb407542585be148d2c 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 53 73 7.2E-18 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 ATY42_RS09335 68b2a352a0bbeeb407542585be148d2c 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 98 118 7.2E-18 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 ATY42_RS09335 68b2a352a0bbeeb407542585be148d2c 332 PRINTS PR00075 Fatty acid desaturase family 1 signature 274 288 7.2E-18 T 11-11-2016 IPR015876 Fatty acid desaturase, type 1, core GO:0016717|GO:0055114 Reactome: R-HSA-75105 ATY42_RS04175 b48bc811a62ec0535182bf5e5fe41c6b 83 Pfam PF13358 DDE superfamily endonuclease 9 49 9.6E-8 T 11-11-2016 ATY42_RS09825 891295ab20fce9ac5eee94221d9a3c97 91 Gene3D G3DSA:3.10.20.280 1 80 7.4E-23 T 11-11-2016 IPR005346 RnfH protein ATY42_RS09825 891295ab20fce9ac5eee94221d9a3c97 91 Pfam PF03658 RnfH family Ubiquitin 1 78 2.1E-19 T 11-11-2016 IPR005346 RnfH protein ATY42_RS09825 891295ab20fce9ac5eee94221d9a3c97 91 Hamap MF_00460 Protein RnfH [rnfH]. 1 86 18.769 T 11-11-2016 IPR005346 RnfH protein ATY42_RS09825 891295ab20fce9ac5eee94221d9a3c97 91 SUPERFAMILY SSF54285 1 70 3.36E-15 T 11-11-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ATY42_RS02520 1a7d9ae62a65fed427f5f06f5d1e0798 296 Pfam PF03186 CobD/Cbib protein 9 166 1.3E-9 T 11-11-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 ATY42_RS22555 09592ccc3a106400ff36c3715578cdaf 265 Pfam PF02673 Bacitracin resistance protein BacA 7 254 1.0E-66 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ATY42_RS22555 09592ccc3a106400ff36c3715578cdaf 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 260 15.863 T 11-11-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ATY42_RS07750 d97d9e471c8d46c936419df82b345154 460 SUPERFAMILY SSF53098 40 424 4.93E-29 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS07750 d97d9e471c8d46c936419df82b345154 460 Pfam PF13546 DDE superfamily endonuclease 39 312 9.3E-89 T 11-11-2016 ATY42_RS01815 23438a91047f550c2ce647cab0be02fc 152 Gene3D G3DSA:3.30.110.70 69 101 4.3E-4 T 11-11-2016 IPR002765 Uncharacterised protein family UPF0145 ATY42_RS07170 500f7eff47f2ac4bbc98546b8f0f4ab7 286 Pfam PF13503 Domain of unknown function (DUF4123) 12 133 3.7E-8 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS06040 850a26814581b66e8c215a22ad68bbab 1103 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 500 706 1.6E-129 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS06040 850a26814581b66e8c215a22ad68bbab 1103 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 255 339 8.9E-40 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS08910 9650ef43bc1360455b61424d416abaca 321 Pfam PF00593 TonB dependent receptor 57 320 5.7E-23 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08910 9650ef43bc1360455b61424d416abaca 321 Gene3D G3DSA:2.40.170.20 19 321 1.8E-30 T 11-11-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 ATY42_RS08910 9650ef43bc1360455b61424d416abaca 321 SUPERFAMILY SSF56935 18 321 6.18E-32 T 11-11-2016 ATY42_RS17735 dc87b95616ae4194735c94afd9ede5ca 265 SUPERFAMILY SSF55166 137 262 4.71E-24 T 11-11-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5658034 ATY42_RS17735 dc87b95616ae4194735c94afd9ede5ca 265 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 140 263 4.9E-36 T 11-11-2016 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ATY42_RS08305 037f63c6c5175618ed9e12dc9316f175 458 Pfam PF05598 Transposase domain (DUF772) 59 132 5.5E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS08305 037f63c6c5175618ed9e12dc9316f175 458 Pfam PF01609 Transposase DDE domain 281 416 2.9E-8 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07775 e710c86283bf5f9bf19fd2dc33d921ca 529 Pfam PF00884 Sulfatase 207 496 1.3E-31 T 11-11-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 ATY42_RS07775 e710c86283bf5f9bf19fd2dc33d921ca 529 Gene3D G3DSA:3.40.720.10 208 505 5.9E-14 T 11-11-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 ATY42_RS07775 e710c86283bf5f9bf19fd2dc33d921ca 529 SUPERFAMILY SSF53649 207 357 2.05E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ATY42_RS07775 e710c86283bf5f9bf19fd2dc33d921ca 529 SUPERFAMILY SSF53649 392 509 2.05E-17 T 11-11-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 ATY42_RS15540 2ba918abac7ae1f1680d750049a90cab 63 SUPERFAMILY SSF52172 1 59 1.85E-9 T 11-11-2016 IPR011006 CheY-like superfamily ATY42_RS15540 2ba918abac7ae1f1680d750049a90cab 63 Pfam PF00072 Response regulator receiver domain 1 62 1.4E-6 T 11-11-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ATY42_RS15540 2ba918abac7ae1f1680d750049a90cab 63 Gene3D G3DSA:3.40.50.2300 1 61 3.2E-8 T 11-11-2016 ATY42_RS02215 35d2d5e852041ab46fdfac6efc9394a5 347 Pfam PF04332 Protein of unknown function (DUF475) 49 339 3.1E-128 T 11-11-2016 IPR007427 Protein of unknown function DUF475 ATY42_RS09420 5a855d6a13bded6d706744a4202766bb 224 Pfam PF04367 Protein of unknown function (DUF502) 80 180 4.0E-27 T 11-11-2016 IPR007462 Protein of unknown function DUF502 ATY42_RS08555 1171f88cf227068362ad2e07d8abdae0 411 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS08555 1171f88cf227068362ad2e07d8abdae0 411 Pfam PF01610 Transposase 155 390 4.3E-63 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS02765 3f23f8082845643fd0b267c7575b6e7f 187 Pfam PF01300 Telomere recombination 14 186 1.6E-39 T 11-11-2016 IPR006070 YrdC-like domain GO:0003725 ATY42_RS02765 3f23f8082845643fd0b267c7575b6e7f 187 SUPERFAMILY SSF55821 7 185 7.94E-50 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ATY42_RS02765 