ACU11_RS00005 SM00382 ATPases associated with a variety of cellular activities ACU11_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ACU11_RS00010 SM00480 DNA polymerase III beta subunit ACU11_RS00020 SM00387 Histidine kinase-like ATPases ACU11_RS00020 SM00433 TopoisomeraseII ACU11_RS00035 SM00028 Tetratricopeptide repeats ACU11_RS00070 SM00155 Phospholipase D. Active site motifs. ACU11_RS00175 SM00382 ATPases associated with a variety of cellular activities ACU11_RS00210 SM01126 ACU11_RS00210 ACU11_RS00215 SM00829 Enoylreductase ACU11_RS00255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS00255 SM00245 tail specific protease ACU11_RS00285 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS00305 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACU11_RS00305 SM01232 ACU11_RS00305 ACU11_RS00355 SM00822 ACU11_RS00355 ACU11_RS00445 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS00470 SM00869 Autotransporter beta-domain ACU11_RS00490 SM00382 ATPases associated with a variety of cellular activities ACU11_RS00635 SM00487 DEAD-like helicases superfamily ACU11_RS00635 SM00490 helicase superfamily c-terminal domain ACU11_RS00655 SM01126 ACU11_RS00655 ACU11_RS00700 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS00875 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS00945 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS00945 SM00091 PAS domain ACU11_RS01040 SM00642 Alpha-amylase domain ACU11_RS01045 SM00642 Alpha-amylase domain ACU11_RS01050 SM00642 Alpha-amylase domain ACU11_RS01065 SM00354 helix_turn _helix lactose operon repressor ACU11_RS01090 SM00344 helix_turn_helix ASNC type ACU11_RS01115 SM00382 ATPases associated with a variety of cellular activities ACU11_RS01130 SM00382 ATPases associated with a variety of cellular activities ACU11_RS01160 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS01185 SM00855 Phosphoglycerate mutase family ACU11_RS01190 SM00867 YceI-like domain ACU11_RS01195 SM00155 Phospholipase D. Active site motifs. ACU11_RS01205 SM00563 Phosphate acyltransferases ACU11_RS01220 SM00028 Tetratricopeptide repeats ACU11_RS01245 SM01230 ACU11_RS01245 ACU11_RS01250 SM00938 Nitrogen regulatory protein P-II ACU11_RS01260 SM00387 Histidine kinase-like ATPases ACU11_RS01260 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS01265 SM00382 ATPases associated with a variety of cellular activities ACU11_RS01265 SM00448 cheY-homologous receiver domain ACU11_RS01285 SM01126 ACU11_RS01285 ACU11_RS01355 SM00450 Rhodanese Homology Domain ACU11_RS01380 SM00387 Histidine kinase-like ATPases ACU11_RS01380 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS01385 SM00382 ATPases associated with a variety of cellular activities ACU11_RS01385 SM00448 cheY-homologous receiver domain ACU11_RS01505 SM00563 Phosphate acyltransferases ACU11_RS01525 SM01321 ACU11_RS01525 ACU11_RS01535 SM00564 beta-propeller repeat ACU11_RS01565 SM00091 PAS domain ACU11_RS01565 SM00387 Histidine kinase-like ATPases ACU11_RS01565 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS01565 SM00448 cheY-homologous receiver domain ACU11_RS01575 SM00346 helix_turn_helix isocitrate lyase regulation ACU11_RS01595 SM00421 helix_turn_helix, Lux Regulon ACU11_RS01595 SM00448 cheY-homologous receiver domain ACU11_RS01700 SM00155 Phospholipase D. Active site motifs. ACU11_RS01740 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS01770 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACU11_RS01770 SM00474 3'-5' exonuclease ACU11_RS01770 SM00475 5'-3' exonuclease ACU11_RS01770 SM00482 DNA polymerase A domain ACU11_RS01775 SM01126 ACU11_RS01775 ACU11_RS01785 SM00822 ACU11_RS01785 ACU11_RS01835 SM00563 Phosphate acyltransferases ACU11_RS01890 SM01126 ACU11_RS01890 ACU11_RS01910 SM00825 Beta-ketoacyl synthase ACU11_RS01920 SM00248 ankyrin repeats ACU11_RS01925 SM00226 Low molecular weight phosphatase family ACU11_RS01965 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_RS01965 SM00924 MgtE intracellular N domain ACU11_RS01975 SM00881 CoA binding domain ACU11_RS02070 SM00487 DEAD-like helicases superfamily ACU11_RS02070 SM00490 helicase superfamily c-terminal domain ACU11_RS02100 SM00326 Src homology 3 domains ACU11_RS02105 SM00861 Transketolase, pyrimidine binding domain ACU11_RS02135 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS02375 SM00400 zinc finger ACU11_RS02375 SM00493 ACU11_RS02375 ACU11_RS02375 SM00766 DNA primase DnaG DnaB-binding ACU11_RS02400 SM00905 Dihydroneopterin aldolase ACU11_RS02405 SM01217 ACU11_RS02405 ACU11_RS02445 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACU11_RS02455 SM00644 ACU11_RS02455 ACU11_RS02500 SM01150 ACU11_RS02500 ACU11_RS02505 SM01126 ACU11_RS02505 ACU11_RS02580 SM00357 Cold shock protein domain ACU11_RS02580 SM00382 ATPases associated with a variety of cellular activities ACU11_RS02580 SM00959 Rho termination factor, N-terminal domain ACU11_RS02590 SM00487 DEAD-like helicases superfamily ACU11_RS02590 SM00490 helicase superfamily c-terminal domain ACU11_RS02595 SM00382 ATPases associated with a variety of cellular activities ACU11_RS02605 SM00448 cheY-homologous receiver domain ACU11_RS02610 SM00986 Uracil DNA glycosylase superfamily ACU11_RS02610 SM00987 UreE urease accessory protein, C-terminal domain ACU11_RS02650 SM00883 Chaperonin 10 Kd subunit ACU11_RS02765 SM01126 ACU11_RS02765 ACU11_RS02830 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACU11_RS02830 SM01232 ACU11_RS02830 ACU11_RS02840 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS02850 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS02850 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS02850 SM00091 PAS domain ACU11_RS02850 SM00267 diguanylate cyclase ACU11_RS02870 SM00267 diguanylate cyclase ACU11_RS02895 SM00448 cheY-homologous receiver domain ACU11_RS02895 SM00850 LytTr DNA-binding domain ACU11_RS02975 SM00382 ATPases associated with a variety of cellular activities ACU11_RS02975 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_RS03005 SM00267 diguanylate cyclase ACU11_RS03010 SM01263 ACU11_RS03010 ACU11_RS03030 SM00268 Actin ACU11_RS03090 SM00936 Penicillin-binding protein 5, C-terminal domain ACU11_RS03110 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS03115 