PXO_RS00005	SM00382	ATPases associated with a variety of cellular activities
PXO_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
PXO_RS00010	SM00480	DNA polymerase III beta subunit
PXO_RS00020	SM00387	Histidine kinase-like ATPases
PXO_RS00020	SM00433	TopoisomeraseII
PXO_RS00035	SM00028	Tetratricopeptide repeats
PXO_RS00070	SM00155	Phospholipase D. Active site motifs.
PXO_RS00185	SM01126	PXO_RS00185
PXO_RS00270	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS00290	SM00369	Leucine-rich repeats, typical (most populated) subfamily
PXO_RS00395	SM00382	ATPases associated with a variety of cellular activities
PXO_RS00485	SM00267	diguanylate cyclase
PXO_RS00495	SM00642	Alpha-amylase domain
PXO_RS00500	SM00642	Alpha-amylase domain
PXO_RS00510	SM00642	Alpha-amylase domain
PXO_RS00520	SM00642	Alpha-amylase domain
PXO_RS00545	SM01126	PXO_RS00545
PXO_RS00590	SM00487	DEAD-like helicases superfamily
PXO_RS00590	SM00490	helicase superfamily c-terminal domain
PXO_RS00615	SM01126	PXO_RS00615
PXO_RS00670	SM00382	ATPases associated with a variety of cellular activities
PXO_RS00690	SM01126	PXO_RS00690
PXO_RS00715	SM00487	DEAD-like helicases superfamily
PXO_RS00715	SM00490	helicase superfamily c-terminal domain
PXO_RS00790	SM01126	PXO_RS00790
PXO_RS00830	SM00354	helix_turn _helix lactose operon repressor
PXO_RS00850	SM00642	Alpha-amylase domain
PXO_RS00855	SM00642	Alpha-amylase domain
PXO_RS00860	SM00642	Alpha-amylase domain
PXO_RS00870	SM01126	PXO_RS00870
PXO_RS00905	SM00382	ATPases associated with a variety of cellular activities
PXO_RS00915	SM00938	Nitrogen regulatory protein P-II
PXO_RS00925	SM01126	PXO_RS00925
PXO_RS01000	SM01228	PXO_RS01000
PXO_RS01065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS01065	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS01095	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
PXO_RS01115	SM00354	helix_turn _helix lactose operon repressor
PXO_RS01125	SM00563	Phosphate acyltransferases
PXO_RS01155	SM01126	PXO_RS01155
PXO_RS01175	SM01126	PXO_RS01175
PXO_RS01190	SM00382	ATPases associated with a variety of cellular activities
PXO_RS01205	SM00382	ATPases associated with a variety of cellular activities
PXO_RS01235	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS01260	SM00855	Phosphoglycerate mutase family
PXO_RS01265	SM00867	YceI-like domain 
PXO_RS01270	SM00155	Phospholipase D. Active site motifs.
PXO_RS01280	SM00563	Phosphate acyltransferases
PXO_RS01295	SM00028	Tetratricopeptide repeats
PXO_RS01320	SM01230	PXO_RS01320
PXO_RS01325	SM00938	Nitrogen regulatory protein P-II
PXO_RS01335	SM00387	Histidine kinase-like ATPases
PXO_RS01335	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS01340	SM00382	ATPases associated with a variety of cellular activities
PXO_RS01340	SM00448	cheY-homologous receiver domain
PXO_RS01360	SM01126	PXO_RS01360
PXO_RS01410	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS01460	SM01126	PXO_RS01460
PXO_RS01470	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS01495	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS01540	SM00052	Putative diguanylate phosphodiesterase
PXO_RS01600	SM00633	Glycosyl hydrolase family 10
PXO_RS01605	SM00633	Glycosyl hydrolase family 10
PXO_RS01635	SM00758	PXO_RS01635
PXO_RS01635	SM01217	PXO_RS01635
PXO_RS01645	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PXO_RS01660	SM00354	helix_turn _helix lactose operon repressor
PXO_RS01740	SM00382	ATPases associated with a variety of cellular activities
PXO_RS01750	SM00836	DALR anticodon binding domain
PXO_RS01770	SM00382	ATPases associated with a variety of cellular activities
PXO_RS01795	SM00833	Cobalamin synthesis protein cobW C-terminal domain
PXO_RS01865	SM00878	Biotin carboxylase C-terminal domain
PXO_RS01970	SM01126	PXO_RS01970
PXO_RS02040	SM00448	cheY-homologous receiver domain
PXO_RS02040	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS02045	SM00387	Histidine kinase-like ATPases
PXO_RS02050	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS02170	SM00563	Phosphate acyltransferases
PXO_RS02230	SM00357	Cold shock protein domain
PXO_RS02230	SM00382	ATPases associated with a variety of cellular activities
PXO_RS02230	SM00959	Rho termination factor, N-terminal domain
PXO_RS02240	SM00487	DEAD-like helicases superfamily
PXO_RS02240	SM00490	helicase superfamily c-terminal domain
PXO_RS02245	SM00382	ATPases associated with a variety of cellular activities
PXO_RS02255	SM00448	cheY-homologous receiver domain
PXO_RS02260	SM00986	Uracil DNA glycosylase superfamily
PXO_RS02260	SM00987	UreE urease accessory protein, C-terminal domain 
PXO_RS02300	SM00883	Chaperonin 10 Kd subunit
PXO_RS02345	SM01126	PXO_RS02345
PXO_RS02400	SM00944	Pro-kumamolisin, activation domain
PXO_RS02430	SM00867	YceI-like domain 
PXO_RS02445	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS02445	SM00331	Sigma factor PP2C-like phosphatases
PXO_RS02540	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PXO_RS02540	SM00474	3'-5' exonuclease
PXO_RS02540	SM00475	5'-3' exonuclease
PXO_RS02540	SM00482	DNA polymerase A domain
PXO_RS02600	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PXO_RS02605	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS02690	SM00382	ATPases associated with a variety of cellular activities
PXO_RS02690	SM00448	cheY-homologous receiver domain
PXO_RS02695	SM00387	Histidine kinase-like ATPases
PXO_RS02695	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS02720	SM00450	Rhodanese Homology Domain
PXO_RS02735	SM01126	PXO_RS02735
PXO_RS02740	SM01126	PXO_RS02740
PXO_RS02750	SM01150	PXO_RS02750
PXO_RS02850	SM00903	Flavin reductase like domain
PXO_RS02870	SM00100	Cyclic nucleotide-monophosphate binding domain
PXO_RS02870	SM00419	helix_turn_helix, cAMP Regulatory protein
PXO_RS02925	SM01126	PXO_RS02925
PXO_RS03035	SM00487	DEAD-like helicases superfamily
PXO_RS03035	SM00490	helicase superfamily c-terminal domain
PXO_RS03095	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
PXO_RS03095	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
PXO_RS03095	SM00493	PXO_RS03095
PXO_RS03120	SM00257	Lysin motif
PXO_RS03255	SM01126	PXO_RS03255
PXO_RS03270	SM00382	ATPases associated with a variety of cellular activities
