BJD13_RS00605	SM00155	Phospholipase D. Active site motifs.
BJD13_RS00625	SM00138	Methyltransferase, chemotaxis proteins 
BJD13_RS00645	SM00487	DEAD-like helicases superfamily
BJD13_RS00645	SM01058	CarD-like/TRCF domain
BJD13_RS00920	SM00091	PAS domain
BJD13_RS01595	SM00422	helix_turn_helix, mercury resistance
BJD13_RS01630	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BJD13_RS01645	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS01690	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS01710	SM00656	BJD13_RS01710
BJD13_RS01740	SM00924	MgtE intracellular N domain
BJD13_RS01790	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS01810	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS01900	SM00054	EF-hand, calcium binding motif
BJD13_RS01930	SM00671	Sel1-like repeats.
BJD13_RS01935	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BJD13_RS01965	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS01980	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
BJD13_RS02010	SM00411	bacterial (prokaryotic) histone like domain
BJD13_RS02025	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS02065	SM00732	Likely ribonuclease with RNase H fold.
BJD13_RS02135	SM00267	diguanylate cyclase
BJD13_RS02140	SM00829	Enoylreductase
BJD13_RS02150	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BJD13_RS02155	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJD13_RS02185	SM00248	ankyrin repeats
BJD13_RS02245	SM00855	Phosphoglycerate mutase family
BJD13_RS02260	SM00155	Phospholipase D. Active site motifs.
BJD13_RS02265	SM00448	cheY-homologous receiver domain
BJD13_RS02270	SM00138	Methyltransferase, chemotaxis proteins 
BJD13_RS02275	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS02275	SM00448	cheY-homologous receiver domain
BJD13_RS02280	SM00260	Two component signalling adaptor domain
BJD13_RS02285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS02285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS02295	SM00073	Histidine Phosphotransfer domain
BJD13_RS02295	SM00260	Two component signalling adaptor domain
BJD13_RS02295	SM00387	Histidine kinase-like ATPases
BJD13_RS02295	SM01231	BJD13_RS02295
BJD13_RS02305	SM00487	DEAD-like helicases superfamily
BJD13_RS02305	SM00490	helicase superfamily c-terminal domain
BJD13_RS02305	SM00982	BJD13_RS02305
BJD13_RS02305	SM01058	CarD-like/TRCF domain
BJD13_RS02320	SM00448	cheY-homologous receiver domain
BJD13_RS02320	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS02325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS02325	SM00387	Histidine kinase-like ATPases
BJD13_RS02325	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS02330	SM00645	Papain family cysteine protease
BJD13_RS02405	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS02490	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS02490	SM00478	endonuclease III
BJD13_RS02490	SM01009	AlkA N-terminal domain
BJD13_RS02540	SM00487	DEAD-like helicases superfamily
BJD13_RS02540	SM00490	helicase superfamily c-terminal domain
BJD13_RS02545	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS02545	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS02545	SM00091	PAS domain
BJD13_RS02545	SM00267	diguanylate cyclase
BJD13_RS02550	SM00363	S4 RNA-binding domain
BJD13_RS02555	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS02555	SM00267	diguanylate cyclase
BJD13_RS02590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS02590	SM00387	Histidine kinase-like ATPases
BJD13_RS02590	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS02595	SM00448	cheY-homologous receiver domain
BJD13_RS02595	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS02630	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS02765	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS02800	SM01351	BJD13_RS02800
BJD13_RS02815	SM00977	TilS substrate C-terminal domain
BJD13_RS02825	SM00098	Alkaline phosphatase homologues
BJD13_RS02880	SM01160	BJD13_RS02880
BJD13_RS02960	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS02995	SM00257	Lysin motif
BJD13_RS03025	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BJD13_RS03090	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS03090	SM00267	diguanylate cyclase
BJD13_RS03090	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS03105	SM00822	BJD13_RS03105
BJD13_RS03150	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
BJD13_RS03155	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
BJD13_RS03205	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS03205	SM00322	K homology RNA-binding domain
BJD13_RS03225	SM01387	BJD13_RS03225
BJD13_RS03230	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS03230	SM00322	K homology RNA-binding domain
BJD13_RS03250	SM01001	AIR carboxylase
BJD13_RS03335	SM00487	DEAD-like helicases superfamily
BJD13_RS03335	SM00490	helicase superfamily c-terminal domain
BJD13_RS03400	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS03465	SM00642	Alpha-amylase domain
BJD13_RS03495	SM00642	Alpha-amylase domain
BJD13_RS03500	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS03505	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BJD13_RS03530	SM00873	B3/4 domain
BJD13_RS03530	SM00874	tRNA synthetase B5 domain
BJD13_RS03530	SM00896	Ferredoxin-fold anticodon binding domain
BJD13_RS03535	SM00411	bacterial (prokaryotic) histone like domain
BJD13_RS03540	SM00422	helix_turn_helix, mercury resistance
BJD13_RS03625	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS03650	SM00861	Transketolase, pyrimidine binding domain
BJD13_RS03655	SM00507	HNH nucleases
BJD13_RS03685	SM00465	GIY-YIG type nucleases (URI domain)
BJD13_RS03700	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS03700	SM00091	PAS domain
BJD13_RS03700	SM00387	Histidine kinase-like ATPases
BJD13_RS03700	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS03700	SM00448	cheY-homologous receiver domain
BJD13_RS03715	SM00478	endonuclease III
BJD13_RS03725	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS03725	SM00962	SRP54-type protein, GTPase domain
BJD13_RS03725	SM00963	SRP54-type protein, helical bundle domain
BJD13_RS03730	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS03755	SM01130	BJD13_RS03755
BJD13_RS03800	SM00944	Pro-kumamolisin, activation domain
BJD13_RS03850	SM00387	Histidine kinase-like ATPases
BJD13_RS03920	SM00344	helix_turn_helix ASNC type
BJD13_RS03935	SM01323	BJD13_RS03935
BJD13_RS04010	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS04040	SM00448	cheY-homologous receiver domain
BJD13_RS04040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS04045	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS04045	SM00091	PAS domain
BJD13_RS04045	SM00387	Histidine kinase-like ATPases
BJD13_RS04045	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS04045	SM00448	cheY-homologous receiver domain
BJD13_RS04045	SM01079	BJD13_RS04045
BJD13_RS04100	SM00267	diguanylate cyclase
BJD13_RS04100	SM00448	cheY-homologous receiver domain
BJD13_RS04110	SM01230	BJD13_RS04110
BJD13_RS04120	SM01230	BJD13_RS04120