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS03115 SM00245 tail specific protease ACU11_RS03165 SM01350 ACU11_RS03165 ACU11_RS03180 SM00749 bacterial OsmY and nodulation domain ACU11_RS03185 SM00387 Histidine kinase-like ATPases ACU11_RS03185 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS03190 SM00448 cheY-homologous receiver domain ACU11_RS03195 SM00387 Histidine kinase-like ATPases ACU11_RS03195 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS03195 SM00448 cheY-homologous receiver domain ACU11_RS03245 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_RS03245 SM00866 ACU11_RS03245 ACU11_RS03255 SM00354 helix_turn _helix lactose operon repressor ACU11_RS03360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS03360 SM00387 Histidine kinase-like ATPases ACU11_RS03360 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS03385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS03385 SM00387 Histidine kinase-like ATPases ACU11_RS03385 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS03390 SM00448 cheY-homologous receiver domain ACU11_RS03390 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS03405 SM00829 Enoylreductase ACU11_RS03435 SM00382 ATPases associated with a variety of cellular activities ACU11_RS03520 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACU11_RS03550 SM00387 Histidine kinase-like ATPases ACU11_RS03550 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS03555 SM00448 cheY-homologous receiver domain ACU11_RS03555 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS03660 SM00842 Cell division protein FtsA ACU11_RS03665 SM00864 Tubulin/FtsZ family, GTPase domain ACU11_RS03665 SM00865 Tubulin/FtsZ family, C-terminal domain ACU11_RS03685 SM00957 SecA DEAD-like domain ACU11_RS03685 SM00958 SecA preprotein cross-linking domain ACU11_RS03715 SM00829 Enoylreductase ACU11_RS03720 SM00944 Pro-kumamolisin, activation domain ACU11_RS03765 SM00996 S-adenosyl-L-homocysteine hydrolase ACU11_RS03765 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ACU11_RS03895 SM00382 ATPases associated with a variety of cellular activities ACU11_RS03905 SM00448 cheY-homologous receiver domain ACU11_RS03905 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS03910 SM00387 Histidine kinase-like ATPases ACU11_RS03910 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS03970 SM00650 Ribosomal RNA adenine dimethylases ACU11_RS04065 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS04130 SM00448 cheY-homologous receiver domain ACU11_RS04135 SM00421 helix_turn_helix, Lux Regulon ACU11_RS04205 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACU11_RS04205 SM00475 5'-3' exonuclease ACU11_RS04220 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACU11_RS04220 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACU11_RS04320 SM00852 Probable molybdopterin binding domain ACU11_RS04325 SM00028 Tetratricopeptide repeats ACU11_RS04330 SM00937 ACU11_RS04330 ACU11_RS04340 SM00028 Tetratricopeptide repeats ACU11_RS04360 SM01400 ACU11_RS04360 ACU11_RS04410 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ACU11_RS04410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACU11_RS04415 SM00649 Ribosomal protein L11/L12 ACU11_RS04440 SM00663 RNA polymerase I subunit A N-terminus ACU11_RS04455 SM00838 Elongation factor G C-terminus ACU11_RS04455 SM00889 Elongation factor G, domain IV ACU11_RS04470 SM01403 ACU11_RS04470 ACU11_RS04490 SM01382 ACU11_RS04490 ACU11_RS04490 SM01383 ACU11_RS04490 ACU11_RS04505 SM00322 K homology RNA-binding domain ACU11_RS04525 SM01374 ACU11_RS04525 ACU11_RS04530 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACU11_RS04590 SM00363 S4 RNA-binding domain ACU11_RS04590 SM01390 ACU11_RS04590 ACU11_RS04595 SM00662 RNA polymerases D ACU11_RS04610 SM01126 ACU11_RS04610 ACU11_RS04640 SM00838 Elongation factor G C-terminus ACU11_RS04710 SM00829 Enoylreductase ACU11_RS04755 SM00382 ATPases associated with a variety of cellular activities ACU11_RS04765 SM00829 Enoylreductase ACU11_RS04790 SM00855 Phosphoglycerate mutase family ACU11_RS04840 SM00014 Acid phosphatase homologues ACU11_RS04860 SM00387 Histidine kinase-like ATPases ACU11_RS04860 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS04865 SM00448 cheY-homologous receiver domain ACU11_RS04865 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS04885 SM01329 ACU11_RS04885 ACU11_RS04945 SM00382 ATPases associated with a variety of cellular activities ACU11_RS04945 SM00994 ClpX C4-type zinc finger ACU11_RS04945 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_RS04950 SM00382 ATPases associated with a variety of cellular activities ACU11_RS04950 SM00464 Found in ATP-dependent protease La (LON) ACU11_RS04955 SM00411 bacterial (prokaryotic) histone like domain ACU11_RS04980 SM00257 Lysin motif ACU11_RS04985 SM00849 Metallo-beta-lactamase superfamily ACU11_RS05000 SM00479 ACU11_RS05000 ACU11_RS05005 SM00331 Sigma factor PP2C-like phosphatases ACU11_RS05005 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACU11_RS05100 SM00507 HNH nucleases ACU11_RS05265 SM00849 Metallo-beta-lactamase superfamily ACU11_RS05270 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS05300 SM00382 ATPases associated with a variety of cellular activities ACU11_RS05310 SM00493 ACU11_RS05310 ACU11_RS05325 SM00460 Transglutaminase/protease-like homologues ACU11_RS05335 SM00382 ATPases associated with a variety of cellular activities ACU11_RS05375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACU11_RS05380 SM00822 ACU11_RS05380 ACU11_RS05390 SM00825 Beta-ketoacyl synthase ACU11_RS05430 SM00382 ATPases associated with a variety of cellular activities ACU11_RS05465 SM01321 ACU11_RS05465 ACU11_RS05500 SM00271 DnaJ molecular chaperone homology domain ACU11_RS05505 SM00448 cheY-homologous receiver domain ACU11_RS05510 SM00244 prohibitin homologues ACU11_RS05515 SM00244 prohibitin homologues ACU11_RS05525 SM00788 Adenylosuccinate synthetase ACU11_RS05575 SM00487 DEAD-like helicases superfamily ACU11_RS05575 SM00490 helicase superfamily c-terminal domain ACU11_RS05590 SM00487 DEAD-like helicases superfamily ACU11_RS05620 SM00220 Serine/Threonine protein kinases, catalytic domain ACU11_RS05645 