PXO_RS03330	SM00400	zinc finger
PXO_RS03330	SM00493	PXO_RS03330
PXO_RS03330	SM00766	DNA primase DnaG DnaB-binding
PXO_RS03365	SM00905	Dihydroneopterin aldolase
PXO_RS03370	SM01217	PXO_RS03370
PXO_RS03380	SM01126	PXO_RS03380
PXO_RS03390	SM01126	PXO_RS03390
PXO_RS03460	SM01126	PXO_RS03460
PXO_RS03475	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PXO_RS03485	SM00644	PXO_RS03485
PXO_RS03580	SM01126	PXO_RS03580
PXO_RS03585	SM00861	Transketolase, pyrimidine binding domain
PXO_RS03615	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS03710	SM00271	DnaJ molecular chaperone homology domain
PXO_RS03725	SM00046	Diacylglycerol kinase catalytic domain (presumed)
PXO_RS03900	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS03910	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS03910	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS03910	SM00091	PAS domain
PXO_RS03910	SM00267	diguanylate cyclase
PXO_RS03925	SM00637	PXO_RS03925
PXO_RS03940	SM00267	diguanylate cyclase
PXO_RS03980	SM00448	cheY-homologous receiver domain
PXO_RS03980	SM00850	LytTr DNA-binding domain
PXO_RS04060	SM00382	ATPases associated with a variety of cellular activities
PXO_RS04060	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS04075	SM01263	PXO_RS04075
PXO_RS04080	SM00267	diguanylate cyclase
PXO_RS04135	SM00268	Actin
PXO_RS04205	SM00936	Penicillin-binding protein 5, C-terminal domain 
PXO_RS04225	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS04230	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS04230	SM00245	tail specific protease
PXO_RS04280	SM01350	PXO_RS04280
PXO_RS04290	SM00749	bacterial OsmY and nodulation domain
PXO_RS04295	SM00387	Histidine kinase-like ATPases
PXO_RS04295	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS04300	SM00448	cheY-homologous receiver domain
PXO_RS04305	SM00387	Histidine kinase-like ATPases
PXO_RS04305	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS04305	SM00448	cheY-homologous receiver domain
PXO_RS04365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PXO_RS04365	SM00866	PXO_RS04365
PXO_RS04375	SM00354	helix_turn _helix lactose operon repressor
PXO_RS04415	SM01126	PXO_RS04415
PXO_RS04450	SM01126	PXO_RS04450
PXO_RS04500	SM01126	PXO_RS04500
PXO_RS04590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS04590	SM00387	Histidine kinase-like ATPases
PXO_RS04590	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS04595	SM00448	cheY-homologous receiver domain
PXO_RS04595	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS04615	SM00829	Enoylreductase
PXO_RS04645	SM00382	ATPases associated with a variety of cellular activities
PXO_RS04755	SM00387	Histidine kinase-like ATPases
PXO_RS04755	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS04760	SM00448	cheY-homologous receiver domain
PXO_RS04760	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS04860	SM00842	Cell division protein FtsA
PXO_RS04865	SM00864	Tubulin/FtsZ family, GTPase domain
PXO_RS04865	SM00865	Tubulin/FtsZ family, C-terminal domain
PXO_RS04885	SM00957	SecA DEAD-like domain
PXO_RS04885	SM00958	SecA preprotein cross-linking domain
PXO_RS04915	SM00829	Enoylreductase
PXO_RS04970	SM00996	S-adenosyl-L-homocysteine hydrolase
PXO_RS04970	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
PXO_RS05115	SM00382	ATPases associated with a variety of cellular activities
PXO_RS05125	SM00448	cheY-homologous receiver domain
PXO_RS05125	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS05130	SM00387	Histidine kinase-like ATPases
PXO_RS05130	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS05195	SM00650	Ribosomal RNA adenine dimethylases
PXO_RS05250	SM01126	PXO_RS05250
PXO_RS05295	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS05395	SM00448	cheY-homologous receiver domain
PXO_RS05400	SM00387	Histidine kinase-like ATPases
PXO_RS05400	SM00448	cheY-homologous receiver domain
PXO_RS05425	SM00421	helix_turn_helix, Lux Regulon
PXO_RS05450	SM01126	PXO_RS05450
PXO_RS05520	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
PXO_RS05520	SM00475	5'-3' exonuclease
PXO_RS05535	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
PXO_RS05535	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
PXO_RS05655	SM00852	Probable molybdopterin binding domain
PXO_RS05660	SM00028	Tetratricopeptide repeats
PXO_RS05665	SM00937	PXO_RS05665
PXO_RS05675	SM00028	Tetratricopeptide repeats
PXO_RS05695	SM01400	PXO_RS05695
PXO_RS05745	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
PXO_RS05745	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PXO_RS05750	SM00649	Ribosomal protein L11/L12
PXO_RS05775	SM00663	RNA polymerase I subunit A N-terminus
PXO_RS05790	SM00838	Elongation factor G C-terminus
PXO_RS05790	SM00889	Elongation factor G, domain IV
PXO_RS05805	SM01403	PXO_RS05805
PXO_RS05825	SM01382	PXO_RS05825
PXO_RS05825	SM01383	PXO_RS05825
PXO_RS05840	SM00322	K homology RNA-binding domain
PXO_RS05860	SM01374	PXO_RS05860
PXO_RS05865	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
PXO_RS05925	SM00363	S4 RNA-binding domain
PXO_RS05925	SM01390	PXO_RS05925
PXO_RS05930	SM00662	RNA polymerases D
PXO_RS05985	SM00990	PXO_RS05985
PXO_RS06015	SM00382	ATPases associated with a variety of cellular activities
PXO_RS06050	SM00448	cheY-homologous receiver domain
PXO_RS06050	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS06055	SM00387	Histidine kinase-like ATPases
PXO_RS06055	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS06090	SM00421	helix_turn_helix, Lux Regulon
PXO_RS06090	SM00448	cheY-homologous receiver domain
PXO_RS06105	SM00478	endonuclease III
PXO_RS06330	SM00855	Phosphoglycerate mutase family
PXO_RS06355	SM00448	cheY-homologous receiver domain
PXO_RS06360	SM00138	Methyltransferase, chemotaxis proteins 
PXO_RS06365	SM00052	Putative diguanylate phosphodiesterase
PXO_RS06365	SM00448	cheY-homologous receiver domain
PXO_RS06370	SM00260	Two component signalling adaptor domain
PXO_RS06375	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS06375	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS06380	SM00260	Two component signalling adaptor domain
PXO_RS06380	SM00387	Histidine kinase-like ATPases
PXO_RS06380	SM01231	PXO_RS06380