3f23f8082845643fd0b267c7575b6e7f 187 Gene3D G3DSA:3.90.870.10 7 186 7.2E-54 T 11-11-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain ATY42_RS02765 3f23f8082845643fd0b267c7575b6e7f 187 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 4 186 38.535 T 11-11-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 ATY42_RS06475 a0763716fc1a227358581db10a1f1556 263 Pfam PF01578 Cytochrome C assembly protein 39 258 6.4E-33 T 11-11-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ATY42_RS02835 2a4af5c8fb13af084339fb88f79c5859 488 PIRSF PIRSF026631 7 487 5.1E-123 T 11-11-2016 IPR014529 Uncharacterised conserved protein UCP026631 ATY42_RS02835 2a4af5c8fb13af084339fb88f79c5859 488 Pfam PF03703 Bacterial PH domain 72 149 1.7E-16 T 11-11-2016 IPR005182 Domain of unknown function DUF304 ATY42_RS02835 2a4af5c8fb13af084339fb88f79c5859 488 Pfam PF03703 Bacterial PH domain 262 335 2.6E-8 T 11-11-2016 IPR005182 Domain of unknown function DUF304 ATY42_RS02835 2a4af5c8fb13af084339fb88f79c5859 488 Pfam PF03703 Bacterial PH domain 410 468 7.3E-11 T 11-11-2016 IPR005182 Domain of unknown function DUF304 ATY42_RS04780 8c914a7b2b97a25d658a6df72c66cc42 115 Pfam PF13276 HTH-like domain 47 99 4.6E-8 T 11-11-2016 IPR025948 HTH-like domain ATY42_RS07120 de8dab4d06abca7cbbc973f17a243bc7 74 Pfam PF04328 Protein of unknown function (DUF466) 15 74 3.3E-26 T 11-11-2016 IPR007423 Protein of unknown function DUF466 ATY42_RS10470 3b07e554e33c1e045fd63cb107ae103c 56 Pfam PF04995 Heme exporter protein D (CcmD) 2 44 1.4E-9 T 11-11-2016 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 ATY42_RS23255 e5f56128f01eb93180918f824980a6f9 318 Pfam PF03741 Integral membrane protein TerC family 80 282 9.2E-55 T 11-11-2016 IPR005496 Integral membrane protein TerC GO:0016021 ATY42_RS23255 e5f56128f01eb93180918f824980a6f9 318 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 6 312 1.5E-120 T 11-11-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 ATY42_RS17465 e36dc780c2715a95b8ec5506d5413f78 281 Pfam PF13503 Domain of unknown function (DUF4123) 72 137 1.3E-5 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS13020 c97d41876a83ce0201a3a9f6dd4f7e4d 149 Pfam PF13936 Helix-turn-helix domain 6 47 1.6E-11 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS08365 6bae83e656272a93a45e062a5ca77c39 139 Gene3D G3DSA:3.30.420.40 19 91 9.2E-11 T 11-11-2016 ATY42_RS08365 6bae83e656272a93a45e062a5ca77c39 139 Pfam PF02685 Glucokinase 23 86 2.1E-8 T 11-11-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ATY42_RS21700 a651348aa8557612971fe137e8b09b17 436 Gene3D G3DSA:3.40.50.980 120 280 3.8E-12 T 11-11-2016 ATY42_RS21700 a651348aa8557612971fe137e8b09b17 436 Gene3D G3DSA:3.30.300.30 336 427 4.7E-7 T 11-11-2016 ATY42_RS21700 a651348aa8557612971fe137e8b09b17 436 Pfam PF00501 AMP-binding enzyme 104 285 4.0E-19 T 11-11-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 ATY42_RS21700 a651348aa8557612971fe137e8b09b17 436 SUPERFAMILY SSF56801 16 435 6.41E-42 T 11-11-2016 ATY42_RS01195 2fbd02b6a0a730eacc81f05ba10dea2d 230 Pfam PF05598 Transposase domain (DUF772) 87 160 7.7E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS10260 b103dded53c94aa8a73bb5f9a210b862 128 Pfam PF05598 Transposase domain (DUF772) 71 111 6.4E-7 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS16740 ecc3f74825bbf1f883beceaa28828301 460 Pfam PF13546 DDE superfamily endonuclease 39 312 1.0E-90 T 11-11-2016 ATY42_RS16740 ecc3f74825bbf1f883beceaa28828301 460 SUPERFAMILY SSF53098 36 424 9.86E-31 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS23210 fefa8beaf3f2ac70736b865cd8341f20 228 Pfam PF01609 Transposase DDE domain 52 186 2.5E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS21220 559d17d6bd7ae0fbc55b869a446f7714 127 Pfam PF03692 Putative zinc- or iron-chelating domain 4 96 2.0E-12 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein ATY42_RS11150 70db40689d13abd115dce44a2ee854da 109 Pfam PF10734 Protein of unknown function (DUF2523) 8 94 9.4E-21 T 11-11-2016 IPR019670 Protein of unkown function DUF2523 ATY42_RS21295 f6f5e4ba125e4ee5a845fb14b8932ea7 326 Pfam PF05598 Transposase domain (DUF772) 50 122 1.4E-19 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS21295 f6f5e4ba125e4ee5a845fb14b8932ea7 326 Pfam PF01609 Transposase DDE domain 135 310 2.1E-31 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS20870 5779900f7176fa87d8682bb628c9d664 158 Pfam PF10003 Integral membrane protein (DUF2244) 18 150 4.5E-31 T 11-11-2016 IPR019253 Protein of unknown function DUF2244, transmembrane ATY42_RS10450 cfb46ded4bacb11964e10556e94aa87e 143 Pfam PF03918 Cytochrome C biogenesis protein 25 141 2.8E-48 T 11-11-2016 IPR005616 CcmH/CycL/Ccl2/NrfF family ATY42_RS07405 ad52301ec735093bff3f52fcbaa9ea73 343 Pfam PF05598 Transposase domain (DUF772) 87 161 1.6E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS15725 92d02b3e26349cf50b1441a05dbd6f3d 610 Pfam PF05960 Bacterial protein of unknown function (DUF885) 67 595 6.5E-159 T 11-11-2016 IPR010281 Protein of unknown function DUF885 ATY42_RS11275 9cff9bcf31e923963882feb16e0936de 1338 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 255 337 5.9E-40 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11275 9cff9bcf31e923963882feb16e0936de 1338 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 810 1011 9.2E-130 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS11275 9cff9bcf31e923963882feb16e0936de 1338 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 504 706 1.5E-132 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS03070 