SM00855 Phosphoglycerate mutase family ACU11_RS05665 SM00966 SpoVT / AbrB like domain ACU11_RS05685 SM00481 DNA polymerase alpha chain like domain ACU11_RS05690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_RS05725 SM00091 PAS domain ACU11_RS05725 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS05745 SM01060 ACU11_RS05745 ACU11_RS05760 SM00990 ACU11_RS05760 ACU11_RS05785 SM00382 ATPases associated with a variety of cellular activities ACU11_RS05825 SM00448 cheY-homologous receiver domain ACU11_RS05825 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS05830 SM00387 Histidine kinase-like ATPases ACU11_RS05830 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS05865 SM00421 helix_turn_helix, Lux Regulon ACU11_RS05865 SM00448 cheY-homologous receiver domain ACU11_RS05880 SM00478 endonuclease III ACU11_RS06190 SM00382 ATPases associated with a variety of cellular activities ACU11_RS06190 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_RS06400 SM00422 helix_turn_helix, mercury resistance ACU11_RS06425 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACU11_RS06435 SM00849 Metallo-beta-lactamase superfamily ACU11_RS06460 SM00421 helix_turn_helix, Lux Regulon ACU11_RS06490 SM00924 MgtE intracellular N domain ACU11_RS06535 SM00382 ATPases associated with a variety of cellular activities ACU11_RS06555 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_RS06695 SM00382 ATPases associated with a variety of cellular activities ACU11_RS06710 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ACU11_RS06745 SM00411 bacterial (prokaryotic) histone like domain ACU11_RS06760 SM00382 ATPases associated with a variety of cellular activities ACU11_RS06800 SM00732 Likely ribonuclease with RNase H fold. ACU11_RS06880 SM00267 diguanylate cyclase ACU11_RS06885 SM00829 Enoylreductase ACU11_RS06900 SM01092 CO dehydrogenase flavoprotein C-terminal domain ACU11_RS06905 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ACU11_RS07035 SM00855 Phosphoglycerate mutase family ACU11_RS07140 SM00448 cheY-homologous receiver domain ACU11_RS07145 SM00138 Methyltransferase, chemotaxis proteins ACU11_RS07150 SM00052 Putative diguanylate phosphodiesterase ACU11_RS07150 SM00448 cheY-homologous receiver domain ACU11_RS07155 SM00260 Two component signalling adaptor domain ACU11_RS07160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS07160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS07165 SM00073 Histidine Phosphotransfer domain ACU11_RS07165 SM00260 Two component signalling adaptor domain ACU11_RS07165 SM00387 Histidine kinase-like ATPases ACU11_RS07165 SM01231 ACU11_RS07165 ACU11_RS07175 SM00487 DEAD-like helicases superfamily ACU11_RS07175 SM00490 helicase superfamily c-terminal domain ACU11_RS07175 SM00982 ACU11_RS07175 ACU11_RS07175 SM01058 CarD-like/TRCF domain ACU11_RS07190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS07190 SM00387 Histidine kinase-like ATPases ACU11_RS07190 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS07195 SM00645 Papain family cysteine protease ACU11_RS07275 SM00829 Enoylreductase ACU11_RS07295 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS07295 SM00478 endonuclease III ACU11_RS07295 SM01009 AlkA N-terminal domain ACU11_RS07335 SM00487 DEAD-like helicases superfamily ACU11_RS07335 SM00490 helicase superfamily c-terminal domain ACU11_RS07340 SM00052 Putative diguanylate phosphodiesterase ACU11_RS07340 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS07340 SM00091 PAS domain ACU11_RS07340 SM00267 diguanylate cyclase ACU11_RS07345 SM00363 S4 RNA-binding domain ACU11_RS07375 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS07375 SM00387 Histidine kinase-like ATPases ACU11_RS07375 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS07380 SM00448 cheY-homologous receiver domain ACU11_RS07380 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS07410 SM00382 ATPases associated with a variety of cellular activities ACU11_RS07540 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS07585 SM01351 ACU11_RS07585 ACU11_RS07600 SM00977 TilS substrate C-terminal domain ACU11_RS07605 SM00098 Alkaline phosphatase homologues ACU11_RS07705 SM01160 ACU11_RS07705 ACU11_RS07715 SM01126 ACU11_RS07715 ACU11_RS07800 SM00271 DnaJ molecular chaperone homology domain ACU11_RS07825 SM00382 ATPases associated with a variety of cellular activities ACU11_RS07850 SM00861 Transketolase, pyrimidine binding domain ACU11_RS07860 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACU11_RS07865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS07920 SM00382 ATPases associated with a variety of cellular activities ACU11_RS07925 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_RS07945 SM00984 UDP binding domain ACU11_RS07965 SM00354 helix_turn _helix lactose operon repressor ACU11_RS07995 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACU11_RS08020 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS08020 SM00357 Cold shock protein domain ACU11_RS08020 SM00955 ACU11_RS08020 ACU11_RS08030 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACU11_RS08035 SM00267 diguanylate cyclase ACU11_RS08040 SM00479 ACU11_RS08040 ACU11_RS08055 SM00382 ATPases associated with a variety of cellular activities ACU11_RS08090 SM00947 Carbonic anhydrase ACU11_RS08100 SM00478 endonuclease III ACU11_RS08125 SM00450 Rhodanese Homology Domain ACU11_RS08135 SM00644 ACU11_RS08135 ACU11_RS08165 SM00981 ACU11_RS08165 ACU11_RS08195 SM00479 ACU11_RS08195 ACU11_RS08220 SM00947 Carbonic anhydrase ACU11_RS08270 SM00968 SMC proteins Flexible Hinge Domain ACU11_RS08275 SM00771 ZipA, C-terminal domain (FtsZ-binding) ACU11_RS08285 SM00292 breast cancer carboxy-terminal domain ACU11_RS08285 SM00532 Ligase N family ACU11_RS08305 SM00434 DNA Topoisomerase IV ACU11_RS08330 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACU11_RS08355 SM00873 B3/4 domain ACU11_RS08355 SM00874 tRNA synthetase B5 domain ACU11_RS08355 SM00896 Ferredoxin-fold anticodon binding domain ACU11_RS08360 SM00411 bacterial (prokaryotic) histone like domain ACU11_RS08365 SM00422 helix_turn_helix, mercury resistance ACU11_RS08450 SM00861 Transketolase, pyrimidine binding domain ACU11_RS08455 SM00507 HNH nucleases