locus-tag class description H4J00_RS00005 PF00308 Bacterial dnaA protein H4J00_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix H4J00_RS00005 PF11638 DnaA N-terminal domain H4J00_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain H4J00_RS00010 PF02767 DNA polymerase III beta subunit, central domain H4J00_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain H4J00_RS00015 PF02463 RecF/RecN/SMC N terminal domain H4J00_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS00020 PF18053 DNA gyrase B subunit insert domain H4J00_RS00020 PF01751 Toprim domain H4J00_RS00020 PF00204 DNA gyrase B H4J00_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus H4J00_RS00030 PF01435 Peptidase family M48 H4J00_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal H4J00_RS00045 PF01618 MotA/TolQ/ExbB proton channel family H4J00_RS00050 PF02472 Biopolymer transport protein ExbD/TolR H4J00_RS00055 PF02472 Biopolymer transport protein ExbD/TolR H4J00_RS00060 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H4J00_RS00070 PF13091 PLD-like domain H4J00_RS00070 PF13396 Phospholipase_D-nuclease N-terminal H4J00_RS00085 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS00085 PF00107 Zinc-binding dehydrogenase H4J00_RS00090 PF00150 Cellulase (glycosyl hydrolase family 5) H4J00_RS00100 PF00150 Cellulase (glycosyl hydrolase family 5) H4J00_RS00115 PF00150 Cellulase (glycosyl hydrolase family 5) H4J00_RS00125 PF04389 Peptidase family M28 H4J00_RS00135 PF01551 Peptidase family M23 H4J00_RS00140 PF13180 PDZ domain H4J00_RS00140 PF03572 Peptidase family S41 H4J00_RS00145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4J00_RS00145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4J00_RS00160 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H4J00_RS00170 PF04055 Radical SAM superfamily H4J00_RS00185 PF06827 Zinc finger found in FPG and IleRS H4J00_RS00185 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H4J00_RS00185 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H4J00_RS00205 PF04349 Periplasmic glucan biosynthesis protein, MdoG H4J00_RS00215 PF00265 Thymidine kinase H4J00_RS00220 PF00580 UvrD/REP helicase N-terminal domain H4J00_RS00220 PF13361 UvrD-like helicase C-terminal domain H4J00_RS00240 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) H4J00_RS00245 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H4J00_RS00250 PF04820 Tryptophan halogenase H4J00_RS00265 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS00275 PF01553 Acyltransferase H4J00_RS00280 PF02801 Beta-ketoacyl synthase, C-terminal domain H4J00_RS00280 PF14765 Polyketide synthase dehydratase H4J00_RS00280 PF08659 KR domain H4J00_RS00280 PF00109 Beta-ketoacyl synthase, N-terminal domain H4J00_RS00280 PF00550 Phosphopantetheine attachment site H4J00_RS00280 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS00280 PF00698 Acyl transferase domain H4J00_RS00280 PF16197 Ketoacyl-synthetase C-terminal extension H4J00_RS00315 PF04616 Glycosyl hydrolases family 43 H4J00_RS00340 PF00331 Glycosyl hydrolase family 10 H4J00_RS00340 PF03422 Carbohydrate binding module (family 6) H4J00_RS00340 PF00553 Cellulose binding domain H4J00_RS00345 PF02614 Glucuronate isomerase H4J00_RS00370 PF00326 Prolyl oligopeptidase family H4J00_RS00375 PF02785 Biotin carboxylase C-terminal domain H4J00_RS00375 PF00289 Biotin carboxylase, N-terminal domain H4J00_RS00375 PF00364 Biotin-requiring enzyme H4J00_RS00375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4J00_RS00375 PF18140 Propionyl-coenzyme A carboxylase BT domain H4J00_RS00380 PF01039 Carboxyl transferase domain H4J00_RS00385 PF02770 Acyl-CoA dehydrogenase, middle domain H4J00_RS00385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4J00_RS00385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4J00_RS00440 PF07683 Cobalamin synthesis protein cobW C-terminal domain H4J00_RS00440 PF02492 CobW/HypB/UreG, nucleotide-binding domain H4J00_RS00465 PF03969 AFG1-like ATPase H4J00_RS00470 PF01047 MarR family H4J00_RS00475 PF02566 OsmC-like protein H4J00_RS00505 PF00248 Aldo/keto reductase family H4J00_RS00510 PF00107 Zinc-binding dehydrogenase H4J00_RS00510 PF16884 N-terminal domain of oxidoreductase H4J00_RS00515 PF00248 Aldo/keto reductase family H4J00_RS00525 PF00849 RNA pseudouridylate synthase H4J00_RS00535 PF08482 ATP-dependent helicase C-terminal H4J00_RS00535 PF04408 Helicase associated domain (HA2) H4J00_RS00535 PF00270 DEAD/DEAH box helicase H4J00_RS00535 PF00271 Helicase conserved C-terminal domain H4J00_RS00545 PF07308 Protein of unknown function (DUF1456) H4J00_RS00550 PF00576 HIUase/Transthyretin family H4J00_RS00575 PF00266 Aminotransferase class-V H4J00_RS00580 PF07687 Peptidase dimerisation domain H4J00_RS00580 PF01546 Peptidase family M20/M25/M40 H4J00_RS00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS00585 PF03466 LysR substrate binding domain H4J00_RS00600 PF00920 Dehydratase family H4J00_RS00605 PF03692 Putative zinc- or iron-chelating domain H4J00_RS00610 PF00132 Bacterial transferase hexapeptide (six repeats) H4J00_RS00615 PF07690 Major Facilitator Superfamily H4J00_RS00620 PF11871 Domain of unknown function (DUF3391) H4J00_RS00620 PF01966 HD domain H4J00_RS00640 PF00171 Aldehyde dehydrogenase family H4J00_RS00650 PF01494 FAD binding domain H4J00_RS00670 PF00111 2Fe-2S iron-sulfur cluster binding domain H4J00_RS00670 PF00970 Oxidoreductase FAD-binding domain H4J00_RS00675 PF00355 Rieske [2Fe-2S] domain H4J00_RS00680 PF01144 Coenzyme A transferase H4J00_RS00685 PF01144 Coenzyme A transferase H4J00_RS00690 PF02803 Thiolase, C-terminal domain H4J00_RS00690 PF00108 Thiolase, N-terminal domain H4J00_RS00695 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal H4J00_RS00695 PF00775 Dioxygenase H4J00_RS00710 PF10397 Adenylosuccinate lyase C-terminus H4J00_RS00710 PF00206 Lyase H4J00_RS00715 PF12146 Serine aminopeptidase, S33 H4J00_RS00720 PF02627 Carboxymuconolactone decarboxylase family H4J00_RS00735 PF01614 Bacterial transcriptional regulator H4J00_RS00735 PF09339 IclR helix-turn-helix domain H4J00_RS00745 PF07859 alpha/beta hydrolase fold H4J00_RS00775 PF03377 TAL effector repeat H4J00_RS00800 PF13932 GidA associated domain H4J00_RS00800 PF01134 Glucose inhibited division protein A H4J00_RS00815 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS00835 PF13649 Methyltransferase domain H4J00_RS00845 PF12697 Alpha/beta hydrolase family H4J00_RS00855 PF00155 Aminotransferase class I and II H4J00_RS00860 PF04055 Radical SAM superfamily H4J00_RS00860 PF06968 Biotin and Thiamin Synthesis associated domain H4J00_RS00865 PF00156 Phosphoribosyl transferase domain H4J00_RS00870 PF01040 UbiA prenyltransferase family H4J00_RS00895 PF04357 TamB, inner membrane protein subunit of TAM complex H4J00_RS00900 PF01103 Surface antigen H4J00_RS00900 PF17243 POTRA domain TamA domain 1 H4J00_RS00905 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS00905 PF00593 TonB dependent receptor H4J00_RS00915 PF13181 Tetratricopeptide repeat H4J00_RS00920 PF05746 DALR anticodon binding domain H4J00_RS00920 PF02092 Glycyl-tRNA synthetase beta subunit H4J00_RS00925 PF02091 Glycyl-tRNA synthetase alpha subunit H4J00_RS00930 PF00437 Type II/IV secretion system protein H4J00_RS00930 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H4J00_RS00940 PF00958 GMP synthase C terminal domain H4J00_RS00940 PF00117 Glutamine amidotransferase class-I H4J00_RS00950 PF00902 Sec-independent protein translocase protein (TatC) H4J00_RS00955 PF02416 mttA/Hcf106 family H4J00_RS00960 PF02416 mttA/Hcf106 family H4J00_RS00970 PF00762 Ferrochelatase H4J00_RS00975 PF12697 Alpha/beta hydrolase family H4J00_RS00995 PF04381 Putative exonuclease, RdgC H4J00_RS01000 PF01171 PP-loop family H4J00_RS01010 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS01020 PF07477 Glycosyl hydrolase family 67 C-terminus H4J00_RS01020 PF07488 Glycosyl hydrolase family 67 middle domain H4J00_RS01020 PF03648 Glycosyl hydrolase family 67 N-terminus H4J00_RS01030 PF13378 Enolase C-terminal domain-like H4J00_RS01030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4J00_RS01035 PF04616 Glycosyl hydrolases family 43 H4J00_RS01035 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain H4J00_RS01040 PF00933 Glycosyl hydrolase family 3 N terminal domain H4J00_RS01040 PF01915 Glycosyl hydrolase family 3 C-terminal domain H4J00_RS01040 PF07691 PA14 domain H4J00_RS01040 PF14310 Fibronectin type III-like domain H4J00_RS01045 PF08125 Mannitol dehydrogenase C-terminal domain H4J00_RS01045 PF01232 Mannitol dehydrogenase Rossmann domain H4J00_RS01060 PF05819 NolX protein H4J00_RS01110 PF01313 Bacterial export proteins, family 3 H4J00_RS01115 PF00813 FliP family H4J00_RS01130 PF00771 FHIPEP family H4J00_RS01135 PF01312 FlhB HrpN YscU SpaS Family H4J00_RS01150 PF01514 Secretory protein of YscJ/FliF family H4J00_RS01165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4J00_RS01165 PF18269 T3SS EscN ATPase C-terminal domain H4J00_RS01165 PF02874 ATP synthase alpha/beta family, beta-barrel domain H4J00_RS01175 PF01311 Bacterial export proteins, family 1 H4J00_RS01180 PF00263 Bacterial type II and III secretion system protein H4J00_RS01180 PF03958 Bacterial type II/III secretion system short domain H4J00_RS01190 PF01464 Transglycosylase SLT domain H4J00_RS01210 PF12794 Mechanosensitive ion channel inner membrane domain 1 H4J00_RS01210 PF12795 Mechanosensitive ion channel porin domain H4J00_RS01210 PF00924 Mechanosensitive ion channel H4J00_RS01225 PF03109 ABC1 family H4J00_RS01230 PF05661 Protein of unknown function (DUF808) H4J00_RS01235 PF02638 Glycosyl hydrolase-like 10 H4J00_RS01240 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS01245 PF08323 Starch synthase catalytic domain H4J00_RS01245 PF00534 Glycosyl transferases group 1 H4J00_RS01250 PF00128 Alpha amylase, catalytic domain H4J00_RS01250 PF02806 Alpha amylase, C-terminal all-beta domain H4J00_RS01250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4J00_RS01255 PF11941 Domain of unknown function (DUF3459) H4J00_RS01255 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4J00_RS01255 PF00128 Alpha amylase, catalytic domain H4J00_RS01260 PF02446 4-alpha-glucanotransferase H4J00_RS01265 PF00128 Alpha amylase, catalytic domain H4J00_RS01275 PF00128 Alpha amylase, catalytic domain H4J00_RS01275 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4J00_RS01280 PF13460 NAD(P)H-binding H4J00_RS01290 PF01609 Transposase DDE domain H4J00_RS01290 PF05598 Transposase domain (DUF772) H4J00_RS01295 PF13936 Helix-turn-helix domain H4J00_RS01295 PF00665 Integrase core domain H4J00_RS01310 PF01609 Transposase DDE domain H4J00_RS01310 PF05598 Transposase domain (DUF772) H4J00_RS01325 PF05598 Transposase domain (DUF772) H4J00_RS01325 PF01609 Transposase DDE domain H4J00_RS01345 PF03377 TAL effector repeat H4J00_RS01360 PF01471 Putative peptidoglycan binding domain H4J00_RS01360 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS01365 PF03377 TAL effector repeat H4J00_RS01385 PF03377 TAL effector repeat H4J00_RS01440 PF01026 TatD related DNase H4J00_RS01460 PF07690 Major Facilitator Superfamily H4J00_RS01470 PF02146 Sir2 family H4J00_RS01475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4J00_RS01480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H4J00_RS01480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H4J00_RS01500 PF00551 Formyl transferase H4J00_RS01505 PF00072 Response regulator receiver domain H4J00_RS01505 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS01525 PF02677 Epoxyqueuosine reductase QueH H4J00_RS01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS01530 PF03466 LysR substrate binding domain H4J00_RS01535 PF03358 NADPH-dependent FMN reductase H4J00_RS01545 PF01717 Cobalamin-independent synthase, Catalytic domain H4J00_RS01545 PF08267 Cobalamin-independent synthase, N-terminal domain H4J00_RS01555 PF01638 HxlR-like helix-turn-helix H4J00_RS01560 PF05368 NmrA-like family H4J00_RS01585 PF00490 Delta-aminolevulinic acid dehydratase H4J00_RS01600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS01600 PF03466 LysR substrate binding domain H4J00_RS01610 PF00175 Oxidoreductase NAD-binding domain H4J00_RS01610 PF00667 FAD binding domain H4J00_RS01610 PF00258 Flavodoxin H4J00_RS01625 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H4J00_RS01625 PF01488 Shikimate / quinate 5-dehydrogenase H4J00_RS01625 PF08501 Shikimate dehydrogenase substrate binding domain H4J00_RS01640 PF06733 DEAD_2 H4J00_RS01640 PF13307 Helicase C-terminal domain H4J00_RS01650 PF00199 Catalase H4J00_RS01650 PF06628 Catalase-related immune-responsive H4J00_RS01665 PF01207 Dihydrouridine synthase (Dus) H4J00_RS01675 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS01675 PF00072 Response regulator receiver domain H4J00_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS01695 PF06167 Glucose-regulated metallo-peptidase M90 H4J00_RS01705 PF08279 HTH domain H4J00_RS01705 PF03099 Biotin/lipoate A/B protein ligase family H4J00_RS01705 PF02237 Biotin protein ligase C terminal domain H4J00_RS01710 PF03309 Type III pantothenate kinase H4J00_RS01725 PF02223 Thymidylate kinase H4J00_RS01745 PF00491 Arginase family H4J00_RS01765 PF00579 tRNA synthetases class I (W and Y) H4J00_RS01770 PF00753 Metallo-beta-lactamase superfamily H4J00_RS01795 PF00892 EamA-like transporter family H4J00_RS01815 PF00199 Catalase H4J00_RS01830 PF00883 Cytosol aminopeptidase family, catalytic domain H4J00_RS01830 PF02789 Cytosol aminopeptidase family, N-terminal domain H4J00_RS01840 PF01594 AI-2E family transporter H4J00_RS01865 PF00595 PDZ domain H4J00_RS01885 PF08338 Domain of unknown function (DUF1731) H4J00_RS01885 PF01370 NAD dependent epimerase/dehydratase family H4J00_RS01915 PF00665 Integrase core domain H4J00_RS01915 PF13936 Helix-turn-helix domain H4J00_RS01920 PF00440 Bacterial regulatory proteins, tetR family H4J00_RS01925 PF00970 Oxidoreductase FAD-binding domain H4J00_RS01925 PF00111 2Fe-2S iron-sulfur cluster binding domain H4J00_RS01925 PF00175 Oxidoreductase NAD-binding domain H4J00_RS01930 PF00487 Fatty acid desaturase H4J00_RS01935 PF00563 EAL domain H4J00_RS01935 PF12792 CSS motif domain associated with EAL H4J00_RS01955 PF01078 Magnesium chelatase, subunit ChlI H4J00_RS01955 PF13335 Magnesium chelatase, subunit ChlI C-terminal H4J00_RS01960 PF04380 Membrane fusogenic activity H4J00_RS01965 PF00543 Nitrogen regulatory protein P-II H4J00_RS02005 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS02010 PF03377 TAL effector repeat H4J00_RS02015 PF03377 TAL effector repeat H4J00_RS02040 PF17284 Spermidine synthase tetramerisation domain H4J00_RS02045 PF17810 Arginine decarboxylase helical bundle domain H4J00_RS02045 PF17944 Arginine decarboxylase C-terminal helical extension H4J00_RS02045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H4J00_RS02065 PF01757 Acyltransferase family H4J00_RS02070 PF00106 short chain dehydrogenase H4J00_RS02085 PF05746 DALR anticodon binding domain H4J00_RS02085 PF03485 Arginyl tRNA synthetase N terminal domain H4J00_RS02085 PF00750 tRNA synthetases class I (R) H4J00_RS02090 PF04002 RadC-like JAB domain H4J00_RS02095 PF04127 DNA / pantothenate metabolism flavoprotein H4J00_RS02095 PF02441 Flavoprotein H4J00_RS02100 PF00692 dUTPase H4J00_RS02105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H4J00_RS02105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H4J00_RS02105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H4J00_RS02105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H4J00_RS02120 PF00535 Glycosyl transferase family 2 H4J00_RS02125 PF01370 NAD dependent epimerase/dehydratase family H4J00_RS02135 PF17762 HTH domain found in ParB protein H4J00_RS02135 PF02195 ParB-like nuclease domain H4J00_RS02140 PF13614 AAA domain H4J00_RS02150 PF00156 Phosphoribosyl transferase domain H4J00_RS02165 PF01259 SAICAR synthetase H4J00_RS02170 PF00226 DnaJ domain H4J00_RS02170 PF05099 Tellurite resistance protein TerB H4J00_RS02175 PF00834 Ribulose-phosphate 3 epimerase family H4J00_RS02180 PF00583 Acetyltransferase (GNAT) family H4J00_RS02185 PF00781 Diacylglycerol kinase catalytic domain H4J00_RS02190 PF04715 Anthranilate synthase component I, N terminal region H4J00_RS02190 PF00425 chorismate binding enzyme H4J00_RS02205 PF00117 Glutamine amidotransferase class-I H4J00_RS02215 PF02885 Glycosyl transferase family, helical bundle domain H4J00_RS02215 PF00591 Glycosyl transferase family, a/b domain H4J00_RS02220 PF00218 Indole-3-glycerol phosphate synthase H4J00_RS02230 PF00027 Cyclic nucleotide-binding domain H4J00_RS02230 PF00325 Bacterial regulatory proteins, crp family H4J00_RS02235 PF02675 S-adenosylmethionine decarboxylase H4J00_RS02240 PF00893 Small Multidrug Resistance protein H4J00_RS02245 PF03232 Ubiquinone biosynthesis protein COQ7 H4J00_RS02250 PF00572 Ribosomal protein L13 H4J00_RS02255 PF00380 Ribosomal protein S9/S16 H4J00_RS02270 PF00293 NUDIX domain H4J00_RS02280 PF00210 Ferritin-like domain H4J00_RS02285 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H4J00_RS02285 PF00072 Response regulator receiver domain H4J00_RS02285 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS02285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS02285 PF00672 HAMP domain H4J00_RS02285 PF01627 Hpt domain H4J00_RS02290 PF00563 EAL domain H4J00_RS02290 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS02290 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS02310 PF01521 Iron-sulphur cluster biosynthesis H4J00_RS02320 PF00293 NUDIX domain H4J00_RS02320 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain H4J00_RS02320 PF09297 NADH pyrophosphatase zinc ribbon domain H4J00_RS02325 PF17113 Regulatory signalling modulator protein AmpE H4J00_RS02325 PF03186 CobD/Cbib protein H4J00_RS02340 PF07690 Major Facilitator Superfamily H4J00_RS02355 PF12805 FUSC-like inner membrane protein yccS H4J00_RS02365 PF00005 ABC transporter H4J00_RS02365 PF02687 FtsX-like permease family H4J00_RS02365 PF12704 MacB-like periplasmic core domain H4J00_RS02370 PF02843 Phosphoribosylglycinamide synthetase, C domain H4J00_RS02370 PF02844 Phosphoribosylglycinamide synthetase, N domain H4J00_RS02370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H4J00_RS02375 PF01808 AICARFT/IMPCHase bienzyme H4J00_RS02375 PF02142 MGS-like domain H4J00_RS02390 PF00818 Ice nucleation protein repeat H4J00_RS02400 PF02954 Bacterial regulatory protein, Fis family H4J00_RS02410 PF01381 Helix-turn-helix H4J00_RS02440 PF02785 Biotin carboxylase C-terminal domain H4J00_RS02440 PF00289 Biotin carboxylase, N-terminal domain H4J00_RS02440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4J00_RS02450 PF00364 Biotin-requiring enzyme H4J00_RS02455 PF01220 Dehydroquinase class II H4J00_RS02465 PF02683 Cytochrome C biogenesis protein transmembrane region H4J00_RS02465 PF11412 Disulphide bond corrector protein DsbC H4J00_RS02470 PF03091 CutA1 divalent ion tolerance protein H4J00_RS02475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H4J00_RS02475 PF18074 Primosomal protein N C-terminal domain H4J00_RS02475 PF17764 3′ DNA-binding domain (3′BD) H4J00_RS02475 PF00271 Helicase conserved C-terminal domain H4J00_RS02475 PF00270 DEAD/DEAH box helicase H4J00_RS02495 PF01554 MatE H4J00_RS02500 PF01343 Peptidase family S49 H4J00_RS02525 PF01300 Telomere recombination H4J00_RS02530 PF01131 DNA topoisomerase H4J00_RS02530 PF01751 Toprim domain H4J00_RS02530 PF13368 Topoisomerase C-terminal repeat H4J00_RS02540 PF07963 Prokaryotic N-terminal methylation motif H4J00_RS02540 PF00114 Pilin (bacterial filament) H4J00_RS02545 PF04361 Protein of unknown function (DUF494) H4J00_RS02550 PF02481 DNA recombination-mediator protein A H4J00_RS02550 PF17782 DprA winged helix domain H4J00_RS02560 PF01327 Polypeptide deformylase H4J00_RS02565 PF02911 Formyl transferase, C-terminal domain H4J00_RS02565 PF00551 Formyl transferase H4J00_RS02570 PF01189 16S rRNA methyltransferase RsmB/F H4J00_RS02570 PF01029 NusB family H4J00_RS02585 PF00535 Glycosyl transferase family 2 H4J00_RS02605 PF00925 GTP cyclohydrolase II H4J00_RS02615 PF03279 Bacterial lipid A biosynthesis acyltransferase H4J00_RS02620 PF02580 D-Tyr-tRNA(Tyr) deacylase H4J00_RS02625 PF04545 Sigma-70, region 4 H4J00_RS02625 PF04539 Sigma-70 region 3 H4J00_RS02625 PF04546 Sigma-70, non-essential region H4J00_RS02625 PF00140 Sigma-70 factor, region 1.2 H4J00_RS02625 PF03979 Sigma-70 factor, region 1.1 H4J00_RS02625 PF04542 Sigma-70 region 2 H4J00_RS02660 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region H4J00_RS02660 PF00326 Prolyl oligopeptidase family H4J00_RS02665 PF00043 Glutathione S-transferase, C-terminal domain H4J00_RS02665 PF02798 Glutathione S-transferase, N-terminal domain H4J00_RS02700 PF00005 ABC transporter H4J00_RS02710 PF01381 Helix-turn-helix H4J00_RS02720 PF02583 Metal-sensitive transcriptional repressor H4J00_RS02730 PF01383 CpcD/allophycocyanin linker domain H4J00_RS02730 PF00175 Oxidoreductase NAD-binding domain H4J00_RS02735 PF00005 ABC transporter H4J00_RS02740 PF01061 ABC-2 type transporter H4J00_RS02750 PF02558 Ketopantoate reductase PanE/ApbA H4J00_RS02750 PF08546 Ketopantoate reductase PanE/ApbA C terminal H4J00_RS02770 PF05598 Transposase domain (DUF772) H4J00_RS02770 PF01609 Transposase DDE domain H4J00_RS02780 PF13406 Transglycosylase SLT domain H4J00_RS02800 PF00665 Integrase core domain H4J00_RS02800 PF13936 Helix-turn-helix domain H4J00_RS02815 PF05598 Transposase domain (DUF772) H4J00_RS02815 PF01609 Transposase DDE domain H4J00_RS02820 PF05860 haemagglutination activity domain H4J00_RS02820 PF04829 Pre-toxin domain with VENN motif H4J00_RS02820 PF13018 Extended Signal Peptide of Type V secretion system H4J00_RS02820 PF13332 Hemagglutinin repeat H4J00_RS02900 PF04264 YceI-like domain H4J00_RS02905 PF00881 Nitroreductase family H4J00_RS02930 PF02592 Putative vitamin uptake transporter H4J00_RS02935 PF03710 Glutamate-ammonia ligase adenylyltransferase H4J00_RS02935 PF08335 GlnD PII-uridylyltransferase H4J00_RS02965 PF03377 TAL effector repeat H4J00_RS02970 PF00005 ABC transporter H4J00_RS02985 PF00593 TonB dependent receptor H4J00_RS02985 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS02990 PF05598 Transposase domain (DUF772) H4J00_RS02990 PF01609 Transposase DDE domain H4J00_RS03035 PF00107 Zinc-binding dehydrogenase H4J00_RS03035 PF13823 Alcohol dehydrogenase GroES-associated H4J00_RS03035 