PXO_RS06390	SM00073	Histidine Phosphotransfer domain
PXO_RS06400	SM00487	DEAD-like helicases superfamily
PXO_RS06400	SM00490	helicase superfamily c-terminal domain
PXO_RS06400	SM00982	PXO_RS06400
PXO_RS06400	SM01058	CarD-like/TRCF domain
PXO_RS06415	SM00387	Histidine kinase-like ATPases
PXO_RS06415	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS06430	SM00645	Papain family cysteine protease
PXO_RS06470	SM00645	Papain family cysteine protease
PXO_RS06485	SM00645	Papain family cysteine protease
PXO_RS06545	SM00357	Cold shock protein domain
PXO_RS06670	SM00829	Enoylreductase
PXO_RS06690	SM00342	helix_turn_helix, arabinose operon control protein
PXO_RS06690	SM00478	endonuclease III
PXO_RS06690	SM01009	AlkA N-terminal domain
PXO_RS06740	SM00487	DEAD-like helicases superfamily
PXO_RS06740	SM00490	helicase superfamily c-terminal domain
PXO_RS06745	SM00052	Putative diguanylate phosphodiesterase
PXO_RS06745	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS06745	SM00091	PAS domain
PXO_RS06745	SM00267	diguanylate cyclase
PXO_RS06750	SM00363	S4 RNA-binding domain
PXO_RS06780	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS06780	SM00387	Histidine kinase-like ATPases
PXO_RS06780	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS06785	SM00448	cheY-homologous receiver domain
PXO_RS06785	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS06815	SM00382	ATPases associated with a variety of cellular activities
PXO_RS06935	SM00382	ATPases associated with a variety of cellular activities
PXO_RS06935	SM00448	cheY-homologous receiver domain
PXO_RS06940	SM00387	Histidine kinase-like ATPases
PXO_RS06940	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS06950	SM00881	CoA binding domain
PXO_RS07115	SM00904	Riboflavin kinase
PXO_RS07160	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS07265	SM01126	PXO_RS07265
PXO_RS07355	SM00382	ATPases associated with a variety of cellular activities
PXO_RS07355	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS07390	SM00240	Forkhead associated domain
PXO_RS07415	SM00331	Sigma factor PP2C-like phosphatases
PXO_RS07415	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PXO_RS07440	SM00387	Histidine kinase-like ATPases
PXO_RS07450	SM00448	cheY-homologous receiver domain
PXO_RS07450	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS07700	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS07710	SM00382	ATPases associated with a variety of cellular activities
PXO_RS07735	SM01091	Transporter associated domain
PXO_RS07770	SM00387	Histidine kinase-like ATPases
PXO_RS07770	SM00433	TopoisomeraseII
PXO_RS07795	SM01192	PXO_RS07795
PXO_RS07795	SM01193	PXO_RS07795
PXO_RS07820	SM00463	Small MutS-related domain
PXO_RS07840	SM00257	Lysin motif
PXO_RS07850	SM01103	PXO_RS07850
PXO_RS07860	SM00382	ATPases associated with a variety of cellular activities
PXO_RS07900	SM00382	ATPases associated with a variety of cellular activities
PXO_RS07910	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PXO_RS08015	SM00670	Large family of predicted nucleotide-binding domains
PXO_RS08035	SM01130	PXO_RS08035
PXO_RS08060	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PXO_RS08080	SM00758	PXO_RS08080
PXO_RS08125	SM00841	Elongation factor P, C-terminal
PXO_RS08125	SM01185	PXO_RS08125
PXO_RS08130	SM00822	PXO_RS08130
PXO_RS08150	SM00899	PXO_RS08150
PXO_RS08200	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
PXO_RS08210	SM00851	MGS-like domain
PXO_RS08210	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PXO_RS08255	SM00850	LytTr DNA-binding domain
PXO_RS08260	SM00937	PXO_RS08260
PXO_RS08270	SM00448	cheY-homologous receiver domain
PXO_RS08270	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PXO_RS08280	SM00073	Histidine Phosphotransfer domain
PXO_RS08280	SM00387	Histidine kinase-like ATPases
PXO_RS08280	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS08280	SM00448	cheY-homologous receiver domain
PXO_RS08305	SM00966	SpoVT / AbrB like domain 
PXO_RS08325	SM00052	Putative diguanylate phosphodiesterase
PXO_RS08325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS08325	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS08325	SM00091	PAS domain
PXO_RS08325	SM00267	diguanylate cyclase
PXO_RS08330	SM00448	cheY-homologous receiver domain
PXO_RS08340	SM00138	Methyltransferase, chemotaxis proteins 
PXO_RS08345	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08345	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS08365	SM00260	Two component signalling adaptor domain
PXO_RS08385	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08385	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS08390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS08395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS08400	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08400	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS08405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08405	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS08410	SM01126	PXO_RS08410
PXO_RS08415	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS08440	SM00073	Histidine Phosphotransfer domain
PXO_RS08440	SM00260	Two component signalling adaptor domain
PXO_RS08440	SM00387	Histidine kinase-like ATPases
PXO_RS08440	SM01231	PXO_RS08440
PXO_RS08445	SM00448	cheY-homologous receiver domain
PXO_RS08455	SM00260	Two component signalling adaptor domain
PXO_RS08660	SM00354	helix_turn _helix lactose operon repressor
PXO_RS08680	SM01126	PXO_RS08680
PXO_RS08715	SM00448	cheY-homologous receiver domain
PXO_RS08715	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PXO_RS08720	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS08720	SM00091	PAS domain
PXO_RS08720	SM00387	Histidine kinase-like ATPases
PXO_RS08720	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS08720	SM00448	cheY-homologous receiver domain
PXO_RS08720	SM01079	PXO_RS08720
PXO_RS08775	SM00267	diguanylate cyclase
PXO_RS08775	SM00448	cheY-homologous receiver domain
PXO_RS08785	SM01230	PXO_RS08785
PXO_RS08795	SM01230	PXO_RS08795
PXO_RS08820	SM00382	ATPases associated with a variety of cellular activities
PXO_RS08855	SM00116	Domain in cystathionine beta-synthase and other proteins.