BJD13_RS04150	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS04185	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS04185	SM01091	Transporter associated domain
BJD13_RS04210	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS04275	SM00487	DEAD-like helicases superfamily
BJD13_RS04275	SM00490	helicase superfamily c-terminal domain
BJD13_RS04285	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS04285	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS04290	SM00260	Two component signalling adaptor domain
BJD13_RS04295	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS04295	SM00267	diguanylate cyclase
BJD13_RS04305	SM00528	Domain in histone-like proteins of HNS family
BJD13_RS04320	SM00474	3'-5' exonuclease
BJD13_RS04370	SM00646	BJD13_RS04370
BJD13_RS04375	SM00853	MutL C terminal dimerisation domain
BJD13_RS04375	SM01340	BJD13_RS04375
BJD13_RS04400	SM00822	BJD13_RS04400
BJD13_RS04415	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS04415	SM00267	diguanylate cyclase
BJD13_RS04425	SM01322	BJD13_RS04425
BJD13_RS04430	SM00357	Cold shock protein domain
BJD13_RS04455	SM00487	DEAD-like helicases superfamily
BJD13_RS04455	SM00490	helicase superfamily c-terminal domain
BJD13_RS04460	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS04495	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS04495	SM00267	diguanylate cyclase
BJD13_RS04495	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS04505	SM00841	Elongation factor P, C-terminal
BJD13_RS04505	SM01185	BJD13_RS04505
BJD13_RS04550	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS04595	SM01234	BJD13_RS04595
BJD13_RS04615	SM00840	BJD13_RS04615
BJD13_RS04655	SM00859	Semialdehyde dehydrogenase, NAD binding domain
BJD13_RS04670	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
BJD13_RS04685	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BJD13_RS04715	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS04720	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS04725	SM00357	Cold shock protein domain
BJD13_RS04775	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS04800	SM00363	S4 RNA-binding domain
BJD13_RS04825	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS04900	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS04905	SM00411	bacterial (prokaryotic) histone like domain
BJD13_RS04915	SM00028	Tetratricopeptide repeats
BJD13_RS04925	SM00822	BJD13_RS04925
BJD13_RS04950	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS04950	SM01240	BJD13_RS04950
BJD13_RS04960	SM00829	Enoylreductase
BJD13_RS05025	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS05045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS05050	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS05050	SM00448	cheY-homologous receiver domain
BJD13_RS05055	SM00387	Histidine kinase-like ATPases
BJD13_RS05060	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS05105	SM00529	Helix-turn-helix diphteria tox regulatory element
BJD13_RS05115	SM00479	BJD13_RS05115
BJD13_RS05185	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS05185	SM00732	Likely ribonuclease with RNase H fold.
BJD13_RS05190	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS05190	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS05190	SM00091	PAS domain
BJD13_RS05190	SM00387	Histidine kinase-like ATPases
BJD13_RS05190	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS05190	SM00448	cheY-homologous receiver domain
BJD13_RS05195	SM00448	cheY-homologous receiver domain
BJD13_RS05285	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS05340	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS05350	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS05365	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS05380	SM00226	Low molecular weight phosphatase family
BJD13_RS05390	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJD13_RS05390	SM00465	GIY-YIG type nucleases (URI domain)
BJD13_RS05430	SM00507	HNH nucleases
BJD13_RS05470	SM00984	UDP binding domain
BJD13_RS05490	SM00450	Rhodanese Homology Domain
BJD13_RS05495	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS05495	SM00448	cheY-homologous receiver domain
BJD13_RS05500	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS05505	SM00363	S4 RNA-binding domain
BJD13_RS05575	SM01034	Sensors of blue-light using FAD
BJD13_RS05640	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS05645	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJD13_RS05720	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS05770	SM00387	Histidine kinase-like ATPases
BJD13_RS05780	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS05780	SM00448	cheY-homologous receiver domain
BJD13_RS05790	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS05810	SM00448	cheY-homologous receiver domain
BJD13_RS05810	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS05820	SM00387	Histidine kinase-like ATPases
BJD13_RS05850	SM00331	Sigma factor PP2C-like phosphatases
BJD13_RS05850	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BJD13_RS05875	SM00240	Forkhead associated domain
BJD13_RS05910	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS05910	SM01086	C-terminal, D2-small domain, of ClpB protein
BJD13_RS06005	SM00869	Autotransporter beta-domain
BJD13_RS06030	SM00387	Histidine kinase-like ATPases
BJD13_RS06030	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS06035	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS06035	SM00448	cheY-homologous receiver domain
BJD13_RS06040	SM00869	Autotransporter beta-domain
BJD13_RS06045	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS06080	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
BJD13_RS06105	SM00448	cheY-homologous receiver domain
BJD13_RS06105	SM01012	BJD13_RS06105
BJD13_RS06120	SM00822	BJD13_RS06120
BJD13_RS06125	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS06140	SM00852	Probable molybdopterin binding domain
BJD13_RS06195	SM00450	Rhodanese Homology Domain
BJD13_RS06200	SM00852	Probable molybdopterin binding domain
BJD13_RS06205	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06210	SM00564	beta-propeller repeat
BJD13_RS06225	SM00028	Tetratricopeptide repeats
BJD13_RS06235	SM00562	BJD13_RS06235
BJD13_RS06260	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06285	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06285	SM00843	BJD13_RS06285
BJD13_RS06310	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS06315	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06315	SM01086	C-terminal, D2-small domain, of ClpB protein
BJD13_RS06340	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06355	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS06355	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS06355	SM00091	PAS domain
BJD13_RS06355	SM00267	diguanylate cyclase
BJD13_RS06360	SM00091	PAS domain
BJD13_RS06360	SM00387	Histidine kinase-like ATPases
BJD13_RS06365	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS06365	SM00267	diguanylate cyclase
BJD13_RS06365	SM00448	cheY-homologous receiver domain
BJD13_RS06370	SM00387	Histidine kinase-like ATPases
BJD13_RS06385	SM00858	BJD13_RS06385