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS03065 PF02322 Cytochrome bd terminal oxidase subunit II H4J00_RS03070 PF01654 Cytochrome bd terminal oxidase subunit I H4J00_RS03080 PF00158 Sigma-54 interaction domain H4J00_RS03080 PF00072 Response regulator receiver domain H4J00_RS03080 PF02954 Bacterial regulatory protein, Fis family H4J00_RS03105 PF06580 Histidine kinase H4J00_RS03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS03105 PF00672 HAMP domain H4J00_RS03105 PF02743 Cache domain H4J00_RS03110 PF00072 Response regulator receiver domain H4J00_RS03110 PF04397 LytTr DNA-binding domain H4J00_RS03120 PF13520 Amino acid permease H4J00_RS03140 PF05649 Peptidase family M13 H4J00_RS03140 PF01431 Peptidase family M13 H4J00_RS03150 PF00248 Aldo/keto reductase family H4J00_RS03165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H4J00_RS03175 PF03167 Uracil DNA glycosylase superfamily H4J00_RS03185 PF02469 Fasciclin domain H4J00_RS03190 PF00999 Sodium/hydrogen exchanger family H4J00_RS03195 PF00005 ABC transporter H4J00_RS03200 PF01061 ABC-2 type transporter H4J00_RS03215 PF00082 Subtilase family H4J00_RS03215 PF04151 Bacterial pre-peptidase C-terminal domain H4J00_RS03225 PF00072 Response regulator receiver domain H4J00_RS03225 PF13188 PAS domain H4J00_RS03225 PF08448 PAS fold H4J00_RS03225 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS03230 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS03230 PF00072 Response regulator receiver domain H4J00_RS03250 PF13677 Membrane MotB of proton-channel complex MotA/MotB H4J00_RS03250 PF00691 OmpA family H4J00_RS03255 PF01618 MotA/TolQ/ExbB proton channel family H4J00_RS03265 PF01641 SelR domain H4J00_RS03275 PF01037 Lrp/AsnC ligand binding domain H4J00_RS03280 PF01266 FAD dependent oxidoreductase H4J00_RS03285 PF01168 Alanine racemase, N-terminal domain H4J00_RS03285 PF00842 Alanine racemase, C-terminal domain H4J00_RS03305 PF00989 PAS fold H4J00_RS03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS03305 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS03320 PF07995 Glucose / Sorbosone dehydrogenase H4J00_RS03340 PF05175 Methyltransferase small domain H4J00_RS03340 PF08468 Methyltransferase small domain N-terminal H4J00_RS03345 PF00849 RNA pseudouridylate synthase H4J00_RS03345 PF01479 S4 domain H4J00_RS03350 PF13419 Haloacid dehalogenase-like hydrolase H4J00_RS03380 PF04461 Protein of unknown function (DUF520) H4J00_RS03385 PF00892 EamA-like transporter family H4J00_RS03390 PF00005 ABC transporter H4J00_RS03390 PF09383 NIL domain H4J00_RS03395 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS03400 PF03180 NLPA lipoprotein H4J00_RS03430 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4J00_RS03430 PF00364 Biotin-requiring enzyme H4J00_RS03430 PF02817 e3 binding domain H4J00_RS03440 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS03440 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4J00_RS03460 PF00119 ATP synthase A chain H4J00_RS03465 PF00137 ATP synthase subunit C H4J00_RS03470 PF00430 ATP synthase B/B' CF(0) H4J00_RS03475 PF00213 ATP synthase delta (OSCP) subunit H4J00_RS03480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4J00_RS03480 PF00306 ATP synthase alpha/beta chain, C terminal domain H4J00_RS03480 PF02874 ATP synthase alpha/beta family, beta-barrel domain H4J00_RS03485 PF00231 ATP synthase H4J00_RS03490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4J00_RS03490 PF02874 ATP synthase alpha/beta family, beta-barrel domain H4J00_RS03495 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H4J00_RS03500 PF01817 Chorismate mutase type II H4J00_RS03510 PF12804 MobA-like NTP transferase domain H4J00_RS03510 PF00132 Bacterial transferase hexapeptide (six repeats) H4J00_RS03510 PF14602 Hexapeptide repeat of succinyl-transferase H4J00_RS03515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS03515 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS03515 PF00989 PAS fold H4J00_RS03520 PF00072 Response regulator receiver domain H4J00_RS03520 PF02954 Bacterial regulatory protein, Fis family H4J00_RS03520 PF00158 Sigma-54 interaction domain H4J00_RS03525 PF02687 FtsX-like permease family H4J00_RS03525 PF00005 ABC transporter H4J00_RS03525 PF12704 MacB-like periplasmic core domain H4J00_RS03530 PF02687 FtsX-like permease family H4J00_RS03530 PF00005 ABC transporter H4J00_RS03530 PF12704 MacB-like periplasmic core domain H4J00_RS03535 PF02687 FtsX-like permease family H4J00_RS03535 PF12704 MacB-like periplasmic core domain H4J00_RS03535 PF00005 ABC transporter H4J00_RS03545 PF00005 ABC transporter H4J00_RS03550 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS03555 PF01380 SIS domain H4J00_RS03580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4J00_RS03605 PF01432 Peptidase family M3 H4J00_RS03615 PF00109 Beta-ketoacyl synthase, N-terminal domain H4J00_RS03615 PF02801 Beta-ketoacyl synthase, C-terminal domain H4J00_RS03620 PF07977 FabA-like domain H4J00_RS03625 PF00817 impB/mucB/samB family H4J00_RS03625 PF11799 impB/mucB/samB family C-terminal domain H4J00_RS03630 PF13419 Haloacid dehalogenase-like hydrolase H4J00_RS03640 PF13185 GAF domain H4J00_RS03655 PF01242 6-pyruvoyl tetrahydropterin synthase H4J00_RS03660 PF00270 DEAD/DEAH box helicase H4J00_RS03660 PF00271 Helicase conserved C-terminal domain H4J00_RS03670 PF14497 Glutathione S-transferase, C-terminal domain H4J00_RS03670 PF02798 Glutathione S-transferase, N-terminal domain H4J00_RS03675 PF00437 Type II/IV secretion system protein H4J00_RS03695 PF00571 CBS domain H4J00_RS03695 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS03700 PF01053 Cys/Met metabolism PLP-dependent enzyme H4J00_RS03710 PF00005 ABC transporter H4J00_RS03715 PF00132 Bacterial transferase hexapeptide (six repeats) H4J00_RS03720 PF00535 Glycosyl transferase family 2 H4J00_RS03725 PF14307 Glycosyltransferase WbsX H4J00_RS03725 PF05045 Rhamnan synthesis protein F H4J00_RS03735 PF01209 ubiE/COQ5 methyltransferase family H4J00_RS03750 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS03750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4J00_RS03755 PF01370 NAD dependent epimerase/dehydratase family H4J00_RS03765 PF00106 short chain dehydrogenase H4J00_RS03770 PF01565 FAD binding domain H4J00_RS03770 PF04030 D-arabinono-1,4-lactone oxidase H4J00_RS03775 PF01040 UbiA prenyltransferase family H4J00_RS03785 PF00766 Electron transfer flavoprotein FAD-binding domain H4J00_RS03785 PF01012 Electron transfer flavoprotein domain H4J00_RS03790 PF01012 Electron transfer flavoprotein domain H4J00_RS03795 PF16363 GDP-mannose 4,6 dehydratase H4J00_RS03800 PF00483 Nucleotidyl transferase H4J00_RS03805 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase H4J00_RS03810 PF04321 RmlD substrate binding domain H4J00_RS03815 PF00483 Nucleotidyl transferase H4J00_RS03815 PF01050 Mannose-6-phosphate isomerase H4J00_RS03820 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H4J00_RS03820 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H4J00_RS03820 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H4J00_RS03820 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H4J00_RS03825 PF01144 Coenzyme A transferase H4J00_RS03830 PF01144 Coenzyme A transferase H4J00_RS03835 PF05045 Rhamnan synthesis protein F H4J00_RS03835 PF14307 Glycosyltransferase WbsX H4J00_RS03855 PF03886 ABC-type transport auxiliary lipoprotein component H4J00_RS03855 PF02470 MlaD protein H4J00_RS03860 PF00005 ABC transporter H4J00_RS03865 PF02405 Permease MlaE H4J00_RS03875 PF00816 H-NS histone family H4J00_RS03880 PF03129 Anticodon binding domain H4J00_RS03880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H4J00_RS03880 PF04073 Aminoacyl-tRNA editing domain H4J00_RS03890 PF01066 CDP-alcohol phosphatidyltransferase H4J00_RS03905 PF00544 Pectate lyase H4J00_RS03910 PF01464 Transglycosylase SLT domain H4J00_RS03910 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H4J00_RS03920 PF08264 Anticodon-binding domain of tRNA H4J00_RS03920 PF10458 Valyl tRNA synthetase tRNA binding arm H4J00_RS03920 PF00133 tRNA synthetases class I (I, L, M and V) H4J00_RS03935 PF02789 Cytosol aminopeptidase family, N-terminal domain H4J00_RS03935 PF00883 Cytosol aminopeptidase family, catalytic domain H4J00_RS03945 PF03739 Lipopolysaccharide export system permease LptF/LptG H4J00_RS03960 PF02899 Phage integrase, N-terminal SAM-like domain H4J00_RS03960 PF00589 Phage integrase family H4J00_RS03965 PF13098 Thioredoxin-like domain H4J00_RS03965 PF10411 Disulfide bond isomerase protein N-terminus H4J00_RS03970 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H4J00_RS03970 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H4J00_RS03970 PF02769 AIR synthase related protein, C-terminal domain H4J00_RS03975 PF05658 Head domain of trimeric autotransporter adhesin H4J00_RS03975 PF13018 Extended Signal Peptide of Type V secretion system H4J00_RS03975 PF05662 Coiled stalk of trimeric autotransporter adhesin H4J00_RS03975 PF03895 YadA-like membrane anchor domain H4J00_RS03980 PF00082 Subtilase family H4J00_RS03980 PF04151 Bacterial pre-peptidase C-terminal domain H4J00_RS03985 PF00437 Type II/IV secretion system protein H4J00_RS03985 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H4J00_RS03995 PF00482 Type II secretion system (T2SS), protein F H4J00_RS04000 PF08334 Type II secretion system (T2SS), protein G H4J00_RS04005 PF12019 Type II transport protein GspH H4J00_RS04010 PF07963 Prokaryotic N-terminal methylation motif H4J00_RS04020 PF03934 Type II secretion system (T2SS), protein K H4J00_RS04025 PF05137 Fimbrial assembly protein (PilN) H4J00_RS04030 PF10741 Type II secretion system (T2SS), protein M subtype b H4J00_RS04040 PF03958 Bacterial type II/III secretion system short domain H4J00_RS04040 PF00263 Bacterial type II and III secretion system protein H4J00_RS04055 PF00392 Bacterial regulatory proteins, gntR family H4J00_RS04055 PF07702 UTRA domain H4J00_RS04065 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS04065 PF00593 TonB dependent receptor H4J00_RS04105 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H4J00_RS04105 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H4J00_RS04115 PF01609 Transposase DDE domain H4J00_RS04115 PF05598 Transposase domain (DUF772) H4J00_RS04130 PF03960 ArsC family H4J00_RS04135 PF01327 Polypeptide deformylase H4J00_RS04170 PF01979 Amidohydrolase family H4J00_RS04175 PF01979 Amidohydrolase family H4J00_RS04195 PF00462 Glutaredoxin H4J00_RS04200 PF01522 Polysaccharide deacetylase H4J00_RS04220 PF00155 Aminotransferase class I and II H4J00_RS04225 PF03193 RsgA GTPase H4J00_RS04240 PF00128 Alpha amylase, catalytic domain H4J00_RS04260 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS04265 PF00106 short chain dehydrogenase H4J00_RS04270 PF03600 Citrate transporter H4J00_RS04280 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS04280 PF00072 Response regulator receiver domain H4J00_RS04285 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS04285 PF08521 Two-component sensor kinase N-terminal H4J00_RS04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS04295 PF00072 Response regulator receiver domain H4J00_RS04295 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS04315 PF03466 LysR substrate binding domain H4J00_RS04315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS04325 PF07690 Major Facilitator Superfamily H4J00_RS04330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS04330 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS04340 PF00375 Sodium:dicarboxylate symporter family H4J00_RS04345 PF03949 Malic enzyme, NAD binding domain H4J00_RS04345 PF00390 Malic enzyme, N-terminal domain H4J00_RS04345 PF01515 Phosphate acetyl/butaryl transferase H4J00_RS04370 PF03279 Bacterial lipid A biosynthesis acyltransferase H4J00_RS04375 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H4J00_RS04380 PF01609 Transposase DDE domain H4J00_RS04380 PF05598 Transposase domain (DUF772) H4J00_RS04385 PF02321 Outer membrane efflux protein H4J00_RS04405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS04410 PF00330 Aconitase family (aconitate hydratase) H4J00_RS04415 PF00694 Aconitase C-terminal domain H4J00_RS04420 PF08241 Methyltransferase domain H4J00_RS04425 PF00180 Isocitrate/isopropylmalate dehydrogenase H4J00_RS04430 PF08502 LeuA allosteric (dimerisation) domain H4J00_RS04430 PF00682 HMGL-like H4J00_RS04435 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS04445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4J00_RS04445 PF00205 Thiamine pyrophosphate enzyme, central domain H4J00_RS04445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4J00_RS04450 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H4J00_RS04450 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H4J00_RS04460 PF01964 Radical SAM ThiC family H4J00_RS04460 PF13667 ThiC-associated domain H4J00_RS04465 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS04465 PF18500 CadC C-terminal domain 1 H4J00_RS04470 PF12833 Helix-turn-helix domain H4J00_RS04475 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS04475 PF00593 TonB dependent receptor H4J00_RS04490 PF00719 Inorganic pyrophosphatase H4J00_RS04500 PF03030 Inorganic H+ pyrophosphatase H4J00_RS04525 PF00365 Phosphofructokinase H4J00_RS04535 PF08245 Mur ligase middle domain H4J00_RS04535 PF01225 Mur ligase family, catalytic domain H4J00_RS04535 PF02875 Mur ligase family, glutamate ligase domain H4J00_RS04545 PF01062 Bestrophin, RFP-TM, chloride channel H4J00_RS04580 PF00027 Cyclic nucleotide-binding domain H4J00_RS04580 PF00520 Ion transport protein H4J00_RS04585 PF00202 Aminotransferase class-III H4J00_RS04605 PF01593 Flavin containing amine oxidoreductase H4J00_RS04610 PF00034 Cytochrome c H4J00_RS04610 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H4J00_RS04625 PF00127 Copper binding proteins, plastocyanin/azurin family H4J00_RS04635 PF00202 Aminotransferase class-III H4J00_RS04645 PF02581 Thiamine monophosphate synthase H4J00_RS04650 PF00301 Rubredoxin H4J00_RS04655 PF13369 Transglutaminase-like superfamily H4J00_RS04665 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H4J00_RS04675 PF01812 5-formyltetrahydrofolate cyclo-ligase family H4J00_RS04685 PF05164 Cell division protein ZapA H4J00_RS04695 PF03695 Uncharacterised protein family (UPF0149) H4J00_RS04700 PF05195 Aminopeptidase P, N-terminal domain H4J00_RS04700 PF00557 Metallopeptidase family M24 H4J00_RS04715 PF00557 Metallopeptidase family M24 H4J00_RS04730 PF04055 Radical SAM superfamily H4J00_RS04730 PF06969 HemN C-terminal domain H4J00_RS04735 PF01725 Ham1 family H4J00_RS04740 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4J00_RS04745 PF03725 3' exoribonuclease family, domain 2 H4J00_RS04745 PF01138 3' exoribonuclease family, domain 1 H4J00_RS04750 PF08340 Domain of unknown function (DUF1732) H4J00_RS04750 PF03755 YicC-like family, N-terminal region H4J00_RS04755 PF00625 Guanylate kinase H4J00_RS04765 PF01192 RNA polymerase Rpb6 H4J00_RS04770 PF13291 ACT domain H4J00_RS04770 PF04607 Region found in RelA / SpoT proteins H4J00_RS04770 PF02824 TGS domain H4J00_RS04775 PF01042 Endoribonuclease L-PSP H4J00_RS04780 PF00270 DEAD/DEAH box helicase H4J00_RS04780 PF00271 Helicase conserved C-terminal domain H4J00_RS04780 PF17191 RecG wedge domain H4J00_RS04785 PF01156 Inosine-uridine preferring nucleoside hydrolase H4J00_RS04790 PF01197 Ribosomal protein L31 H4J00_RS04795 PF00285 Citrate synthase, C-terminal domain H4J00_RS04810 PF00905 Penicillin binding protein transpeptidase domain H4J00_RS04810 PF17092 Penicillin-binding protein OB-like domain H4J00_RS04810 PF00912 Transglycosylase H4J00_RS04815 PF11104 Type IV pilus assembly protein PilM; H4J00_RS04820 PF05137 Fimbrial assembly protein (PilN) H4J00_RS04825 PF04350 Pilus assembly protein, PilO H4J00_RS04830 PF04351 Pilus assembly protein, PilP H4J00_RS04835 PF11741 AMIN domain H4J00_RS04835 PF00263 Bacterial type II and III secretion system protein H4J00_RS04835 PF03958 Bacterial type II/III secretion system short domain H4J00_RS04835 PF07660 Secretin and TonB N terminus short domain H4J00_RS04845 PF07726 ATPase family associated with various cellular activities (AAA) H4J00_RS04845 PF17863 AAA lid domain H4J00_RS04865 PF07584 Aerotolerance regulator N-terminal H4J00_RS04865 PF00092 von Willebrand factor type A domain H4J00_RS04900 PF02779 Transketolase, pyrimidine binding domain H4J00_RS04900 PF00456 Transketolase, thiamine diphosphate binding domain H4J00_RS04900 PF02780 Transketolase, C-terminal domain H4J00_RS05000 PF00005 ABC transporter H4J00_RS05000 PF03459 TOBE domain H4J00_RS05005 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS05015 PF00753 Metallo-beta-lactamase superfamily H4J00_RS05015 PF04273 Putative phosphatase (DUF442) H4J00_RS05025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H4J00_RS05025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H4J00_RS05040 PF00162 Phosphoglycerate kinase H4J00_RS05045 PF13419 Haloacid dehalogenase-like hydrolase H4J00_RS05050 PF00224 Pyruvate kinase, barrel domain H4J00_RS05050 PF02887 Pyruvate kinase, alpha/beta domain H4J00_RS05055 PF00274 Fructose-bisphosphate aldolase class-I H4J00_RS05060 PF01661 Macro domain H4J00_RS05070 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS05075 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4J00_RS05075 PF14824 Sirohaem biosynthesis protein central H4J00_RS05075 PF10414 Sirohaem synthase dimerisation region H4J00_RS05080 PF03466 LysR substrate binding domain H4J00_RS05080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS05100 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS05100 PF01627 Hpt domain H4J00_RS05100 PF00072 Response regulator receiver domain H4J00_RS05100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS05100 PF00672 HAMP domain H4J00_RS05120 PF01507 Phosphoadenosine phosphosulfate reductase family H4J00_RS05125 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H4J00_RS05125 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H4J00_RS05130 PF00667 FAD binding domain H4J00_RS05130 PF00258 Flavodoxin H4J00_RS05130 PF00175 Oxidoreductase NAD-binding domain H4J00_RS05135 PF01507 Phosphoadenosine phosphosulfate reductase family H4J00_RS05140 PF00009 Elongation factor Tu GTP binding domain H4J00_RS05145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS05145 PF00529 HlyD membrane-fusion protein of T1SS H4J00_RS05150 PF00873 AcrB/AcrD/AcrF family H4J00_RS05155 PF01433 Peptidase family M1 domain H4J00_RS05155 PF11838 ERAP1-like C-terminal domain H4J00_RS05185 PF08032 RNA 2'-O ribose methyltransferase substrate binding H4J00_RS05185 PF00588 SpoU rRNA Methylase family H4J00_RS05210 PF01741 Large-conductance mechanosensitive channel, MscL H4J00_RS05215 PF01557 Fumarylacetoacetate (FAA) hydrolase family H4J00_RS05235 PF02080 TrkA-C domain H4J00_RS05235 PF03600 Citrate transporter H4J00_RS05240 PF02390 Putative methyltransferase H4J00_RS05245 PF05690 Thiazole biosynthesis protein ThiG H4J00_RS05255 PF03797 Autotransporter beta-domain H4J00_RS05255 PF00657 GDSL-like Lipase/Acylhydrolase H4J00_RS05265 PF05598 Transposase domain (DUF772) H4J00_RS05265 PF01609 Transposase DDE domain H4J00_RS05285 PF00709 Adenylosuccinate synthetase H4J00_RS05295 PF04002 RadC-like JAB domain H4J00_RS05315 PF07693 KAP family P-loop domain H4J00_RS05330 PF01026 TatD related DNase H4J00_RS05350 PF01609 Transposase DDE domain H4J00_RS05350 PF05598 Transposase domain (DUF772) H4J00_RS05390 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4J00_RS05390 PF00128 Alpha amylase, catalytic domain H4J00_RS05395 PF08443 RimK-like ATP-grasp domain H4J00_RS05395 PF18030 RimK PreATP-grasp domain H4J00_RS05405 PF00072 Response regulator receiver domain H4J00_RS05405 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS05410 PF11808 Phosphate regulon sensor protein PhoR H4J00_RS05410 PF00989 PAS fold H4J00_RS05410 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS05430 PF01121 Dephospho-CoA kinase H4J00_RS05435 PF01478 Type IV leader peptidase family H4J00_RS05435 PF06750 Bacterial Peptidase A24 N-terminal domain H4J00_RS05440 PF00482 Type II secretion system (T2SS), protein F H4J00_RS05445 PF07963 Prokaryotic N-terminal methylation motif H4J00_RS05445 PF00114 Pilin (bacterial filament) H4J00_RS05450 PF08019 Phosphoethanolamine transferase EptA/EptB H4J00_RS05450 PF00884 Sulfatase H4J00_RS05465 PF00437 Type II/IV secretion system protein H4J00_RS05465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H4J00_RS05470 PF17841 BID domain of Bartonella effector protein (Bep) H4J00_RS05470 PF02661 Fic/DOC family H4J00_RS05480 PF00158 Sigma-54 interaction domain H4J00_RS05480 PF02954 Bacterial regulatory protein, Fis family H4J00_RS05480 PF00072 Response regulator receiver domain H4J00_RS05485 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS05485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS05490 PF00549 CoA-ligase H4J00_RS05490 PF08442 ATP-grasp domain H4J00_RS05495 PF00549 CoA-ligase H4J00_RS05495 PF02629 CoA binding domain H4J00_RS05510 PF02540 NAD synthase H4J00_RS05510 PF00795 Carbon-nitrogen hydrolase H4J00_RS05515 PF13525 Outer membrane lipoprotein H4J00_RS05520 PF00849 RNA pseudouridylate synthase H4J00_RS05525 PF02578 Multi-copper polyphenol oxidoreductase laccase H4J00_RS05535 PF04134 Protein of unknown function, DUF393 H4J00_RS05540 PF00672 HAMP domain H4J00_RS05540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS05540 PF02203 Tar ligand binding domain homologue H4J00_RS05545 PF01011 PQQ enzyme repeat H4J00_RS05550 PF00982 Glycosyltransferase family 20 H4J00_RS05555 PF00723 Glycosyl hydrolases family 15 H4J00_RS05560 PF02358 Trehalose-phosphatase H4J00_RS05570 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS05570 PF00593 TonB dependent receptor H4J00_RS05600 PF04376 Arginine-tRNA-protein transferase, N terminus H4J00_RS05600 PF04377 Arginine-tRNA-protein transferase, C terminus H4J00_RS05630 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS05645 PF00005 ABC transporter H4J00_RS05645 PF17760 UvrA interaction domain H4J00_RS05645 PF17755 UvrA DNA-binding domain H4J00_RS05650 PF00829 Ribosomal prokaryotic L21 protein H4J00_RS05655 PF01016 Ribosomal L27 protein H4J00_RS05660 PF01018 GTP1/OBG H4J00_RS05660 PF01926 50S ribosome-binding GTPase H4J00_RS05665 PF01649 Ribosomal protein S20 H4J00_RS05670 PF03023 Lipid II flippase MurJ H4J00_RS05675 