PXO_RS08855	SM01091	Transporter associated domain
PXO_RS08880	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS08950	SM01126	PXO_RS08950
PXO_RS08995	SM00528	Domain in histone-like proteins of HNS family
PXO_RS09010	SM00474	3'-5' exonuclease
PXO_RS09050	SM00646	PXO_RS09050
PXO_RS09055	SM00853	MutL C terminal dimerisation domain
PXO_RS09055	SM01340	PXO_RS09055
PXO_RS09075	SM00822	PXO_RS09075
PXO_RS09090	SM00052	Putative diguanylate phosphodiesterase
PXO_RS09090	SM00267	diguanylate cyclase
PXO_RS09100	SM01322	PXO_RS09100
PXO_RS09110	SM00357	Cold shock protein domain
PXO_RS09135	SM00382	ATPases associated with a variety of cellular activities
PXO_RS09135	SM00487	DEAD-like helicases superfamily
PXO_RS09135	SM00490	helicase superfamily c-terminal domain
PXO_RS09140	SM00382	ATPases associated with a variety of cellular activities
PXO_RS09180	SM00052	Putative diguanylate phosphodiesterase
PXO_RS09180	SM00267	diguanylate cyclase
PXO_RS09180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS09190	SM00841	Elongation factor P, C-terminal
PXO_RS09190	SM01185	PXO_RS09190
PXO_RS09295	SM01234	PXO_RS09295
PXO_RS09310	SM00245	tail specific protease
PXO_RS09325	SM00840	PXO_RS09325
PXO_RS09365	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PXO_RS09385	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PXO_RS09395	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PXO_RS09430	SM00382	ATPases associated with a variety of cellular activities
PXO_RS09435	SM00382	ATPases associated with a variety of cellular activities
PXO_RS09445	SM01126	PXO_RS09445
PXO_RS09555	SM00387	Histidine kinase-like ATPases
PXO_RS09685	SM00344	helix_turn_helix ASNC type
PXO_RS09700	SM01323	PXO_RS09700
PXO_RS09755	SM00479	PXO_RS09755
PXO_RS09770	SM00382	ATPases associated with a variety of cellular activities
PXO_RS09815	SM00947	Carbonic anhydrase
PXO_RS09825	SM00478	endonuclease III
PXO_RS09850	SM00450	Rhodanese Homology Domain
PXO_RS09860	SM00644	PXO_RS09860
PXO_RS09880	SM00382	ATPases associated with a variety of cellular activities
PXO_RS09895	SM00981	PXO_RS09895
PXO_RS09925	SM00479	PXO_RS09925
PXO_RS09950	SM00947	Carbonic anhydrase
PXO_RS10005	SM00968	SMC proteins Flexible Hinge Domain
PXO_RS10010	SM00771	ZipA, C-terminal domain (FtsZ-binding)
PXO_RS10020	SM00292	breast cancer carboxy-terminal domain
PXO_RS10020	SM00532	Ligase N family
PXO_RS10040	SM00434	DNA Topoisomerase IV
PXO_RS10090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PXO_RS10090	SM00866	PXO_RS10090
PXO_RS10110	SM00240	Forkhead associated domain
PXO_RS10130	SM00830	Chorismate mutase type II
PXO_RS10150	SM00869	Autotransporter beta-domain
PXO_RS10155	SM00421	helix_turn_helix, Lux Regulon
PXO_RS10155	SM00448	cheY-homologous receiver domain
PXO_RS10160	SM00387	Histidine kinase-like ATPases
PXO_RS10160	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS10180	SM00869	Autotransporter beta-domain
PXO_RS10210	SM00646	PXO_RS10210
PXO_RS10280	SM00052	Putative diguanylate phosphodiesterase
PXO_RS10280	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS10280	SM00267	diguanylate cyclase
PXO_RS10295	SM01217	PXO_RS10295
PXO_RS10300	SM00631	PXO_RS10300
PXO_RS10330	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS10375	SM00382	ATPases associated with a variety of cellular activities
PXO_RS10415	SM00267	diguanylate cyclase
PXO_RS10470	SM00382	ATPases associated with a variety of cellular activities
PXO_RS10510	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PXO_RS10515	SM00226	Low molecular weight phosphatase family
PXO_RS10535	SM00450	Rhodanese Homology Domain
PXO_RS10565	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS10565	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS10565	SM00091	PAS domain
PXO_RS10565	SM00387	Histidine kinase-like ATPases
PXO_RS10565	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS10565	SM00448	cheY-homologous receiver domain
PXO_RS10570	SM00448	cheY-homologous receiver domain
PXO_RS10635	SM00382	ATPases associated with a variety of cellular activities
PXO_RS10685	SM00382	ATPases associated with a variety of cellular activities
PXO_RS10695	SM01126	PXO_RS10695
PXO_RS10700	SM00849	Metallo-beta-lactamase superfamily
PXO_RS10715	SM00382	ATPases associated with a variety of cellular activities
PXO_RS10730	SM00226	Low molecular weight phosphatase family
PXO_RS10740	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PXO_RS10740	SM00465	GIY-YIG type nucleases (URI domain)
PXO_RS10905	SM01126	PXO_RS10905
PXO_RS11105	SM00014	Acid phosphatase homologues
PXO_RS11115	SM00387	Histidine kinase-like ATPases
PXO_RS11120	SM00448	cheY-homologous receiver domain
PXO_RS11130	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS11130	SM00732	Likely ribonuclease with RNase H fold.
PXO_RS11200	SM00479	PXO_RS11200
PXO_RS11210	SM00529	Helix-turn-helix diphteria tox regulatory element
PXO_RS11220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS11275	SM00116	Domain in cystathionine beta-synthase and other proteins.
PXO_RS11275	SM01240	PXO_RS11275
PXO_RS11325	SM00822	PXO_RS11325
PXO_RS11345	SM00411	bacterial (prokaryotic) histone like domain
PXO_RS11350	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS11450	SM00363	S4 RNA-binding domain
PXO_RS11465	SM01126	PXO_RS11465
PXO_RS11480	SM00382	ATPases associated with a variety of cellular activities
PXO_RS11565	SM01007	Class II Aldolase and Adducin N-terminal domain
PXO_RS11605	SM00450	Rhodanese Homology Domain
PXO_RS11615	SM01126	PXO_RS11615
PXO_RS11675	SM00852	Probable molybdopterin binding domain
PXO_RS11680	SM00382	ATPases associated with a variety of cellular activities
PXO_RS11685	SM00564	beta-propeller repeat
PXO_RS11700	SM00028	Tetratricopeptide repeats
PXO_RS11710	SM00562	PXO_RS11710
PXO_RS11750	SM00382	ATPases associated with a variety of cellular activities
PXO_RS11770	SM00382	ATPases associated with a variety of cellular activities
PXO_RS11770	SM00843	PXO_RS11770
PXO_RS11800	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS11805	SM00382	ATPases associated with a variety of cellular activities
PXO_RS11805	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS11830	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS11845	SM00052	Putative diguanylate phosphodiesterase
PXO_RS11845	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS11845	SM00091	PAS domain
PXO_RS11845	SM00267	diguanylate cyclase
PXO_RS11850	SM00091	PAS domain
PXO_RS11850	SM00387	Histidine kinase-like ATPases
PXO_RS11855	SM00052	Putative diguanylate phosphodiesterase
PXO_RS11855	SM00267	diguanylate cyclase
PXO_RS11855	SM00448	cheY-homologous receiver domain
PXO_RS11860	SM00387	Histidine kinase-like ATPases
PXO_RS11875	SM00858	PXO_RS11875
PXO_RS11880	SM00260	Two component signalling adaptor domain
PXO_RS11880	SM00448	cheY-homologous receiver domain
PXO_RS11925	SM00047	Lysozyme subfamily 2
PXO_RS11965	SM00421	helix_turn_helix, Lux Regulon
PXO_RS11965	SM00448	cheY-homologous receiver domain
PXO_RS11975	SM00448	cheY-homologous receiver domain
PXO_RS11980	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12000	SM00822	PXO_RS12000
PXO_RS12005	SM00822	PXO_RS12005
PXO_RS12055	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12110	SM00267	diguanylate cyclase
PXO_RS12115	SM00267	diguanylate cyclase
PXO_RS12120	SM00052	Putative diguanylate phosphodiesterase
PXO_RS12120	SM00267	diguanylate cyclase
PXO_RS12135	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12135	SM00962	SRP54-type protein, GTPase domain
PXO_RS12150	SM00448	cheY-homologous receiver domain
PXO_RS12160	SM00073	Histidine Phosphotransfer domain
PXO_RS12160	SM00260	Two component signalling adaptor domain
PXO_RS12160	SM00387	Histidine kinase-like ATPases
PXO_RS12160	SM01231	PXO_RS12160
PXO_RS12170	SM01126	PXO_RS12170
PXO_RS12205	SM00671	Sel1-like repeats.