ACU11_RS08500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS08500 SM00091 PAS domain ACU11_RS08500 SM00387 Histidine kinase-like ATPases ACU11_RS08500 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS08500 SM00448 cheY-homologous receiver domain ACU11_RS08510 SM00478 endonuclease III ACU11_RS08520 SM00382 ATPases associated with a variety of cellular activities ACU11_RS08520 SM00962 SRP54-type protein, GTPase domain ACU11_RS08520 SM00963 SRP54-type protein, helical bundle domain ACU11_RS08525 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS08550 SM01130 ACU11_RS08550 ACU11_RS08615 SM00944 Pro-kumamolisin, activation domain ACU11_RS08670 SM00387 Histidine kinase-like ATPases ACU11_RS08740 SM00344 helix_turn_helix ASNC type ACU11_RS08755 SM01323 ACU11_RS08755 ACU11_RS08790 SM00248 ankyrin repeats ACU11_RS08835 SM00354 helix_turn _helix lactose operon repressor ACU11_RS08875 SM00448 cheY-homologous receiver domain ACU11_RS08875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_RS08880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS08880 SM00091 PAS domain ACU11_RS08880 SM00387 Histidine kinase-like ATPases ACU11_RS08880 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS08880 SM00448 cheY-homologous receiver domain ACU11_RS08880 SM01079 ACU11_RS08880 ACU11_RS08925 SM00267 diguanylate cyclase ACU11_RS08925 SM00448 cheY-homologous receiver domain ACU11_RS08935 SM01230 ACU11_RS08935 ACU11_RS08945 SM01230 ACU11_RS08945 ACU11_RS09010 SM01126 ACU11_RS09010 ACU11_RS09040 SM00382 ATPases associated with a variety of cellular activities ACU11_RS09070 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_RS09070 SM01091 Transporter associated domain ACU11_RS09095 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS09160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS09160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS09165 SM00260 Two component signalling adaptor domain ACU11_RS09170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS09170 SM00267 diguanylate cyclase ACU11_RS09200 SM00470 ParB-like nuclease domain ACU11_RS09310 SM00528 Domain in histone-like proteins of HNS family ACU11_RS09325 SM00474 3'-5' exonuclease ACU11_RS09360 SM00646 ACU11_RS09360 ACU11_RS09365 SM00853 MutL C terminal dimerisation domain ACU11_RS09365 SM01340 ACU11_RS09365 ACU11_RS09385 SM00822 ACU11_RS09385 ACU11_RS09400 SM00052 Putative diguanylate phosphodiesterase ACU11_RS09400 SM00267 diguanylate cyclase ACU11_RS09410 SM01322 ACU11_RS09410 ACU11_RS09420 SM00357 Cold shock protein domain ACU11_RS09445 SM00382 ATPases associated with a variety of cellular activities ACU11_RS09445 SM00487 DEAD-like helicases superfamily ACU11_RS09445 SM00490 helicase superfamily c-terminal domain ACU11_RS09450 SM00382 ATPases associated with a variety of cellular activities ACU11_RS09490 SM00052 Putative diguanylate phosphodiesterase ACU11_RS09490 SM00267 diguanylate cyclase ACU11_RS09490 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS09500 SM00841 Elongation factor P, C-terminal ACU11_RS09500 SM01185 ACU11_RS09500 ACU11_RS09550 SM00507 HNH nucleases ACU11_RS09595 SM00670 Large family of predicted nucleotide-binding domains ACU11_RS09615 SM01130 ACU11_RS09615 ACU11_RS09640 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACU11_RS09685 SM00646 ACU11_RS09685 ACU11_RS09755 SM00052 Putative diguanylate phosphodiesterase ACU11_RS09755 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS09755 SM00267 diguanylate cyclase ACU11_RS09765 SM00448 cheY-homologous receiver domain ACU11_RS09770 SM00387 Histidine kinase-like ATPases ACU11_RS09780 SM00014 Acid phosphatase homologues ACU11_RS09975 SM01007 Class II Aldolase and Adducin N-terminal domain ACU11_RS10020 SM00841 Elongation factor P, C-terminal ACU11_RS10020 SM01185 ACU11_RS10020 ACU11_RS10025 SM00822 ACU11_RS10025 ACU11_RS10045 SM00899 ACU11_RS10045 ACU11_RS10085 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ACU11_RS10095 SM00851 MGS-like domain ACU11_RS10095 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACU11_RS10125 SM00850 LytTr DNA-binding domain ACU11_RS10130 SM00937 ACU11_RS10130 ACU11_RS10140 SM00448 cheY-homologous receiver domain ACU11_RS10140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_RS10145 SM00073 Histidine Phosphotransfer domain ACU11_RS10145 SM00387 Histidine kinase-like ATPases ACU11_RS10145 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS10145 SM00448 cheY-homologous receiver domain ACU11_RS10170 SM00966 SpoVT / AbrB like domain ACU11_RS10190 SM00052 Putative diguanylate phosphodiesterase ACU11_RS10190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS10190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS10190 SM00091 PAS domain ACU11_RS10190 SM00267 diguanylate cyclase ACU11_RS10195 SM00448 cheY-homologous receiver domain ACU11_RS10205 SM00138 Methyltransferase, chemotaxis proteins ACU11_RS10210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10220 SM00260 Two component signalling adaptor domain ACU11_RS10230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10260 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10265 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS10295 SM00073 Histidine Phosphotransfer domain ACU11_RS10295 SM00260 Two component signalling adaptor domain ACU11_RS10295 SM00387 Histidine kinase-like ATPases ACU11_RS10295 SM01231 ACU11_RS10295 ACU11_RS10300 SM00448 cheY-homologous receiver domain ACU11_RS10310 SM00260 Two component signalling adaptor domain ACU11_RS10425 SM00073 Histidine Phosphotransfer domain ACU11_RS10425 SM00260 Two component signalling adaptor domain ACU11_RS10425 SM00387 Histidine kinase-like ATPases ACU11_RS10425 SM01231 ACU11_RS10425 ACU11_RS10435 SM00448 cheY-homologous receiver domain ACU11_RS10450 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10450 SM00962 SRP54-type protein, GTPase domain ACU11_RS10465 SM00052 Putative diguanylate phosphodiesterase ACU11_RS10465 SM00267 diguanylate cyclase ACU11_RS10470 SM00267 diguanylate cyclase ACU11_RS10480 SM00267 diguanylate cyclase ACU11_RS10530 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10560 SM01126 ACU11_RS10560 ACU11_RS10585 SM00822 ACU11_RS10585 ACU11_RS10605 