BJD13_RS06390	SM00260	Two component signalling adaptor domain
BJD13_RS06390	SM00448	cheY-homologous receiver domain
BJD13_RS06440	SM00047	Lysozyme subfamily 2
BJD13_RS06480	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS06480	SM00448	cheY-homologous receiver domain
BJD13_RS06490	SM00448	cheY-homologous receiver domain
BJD13_RS06495	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06515	SM00822	BJD13_RS06515
BJD13_RS06520	SM00822	BJD13_RS06520
BJD13_RS06575	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06630	SM00267	diguanylate cyclase
BJD13_RS06640	SM00267	diguanylate cyclase
BJD13_RS06645	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS06645	SM00267	diguanylate cyclase
BJD13_RS06660	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS06660	SM00962	SRP54-type protein, GTPase domain
BJD13_RS06675	SM00448	cheY-homologous receiver domain
BJD13_RS06685	SM00073	Histidine Phosphotransfer domain
BJD13_RS06685	SM00260	Two component signalling adaptor domain
BJD13_RS06685	SM00387	Histidine kinase-like ATPases
BJD13_RS06685	SM01231	BJD13_RS06685
BJD13_RS06710	SM00260	Two component signalling adaptor domain
BJD13_RS06710	SM00387	Histidine kinase-like ATPases
BJD13_RS06785	SM00260	Two component signalling adaptor domain
BJD13_RS06795	SM00448	cheY-homologous receiver domain
BJD13_RS06800	SM00073	Histidine Phosphotransfer domain
BJD13_RS06800	SM00260	Two component signalling adaptor domain
BJD13_RS06800	SM00387	Histidine kinase-like ATPases
BJD13_RS06800	SM01231	BJD13_RS06800
BJD13_RS06805	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06810	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06810	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06820	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06820	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06820	SM01049	BJD13_RS06820
BJD13_RS06825	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06825	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06840	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06845	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06845	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06850	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06850	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06860	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06865	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06865	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06870	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06870	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06875	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06875	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06880	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06880	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06895	SM00260	Two component signalling adaptor domain
BJD13_RS06905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS06905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS06910	SM00138	Methyltransferase, chemotaxis proteins 
BJD13_RS06920	SM00448	cheY-homologous receiver domain
BJD13_RS06925	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS06925	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS06925	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS06925	SM00091	PAS domain
BJD13_RS06925	SM00267	diguanylate cyclase
BJD13_RS06945	SM00966	SpoVT / AbrB like domain 
BJD13_RS06970	SM00073	Histidine Phosphotransfer domain
BJD13_RS06970	SM00387	Histidine kinase-like ATPases
BJD13_RS06970	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS06970	SM00448	cheY-homologous receiver domain
BJD13_RS06980	SM00448	cheY-homologous receiver domain
BJD13_RS06980	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS06990	SM00937	BJD13_RS06990
BJD13_RS06995	SM00850	LytTr DNA-binding domain
BJD13_RS07020	SM00851	MGS-like domain
BJD13_RS07020	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
BJD13_RS07030	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
BJD13_RS07070	SM00899	BJD13_RS07070
BJD13_RS07090	SM00822	BJD13_RS07090
BJD13_RS07095	SM00841	Elongation factor P, C-terminal
BJD13_RS07095	SM01185	BJD13_RS07095
BJD13_RS07140	SM01007	Class II Aldolase and Adducin N-terminal domain
BJD13_RS07215	SM00100	Cyclic nucleotide-monophosphate binding domain
BJD13_RS07215	SM00419	helix_turn_helix, cAMP Regulatory protein
BJD13_RS07275	SM00912	haemagglutination activity domain
BJD13_RS07285	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS07285	SM00871	Bacterial transcription activator, effector binding domain
BJD13_RS07365	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS07390	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS07465	SM00248	ankyrin repeats
BJD13_RS07495	SM00477	DNA/RNA non-specific endonuclease
BJD13_RS07495	SM00892	DNA/RNA non-specific endonuclease
BJD13_RS07555	SM00014	Acid phosphatase homologues
BJD13_RS07570	SM00387	Histidine kinase-like ATPases
BJD13_RS07575	SM00448	cheY-homologous receiver domain
BJD13_RS07585	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS07585	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS07585	SM00267	diguanylate cyclase
BJD13_RS07665	SM00646	BJD13_RS07665
BJD13_RS07700	SM00758	BJD13_RS07700
BJD13_RS07745	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BJD13_RS07770	SM01130	BJD13_RS07770
BJD13_RS07790	SM00670	Large family of predicted nucleotide-binding domains
BJD13_RS07840	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS07840	SM00091	PAS domain
BJD13_RS07840	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS07860	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
BJD13_RS07875	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS07915	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS07925	SM01103	BJD13_RS07925
BJD13_RS07935	SM00257	Lysin motif
BJD13_RS07955	SM00463	Small MutS-related domain
BJD13_RS07980	SM01192	BJD13_RS07980
BJD13_RS07980	SM01193	BJD13_RS07980
BJD13_RS08005	SM00387	Histidine kinase-like ATPases
BJD13_RS08005	SM00433	TopoisomeraseII
BJD13_RS08035	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS08035	SM01091	Transporter associated domain
BJD13_RS08060	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS08070	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS08230	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS08230	SM00091	PAS domain
BJD13_RS08230	SM00387	Histidine kinase-like ATPases
BJD13_RS08230	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS08230	SM00448	cheY-homologous receiver domain
BJD13_RS08235	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS08245	SM00448	cheY-homologous receiver domain
BJD13_RS08250	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS08250	SM00091	PAS domain
BJD13_RS08250	SM00387	Histidine kinase-like ATPases
BJD13_RS08250	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS08250	SM00448	cheY-homologous receiver domain
BJD13_RS08255	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS08265	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS08265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS08310	SM00830	Chorismate mutase type II