baef0e90bffc7f5fcc9cc4244c2ec2f5 238 SUPERFAMILY SSF51735 15 200 8.51E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03070 baef0e90bffc7f5fcc9cc4244c2ec2f5 238 Gene3D G3DSA:3.40.50.720 23 195 5.4E-60 T 11-11-2016 IPR016040 NAD(P)-binding domain ATY42_RS03070 baef0e90bffc7f5fcc9cc4244c2ec2f5 238 Pfam PF00107 Zinc-binding dehydrogenase 48 125 2.6E-10 T 11-11-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ATY42_RS15180 8a63cb07213fd62df5b8063414a7ef36 187 Pfam PF01526 Tn3 transposase DDE domain 1 151 1.9E-56 T 11-11-2016 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 ATY42_RS17585 3344b43723328d571aaf2c49710ddc67 440 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 78 189 6.9E-18 T 11-11-2016 IPR018712 Domain of unknown function DUF2235 ATY42_RS18800 0ab0e49a3b9b15768240c570df8cd0a5 298 SUPERFAMILY SSF53213 2 287 8.24E-90 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ATY42_RS18800 0ab0e49a3b9b15768240c570df8cd0a5 298 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 271 1.5E-78 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ATY42_RS18800 0ab0e49a3b9b15768240c570df8cd0a5 298 Gene3D G3DSA:3.40.830.10 1 289 2.1E-105 T 11-11-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ATY42_RS09160 ec29d2df34ab81381ec7218af889a619 84 Pfam PF10982 Protein of unknown function (DUF2789) 1 75 1.6E-30 T 11-11-2016 IPR021250 Protein of unknown function DUF2789 ATY42_RS20430 60065ec6c83db1231c65c53fb5e582d9 161 Pfam PF06127 Protein of unknown function (DUF962) 10 156 2.9E-25 T 11-11-2016 IPR009305 Protein of unknown function DUF962 ATY42_RS17385 5918694546913cfe029e06f6ddb631a1 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 98 2.1E-14 T 11-11-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family ATY42_RS04030 287516393571b852c45d2f5477a0e537 155 Pfam PF06271 RDD family 14 144 5.4E-20 T 11-11-2016 IPR010432 RDD ATY42_RS21925 276a89f39053b0d6c2013824a87947ec 296 SUPERFAMILY SSF88713 5 295 1.97E-72 T 11-11-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ATY42_RS21925 276a89f39053b0d6c2013824a87947ec 296 Gene3D G3DSA:3.20.20.370 4 295 3.0E-85 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS21925 276a89f39053b0d6c2013824a87947ec 296 Pfam PF01522 Polysaccharide deacetylase 74 160 4.0E-7 T 11-11-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 ATY42_RS21925 276a89f39053b0d6c2013824a87947ec 296 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 4 296 6.3E-153 T 11-11-2016 IPR017625 Putative urate catabolism protein ATY42_RS03635 17144e6313eda13922d38f8c2f5d6653 368 Pfam PF05275 Copper resistance protein B precursor (CopB) 164 368 2.2E-78 T 11-11-2016 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 ATY42_RS16795 c6ed345495e6c2d257ed9128b0c2d22b 110 Pfam PF13936 Helix-turn-helix domain 2 31 2.9E-9 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS18565 33b23d82986b4ed36da4f8bc95ab448e 237 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 29 217 3.3E-30 T 11-11-2016 IPR010239 Conserved hypothetical protein CHP02001 ATY42_RS18565 33b23d82986b4ed36da4f8bc95ab448e 237 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 1 237 1.4E-69 T 11-11-2016 IPR010239 Conserved hypothetical protein CHP02001 ATY42_RS14170 260561f44085c4603f2d8af9fa4d1d11 84 Gene3D G3DSA:1.10.10.60 6 37 6.5E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS21630 93d9815c2c29f86e6e5ee3073bd7cced 1262 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 932 1260 1.2E-54 T 11-11-2016 IPR007452 Translocation and assembly module TamB ATY42_RS15945 c5d140866ee534d89efc9072be8050e4 346 Pfam PF01757 Acyltransferase family 14 327 3.7E-23 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 ATY42_RS03035 3880926906f8fcd543aba9b607471885 221 Pfam PF11445 Protein of unknown function (DUF2894) 12 193 3.1E-60 T 11-11-2016 IPR021549 Protein of unknown function DUF2894 ATY42_RS03050 fbabebcc0bdaba81d64139806877f3e3 245 Pfam PF11828 Protein of unknown function (DUF3348) 1 243 2.4E-82 T 11-11-2016 IPR021783 Protein of unknown function DUF3348 ATY42_RS12030 d94a66b910745e03b08d908f59c3570d 100 Gene3D G3DSA:2.30.110.10 2 91 6.5E-13 T 11-11-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 ATY42_RS22025 6bf7e3e8507b507b2fc064ef239285cd 274 Pfam PF03929 PepSY-associated TM region 21 229 1.6E-19 T 11-11-2016 IPR005625 PepSY-associated TM protein ATY42_RS09325 5ae57d3286e794fc93ddec0f48ea3362 294 Pfam PF07103 Protein of unknown function (DUF1365) 33 287 8.6E-74 T 11-11-2016 IPR010775 Protein of unknown function DUF1365 ATY42_RS15830 1628cf6f28aa74bdacffa890bba38fba 271 SMART SM01126 148 270 9.3E-32 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS15830 1628cf6f28aa74bdacffa890bba38fba 271 Pfam PF12762 ISXO2-like transposase domain 148 270 1.0E-21 T 11-11-2016 IPR024445 ISXO2-like transposase domain ATY42_RS15830 1628cf6f28aa74bdacffa890bba38fba 271 Pfam PF12760 Transposase zinc-ribbon domain 36 80 1.0E-9 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS02585 f8b61a78d958683ded399b2a53599e5d 205 Pfam PF01066 CDP-alcohol phosphatidyltransferase 29 94 8.4E-8 T 11-11-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ATY42_RS21100 9ccd1e6154cedbf9cd7f7c54a2c94c1c 455 Pfam PF07063 Domain of unknown function (DUF1338) 11 410 1.6E-120 T 11-11-2016 IPR009770 Domain of unknown function DUF1338 ATY42_RS21100 9ccd1e6154cedbf9cd7f7c54a2c94c1c 455 SMART SM01150 13 410 5.3E-227 T 11-11-2016 IPR009770 Domain of unknown function DUF1338 ATY42_RS21190 15dfb1a6c2fb1db7211b330c54fd7f91 106 