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10610 SM00448 cheY-homologous receiver domain ACU11_RS10620 SM00421 helix_turn_helix, Lux Regulon ACU11_RS10620 SM00448 cheY-homologous receiver domain ACU11_RS10660 SM00047 Lysozyme subfamily 2 ACU11_RS10705 SM00260 Two component signalling adaptor domain ACU11_RS10705 SM00448 cheY-homologous receiver domain ACU11_RS10710 SM00858 ACU11_RS10710 ACU11_RS10725 SM00387 Histidine kinase-like ATPases ACU11_RS10730 SM00052 Putative diguanylate phosphodiesterase ACU11_RS10730 SM00267 diguanylate cyclase ACU11_RS10730 SM00448 cheY-homologous receiver domain ACU11_RS10735 SM00091 PAS domain ACU11_RS10735 SM00387 Histidine kinase-like ATPases ACU11_RS10740 SM00052 Putative diguanylate phosphodiesterase ACU11_RS10740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS10740 SM00091 PAS domain ACU11_RS10740 SM00267 diguanylate cyclase ACU11_RS10765 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS10790 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10790 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_RS10795 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS10825 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10825 SM00843 ACU11_RS10825 ACU11_RS10845 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10885 SM00562 ACU11_RS10885 ACU11_RS10895 SM00028 Tetratricopeptide repeats ACU11_RS10910 SM00564 beta-propeller repeat ACU11_RS10915 SM00382 ATPases associated with a variety of cellular activities ACU11_RS10920 SM00852 Probable molybdopterin binding domain ACU11_RS10930 SM00450 Rhodanese Homology Domain ACU11_RS10990 SM00852 Probable molybdopterin binding domain ACU11_RS11065 SM00052 Putative diguanylate phosphodiesterase ACU11_RS11075 SM00869 Autotransporter beta-domain ACU11_RS11080 SM00421 helix_turn_helix, Lux Regulon ACU11_RS11080 SM00448 cheY-homologous receiver domain ACU11_RS11085 SM00387 Histidine kinase-like ATPases ACU11_RS11085 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS11105 SM00869 Autotransporter beta-domain ACU11_RS11215 SM01126 ACU11_RS11215 ACU11_RS11295 SM00448 cheY-homologous receiver domain ACU11_RS11295 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS11305 SM00387 Histidine kinase-like ATPases ACU11_RS11330 SM00331 Sigma factor PP2C-like phosphatases ACU11_RS11330 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACU11_RS11355 SM00240 Forkhead associated domain ACU11_RS11385 SM00382 ATPases associated with a variety of cellular activities ACU11_RS11385 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_RS11510 SM00363 S4 RNA-binding domain ACU11_RS11515 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS11520 SM00421 helix_turn_helix, Lux Regulon ACU11_RS11520 SM00448 cheY-homologous receiver domain ACU11_RS11525 SM00450 Rhodanese Homology Domain ACU11_RS11545 SM00984 UDP binding domain ACU11_RS11560 SM00823 Phosphopantetheine attachment site ACU11_RS11560 SM00824 Thioesterase ACU11_RS11570 SM01126 ACU11_RS11570 ACU11_RS11610 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACU11_RS11610 SM00465 GIY-YIG type nucleases (URI domain) ACU11_RS11620 SM00226 Low molecular weight phosphatase family ACU11_RS11635 SM00382 ATPases associated with a variety of cellular activities ACU11_RS11650 SM00849 Metallo-beta-lactamase superfamily ACU11_RS11665 SM00382 ATPases associated with a variety of cellular activities ACU11_RS11715 SM00382 ATPases associated with a variety of cellular activities ACU11_RS11820 SM01126 ACU11_RS11820 ACU11_RS11860 SM00382 ATPases associated with a variety of cellular activities ACU11_RS11875 SM00220 Serine/Threonine protein kinases, catalytic domain ACU11_RS11875 SM01260 ACU11_RS11875 ACU11_RS11920 SM00448 cheY-homologous receiver domain ACU11_RS11925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS11925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS11925 SM00091 PAS domain ACU11_RS11925 SM00387 Histidine kinase-like ATPases ACU11_RS11925 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS11925 SM00448 cheY-homologous receiver domain ACU11_RS11930 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS11930 SM00732 Likely ribonuclease with RNase H fold. ACU11_RS12000 SM00479 ACU11_RS12000 ACU11_RS12010 SM00529 Helix-turn-helix diphteria tox regulatory element ACU11_RS12025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS12080 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_RS12080 SM01240 ACU11_RS12080 ACU11_RS12110 SM00822 ACU11_RS12110 ACU11_RS12130 SM00411 bacterial (prokaryotic) histone like domain ACU11_RS12135 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS12210 SM00354 helix_turn _helix lactose operon repressor ACU11_RS12235 SM00363 S4 RNA-binding domain ACU11_RS12260 SM00382 ATPases associated with a variety of cellular activities ACU11_RS12320 SM00382 ATPases associated with a variety of cellular activities ACU11_RS12325 SM00382 ATPases associated with a variety of cellular activities ACU11_RS12360 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACU11_RS12370 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ACU11_RS12390 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACU11_RS12430 SM00840 ACU11_RS12430 ACU11_RS12460 SM01234 ACU11_RS12460 ACU11_RS12510 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACU11_RS12520 SM00382 ATPases associated with a variety of cellular activities ACU11_RS12560 SM00382 ATPases associated with a variety of cellular activities ACU11_RS12570 SM01103 ACU11_RS12570 ACU11_RS12580 SM00257 Lysin motif ACU11_RS12600 SM00463 Small MutS-related domain ACU11_RS12625 SM01192 ACU11_RS12625 ACU11_RS12625 SM01193 ACU11_RS12625 ACU11_RS12650 SM00387 Histidine kinase-like ATPases ACU11_RS12650 SM00433 TopoisomeraseII ACU11_RS12675 SM01091 Transporter associated domain ACU11_RS12700 SM00382 ATPases associated with a variety of cellular activities ACU11_RS12710 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS12885 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS12885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS12990 SM00830 Chorismate mutase type II ACU11_RS13010 SM00240 Forkhead associated domain ACU11_RS13030 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_RS13030 SM00866 ACU11_RS13030 ACU11_RS13090 