PF06574 FAD synthetase H4J00_RS05675 PF01687 Riboflavin kinase H4J00_RS05680 PF06827 Zinc finger found in FPG and IleRS H4J00_RS05680 PF00133 tRNA synthetases class I (I, L, M and V) H4J00_RS05680 PF08264 Anticodon-binding domain of tRNA H4J00_RS05685 PF01252 Signal peptidase (SPase) II H4J00_RS05690 PF02401 LytB protein H4J00_RS05700 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H4J00_RS05700 PF06481 COX Aromatic Rich Motif H4J00_RS05705 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4J00_RS05710 PF00510 Cytochrome c oxidase subunit III H4J00_RS05715 PF03626 Prokaryotic Cytochrome C oxidase subunit IV H4J00_RS05725 PF06715 Gp5 C-terminal repeat (3 copies) H4J00_RS05725 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS05735 PF03527 RHS protein H4J00_RS05735 PF14220 Domain of unknown function (DUF4329) H4J00_RS05735 PF05593 RHS Repeat H4J00_RS05750 PF03527 RHS protein H4J00_RS05750 PF05593 RHS Repeat H4J00_RS05770 PF13936 Helix-turn-helix domain H4J00_RS05770 PF00665 Integrase core domain H4J00_RS05780 PF01609 Transposase DDE domain H4J00_RS05780 PF05598 Transposase domain (DUF772) H4J00_RS05795 PF18073 Rubredoxin metal binding domain H4J00_RS05825 PF12833 Helix-turn-helix domain H4J00_RS05830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS05830 PF00183 Hsp90 protein H4J00_RS05840 PF08678 Rsbr N terminal H4J00_RS05840 PF01740 STAS domain H4J00_RS05845 PF01740 STAS domain H4J00_RS05850 PF13581 Histidine kinase-like ATPase domain H4J00_RS05860 PF01627 Hpt domain H4J00_RS05860 PF17149 Periplasmic sensor domain found in signal transduction proteins H4J00_RS05860 PF00672 HAMP domain H4J00_RS05860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS05860 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS05860 PF00072 Response regulator receiver domain H4J00_RS05865 PF00072 Response regulator receiver domain H4J00_RS05865 PF13188 PAS domain H4J00_RS05865 PF08448 PAS fold H4J00_RS05865 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS05880 PF06964 Alpha-L-arabinofuranosidase C-terminal domain H4J00_RS05885 PF01263 Aldose 1-epimerase H4J00_RS05890 PF01578 Cytochrome C assembly protein H4J00_RS05895 PF02978 Signal peptide binding domain H4J00_RS05895 PF02881 SRP54-type protein, helical bundle domain H4J00_RS05895 PF00448 SRP54-type protein, GTPase domain H4J00_RS05905 PF03060 Nitronate monooxygenase H4J00_RS05915 PF00886 Ribosomal protein S16 H4J00_RS05920 PF01782 RimM N-terminal domain H4J00_RS05920 PF05239 PRC-barrel domain H4J00_RS05925 PF01746 tRNA (Guanine-1)-methyltransferase H4J00_RS05930 PF01245 Ribosomal protein L19 H4J00_RS05940 PF01554 MatE H4J00_RS05945 PF01479 S4 domain H4J00_RS05950 PF00141 Peroxidase H4J00_RS05960 PF01624 MutS domain I H4J00_RS05960 PF05188 MutS domain II H4J00_RS05960 PF05192 MutS domain III H4J00_RS05960 PF05190 MutS family domain IV H4J00_RS05960 PF00488 MutS domain V H4J00_RS05970 PF01541 GIY-YIG catalytic domain H4J00_RS05975 PF10431 C-terminal, D2-small domain, of ClpB protein H4J00_RS05975 PF02861 Clp amino terminal domain, pathogenicity island component H4J00_RS05975 PF17871 AAA lid domain H4J00_RS05975 PF07724 AAA domain (Cdc48 subfamily) H4J00_RS05975 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS06010 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H4J00_RS06015 PF02277 Phosphoribosyltransferase H4J00_RS06025 PF02654 Cobalamin-5-phosphate synthase H4J00_RS06035 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H4J00_RS06035 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H4J00_RS06040 PF04183 IucA / IucC family H4J00_RS06040 PF06276 Ferric iron reductase FhuF-like transporter H4J00_RS06045 PF07690 Major Facilitator Superfamily H4J00_RS06050 PF04183 IucA / IucC family H4J00_RS06050 PF06276 Ferric iron reductase FhuF-like transporter H4J00_RS06060 PF07660 Secretin and TonB N terminus short domain H4J00_RS06060 PF00593 TonB dependent receptor H4J00_RS06060 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS06075 PF00999 Sodium/hydrogen exchanger family H4J00_RS06075 PF02254 TrkA-N domain H4J00_RS06085 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS06085 PF00593 TonB dependent receptor H4J00_RS06090 PF00593 TonB dependent receptor H4J00_RS06090 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS06100 PF00593 TonB dependent receptor H4J00_RS06100 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS06105 PF12848 ABC transporter H4J00_RS06105 PF00005 ABC transporter H4J00_RS06120 PF03466 LysR substrate binding domain H4J00_RS06120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS06130 PF07859 alpha/beta hydrolase fold H4J00_RS06130 PF13472 GDSL-like Lipase/Acylhydrolase family H4J00_RS06140 PF04185 Phosphoesterase family H4J00_RS06140 PF05506 Domain of unknown function (DUF756) H4J00_RS06145 PF07690 Major Facilitator Superfamily H4J00_RS06160 PF02938 GAD domain H4J00_RS06160 PF00152 tRNA synthetases class II (D, K and N) H4J00_RS06160 PF01336 OB-fold nucleic acid binding domain H4J00_RS06175 PF01709 Transcriptional regulator H4J00_RS06180 PF02075 Crossover junction endodeoxyribonuclease RuvC H4J00_RS06185 PF07499 RuvA, C-terminal domain H4J00_RS06185 PF01330 RuvA N terminal domain H4J00_RS06190 PF02705 K+ potassium transporter H4J00_RS06195 PF05496 Holliday junction DNA helicase RuvB P-loop domain H4J00_RS06195 PF05491 RuvB C-terminal winged helix domain H4J00_RS06195 PF17864 RuvB AAA lid domain H4J00_RS06200 PF03061 Thioesterase superfamily H4J00_RS06205 PF01618 MotA/TolQ/ExbB proton channel family H4J00_RS06210 PF02472 Biopolymer transport protein ExbD/TolR H4J00_RS06220 PF07676 WD40-like Beta Propeller Repeat H4J00_RS06220 PF04052 TolB amino-terminal domain H4J00_RS06225 PF00691 OmpA family H4J00_RS06235 PF04055 Radical SAM superfamily H4J00_RS06245 PF11799 impB/mucB/samB family C-terminal domain H4J00_RS06245 PF11798 IMS family HHH motif H4J00_RS06245 PF00817 impB/mucB/samB family H4J00_RS06245 PF13438 Domain of unknown function (DUF4113) H4J00_RS06275 PF01555 DNA methylase H4J00_RS06330 PF00182 Chitinase class I H4J00_RS06505 PF06508 Queuosine biosynthesis protein QueC H4J00_RS06535 PF01479 S4 domain H4J00_RS06535 PF00849 RNA pseudouridylate synthase H4J00_RS06550 PF00271 Helicase conserved C-terminal domain H4J00_RS06550 PF00570 HRDC domain H4J00_RS06550 PF16124 RecQ zinc-binding H4J00_RS06550 PF00270 DEAD/DEAH box helicase H4J00_RS06550 PF09382 RQC domain H4J00_RS06555 PF00210 Ferritin-like domain H4J00_RS06560 PF00270 DEAD/DEAH box helicase H4J00_RS06560 PF11898 Domain of unknown function (DUF3418) H4J00_RS06560 PF04408 Helicase associated domain (HA2) H4J00_RS06560 PF00271 Helicase conserved C-terminal domain H4J00_RS06560 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H4J00_RS06585 PF13186 Iron-sulfur cluster-binding domain H4J00_RS06585 PF04055 Radical SAM superfamily H4J00_RS06590 PF05402 Coenzyme PQQ synthesis protein D (PqqD) H4J00_RS06595 PF03070 TENA/THI-4/PQQC family H4J00_RS06600 PF12706 Beta-lactamase superfamily domain H4J00_RS06605 PF08042 PqqA family H4J00_RS06610 PF02824 TGS domain H4J00_RS06610 PF13291 ACT domain H4J00_RS06610 PF04607 Region found in RelA / SpoT proteins H4J00_RS06620 PF00535 Glycosyl transferase family 2 H4J00_RS06625 PF14814 Bifunctional transglycosylase second domain H4J00_RS06625 PF00912 Transglycosylase H4J00_RS06625 PF00905 Penicillin binding protein transpeptidase domain H4J00_RS06635 PF13307 Helicase C-terminal domain H4J00_RS06635 PF04851 Type III restriction enzyme, res subunit H4J00_RS06640 PF00814 Glycoprotease family H4J00_RS06655 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H4J00_RS06655 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H4J00_RS06660 PF00072 Response regulator receiver domain H4J00_RS06665 PF00072 Response regulator receiver domain H4J00_RS06670 PF01584 CheW-like domain H4J00_RS06675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS06675 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H4J00_RS06680 PF01627 Hpt domain H4J00_RS06680 PF01584 CheW-like domain H4J00_RS06680 PF02895 Signal transducing histidine kinase, homodimeric domain H4J00_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS06680 PF00072 Response regulator receiver domain H4J00_RS06695 PF13302 Acetyltransferase (GNAT) domain H4J00_RS06705 PF12450 von Willebrand factor H4J00_RS06705 PF00092 von Willebrand factor type A domain H4J00_RS06705 PF12034 Domain of unknown function (DUF3520) H4J00_RS06710 PF01112 Asparaginase H4J00_RS06715 PF03932 CutC family H4J00_RS06745 PF01301 Glycosyl hydrolases family 35 H4J00_RS06755 PF07971 Glycosyl hydrolase family 92 H4J00_RS06755 PF17678 Glycosyl hydrolase family 92 N-terminal domain H4J00_RS06770 PF13936 Helix-turn-helix domain H4J00_RS06770 PF00665 Integrase core domain H4J00_RS06780 PF00005 ABC transporter H4J00_RS06780 PF03412 Peptidase C39 family H4J00_RS06780 PF00664 ABC transporter transmembrane region H4J00_RS06785 PF14310 Fibronectin type III-like domain H4J00_RS06785 PF00933 Glycosyl hydrolase family 3 N terminal domain H4J00_RS06785 PF01915 Glycosyl hydrolase family 3 C-terminal domain H4J00_RS06785 PF07691 PA14 domain H4J00_RS06795 PF00728 Glycosyl hydrolase family 20, catalytic domain H4J00_RS06795 PF02838 Glycosyl hydrolase family 20, domain 2 H4J00_RS06795 PF07691 PA14 domain H4J00_RS06800 PF00704 Glycosyl hydrolases family 18 H4J00_RS06800 PF01476 LysM domain H4J00_RS06815 PF02685 Glucokinase H4J00_RS06820 PF04452 RNA methyltransferase H4J00_RS06825 PF00202 Aminotransferase class-III H4J00_RS06830 PF00293 NUDIX domain H4J00_RS06835 PF00459 Inositol monophosphatase family H4J00_RS06840 PF03819 MazG nucleotide pyrophosphohydrolase domain H4J00_RS06845 PF02694 Uncharacterised BCR, YnfA/UPF0060 family H4J00_RS06855 PF01145 SPFH domain / Band 7 family H4J00_RS06855 PF16200 C-terminal region of band_7 H4J00_RS06865 PF01571 Aminomethyltransferase folate-binding domain H4J00_RS06865 PF08669 Glycine cleavage T-protein C-terminal barrel domain H4J00_RS06870 PF01597 Glycine cleavage H-protein H4J00_RS06900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4J00_RS06900 PF09317 Domain of unknown function (DUF1974) H4J00_RS06900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4J00_RS06910 PF00440 Bacterial regulatory proteins, tetR family H4J00_RS06915 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS06915 PF00593 TonB dependent receptor H4J00_RS06925 PF01430 Hsp33 protein H4J00_RS06930 PF00912 Transglycosylase H4J00_RS06935 PF00535 Glycosyl transferase family 2 H4J00_RS06940 PF00571 CBS domain H4J00_RS06940 PF00478 IMP dehydrogenase / GMP reductase domain H4J00_RS06955 PF03006 Haemolysin-III related H4J00_RS06960 PF16658 Class II release factor RF3, C-terminal domain H4J00_RS06960 PF00009 Elongation factor Tu GTP binding domain H4J00_RS06965 PF01551 Peptidase family M23 H4J00_RS06965 PF01476 LysM domain H4J00_RS06965 PF08525 Opacity-associated protein A N-terminal motif H4J00_RS06970 PF00561 alpha/beta hydrolase fold H4J00_RS06975 PF01053 Cys/Met metabolism PLP-dependent enzyme H4J00_RS06985 PF03315 Serine dehydratase beta chain H4J00_RS06985 PF03313 Serine dehydratase alpha chain H4J00_RS07010 PF04264 YceI-like domain H4J00_RS07015 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS07015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS07015 PF00072 Response regulator receiver domain H4J00_RS07015 PF01627 Hpt domain H4J00_RS07020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS07020 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS07020 PF09308 LuxQ, periplasmic H4J00_RS07020 PF00072 Response regulator receiver domain H4J00_RS07025 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS07025 PF00072 Response regulator receiver domain H4J00_RS07025 PF00672 HAMP domain H4J00_RS07025 PF17149 Periplasmic sensor domain found in signal transduction proteins H4J00_RS07025 PF01627 Hpt domain H4J00_RS07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS07035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS07035 PF00672 HAMP domain H4J00_RS07035 PF17149 Periplasmic sensor domain found in signal transduction proteins H4J00_RS07035 PF01627 Hpt domain H4J00_RS07035 PF00072 Response regulator receiver domain H4J00_RS07035 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS07075 PF01381 Helix-turn-helix H4J00_RS07075 PF06114 IrrE N-terminal-like domain H4J00_RS07075 PF09856 Predicted transcriptional regulator (DUF2083) H4J00_RS07080 PF00171 Aldehyde dehydrogenase family H4J00_RS07085 PF02770 Acyl-CoA dehydrogenase, middle domain H4J00_RS07085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4J00_RS07085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4J00_RS07090 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS07095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4J00_RS07095 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS07095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4J00_RS07100 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H4J00_RS07100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H4J00_RS07105 PF01545 Cation efflux family H4J00_RS07110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4J00_RS07110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4J00_RS07110 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS07115 PF08281 Sigma-70, region 4 H4J00_RS07115 PF04542 Sigma-70 region 2 H4J00_RS07125 PF13180 PDZ domain H4J00_RS07130 PF00679 Elongation factor G C-terminus H4J00_RS07130 PF00009 Elongation factor Tu GTP binding domain H4J00_RS07130 PF03144 Elongation factor Tu domain 2 H4J00_RS07130 PF06421 GTP-binding protein LepA C-terminus H4J00_RS07135 PF10502 Signal peptidase, peptidase S26 H4J00_RS07145 PF14622 Ribonuclease-III-like H4J00_RS07145 PF00035 Double-stranded RNA binding motif H4J00_RS07150 PF07650 KH domain H4J00_RS07150 PF01926 50S ribosome-binding GTPase H4J00_RS07155 PF02565 Recombination protein O C terminal H4J00_RS07155 PF11967 Recombination protein O N terminal H4J00_RS07165 PF05958 tRNA (Uracil-5-)-methyltransferase H4J00_RS07170 PF01928 CYTH domain H4J00_RS07175 PF01323 DSBA-like thioredoxin domain H4J00_RS07180 PF01593 Flavin containing amine oxidoreductase H4J00_RS07185 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H4J00_RS07190 PF00933 Glycosyl hydrolase family 3 N terminal domain H4J00_RS07195 PF00156 Phosphoribosyl transferase domain H4J00_RS07200 PF01048 Phosphorylase superfamily H4J00_RS07205 PF00313 'Cold-shock' DNA-binding domain H4J00_RS07225 PF00270 DEAD/DEAH box helicase H4J00_RS07225 PF08494 DEAD/H associated H4J00_RS07225 PF00271 Helicase conserved C-terminal domain H4J00_RS07230 PF04679 ATP dependent DNA ligase C terminal region H4J00_RS07230 PF01068 ATP dependent DNA ligase domain H4J00_RS07230 PF04675 DNA ligase N terminus H4J00_RS07240 PF04675 DNA ligase N terminus H4J00_RS07240 PF04679 ATP dependent DNA ligase C terminal region H4J00_RS07240 PF01068 ATP dependent DNA ligase domain H4J00_RS07255 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS07270 PF02803 Thiolase, C-terminal domain H4J00_RS07270 PF00108 Thiolase, N-terminal domain H4J00_RS07275 PF03797 Autotransporter beta-domain H4J00_RS07275 PF12951 Passenger-associated-transport-repeat H4J00_RS07275 PF00082 Subtilase family H4J00_RS07280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase H4J00_RS07280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain H4J00_RS07295 PF01863 Protein of unknown function DUF45 H4J00_RS07300 PF07043 Protein of unknown function (DUF1328) H4J00_RS07310 PF01258 Prokaryotic dksA/traR C4-type zinc finger H4J00_RS07360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H4J00_RS07370 PF03831 PhnA domain H4J00_RS07370 PF08274 PhnA Zinc-Ribbon H4J00_RS07380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4J00_RS07385 PF07690 Major Facilitator Superfamily H4J00_RS07420 PF09924 Uncharacterised conserved protein (DUF2156) H4J00_RS07420 PF03706 Lysylphosphatidylglycerol synthase TM region H4J00_RS07430 PF01042 Endoribonuclease L-PSP H4J00_RS07475 PF04542 Sigma-70 region 2 H4J00_RS07475 PF04545 Sigma-70, region 4 H4J00_RS07490 PF04060 Putative Fe-S cluster H4J00_RS07500 PF01588 Putative tRNA binding domain H4J00_RS07500 PF09334 tRNA synthetases class I (M) H4J00_RS07510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4J00_RS07515 PF00324 Amino acid permease H4J00_RS07520 PF02574 Homocysteine S-methyltransferase H4J00_RS07535 PF02592 Putative vitamin uptake transporter H4J00_RS07555 PF03551 Transcriptional regulator PadR-like family H4J00_RS07580 PF03653 Uncharacterised protein family (UPF0093) H4J00_RS07605 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H4J00_RS07610 PF14579 Helix-hairpin-helix motif H4J00_RS07610 PF02811 PHP domain H4J00_RS07610 PF01336 OB-fold nucleic acid binding domain H4J00_RS07610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H4J00_RS07610 PF07733 Bacterial DNA polymerase III alpha NTPase domain H4J00_RS07615 PF01351 Ribonuclease HII H4J00_RS07620 PF02684 Lipid-A-disaccharide synthetase H4J00_RS07625 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H4J00_RS07625 PF00132 Bacterial transferase hexapeptide (six repeats) H4J00_RS07630 PF07977 FabA-like domain H4J00_RS07635 PF00132 Bacterial transferase hexapeptide (six repeats) H4J00_RS07635 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H4J00_RS07640 PF05598 Transposase domain (DUF772) H4J00_RS07640 PF01609 Transposase DDE domain H4J00_RS07645 PF01103 Surface antigen H4J00_RS07645 PF07244 Surface antigen variable number repeat H4J00_RS07650 PF17820 PDZ domain H4J00_RS07650 PF02163 Peptidase family M50 H4J00_RS07655 PF13288 DXP reductoisomerase C-terminal domain H4J00_RS07655 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H4J00_RS07655 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H4J00_RS07665 PF01255 Putative undecaprenyl diphosphate synthase H4J00_RS07670 PF01765 Ribosome recycling factor H4J00_RS07675 PF00696 Amino acid kinase family H4J00_RS07680 PF00072 Response regulator receiver domain H4J00_RS07680 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS07685 PF00889 Elongation factor TS H4J00_RS07690 PF00318 Ribosomal protein S2 H4J00_RS07725 PF00557 Metallopeptidase family M24 H4J00_RS07730 PF08335 GlnD PII-uridylyltransferase H4J00_RS07730 PF01966 HD domain H4J00_RS07730 PF01909 Nucleotidyltransferase domain H4J00_RS07735 PF00132 Bacterial transferase hexapeptide (six repeats) H4J00_RS07735 PF14602 Hexapeptide repeat of succinyl-transferase H4J00_RS07735 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal H4J00_RS07745 PF03960 ArsC family H4J00_RS07755 PF07687 Peptidase dimerisation domain H4J00_RS07755 PF01546 Peptidase family M20/M25/M40 H4J00_RS07760 PF00733 Asparagine synthase H4J00_RS07760 PF13537 Glutamine amidotransferase domain H4J00_RS07770 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS07770 PF00593 TonB dependent receptor H4J00_RS07775 PF01804 Penicillin amidase H4J00_RS07780 PF00210 Ferritin-like domain H4J00_RS07785 PF00521 DNA gyrase/topoisomerase IV, subunit A H4J00_RS07785 PF03989 DNA gyrase C-terminal domain, beta-propeller H4J00_RS07790 PF12833 Helix-turn-helix domain H4J00_RS07800 PF02321 Outer membrane efflux protein H4J00_RS07805 PF00529 HlyD membrane-fusion protein of T1SS H4J00_RS07805 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS07810 PF07690 Major Facilitator Superfamily H4J00_RS07835 PF14310 Fibronectin type III-like domain H4J00_RS07835 PF00933 Glycosyl hydrolase family 3 N terminal domain H4J00_RS07835 PF01915 Glycosyl hydrolase family 3 C-terminal domain H4J00_RS07870 PF12802 MarR family H4J00_RS07880 PF04542 Sigma-70 region 2 H4J00_RS07880 PF08281 Sigma-70, region 4 H4J00_RS07920 PF00255 Glutathione peroxidase H4J00_RS07925 PF00970 Oxidoreductase FAD-binding domain H4J00_RS07925 PF00175 Oxidoreductase NAD-binding domain H4J00_RS07930 PF00005 ABC transporter H4J00_RS07935 PF05681 Fumarate hydratase (Fumerase) H4J00_RS07935 PF05683 Fumarase C-terminus H4J00_RS07950 PF02253 Phospholipase A1 H4J00_RS07975 PF00313 'Cold-shock' DNA-binding domain H4J00_RS07990 PF00899 ThiF family H4J00_RS07995 PF01026 TatD related DNase H4J00_RS08010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4J00_RS08010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4J00_RS08010 PF02770 Acyl-CoA dehydrogenase, middle domain H4J00_RS08020 PF00043 Glutathione S-transferase, C-terminal domain H4J00_RS08020 PF02798 Glutathione S-transferase, N-terminal domain H4J00_RS08025 PF13537 Glutamine amidotransferase domain H4J00_RS08025 PF00733 Asparagine synthase H4J00_RS08030 PF03358 NADPH-dependent FMN reductase H4J00_RS08035 PF00772 DnaB-like helicase N terminal domain H4J00_RS08035 PF03796 DnaB-like helicase C terminal domain H4J00_RS08040 PF00875 DNA photolyase H4J00_RS08040 PF03441 FAD binding domain of DNA photolyase H4J00_RS08050 PF00691 OmpA family H4J00_RS08050 PF05736 OprF membrane domain H4J00_RS08065 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS08075 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS08090 PF10609 NUBPL iron-transfer P-loop NTPase H4J00_RS08095 PF00692 dUTPase H4J00_RS08115 PF01738 Dienelactone hydrolase family H4J00_RS08120 PF00919 Uncharacterized protein family UPF0004 H4J00_RS08120 PF18693 TRAM domain H4J00_RS08120 PF04055 Radical SAM superfamily H4J00_RS08135 PF03449 Transcription elongation factor, N-terminal H4J00_RS08135 PF01272 Transcription elongation factor, GreA/GreB, C-term H4J00_RS08155 PF05872 Bacterial protein of unknown function (DUF853) H4J00_RS08170 PF02666 Phosphatidylserine decarboxylase H4J00_RS08175 PF02630 SCO1/SenC H4J00_RS08180 PF05175 Methyltransferase small domain H4J00_RS08185 PF01264 Chorismate synthase H4J00_RS08190 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4J00_RS08190 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4J00_RS08195 PF02774 Semialdehyde dehydrogenase, dimerisation domain H4J00_RS08195 PF01118 Semialdehyde dehydrogenase, NAD binding domain H4J00_RS08215 PF01416 tRNA pseudouridine synthase H4J00_RS08220 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H4J00_RS08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS08225 PF03466 LysR substrate binding domain H4J00_RS08230 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS08240 PF00290 Tryptophan synthase alpha chain H4J00_RS08245 PF01039 Carboxyl transferase domain H4J00_RS08245 PF17848 Acetyl-coA carboxylase zinc finger domain