PXO_RS12210	SM01126	PXO_RS12210
PXO_RS12345	SM01126	PXO_RS12345
PXO_RS12395	SM01126	PXO_RS12395
PXO_RS12410	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12495	SM01007	Class II Aldolase and Adducin N-terminal domain
PXO_RS12535	SM00450	Rhodanese Homology Domain
PXO_RS12545	SM01126	PXO_RS12545
PXO_RS12605	SM00852	Probable molybdopterin binding domain
PXO_RS12610	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12615	SM00564	beta-propeller repeat
PXO_RS12630	SM00028	Tetratricopeptide repeats
PXO_RS12640	SM00562	PXO_RS12640
PXO_RS12680	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12700	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12700	SM00843	PXO_RS12700
PXO_RS12730	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS12735	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12735	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS12760	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS12775	SM00052	Putative diguanylate phosphodiesterase
PXO_RS12775	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS12775	SM00091	PAS domain
PXO_RS12775	SM00267	diguanylate cyclase
PXO_RS12780	SM00091	PAS domain
PXO_RS12780	SM00387	Histidine kinase-like ATPases
PXO_RS12785	SM00052	Putative diguanylate phosphodiesterase
PXO_RS12785	SM00267	diguanylate cyclase
PXO_RS12785	SM00448	cheY-homologous receiver domain
PXO_RS12790	SM00387	Histidine kinase-like ATPases
PXO_RS12805	SM00858	PXO_RS12805
PXO_RS12810	SM00260	Two component signalling adaptor domain
PXO_RS12810	SM00448	cheY-homologous receiver domain
PXO_RS12855	SM00047	Lysozyme subfamily 2
PXO_RS12895	SM00421	helix_turn_helix, Lux Regulon
PXO_RS12895	SM00448	cheY-homologous receiver domain
PXO_RS12905	SM00448	cheY-homologous receiver domain
PXO_RS12910	SM00382	ATPases associated with a variety of cellular activities
PXO_RS12930	SM00822	PXO_RS12930
PXO_RS12935	SM00822	PXO_RS12935
PXO_RS12985	SM00382	ATPases associated with a variety of cellular activities
PXO_RS13040	SM00267	diguanylate cyclase
PXO_RS13045	SM00267	diguanylate cyclase
PXO_RS13050	SM00052	Putative diguanylate phosphodiesterase
PXO_RS13050	SM00267	diguanylate cyclase
PXO_RS13065	SM00382	ATPases associated with a variety of cellular activities
PXO_RS13065	SM00962	SRP54-type protein, GTPase domain
PXO_RS13080	SM00448	cheY-homologous receiver domain
PXO_RS13090	SM00073	Histidine Phosphotransfer domain
PXO_RS13090	SM00260	Two component signalling adaptor domain
PXO_RS13090	SM00387	Histidine kinase-like ATPases
PXO_RS13090	SM01231	PXO_RS13090
PXO_RS13100	SM01126	PXO_RS13100
PXO_RS13135	SM00671	Sel1-like repeats.
PXO_RS13140	SM01126	PXO_RS13140
PXO_RS13275	SM01126	PXO_RS13275
PXO_RS13325	SM01126	PXO_RS13325
PXO_RS13360	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PXO_RS13370	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS13370	SM00357	Cold shock protein domain
PXO_RS13370	SM00955	PXO_RS13370
PXO_RS13395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
PXO_RS13405	SM01018	B12 binding domain
PXO_RS13425	SM00354	helix_turn _helix lactose operon repressor
PXO_RS13445	SM00984	UDP binding domain
PXO_RS13460	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PXO_RS13465	SM00382	ATPases associated with a variety of cellular activities
PXO_RS13545	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS13550	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
PXO_RS13560	SM00861	Transketolase, pyrimidine binding domain
PXO_RS13585	SM00382	ATPases associated with a variety of cellular activities
PXO_RS13615	SM00271	DnaJ molecular chaperone homology domain
PXO_RS13685	SM00507	HNH nucleases
PXO_RS13690	SM00861	Transketolase, pyrimidine binding domain
PXO_RS13715	SM01126	PXO_RS13715
PXO_RS13760	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS13765	SM00342	helix_turn_helix, arabinose operon control protein
PXO_RS13770	SM00434	DNA Topoisomerase IV
PXO_RS13805	SM00710	Parallel beta-helix repeats
PXO_RS13805	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
PXO_RS13810	SM01172	PXO_RS13810
PXO_RS13840	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PXO_RS13850	SM00972	Spore Coat Protein U domain
PXO_RS13865	SM00972	Spore Coat Protein U domain
PXO_RS13920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS13965	SM00481	DNA polymerase alpha chain like domain
PXO_RS13985	SM00382	ATPases associated with a variety of cellular activities
PXO_RS14035	SM01126	PXO_RS14035
PXO_RS14335	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PXO_RS14340	SM00869	Autotransporter beta-domain
PXO_RS14360	SM00267	diguanylate cyclase
PXO_RS14390	SM00487	DEAD-like helicases superfamily
PXO_RS14390	SM00490	helicase superfamily c-terminal domain
PXO_RS14410	SM00357	Cold shock protein domain
PXO_RS14440	SM01126	PXO_RS14440
PXO_RS14450	SM01118	PXO_RS14450
PXO_RS14460	SM00448	cheY-homologous receiver domain
PXO_RS14475	SM00358	Double-stranded RNA binding motif
PXO_RS14475	SM00535	Ribonuclease III family
PXO_RS14490	SM00838	Elongation factor G C-terminus
PXO_RS14495	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS14545	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS14575	SM00812	Alpha-L-fucosidase
PXO_RS14595	SM00387	Histidine kinase-like ATPases
PXO_RS14595	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS14595	SM00448	cheY-homologous receiver domain
PXO_RS14600	SM00387	Histidine kinase-like ATPases
PXO_RS14600	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS14600	SM00448	cheY-homologous receiver domain
PXO_RS14605	SM00387	Histidine kinase-like ATPases
PXO_RS14605	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS14605	SM00448	cheY-homologous receiver domain
PXO_RS14610	SM00867	YceI-like domain 
PXO_RS14620	SM00867	YceI-like domain 
PXO_RS14675	SM00116	Domain in cystathionine beta-synthase and other proteins.