BJD13_RS08330	SM00240	Forkhead associated domain
BJD13_RS08350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJD13_RS08350	SM00866	BJD13_RS08350
BJD13_RS08390	SM00564	beta-propeller repeat
BJD13_RS08395	SM00434	DNA Topoisomerase IV
BJD13_RS08420	SM00292	breast cancer carboxy-terminal domain
BJD13_RS08420	SM00532	Ligase N family
BJD13_RS08435	SM00771	ZipA, C-terminal domain (FtsZ-binding)
BJD13_RS08440	SM00968	SMC proteins Flexible Hinge Domain
BJD13_RS08495	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS08495	SM00448	cheY-homologous receiver domain
BJD13_RS08540	SM00947	Carbonic anhydrase
BJD13_RS08570	SM00479	BJD13_RS08570
BJD13_RS08600	SM00981	BJD13_RS08600
BJD13_RS08630	SM00644	BJD13_RS08630
BJD13_RS08640	SM00450	Rhodanese Homology Domain
BJD13_RS08665	SM00478	endonuclease III
BJD13_RS08675	SM00947	Carbonic anhydrase
BJD13_RS08710	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS08725	SM00479	BJD13_RS08725
BJD13_RS08730	SM00267	diguanylate cyclase
BJD13_RS08740	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BJD13_RS08750	SM00316	Ribosomal protein S1-like RNA-binding domain
BJD13_RS08750	SM00357	Cold shock protein domain
BJD13_RS08750	SM00955	BJD13_RS08750
BJD13_RS08785	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
BJD13_RS08795	SM01018	B12 binding domain
BJD13_RS08815	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS08835	SM00984	UDP binding domain
BJD13_RS08855	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJD13_RS08860	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS08890	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS08890	SM01091	Transporter associated domain
BJD13_RS08910	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BJD13_RS08920	SM00861	Transketolase, pyrimidine binding domain
BJD13_RS08945	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS08985	SM00271	DnaJ molecular chaperone homology domain
BJD13_RS09065	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS09065	SM00267	diguanylate cyclase
BJD13_RS09075	SM00267	diguanylate cyclase
BJD13_RS09195	SM00357	Cold shock protein domain
BJD13_RS09215	SM00947	Carbonic anhydrase
BJD13_RS09230	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS09250	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS09280	SM00631	BJD13_RS09280
BJD13_RS09285	SM01217	BJD13_RS09285
BJD13_RS09320	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS09325	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS09330	SM00434	DNA Topoisomerase IV
BJD13_RS09355	SM00710	Parallel beta-helix repeats
BJD13_RS09355	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
BJD13_RS09360	SM01172	BJD13_RS09360
BJD13_RS09380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS09390	SM00972	Spore Coat Protein U domain
BJD13_RS09405	SM00972	Spore Coat Protein U domain
BJD13_RS09430	SM00267	diguanylate cyclase
BJD13_RS09460	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJD13_RS09500	SM00481	DNA polymerase alpha chain like domain
BJD13_RS09800	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
BJD13_RS09805	SM00869	Autotransporter beta-domain
BJD13_RS09825	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS09825	SM00267	diguanylate cyclase
BJD13_RS09860	SM00487	DEAD-like helicases superfamily
BJD13_RS09860	SM00490	helicase superfamily c-terminal domain
BJD13_RS09875	SM00357	Cold shock protein domain
BJD13_RS09910	SM01118	BJD13_RS09910
BJD13_RS09920	SM00448	cheY-homologous receiver domain
BJD13_RS09940	SM00358	Double-stranded RNA binding motif
BJD13_RS09940	SM00535	Ribonuclease III family
BJD13_RS09955	SM00838	Elongation factor G C-terminus
BJD13_RS09960	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJD13_RS10010	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS10035	SM00812	Alpha-L-fucosidase
BJD13_RS10040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS10040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS10075	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
BJD13_RS10075	SM00534	ATPase domain of DNA mismatch repair MUTS family
BJD13_RS10090	SM00363	S4 RNA-binding domain
BJD13_RS10140	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS10140	SM00962	SRP54-type protein, GTPase domain
BJD13_RS10140	SM00963	SRP54-type protein, helical bundle domain
BJD13_RS10160	SM00813	Alpha-L-arabinofuranosidase C-terminus
BJD13_RS10165	SM00448	cheY-homologous receiver domain
BJD13_RS10170	SM00091	PAS domain
BJD13_RS10170	SM00387	Histidine kinase-like ATPases
BJD13_RS10170	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS10175	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS10175	SM00387	Histidine kinase-like ATPases
BJD13_RS10175	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS10175	SM00448	cheY-homologous receiver domain
BJD13_RS10180	SM00138	Methyltransferase, chemotaxis proteins 
BJD13_RS10190	SM00387	Histidine kinase-like ATPases
BJD13_RS10190	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS10190	SM00448	cheY-homologous receiver domain
BJD13_RS10215	SM00387	Histidine kinase-like ATPases
BJD13_RS10215	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS10215	SM00448	cheY-homologous receiver domain
BJD13_RS10220	SM00387	Histidine kinase-like ATPases
BJD13_RS10220	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS10230	SM00387	Histidine kinase-like ATPases
BJD13_RS10255	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS10260	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS10270	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS10275	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJD13_RS10320	SM00904	Riboflavin kinase
BJD13_RS10420	SM00244	prohibitin homologues
BJD13_RS10440	SM00478	endonuclease III
BJD13_RS10455	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS10455	SM00448	cheY-homologous receiver domain
BJD13_RS10495	SM00387	Histidine kinase-like ATPases
BJD13_RS10495	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS10500	SM00448	cheY-homologous receiver domain
BJD13_RS10500	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS10540	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS10575	SM01060	BJD13_RS10575
BJD13_RS10600	SM00091	PAS domain
BJD13_RS10600	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS10640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS10655	SM00481	DNA polymerase alpha chain like domain
BJD13_RS10675	SM00966	SpoVT / AbrB like domain 
BJD13_RS10695	SM00974	BJD13_RS10695
BJD13_RS10710	SM01092	CO dehydrogenase flavoprotein C-terminal domain
BJD13_RS10715	SM01008	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
BJD13_RS10725	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS10730	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS10785	SM00855	Phosphoglycerate mutase family
BJD13_RS10805	SM00220	Serine/Threonine protein kinases, catalytic domain
BJD13_RS10825	SM00487	DEAD-like helicases superfamily
BJD13_RS10825	SM00490	helicase superfamily c-terminal domain
BJD13_RS10860	SM00822	BJD13_RS10860
BJD13_RS10875	SM00788	Adenylosuccinate synthetase