Pfam PF13698 Domain of unknown function (DUF4156) 22 103 1.5E-9 T 11-11-2016 IPR025294 Protein of unknown function DUF4156 ATY42_RS00320 221b35e4ee70b91f806bc148c54e291e 61 Pfam PF11154 Protein of unknown function (DUF2934) 5 41 7.5E-12 T 11-11-2016 IPR021327 Protein of unknown function DUF2934 ATY42_RS09805 1afadb29c97ad37793df263e8683459b 79 SUPERFAMILY SSF52743 6 70 3.53E-10 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS09805 1afadb29c97ad37793df263e8683459b 79 Gene3D G3DSA:3.40.50.200 5 71 5.5E-10 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS03145 8121387ff085d4097a5b56a7b6e837fc 531 Pfam PF13520 Amino acid permease 13 428 3.9E-39 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS03145 8121387ff085d4097a5b56a7b6e837fc 531 PIRSF PIRSF006060 1 466 1.0E-71 T 11-11-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 ATY42_RS00885 c8121fee8bc2b5f6e86990c0a78f9c34 160 Pfam PF12760 Transposase zinc-ribbon domain 36 80 4.2E-10 T 11-11-2016 IPR024442 Transposase, zinc-ribbon ATY42_RS14610 03bb5f06eca6c3636db370c4bb4b8d5f 65 SUPERFAMILY SSF53474 4 51 9.34E-5 T 11-11-2016 IPR029058 Alpha/Beta hydrolase fold ATY42_RS07890 88b50daa2dc427fbad07feae449b6c0c 157 Pfam PF12098 Protein of unknown function (DUF3574) 48 157 1.4E-33 T 11-11-2016 IPR021957 Protein of unknown function DUF3574 ATY42_RS13685 84a664d20242f67d052d4769290dc09f 328 Pfam PF01464 Transglycosylase SLT domain 202 299 2.7E-27 T 11-11-2016 IPR008258 Transglycosylase SLT domain 1 ATY42_RS13685 84a664d20242f67d052d4769290dc09f 328 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 219 247 - T 11-11-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ATY42_RS13685 84a664d20242f67d052d4769290dc09f 328 Gene3D G3DSA:1.10.530.10 191 321 2.9E-45 T 11-11-2016 ATY42_RS13685 84a664d20242f67d052d4769290dc09f 328 SUPERFAMILY SSF53955 193 322 1.46E-44 T 11-11-2016 IPR023346 Lysozyme-like domain ATY42_RS16830 443fbd5271e975b49dfbfa45f461035e 241 Pfam PF01609 Transposase DDE domain 101 235 2.4E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11920 fcae2e858c11fef137fbfcbc7290fd88 364 Pfam PF01757 Acyltransferase family 8 319 9.2E-23 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 ATY42_RS14860 d56026909d898ca69508812436fe160e 208 Pfam PF01865 Protein of unknown function DUF47 60 203 6.7E-6 T 11-11-2016 IPR018445 Putative phosphate transport regulator ATY42_RS08725 e42ab1dcce3e1631b590371ac87cea29 143 Gene3D G3DSA:2.40.50.140 87 135 4.7E-8 T 11-11-2016 IPR012340 Nucleic acid-binding, OB-fold ATY42_RS08725 e42ab1dcce3e1631b590371ac87cea29 143 Pfam PF01957 NfeD-like C-terminal, partner-binding 7 135 3.9E-29 T 11-11-2016 IPR002810 NfeD-like, C-terminal domain ATY42_RS04190 48ec9f4a252ff0681318c072be6f4277 210 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 7 189 1.6E-39 T 11-11-2016 IPR013343 CRISPR-associated protein Cas4 ATY42_RS04190 48ec9f4a252ff0681318c072be6f4277 210 Pfam PF01930 Domain of unknown function DUF83 9 188 1.6E-34 T 11-11-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 ATY42_RS02930 c6182d3d60a537b1b4cc67672c18068a 188 Pfam PF05713 Bacterial mobilisation protein (MobC) 134 154 1.6E-7 T 11-11-2016 IPR008687 Bacterial mobilisation ATY42_RS03785 ecf6d8ed590bbbcacf384ee6731e6751 350 Pfam PF01757 Acyltransferase family 12 328 6.4E-22 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 ATY42_RS18985 5369a59d61fe2afd3becd03155ab0214 117 PIRSF PIRSF021239 6 117 5.4E-51 T 11-11-2016 IPR007437 Putative member of DMT superfamily ATY42_RS18985 5369a59d61fe2afd3becd03155ab0214 117 Pfam PF04342 Putative member of DMT superfamily (DUF486) 13 115 5.6E-45 T 11-11-2016 IPR007437 Putative member of DMT superfamily ATY42_RS03560 4920b2c3e56cee96d5934a08d313733f 64 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 62 2.5E-14 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS05030 a3465cfc3cd7f89c1659ad61766bdf65 104 SUPERFAMILY SSF53335 7 97 1.99E-16 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS05030 a3465cfc3cd7f89c1659ad61766bdf65 104 Gene3D G3DSA:3.40.50.150 7 97 1.0E-15 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS22030 b4b89467b973167b91b9bacc58490911 184 Pfam PF03929 PepSY-associated TM region 22 177 9.1E-19 T 11-11-2016 IPR005625 PepSY-associated TM protein ATY42_RS15815 a40d45a2dbdb73bb1ca07fa96ff1fd11 215 Pfam PF01609 Transposase DDE domain 42 173 2.6E-7 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22880 bd08d086e2dce0510c69b1d5ed0d6f62 83 Pfam PF04226 Transglycosylase associated protein 33 79 2.7E-12 T 11-11-2016 IPR007341 Transglycosylase-associated protein GO:0016021 ATY42_RS17615 6b2aa0ae19dcb8ca49930f8cd8d43747 76 Pfam PF11745 Protein of unknown function (DUF3304) 14 43 1.1E-4 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS04845 86915eed050a761991c768e33626631b 80 Pfam PF16387 Domain of unknown function 7 69 1.6E-12 T 11-11-2016 IPR032160 Domain of unknown function DUF4996 ATY42_RS23090 7fca4ff24d5ceb6e0d1409e5601e94bb 259 Pfam PF05598 Transposase domain (DUF772) 87 160 3.1E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS08155 02ec3b5394867dacb670c8d381f96b37 220 Pfam PF04185 Phosphoesterase family 44 207 2.2E-41 T 11-11-2016 IPR007312 Phosphoesterase GO:0016788 ATY42_RS11795 326ff809b8760aa4ca3ceaed0af30104 458 Pfam PF01609 Transposase DDE domain 284 416 1.3E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11795 326ff809b8760aa4ca3ceaed0af30104 458 Pfam PF05598 Transposase domain (DUF772) 59 132 5.5E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS17600 