H4J00_RS08250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H4J00_RS08250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H4J00_RS08250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H4J00_RS08250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H4J00_RS08265 PF00563 EAL domain H4J00_RS08265 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS08265 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS08290 PF00121 Triosephosphate isomerase H4J00_RS08295 PF03840 Preprotein translocase SecG subunit H4J00_RS08305 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 H4J00_RS08310 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit H4J00_RS08315 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit H4J00_RS08320 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit H4J00_RS08330 PF10531 SLBB domain H4J00_RS08330 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H4J00_RS08330 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region H4J00_RS08335 PF00384 Molybdopterin oxidoreductase H4J00_RS08335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H4J00_RS08335 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal H4J00_RS08340 PF00146 NADH dehydrogenase H4J00_RS08345 PF12838 4Fe-4S dicluster domain H4J00_RS08350 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 H4J00_RS08355 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H4J00_RS08360 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H4J00_RS08360 PF00361 Proton-conducting membrane transporter H4J00_RS08365 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus H4J00_RS08365 PF00361 Proton-conducting membrane transporter H4J00_RS08370 PF00361 Proton-conducting membrane transporter H4J00_RS08380 PF17384 RimP C-terminal SH3 domain H4J00_RS08380 PF02576 RimP N-terminal domain H4J00_RS08385 PF00575 S1 RNA binding domain H4J00_RS08385 PF13184 NusA-like KH domain H4J00_RS08385 PF08529 NusA N-terminal domain H4J00_RS08390 PF00009 Elongation factor Tu GTP binding domain H4J00_RS08390 PF04760 Translation initiation factor IF-2, N-terminal region H4J00_RS08390 PF08364 Bacterial translation initiation factor IF-2 associated region H4J00_RS08390 PF11987 Translation-initiation factor 2 H4J00_RS08395 PF02033 Ribosome-binding factor A H4J00_RS08400 PF09157 Pseudouridine synthase II TruB, C-terminal H4J00_RS08400 PF16198 tRNA pseudouridylate synthase B C-terminal domain H4J00_RS08400 PF01509 TruB family pseudouridylate synthase (N terminal domain) H4J00_RS08405 PF00312 Ribosomal protein S15 H4J00_RS08410 PF00575 S1 RNA binding domain H4J00_RS08410 PF03725 3' exoribonuclease family, domain 2 H4J00_RS08410 PF01138 3' exoribonuclease family, domain 1 H4J00_RS08410 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H4J00_RS08410 PF00013 KH domain H4J00_RS08420 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H4J00_RS08420 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H4J00_RS08430 PF00731 AIR carboxylase H4J00_RS08435 PF02222 ATP-grasp domain H4J00_RS08435 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H4J00_RS08440 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H4J00_RS08440 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H4J00_RS08445 PF00462 Glutaredoxin H4J00_RS08455 PF01914 MarC family integral membrane protein H4J00_RS08465 PF00593 TonB dependent receptor H4J00_RS08470 PF03641 Possible lysine decarboxylase H4J00_RS08470 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases H4J00_RS08470 PF11892 Domain of unknown function (DUF3412) H4J00_RS08475 PF07963 Prokaryotic N-terminal methylation motif H4J00_RS08475 PF12019 Type II transport protein GspH H4J00_RS08495 PF05567 Neisseria PilC beta-propeller domain H4J00_RS08500 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor H4J00_RS08500 PF07963 Prokaryotic N-terminal methylation motif H4J00_RS08565 PF00589 Phage integrase family H4J00_RS08565 PF02899 Phage integrase, N-terminal SAM-like domain H4J00_RS08570 PF07963 Prokaryotic N-terminal methylation motif H4J00_RS08570 PF00114 Pilin (bacterial filament) H4J00_RS08575 PF00271 Helicase conserved C-terminal domain H4J00_RS08575 PF04851 Type III restriction enzyme, res subunit H4J00_RS08575 PF02151 UvrB/uvrC motif H4J00_RS08575 PF12344 Ultra-violet resistance protein B H4J00_RS08575 PF17757 UvrB interaction domain H4J00_RS08590 PF03377 TAL effector repeat H4J00_RS08605 PF03377 TAL effector repeat H4J00_RS08625 PF17391 Urocanase N-terminal domain H4J00_RS08625 PF17392 Urocanase C-terminal domain H4J00_RS08625 PF01175 Urocanase Rossmann-like domain H4J00_RS08635 PF00221 Aromatic amino acid lyase H4J00_RS08640 PF07969 Amidohydrolase family H4J00_RS08650 PF07702 UTRA domain H4J00_RS08650 PF00392 Bacterial regulatory proteins, gntR family H4J00_RS08675 PF01794 Ferric reductase like transmembrane component H4J00_RS08680 PF00174 Oxidoreductase molybdopterin binding domain H4J00_RS08685 PF00266 Aminotransferase class-V H4J00_RS08690 PF01842 ACT domain H4J00_RS08690 PF01817 Chorismate mutase type II H4J00_RS08690 PF00800 Prephenate dehydratase H4J00_RS08695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H4J00_RS08710 PF03544 Gram-negative bacterial TonB protein C-terminal H4J00_RS08715 PF02403 Seryl-tRNA synthetase N-terminal domain H4J00_RS08715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H4J00_RS08720 PF02525 Flavodoxin-like fold H4J00_RS08725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS08725 PF03466 LysR substrate binding domain H4J00_RS08765 PF05598 Transposase domain (DUF772) H4J00_RS08765 PF01609 Transposase DDE domain H4J00_RS08785 PF03377 TAL effector repeat H4J00_RS08800 PF02203 Tar ligand binding domain homologue H4J00_RS08800 PF00672 HAMP domain H4J00_RS08800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS08815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H4J00_RS08815 PF00072 Response regulator receiver domain H4J00_RS08815 PF00672 HAMP domain H4J00_RS08815 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS08815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS08815 PF01627 Hpt domain H4J00_RS08820 PF06745 KaiC H4J00_RS08835 PF03918 Cytochrome C biogenesis protein H4J00_RS08840 PF08534 Redoxin H4J00_RS08845 PF01578 Cytochrome C assembly protein H4J00_RS08845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H4J00_RS08850 PF03100 CcmE H4J00_RS08855 PF04995 Heme exporter protein D (CcmD) H4J00_RS08860 PF01578 Cytochrome C assembly protein H4J00_RS08865 PF00082 Subtilase family H4J00_RS08875 PF04542 Sigma-70 region 2 H4J00_RS08875 PF08281 Sigma-70, region 4 H4J00_RS08885 PF00034 Cytochrome c H4J00_RS08900 PF05523 WxcM-like, C-terminal H4J00_RS08920 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H4J00_RS08925 PF01943 Polysaccharide biosynthesis protein H4J00_RS08930 PF00535 Glycosyl transferase family 2 H4J00_RS08945 PF08241 Methyltransferase domain H4J00_RS08965 PF00534 Glycosyl transferases group 1 H4J00_RS08965 PF13579 Glycosyl transferase 4-like domain H4J00_RS08985 PF00664 ABC transporter transmembrane region H4J00_RS08985 PF00005 ABC transporter H4J00_RS08995 PF07690 Major Facilitator Superfamily H4J00_RS09005 PF00296 Luciferase-like monooxygenase H4J00_RS09020 PF03471 Transporter associated domain H4J00_RS09020 PF00571 CBS domain H4J00_RS09020 PF01595 Cyclin M transmembrane N-terminal domain H4J00_RS09030 PF01384 Phosphate transporter family H4J00_RS09045 PF00204 DNA gyrase B H4J00_RS09045 PF00986 DNA gyrase B subunit, carboxyl terminus H4J00_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS09045 PF01751 Toprim domain H4J00_RS09055 PF00117 Glutamine amidotransferase class-I H4J00_RS09055 PF06418 CTP synthase N-terminus H4J00_RS09060 PF00793 DAHP synthetase I family H4J00_RS09070 PF03952 Enolase, N-terminal domain H4J00_RS09070 PF00113 Enolase, C-terminal TIM barrel domain H4J00_RS09075 PF04977 Septum formation initiator H4J00_RS09080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H4J00_RS09090 PF02542 YgbB family H4J00_RS09095 PF01142 tRNA pseudouridine synthase D (TruD) H4J00_RS09105 PF01975 Survival protein SurE H4J00_RS09115 PF09335 SNARE associated Golgi protein H4J00_RS09120 PF01551 Peptidase family M23 H4J00_RS09120 PF01476 LysM domain H4J00_RS09130 PF01985 CRS1 / YhbY (CRM) domain H4J00_RS09135 PF01728 FtsJ-like methyltransferase H4J00_RS09140 PF17862 AAA+ lid domain H4J00_RS09140 PF06480 FtsH Extracellular H4J00_RS09140 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS09140 PF01434 Peptidase family M41 H4J00_RS09145 PF00809 Pterin binding enzyme H4J00_RS09155 PF17209 Hfq protein H4J00_RS09160 PF01926 50S ribosome-binding GTPase H4J00_RS09160 PF13167 GTP-binding GTPase N-terminal H4J00_RS09160 PF16360 GTP-binding GTPase Middle Region H4J00_RS09165 PF02464 Competence-damaged protein H4J00_RS09170 PF03109 ABC1 family H4J00_RS09175 PF01726 LexA DNA binding domain H4J00_RS09175 PF00717 Peptidase S24-like H4J00_RS09180 PF00154 recA bacterial DNA recombination protein H4J00_RS09185 PF02631 RecX family H4J00_RS09190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H4J00_RS09190 PF01411 tRNA synthetases class II (A) H4J00_RS09190 PF02272 DHHA1 domain H4J00_RS09195 PF02599 Global regulator protein family H4J00_RS09220 PF08460 Bacterial SH3 domain H4J00_RS09220 PF01551 Peptidase family M23 H4J00_RS09225 PF01979 Amidohydrolase family H4J00_RS09230 PF01809 Putative membrane protein insertion efficiency factor H4J00_RS09235 PF01258 Prokaryotic dksA/traR C4-type zinc finger H4J00_RS09255 PF02657 Fe-S metabolism associated domain H4J00_RS09260 PF09190 DALR domain H4J00_RS09260 PF01406 tRNA synthetases class I (C) catalytic domain H4J00_RS09270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H4J00_RS09270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H4J00_RS09275 PF00764 Arginosuccinate synthase H4J00_RS09285 PF07687 Peptidase dimerisation domain H4J00_RS09285 PF01546 Peptidase family M20/M25/M40 H4J00_RS09290 PF00696 Amino acid kinase family H4J00_RS09290 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase H4J00_RS09300 PF01118 Semialdehyde dehydrogenase, NAD binding domain H4J00_RS09305 PF00206 Lyase H4J00_RS09320 PF00696 Amino acid kinase family H4J00_RS09320 PF01472 PUA domain H4J00_RS09325 PF00171 Aldehyde dehydrogenase family H4J00_RS09330 PF02129 X-Pro dipeptidyl-peptidase (S15 family) H4J00_RS09330 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain H4J00_RS09360 PF00005 ABC transporter H4J00_RS09360 PF00664 ABC transporter transmembrane region H4J00_RS09365 PF00005 ABC transporter H4J00_RS09365 PF00664 ABC transporter transmembrane region H4J00_RS09380 PF00561 alpha/beta hydrolase fold H4J00_RS09390 PF03918 Cytochrome C biogenesis protein H4J00_RS09395 PF08534 Redoxin H4J00_RS09400 PF01578 Cytochrome C assembly protein H4J00_RS09400 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H4J00_RS09405 PF03100 CcmE H4J00_RS09415 PF01578 Cytochrome C assembly protein H4J00_RS09420 PF03379 CcmB protein H4J00_RS09425 PF00005 ABC transporter H4J00_RS09430 PF00155 Aminotransferase class I and II H4J00_RS09435 PF00795 Carbon-nitrogen hydrolase H4J00_RS09450 PF00849 RNA pseudouridylate synthase H4J00_RS09450 PF01479 S4 domain H4J00_RS09455 PF04079 Segregation and condensation complex subunit ScpB H4J00_RS09460 PF02616 Segregation and condensation protein ScpA H4J00_RS09465 PF03795 YCII-related domain H4J00_RS09475 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS09495 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS09500 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS09525 PF00795 Carbon-nitrogen hydrolase H4J00_RS09535 PF04371 Porphyromonas-type peptidyl-arginine deiminase H4J00_RS09545 PF00444 Ribosomal protein L36 H4J00_RS09550 PF02224 Cytidylate kinase H4J00_RS09555 PF00575 S1 RNA binding domain H4J00_RS09560 PF00216 Bacterial DNA-binding protein H4J00_RS09570 PF18073 Rubredoxin metal binding domain H4J00_RS09575 PF00953 Glycosyl transferase family 4 H4J00_RS09580 PF02719 Polysaccharide biosynthesis protein H4J00_RS09585 PF00483 Nucleotidyl transferase H4J00_RS09605 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H4J00_RS09605 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H4J00_RS09610 PF00478 IMP dehydrogenase / GMP reductase domain H4J00_RS09610 PF00571 CBS domain H4J00_RS09615 PF00958 GMP synthase C terminal domain H4J00_RS09615 PF00117 Glutamine amidotransferase class-I H4J00_RS09615 PF02540 NAD synthase H4J00_RS09620 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) H4J00_RS09625 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H4J00_RS09625 PF00361 Proton-conducting membrane transporter H4J00_RS09625 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus H4J00_RS09630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS09630 PF03466 LysR substrate binding domain H4J00_RS09640 PF00106 short chain dehydrogenase H4J00_RS09650 PF03601 Conserved hypothetical protein 698 H4J00_RS09675 PF01566 Natural resistance-associated macrophage protein H4J00_RS09680 PF02742 Iron dependent repressor, metal binding and dimerisation domain H4J00_RS09680 PF01325 Iron dependent repressor, N-terminal DNA binding domain H4J00_RS09685 PF14437 MafB19-like deaminase H4J00_RS09690 PF00929 Exonuclease H4J00_RS09695 PF00924 Mechanosensitive ion channel H4J00_RS09695 PF05552 Conserved TM helix H4J00_RS09700 PF00391 PEP-utilising enzyme, mobile domain H4J00_RS09700 PF02896 PEP-utilising enzyme, TIM barrel domain H4J00_RS09700 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H4J00_RS09705 PF03618 Kinase/pyrophosphorylase H4J00_RS09725 PF01066 CDP-alcohol phosphatidyltransferase H4J00_RS09735 PF00561 alpha/beta hydrolase fold H4J00_RS09750 PF01266 FAD dependent oxidoreductase H4J00_RS09750 PF00355 Rieske [2Fe-2S] domain H4J00_RS09760 PF17674 HHH domain H4J00_RS09760 PF00575 S1 RNA binding domain H4J00_RS09760 PF09371 Tex-like protein N-terminal domain H4J00_RS09760 PF16921 Tex protein YqgF-like domain H4J00_RS09770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS09770 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS09770 PF09308 LuxQ, periplasmic H4J00_RS09770 PF00072 Response regulator receiver domain H4J00_RS09860 PF00034 Cytochrome c H4J00_RS09870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS09875 PF00873 AcrB/AcrD/AcrF family H4J00_RS09880 PF00873 AcrB/AcrD/AcrF family H4J00_RS09885 PF01609 Transposase DDE domain H4J00_RS09885 PF05598 Transposase domain (DUF772) H4J00_RS09890 PF01081 KDPG and KHG aldolase H4J00_RS09895 PF00920 Dehydratase family H4J00_RS09900 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H4J00_RS09905 PF02685 Glucokinase H4J00_RS09910 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H4J00_RS09910 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H4J00_RS09915 PF17912 MalK OB fold domain H4J00_RS09915 PF00005 ABC transporter H4J00_RS09925 PF01571 Aminomethyltransferase folate-binding domain H4J00_RS09935 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H4J00_RS09940 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H4J00_RS09945 PF00890 FAD binding domain H4J00_RS09945 PF02910 Fumarate reductase flavoprotein C-term H4J00_RS09955 PF13085 2Fe-2S iron-sulfur cluster binding domain H4J00_RS09960 PF03937 Flavinator of succinate dehydrogenase H4J00_RS09970 PF02687 FtsX-like permease family H4J00_RS09970 PF12704 MacB-like periplasmic core domain H4J00_RS09975 PF00005 ABC transporter H4J00_RS09990 PF01618 MotA/TolQ/ExbB proton channel family H4J00_RS10000 PF00005 ABC transporter H4J00_RS10000 PF00664 ABC transporter transmembrane region H4J00_RS10005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H4J00_RS10010 PF02348 Cytidylyltransferase H4J00_RS10015 PF01451 Low molecular weight phosphotyrosine protein phosphatase H4J00_RS10025 PF08459 UvrC Helix-hairpin-helix N-terminal H4J00_RS10025 PF01541 GIY-YIG catalytic domain H4J00_RS10025 PF02151 UvrB/uvrC motif H4J00_RS10030 PF01066 CDP-alcohol phosphatidyltransferase H4J00_RS10050 PF00589 Phage integrase family H4J00_RS10050 PF13356 Arm DNA-binding domain H4J00_RS10060 PF13936 Helix-turn-helix domain H4J00_RS10060 PF00665 Integrase core domain H4J00_RS10085 PF05598 Transposase domain (DUF772) H4J00_RS10085 PF01609 Transposase DDE domain H4J00_RS10105 PF00501 AMP-binding enzyme H4J00_RS10105 PF13193 AMP-binding enzyme C-terminal domain H4J00_RS10105 PF00668 Condensation domain H4J00_RS10105 PF00550 Phosphopantetheine attachment site H4J00_RS10105 PF00975 Thioesterase domain H4J00_RS10110 PF00501 AMP-binding enzyme H4J00_RS10110 PF13193 AMP-binding enzyme C-terminal domain H4J00_RS10110 PF00668 Condensation domain H4J00_RS10110 PF00550 Phosphopantetheine attachment site H4J00_RS10115 PF17837 4'-phosphopantetheinyl transferase N-terminal domain H4J00_RS10115 PF01648 4'-phosphopantetheinyl transferase superfamily H4J00_RS10125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H4J00_RS10125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H4J00_RS10125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H4J00_RS10135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H4J00_RS10145 PF00581 Rhodanese-like domain H4J00_RS10145 PF17773 UPF0176 acylphosphatase like domain H4J00_RS10150 PF00072 Response regulator receiver domain H4J00_RS10150 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS10155 PF12111 Polyribonucleotide phosphorylase C terminal H4J00_RS10155 PF10150 Ribonuclease E/G family H4J00_RS10155 PF00575 S1 RNA binding domain H4J00_RS10160 PF01479 S4 domain H4J00_RS10160 PF00849 RNA pseudouridylate synthase H4J00_RS10165 PF11737 Protein of unknown function (DUF3300) H4J00_RS10180 PF01329 Pterin 4 alpha carbinolamine dehydratase H4J00_RS10185 PF01106 NifU-like domain H4J00_RS10240 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS10240 PF06715 Gp5 C-terminal repeat (3 copies) H4J00_RS10245 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H4J00_RS10250 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H4J00_RS10255 PF05638 Type VI secretion system effector, Hcp H4J00_RS10260 PF07024 ImpE protein H4J00_RS10265 PF04965 Gene 25-like lysozyme H4J00_RS10270 PF05947 Type VI secretion system, TssF H4J00_RS10280 PF07724 AAA domain (Cdc48 subfamily) H4J00_RS10280 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS10280 PF17871 AAA lid domain H4J00_RS10280 PF10431 C-terminal, D2-small domain, of ClpB protein H4J00_RS10305 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS10305 PF06715 Gp5 C-terminal repeat (3 copies) H4J00_RS10320 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H4J00_RS10330 PF06761 Intracellular multiplication and human macrophage-killing H4J00_RS10330 PF14331 ImcF-related N-terminal domain H4J00_RS10330 PF06744 Type VI secretion protein IcmF C-terminal H4J00_RS10345 PF00069 Protein kinase domain H4J00_RS10360 PF06812 ImpA, N-terminal, type VI secretion system H4J00_RS10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS10365 PF03466 LysR substrate binding domain H4J00_RS10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS10370 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS10375 PF03150 Di-haem cytochrome c peroxidase H4J00_RS10375 PF00034 Cytochrome c H4J00_RS10380 PF00072 Response regulator receiver domain H4J00_RS10380 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS10430 PF00529 HlyD membrane-fusion protein of T1SS H4J00_RS10430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS10435 PF00873 AcrB/AcrD/AcrF family H4J00_RS10510 PF03377 TAL effector repeat H4J00_RS10515 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS10545 PF03377 TAL effector repeat H4J00_RS10560 PF00082 Subtilase family H4J00_RS10560 PF03797 Autotransporter beta-domain H4J00_RS10565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS10570 PF00873 AcrB/AcrD/AcrF family H4J00_RS10575 PF02321 Outer membrane efflux protein H4J00_RS10580 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS10580 PF08448 PAS fold H4J00_RS10580 PF13426 PAS domain H4J00_RS10580 PF00072 Response regulator receiver domain H4J00_RS10580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS10585 PF00072 Response regulator receiver domain H4J00_RS10585 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS10590 PF12951 Passenger-associated-transport-repeat H4J00_RS10595 PF08447 PAS fold H4J00_RS10595 PF08448 PAS fold H4J00_RS10595 PF00563 EAL domain H4J00_RS10595 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS10645 PF10414 Sirohaem synthase dimerisation region H4J00_RS10645 PF14824 Sirohaem biosynthesis protein central H4J00_RS10645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4J00_RS10670 PF12804 MobA-like NTP transferase domain H4J00_RS10675 PF03454 MoeA C-terminal region (domain IV) H4J00_RS10675 PF03453 MoeA N-terminal region (domain I and II) H4J00_RS10675 PF00994 Probable molybdopterin binding domain H4J00_RS10700 PF00899 ThiF family H4J00_RS10715 PF03454 MoeA C-terminal region (domain IV) H4J00_RS10715 PF00994 Probable molybdopterin binding domain H4J00_RS10715 PF03453 MoeA N-terminal region (domain I and II) H4J00_RS10720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H4J00_RS10720 PF01926 50S ribosome-binding GTPase H4J00_RS10725 PF01011 PQQ enzyme repeat H4J00_RS10725 PF13360 PQQ-like domain H4J00_RS10735 PF13464 Domain of unknown function (DUF4115) H4J00_RS10745 PF04055 Radical SAM superfamily H4J00_RS10750 PF00334 Nucleoside diphosphate kinase H4J00_RS10760 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H4J00_RS10760 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H4J00_RS10760 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS10765 PF02803 Thiolase, C-terminal domain H4J00_RS10765 PF00108 Thiolase, N-terminal domain H4J00_RS10770 PF00654 Voltage gated chloride channel H4J00_RS10780 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H4J00_RS10790 PF12002 MgsA AAA+ ATPase C terminal H4J00_RS10790 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS10790 PF16193 AAA C-terminal domain H4J00_RS10800 PF03548 Outer membrane lipoprotein carrier protein LolA H4J00_RS10810 PF09397 Ftsk gamma domain H4J00_RS10810 PF17854 FtsK alpha domain H4J00_RS10810 PF01580 FtsK/SpoIIIE family H4J00_RS10810 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H4J00_RS10815 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS10830 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H4J00_RS10835 PF01176 Translation initiation factor 1A / IF-1 H4J00_RS10840 PF10431 C-terminal, D2-small domain, of ClpB protein H4J00_RS10840 PF02861 Clp amino terminal domain, pathogenicity island component