BJD13_RS10880	SM01321	BJD13_RS10880
BJD13_RS10885	SM00244	prohibitin homologues
BJD13_RS10890	SM00244	prohibitin homologues
BJD13_RS10895	SM00448	cheY-homologous receiver domain
BJD13_RS10900	SM00271	DnaJ molecular chaperone homology domain
BJD13_RS10940	SM01359	BJD13_RS10940
BJD13_RS10940	SM01360	BJD13_RS10940
BJD13_RS10985	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS11025	SM00825	Beta-ketoacyl synthase
BJD13_RS11035	SM00822	BJD13_RS11035
BJD13_RS11040	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BJD13_RS11080	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS11090	SM00460	Transglutaminase/protease-like homologues
BJD13_RS11105	SM00493	BJD13_RS11105
BJD13_RS11115	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS11130	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS11225	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS11260	SM00100	Cyclic nucleotide-monophosphate binding domain
BJD13_RS11295	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS11300	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS11320	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS11340	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS11370	SM00331	Sigma factor PP2C-like phosphatases
BJD13_RS11370	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BJD13_RS11375	SM00479	BJD13_RS11375
BJD13_RS11390	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS11395	SM00257	Lysin motif
BJD13_RS11420	SM00411	bacterial (prokaryotic) histone like domain
BJD13_RS11425	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS11425	SM00464	Found in ATP-dependent protease La (LON)
BJD13_RS11430	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS11430	SM00994	ClpX C4-type zinc finger
BJD13_RS11430	SM01086	C-terminal, D2-small domain, of ClpB protein
BJD13_RS11450	SM00091	PAS domain
BJD13_RS11450	SM00387	Histidine kinase-like ATPases
BJD13_RS11480	SM01329	BJD13_RS11480
BJD13_RS11500	SM00448	cheY-homologous receiver domain
BJD13_RS11500	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS11505	SM00091	PAS domain
BJD13_RS11505	SM00387	Histidine kinase-like ATPases
BJD13_RS11505	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS11525	SM00014	Acid phosphatase homologues
BJD13_RS11575	SM00855	Phosphoglycerate mutase family
BJD13_RS11595	SM00829	Enoylreductase
BJD13_RS11610	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS11655	SM00829	Enoylreductase
BJD13_RS11695	SM00838	Elongation factor G C-terminus
BJD13_RS11745	SM00662	RNA polymerases D
BJD13_RS11750	SM00363	S4 RNA-binding domain
BJD13_RS11750	SM01390	BJD13_RS11750
BJD13_RS11810	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BJD13_RS11815	SM01374	BJD13_RS11815
BJD13_RS11835	SM00322	K homology RNA-binding domain
BJD13_RS11850	SM01382	BJD13_RS11850
BJD13_RS11850	SM01383	BJD13_RS11850
BJD13_RS11870	SM01403	BJD13_RS11870
BJD13_RS11890	SM00838	Elongation factor G C-terminus
BJD13_RS11890	SM00889	Elongation factor G, domain IV
BJD13_RS11905	SM00663	RNA polymerase I subunit A N-terminus
BJD13_RS11930	SM00649	Ribosomal protein L11/L12
BJD13_RS11935	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
BJD13_RS11935	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
BJD13_RS11985	SM01400	BJD13_RS11985
BJD13_RS12005	SM00028	Tetratricopeptide repeats
BJD13_RS12015	SM00937	BJD13_RS12015
BJD13_RS12020	SM00028	Tetratricopeptide repeats
BJD13_RS12030	SM00852	Probable molybdopterin binding domain
BJD13_RS12140	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
BJD13_RS12140	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
BJD13_RS12155	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BJD13_RS12155	SM00475	5'-3' exonuclease
BJD13_RS12225	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS12230	SM00387	Histidine kinase-like ATPases
BJD13_RS12230	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS12230	SM00448	cheY-homologous receiver domain
BJD13_RS12235	SM00448	cheY-homologous receiver domain
BJD13_RS12310	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS12345	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJD13_RS12345	SM00895	BJD13_RS12345
BJD13_RS12410	SM00650	Ribosomal RNA adenine dimethylases
BJD13_RS12470	SM00387	Histidine kinase-like ATPases
BJD13_RS12470	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS12475	SM00448	cheY-homologous receiver domain
BJD13_RS12475	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS12485	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS12505	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS12630	SM00996	S-adenosyl-L-homocysteine hydrolase
BJD13_RS12630	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
BJD13_RS12665	SM00642	Alpha-amylase domain
BJD13_RS12680	SM00944	Pro-kumamolisin, activation domain
BJD13_RS12685	SM00829	Enoylreductase
BJD13_RS12715	SM00957	SecA DEAD-like domain
BJD13_RS12715	SM00958	SecA preprotein cross-linking domain
BJD13_RS12735	SM00864	Tubulin/FtsZ family, GTPase domain
BJD13_RS12735	SM00865	Tubulin/FtsZ family, C-terminal domain
BJD13_RS12740	SM00842	Cell division protein FtsA
BJD13_RS12860	SM00448	cheY-homologous receiver domain
BJD13_RS12860	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS12865	SM00387	Histidine kinase-like ATPases
BJD13_RS12865	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS12895	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
BJD13_RS12965	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS12985	SM00829	Enoylreductase
BJD13_RS13005	SM00448	cheY-homologous receiver domain
BJD13_RS13005	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS13010	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS13010	SM00387	Histidine kinase-like ATPases
BJD13_RS13010	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS13090	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS13100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJD13_RS13100	SM00866	BJD13_RS13100
BJD13_RS13150	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS13175	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
BJD13_RS13205	SM00387	Histidine kinase-like ATPases
BJD13_RS13205	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS13205	SM00448	cheY-homologous receiver domain
BJD13_RS13210	SM00448	cheY-homologous receiver domain
BJD13_RS13215	SM00387	Histidine kinase-like ATPases
BJD13_RS13215	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS13220	SM00749	bacterial OsmY and nodulation domain
BJD13_RS13230	SM01350	BJD13_RS13230
BJD13_RS13285	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJD13_RS13285	SM00245	tail specific protease
BJD13_RS13290	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS13310	SM00936	Penicillin-binding protein 5, C-terminal domain 
BJD13_RS13330	SM00710	Parallel beta-helix repeats
BJD13_RS13360	SM00268	Actin
BJD13_RS13370	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS13380	SM00829	Enoylreductase
BJD13_RS13395	SM00062	Bacterial periplasmic substrate-binding proteins
BJD13_RS13395	SM00248	ankyrin repeats
BJD13_RS13400	SM00564	beta-propeller repeat
BJD13_RS13420	SM01263	BJD13_RS13420