e03aeee9f542f7d720831115d19ea1fe 76 Pfam PF11745 Protein of unknown function (DUF3304) 14 43 1.1E-4 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS22295 7f9ba4e3d51bf90122174a9430e99211 158 Pfam PF01609 Transposase DDE domain 1 155 4.4E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22345 7f9ba4e3d51bf90122174a9430e99211 158 Pfam PF01609 Transposase DDE domain 1 155 4.4E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS15950 0aae2a25b46a7881f545ab69eb06e3be 363 Pfam PF01757 Acyltransferase family 30 344 3.5E-26 T 11-11-2016 IPR002656 Acyltransferase 3 GO:0016747 ATY42_RS21105 c2e2474c85c13736b220e4e3bdcab143 149 Pfam PF01609 Transposase DDE domain 12 146 3.2E-19 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS02005 28cff826bd3325c1192612cd43346e76 50 Pfam PF08085 Entericidin EcnA/B family 22 42 2.7E-7 T 11-11-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 ATY42_RS06135 0a5298357af8f1f29ea02a93b283774e 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 132 1.9E-10 T 11-11-2016 IPR007140 Protein of unknown function DUF350 ATY42_RS06135 0a5298357af8f1f29ea02a93b283774e 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 5.7E-13 T 11-11-2016 IPR007140 Protein of unknown function DUF350 ATY42_RS20415 9669eb631c5857fbc196e4e995e646e9 219 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 53 92 4.2E-13 T 11-11-2016 IPR011096 FTP domain ATY42_RS05695 457bea01e30c1389021012ad0b1a12c1 153 Gene3D G3DSA:1.20.140.10 18 92 1.0E-4 T 11-11-2016 ATY42_RS05695 457bea01e30c1389021012ad0b1a12c1 153 Pfam PF14316 Domain of unknown function (DUF4381) 7 137 6.3E-31 T 11-11-2016 IPR025489 Protein of unknown function (DUF4381 ATY42_RS04670 831c698e6074d260e44a5d62b3e56ccf 156 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 3.8E-36 T 11-11-2016 IPR021125 Protein of unknown function DUF2127 ATY42_RS20005 441c6aafa399e3305460abd4c2314520 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 303 5.6E-13 T 11-11-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain ATY42_RS20005 441c6aafa399e3305460abd4c2314520 358 SUPERFAMILY SSF111369 64 137 7.72E-11 T 11-11-2016 ATY42_RS20005 441c6aafa399e3305460abd4c2314520 358 Gene3D G3DSA:2.40.50.100 227 257 2.4E-15 T 11-11-2016 ATY42_RS20005 441c6aafa399e3305460abd4c2314520 358 Gene3D G3DSA:2.40.50.100 65 96 2.4E-15 T 11-11-2016 ATY42_RS20005 441c6aafa399e3305460abd4c2314520 358 SUPERFAMILY SSF111369 206 278 3.92E-9 T 11-11-2016 ATY42_RS17360 976eeb0afb03f97d8710f380a65d4b7a 248 Pfam PF14355 Abortive infection C-terminus 77 151 1.6E-14 T 11-11-2016 IPR026001 Abortive infection protein-like, C-terminal domain ATY42_RS12350 091b0c1cbeb01b996cfb52f33fb8efd5 259 Pfam PF05598 Transposase domain (DUF772) 87 160 2.0E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS03045 bb0ac18859b7a31c58aa30255ddc2ac8 885 Pfam PF05650 Domain of unknown function (DUF802) 321 368 2.1E-7 T 11-11-2016 IPR008520 Domain of unknown function DUF802 ATY42_RS03045 bb0ac18859b7a31c58aa30255ddc2ac8 885 Pfam PF05650 Domain of unknown function (DUF802) 383 427 9.8E-8 T 11-11-2016 IPR008520 Domain of unknown function DUF802 ATY42_RS03045 bb0ac18859b7a31c58aa30255ddc2ac8 885 Pfam PF05650 Domain of unknown function (DUF802) 562 614 9.0E-12 T 11-11-2016 IPR008520 Domain of unknown function DUF802 ATY42_RS03045 bb0ac18859b7a31c58aa30255ddc2ac8 885 Pfam PF05650 Domain of unknown function (DUF802) 509 559 6.0E-16 T 11-11-2016 IPR008520 Domain of unknown function DUF802 ATY42_RS14805 2a7b69f54535daec4690ccb8fd10aece 121 Hamap MF_00599 Cell division protein FtsB [ftsB]. 2 93 35.159 T 11-11-2016 IPR023081 Cell division protein FtsB ATY42_RS14805 2a7b69f54535daec4690ccb8fd10aece 121 Pfam PF04977 Septum formation initiator 14 92 6.9E-30 T 11-11-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 ATY42_RS15690 da7ea27ddc28d389d19129eadd3fdd54 196 SUPERFAMILY SSF51445 4 114 2.53E-8 T 11-11-2016 IPR017853 Glycoside hydrolase superfamily ATY42_RS06445 2ae9045c77e0eb4ffab52a47ca4caa77 186 Pfam PF05598 Transposase domain (DUF772) 78 152 1.6E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS06980 dc0e508677d6c6ee3bdf408edace2411 93 Gene3D G3DSA:3.20.20.410 57 90 4.9E-6 T 11-11-2016 IPR002763 Protein of unknown function DUF72 ATY42_RS06980 dc0e508677d6c6ee3bdf408edace2411 93 SUPERFAMILY SSF117396 50 90 1.18E-6 T 11-11-2016 IPR002763 Protein of unknown function DUF72 ATY42_RS09985 21964bfe14eb0d7a4ec771c6b220c78f 149 Pfam PF13936 Helix-turn-helix domain 6 47 6.6E-15 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS16570 1635aab27d0dc4fe03cfe3203f548574 154 Pfam PF09685 Domain of unknown function (DUF4870) 48 153 1.4E-29 T 11-11-2016 IPR019109 Protein of unknown function DUF4870 ATY42_RS06405 be100de8ce189030b6aaa88c3eb2baf9 68 SUPERFAMILY SSF46689 20 64 6.95E-6 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS08635 9a1beca6e005c03836857100906826b8 419 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 92 140 1.0E-8 T 11-11-2016 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain ATY42_RS08635 9a1beca6e005c03836857100906826b8 419 Pfam PF01610 Transposase 155 384 5.6E-62 T 11-11-2016 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain ATY42_RS06095 7cfbbd0edf6919076c9b98857bd59e80 83 SUPERFAMILY SSF142921 4 73 2.35E-6 T 11-11-2016 IPR008893 WGR domain ATY42_RS22415 d8936de0f496c76e0b3439c2afc48009 252 Pfam PF15579 Immunity protein 52 168 241 2.6E-11 T 11-11-2016 IPR028969 Immunity protein 52 ATY42_RS00975 878d3277a17ef982da1a230397c64e32 87 Pfam PF05488 PAAR motif 9 77 2.0E-17 T 11-11-2016 IPR008727 