H4J00_RS10840 PF07724 AAA domain (Cdc48 subfamily) H4J00_RS10840 PF17871 AAA lid domain H4J00_RS10840 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS10845 PF02617 ATP-dependent Clp protease adaptor protein ClpS H4J00_RS10850 PF00293 NUDIX domain H4J00_RS10860 PF04356 Protein of unknown function (DUF489) H4J00_RS10865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS10865 PF12729 Four helix bundle sensory module for signal transduction H4J00_RS10865 PF00672 HAMP domain H4J00_RS10880 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS10880 PF00563 EAL domain H4J00_RS10880 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS10885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS10885 PF07730 Histidine kinase H4J00_RS10890 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS10890 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS10890 PF00563 EAL domain H4J00_RS10895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS10895 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS10915 PF01584 CheW-like domain H4J00_RS10915 PF00072 Response regulator receiver domain H4J00_RS10925 PF00460 Flagella basal body rod protein H4J00_RS10925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4J00_RS10930 PF03963 Flagellar hook capping protein - N-terminal region H4J00_RS10935 PF07559 Flagellar basal body protein FlaE H4J00_RS10935 PF00460 Flagella basal body rod protein H4J00_RS10935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4J00_RS10940 PF00460 Flagella basal body rod protein H4J00_RS10940 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4J00_RS10945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4J00_RS10945 PF00460 Flagella basal body rod protein H4J00_RS10950 PF02107 Flagellar L-ring protein H4J00_RS10955 PF02119 Flagellar P-ring protein H4J00_RS10960 PF10135 Rod binding protein H4J00_RS10960 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H4J00_RS10965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H4J00_RS10965 PF07196 Flagellin hook IN motif H4J00_RS10975 PF00700 Bacterial flagellin C-terminal helical region H4J00_RS10975 PF00669 Bacterial flagellin N-terminal helical region H4J00_RS10980 PF02465 Flagellar hook-associated protein 2 N-terminus H4J00_RS10980 PF07195 Flagellar hook-associated protein 2 C-terminus H4J00_RS10980 PF07196 Flagellin hook IN motif H4J00_RS10985 PF02561 Flagellar protein FliS H4J00_RS11000 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS11000 PF00072 Response regulator receiver domain H4J00_RS11005 PF00309 Sigma-54 factor, Activator interacting domain (AID) H4J00_RS11005 PF04963 Sigma-54 factor, core binding domain H4J00_RS11005 PF04552 Sigma-54, DNA binding domain H4J00_RS11010 PF01339 CheB methylesterase H4J00_RS11010 PF00072 Response regulator receiver domain H4J00_RS11015 PF00158 Sigma-54 interaction domain H4J00_RS11015 PF02954 Bacterial regulatory protein, Fis family H4J00_RS11015 PF06490 Flagellar regulatory protein FleQ H4J00_RS11020 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H4J00_RS11030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H4J00_RS11030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H4J00_RS11035 PF00106 short chain dehydrogenase H4J00_RS11070 PF00535 Glycosyl transferase family 2 H4J00_RS11070 PF00534 Glycosyl transferases group 1 H4J00_RS11075 PF02049 Flagellar hook-basal body complex protein FliE H4J00_RS11080 PF08345 Flagellar M-ring protein C-terminal H4J00_RS11080 PF01514 Secretory protein of YscJ/FliF family H4J00_RS11085 PF14841 FliG middle domain H4J00_RS11085 PF01706 FliG C-terminal domain H4J00_RS11085 PF14842 FliG N-terminal domain H4J00_RS11095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4J00_RS11095 PF18269 T3SS EscN ATPase C-terminal domain H4J00_RS11115 PF02154 Flagellar motor switch protein FliM H4J00_RS11115 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H4J00_RS11120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H4J00_RS11125 PF04347 Flagellar biosynthesis protein, FliO H4J00_RS11130 PF00813 FliP family H4J00_RS11135 PF01313 Bacterial export proteins, family 3 H4J00_RS11140 PF01311 Bacterial export proteins, family 1 H4J00_RS11145 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS11150 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS11155 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS11155 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS11155 PF00563 EAL domain H4J00_RS11160 PF01312 FlhB HrpN YscU SpaS Family H4J00_RS11165 PF00771 FHIPEP family H4J00_RS11170 PF00448 SRP54-type protein, GTPase domain H4J00_RS11175 PF10609 NUBPL iron-transfer P-loop NTPase H4J00_RS11180 PF04539 Sigma-70 region 3 H4J00_RS11180 PF04542 Sigma-70 region 2 H4J00_RS11180 PF04545 Sigma-70, region 4 H4J00_RS11185 PF00072 Response regulator receiver domain H4J00_RS11190 PF04344 Chemotaxis phosphatase, CheZ H4J00_RS11195 PF01584 CheW-like domain H4J00_RS11195 PF02895 Signal transducing histidine kinase, homodimeric domain H4J00_RS11195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS11195 PF01627 Hpt domain H4J00_RS11195 PF00072 Response regulator receiver domain H4J00_RS11215 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS11215 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS11215 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS11275 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS11275 PF00593 TonB dependent receptor H4J00_RS11280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H4J00_RS11280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H4J00_RS11285 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS11290 PF00593 TonB dependent receptor H4J00_RS11290 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS11295 PF01618 MotA/TolQ/ExbB proton channel family H4J00_RS11300 PF00691 OmpA family H4J00_RS11300 PF13677 Membrane MotB of proton-channel complex MotA/MotB H4J00_RS11305 PF13614 AAA domain H4J00_RS11310 PF01584 CheW-like domain H4J00_RS11320 PF00072 Response regulator receiver domain H4J00_RS11325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS11325 PF01627 Hpt domain H4J00_RS11325 PF02895 Signal transducing histidine kinase, homodimeric domain H4J00_RS11325 PF01584 CheW-like domain H4J00_RS11325 PF09078 CheY binding H4J00_RS11330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11330 PF02203 Tar ligand binding domain homologue H4J00_RS11330 PF00672 HAMP domain H4J00_RS11355 PF00672 HAMP domain H4J00_RS11355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11355 PF02203 Tar ligand binding domain homologue H4J00_RS11360 PF02203 Tar ligand binding domain homologue H4J00_RS11360 PF00672 HAMP domain H4J00_RS11360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11365 PF02203 Tar ligand binding domain homologue H4J00_RS11365 PF00672 HAMP domain H4J00_RS11365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11375 PF02203 Tar ligand binding domain homologue H4J00_RS11375 PF00672 HAMP domain H4J00_RS11380 PF02203 Tar ligand binding domain homologue H4J00_RS11380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11380 PF00672 HAMP domain H4J00_RS11385 PF00672 HAMP domain H4J00_RS11385 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11385 PF02203 Tar ligand binding domain homologue H4J00_RS11390 PF00672 HAMP domain H4J00_RS11390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11390 PF02203 Tar ligand binding domain homologue H4J00_RS11395 PF02203 Tar ligand binding domain homologue H4J00_RS11395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11395 PF00672 HAMP domain H4J00_RS11405 PF07238 PilZ domain H4J00_RS11405 PF07317 Flagellar regulator YcgR H4J00_RS11410 PF01584 CheW-like domain H4J00_RS11420 PF00672 HAMP domain H4J00_RS11420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS11420 PF02203 Tar ligand binding domain homologue H4J00_RS11425 PF01739 CheR methyltransferase, SAM binding domain H4J00_RS11425 PF03705 CheR methyltransferase, all-alpha domain H4J00_RS11430 PF03975 CheD chemotactic sensory transduction H4J00_RS11435 PF01339 CheB methylesterase H4J00_RS11435 PF00072 Response regulator receiver domain H4J00_RS11440 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS11440 PF00563 EAL domain H4J00_RS11440 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS11450 PF00561 alpha/beta hydrolase fold H4J00_RS11455 PF06434 Aconitate hydratase 2 N-terminus H4J00_RS11455 PF11791 Aconitate B N-terminal domain H4J00_RS11455 PF00330 Aconitase family (aconitate hydratase) H4J00_RS11470 PF00330 Aconitase family (aconitate hydratase) H4J00_RS11470 PF00694 Aconitase C-terminal domain H4J00_RS11480 PF00501 AMP-binding enzyme H4J00_RS11480 PF13193 AMP-binding enzyme C-terminal domain H4J00_RS11485 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS11490 PF00072 Response regulator receiver domain H4J00_RS11490 PF01627 Hpt domain H4J00_RS11490 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS11490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS11495 PF00072 Response regulator receiver domain H4J00_RS11500 PF01336 OB-fold nucleic acid binding domain H4J00_RS11500 PF00152 tRNA synthetases class II (D, K and N) H4J00_RS11525 PF17768 RecJ OB domain H4J00_RS11525 PF02272 DHHA1 domain H4J00_RS11525 PF01368 DHH family H4J00_RS11535 PF01272 Transcription elongation factor, GreA/GreB, C-term H4J00_RS11535 PF03449 Transcription elongation factor, N-terminal H4J00_RS11540 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H4J00_RS11540 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H4J00_RS11540 PF02142 MGS-like domain H4J00_RS11550 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H4J00_RS11550 PF00117 Glutamine amidotransferase class-I H4J00_RS11555 PF05173 Dihydrodipicolinate reductase, C-terminus H4J00_RS11555 PF01113 Dihydrodipicolinate reductase, N-terminus H4J00_RS11560 PF03473 MOSC domain H4J00_RS11560 PF03475 3-alpha domain H4J00_RS11565 PF00155 Aminotransferase class I and II H4J00_RS11580 PF07664 Ferrous iron transport protein B C terminus H4J00_RS11580 PF07670 Nucleoside recognition H4J00_RS11580 PF02421 Ferrous iron transport protein B H4J00_RS11590 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS11600 PF00682 HMGL-like H4J00_RS11605 PF00106 short chain dehydrogenase H4J00_RS11610 PF09285 Elongation factor P, C-terminal H4J00_RS11610 PF08207 Elongation factor P (EF-P) KOW-like domain H4J00_RS11610 PF01132 Elongation factor P (EF-P) OB domain H4J00_RS11630 PF01565 FAD binding domain H4J00_RS11630 PF02913 FAD linked oxidases, C-terminal domain H4J00_RS11635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H4J00_RS11635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H4J00_RS11645 PF13520 Amino acid permease H4J00_RS11650 PF13520 Amino acid permease H4J00_RS11655 PF00596 Class II Aldolase and Adducin N-terminal domain H4J00_RS11660 PF03079 ARD/ARD' family H4J00_RS11680 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H4J00_RS11680 PF01502 Phosphoribosyl-AMP cyclohydrolase H4J00_RS11685 PF00977 Histidine biosynthesis protein H4J00_RS11690 PF00977 Histidine biosynthesis protein H4J00_RS11695 PF00117 Glutamine amidotransferase class-I H4J00_RS11700 PF00475 Imidazoleglycerol-phosphate dehydratase H4J00_RS11705 PF00155 Aminotransferase class I and II H4J00_RS11710 PF00815 Histidinol dehydrogenase H4J00_RS11715 PF01634 ATP phosphoribosyltransferase H4J00_RS11715 PF08029 HisG, C-terminal domain H4J00_RS11730 PF13393 Histidyl-tRNA synthetase H4J00_RS11730 PF03129 Anticodon binding domain H4J00_RS11740 PF13545 Crp-like helix-turn-helix domain H4J00_RS11740 PF00027 Cyclic nucleotide-binding domain H4J00_RS11750 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS11750 PF14821 Threonine synthase N terminus H4J00_RS11765 PF13276 HTH-like domain H4J00_RS11765 PF13683 Integrase core domain H4J00_RS11785 PF00288 GHMP kinases N terminal domain H4J00_RS11785 PF08544 GHMP kinases C terminal H4J00_RS11790 PF03447 Homoserine dehydrogenase, NAD binding domain H4J00_RS11790 PF01842 ACT domain H4J00_RS11790 PF13840 ACT domain H4J00_RS11790 PF00742 Homoserine dehydrogenase H4J00_RS11790 PF00696 Amino acid kinase family H4J00_RS11805 PF00171 Aldehyde dehydrogenase family H4J00_RS11825 PF01180 Dihydroorotate dehydrogenase H4J00_RS11830 PF01565 FAD binding domain H4J00_RS11830 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H4J00_RS11835 PF00892 EamA-like transporter family H4J00_RS11845 PF07690 Major Facilitator Superfamily H4J00_RS11855 PF01569 PAP2 superfamily H4J00_RS11860 PF04551 GcpE protein H4J00_RS11870 PF00072 Response regulator receiver domain H4J00_RS11875 PF02013 Cellulose or protein binding domain H4J00_RS11875 PF00150 Cellulase (glycosyl hydrolase family 5) H4J00_RS11885 PF00360 Phytochrome region H4J00_RS11885 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS11885 PF00563 EAL domain H4J00_RS11885 PF01590 GAF domain H4J00_RS11895 PF00474 Sodium:solute symporter family H4J00_RS11900 PF14310 Fibronectin type III-like domain H4J00_RS11900 PF00933 Glycosyl hydrolase family 3 N terminal domain H4J00_RS11900 PF01915 Glycosyl hydrolase family 3 C-terminal domain H4J00_RS11920 PF00342 Phosphoglucose isomerase H4J00_RS11925 PF02261 Aspartate decarboxylase H4J00_RS11930 PF02569 Pantoate-beta-alanine ligase H4J00_RS11935 PF02548 Ketopantoate hydroxymethyltransferase H4J00_RS11940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H4J00_RS11945 PF01743 Poly A polymerase head domain H4J00_RS11945 PF12627 Probable RNA and SrmB- binding site of polymerase A H4J00_RS11945 PF12626 Polymerase A arginine-rich C-terminus H4J00_RS11955 PF02649 Type I GTP cyclohydrolase folE2 H4J00_RS11960 PF01520 N-acetylmuramoyl-L-alanine amidase H4J00_RS11970 PF00083 Sugar (and other) transporter H4J00_RS11980 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H4J00_RS11980 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H4J00_RS12000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS12000 PF03466 LysR substrate binding domain H4J00_RS12005 PF01081 KDPG and KHG aldolase H4J00_RS12010 PF13378 Enolase C-terminal domain-like H4J00_RS12010 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4J00_RS12015 PF08450 SMP-30/Gluconolactonase/LRE-like region H4J00_RS12020 PF05035 2-keto-3-deoxy-galactonokinase H4J00_RS12025 PF11953 Domain of unknown function (DUF3470) H4J00_RS12025 PF00037 4Fe-4S binding domain H4J00_RS12035 PF00701 Dihydrodipicolinate synthetase family H4J00_RS12050 PF00578 AhpC/TSA family H4J00_RS12055 PF02562 PhoH-like protein H4J00_RS12055 PF13638 PIN domain H4J00_RS12065 PF08543 Phosphomethylpyrimidine kinase H4J00_RS12065 PF02581 Thiamine monophosphate synthase H4J00_RS12090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS12090 PF03466 LysR substrate binding domain H4J00_RS12095 PF02678 Pirin H4J00_RS12095 PF17954 Quercetinase C-terminal cupin domain H4J00_RS12120 PF00295 Glycosyl hydrolases family 28 H4J00_RS12135 PF13419 Haloacid dehalogenase-like hydrolase H4J00_RS12145 PF01979 Amidohydrolase family H4J00_RS12155 PF09285 Elongation factor P, C-terminal H4J00_RS12155 PF08207 Elongation factor P (EF-P) KOW-like domain H4J00_RS12155 PF01132 Elongation factor P (EF-P) OB domain H4J00_RS12160 PF04055 Radical SAM superfamily H4J00_RS12165 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS12165 PF13188 PAS domain H4J00_RS12165 PF00563 EAL domain H4J00_RS12165 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS12175 PF00588 SpoU rRNA Methylase family H4J00_RS12180 PF00459 Inositol monophosphatase family H4J00_RS12185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H4J00_RS12185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H4J00_RS12190 PF00545 ribonuclease H4J00_RS12210 PF12848 ABC transporter H4J00_RS12210 PF16326 ABC transporter C-terminal domain H4J00_RS12210 PF00005 ABC transporter H4J00_RS12215 PF03880 DbpA RNA binding domain H4J00_RS12215 PF00270 DEAD/DEAH box helicase H4J00_RS12215 PF00271 Helicase conserved C-terminal domain H4J00_RS12220 PF00156 Phosphoribosyl transferase domain H4J00_RS12225 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H4J00_RS12235 PF02798 Glutathione S-transferase, N-terminal domain H4J00_RS12235 PF14497 Glutathione S-transferase, C-terminal domain H4J00_RS12240 PF00313 'Cold-shock' DNA-binding domain H4J00_RS12245 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H4J00_RS12250 PF07152 YaeQ protein H4J00_RS12260 PF00563 EAL domain H4J00_RS12260 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS12260 PF00072 Response regulator receiver domain H4J00_RS12265 PF01435 Peptidase family M48 H4J00_RS12270 PF00749 tRNA synthetases class I (E and Q), catalytic domain H4J00_RS12275 PF00106 short chain dehydrogenase H4J00_RS12280 PF05233 PHB accumulation regulatory domain H4J00_RS12280 PF07879 PHB/PHA accumulation regulator DNA-binding domain H4J00_RS12295 PF08676 MutL C terminal dimerisation domain H4J00_RS12295 PF01119 DNA mismatch repair protein, C-terminal domain H4J00_RS12300 PF01520 N-acetylmuramoyl-L-alanine amidase H4J00_RS12300 PF11741 AMIN domain H4J00_RS12305 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H4J00_RS12310 PF03853 YjeF-related protein N-terminus H4J00_RS12310 PF01256 Carbohydrate kinase H4J00_RS12315 PF08331 Domain of unknown function (DUF1730) H4J00_RS12320 PF13742 OB-fold nucleic acid binding domain H4J00_RS12320 PF02601 Exonuclease VII, large subunit H4J00_RS12335 PF03781 Sulfatase-modifying factor enzyme 1 H4J00_RS12345 PF01612 3'-5' exonuclease H4J00_RS12345 PF00570 HRDC domain H4J00_RS12400 PF00291 Pyridoxal-phosphate dependent enzyme H4J00_RS12430 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase H4J00_RS12455 PF03328 HpcH/HpaI aldolase/citrate lyase family H4J00_RS12510 PF01584 CheW-like domain H4J00_RS12515 PF02743 Cache domain H4J00_RS12515 PF00672 HAMP domain H4J00_RS12515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS12540 PF04386 Stringent starvation protein B H4J00_RS12545 PF00043 Glutathione S-transferase, C-terminal domain H4J00_RS12545 PF02798 Glutathione S-transferase, N-terminal domain H4J00_RS12550 PF02167 Cytochrome C1 family H4J00_RS12555 PF00032 Cytochrome b(C-terminal)/b6/petD H4J00_RS12555 PF00033 Cytochrome b/b6/petB H4J00_RS12560 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H4J00_RS12560 PF00355 Rieske [2Fe-2S] domain H4J00_RS12565 PF01464 Transglycosylase SLT domain H4J00_RS12585 PF04055 Radical SAM superfamily H4J00_RS12585 PF01938 TRAM domain H4J00_RS12585 PF00919 Uncharacterized protein family UPF0004 H4J00_RS12590 PF02562 PhoH-like protein H4J00_RS12600 PF02130 Uncharacterized protein family UPF0054 H4J00_RS12610 PF03471 Transporter associated domain H4J00_RS12610 PF00571 CBS domain H4J00_RS12625 PF00171 Aldehyde dehydrogenase family H4J00_RS12630 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS12635 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS12645 PF00005 ABC transporter H4J00_RS12645 PF08402 TOBE domain H4J00_RS12650 PF02321 Outer membrane efflux protein H4J00_RS12655 PF07690 Major Facilitator Superfamily H4J00_RS12660 PF13533 Biotin-lipoyl like H4J00_RS12665 PF13416 Bacterial extracellular solute-binding protein H4J00_RS12670 PF00202 Aminotransferase class-III H4J00_RS12685 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS12690 PF03377 TAL effector repeat H4J00_RS12700 PF03377 TAL effector repeat H4J00_RS12715 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS12715 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS12715 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS12760 PF00120 Glutamine synthetase, catalytic domain H4J00_RS12765 PF07722 Peptidase C26 H4J00_RS12770 PF00120 Glutamine synthetase, catalytic domain H4J00_RS12775 PF01266 FAD dependent oxidoreductase H4J00_RS12780 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS12780 PF00072 Response regulator receiver domain H4J00_RS12785 PF07690 Major Facilitator Superfamily H4J00_RS12785 PF00083 Sugar (and other) transporter H4J00_RS12795 PF00384 Molybdopterin oxidoreductase H4J00_RS12800 PF02634 FdhD/NarQ family H4J00_RS12815 PF00202 Aminotransferase class-III H4J00_RS12820 PF00005 ABC transporter H4J00_RS12830 PF04286 Protein of unknown function (DUF445) H4J00_RS12835 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H4J00_RS12835 PF00072 Response regulator receiver domain H4J00_RS12835 PF00672 HAMP domain H4J00_RS12835 PF01627 Hpt domain H4J00_RS12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS12835 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS12840 PF00072 Response regulator receiver domain H4J00_RS12850 PF07690 Major Facilitator Superfamily H4J00_RS12860 PF05088 Bacterial NAD-glutamate dehydrogenase H4J00_RS12870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS12870 PF00529 HlyD membrane-fusion protein of T1SS H4J00_RS12875 PF00873 AcrB/AcrD/AcrF family H4J00_RS12880 PF01609 Transposase DDE domain H4J00_RS12880 PF13006 Insertion element 4 transposase N-terminal H4J00_RS12885 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS12890 PF05524 PEP-utilising enzyme, N-terminal H4J00_RS12890 PF00391 PEP-utilising enzyme, mobile domain H4J00_RS12890 PF00381 PTS HPr component phosphorylation site H4J00_RS12890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H4J00_RS12890 PF02896 PEP-utilising enzyme, TIM barrel domain H4J00_RS12895 PF00294 pfkB family carbohydrate kinase H4J00_RS12900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H4J00_RS12910 PF01609 Transposase DDE domain H4J00_RS12910 PF05598 Transposase domain (DUF772) H4J00_RS12915 PF01593 Flavin containing amine oxidoreductase H4J00_RS12950 PF02355 Protein export membrane protein H4J00_RS12950 PF07549 SecD/SecF GG Motif H4J00_RS12955 PF07549 SecD/SecF GG Motif H4J00_RS12955 PF13721 SecD export protein N-terminal TM region H4J00_RS12955 PF02355 Protein export membrane protein H4J00_RS12960 PF02699 Preprotein translocase subunit H4J00_RS12965 PF01702 Queuine tRNA-ribosyltransferase H4J00_RS12970 PF02547 Queuosine biosynthesis protein H4J00_RS13025 PF00037 4Fe-4S binding domain H4J00_RS13035 PF01467 Cytidylyltransferase-like H4J00_RS13045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS13045 PF00183 Hsp90 protein H4J00_RS13075 PF04616 Glycosyl hydrolases family 43 H4J00_RS13080 PF07532 Bacterial Ig-like domain (group 4) H4J00_RS13085 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS13085 PF00593 TonB dependent receptor H4J00_RS13095 PF00082 Subtilase family H4J00_RS13095 PF09286 Pro-kumamolisin, activation domain H4J00_RS13115 