PXO_RS14755	SM00244	prohibitin homologues
PXO_RS14800	SM00812	Alpha-L-fucosidase
PXO_RS14805	SM00636	PXO_RS14805
PXO_RS14820	SM00758	PXO_RS14820
PXO_RS14820	SM01217	PXO_RS14820
PXO_RS14825	SM00382	ATPases associated with a variety of cellular activities
PXO_RS14860	SM01149	PXO_RS14860
PXO_RS14900	SM00369	Leucine-rich repeats, typical (most populated) subfamily
PXO_RS14915	SM01126	PXO_RS14915
PXO_RS14920	SM00327	von Willebrand factor (vWF) type A domain
PXO_RS14945	SM00260	Two component signalling adaptor domain
PXO_RS14955	SM00073	Histidine Phosphotransfer domain
PXO_RS14955	SM00260	Two component signalling adaptor domain
PXO_RS14955	SM00387	Histidine kinase-like ATPases
PXO_RS14955	SM00448	cheY-homologous receiver domain
PXO_RS14955	SM01231	PXO_RS14955
PXO_RS14960	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PXO_RS14965	SM00260	Two component signalling adaptor domain
PXO_RS14970	SM00448	cheY-homologous receiver domain
PXO_RS14975	SM00448	cheY-homologous receiver domain
PXO_RS15000	SM00491	PXO_RS15000
PXO_RS15025	SM00954	Region found in RelA / SpoT proteins
PXO_RS15080	SM00382	ATPases associated with a variety of cellular activities
PXO_RS15080	SM00487	DEAD-like helicases superfamily
PXO_RS15080	SM00490	helicase superfamily c-terminal domain
PXO_RS15080	SM00847	Helicase associated domain (HA2)  Add an annotation
PXO_RS15090	SM00341	Helicase and RNase D C-terminal
PXO_RS15090	SM00487	DEAD-like helicases superfamily
PXO_RS15090	SM00490	helicase superfamily c-terminal domain
PXO_RS15090	SM00956	PXO_RS15090
PXO_RS15100	SM00448	cheY-homologous receiver domain
PXO_RS15175	SM00382	ATPases associated with a variety of cellular activities
PXO_RS15185	SM00278	Helix-hairpin-helix DNA-binding motif class 1
PXO_RS15220	SM00834	Putative regulatory protein
PXO_RS15260	SM00382	ATPases associated with a variety of cellular activities
PXO_RS15285	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
PXO_RS15285	SM00534	ATPase domain of DNA mismatch repair MUTS family
PXO_RS15375	SM00363	S4 RNA-binding domain
PXO_RS15380	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS15395	SM00421	helix_turn_helix, Lux Regulon
PXO_RS15395	SM00448	cheY-homologous receiver domain
PXO_RS15400	SM00450	Rhodanese Homology Domain
PXO_RS15420	SM00984	UDP binding domain
PXO_RS15485	SM01126	PXO_RS15485
PXO_RS15490	SM01126	PXO_RS15490
PXO_RS15500	SM01126	PXO_RS15500
PXO_RS15510	SM01012	PXO_RS15510
PXO_RS15550	SM00852	Probable molybdopterin binding domain
PXO_RS15565	SM01126	PXO_RS15565
PXO_RS15625	SM00944	Pro-kumamolisin, activation domain
PXO_RS15690	SM01130	PXO_RS15690
PXO_RS15715	SM00342	helix_turn_helix, arabinose operon control protein
PXO_RS15720	SM00382	ATPases associated with a variety of cellular activities
PXO_RS15720	SM00962	SRP54-type protein, GTPase domain
PXO_RS15720	SM00963	SRP54-type protein, helical bundle domain
PXO_RS15730	SM00478	endonuclease III
PXO_RS15740	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS15740	SM00091	PAS domain
PXO_RS15740	SM00387	Histidine kinase-like ATPases
PXO_RS15740	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS15740	SM00448	cheY-homologous receiver domain
PXO_RS15925	SM00422	helix_turn_helix, mercury resistance
PXO_RS15930	SM00411	bacterial (prokaryotic) histone like domain
PXO_RS15935	SM00873	B3/4 domain
PXO_RS15935	SM00874	tRNA synthetase B5 domain
PXO_RS15935	SM00896	Ferredoxin-fold anticodon binding domain
PXO_RS15960	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
PXO_RS15995	SM00487	DEAD-like helicases superfamily
PXO_RS15995	SM00490	helicase superfamily c-terminal domain
PXO_RS16195	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS16340	SM01001	AIR carboxylase
PXO_RS16360	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS16360	SM00322	K homology RNA-binding domain
PXO_RS16365	SM01387	PXO_RS16365
PXO_RS16385	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS16385	SM00322	K homology RNA-binding domain
PXO_RS16435	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
PXO_RS16440	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
PXO_RS16485	SM00822	PXO_RS16485
PXO_RS16515	SM00052	Putative diguanylate phosphodiesterase
PXO_RS16515	SM00267	diguanylate cyclase
PXO_RS16515	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PXO_RS16585	SM00859	Semialdehyde dehydrogenase, NAD binding domain
PXO_RS16615	SM00257	Lysin motif
PXO_RS16655	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS16700	SM01160	PXO_RS16700
PXO_RS16710	SM01126	PXO_RS16710
PXO_RS16760	SM00098	Alkaline phosphatase homologues
PXO_RS16765	SM00977	TilS substrate C-terminal domain
PXO_RS16820	SM00316	Ribosomal protein S1-like RNA-binding domain
PXO_RS16915	SM01126	PXO_RS16915
PXO_RS16965	SM01126	PXO_RS16965
PXO_RS16980	SM00642	Alpha-amylase domain
PXO_RS16990	SM01126	PXO_RS16990
PXO_RS17025	SM00528	Domain in histone-like proteins of HNS family
PXO_RS17060	SM01126	PXO_RS17060
PXO_RS17070	SM00869	Autotransporter beta-domain
PXO_RS17140	SM01126	PXO_RS17140
PXO_RS17150	SM00967	RNA 2'-O ribose methyltransferase substrate binding
PXO_RS17170	SM01126	PXO_RS17170
PXO_RS17245	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS17245	SM00387	Histidine kinase-like ATPases
PXO_RS17275	SM00506	Appr-1"-p processing enzyme
PXO_RS17325	SM01060	PXO_RS17325
PXO_RS17340	SM00091	PAS domain
PXO_RS17340	SM00342	helix_turn_helix, arabinose operon control protein
PXO_RS17390	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PXO_RS17395	SM00481	DNA polymerase alpha chain like domain
PXO_RS17415	SM00966	SpoVT / AbrB like domain 
PXO_RS17435	SM00855	Phosphoglycerate mutase family
PXO_RS17465	SM00220	Serine/Threonine protein kinases, catalytic domain
PXO_RS17510	SM00487	DEAD-like helicases superfamily
PXO_RS17525	SM00487	DEAD-like helicases superfamily
PXO_RS17525	SM00490	helicase superfamily c-terminal domain
PXO_RS17595	SM00382	ATPases associated with a variety of cellular activities
PXO_RS17595	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS17740	SM01126	PXO_RS17740
PXO_RS17755	SM00829	Enoylreductase
PXO_RS17760	SM00267	diguanylate cyclase
PXO_RS17835	SM00732	Likely ribonuclease with RNase H fold.
PXO_RS17875	SM00382	ATPases associated with a variety of cellular activities
PXO_RS17895	SM00411	bacterial (prokaryotic) histone like domain
PXO_RS17930	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
PXO_RS17945	SM00382	ATPases associated with a variety of cellular activities
PXO_RS17985	SM01126	PXO_RS17985
PXO_RS17995	SM01126	PXO_RS17995
PXO_RS18050	SM00342	helix_turn_helix, arabinose operon control protein
PXO_RS18055	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS18090	SM00382	ATPases associated with a variety of cellular activities
PXO_RS18175	SM00855	Phosphoglycerate mutase family
PXO_RS18245	SM00382	ATPases associated with a variety of cellular activities
PXO_RS18245	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS18270	SM00363	S4 RNA-binding domain
PXO_RS18315	SM00382	ATPases associated with a variety of cellular activities
PXO_RS18315	SM00962	SRP54-type protein, GTPase domain
PXO_RS18315	SM00963	SRP54-type protein, helical bundle domain
PXO_RS18340	SM00813	Alpha-L-arabinofuranosidase C-terminus
PXO_RS18475	SM00116	Domain in cystathionine beta-synthase and other proteins.