PAAR motif ATY42_RS01765 488724267a93652faa4c82fd626879a4 397 Pfam PF12679 ABC-2 family transporter protein 11 354 3.3E-22 T 11-11-2016 IPR032688 ABC-2 family transporter protein GO:0006810 ATY42_RS06555 3f1295d7b9f635eb701de3a692d78bd1 91 Gene3D G3DSA:3.40.30.10 2 87 1.7E-27 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS06555 3f1295d7b9f635eb701de3a692d78bd1 91 SUPERFAMILY SSF52833 3 84 3.9E-16 T 11-11-2016 IPR012336 Thioredoxin-like fold ATY42_RS16210 190a6a87506cbb79882715987cd39c8e 219 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 20 167 5.2E-36 T 11-11-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ATY42_RS05550 7c93da91a17aacdee6e4c08b4ef85b08 802 Pfam PF07793 Protein of unknown function (DUF1631) 18 788 1.9E-192 T 11-11-2016 IPR012434 Protein of unknown function DUF1631 ATY42_RS07760 abf8da8c490afd987876554ee1c3a638 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 221 4.1E-21 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial ATY42_RS07760 abf8da8c490afd987876554ee1c3a638 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 222 237 4.1E-21 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial ATY42_RS07760 abf8da8c490afd987876554ee1c3a638 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 199 209 4.1E-21 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial ATY42_RS07760 abf8da8c490afd987876554ee1c3a638 287 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 142 159 4.1E-21 T 11-11-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial ATY42_RS07760 abf8da8c490afd987876554ee1c3a638 287 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 18 123 1.2E-26 T 11-11-2016 IPR010627 Peptidase A24A, N-terminal ATY42_RS07760 abf8da8c490afd987876554ee1c3a638 287 Pfam PF01478 Type IV leader peptidase family 133 241 1.8E-23 T 11-11-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ATY42_RS22180 588506c2c47912fe51657dc0dd8c8c16 261 Pfam PF01863 Protein of unknown function DUF45 41 246 2.7E-46 T 11-11-2016 IPR002725 Protein of unknown function DUF45 ATY42_RS16970 5e492aee6e102ad7ae104fbef06ff750 58 Gene3D G3DSA:3.40.630.30 3 50 5.5E-6 T 11-11-2016 IPR016181 Acyl-CoA N-acyltransferase ATY42_RS15430 32c317d46a123ead79b23d1498e2f756 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 1.3E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS21325 7aa49f315cce31a452e265d96b4ae415 87 Pfam PF01527 Transposase 2 70 4.6E-22 T 11-11-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ATY42_RS21325 7aa49f315cce31a452e265d96b4ae415 87 SUPERFAMILY SSF46689 2 68 4.21E-12 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS21325 7aa49f315cce31a452e265d96b4ae415 87 Gene3D G3DSA:1.10.10.60 7 83 1.2E-9 T 11-11-2016 IPR009057 Homeodomain-like GO:0003677 ATY42_RS02575 00c1f00e696200b61dc47cc5acb7c88a 204 Pfam PF14103 Domain of unknown function (DUF4276) 10 199 4.1E-25 T 11-11-2016 IPR025455 Protein of unknown function DUF4276 ATY42_RS06790 1cb06e676dc90ccfab0bcc275a09e18c 774 SUPERFAMILY SSF48452 394 439 2.66E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06790 1cb06e676dc90ccfab0bcc275a09e18c 774 SUPERFAMILY SSF48452 67 170 2.66E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06790 1cb06e676dc90ccfab0bcc275a09e18c 774 SUPERFAMILY SSF48452 486 535 2.66E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06790 1cb06e676dc90ccfab0bcc275a09e18c 774 SUPERFAMILY SSF48452 470 536 1.8E-7 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06790 1cb06e676dc90ccfab0bcc275a09e18c 774 Gene3D G3DSA:1.25.40.10 70 118 1.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS06790 1cb06e676dc90ccfab0bcc275a09e18c 774 Gene3D G3DSA:1.25.40.10 477 555 1.4E-6 T 11-11-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 ATY42_RS21435 6cf86f70acb206f274adfb86e95eee7a 307 SUPERFAMILY SSF52743 2 291 7.07E-36 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS21435 6cf86f70acb206f274adfb86e95eee7a 307 Gene3D G3DSA:3.40.50.200 6 296 1.8E-45 T 11-11-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ATY42_RS00895 9fa03349444fa44af9a36d736a3d7bab 250 Pfam PF05598 Transposase domain (DUF772) 78 151 1.9E-17 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS07445 5ea7a51ba1340ad66f25ca022e926775 263 Pfam PF05433 Glycine zipper 2TM domain 103 143 1.5E-9 T 11-11-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 ATY42_RS09435 355c2f1d0e3c2475e246d65a9bc06f44 131 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 72 128 5.1E-19 T 11-11-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 ATY42_RS13520 50de5284ed6e490fe64b2dcc960db725 313 Pfam PF07920 Protein of unknown function (DUF1684) 171 307 2.7E-43 T 11-11-2016 IPR012467 Protein of unknown function DUF1684 ATY42_RS08985 c4a745a8ea77d38231110c97f266c35d 125 Pfam PF16137 Domain of unknown function (DUF4845) 29 113 1.4E-26 T 11-11-2016 IPR032314 Protein of unknown function DUF4845 ATY42_RS22315 2b4ff23aee071919be193487b6f36762 139 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 4 73 1.9E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS22420 c40b76a9dbaba85f3eb112fbfe40e0ae 261 Pfam PF15648 Restriction endonuclease fold toxin 5 154 233 9.5E-15 T 11-11-2016 IPR028904 Tox-REase-5 domain ATY42_RS23200 bcd7361dfed5c8ad756399fb126854df 185 Pfam PF13503 Domain of unknown function (DUF4123) 23 146 3.1E-21 T 11-11-2016 IPR025391 Domain of unknown function DUF4123 ATY42_RS06380 66892030d0b4e9beeeb48c570345d3d3 388 Pfam PF01594 Domain of unknown function DUF20 18 348 5.4E-59 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like