PF13520 Amino acid permease H4J00_RS13130 PF01321 Creatinase/Prolidase N-terminal domain H4J00_RS13130 PF00557 Metallopeptidase family M24 H4J00_RS13135 PF00171 Aldehyde dehydrogenase family H4J00_RS13140 PF00701 Dihydrodipicolinate synthetase family H4J00_RS13145 PF04324 BFD-like [2Fe-2S] binding domain H4J00_RS13145 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS13155 PF01266 FAD dependent oxidoreductase H4J00_RS13160 PF05544 Proline racemase H4J00_RS13170 PF00448 SRP54-type protein, GTPase domain H4J00_RS13170 PF02881 SRP54-type protein, helical bundle domain H4J00_RS13180 PF10576 Iron-sulfur binding domain of endonuclease III H4J00_RS13180 PF00730 HhH-GPD superfamily base excision DNA repair protein H4J00_RS13180 PF14815 NUDIX domain H4J00_RS13180 PF00633 Helix-hairpin-helix motif H4J00_RS13185 PF04362 Bacterial Fe(2+) trafficking H4J00_RS13190 PF00072 Response regulator receiver domain H4J00_RS13190 PF13426 PAS domain H4J00_RS13190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS13215 PF08212 Lipocalin-like domain H4J00_RS13225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4J00_RS13225 PF12806 Acetyl-CoA dehydrogenase C-terminal like H4J00_RS13225 PF02770 Acyl-CoA dehydrogenase, middle domain H4J00_RS13225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4J00_RS13235 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H4J00_RS13235 PF02779 Transketolase, pyrimidine binding domain H4J00_RS13235 PF02780 Transketolase, C-terminal domain H4J00_RS13255 PF03808 Glycosyl transferase WecB/TagA/CpsF family H4J00_RS13270 PF14667 Polysaccharide biosynthesis C-terminal domain H4J00_RS13280 PF00534 Glycosyl transferases group 1 H4J00_RS13280 PF13439 Glycosyltransferase Family 4 H4J00_RS13300 PF02397 Bacterial sugar transferase H4J00_RS13320 PF13411 MerR HTH family regulatory protein H4J00_RS13325 PF00216 Bacterial DNA-binding protein H4J00_RS13330 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H4J00_RS13330 PF03147 Ferredoxin-fold anticodon binding domain H4J00_RS13330 PF03484 tRNA synthetase B5 domain H4J00_RS13330 PF03483 B3/4 domain H4J00_RS13330 PF01588 Putative tRNA binding domain H4J00_RS13335 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H4J00_RS13335 PF01409 tRNA synthetases class II core domain (F) H4J00_RS13340 PF00453 Ribosomal protein L20 H4J00_RS13345 PF01632 Ribosomal protein L35 H4J00_RS13350 PF00707 Translation initiation factor IF-3, C-terminal domain H4J00_RS13350 PF05198 Translation initiation factor IF-3, N-terminal domain H4J00_RS13355 PF03129 Anticodon binding domain H4J00_RS13355 PF02824 TGS domain H4J00_RS13355 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H4J00_RS13355 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H4J00_RS13370 PF03989 DNA gyrase C-terminal domain, beta-propeller H4J00_RS13370 PF00521 DNA gyrase/topoisomerase IV, subunit A H4J00_RS13375 PF01008 Initiation factor 2 subunit family H4J00_RS13390 PF00152 tRNA synthetases class II (D, K and N) H4J00_RS13395 PF00533 BRCA1 C Terminus (BRCT) domain H4J00_RS13395 PF03120 NAD-dependent DNA ligase OB-fold domain H4J00_RS13395 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H4J00_RS13395 PF12826 Helix-hairpin-helix motif H4J00_RS13395 PF01653 NAD-dependent DNA ligase adenylation domain H4J00_RS13410 PF04354 ZipA, C-terminal FtsZ-binding domain H4J00_RS13415 PF02463 RecF/RecN/SMC N terminal domain H4J00_RS13420 PF03948 Ribosomal protein L9, C-terminal domain H4J00_RS13420 PF01281 Ribosomal protein L9, N-terminal domain H4J00_RS13425 PF01084 Ribosomal protein S18 H4J00_RS13430 PF01250 Ribosomal protein S6 H4J00_RS13435 PF01521 Iron-sulphur cluster biosynthesis H4J00_RS13440 PF00152 tRNA synthetases class II (D, K and N) H4J00_RS13440 PF01336 OB-fold nucleic acid binding domain H4J00_RS13465 PF00484 Carbonic anhydrase H4J00_RS13470 PF06052 3-hydroxyanthranilic acid dioxygenase H4J00_RS13480 PF00266 Aminotransferase class-V H4J00_RS13485 PF01494 FAD binding domain H4J00_RS13490 PF08411 Exonuclease C-terminal H4J00_RS13490 PF00929 Exonuclease H4J00_RS13500 PF00248 Aldo/keto reductase family H4J00_RS13515 PF01513 ATP-NAD kinase H4J00_RS13525 PF10672 S-adenosylmethionine-dependent methyltransferase H4J00_RS13525 PF02926 THUMP domain H4J00_RS13525 PF01170 Putative RNA methylase family UPF0020 H4J00_RS13565 PF00581 Rhodanese-like domain H4J00_RS13570 PF00293 NUDIX domain H4J00_RS13580 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H4J00_RS13580 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H4J00_RS13585 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS13595 PF10576 Iron-sulfur binding domain of endonuclease III H4J00_RS13595 PF00633 Helix-hairpin-helix motif H4J00_RS13595 PF00730 HhH-GPD superfamily base excision DNA repair protein H4J00_RS13605 PF00484 Carbonic anhydrase H4J00_RS13620 PF12849 PBP superfamily domain H4J00_RS13625 PF12849 PBP superfamily domain H4J00_RS13630 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS13635 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS13640 PF00005 ABC transporter H4J00_RS13645 PF01895 PhoU domain H4J00_RS13655 PF00929 Exonuclease H4J00_RS13665 PF00588 SpoU rRNA Methylase family H4J00_RS13665 PF08032 RNA 2'-O ribose methyltransferase substrate binding H4J00_RS13680 PF17876 Cold shock domain H4J00_RS13680 PF08461 Ribonuclease R winged-helix domain H4J00_RS13680 PF08206 Ribonuclease B OB domain H4J00_RS13680 PF00575 S1 RNA binding domain H4J00_RS13680 PF00773 RNB domain H4J00_RS13705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H4J00_RS13705 PF02770 Acyl-CoA dehydrogenase, middle domain H4J00_RS13705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H4J00_RS13710 PF01209 ubiE/COQ5 methyltransferase family H4J00_RS13730 PF00294 pfkB family carbohydrate kinase H4J00_RS13735 PF07690 Major Facilitator Superfamily H4J00_RS13740 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS13755 PF04102 SlyX H4J00_RS13760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H4J00_RS13760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H4J00_RS13760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H4J00_RS13765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H4J00_RS13765 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H4J00_RS13770 PF00255 Glutathione peroxidase H4J00_RS13780 PF00392 Bacterial regulatory proteins, gntR family H4J00_RS13785 PF00005 ABC transporter H4J00_RS13810 PF10415 Fumarase C C-terminus H4J00_RS13810 PF00206 Lyase H4J00_RS13820 PF03471 Transporter associated domain H4J00_RS13820 PF00571 CBS domain H4J00_RS13830 PF08328 Adenylosuccinate lyase C-terminal H4J00_RS13830 PF00206 Lyase H4J00_RS13850 PF08007 Cupin superfamily protein H4J00_RS13860 PF16870 2-oxoglutarate dehydrogenase C-terminal H4J00_RS13860 PF00676 Dehydrogenase E1 component H4J00_RS13860 PF16078 2-oxoglutarate dehydrogenase N-terminus H4J00_RS13860 PF02779 Transketolase, pyrimidine binding domain H4J00_RS13865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4J00_RS13865 PF00364 Biotin-requiring enzyme H4J00_RS13865 PF02817 e3 binding domain H4J00_RS13870 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS13870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4J00_RS13880 PF03641 Possible lysine decarboxylase H4J00_RS13885 PF01205 Uncharacterized protein family UPF0029 H4J00_RS13890 PF00664 ABC transporter transmembrane region H4J00_RS13890 PF00005 ABC transporter H4J00_RS13900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS13900 PF03466 LysR substrate binding domain H4J00_RS13925 PF08543 Phosphomethylpyrimidine kinase H4J00_RS13930 PF00226 DnaJ domain H4J00_RS13930 PF01556 DnaJ C terminal domain H4J00_RS13930 PF00684 DnaJ central domain H4J00_RS13935 PF00012 Hsp70 protein H4J00_RS13940 PF01025 GrpE H4J00_RS13945 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding H4J00_RS13945 PF01628 HrcA protein C terminal domain H4J00_RS13950 PF02463 RecF/RecN/SMC N terminal domain H4J00_RS13955 PF01475 Ferric uptake regulator family H4J00_RS13960 PF04355 SmpA / OmlA family H4J00_RS13965 PF03658 RnfH family Ubiquitin H4J00_RS13970 PF03364 Polyketide cyclase / dehydrase and lipid transport H4J00_RS13975 PF01668 SmpB protein H4J00_RS13980 PF00082 Subtilase family H4J00_RS14045 PF03377 TAL effector repeat H4J00_RS14050 PF03377 TAL effector repeat H4J00_RS14055 PF03377 TAL effector repeat H4J00_RS14060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H4J00_RS14060 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS14065 PF01266 FAD dependent oxidoreductase H4J00_RS14070 PF04235 Protein of unknown function (DUF418) H4J00_RS14075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H4J00_RS14080 PF00877 NlpC/P60 family H4J00_RS14085 PF00877 NlpC/P60 family H4J00_RS14105 PF00375 Sodium:dicarboxylate symporter family H4J00_RS14110 PF00245 Alkaline phosphatase H4J00_RS14115 PF01171 PP-loop family H4J00_RS14115 PF09179 TilS substrate binding domain H4J00_RS14115 PF11734 TilS substrate C-terminal domain H4J00_RS14120 PF02609 Exonuclease VII small subunit H4J00_RS14125 PF00348 Polyprenyl synthetase H4J00_RS14130 PF14521 Lysine-specific metallo-endopeptidase H4J00_RS14150 PF01523 Putative modulator of DNA gyrase H4J00_RS14155 PF04751 Protein of unknown function (DUF615) H4J00_RS14160 PF01523 Putative modulator of DNA gyrase H4J00_RS14170 PF13502 AsmA-like C-terminal region H4J00_RS14170 PF13116 Protein of unknown function H4J00_RS14175 PF10150 Ribonuclease E/G family H4J00_RS14175 PF00575 S1 RNA binding domain H4J00_RS14180 PF02545 Maf-like protein H4J00_RS14185 PF04402 Protein of unknown function (DUF541) H4J00_RS14210 PF02590 Predicted SPOUT methyltransferase H4J00_RS14230 PF01467 Cytidylyltransferase-like H4J00_RS14245 PF13603 Leucyl-tRNA synthetase, Domain 2 H4J00_RS14245 PF00133 tRNA synthetases class I (I, L, M and V) H4J00_RS14245 PF08264 Anticodon-binding domain of tRNA H4J00_RS14255 PF00085 Thioredoxin H4J00_RS14315 PF00664 ABC transporter transmembrane region H4J00_RS14315 PF00005 ABC transporter H4J00_RS14325 PF00873 AcrB/AcrD/AcrF family H4J00_RS14340 PF02321 Outer membrane efflux protein H4J00_RS14345 PF00072 Response regulator receiver domain H4J00_RS14345 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS14350 PF00672 HAMP domain H4J00_RS14350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS14350 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS14355 PF00999 Sodium/hydrogen exchanger family H4J00_RS14360 PF00144 Beta-lactamase H4J00_RS14365 PF03737 Aldolase/RraA H4J00_RS14385 PF01479 S4 domain H4J00_RS14385 PF00849 RNA pseudouridylate synthase H4J00_RS14390 PF08448 PAS fold H4J00_RS14390 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS14390 PF00563 EAL domain H4J00_RS14395 PF00271 Helicase conserved C-terminal domain H4J00_RS14395 PF00270 DEAD/DEAH box helicase H4J00_RS14395 PF03880 DbpA RNA binding domain H4J00_RS14440 PF00730 HhH-GPD superfamily base excision DNA repair protein H4J00_RS14440 PF06029 AlkA N-terminal domain H4J00_RS14445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H4J00_RS14445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H4J00_RS14455 PF00654 Voltage gated chloride channel H4J00_RS14460 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS14460 PF00107 Zinc-binding dehydrogenase H4J00_RS14475 PF00593 TonB dependent receptor H4J00_RS14475 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS14515 PF01475 Ferric uptake regulator family H4J00_RS14520 PF00749 tRNA synthetases class I (E and Q), catalytic domain H4J00_RS14530 PF00795 Carbon-nitrogen hydrolase H4J00_RS14560 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H4J00_RS14570 PF17757 UvrB interaction domain H4J00_RS14570 PF02559 CarD-like/TRCF domain H4J00_RS14570 PF00271 Helicase conserved C-terminal domain H4J00_RS14570 PF03461 TRCF domain H4J00_RS14570 PF00270 DEAD/DEAH box helicase H4J00_RS14585 PF01627 Hpt domain H4J00_RS14585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS14585 PF01584 CheW-like domain H4J00_RS14585 PF09078 CheY binding H4J00_RS14585 PF02895 Signal transducing histidine kinase, homodimeric domain H4J00_RS14590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H4J00_RS14590 PF00672 HAMP domain H4J00_RS14590 PF02203 Tar ligand binding domain homologue H4J00_RS14595 PF01584 CheW-like domain H4J00_RS14600 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS14600 PF13426 PAS domain H4J00_RS14600 PF00563 EAL domain H4J00_RS14605 PF03705 CheR methyltransferase, all-alpha domain H4J00_RS14605 PF01739 CheR methyltransferase, SAM binding domain H4J00_RS14610 PF00072 Response regulator receiver domain H4J00_RS14610 PF01339 CheB methylesterase H4J00_RS14620 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS14620 PF01471 Putative peptidoglycan binding domain H4J00_RS14630 PF03377 TAL effector repeat H4J00_RS14665 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS14665 PF01471 Putative peptidoglycan binding domain H4J00_RS14680 PF00300 Histidine phosphatase superfamily (branch 1) H4J00_RS14685 PF04493 Endonuclease V H4J00_RS14695 PF05726 Pirin C-terminal cupin domain H4J00_RS14695 PF02678 Pirin H4J00_RS14755 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS14755 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS14755 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS14785 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS14795 PF05726 Pirin C-terminal cupin domain H4J00_RS14795 PF02678 Pirin H4J00_RS14800 PF02554 Carbon starvation protein CstA H4J00_RS14800 PF13722 5TM C-terminal transporter carbon starvation CstA H4J00_RS14805 PF04328 Selenoprotein, putative H4J00_RS14860 PF13478 XdhC Rossmann domain H4J00_RS14860 PF02625 XdhC and CoxI family H4J00_RS14865 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain H4J00_RS14865 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase H4J00_RS14870 PF03450 CO dehydrogenase flavoprotein C-terminal domain H4J00_RS14870 PF00941 FAD binding domain in molybdopterin dehydrogenase H4J00_RS14875 PF00111 2Fe-2S iron-sulfur cluster binding domain H4J00_RS14875 PF01799 [2Fe-2S] binding domain H4J00_RS14875 PF10518 TAT (twin-arginine translocation) pathway signal sequence H4J00_RS14885 PF00360 Phytochrome region H4J00_RS14885 PF01590 GAF domain H4J00_RS14885 PF00563 EAL domain H4J00_RS14885 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS14890 PF00436 Single-strand binding protein family H4J00_RS14895 PF00348 Polyprenyl synthetase H4J00_RS14905 PF08245 Mur ligase middle domain H4J00_RS14920 PF00696 Amino acid kinase family H4J00_RS14920 PF01842 ACT domain H4J00_RS14930 PF02567 Phenazine biosynthesis-like protein H4J00_RS14940 PF02566 OsmC-like protein H4J00_RS14950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H4J00_RS14950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H4J00_RS14955 PF03652 Holliday junction resolvase H4J00_RS14960 PF02622 Uncharacterized ACR, COG1678 H4J00_RS14975 PF00117 Glutamine amidotransferase class-I H4J00_RS14975 PF03352 Methyladenine glycosylase H4J00_RS14975 PF00958 GMP synthase C terminal domain H4J00_RS14975 PF13673 Acetyltransferase (GNAT) domain H4J00_RS14975 PF13302 Acetyltransferase (GNAT) domain H4J00_RS14995 PF00437 Type II/IV secretion system protein H4J00_RS15000 PF00437 Type II/IV secretion system protein H4J00_RS15005 PF01168 Alanine racemase, N-terminal domain H4J00_RS15010 PF03807 NADP oxidoreductase coenzyme F420-dependent H4J00_RS15010 PF14748 Pyrroline-5-carboxylate reductase dimerisation H4J00_RS15060 PF02082 Transcriptional regulator H4J00_RS15065 PF01458 Uncharacterized protein family (UPF0051) H4J00_RS15070 PF00005 ABC transporter H4J00_RS15075 PF01458 Uncharacterized protein family (UPF0051) H4J00_RS15080 PF00266 Aminotransferase class-V H4J00_RS15090 PF00355 Rieske [2Fe-2S] domain H4J00_RS15110 PF07687 Peptidase dimerisation domain H4J00_RS15110 PF01546 Peptidase family M20/M25/M40 H4J00_RS15125 PF01636 Phosphotransferase enzyme family H4J00_RS15130 PF00483 Nucleotidyl transferase H4J00_RS15135 PF00308 Bacterial dnaA protein H4J00_RS15140 PF01594 AI-2E family transporter H4J00_RS15150 PF00586 AIR synthase related protein, N-terminal domain H4J00_RS15150 PF02769 AIR synthase related protein, C-terminal domain H4J00_RS15165 PF00551 Formyl transferase H4J00_RS15185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H4J00_RS15190 PF01722 BolA-like protein H4J00_RS15195 PF01380 SIS domain H4J00_RS15195 PF00571 CBS domain H4J00_RS15210 PF03968 OstA-like protein H4J00_RS15215 PF00005 ABC transporter H4J00_RS15220 PF00309 Sigma-54 factor, Activator interacting domain (AID) H4J00_RS15220 PF04963 Sigma-54 factor, core binding domain H4J00_RS15220 PF04552 Sigma-54, DNA binding domain H4J00_RS15225 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H4J00_RS15230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H4J00_RS15235 PF02603 HPr Serine kinase N terminus H4J00_RS15235 PF07475 HPr Serine kinase C-terminal domain H4J00_RS15240 PF03668 P-loop ATPase protein family H4J00_RS15250 PF00381 PTS HPr component phosphorylation site H4J00_RS15255 PF05524 PEP-utilising enzyme, N-terminal H4J00_RS15255 PF00391 PEP-utilising enzyme, mobile domain H4J00_RS15255 PF02896 PEP-utilising enzyme, TIM barrel domain H4J00_RS15260 PF01769 Divalent cation transporter H4J00_RS15260 PF00571 CBS domain H4J00_RS15260 PF03448 MgtE intracellular N domain H4J00_RS15265 PF00756 Putative esterase H4J00_RS15270 PF02322 Cytochrome bd terminal oxidase subunit II H4J00_RS15275 PF01654 Cytochrome bd terminal oxidase subunit I H4J00_RS15285 PF00324 Amino acid permease H4J00_RS15295 PF00561 alpha/beta hydrolase fold H4J00_RS15300 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS15305 PF00324 Amino acid permease H4J00_RS15320 PF12706 Beta-lactamase superfamily domain H4J00_RS15325 PF04820 Tryptophan halogenase H4J00_RS15355 PF00376 MerR family regulatory protein H4J00_RS15355 PF09278 MerR, DNA binding H4J00_RS15365 PF03738 Glutathionylspermidine synthase preATP-grasp H4J00_RS15390 PF04012 PspA/IM30 family H4J00_RS15400 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H4J00_RS15400 PF01243 Pyridoxamine 5'-phosphate oxidase H4J00_RS15405 PF01202 Shikimate kinase H4J00_RS15410 PF01761 3-dehydroquinate synthase H4J00_RS15420 PF01208 Uroporphyrinogen decarboxylase (URO-D) H4J00_RS15475 PF06715 Gp5 C-terminal repeat (3 copies) H4J00_RS15475 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15480 PF13333 Integrase core domain H4J00_RS15480 PF00665 Integrase core domain H4J00_RS15480 PF13276 HTH-like domain H4J00_RS15495 PF01471 Putative peptidoglycan binding domain H4J00_RS15495 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15500 PF05598 Transposase domain (DUF772) H4J00_RS15500 PF01609 Transposase DDE domain H4J00_RS15555 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15555 PF06715 Gp5 C-terminal repeat (3 copies) H4J00_RS15565 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS15565 PF07724 AAA domain (Cdc48 subfamily) H4J00_RS15565 PF10431 C-terminal, D2-small domain, of ClpB protein H4J00_RS15565 PF17871 AAA lid domain H4J00_RS15575 PF05947 Type VI secretion system, TssF H4J00_RS15590 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H4J00_RS15595 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H4J00_RS15620 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS15620 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15620 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS15635 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS15635 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15635 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS15750 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS15750 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15750 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS15770 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS15785 PF00691 OmpA family H4J00_RS15785 PF04972 BON domain H4J00_RS15795 PF06761 Intracellular multiplication and human macrophage-killing H4J00_RS15795 PF14331 ImcF-related N-terminal domain H4J00_RS15795 PF06744 Type VI secretion protein IcmF C-terminal H4J00_RS15835 PF02222 ATP-grasp domain H4J00_RS15860 PF00730 HhH-GPD superfamily base excision DNA repair protein H4J00_RS15875 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS15875 PF00072 Response regulator receiver domain H4J00_RS15880 PF07730 Histidine kinase H4J00_RS15890 PF03775 Septum formation inhibitor MinC, C-terminal domain H4J00_RS15890 PF05209 Septum formation inhibitor MinC, N-terminal domain H4J00_RS15895 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H4J00_RS15900 PF03776 Septum formation topological specificity factor MinE H4J00_RS15910 PF08521 Two-component sensor kinase N-terminal H4J00_RS15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS15910 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS15915 PF00072 Response regulator receiver domain H4J00_RS15915 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS15920 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H4J00_RS15930 PF00884 Sulfatase H4J00_RS15930 PF08019 Phosphoethanolamine transferase EptA/EptB H4J00_RS15950 PF03412 Peptidase C39 family H4J00_RS15950 PF00005 ABC transporter H4J00_RS15950 PF00664 ABC transporter transmembrane region H4J00_RS15970 PF02347 Glycine cleavage system P-protein H4J00_RS15995 PF06628 Catalase-related immune-responsive H4J00_RS15995 PF18011 C-terminal domain found in long catalases H4J00_RS15995 PF00199 Catalase H4J00_RS16030 PF02311 AraC-like ligand binding domain H4J00_RS16030 PF12833 Helix-turn-helix domain H4J00_RS16040 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region H4J00_RS16040 PF07676 WD40-like Beta Propeller Repeat H4J00_RS16040 PF00326 Prolyl oligopeptidase family H4J00_RS16055 PF03169 OPT oligopeptide transporter protein H4J00_RS16070 PF07733 Bacterial DNA polymerase III alpha NTPase domain H4J00_RS16070 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H4J00_RS16070 PF14579 Helix-hairpin-helix motif H4J00_RS16070 PF02811 PHP domain H4J00_RS16090 PF01726 LexA DNA binding domain H4J00_RS16090 PF00717 Peptidase S24-like H4J00_RS16115 PF00300 Histidine phosphatase superfamily (branch 1) H4J00_RS16115 PF13456 Reverse transcriptase-like H4J00_RS16150 PF05598 Transposase domain (DUF772) H4J00_RS16150 PF01609 Transposase DDE domain H4J00_RS16155 PF01420 Type I restriction modification DNA specificity domain H4J00_RS16160 PF12161 HsdM N-terminal domain H4J00_RS16160 