SM00487 DEAD-like helicases superfamily ACU11_RS13090 SM00490 helicase superfamily c-terminal domain ACU11_RS13285 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS13425 SM01001 AIR carboxylase ACU11_RS13445 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS13445 SM00322 K homology RNA-binding domain ACU11_RS13450 SM01387 ACU11_RS13450 ACU11_RS13470 SM00316 Ribosomal protein S1-like RNA-binding domain ACU11_RS13470 SM00322 K homology RNA-binding domain ACU11_RS13520 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACU11_RS13525 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ACU11_RS13570 SM00822 ACU11_RS13570 ACU11_RS13585 SM00052 Putative diguanylate phosphodiesterase ACU11_RS13585 SM00267 diguanylate cyclase ACU11_RS13585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACU11_RS13650 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACU11_RS13680 SM00257 Lysin motif ACU11_RS13725 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS13770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS13770 SM00267 diguanylate cyclase ACU11_RS13780 SM00267 diguanylate cyclase ACU11_RS13875 SM00357 Cold shock protein domain ACU11_RS13905 SM00382 ATPases associated with a variety of cellular activities ACU11_RS13955 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS13985 SM00631 ACU11_RS13985 ACU11_RS13990 SM01217 ACU11_RS13990 ACU11_RS14025 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS14030 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS14035 SM00434 DNA Topoisomerase IV ACU11_RS14060 SM00710 Parallel beta-helix repeats ACU11_RS14060 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ACU11_RS14065 SM01172 ACU11_RS14065 ACU11_RS14095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_RS14105 SM00972 Spore Coat Protein U domain ACU11_RS14120 SM00972 Spore Coat Protein U domain ACU11_RS14145 SM00267 diguanylate cyclase ACU11_RS14175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS14215 SM00481 DNA polymerase alpha chain like domain ACU11_RS14520 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACU11_RS14525 SM00869 Autotransporter beta-domain ACU11_RS14575 SM00487 DEAD-like helicases superfamily ACU11_RS14575 SM00490 helicase superfamily c-terminal domain ACU11_RS14590 SM00357 Cold shock protein domain ACU11_RS14625 SM01118 ACU11_RS14625 ACU11_RS14635 SM00448 cheY-homologous receiver domain ACU11_RS14650 SM00358 Double-stranded RNA binding motif ACU11_RS14650 SM00535 Ribonuclease III family ACU11_RS14665 SM00838 Elongation factor G C-terminus ACU11_RS14670 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS14720 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS14745 SM00812 Alpha-L-fucosidase ACU11_RS14760 SM00387 Histidine kinase-like ATPases ACU11_RS14760 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS14760 SM00448 cheY-homologous receiver domain ACU11_RS14765 SM00387 Histidine kinase-like ATPases ACU11_RS14765 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS14765 SM00448 cheY-homologous receiver domain ACU11_RS14770 SM00387 Histidine kinase-like ATPases ACU11_RS14770 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS14770 SM00448 cheY-homologous receiver domain ACU11_RS14775 SM00387 Histidine kinase-like ATPases ACU11_RS14775 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS14775 SM00448 cheY-homologous receiver domain ACU11_RS14780 SM00867 YceI-like domain ACU11_RS14790 SM00867 YceI-like domain ACU11_RS14795 SM00357 Cold shock protein domain ACU11_RS14850 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_RS14930 SM00244 prohibitin homologues ACU11_RS14975 SM00812 Alpha-L-fucosidase ACU11_RS14980 SM00636 ACU11_RS14980 ACU11_RS14995 SM00758 ACU11_RS14995 ACU11_RS14995 SM01217 ACU11_RS14995 ACU11_RS15000 SM00382 ATPases associated with a variety of cellular activities ACU11_RS15015 SM01149 ACU11_RS15015 ACU11_RS15055 SM00369 Leucine-rich repeats, typical (most populated) subfamily ACU11_RS15080 SM01126 ACU11_RS15080 ACU11_RS15135 SM01126 ACU11_RS15135 ACU11_RS15145 SM00260 Two component signalling adaptor domain ACU11_RS15155 SM00073 Histidine Phosphotransfer domain ACU11_RS15155 SM00260 Two component signalling adaptor domain ACU11_RS15155 SM00387 Histidine kinase-like ATPases ACU11_RS15155 SM00448 cheY-homologous receiver domain ACU11_RS15155 SM01231 ACU11_RS15155 ACU11_RS15160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS15165 SM00260 Two component signalling adaptor domain ACU11_RS15170 SM00448 cheY-homologous receiver domain ACU11_RS15175 SM00448 cheY-homologous receiver domain ACU11_RS15200 SM00491 ACU11_RS15200 ACU11_RS15225 SM00954 Region found in RelA / SpoT proteins ACU11_RS15280 SM00382 ATPases associated with a variety of cellular activities ACU11_RS15280 SM00487 DEAD-like helicases superfamily ACU11_RS15280 SM00490 helicase superfamily c-terminal domain ACU11_RS15280 SM00847 Helicase associated domain (HA2) Add an annotation ACU11_RS15290 SM00341 Helicase and RNase D C-terminal ACU11_RS15290 SM00487 DEAD-like helicases superfamily ACU11_RS15290 SM00490 helicase superfamily c-terminal domain ACU11_RS15290 SM00956 ACU11_RS15290 ACU11_RS15300 SM00448 cheY-homologous receiver domain ACU11_RS15315 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS15325 SM00448 cheY-homologous receiver domain ACU11_RS15330 SM00091 PAS domain ACU11_RS15330 SM00911 HWE histidine kinase ACU11_RS15420 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS15655 SM00382 ATPases associated with a variety of cellular activities ACU11_RS15665 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACU11_RS15700 SM00834 Putative regulatory protein ACU11_RS15740 SM00382 ATPases associated with a variety of cellular activities ACU11_RS15870 SM00382 ATPases associated with a variety of cellular activities ACU11_RS15870 SM01086 C-terminal, D2-small domain, of ClpB protein ACU11_RS15885 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACU11_RS15885 SM00534 ATPase domain of DNA mismatch repair MUTS family ACU11_RS15900 SM00363 S4 RNA-binding domain ACU11_RS15955 SM00382 ATPases associated with a variety of cellular activities ACU11_RS15955 SM00962 SRP54-type protein, GTPase domain ACU11_RS15955 SM00963 SRP54-type protein, helical