BJD13_RS13425	SM00267	diguanylate cyclase
BJD13_RS13455	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS13455	SM01086	C-terminal, D2-small domain, of ClpB protein
BJD13_RS13545	SM00448	cheY-homologous receiver domain
BJD13_RS13545	SM00850	LytTr DNA-binding domain
BJD13_RS13575	SM00267	diguanylate cyclase
BJD13_RS13585	SM00637	BJD13_RS13585
BJD13_RS13590	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS13590	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS13590	SM01049	BJD13_RS13590
BJD13_RS13595	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS13595	SM00091	PAS domain
BJD13_RS13595	SM00267	diguanylate cyclase
BJD13_RS13605	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS13615	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BJD13_RS13615	SM01232	BJD13_RS13615
BJD13_RS13665	SM00062	Bacterial periplasmic substrate-binding proteins
BJD13_RS13700	SM00267	diguanylate cyclase
BJD13_RS13855	SM01321	BJD13_RS13855
BJD13_RS13940	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS13940	SM00331	Sigma factor PP2C-like phosphatases
BJD13_RS13960	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJD13_RS13960	SM00895	BJD13_RS13960
BJD13_RS13970	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
BJD13_RS14020	SM00867	YceI-like domain 
BJD13_RS14045	SM00944	Pro-kumamolisin, activation domain
BJD13_RS14105	SM00883	Chaperonin 10 Kd subunit
BJD13_RS14150	SM00878	Biotin carboxylase C-terminal domain
BJD13_RS14180	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS14205	SM00563	Phosphate acyltransferases
BJD13_RS14225	SM00195	Dual specificity phosphatase, catalytic domain
BJD13_RS14240	SM00798	AICARFT/IMPCHase bienzyme
BJD13_RS14240	SM00851	MGS-like domain
BJD13_RS14250	SM01209	BJD13_RS14250
BJD13_RS14250	SM01210	BJD13_RS14250
BJD13_RS14270	SM00563	Phosphate acyltransferases
BJD13_RS14325	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS14325	SM00267	diguanylate cyclase
BJD13_RS14325	SM00448	cheY-homologous receiver domain
BJD13_RS14330	SM00073	Histidine Phosphotransfer domain
BJD13_RS14330	SM00387	Histidine kinase-like ATPases
BJD13_RS14330	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS14330	SM00448	cheY-homologous receiver domain
BJD13_RS14385	SM00100	Cyclic nucleotide-monophosphate binding domain
BJD13_RS14385	SM00419	helix_turn_helix, cAMP Regulatory protein
BJD13_RS14405	SM00903	Flavin reductase like domain
BJD13_RS14430	SM00046	Diacylglycerol kinase catalytic domain (presumed)
BJD13_RS14445	SM00271	DnaJ molecular chaperone homology domain
BJD13_RS14545	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS14565	SM00237	Domains in Na-Ca exchangers and integrin-beta4
BJD13_RS14575	SM00861	Transketolase, pyrimidine binding domain
BJD13_RS14580	SM00326	Src homology 3 domains
BJD13_RS14600	SM00487	DEAD-like helicases superfamily
BJD13_RS14600	SM00490	helicase superfamily c-terminal domain
BJD13_RS14615	SM00822	BJD13_RS14615
BJD13_RS14665	SM00642	Alpha-amylase domain
BJD13_RS14675	SM00642	Alpha-amylase domain
BJD13_RS14685	SM00642	Alpha-amylase domain
BJD13_RS14690	SM00642	Alpha-amylase domain
BJD13_RS14700	SM00267	diguanylate cyclase
BJD13_RS14780	SM01126	BJD13_RS14780
BJD13_RS14800	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS14895	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BJD13_RS14920	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS14920	SM00876	Biotin and Thiamin Synthesis associated domain
BJD13_RS14980	SM01228	BJD13_RS14980
BJD13_RS14995	SM00090	RIO-like kinase
BJD13_RS15000	SM00346	helix_turn_helix isocitrate lyase regulation
BJD13_RS15025	SM00998	Adenylosuccinate lyase C-terminus
BJD13_RS15045	SM00882	Coenzyme A transferase
BJD13_RS15050	SM00882	Coenzyme A transferase
BJD13_RS15065	SM00420	helix_turn_helix, Deoxyribose operon repressor
BJD13_RS15065	SM01134	BJD13_RS15065
BJD13_RS15095	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS15115	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS15120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS15315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS15315	SM00387	Histidine kinase-like ATPases
BJD13_RS15315	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS15320	SM00448	cheY-homologous receiver domain
BJD13_RS15320	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS15355	SM00422	helix_turn_helix, mercury resistance
BJD13_RS15495	SM00487	DEAD-like helicases superfamily
BJD13_RS15495	SM00490	helicase superfamily c-terminal domain
BJD13_RS15495	SM00847	Helicase associated domain (HA2)  Add an annotation
BJD13_RS15520	SM00829	Enoylreductase
BJD13_RS15545	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS15570	SM00833	Cobalamin synthesis protein cobW C-terminal domain
BJD13_RS15615	SM00953	BJD13_RS15615
BJD13_RS15640	SM00878	Biotin carboxylase C-terminal domain
BJD13_RS15665	SM00100	Cyclic nucleotide-monophosphate binding domain
BJD13_RS15665	SM00267	diguanylate cyclase
BJD13_RS15690	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS15725	SM00563	Phosphate acyltransferases
BJD13_RS15830	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS15830	SM00448	cheY-homologous receiver domain
BJD13_RS15835	SM00387	Histidine kinase-like ATPases
BJD13_RS15835	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS15865	SM00450	Rhodanese Homology Domain
BJD13_RS15925	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS15925	SM00448	cheY-homologous receiver domain
BJD13_RS15930	SM00387	Histidine kinase-like ATPases
BJD13_RS15930	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS15940	SM00938	Nitrogen regulatory protein P-II
BJD13_RS15945	SM01230	BJD13_RS15945
BJD13_RS15965	SM00829	Enoylreductase
BJD13_RS15975	SM00028	Tetratricopeptide repeats
BJD13_RS15990	SM00563	Phosphate acyltransferases
BJD13_RS16000	SM00155	Phospholipase D. Active site motifs.
BJD13_RS16005	SM00867	YceI-like domain 
BJD13_RS16010	SM00855	Phosphoglycerate mutase family
BJD13_RS16070	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS16085	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS16110	SM00344	helix_turn_helix ASNC type
BJD13_RS16145	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS16200	SM00642	Alpha-amylase domain
BJD13_RS16205	SM00642	Alpha-amylase domain
BJD13_RS16210	SM00642	Alpha-amylase domain
BJD13_RS16215	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS16250	SM00479	BJD13_RS16250
BJD13_RS16300	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS16320	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS16320	SM00448	cheY-homologous receiver domain
BJD13_RS16350	SM00559	Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
BJD13_RS16600	SM00822	BJD13_RS16600
BJD13_RS16605	SM00822	BJD13_RS16605
BJD13_RS16630	SM00487	DEAD-like helicases superfamily
BJD13_RS16630	SM00490	helicase superfamily c-terminal domain
BJD13_RS16735	SM00829	Enoylreductase
BJD13_RS16780	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJD13_RS16780	SM00245	tail specific protease
BJD13_RS16810	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS16825	SM00155	Phospholipase D. Active site motifs.