PXO_RS18495	SM00382	ATPases associated with a variety of cellular activities
PXO_RS18540	SM00924	MgtE intracellular N domain
PXO_RS18575	SM00421	helix_turn_helix, Lux Regulon
PXO_RS18600	SM00849	Metallo-beta-lactamase superfamily
PXO_RS18610	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
PXO_RS18635	SM00422	helix_turn_helix, mercury resistance
PXO_RS18925	SM00448	cheY-homologous receiver domain
PXO_RS18925	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS18935	SM00387	Histidine kinase-like ATPases
PXO_RS18935	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS18940	SM01126	PXO_RS18940
PXO_RS18955	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
PXO_RS18995	SM00849	Metallo-beta-lactamase superfamily
PXO_RS19010	SM00382	ATPases associated with a variety of cellular activities
PXO_RS19030	SM00387	Histidine kinase-like ATPases
PXO_RS19030	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS19035	SM00448	cheY-homologous receiver domain
PXO_RS19035	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS19095	SM00861	Transketolase, pyrimidine binding domain
PXO_RS19115	SM00028	Tetratricopeptide repeats
PXO_RS19115	SM00327	von Willebrand factor (vWF) type A domain
PXO_RS19120	SM00327	von Willebrand factor (vWF) type A domain
PXO_RS19135	SM00382	ATPases associated with a variety of cellular activities
PXO_RS19145	SM00965	Secretin and TonB N terminus short domain
PXO_RS19195	SM00487	DEAD-like helicases superfamily
PXO_RS19195	SM00490	helicase superfamily c-terminal domain
PXO_RS19205	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
PXO_RS19205	SM00954	Region found in RelA / SpoT proteins
PXO_RS19210	SM01409	PXO_RS19210
PXO_RS19220	SM00072	Guanylate kinase homologues.
PXO_RS19245	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS19270	SM01011	Aminopeptidase P, N-terminal domain
PXO_RS19355	SM00919	Malic enzyme, NAD binding domain
PXO_RS19355	SM01274	PXO_RS19355
PXO_RS19370	SM00387	Histidine kinase-like ATPases
PXO_RS19370	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS19370	SM00448	cheY-homologous receiver domain
PXO_RS19400	SM00421	helix_turn_helix, Lux Regulon
PXO_RS19400	SM00448	cheY-homologous receiver domain
PXO_RS19410	SM00387	Histidine kinase-like ATPases
PXO_RS19410	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS19415	SM00448	cheY-homologous receiver domain
PXO_RS19415	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS19430	SM00822	PXO_RS19430
PXO_RS19435	SM00354	helix_turn _helix lactose operon repressor
PXO_RS19450	SM00642	Alpha-amylase domain
PXO_RS19460	SM01154	PXO_RS19460
PXO_RS19490	SM00450	Rhodanese Homology Domain
PXO_RS19545	SM00382	ATPases associated with a variety of cellular activities
PXO_RS19555	SM00460	Transglutaminase/protease-like homologues
PXO_RS19570	SM00493	PXO_RS19570
PXO_RS19580	SM00382	ATPases associated with a variety of cellular activities
PXO_RS19610	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS19615	SM00849	Metallo-beta-lactamase superfamily
PXO_RS19640	SM01126	PXO_RS19640
PXO_RS19710	SM00331	Sigma factor PP2C-like phosphatases
PXO_RS19710	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
PXO_RS19715	SM00479	PXO_RS19715
PXO_RS19730	SM00849	Metallo-beta-lactamase superfamily
PXO_RS19735	SM00257	Lysin motif
PXO_RS19760	SM00411	bacterial (prokaryotic) histone like domain
PXO_RS19765	SM00382	ATPases associated with a variety of cellular activities
PXO_RS19765	SM00464	Found in ATP-dependent protease La (LON)
PXO_RS19770	SM00382	ATPases associated with a variety of cellular activities
PXO_RS19770	SM00994	ClpX C4-type zinc finger
PXO_RS19770	SM01086	C-terminal, D2-small domain, of ClpB protein
PXO_RS19835	SM01329	PXO_RS19835
PXO_RS19840	SM01126	PXO_RS19840
PXO_RS19870	SM00448	cheY-homologous receiver domain
PXO_RS19870	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS19875	SM00387	Histidine kinase-like ATPases
PXO_RS19875	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS19895	SM00014	Acid phosphatase homologues
PXO_RS19935	SM00855	Phosphoglycerate mutase family
PXO_RS19955	SM00829	Enoylreductase
PXO_RS19965	SM00382	ATPases associated with a variety of cellular activities
PXO_RS20010	SM00829	Enoylreductase
PXO_RS20115	SM00838	Elongation factor G C-terminus
PXO_RS20195	SM01126	PXO_RS20195
PXO_RS20260	SM01126	PXO_RS20260
PXO_RS20305	SM00464	Found in ATP-dependent protease La (LON)
PXO_RS20325	SM01126	PXO_RS20325
PXO_RS20335	SM01126	PXO_RS20335
PXO_RS20365	SM00342	helix_turn_helix, arabinose operon control protein
PXO_RS20370	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS20400	SM00917	LeuA allosteric (dimerisation) domain
PXO_RS20405	SM01329	PXO_RS20405
PXO_RS20440	SM01126	PXO_RS20440
PXO_RS20515	SM00788	Adenylosuccinate synthetase
PXO_RS20525	SM00244	prohibitin homologues
PXO_RS20530	SM00244	prohibitin homologues
PXO_RS20535	SM00448	cheY-homologous receiver domain
PXO_RS20540	SM00271	DnaJ molecular chaperone homology domain
PXO_RS20640	SM00382	ATPases associated with a variety of cellular activities
PXO_RS20675	SM00825	Beta-ketoacyl synthase
PXO_RS20685	SM00822	PXO_RS20685
PXO_RS20690	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
PXO_RS20720	SM01126	PXO_RS20720
PXO_RS20725	SM00487	DEAD-like helicases superfamily
PXO_RS20790	SM00345	helix_turn_helix gluconate operon transcriptional repressor
PXO_RS20790	SM00866	PXO_RS20790
PXO_RS20855	SM00382	ATPases associated with a variety of cellular activities
PXO_RS20870	SM01211	PXO_RS20870
PXO_RS20950	SM00656	PXO_RS20950
PXO_RS21005	SM00528	Domain in histone-like proteins of HNS family
PXO_RS21020	SM00382	ATPases associated with a variety of cellular activities
PXO_RS21050	SM00882	Coenzyme A transferase
PXO_RS21055	SM00882	Coenzyme A transferase
PXO_RS21090	SM00893	Electron transfer flavoprotein domain
PXO_RS21095	SM00893	Electron transfer flavoprotein domain
PXO_RS21105	SM00382	ATPases associated with a variety of cellular activities
PXO_RS21160	SM00116	Domain in cystathionine beta-synthase and other proteins.