PF02384 N-6 DNA Methylase H4J00_RS16175 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H4J00_RS16175 PF04851 Type III restriction enzyme, res subunit H4J00_RS16175 PF08463 EcoEI R protein C-terminal H4J00_RS16175 PF00271 Helicase conserved C-terminal domain H4J00_RS16190 PF08463 EcoEI R protein C-terminal H4J00_RS16190 PF04851 Type III restriction enzyme, res subunit H4J00_RS16190 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) H4J00_RS16190 PF00271 Helicase conserved C-terminal domain H4J00_RS16195 PF02661 Fic/DOC family H4J00_RS16200 PF02384 N-6 DNA Methylase H4J00_RS16205 PF01420 Type I restriction modification DNA specificity domain H4J00_RS16235 PF01433 Peptidase family M1 domain H4J00_RS16235 PF11838 ERAP1-like C-terminal domain H4J00_RS16240 PF00709 Adenylosuccinate synthetase H4J00_RS16250 PF01145 SPFH domain / Band 7 family H4J00_RS16255 PF12221 Bacterial membrane protein N terminal H4J00_RS16255 PF01145 SPFH domain / Band 7 family H4J00_RS16260 PF00072 Response regulator receiver domain H4J00_RS16265 PF00226 DnaJ domain H4J00_RS16265 PF01556 DnaJ C terminal domain H4J00_RS16275 PF08534 Redoxin H4J00_RS16315 PF00593 TonB dependent receptor H4J00_RS16315 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS16320 PF04303 PrpF protein H4J00_RS16335 PF00694 Aconitase C-terminal domain H4J00_RS16335 PF00330 Aconitase family (aconitate hydratase) H4J00_RS16340 PF00285 Citrate synthase, C-terminal domain H4J00_RS16350 PF02954 Bacterial regulatory protein, Fis family H4J00_RS16350 PF06506 Propionate catabolism activator H4J00_RS16350 PF00158 Sigma-54 interaction domain H4J00_RS16360 PF01609 Transposase DDE domain H4J00_RS16360 PF05598 Transposase domain (DUF772) H4J00_RS16380 PF09115 DNA polymerase III, delta subunit, C terminal H4J00_RS16385 PF02618 YceG-like family H4J00_RS16390 PF04715 Anthranilate synthase component I, N terminal region H4J00_RS16390 PF00425 chorismate binding enzyme H4J00_RS16395 PF00109 Beta-ketoacyl synthase, N-terminal domain H4J00_RS16395 PF02801 Beta-ketoacyl synthase, C-terminal domain H4J00_RS16400 PF00550 Phosphopantetheine attachment site H4J00_RS16410 PF00698 Acyl transferase domain H4J00_RS16420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H4J00_RS16420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H4J00_RS16425 PF01783 Ribosomal L32p protein family H4J00_RS16430 PF02620 Large ribosomal RNA subunit accumulation protein YceD H4J00_RS16435 PF02545 Maf-like protein H4J00_RS16450 PF17863 AAA lid domain H4J00_RS16450 PF07726 ATPase family associated with various cellular activities (AAA) H4J00_RS16460 PF01841 Transglutaminase-like superfamily H4J00_RS16460 PF13559 Domain of unknown function (DUF4129) H4J00_RS16460 PF11992 Domain of unknown function (DUF3488) H4J00_RS16470 PF01230 HIT domain H4J00_RS16475 PF02132 RecR protein H4J00_RS16475 PF13662 Toprim domain H4J00_RS16480 PF02575 YbaB/EbfC DNA-binding family H4J00_RS16485 PF12170 DNA polymerase III tau subunit V interacting with alpha H4J00_RS16485 PF12169 DNA polymerase III subunits gamma and tau domain III H4J00_RS16485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H4J00_RS16500 PF02391 MoaE protein H4J00_RS16505 PF02597 ThiS family H4J00_RS16510 PF01967 MoaC family H4J00_RS16520 PF04055 Radical SAM superfamily H4J00_RS16520 PF06463 Molybdenum Cofactor Synthesis C H4J00_RS16525 PF00753 Metallo-beta-lactamase superfamily H4J00_RS16525 PF12706 Beta-lactamase superfamily domain H4J00_RS16535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H4J00_RS16555 PF00929 Exonuclease H4J00_RS16560 PF00075 RNase H H4J00_RS16570 PF16123 Hydroxyacylglutathione hydrolase C-terminus H4J00_RS16570 PF00753 Metallo-beta-lactamase superfamily H4J00_RS16575 PF01476 LysM domain H4J00_RS16575 PF05257 CHAP domain H4J00_RS16600 PF00216 Bacterial DNA-binding protein H4J00_RS16605 PF05362 Lon protease (S16) C-terminal proteolytic domain H4J00_RS16605 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS16605 PF02190 ATP-dependent protease La (LON) substrate-binding domain H4J00_RS16610 PF10431 C-terminal, D2-small domain, of ClpB protein H4J00_RS16610 PF06689 ClpX C4-type zinc finger H4J00_RS16610 PF07724 AAA domain (Cdc48 subfamily) H4J00_RS16615 PF00574 Clp protease H4J00_RS16620 PF05698 Bacterial trigger factor protein (TF) C-terminus H4J00_RS16620 PF05697 Bacterial trigger factor protein (TF) H4J00_RS16665 PF18324 Hypothetical protein TT1725 H4J00_RS16665 PF00180 Isocitrate/isopropylmalate dehydrogenase H4J00_RS16675 PF00462 Glutaredoxin H4J00_RS16680 PF13181 Tetratricopeptide repeat H4J00_RS16680 PF01435 Peptidase family M48 H4J00_RS16685 PF00072 Response regulator receiver domain H4J00_RS16685 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS16690 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS16690 PF00989 PAS fold H4J00_RS16690 PF11808 Phosphate regulon sensor protein PhoR H4J00_RS16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS16695 PF13089 Polyphosphate kinase N-terminal domain H4J00_RS16695 PF17941 Polyphosphate kinase C-terminal domain 1 H4J00_RS16695 PF02503 Polyphosphate kinase middle domain H4J00_RS16695 PF13090 Polyphosphate kinase C-terminal domain 2 H4J00_RS16700 PF02541 Ppx/GppA phosphatase family H4J00_RS16705 PF13439 Glycosyltransferase Family 4 H4J00_RS16705 PF00534 Glycosyl transferases group 1 H4J00_RS16710 PF01569 PAP2 superfamily H4J00_RS16715 PF00149 Calcineurin-like phosphoesterase H4J00_RS16735 PF04305 Protein of unknown function (DUF455) H4J00_RS16740 PF00156 Phosphoribosyl transferase domain H4J00_RS16755 PF02875 Mur ligase family, glutamate ligase domain H4J00_RS16755 PF08245 Mur ligase middle domain H4J00_RS16760 PF00300 Histidine phosphatase superfamily (branch 1) H4J00_RS16775 PF04185 Phosphoesterase family H4J00_RS16775 PF05506 Domain of unknown function (DUF756) H4J00_RS16785 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS16785 PF00107 Zinc-binding dehydrogenase H4J00_RS16795 PF17850 CysA C-terminal regulatory domain H4J00_RS16795 PF12857 TOBE-like domain H4J00_RS16795 PF00005 ABC transporter H4J00_RS16800 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS16805 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS16815 PF00155 Aminotransferase class I and II H4J00_RS16825 PF00849 RNA pseudouridylate synthase H4J00_RS16835 PF00691 OmpA family H4J00_RS16835 PF05736 OprF membrane domain H4J00_RS16840 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS16840 PF00107 Zinc-binding dehydrogenase H4J00_RS16845 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS16845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H4J00_RS16855 PF00480 ROK family H4J00_RS16880 PF03009 Glycerophosphoryl diester phosphodiesterase family H4J00_RS16900 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H4J00_RS16900 PF00056 lactate/malate dehydrogenase, NAD binding domain H4J00_RS16905 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H4J00_RS16910 PF00679 Elongation factor G C-terminus H4J00_RS16910 PF00009 Elongation factor Tu GTP binding domain H4J00_RS16910 PF03144 Elongation factor Tu domain 2 H4J00_RS16930 PF01474 Class-II DAHP synthetase family H4J00_RS16945 PF02600 Disulfide bond formation protein DsbB H4J00_RS16950 PF01196 Ribosomal protein L17 H4J00_RS16955 PF01000 RNA polymerase Rpb3/RpoA insert domain H4J00_RS16955 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H4J00_RS16955 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H4J00_RS16960 PF00163 Ribosomal protein S4/S9 N-terminal domain H4J00_RS16960 PF01479 S4 domain H4J00_RS16965 PF00411 Ribosomal protein S11 H4J00_RS16970 PF00416 Ribosomal protein S13/S18 H4J00_RS16975 PF00344 SecY translocase H4J00_RS16980 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H4J00_RS16985 PF00327 Ribosomal protein L30p/L7e H4J00_RS16990 PF00333 Ribosomal protein S5, N-terminal domain H4J00_RS16990 PF03719 Ribosomal protein S5, C-terminal domain H4J00_RS16995 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H4J00_RS17000 PF00347 Ribosomal protein L6 H4J00_RS17005 PF00410 Ribosomal protein S8 H4J00_RS17010 PF00253 Ribosomal protein S14p/S29e H4J00_RS17015 PF00281 Ribosomal protein L5 H4J00_RS17015 PF00673 ribosomal L5P family C-terminus H4J00_RS17020 PF00467 KOW motif H4J00_RS17020 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H4J00_RS17025 PF00238 Ribosomal protein L14p/L23e H4J00_RS17030 PF00366 Ribosomal protein S17 H4J00_RS17035 PF00831 Ribosomal L29 protein H4J00_RS17040 PF00252 Ribosomal protein L16p/L10e H4J00_RS17045 PF07650 KH domain H4J00_RS17045 PF00189 Ribosomal protein S3, C-terminal domain H4J00_RS17050 PF00237 Ribosomal protein L22p/L17e H4J00_RS17055 PF00203 Ribosomal protein S19 H4J00_RS17060 PF00181 Ribosomal Proteins L2, RNA binding domain H4J00_RS17060 PF03947 Ribosomal Proteins L2, C-terminal domain H4J00_RS17065 PF00276 Ribosomal protein L23 H4J00_RS17070 PF00573 Ribosomal protein L4/L1 family H4J00_RS17075 PF00297 Ribosomal protein L3 H4J00_RS17080 PF00338 Ribosomal protein S10p/S20e H4J00_RS17090 PF00009 Elongation factor Tu GTP binding domain H4J00_RS17090 PF03144 Elongation factor Tu domain 2 H4J00_RS17090 PF03143 Elongation factor Tu C-terminal domain H4J00_RS17095 PF00679 Elongation factor G C-terminus H4J00_RS17095 PF14492 Elongation Factor G, domain II H4J00_RS17095 PF03764 Elongation factor G, domain IV H4J00_RS17095 PF03144 Elongation factor Tu domain 2 H4J00_RS17095 PF00009 Elongation factor Tu GTP binding domain H4J00_RS17100 PF00177 Ribosomal protein S7p/S5e H4J00_RS17105 PF00164 Ribosomal protein S12/S23 H4J00_RS17110 PF04997 RNA polymerase Rpb1, domain 1 H4J00_RS17110 PF00623 RNA polymerase Rpb1, domain 2 H4J00_RS17110 PF04983 RNA polymerase Rpb1, domain 3 H4J00_RS17110 PF05000 RNA polymerase Rpb1, domain 4 H4J00_RS17110 PF04998 RNA polymerase Rpb1, domain 5 H4J00_RS17115 PF04565 RNA polymerase Rpb2, domain 3 H4J00_RS17115 PF04560 RNA polymerase Rpb2, domain 7 H4J00_RS17115 PF00562 RNA polymerase Rpb2, domain 6 H4J00_RS17115 PF10385 RNA polymerase beta subunit external 1 domain H4J00_RS17115 PF04561 RNA polymerase Rpb2, domain 2 H4J00_RS17115 PF04563 RNA polymerase beta subunit H4J00_RS17120 PF00542 Ribosomal protein L7/L12 C-terminal domain H4J00_RS17120 PF16320 Ribosomal protein L7/L12 dimerisation domain H4J00_RS17125 PF00466 Ribosomal protein L10 H4J00_RS17130 PF00687 Ribosomal protein L1p/L10e family H4J00_RS17135 PF00298 Ribosomal protein L11, RNA binding domain H4J00_RS17135 PF03946 Ribosomal protein L11, N-terminal domain H4J00_RS17140 PF00467 KOW motif H4J00_RS17140 PF02357 Transcription termination factor nusG H4J00_RS17145 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H4J00_RS17155 PF03143 Elongation factor Tu C-terminal domain H4J00_RS17155 PF03144 Elongation factor Tu domain 2 H4J00_RS17155 PF00009 Elongation factor Tu GTP binding domain H4J00_RS17175 PF01926 50S ribosome-binding GTPase H4J00_RS17175 PF06071 Protein of unknown function (DUF933) H4J00_RS17180 PF01195 Peptidyl-tRNA hydrolase H4J00_RS17185 PF01386 Ribosomal L25p family H4J00_RS17185 PF14693 Ribosomal protein TL5, C-terminal domain H4J00_RS17190 PF14572 Phosphoribosyl synthetase-associated domain H4J00_RS17190 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H4J00_RS17200 PF00288 GHMP kinases N terminal domain H4J00_RS17200 PF08544 GHMP kinases C terminal H4J00_RS17205 PF03550 Outer membrane lipoprotein LolB H4J00_RS17215 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H4J00_RS17215 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H4J00_RS17215 PF01488 Shikimate / quinate 5-dehydrogenase H4J00_RS17220 PF00472 RF-1 domain H4J00_RS17220 PF03462 PCRF domain H4J00_RS17230 PF00994 Probable molybdopterin binding domain H4J00_RS17235 PF03976 Polyphosphate kinase 2 (PPK2) H4J00_RS17245 PF00708 Acylphosphatase H4J00_RS17250 PF08534 Redoxin H4J00_RS17255 PF03631 Virulence factor BrkB H4J00_RS17260 PF03358 NADPH-dependent FMN reductase H4J00_RS17290 PF04073 Aminoacyl-tRNA editing domain H4J00_RS17300 PF01063 Amino-transferase class IV H4J00_RS17325 PF02233 NAD(P) transhydrogenase beta subunit H4J00_RS17330 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H4J00_RS17355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H4J00_RS17355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H4J00_RS17355 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H4J00_RS17370 PF00476 DNA polymerase family A H4J00_RS17370 PF01612 3'-5' exonuclease H4J00_RS17370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H4J00_RS17370 PF01367 5'-3' exonuclease, C-terminal SAM fold H4J00_RS17375 PF00293 NUDIX domain H4J00_RS17385 PF00561 alpha/beta hydrolase fold H4J00_RS17400 PF05175 Methyltransferase small domain H4J00_RS17400 PF17827 PrmC N-terminal domain H4J00_RS17405 PF10417 C-terminal domain of 1-Cys peroxiredoxin H4J00_RS17405 PF00578 AhpC/TSA family H4J00_RS17410 PF13192 Thioredoxin domain H4J00_RS17410 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS17415 PF03466 LysR substrate binding domain H4J00_RS17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS17425 PF00923 Transaldolase/Fructose-6-phosphate aldolase H4J00_RS17430 PF01625 Peptide methionine sulfoxide reductase H4J00_RS17440 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS17440 PF00072 Response regulator receiver domain H4J00_RS17460 PF00749 tRNA synthetases class I (E and Q), catalytic domain H4J00_RS17460 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H4J00_RS17470 PF00892 EamA-like transporter family H4J00_RS17490 PF18125 RlmM ferredoxin-like domain H4J00_RS17490 PF01728 FtsJ-like methyltransferase H4J00_RS17495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H4J00_RS17495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H4J00_RS17500 PF08450 SMP-30/Gluconolactonase/LRE-like region H4J00_RS17520 PF00378 Enoyl-CoA hydratase/isomerase H4J00_RS17525 PF00171 Aldehyde dehydrogenase family H4J00_RS17530 PF00501 AMP-binding enzyme H4J00_RS17530 PF13193 AMP-binding enzyme C-terminal domain H4J00_RS17535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS17535 PF03466 LysR substrate binding domain H4J00_RS17540 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit H4J00_RS17540 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H4J00_RS17545 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase H4J00_RS17570 PF01494 FAD binding domain H4J00_RS17575 PF01494 FAD binding domain H4J00_RS17585 PF01923 Cobalamin adenosyltransferase H4J00_RS17590 PF00850 Histone deacetylase domain H4J00_RS17595 PF03968 OstA-like protein H4J00_RS17595 PF04453 LPS transport system D H4J00_RS17600 PF09312 SurA N-terminal domain H4J00_RS17600 PF00639 PPIC-type PPIASE domain H4J00_RS17605 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H4J00_RS17615 PF00398 Ribosomal RNA adenine dimethylase H4J00_RS17620 PF04379 ApaG domain H4J00_RS17625 PF00149 Calcineurin-like phosphoesterase H4J00_RS17630 PF00186 Dihydrofolate reductase H4J00_RS17640 PF00303 Thymidylate synthase H4J00_RS17645 PF01790 Prolipoprotein diacylglyceryl transferase H4J00_RS17665 PF01219 Prokaryotic diacylglycerol kinase H4J00_RS17680 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS17680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS17680 PF08521 Two-component sensor kinase N-terminal H4J00_RS17685 PF00072 Response regulator receiver domain H4J00_RS17685 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS17690 PF13472 GDSL-like Lipase/Acylhydrolase family H4J00_RS17695 PF00005 ABC transporter H4J00_RS17705 PF02668 Taurine catabolism dioxygenase TauD, TfdA family H4J00_RS17740 PF00248 Aldo/keto reductase family H4J00_RS17750 PF07662 Na+ dependent nucleoside transporter C-terminus H4J00_RS17750 PF01773 Na+ dependent nucleoside transporter N-terminus H4J00_RS17750 PF07670 Nucleoside recognition H4J00_RS17755 PF00294 pfkB family carbohydrate kinase H4J00_RS17765 PF01207 Dihydrouridine synthase (Dus) H4J00_RS17780 PF02773 S-adenosylmethionine synthetase, C-terminal domain H4J00_RS17780 PF02772 S-adenosylmethionine synthetase, central domain H4J00_RS17780 PF00438 S-adenosylmethionine synthetase, N-terminal domain H4J00_RS17785 PF00328 Histidine phosphatase superfamily (branch 2) H4J00_RS17810 PF00311 Phosphoenolpyruvate carboxylase H4J00_RS17820 PF05221 S-adenosyl-L-homocysteine hydrolase H4J00_RS17820 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain H4J00_RS17825 PF13649 Methyltransferase domain H4J00_RS17855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H4J00_RS17865 PF00082 Subtilase family H4J00_RS17865 PF09286 Pro-kumamolisin, activation domain H4J00_RS17870 PF00698 Acyl transferase domain H4J00_RS17870 PF00109 Beta-ketoacyl synthase, N-terminal domain H4J00_RS17870 PF00107 Zinc-binding dehydrogenase H4J00_RS17870 PF16197 Ketoacyl-synthetase C-terminal extension H4J00_RS17870 PF02801 Beta-ketoacyl synthase, C-terminal domain H4J00_RS17870 PF08659 KR domain H4J00_RS17870 PF00550 Phosphopantetheine attachment site H4J00_RS17870 PF14765 Polyketide synthase dehydratase H4J00_RS17870 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS17880 PF02219 Methylenetetrahydrofolate reductase H4J00_RS17895 PF00293 NUDIX domain H4J00_RS17905 PF07516 SecA Wing and Scaffold domain H4J00_RS17905 PF01043 SecA preprotein cross-linking domain H4J00_RS17905 PF07517 SecA DEAD-like domain H4J00_RS17905 PF02810 SEC-C motif H4J00_RS17910 PF01476 LysM domain H4J00_RS17910 PF01551 Peptidase family M23 H4J00_RS17920 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H4J00_RS17925 PF12327 FtsZ family, C-terminal domain H4J00_RS17925 PF00091 Tubulin/FtsZ family, GTPase domain H4J00_RS17935 PF02491 SHS2 domain inserted in FTSA H4J00_RS17940 PF03799 Cell division protein FtsQ H4J00_RS17940 PF08478 POTRA domain, FtsQ-type H4J00_RS17945 PF01820 D-ala D-ala ligase N-terminus H4J00_RS17945 PF07478 D-ala D-ala ligase C-terminus H4J00_RS17950 PF02875 Mur ligase family, glutamate ligase domain H4J00_RS17950 PF08245 Mur ligase middle domain H4J00_RS17950 PF01225 Mur ligase family, catalytic domain H4J00_RS17955 PF03033 Glycosyltransferase family 28 N-terminal domain H4J00_RS17955 PF04101 Glycosyltransferase family 28 C-terminal domain H4J00_RS17960 PF01098 Cell cycle protein H4J00_RS17965 PF00953 Glycosyl transferase family 4 H4J00_RS17970 PF02875 Mur ligase family, glutamate ligase domain H4J00_RS17970 PF08245 Mur ligase middle domain H4J00_RS17970 PF01225 Mur ligase family, catalytic domain H4J00_RS17975 PF01225 Mur ligase family, catalytic domain H4J00_RS17975 PF02875 Mur ligase family, glutamate ligase domain H4J00_RS17975 PF08245 Mur ligase middle domain H4J00_RS17980 PF03717 Penicillin-binding Protein dimerisation domain H4J00_RS17980 PF00905 Penicillin binding protein transpeptidase domain H4J00_RS17985 PF04999 Cell division protein FtsL H4J00_RS17990 PF01795 MraW methylase family H4J00_RS17995 PF02381 MraZ protein, putative antitoxin-like H4J00_RS18020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H4J00_RS18030 PF02021 Uncharacterised protein family UPF0102 H4J00_RS18035 PF04307 LexA-binding, inner membrane-associated putative hydrolase H4J00_RS18040 PF01565 FAD binding domain H4J00_RS18040 PF02913 FAD linked oxidases, C-terminal domain H4J00_RS18045 PF00072 Response regulator receiver domain H4J00_RS18045 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS18050 PF13493 Domain of unknown function (DUF4118) H4J00_RS18050 PF13492 GAF domain H4J00_RS18050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS18050 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS18050 PF02702 Osmosensitive K+ channel His kinase sensor domain H4J00_RS18055 PF02669 K+-transporting ATPase, c chain H4J00_RS18065 PF03814 Potassium-transporting ATPase A subunit H4J00_RS18085 PF00586 AIR synthase related protein, N-terminal domain H4J00_RS18085 PF02769 AIR synthase related protein, C-terminal domain H4J00_RS18090 PF01029 NusB family H4J00_RS18095 PF00885 6,7-dimethyl-8-ribityllumazine synthase H4J00_RS18100 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H4J00_RS18100 PF00925 GTP cyclohydrolase II H4J00_RS18105 PF00677 Lumazine binding domain H4J00_RS18115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H4J00_RS18115 PF01872 RibD C-terminal domain H4J00_RS18130 PF03477 ATP cone domain H4J00_RS18140 PF00464 Serine hydroxymethyltransferase H4J00_RS18160 PF00005 ABC transporter H4J00_RS18160 PF12848 ABC transporter H4J00_RS18175 PF00756 Putative esterase H4J00_RS18180 PF04828 Glutathione-dependent formaldehyde-activating enzyme H4J00_RS18185 PF00107 Zinc-binding dehydrogenase H4J00_RS18185 PF08240 Alcohol dehydrogenase GroES-like domain H4J00_RS18190 PF02583 Metal-sensitive transcriptional repressor H4J00_RS18200 PF00072 Response regulator receiver domain H4J00_RS18200 PF00486 Transcriptional regulatory protein, C terminal H4J00_RS18205 PF16527 Two-component sensor protein CpxA, periplasmic domain H4J00_RS18205 PF00672 HAMP domain H4J00_RS18205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS18205 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS18235 PF04107 Glutamate-cysteine ligase family 2(GCS2) H4J00_RS18245 PF01926 50S ribosome-binding GTPase H4J00_RS18250 PF00034 Cytochrome c H4J00_RS18280 PF05199 GMC oxidoreductase H4J00_RS18280 PF00732 GMC oxidoreductase H4J00_RS18290 PF01966 HD domain H4J00_RS18290 PF12627 Probable RNA and SrmB- binding site of polymerase A H4J00_RS18290 PF01743 Poly A polymerase head domain H4J00_RS18305 PF14883 Hypothetical glycosyl hydrolase family 13 H4J00_RS18305 PF01522 Polysaccharide deacetylase H4J00_RS18310 PF00535 Glycosyl transferase family 2 H4J00_RS18320 PF01979 Amidohydrolase family H4J00_RS18325 PF01380 SIS domain H4J00_RS18330 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS18335 PF07690 Major Facilitator Superfamily H4J00_RS18340 PF07702 UTRA domain H4J00_RS18340 PF00392 Bacterial regulatory proteins, gntR family H4J00_RS18355 PF16355 Domain of unknown function (DUF4982) H4J00_RS18355 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 H4J00_RS18355 PF00703 Glycosyl hydrolases family 2 H4J00_RS18355 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H4J00_RS18355 PF02837 Glycosyl hydrolases family 2, sugar binding domain H4J00_RS18390 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H4J00_RS18395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS18395 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS18400 PF00072 Response regulator receiver domain H4J00_RS18405 PF01590 