ATY42_RS13740 4b88c01287c4f12b4c21975f519680b1 420 Pfam PF13387 Domain of unknown function (DUF4105) 55 187 3.2E-16 T 11-11-2016 IPR025178 Domain of unknown function DUF4105 ATY42_RS00180 1f86401737997587a19042d3a8ce038b 362 Pfam PF05598 Transposase domain (DUF772) 75 149 6.2E-14 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS05060 38b97b5507146921d5133668c910e57b 564 Pfam PF11394 Protein of unknown function (DUF2875) 105 553 4.3E-165 T 11-11-2016 IPR021531 Protein of unknown function DUF2875 ATY42_RS09150 41813430ec79896fb9c34a0c640dc3aa 175 Pfam PF01863 Protein of unknown function DUF45 105 163 2.1E-12 T 11-11-2016 IPR002725 Protein of unknown function DUF45 ATY42_RS21020 e68fee46998487f1aed0e31b30ca895d 309 SUPERFAMILY SSF53098 2 308 1.21E-27 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS21020 e68fee46998487f1aed0e31b30ca895d 309 Pfam PF01609 Transposase DDE domain 72 308 1.1E-24 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS04875 488e7fc08b977648bdab1f4e1b88e732 143 Pfam PF01609 Transposase DDE domain 1 139 2.6E-22 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS22435 a2f7262354ac9ac53b6cb4ac38d13ecb 144 Pfam PF05488 PAAR motif 12 82 2.8E-23 T 11-11-2016 IPR008727 PAAR motif ATY42_RS04225 a4d05e5fbf5a06dc61bda8fca7872d41 169 Pfam PF02620 Uncharacterized ACR, COG1399 61 167 9.4E-12 T 11-11-2016 IPR003772 Protein of unknown function DUF177 ATY42_RS07310 c94eb548dbf6de579c38d9369eaa03fd 128 Pfam PF13358 DDE superfamily endonuclease 3 88 4.3E-16 T 11-11-2016 ATY42_RS05650 f4053b3501dd20c109b40aedf041bb97 252 Pfam PF05137 Fimbrial assembly protein (PilN) 100 189 1.4E-26 T 11-11-2016 IPR007813 Fimbrial assembly PilN ATY42_RS16725 8702696a6807da1abc568d7c82e918d3 77 Pfam PF04070 Domain of unknown function (DUF378) 2 57 1.4E-18 T 11-11-2016 IPR007211 Protein of unknown function DUF378 ATY42_RS02310 63e024afc9928268500f119738cf6ed8 159 Pfam PF13936 Helix-turn-helix domain 7 49 6.3E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS02100 a9e05256c2fd18452998accbb691987b 368 Pfam PF01594 Domain of unknown function DUF20 34 354 5.9E-44 T 11-11-2016 IPR002549 Transmembrane protein TqsA-like ATY42_RS07185 7b3c686a46c8061064dd3ff3e072a2b0 195 Pfam PF11745 Protein of unknown function (DUF3304) 36 147 9.7E-30 T 11-11-2016 IPR021733 Protein of unknown function DUF3304 ATY42_RS12815 b771bd0651dcd09ae2003177bff652e0 188 Pfam PF16823 Atypical PilZ domain, cyclic di-GMP receptor 46 186 3.9E-48 T 11-11-2016 IPR031800 Cyclic di-GMP receptor, atypical PilZ domain ATY42_RS20590 76b4844ea74482c51d873888d8c58acf 394 SUPERFAMILY SSF53098 14 358 5.23E-28 T 11-11-2016 IPR012337 Ribonuclease H-like domain GO:0003676 ATY42_RS20590 76b4844ea74482c51d873888d8c58acf 394 Pfam PF13546 DDE superfamily endonuclease 1 246 1.4E-80 T 11-11-2016 ATY42_RS23115 d5156691ecd244eff1ad721a58287acb 490 Pfam PF11855 Protein of unknown function (DUF3375) 11 480 2.8E-148 T 11-11-2016 IPR021804 Protein of unknown function DUF3375 ATY42_RS23185 b0dc16d2677f11d5355accda2aff886b 250 Pfam PF15579 Immunity protein 52 169 241 4.3E-19 T 11-11-2016 IPR028969 Immunity protein 52 ATY42_RS17030 1a2c5c934121da50fd5c5844b5569617 530 Pfam PF03929 PepSY-associated TM region 26 470 2.8E-58 T 11-11-2016 IPR005625 PepSY-associated TM protein ATY42_RS15530 a4e887122b7fb1e5a8d661d9808f8a8f 121 Pfam PF13379 NMT1-like family 8 64 5.7E-13 T 11-11-2016 ATY42_RS05935 a9b265eeddc532d602d877b1076a0733 119 Pfam PF12889 Protein of unknown function (DUF3829) 4 102 1.5E-13 T 11-11-2016 IPR024291 Protein of unknown function DUF3829 ATY42_RS08755 85c2f645da8fbc8130079d683be70e39 117 Pfam PF06993 Protein of unknown function (DUF1304) 11 114 8.1E-39 T 11-11-2016 IPR009732 Protein of unknown function DUF1304 ATY42_RS03995 8f750e14e9f4f240f4e2e56d265a8a58 100 Pfam PF04191 Phospholipid methyltransferase 36 99 1.9E-7 T 11-11-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 ATY42_RS06180 cc835803c0c9dbee067f61591be92e0b 250 Pfam PF07277 SapC 7 232 1.8E-64 T 11-11-2016 IPR010836 SapC ATY42_RS20715 9701dbff79c6848048c81d5bfb21ec41 144 Pfam PF05360 yiaA/B two helix domain 10 62 8.4E-21 T 11-11-2016 IPR008024 YiaAB two helix ATY42_RS20715 9701dbff79c6848048c81d5bfb21ec41 144 Pfam PF05360 yiaA/B two helix domain 73 125 1.6E-20 T 11-11-2016 IPR008024 YiaAB two helix ATY42_RS09295 505632b6c52a93fe74e9419d9324b0f5 185 Pfam PF06197 Protein of unknown function (DUF998) 10 157 1.0E-8 T 11-11-2016 IPR009339 Protein of unknown function DUF998 ATY42_RS06825 2442d1d39838a9b2c08d07e08b97df90 346 Pfam PF00487 Fatty acid desaturase 59 301 1.7E-33 T 11-11-2016 IPR005804 Fatty acid desaturase domain GO:0006629 ATY42_RS10940 fbb83b89988e8481400b381bdea7971e 257 SUPERFAMILY SSF53335 15 189 5.47E-28 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS10940 fbb83b89988e8481400b381bdea7971e 257 Gene3D G3DSA:3.40.50.150 23 254 3.0E-25 T 11-11-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ATY42_RS10940 fbb83b89988e8481400b381bdea7971e 257 Pfam PF08241 Methyltransferase domain 48 140 1.0E-13 T 11-11-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 ATY42_RS06025 861b464428c648475bf5d27a796c1494 1002 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 601 757 6.5E-75 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS06025 861b464428c648475bf5d27a796c1494 1002 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 335 537 8.4E-134 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS06795 eacea09d7a045d90d081fe94e8bc8d54 205 Pfam PF01609 Transposase DDE domain 28 163 