BJD13_RS16865	SM00028	Tetratricopeptide repeats
BJD13_RS16880	SM00387	Histidine kinase-like ATPases
BJD13_RS16880	SM00433	TopoisomeraseII
BJD13_RS16890	SM00480	DNA polymerase III beta subunit
BJD13_RS16895	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS16895	SM00760	Bacterial dnaA protein helix-turn-helix domain
BJD13_RS16920	SM00028	Tetratricopeptide repeats
BJD13_RS16930	SM00014	Acid phosphatase homologues
BJD13_RS16990	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS16990	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS16990	SM00091	PAS domain
BJD13_RS16990	SM00267	diguanylate cyclase
BJD13_RS17035	SM00829	Enoylreductase
BJD13_RS17085	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS17115	SM00237	Domains in Na-Ca exchangers and integrin-beta4
BJD13_RS17115	SM00736	Dystroglycan-type cadherin-like domains.
BJD13_RS17115	SM00869	Autotransporter beta-domain
BJD13_RS17140	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS17185	SM00822	BJD13_RS17185
BJD13_RS17300	SM00155	Phospholipase D. Active site motifs.
BJD13_RS17350	SM00347	helix_turn_helix multiple antibiotic resistance protein
BJD13_RS17405	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS17405	SM00091	PAS domain
BJD13_RS17440	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
BJD13_RS17440	SM01232	BJD13_RS17440
BJD13_RS17455	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS17455	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS17495	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
BJD13_RS17515	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS17525	SM00563	Phosphate acyltransferases
BJD13_RS17535	SM00829	Enoylreductase
BJD13_RS17585	SM00633	Glycosyl hydrolase family 10
BJD13_RS17595	SM00633	Glycosyl hydrolase family 10
BJD13_RS17610	SM00633	Glycosyl hydrolase family 10
BJD13_RS17635	SM01007	Class II Aldolase and Adducin N-terminal domain
BJD13_RS17665	SM00612	BJD13_RS17665
BJD13_RS17695	SM00758	BJD13_RS17695
BJD13_RS17695	SM01217	BJD13_RS17695
BJD13_RS17705	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BJD13_RS17720	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS17800	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS17810	SM00836	DALR anticodon binding domain
BJD13_RS17895	SM00564	beta-propeller repeat
BJD13_RS17930	SM00091	PAS domain
BJD13_RS17930	SM00387	Histidine kinase-like ATPases
BJD13_RS17930	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS17930	SM00448	cheY-homologous receiver domain
BJD13_RS17945	SM00346	helix_turn_helix isocitrate lyase regulation
BJD13_RS17960	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BJD13_RS18025	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS18025	SM00448	cheY-homologous receiver domain
BJD13_RS18160	SM00155	Phospholipase D. Active site motifs.
BJD13_RS18185	SM01266	BJD13_RS18185
BJD13_RS18195	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS18240	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS18240	SM01086	C-terminal, D2-small domain, of ClpB protein
BJD13_RS18270	SM00915	Jacalin-like lectin domain
BJD13_RS18305	SM00220	Serine/Threonine protein kinases, catalytic domain
BJD13_RS18315	SM00028	Tetratricopeptide repeats
BJD13_RS18330	SM00240	Forkhead associated domain
BJD13_RS18365	SM00331	Sigma factor PP2C-like phosphatases
BJD13_RS18365	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
BJD13_RS18385	SM00912	haemagglutination activity domain
BJD13_RS18400	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
BJD13_RS18400	SM00474	3'-5' exonuclease
BJD13_RS18400	SM00475	5'-3' exonuclease
BJD13_RS18400	SM00482	DNA polymerase A domain
BJD13_RS18460	SM00563	Phosphate acyltransferases
BJD13_RS18505	SM00822	BJD13_RS18505
BJD13_RS18535	SM00825	Beta-ketoacyl synthase
BJD13_RS18545	SM00248	ankyrin repeats
BJD13_RS18570	SM01057	Eukaryotic-type carbonic anhydrase
BJD13_RS18580	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS18580	SM00924	MgtE intracellular N domain
BJD13_RS18585	SM00881	CoA binding domain
BJD13_RS18650	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS18680	SM00530	Helix-turn-helix XRE-family like proteins 
BJD13_RS18690	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS18710	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
BJD13_RS18755	SM01004	Delta-aminolevulinic acid dehydratase
BJD13_RS18760	SM00477	DNA/RNA non-specific endonuclease
BJD13_RS18760	SM00892	DNA/RNA non-specific endonuclease
BJD13_RS18790	SM00491	BJD13_RS18790
BJD13_RS18800	SM01060	BJD13_RS18800
BJD13_RS18805	SM00248	ankyrin repeats
BJD13_RS18835	SM00448	cheY-homologous receiver domain
BJD13_RS18835	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS18840	SM00387	Histidine kinase-like ATPases
BJD13_RS18840	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS18910	SM00960	Roadblock/LC7 domain
BJD13_RS18940	SM00849	Metallo-beta-lactamase superfamily
BJD13_RS18985	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS19000	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS19000	SM00448	cheY-homologous receiver domain
BJD13_RS19015	SM01060	BJD13_RS19015
BJD13_RS19060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
BJD13_RS19080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS19080	SM00387	Histidine kinase-like ATPases
BJD13_RS19080	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS19085	SM00448	cheY-homologous receiver domain
BJD13_RS19085	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS19130	SM00244	prohibitin homologues
BJD13_RS19160	SM00052	Putative diguanylate phosphodiesterase
BJD13_RS19175	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS19185	SM00938	Nitrogen regulatory protein P-II
BJD13_RS19225	SM00823	Phosphopantetheine attachment site
BJD13_RS19225	SM00824	Thioesterase
BJD13_RS19255	SM00836	DALR anticodon binding domain
BJD13_RS19255	SM01016	Arginyl tRNA synthetase N terminal dom
BJD13_RS19285	SM01259	BJD13_RS19285
BJD13_RS19305	SM00470	ParB-like nuclease domain
BJD13_RS19350	SM00363	S4 RNA-binding domain
BJD13_RS19450	SM00400	zinc finger
BJD13_RS19450	SM00493	BJD13_RS19450
BJD13_RS19450	SM00766	DNA primase DnaG DnaB-binding