GAF domain H4J00_RS18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS18405 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS18405 PF08446 PAS fold H4J00_RS18405 PF00360 Phytochrome region H4J00_RS18410 PF04972 BON domain H4J00_RS18415 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H4J00_RS18415 PF02894 Oxidoreductase family, C-terminal alpha/beta domain H4J00_RS18420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H4J00_RS18420 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H4J00_RS18455 PF01467 Cytidylyltransferase-like H4J00_RS18455 PF00293 NUDIX domain H4J00_RS18465 PF00595 PDZ domain H4J00_RS18465 PF03572 Peptidase family S41 H4J00_RS18465 PF17804 Tail specific protease N-terminal domain H4J00_RS18465 PF11818 C-terminal domain of tail specific protease (DUF3340) H4J00_RS18470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H4J00_RS18470 PF04055 Radical SAM superfamily H4J00_RS18475 PF03099 Biotin/lipoate A/B protein ligase family H4J00_RS18480 PF04359 Protein of unknown function (DUF493) H4J00_RS18495 PF00768 D-alanyl-D-alanine carboxypeptidase H4J00_RS18495 PF07943 Penicillin-binding protein 5, C-terminal domain H4J00_RS18500 PF03330 Lytic transglycolase H4J00_RS18500 PF05036 Sporulation related domain H4J00_RS18505 PF13406 Transglycosylase SLT domain H4J00_RS18520 PF13276 HTH-like domain H4J00_RS18520 PF13683 Integrase core domain H4J00_RS18530 PF05257 CHAP domain H4J00_RS18530 PF01476 LysM domain H4J00_RS18535 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS18535 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS18535 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS18545 PF01510 N-acetylmuramoyl-L-alanine amidase H4J00_RS18545 PF01471 Putative peptidoglycan binding domain H4J00_RS18545 PF01476 LysM domain H4J00_RS18550 PF13296 Putative type VI secretion system Rhs element Vgr H4J00_RS18550 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) H4J00_RS18550 PF04717 Type VI secretion system, phage-baseplate injector H4J00_RS18560 PF01098 Cell cycle protein H4J00_RS18565 PF03717 Penicillin-binding Protein dimerisation domain H4J00_RS18565 PF00905 Penicillin binding protein transpeptidase domain H4J00_RS18575 PF04085 rod shape-determining protein MreC H4J00_RS18585 PF00294 pfkB family carbohydrate kinase H4J00_RS18600 PF11838 ERAP1-like C-terminal domain H4J00_RS18600 PF01433 Peptidase family M1 domain H4J00_RS18605 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS18605 PF00563 EAL domain H4J00_RS18605 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS18610 PF01209 ubiE/COQ5 methyltransferase family H4J00_RS18620 PF13533 Biotin-lipoyl like H4J00_RS18625 PF13673 Acetyltransferase (GNAT) domain H4J00_RS18635 PF00004 ATPase family associated with various cellular activities (AAA) H4J00_RS18635 PF07724 AAA domain (Cdc48 subfamily) H4J00_RS18635 PF10431 C-terminal, D2-small domain, of ClpB protein H4J00_RS18640 PF00227 Proteasome subunit H4J00_RS18650 PF02899 Phage integrase, N-terminal SAM-like domain H4J00_RS18650 PF00589 Phage integrase family H4J00_RS18660 PF01678 Diaminopimelate epimerase H4J00_RS18670 PF04304 Protein of unknown function (DUF454) H4J00_RS18675 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H4J00_RS18675 PF00326 Prolyl oligopeptidase family H4J00_RS18680 PF00155 Aminotransferase class I and II H4J00_RS18690 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H4J00_RS18690 PF00326 Prolyl oligopeptidase family H4J00_RS18715 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H4J00_RS18715 PF03900 Porphobilinogen deaminase, C-terminal domain H4J00_RS18720 PF04397 LytTr DNA-binding domain H4J00_RS18720 PF00072 Response regulator receiver domain H4J00_RS18725 PF07694 5TMR of 5TMR-LYT H4J00_RS18725 PF06580 Histidine kinase H4J00_RS18735 PF13632 Glycosyl transferase family group 2 H4J00_RS18740 PF01609 Transposase DDE domain H4J00_RS18740 PF05598 Transposase domain (DUF772) H4J00_RS18760 PF01740 STAS domain H4J00_RS18760 PF00916 Sulfate permease family H4J00_RS18780 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS18780 PF03707 Bacterial signalling protein N terminal repeat H4J00_RS18780 PF00563 EAL domain H4J00_RS18810 PF01204 Trehalase H4J00_RS18840 PF01544 CorA-like Mg2+ transporter protein H4J00_RS18850 PF00324 Amino acid permease H4J00_RS18870 PF03330 Lytic transglycolase H4J00_RS18875 PF00892 EamA-like transporter family H4J00_RS18890 PF07759 Protein of unknown function (DUF1615) H4J00_RS18935 PF00106 short chain dehydrogenase H4J00_RS18950 PF17831 Pyruvate dehydrogenase E1 component middle domain H4J00_RS18950 PF00456 Transketolase, thiamine diphosphate binding domain H4J00_RS18975 PF00793 DAHP synthetase I family H4J00_RS18985 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS18985 PF00593 TonB dependent receptor H4J00_RS19000 PF00118 TCP-1/cpn60 chaperonin family H4J00_RS19005 PF00166 Chaperonin 10 Kd subunit H4J00_RS19030 PF03458 UPF0126 domain H4J00_RS19035 PF04542 Sigma-70 region 2 H4J00_RS19035 PF04545 Sigma-70, region 4 H4J00_RS19040 PF03167 Uracil DNA glycosylase superfamily H4J00_RS19045 PF01339 CheB methylesterase H4J00_RS19045 PF00072 Response regulator receiver domain H4J00_RS19050 PF18075 FtsX extracellular domain H4J00_RS19055 PF00005 ABC transporter H4J00_RS19060 PF00270 DEAD/DEAH box helicase H4J00_RS19060 PF00271 Helicase conserved C-terminal domain H4J00_RS19060 PF12300 ATP-dependent RNA helicase RhlB H4J00_RS19065 PF00085 Thioredoxin H4J00_RS19070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H4J00_RS19070 PF07497 Rho termination factor, RNA-binding domain H4J00_RS19070 PF07498 Rho termination factor, N-terminal domain H4J00_RS19090 PF03971 Monomeric isocitrate dehydrogenase H4J00_RS19105 PF14489 QueF-like protein H4J00_RS19105 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H4J00_RS19115 PF07687 Peptidase dimerisation domain H4J00_RS19115 PF01546 Peptidase family M20/M25/M40 H4J00_RS19120 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H4J00_RS19125 PF00873 AcrB/AcrD/AcrF family H4J00_RS19130 PF00873 AcrB/AcrD/AcrF family H4J00_RS19150 PF07063 Domain of unknown function (DUF1338) H4J00_RS19190 PF01427 D-ala-D-ala dipeptidase H4J00_RS19195 PF01510 N-acetylmuramoyl-L-alanine amidase H4J00_RS19205 PF13378 Enolase C-terminal domain-like H4J00_RS19205 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H4J00_RS19220 PF13520 Amino acid permease H4J00_RS19240 PF05360 yiaA/B two helix domain H4J00_RS19250 PF07995 Glucose / Sorbosone dehydrogenase H4J00_RS19265 PF00933 Glycosyl hydrolase family 3 N terminal domain H4J00_RS19265 PF01915 Glycosyl hydrolase family 3 C-terminal domain H4J00_RS19265 PF14310 Fibronectin type III-like domain H4J00_RS19270 PF02152 Dihydroneopterin aldolase H4J00_RS19275 PF00814 Glycoprotease family H4J00_RS19285 PF01165 Ribosomal protein S21 H4J00_RS19290 PF09424 Yqey-like protein H4J00_RS19305 PF03631 Virulence factor BrkB H4J00_RS19310 PF10410 DnaB-helicase binding domain of primase H4J00_RS19310 PF08278 DNA primase DnaG DnaB-binding H4J00_RS19310 PF08275 DNA primase catalytic core, N-terminal domain H4J00_RS19310 PF01807 CHC2 zinc finger H4J00_RS19320 PF13593 SBF-like CPA transporter family (DUF4137) H4J00_RS19335 PF01040 UbiA prenyltransferase family H4J00_RS19360 PF00510 Cytochrome c oxidase subunit III H4J00_RS19365 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 H4J00_RS19375 PF00115 Cytochrome C and Quinol oxidase polypeptide I H4J00_RS19380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H4J00_RS19380 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H4J00_RS19390 PF00171 Aldehyde dehydrogenase family H4J00_RS19390 PF01619 Proline dehydrogenase H4J00_RS19390 PF14850 DNA-binding domain of Proline dehydrogenase H4J00_RS19390 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H4J00_RS19430 PF00579 tRNA synthetases class I (W and Y) H4J00_RS19435 PF04225 Opacity-associated protein A LysM-like domain H4J00_RS19435 PF01551 Peptidase family M23 H4J00_RS19440 PF03702 Anhydro-N-acetylmuramic acid kinase H4J00_RS19450 PF07690 Major Facilitator Superfamily H4J00_RS19455 PF03372 Endonuclease/Exonuclease/phosphatase family H4J00_RS19490 PF07504 Fungalysin/Thermolysin Propeptide Motif H4J00_RS19490 PF01483 Proprotein convertase P-domain H4J00_RS19490 PF01447 Thermolysin metallopeptidase, catalytic domain H4J00_RS19490 PF02868 Thermolysin metallopeptidase, alpha-helical domain H4J00_RS19505 PF00361 Proton-conducting membrane transporter H4J00_RS19505 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus H4J00_RS19505 PF13244 Domain of unknown function (DUF4040) H4J00_RS19505 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter H4J00_RS19510 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L H4J00_RS19515 PF00361 Proton-conducting membrane transporter H4J00_RS19525 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) H4J00_RS19530 PF03334 Na+/H+ antiporter subunit H4J00_RS19540 PF04209 homogentisate 1,2-dioxygenase H4J00_RS19550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H4J00_RS19555 PF01047 MarR family H4J00_RS19565 PF00854 POT family H4J00_RS19570 PF03301 Tryptophan 2,3-dioxygenase H4J00_RS19580 PF00676 Dehydrogenase E1 component H4J00_RS19585 PF02780 Transketolase, C-terminal domain H4J00_RS19585 PF02779 Transketolase, pyrimidine binding domain H4J00_RS19595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H4J00_RS19595 PF00364 Biotin-requiring enzyme H4J00_RS19595 PF02817 e3 binding domain H4J00_RS19610 PF01609 Transposase DDE domain H4J00_RS19610 PF05598 Transposase domain (DUF772) H4J00_RS19615 PF00271 Helicase conserved C-terminal domain H4J00_RS19615 PF00270 DEAD/DEAH box helicase H4J00_RS19625 PF06903 VirK protein H4J00_RS19660 PF03377 TAL effector repeat H4J00_RS19665 PF13276 HTH-like domain H4J00_RS19665 PF13683 Integrase core domain H4J00_RS19685 PF00268 Ribonucleotide reductase, small chain H4J00_RS19690 PF03477 ATP cone domain H4J00_RS19690 PF02867 Ribonucleotide reductase, barrel domain H4J00_RS19690 PF00317 Ribonucleotide reductase, all-alpha domain H4J00_RS19700 PF13607 Succinyl-CoA ligase like flavodoxin domain H4J00_RS19700 PF00583 Acetyltransferase (GNAT) family H4J00_RS19700 PF13380 CoA binding domain H4J00_RS19710 PF00571 CBS domain H4J00_RS19710 PF01769 Divalent cation transporter H4J00_RS19710 PF03448 MgtE intracellular N domain H4J00_RS19715 PF00999 Sodium/hydrogen exchanger family H4J00_RS19715 PF02254 TrkA-N domain H4J00_RS19730 PF01609 Transposase DDE domain H4J00_RS19730 PF05598 Transposase domain (DUF772) H4J00_RS19745 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H4J00_RS19745 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H4J00_RS19750 PF00723 Glycosyl hydrolases family 15 H4J00_RS19765 PF05166 YcgL domain H4J00_RS19770 PF00109 Beta-ketoacyl synthase, N-terminal domain H4J00_RS19770 PF02801 Beta-ketoacyl synthase, C-terminal domain H4J00_RS19780 PF00535 Glycosyl transferase family 2 H4J00_RS19845 PF01553 Acyltransferase H4J00_RS19855 PF00550 Phosphopantetheine attachment site H4J00_RS19860 PF04820 Tryptophan halogenase H4J00_RS19900 PF01218 Coproporphyrinogen III oxidase H4J00_RS19915 PF01612 3'-5' exonuclease H4J00_RS19915 PF00476 DNA polymerase family A H4J00_RS19915 PF01367 5'-3' exonuclease, C-terminal SAM fold H4J00_RS19915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H4J00_RS19965 PF14602 Hexapeptide repeat of succinyl-transferase H4J00_RS19965 PF12464 Maltose acetyltransferase H4J00_RS19975 PF00580 UvrD/REP helicase N-terminal domain H4J00_RS19975 PF13361 UvrD-like helicase C-terminal domain H4J00_RS19990 PF13091 PLD-like domain H4J00_RS19990 PF13396 Phospholipase_D-nuclease N-terminal H4J00_RS19995 PF03466 LysR substrate binding domain H4J00_RS19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H4J00_RS20000 PF03737 Aldolase/RraA H4J00_RS20005 PF04303 PrpF protein H4J00_RS20010 PF04909 Amidohydrolase H4J00_RS20015 PF00471 Ribosomal protein L33 H4J00_RS20020 PF00830 Ribosomal L28 family H4J00_RS20035 PF02527 rRNA small subunit methyltransferase G H4J00_RS20040 PF09423 PhoD-like phosphatase H4J00_RS20040 PF16655 PhoD-like phosphatase, N-terminal domain H4J00_RS20045 PF09423 PhoD-like phosphatase H4J00_RS20045 PF16655 PhoD-like phosphatase, N-terminal domain H4J00_RS20050 PF01648 4'-phosphopantetheinyl transferase superfamily H4J00_RS20055 PF04226 Transglycosylase associated protein H4J00_RS20065 PF03372 Endonuclease/Exonuclease/phosphatase family H4J00_RS20080 PF00474 Sodium:solute symporter family H4J00_RS20085 PF04341 Protein of unknown function, DUF485 H4J00_RS20095 PF16177 Acetyl-coenzyme A synthetase N-terminus H4J00_RS20095 PF00501 AMP-binding enzyme H4J00_RS20095 PF13193 AMP-binding enzyme C-terminal domain H4J00_RS20100 PF00196 Bacterial regulatory proteins, luxR family H4J00_RS20100 PF00072 Response regulator receiver domain H4J00_RS20125 PF09339 IclR helix-turn-helix domain H4J00_RS20125 PF01614 Bacterial transcriptional regulator H4J00_RS20130 PF02659 Putative manganese efflux pump H4J00_RS20135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS20135 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS20145 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H4J00_RS20145 PF06165 Glycosyltransferase family 36 H4J00_RS20160 PF01011 PQQ enzyme repeat H4J00_RS20160 PF13360 PQQ-like domain H4J00_RS20160 PF13570 PQQ-like domain H4J00_RS20165 PF05598 Transposase domain (DUF772) H4J00_RS20165 PF01609 Transposase DDE domain H4J00_RS20180 PF01432 Peptidase family M3 H4J00_RS20200 PF00472 RF-1 domain H4J00_RS20210 PF00849 RNA pseudouridylate synthase H4J00_RS20225 PF03109 ABC1 family H4J00_RS20235 PF01820 D-ala D-ala ligase N-terminus H4J00_RS20235 PF07478 D-ala D-ala ligase C-terminus H4J00_RS20240 PF13936 Helix-turn-helix domain H4J00_RS20240 PF00665 Integrase core domain H4J00_RS20250 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family H4J00_RS20255 PF00501 AMP-binding enzyme H4J00_RS20260 PF03692 Putative zinc- or iron-chelating domain H4J00_RS20265 PF00561 alpha/beta hydrolase fold H4J00_RS20270 PF13784 Fic/DOC family N-terminal H4J00_RS20270 PF02661 Fic/DOC family H4J00_RS20275 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H4J00_RS20275 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H4J00_RS20290 PF00588 SpoU rRNA Methylase family H4J00_RS20295 PF07690 Major Facilitator Superfamily H4J00_RS20310 PF00072 Response regulator receiver domain H4J00_RS20310 PF00158 Sigma-54 interaction domain H4J00_RS20310 PF02954 Bacterial regulatory protein, Fis family H4J00_RS20315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS20315 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS20320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H4J00_RS20320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H4J00_RS20320 PF00205 Thiamine pyrophosphate enzyme, central domain H4J00_RS20330 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H4J00_RS20330 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H4J00_RS20335 PF02556 Preprotein translocase subunit SecB H4J00_RS20340 PF00581 Rhodanese-like domain H4J00_RS20385 PF01609 Transposase DDE domain H4J00_RS20385 PF05598 Transposase domain (DUF772) H4J00_RS20395 PF02803 Thiolase, C-terminal domain H4J00_RS20395 PF00108 Thiolase, N-terminal domain H4J00_RS20420 PF01609 Transposase DDE domain H4J00_RS20420 PF05598 Transposase domain (DUF772) H4J00_RS20425 PF05598 Transposase domain (DUF772) H4J00_RS20425 PF01609 Transposase DDE domain H4J00_RS20450 PF00080 Copper/zinc superoxide dismutase (SODC) H4J00_RS20455 PF00080 Copper/zinc superoxide dismutase (SODC) H4J00_RS20460 PF02954 Bacterial regulatory protein, Fis family H4J00_RS20460 PF00072 Response regulator receiver domain H4J00_RS20460 PF00158 Sigma-54 interaction domain H4J00_RS20465 PF00512 His Kinase A (phospho-acceptor) domain H4J00_RS20465 PF00989 PAS fold H4J00_RS20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H4J00_RS20470 PF00909 Ammonium Transporter Family H4J00_RS20475 PF00543 Nitrogen regulatory protein P-II H4J00_RS20480 PF03951 Glutamine synthetase, beta-Grasp domain H4J00_RS20480 PF00120 Glutamine synthetase, catalytic domain H4J00_RS20485 PF02673 Bacitracin resistance protein BacA H4J00_RS20525 PF03061 Thioesterase superfamily H4J00_RS20530 PF13091 PLD-like domain H4J00_RS20545 PF10609 NUBPL iron-transfer P-loop NTPase H4J00_RS20545 PF01883 Iron-sulfur cluster assembly protein H4J00_RS20565 PF01381 Helix-turn-helix H4J00_RS20570 PF07804 HipA-like C-terminal domain H4J00_RS20570 PF13657 HipA N-terminal domain H4J00_RS20575 PF10017 Histidine-specific methyltransferase, SAM-dependent H4J00_RS20580 PF03781 Sulfatase-modifying factor enzyme 1 H4J00_RS20580 PF12867 DinB superfamily H4J00_RS20590 PF00528 Binding-protein-dependent transport system inner membrane component H4J00_RS20595 PF00571 CBS domain H4J00_RS20595 PF00005 ABC transporter H4J00_RS20610 PF00005 ABC transporter H4J00_RS20620 PF01546 Peptidase family M20/M25/M40 H4J00_RS20620 PF07687 Peptidase dimerisation domain H4J00_RS20625 PF01734 Patatin-like phospholipase H4J00_RS20635 PF01037 Lrp/AsnC ligand binding domain H4J00_RS20640 PF00351 Biopterin-dependent aromatic amino acid hydroxylase H4J00_RS20655 PF00657 GDSL-like Lipase/Acylhydrolase H4J00_RS20665 PF00356 Bacterial regulatory proteins, lacI family H4J00_RS20685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H4J00_RS20685 PF02806 Alpha amylase, C-terminal all-beta domain H4J00_RS20685 PF00128 Alpha amylase, catalytic domain H4J00_RS20690 PF16657 Maltogenic Amylase, C-terminal domain H4J00_RS20690 PF00128 Alpha amylase, catalytic domain H4J00_RS20695 PF00128 Alpha amylase, catalytic domain H4J00_RS20695 PF11896 Domain of unknown function (DUF3416) H4J00_RS20705 PF08479 POTRA domain, ShlB-type H4J00_RS20705 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB H4J00_RS20705 PF17287 POTRA domain H4J00_RS20710 PF04829 Pre-toxin domain with VENN motif H4J00_RS20710 PF05860 haemagglutination activity domain H4J00_RS20710 PF13332 Hemagglutinin repeat H4J00_RS20710 PF13018 Extended Signal Peptide of Type V secretion system H4J00_RS20715 PF08845 Toxin SymE, type I toxin-antitoxin system H4J00_RS20720 PF04829 Pre-toxin domain with VENN motif H4J00_RS20720 PF13018 Extended Signal Peptide of Type V secretion system H4J00_RS20720 PF13332 Hemagglutinin repeat H4J00_RS20720 PF05860 haemagglutination activity domain H4J00_RS20760 PF03594 Benzoate membrane transport protein H4J00_RS20765 PF13426 PAS domain H4J00_RS20765 PF00360 Phytochrome region H4J00_RS20765 PF01590 GAF domain H4J00_RS20765 PF08446 PAS fold H4J00_RS20770 PF01126 Heme oxygenase H4J00_RS20775 PF07690 Major Facilitator Superfamily H4J00_RS20780 PF01263 Aldose 1-epimerase H4J00_RS20795 PF02810 SEC-C motif H4J00_RS20835 PF01227 GTP cyclohydrolase I H4J00_RS20865 PF00083 Sugar (and other) transporter H4J00_RS20935 PF05532 CsbD-like H4J00_RS20955 PF02868 Thermolysin metallopeptidase, alpha-helical domain H4J00_RS20955 PF16485 Protealysin propeptide H4J00_RS20955 PF01447 Thermolysin metallopeptidase, catalytic domain H4J00_RS20965 PF00293 NUDIX domain H4J00_RS20965 PF13344 Haloacid dehalogenase-like hydrolase H4J00_RS20995 PF00083 Sugar (and other) transporter H4J00_RS20995 PF08946 Osmosensory transporter coiled coil H4J00_RS21025 PF00294 pfkB family carbohydrate kinase H4J00_RS21035 PF12241 Trans-2-enoyl-CoA reductase catalytic region H4J00_RS21035 PF07055 Enoyl reductase FAD binding domain H4J00_RS21035 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H4J00_RS21055 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family H4J00_RS21060 PF01070 FMN-dependent dehydrogenase H4J00_RS21065 PF05598 Transposase domain (DUF772) H4J00_RS21065 PF01609 Transposase DDE domain H4J00_RS21075 PF07715 TonB-dependent Receptor Plug Domain H4J00_RS21075 PF00593 TonB dependent receptor H4J00_RS21080 PF00155 Aminotransferase class I and II H4J00_RS21085 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H4J00_RS21110 PF03006 Haemolysin-III related H4J00_RS21115 PF09369 Domain of unknown function (DUF1998) H4J00_RS21115 PF00271 Helicase conserved C-terminal domain H4J00_RS21115 PF00270 DEAD/DEAH box helicase H4J00_RS21175 PF00310 Glutamine amidotransferases class-II H4J00_RS21175 PF04898 Glutamate synthase central domain H4J00_RS21175 PF01645 Conserved region in glutamate synthase H4J00_RS21175 PF01493 GXGXG motif H4J00_RS21180 PF07992 Pyridine nucleotide-disulphide oxidoreductase H4J00_RS21180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H4J00_RS21190 PF13520 Amino acid permease H4J00_RS21200 PF02646 RmuC family H4J00_RS21210 PF00255 Glutathione peroxidase H4J00_RS21215 PF04333 MlaA lipoprotein H4J00_RS21225 PF05494 MlaC protein H4J00_RS21230 PF02470 MlaD protein H4J00_RS21235 PF02405 Permease MlaE H4J00_RS21240 PF00005 ABC transporter H4J00_RS21275 PF17946 RecC C-terminal domain H4J00_RS21280 PF13361 UvrD-like helicase C-terminal domain H4J00_RS21280 PF00580 UvrD/REP helicase N-terminal domain H4J00_RS21280 PF12705 PD-(D/E)XK nuclease superfamily H4J00_RS21285 PF13538 UvrD-like helicase C-terminal domain H4J00_RS21295 PF01381 Helix-turn-helix H4J00_RS21345 PF00665 Integrase core domain H4J00_RS21345 PF13936 Helix-turn-helix domain H4J00_RS21365 PF01609 Transposase DDE domain H4J00_RS21365 PF05598 Transposase domain (DUF772) H4J00_RS21370 PF00067 Cytochrome P450 H4J00_RS21375 PF00067 Cytochrome P450 H4J00_RS21380 PF00067 Cytochrome P450 H4J00_RS21395 PF00067 Cytochrome P450 H4J00_RS21400 PF00348 Polyprenyl synthetase H4J00_RS21415 PF01070 FMN-dependent dehydrogenase H4J00_RS21430 PF00849 RNA pseudouridylate synthase H4J00_RS21455 PF00990 Diguanylate cyclase, GGDEF domain H4J00_RS21465 PF02595 Glycerate kinase family H4J00_RS21470 PF07690 Major Facilitator Superfamily H4J00_RS21490 PF10672 S-adenosylmethionine-dependent methyltransferase H4J00_RS21490 PF17785 PUA-like domain H4J00_RS21495 PF03741 Integral membrane protein TerC family H4J00_RS21500 PF01694 Rhomboid family H4J00_RS21505 PF03009 Glycerophosphoryl diester phosphodiesterase family H4J00_RS21515 PF01569 PAP2 superfamily H4J00_RS21520 PF01926 50S ribosome-binding GTPase H4J00_RS21520 PF12631 MnmE helical domain H4J00_RS21520 PF10396 GTP-binding protein TrmE N-terminus H4J00_RS21525 PF01522 Polysaccharide deacetylase H4J00_RS21530 PF02096 60Kd inner membrane protein H4J00_RS21530 PF14849 YidC periplasmic domain H4J00_RS21535 PF00825 Ribonuclease P H4J00_RS21540 PF00468 Ribosomal protein L34