bundle domain ACU11_RS15975 SM00813 Alpha-L-arabinofuranosidase C-terminus ACU11_RS15990 SM00387 Histidine kinase-like ATPases ACU11_RS15990 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS15990 SM00448 cheY-homologous receiver domain ACU11_RS15995 SM00387 Histidine kinase-like ATPases ACU11_RS15995 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS16030 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS16035 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS16045 SM01126 ACU11_RS16045 ACU11_RS16050 SM00382 ATPases associated with a variety of cellular activities ACU11_RS16090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS16135 SM00904 Riboflavin kinase ACU11_RS16270 SM00564 beta-propeller repeat ACU11_RS16275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ACU11_RS16315 SM00881 CoA binding domain ACU11_RS16325 SM00387 Histidine kinase-like ATPases ACU11_RS16325 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS16330 SM00382 ATPases associated with a variety of cellular activities ACU11_RS16330 SM00448 cheY-homologous receiver domain ACU11_RS16410 SM00387 Histidine kinase-like ATPases ACU11_RS16410 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS16415 SM00448 cheY-homologous receiver domain ACU11_RS16415 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS16430 SM00642 Alpha-amylase domain ACU11_RS16435 SM01126 ACU11_RS16435 ACU11_RS16445 SM00528 Domain in histone-like proteins of HNS family ACU11_RS16500 SM00869 Autotransporter beta-domain ACU11_RS16565 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACU11_RS16640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS16640 SM00387 Histidine kinase-like ATPases ACU11_RS16670 SM00506 Appr-1"-p processing enzyme ACU11_RS16700 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACU11_RS16715 SM00849 Metallo-beta-lactamase superfamily ACU11_RS16730 SM00382 ATPases associated with a variety of cellular activities ACU11_RS16825 SM00861 Transketolase, pyrimidine binding domain ACU11_RS16860 SM00028 Tetratricopeptide repeats ACU11_RS16860 SM00327 von Willebrand factor (vWF) type A domain ACU11_RS16865 SM00327 von Willebrand factor (vWF) type A domain ACU11_RS16880 SM00382 ATPases associated with a variety of cellular activities ACU11_RS16885 SM00965 Secretin and TonB N terminus short domain ACU11_RS16935 SM00487 DEAD-like helicases superfamily ACU11_RS16935 SM00490 helicase superfamily c-terminal domain ACU11_RS16945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_RS16945 SM00954 Region found in RelA / SpoT proteins ACU11_RS16950 SM01409 ACU11_RS16950 ACU11_RS16955 SM00072 Guanylate kinase homologues. ACU11_RS16980 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS17005 SM01011 Aminopeptidase P, N-terminal domain ACU11_RS17170 SM00464 Found in ATP-dependent protease La (LON) ACU11_RS17235 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS17240 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS17270 SM00917 LeuA allosteric (dimerisation) domain ACU11_RS17275 SM01329 ACU11_RS17275 ACU11_RS17300 SM00267 diguanylate cyclase ACU11_RS17355 SM00919 Malic enzyme, NAD binding domain ACU11_RS17355 SM01274 ACU11_RS17355 ACU11_RS17370 SM00387 Histidine kinase-like ATPases ACU11_RS17370 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS17370 SM00448 cheY-homologous receiver domain ACU11_RS17410 SM00421 helix_turn_helix, Lux Regulon ACU11_RS17410 SM00448 cheY-homologous receiver domain ACU11_RS17420 SM00387 Histidine kinase-like ATPases ACU11_RS17420 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS17425 SM00448 cheY-homologous receiver domain ACU11_RS17425 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS17440 SM00822 ACU11_RS17440 ACU11_RS17445 SM00354 helix_turn _helix lactose operon repressor ACU11_RS17465 SM00642 Alpha-amylase domain ACU11_RS17475 SM01154 ACU11_RS17475 ACU11_RS17505 SM00450 Rhodanese Homology Domain ACU11_RS17515 SM00506 Appr-1"-p processing enzyme ACU11_RS17565 SM01126 ACU11_RS17565 ACU11_RS17620 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACU11_RS17620 SM00866 ACU11_RS17620 ACU11_RS17685 SM00382 ATPases associated with a variety of cellular activities ACU11_RS17700 SM01211 ACU11_RS17700 ACU11_RS17760 SM00656 ACU11_RS17760 ACU11_RS17790 SM00528 Domain in histone-like proteins of HNS family ACU11_RS17805 SM00382 ATPases associated with a variety of cellular activities ACU11_RS17835 SM00882 Coenzyme A transferase ACU11_RS17840 SM00882 Coenzyme A transferase ACU11_RS17875 SM00893 Electron transfer flavoprotein domain ACU11_RS17880 SM00893 Electron transfer flavoprotein domain ACU11_RS17980 SM00382 ATPases associated with a variety of cellular activities ACU11_RS17995 SM00116 Domain in cystathionine beta-synthase and other proteins. ACU11_RS18030 SM00487 DEAD-like helicases superfamily ACU11_RS18030 SM00490 helicase superfamily c-terminal domain ACU11_RS18050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS18075 SM00825 Beta-ketoacyl synthase ACU11_RS18140 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18165 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18165 SM00448 cheY-homologous receiver domain ACU11_RS18170 SM00387 Histidine kinase-like ATPases ACU11_RS18185 SM00830 Chorismate mutase type II ACU11_RS18195 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18265 SM00986 Uracil DNA glycosylase superfamily ACU11_RS18265 SM00987 UreE urease accessory protein, C-terminal domain ACU11_RS18295 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18295 SM00930 ACU11_RS18295 ACU11_RS18370 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ACU11_RS18370 SM00091 PAS domain ACU11_RS18370 SM00387 Histidine kinase-like ATPases ACU11_RS18370 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS18370 SM00448 cheY-homologous receiver domain ACU11_RS18390 SM01005 Alanine racemase, C-terminal domain ACU11_RS18400 SM00344 helix_turn_helix ASNC type ACU11_RS18440 SM00448 cheY-homologous receiver domain ACU11_RS18440 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS18445 SM00387 Histidine kinase-like ATPases ACU11_RS18445 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS18475 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18485 