PXO_RS21195	SM00487	DEAD-like helicases superfamily
PXO_RS21195	SM00490	helicase superfamily c-terminal domain
PXO_RS21220	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS21245	SM00825	Beta-ketoacyl synthase
PXO_RS21335	SM01126	PXO_RS21335
PXO_RS21360	SM00830	Chorismate mutase type II
PXO_RS21370	SM00382	ATPases associated with a variety of cellular activities
PXO_RS21440	SM00986	Uracil DNA glycosylase superfamily
PXO_RS21440	SM00987	UreE urease accessory protein, C-terminal domain 
PXO_RS21465	SM00382	ATPases associated with a variety of cellular activities
PXO_RS21465	SM00930	PXO_RS21465
PXO_RS21535	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PXO_RS21535	SM00091	PAS domain
PXO_RS21535	SM00387	Histidine kinase-like ATPases
PXO_RS21535	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS21535	SM00448	cheY-homologous receiver domain
PXO_RS21555	SM01005	Alanine racemase, C-terminal domain
PXO_RS21565	SM00344	helix_turn_helix ASNC type
PXO_RS21605	SM00448	cheY-homologous receiver domain
PXO_RS21605	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS21610	SM00387	Histidine kinase-like ATPases
PXO_RS21610	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS21645	SM00382	ATPases associated with a variety of cellular activities
PXO_RS21665	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
PXO_RS21670	SM00986	Uracil DNA glycosylase superfamily
PXO_RS21670	SM00987	UreE urease accessory protein, C-terminal domain 
PXO_RS21675	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS21735	SM00850	LytTr DNA-binding domain
PXO_RS21740	SM00448	cheY-homologous receiver domain
PXO_RS21785	SM00138	Methyltransferase, chemotaxis proteins 
PXO_RS21790	SM00448	cheY-homologous receiver domain
PXO_RS21800	SM00382	ATPases associated with a variety of cellular activities
PXO_RS21800	SM00448	cheY-homologous receiver domain
PXO_RS21835	SM01126	PXO_RS21835
PXO_RS21870	SM00878	Biotin carboxylase C-terminal domain
PXO_RS21895	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS21910	SM01126	PXO_RS21910
PXO_RS21965	SM00382	ATPases associated with a variety of cellular activities
PXO_RS22015	SM00912	haemagglutination activity domain
PXO_RS22035	SM01126	PXO_RS22035
PXO_RS22065	SM00798	AICARFT/IMPCHase bienzyme
PXO_RS22065	SM00851	MGS-like domain
PXO_RS22070	SM01209	PXO_RS22070
PXO_RS22070	SM01210	PXO_RS22070
PXO_RS22100	SM00563	Phosphate acyltransferases
PXO_RS22160	SM00052	Putative diguanylate phosphodiesterase
PXO_RS22160	SM00267	diguanylate cyclase
PXO_RS22160	SM00448	cheY-homologous receiver domain
PXO_RS22165	SM00073	Histidine Phosphotransfer domain
PXO_RS22165	SM00387	Histidine kinase-like ATPases
PXO_RS22165	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS22165	SM00448	cheY-homologous receiver domain
PXO_RS22250	SM00470	ParB-like nuclease domain
PXO_RS22270	SM01259	PXO_RS22270
PXO_RS22300	SM00836	DALR anticodon binding domain
PXO_RS22300	SM01016	Arginyl tRNA synthetase N terminal dom
PXO_RS22325	SM00090	RIO-like kinase
PXO_RS22330	SM00346	helix_turn_helix isocitrate lyase regulation
PXO_RS22350	SM00998	Adenylosuccinate lyase C-terminus
PXO_RS22420	SM00881	CoA binding domain
PXO_RS22430	SM00116	Domain in cystathionine beta-synthase and other proteins.
PXO_RS22430	SM00924	MgtE intracellular N domain
PXO_RS22455	SM00226	Low molecular weight phosphatase family
PXO_RS22460	SM00248	ankyrin repeats
PXO_RS22470	SM00825	Beta-ketoacyl synthase
PXO_RS22495	SM00822	PXO_RS22495
PXO_RS22510	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS22510	SM00876	Biotin and Thiamin Synthesis associated domain
PXO_RS22555	SM01060	PXO_RS22555
PXO_RS22600	SM00849	Metallo-beta-lactamase superfamily
PXO_RS22690	SM00387	Histidine kinase-like ATPases
PXO_RS22690	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS22695	SM00448	cheY-homologous receiver domain
PXO_RS22695	SM00862	Transcriptional regulatory protein, C terminal
PXO_RS22720	SM00248	ankyrin repeats
PXO_RS22725	SM01060	PXO_RS22725
PXO_RS22740	SM01126	PXO_RS22740
PXO_RS22750	SM00491	PXO_RS22750
PXO_RS22775	SM00477	DNA/RNA non-specific endonuclease
PXO_RS22775	SM00892	DNA/RNA non-specific endonuclease
PXO_RS22790	SM01004	Delta-aminolevulinic acid dehydratase
PXO_RS22830	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
PXO_RS22850	SM00382	ATPases associated with a variety of cellular activities
PXO_RS22860	SM00530	Helix-turn-helix XRE-family like proteins 
PXO_RS22885	SM00382	ATPases associated with a variety of cellular activities
PXO_RS22925	SM01126	PXO_RS22925
PXO_RS23015	SM00563	Phosphate acyltransferases
PXO_RS23035	SM01321	PXO_RS23035
PXO_RS23040	SM01126	PXO_RS23040
PXO_RS23060	SM00346	helix_turn_helix isocitrate lyase regulation
PXO_RS23080	SM00091	PAS domain
PXO_RS23080	SM00387	Histidine kinase-like ATPases
PXO_RS23080	SM00388	His Kinase A (phosphoacceptor) domain
PXO_RS23080	SM00448	cheY-homologous receiver domain
PXO_RS23110	SM00564	beta-propeller repeat
PXO_RS23175	SM01126	PXO_RS23175
PXO_RS23190	SM00382	ATPases associated with a variety of cellular activities
PXO_RS23240	SM01126	PXO_RS23240
PXO_RS23250	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
PXO_RS23250	SM01232	PXO_RS23250
PXO_RS23305	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
PXO_RS23305	SM00091	PAS domain
PXO_RS23360	SM00829	Enoylreductase
PXO_RS23415	SM00344	helix_turn_helix ASNC type
PXO_RS23465	SM00829	Enoylreductase
PXO_RS23495	SM00487	DEAD-like helicases superfamily
PXO_RS23495	SM00490	helicase superfamily c-terminal domain
PXO_RS23495	SM00847	Helicase associated domain (HA2)  Add an annotation
PXO_RS23505	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
PXO_RS23555	SM00421	helix_turn_helix, Lux Regulon
PXO_RS23555	SM00448	cheY-homologous receiver domain
PXO_RS23670	SM00155	Phospholipase D. Active site motifs.
PXO_RS23695	SM01126	PXO_RS23695
PXO_RS23735	SM00729	Elongator protein 3, MiaB family, Radical SAM
PXO_RS23765	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
PXO_RS23765	SM00245	tail specific protease
PXO_RS23835	SM00347	helix_turn_helix multiple antibiotic resistance protein
PXO_RS23985	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
PXO_RS24010	SM00014	Acid phosphatase homologues
PXO_RS24020	SM00028	Tetratricopeptide repeats