3.8E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS07790 e1d5ca738905fd24752eb1386b717dad 104 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 30 101 3.5E-12 T 11-11-2016 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 ATY42_RS07790 e1d5ca738905fd24752eb1386b717dad 104 SUPERFAMILY SSF160246 1 102 8.37E-23 T 11-11-2016 ATY42_RS21280 6697e5cfd824386a5f70de84e1e00727 259 Pfam PF05598 Transposase domain (DUF772) 87 160 3.0E-16 T 11-11-2016 IPR008490 Transposase InsH, N-terminal ATY42_RS08150 090897fc62284859456175cec82e30a1 178 Pfam PF04185 Phosphoesterase family 1 133 1.3E-35 T 11-11-2016 IPR007312 Phosphoesterase GO:0016788 ATY42_RS03065 8d829d84cf0bcb34c673c0f8457b330d 83 Pfam PF03692 Putative zinc- or iron-chelating domain 18 57 8.7E-7 T 11-11-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein ATY42_RS09945 68d0ef47a088cc54837e3acafec44703 166 Pfam PF11259 Protein of unknown function (DUF3060) 107 159 1.7E-10 T 11-11-2016 IPR021417 Protein of unknown function DUF3060 ATY42_RS20060 6eda32b9a6af45ecf971b79fd8c38899 223 Pfam PF04340 Protein of unknown function, DUF484 4 223 8.4E-66 T 11-11-2016 IPR007435 Protein of unknown function DUF484 ATY42_RS05765 24f08f9d0c361c61808bd28c3c696239 215 Pfam PF12261 Thermostable hemolysin 14 185 1.8E-57 T 11-11-2016 IPR022050 Thermostable hemolysin ATY42_RS06055 f45ede9c3bc09ad7982ca2ee2e5d66c9 1474 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 289 436 3.9E-94 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS06055 f45ede9c3bc09ad7982ca2ee2e5d66c9 1474 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 539 739 3.6E-129 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS06055 f45ede9c3bc09ad7982ca2ee2e5d66c9 1474 Pfam PF03377 Xanthomonas avirulence protein, Avr/PthA 965 1181 4.3E-142 T 11-11-2016 IPR005042 Avirulence protein Avr-related ATY42_RS05545 0334b8e7c3de328c2488e2d96f905ddc 115 Pfam PF07238 PilZ domain 6 109 3.4E-7 T 11-11-2016 IPR009875 PilZ domain GO:0035438 ATY42_RS16735 8966be09ddea06b653997820b0901ecb 63 SUPERFAMILY SSF103481 1 39 4.97E-6 T 11-11-2016 ATY42_RS00540 8780bb91b16050eaf33be900a116422f 790 Pfam PF05819 NolX protein 331 620 4.8E-151 T 11-11-2016 IPR008718 NolX GO:0009877 ATY42_RS00540 8780bb91b16050eaf33be900a116422f 790 Pfam PF05819 NolX protein 37 268 5.4E-93 T 11-11-2016 IPR008718 NolX GO:0009877 ATY42_RS00540 8780bb91b16050eaf33be900a116422f 790 Pfam PF05819 NolX protein 259 334 4.1E-28 T 11-11-2016 IPR008718 NolX GO:0009877 ATY42_RS09505 c196b1f4afc34238ac2548fc87e8fdaf 470 Pfam PF12040 Domain of unknown function (DUF3526) 279 429 6.1E-29 T 11-11-2016 IPR021913 Protein of unknown function DUF3526 ATY42_RS20075 912c3144a177e3eb8c4d8ffe1bb379f8 132 Pfam PF04304 Protein of unknown function (DUF454) 8 122 3.9E-34 T 11-11-2016 IPR007401 Protein of unknown function DUF454 ATY42_RS20075 912c3144a177e3eb8c4d8ffe1bb379f8 132 PIRSF PIRSF016789 7 127 3.8E-30 T 11-11-2016 IPR007401 Protein of unknown function DUF454 ATY42_RS15855 aad4642359fd57c728ea0d024d12a1dc 199 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 27 101 1.3E-20 T 11-11-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin ATY42_RS19365 08b306042378fddf0a2f490577a71486 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 30 6.7E-11 T 11-11-2016 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 ATY42_RS16070 e249569258d3208bc62cf986bed4455c 169 Pfam PF14341 PilX N-terminal 15 62 9.7E-9 T 11-11-2016 IPR025746 Type 4 fimbrial biogenesis protein PilX, N-terminal domain ATY42_RS00900 3f4dfd47afb8eff0ef9141f52ea04b27 220 Pfam PF01609 Transposase DDE domain 43 178 4.9E-9 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS06350 11416c28224b6627a6d3113d650b8c2b 275 Pfam PF11306 Protein of unknown function (DUF3108) 43 272 1.1E-31 T 11-11-2016 IPR021457 Protein of unknown function DUF3108 ATY42_RS18445 6fd4aaebfda94ba7f4f4c3b15e94556a 118 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 10 75 1.1E-21 T 11-11-2016 IPR025161 Putative transposase IS4/IS5 family ATY42_RS12470 9712668881e9aa8abbb0d36a5c137607 55 Pfam PF01609 Transposase DDE domain 1 54 1.3E-6 T 11-11-2016 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 ATY42_RS11140 ce432e5e92a37684bd242e80c40e34d6 215 Pfam PF05857 TraX protein 6 205 2.0E-40 T 11-11-2016 IPR008875 TraX ATY42_RS03190 74e7031f409ee4c000eaab99d292842f 92 Pfam PF07681 DoxX 6 63 1.5E-9 T 11-11-2016 IPR032808 DoxX family ATY42_RS21315 c18404df719cb5d967f8339642598b30 96 Pfam PF11191 Protein of unknown function (DUF2782) 31 96 7.1E-16 T 11-11-2016 IPR021357 Protein of unknown function DUF2782 ATY42_RS14135 129b99fc9398f3ac8c95cebcb7ca1169 246 Pfam PF01618 MotA/TolQ/ExbB proton channel family 103 219 2.1E-24 T 11-11-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 ATY42_RS22990 6078dd5311f4587c5660765aa7369530 514 Pfam PF02646 RmuC family 214 502 3.3E-75 T 11-11-2016 IPR003798 DNA recombination RmuC ATY42_RS11705 d7ac226cfcd119366cd6da4644f5b203 520 Pfam PF00474 Sodium:solute symporter family 39 439 4.1E-71 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ATY42_RS11705 d7ac226cfcd119366cd6da4644f5b203 520 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 439 7.3E-108 T 11-11-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 ATY42_RS16425 697725999a14305bc0ae057eb4455628 159 Pfam PF13936 Helix-turn-helix domain 7 49 2.9E-16 T 11-11-2016 IPR025246 Transposase IS30-like HTH domain ATY42_RS18625 450560fb8eb676165aad76ca5e65256d 456 SUPERFAMILY SSF103473 174 434 1.03E-7 T 11-11-2016 IPR020846 Major facilitator superfamily domain