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. ACU11_RS18490 SM00986 Uracil DNA glycosylase superfamily ACU11_RS18490 SM00987 UreE urease accessory protein, C-terminal domain ACU11_RS18560 SM00448 cheY-homologous receiver domain ACU11_RS18560 SM00850 LytTr DNA-binding domain ACU11_RS18565 SM00387 Histidine kinase-like ATPases ACU11_RS18580 SM00138 Methyltransferase, chemotaxis proteins ACU11_RS18585 SM00448 cheY-homologous receiver domain ACU11_RS18595 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18595 SM00448 cheY-homologous receiver domain ACU11_RS18680 SM00382 ATPases associated with a variety of cellular activities ACU11_RS18760 SM00867 YceI-like domain ACU11_RS18900 SM00912 haemagglutination activity domain ACU11_RS19050 SM00382 ATPases associated with a variety of cellular activities ACU11_RS19075 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS19085 SM00382 ATPases associated with a variety of cellular activities ACU11_RS19105 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ACU11_RS19225 SM00257 Lysin motif ACU11_RS19250 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACU11_RS19250 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACU11_RS19250 SM00493 ACU11_RS19250 ACU11_RS19305 SM00487 DEAD-like helicases superfamily ACU11_RS19305 SM00490 helicase superfamily c-terminal domain ACU11_RS19340 SM00878 Biotin carboxylase C-terminal domain ACU11_RS19365 SM00530 Helix-turn-helix XRE-family like proteins ACU11_RS19395 SM00798 AICARFT/IMPCHase bienzyme ACU11_RS19395 SM00851 MGS-like domain ACU11_RS19400 SM01209 ACU11_RS19400 ACU11_RS19400 SM01210 ACU11_RS19400 ACU11_RS19430 SM00563 Phosphate acyltransferases ACU11_RS19480 SM00052 Putative diguanylate phosphodiesterase ACU11_RS19480 SM00267 diguanylate cyclase ACU11_RS19480 SM00448 cheY-homologous receiver domain ACU11_RS19485 SM00073 Histidine Phosphotransfer domain ACU11_RS19485 SM00387 Histidine kinase-like ATPases ACU11_RS19485 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS19485 SM00448 cheY-homologous receiver domain ACU11_RS19540 SM00100 Cyclic nucleotide-monophosphate binding domain ACU11_RS19540 SM00419 helix_turn_helix, cAMP Regulatory protein ACU11_RS19560 SM00903 Flavin reductase like domain ACU11_RS19590 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACU11_RS19605 SM00271 DnaJ molecular chaperone homology domain ACU11_RS19635 SM00470 ParB-like nuclease domain ACU11_RS19655 SM01259 ACU11_RS19655 ACU11_RS19685 SM00836 DALR anticodon binding domain ACU11_RS19685 SM01016 Arginyl tRNA synthetase N terminal dom ACU11_RS19800 SM00938 Nitrogen regulatory protein P-II ACU11_RS19810 SM00382 ATPases associated with a variety of cellular activities ACU11_RS19820 SM00052 Putative diguanylate phosphodiesterase ACU11_RS19880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACU11_RS19925 SM01060 ACU11_RS19925 ACU11_RS19965 SM00849 Metallo-beta-lactamase superfamily ACU11_RS20060 SM00387 Histidine kinase-like ATPases ACU11_RS20060 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS20065 SM00448 cheY-homologous receiver domain ACU11_RS20065 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS20085 SM00248 ankyrin repeats ACU11_RS20090 SM01060 ACU11_RS20090 ACU11_RS20110 SM00491 ACU11_RS20110 ACU11_RS20140 SM00477 DNA/RNA non-specific endonuclease ACU11_RS20140 SM00892 DNA/RNA non-specific endonuclease ACU11_RS20155 SM01004 Delta-aminolevulinic acid dehydratase ACU11_RS20225 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS20230 SM00387 Histidine kinase-like ATPases ACU11_RS20235 SM00448 cheY-homologous receiver domain ACU11_RS20235 SM00862 Transcriptional regulatory protein, C terminal ACU11_RS20310 SM01126 ACU11_RS20310 ACU11_RS20435 SM00642 Alpha-amylase domain ACU11_RS20445 SM00642 Alpha-amylase domain ACU11_RS20455 SM00642 Alpha-amylase domain ACU11_RS20460 SM00642 Alpha-amylase domain ACU11_RS20470 SM00267 diguanylate cyclase ACU11_RS20540 SM00382 ATPases associated with a variety of cellular activities ACU11_RS20655 SM00369 Leucine-rich repeats, typical (most populated) subfamily ACU11_RS20680 SM00758 ACU11_RS20680 ACU11_RS20680 SM01217 ACU11_RS20680 ACU11_RS20690 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ACU11_RS20705 SM00354 helix_turn _helix lactose operon repressor ACU11_RS20780 SM00382 ATPases associated with a variety of cellular activities ACU11_RS20790 SM00836 DALR anticodon binding domain ACU11_RS20860 SM00729 Elongator protein 3, MiaB family, Radical SAM ACU11_RS20860 SM00876 Biotin and Thiamin Synthesis associated domain ACU11_RS20915 SM01228 ACU11_RS20915 ACU11_RS20925 SM01126 ACU11_RS20925 ACU11_RS20985 SM00090 RIO-like kinase ACU11_RS20990 SM00346 helix_turn_helix isocitrate lyase regulation ACU11_RS21010 SM00998 Adenylosuccinate lyase C-terminus ACU11_RS21030 SM00882 Coenzyme A transferase ACU11_RS21035 SM00882 Coenzyme A transferase ACU11_RS21070 SM00342 helix_turn_helix, arabinose operon control protein ACU11_RS21090 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS21095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACU11_RS21125 SM01126 ACU11_RS21125 ACU11_RS21170 SM00633 Glycosyl hydrolase family 10 ACU11_RS21175 SM00633 Glycosyl hydrolase family 10 ACU11_RS21210 SM00878 Biotin carboxylase C-terminal domain ACU11_RS21265 SM00833 Cobalamin synthesis protein cobW C-terminal domain ACU11_RS21295 SM00347 helix_turn_helix multiple antibiotic resistance protein ACU11_RS21340 SM00829 Enoylreductase ACU11_RS21365 SM00487 DEAD-like helicases superfamily ACU11_RS21365 SM00490 helicase superfamily c-terminal domain ACU11_RS21365 SM00847 Helicase associated domain (HA2) Add an annotation ACU11_RS21420 SM01126 ACU11_RS21420 ACU11_RS21435 SM00829 Enoylreductase ACU11_RS21440 SM00563 Phosphate acyltransferases ACU11_RS21450 SM00354 helix_turn _helix lactose operon repressor ACU11_RS21470 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACU11_RS21500 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS21500 SM00388 His Kinase A (phosphoacceptor) domain ACU11_RS21565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACU11_RS21565 SM00091 PAS domain ACU11_RS21565 SM00267 diguanylate cyclase ACU11_RS21620 SM00014 Acid phosphatase homologues ACU11_RS21630 SM00028 Tetratricopeptide repeats