BJD13_RS19480	SM00905	Dihydroneopterin aldolase
BJD13_RS19485	SM01217	BJD13_RS19485
BJD13_RS19520	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
BJD13_RS19530	SM00644	BJD13_RS19530
BJD13_RS19580	SM01150	BJD13_RS19580
BJD13_RS19610	SM00257	Lysin motif
BJD13_RS19650	SM00357	Cold shock protein domain
BJD13_RS19650	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS19650	SM00959	Rho termination factor, N-terminal domain
BJD13_RS19660	SM00487	DEAD-like helicases superfamily
BJD13_RS19660	SM00490	helicase superfamily c-terminal domain
BJD13_RS19665	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS19675	SM00448	cheY-homologous receiver domain
BJD13_RS19680	SM00986	Uracil DNA glycosylase superfamily
BJD13_RS19680	SM00987	UreE urease accessory protein, C-terminal domain 
BJD13_RS19715	SM00487	DEAD-like helicases superfamily
BJD13_RS19715	SM00490	helicase superfamily c-terminal domain
BJD13_RS19775	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
BJD13_RS19775	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
BJD13_RS19775	SM00493	BJD13_RS19775
BJD13_RS19800	SM00257	Lysin motif
BJD13_RS19975	SM00646	BJD13_RS19975
BJD13_RS20145	SM00822	BJD13_RS20145
BJD13_RS20225	SM00477	DNA/RNA non-specific endonuclease
BJD13_RS20225	SM00892	DNA/RNA non-specific endonuclease
BJD13_RS20240	SM00631	BJD13_RS20240
BJD13_RS20245	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20320	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20380	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20380	SM00448	cheY-homologous receiver domain
BJD13_RS20390	SM00448	cheY-homologous receiver domain
BJD13_RS20395	SM00091	PAS domain
BJD13_RS20395	SM00138	Methyltransferase, chemotaxis proteins 
BJD13_RS20395	SM00911	HWE histidine kinase
BJD13_RS20440	SM00387	Histidine kinase-like ATPases
BJD13_RS20445	SM00448	cheY-homologous receiver domain
BJD13_RS20445	SM00850	LytTr DNA-binding domain
BJD13_RS20505	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS20510	SM00986	Uracil DNA glycosylase superfamily
BJD13_RS20510	SM00987	UreE urease accessory protein, C-terminal domain 
BJD13_RS20515	SM00554	Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
BJD13_RS20530	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20585	SM00344	helix_turn_helix ASNC type
BJD13_RS20595	SM01005	Alanine racemase, C-terminal domain
BJD13_RS20615	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
BJD13_RS20615	SM00091	PAS domain
BJD13_RS20615	SM00387	Histidine kinase-like ATPases
BJD13_RS20615	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS20615	SM00448	cheY-homologous receiver domain
BJD13_RS20670	SM00387	Histidine kinase-like ATPases
BJD13_RS20670	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS20670	SM00448	cheY-homologous receiver domain
BJD13_RS20690	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20690	SM00930	BJD13_RS20690
BJD13_RS20725	SM00986	Uracil DNA glycosylase superfamily
BJD13_RS20725	SM00987	UreE urease accessory protein, C-terminal domain 
BJD13_RS20795	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20805	SM00830	Chorismate mutase type II
BJD13_RS20820	SM00387	Histidine kinase-like ATPases
BJD13_RS20825	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20825	SM00448	cheY-homologous receiver domain
BJD13_RS20845	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS20915	SM00825	Beta-ketoacyl synthase
BJD13_RS20945	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS20965	SM00487	DEAD-like helicases superfamily
BJD13_RS20965	SM00490	helicase superfamily c-terminal domain
BJD13_RS21005	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS21020	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS21065	SM00893	Electron transfer flavoprotein domain
BJD13_RS21070	SM00893	Electron transfer flavoprotein domain
BJD13_RS21095	SM00984	UDP binding domain
BJD13_RS21110	SM00882	Coenzyme A transferase
BJD13_RS21115	SM00882	Coenzyme A transferase
BJD13_RS21155	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS21170	SM00528	Domain in histone-like proteins of HNS family
BJD13_RS21200	SM00656	BJD13_RS21200
BJD13_RS21275	SM01211	BJD13_RS21275
BJD13_RS21300	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS21365	SM00345	helix_turn_helix gluconate operon transcriptional repressor
BJD13_RS21365	SM00866	BJD13_RS21365
BJD13_RS21440	SM00028	Tetratricopeptide repeats
BJD13_RS21520	SM00450	Rhodanese Homology Domain
BJD13_RS21550	SM01154	BJD13_RS21550
BJD13_RS21560	SM00642	Alpha-amylase domain
BJD13_RS21575	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS21580	SM00822	BJD13_RS21580
BJD13_RS21600	SM00448	cheY-homologous receiver domain
BJD13_RS21600	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS21605	SM00387	Histidine kinase-like ATPases
BJD13_RS21605	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS21615	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS21615	SM00448	cheY-homologous receiver domain
BJD13_RS21650	SM00387	Histidine kinase-like ATPases
BJD13_RS21650	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS21650	SM00448	cheY-homologous receiver domain
BJD13_RS21665	SM00919	Malic enzyme, NAD binding domain
BJD13_RS21665	SM01274	BJD13_RS21665
BJD13_RS21720	SM00267	diguanylate cyclase
BJD13_RS21740	SM01329	BJD13_RS21740
BJD13_RS21745	SM00917	LeuA allosteric (dimerisation) domain
BJD13_RS21775	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS21795	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS21800	SM00342	helix_turn_helix, arabinose operon control protein
BJD13_RS21850	SM00464	Found in ATP-dependent protease La (LON)
BJD13_RS21920	SM00028	Tetratricopeptide repeats
BJD13_RS21920	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS21920	SM00421	helix_turn_helix, Lux Regulon
BJD13_RS22005	SM01011	Aminopeptidase P, N-terminal domain
BJD13_RS22030	SM00729	Elongator protein 3, MiaB family, Radical SAM
BJD13_RS22055	SM00072	Guanylate kinase homologues.
BJD13_RS22060	SM01409	BJD13_RS22060
BJD13_RS22065	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
BJD13_RS22065	SM00954	Region found in RelA / SpoT proteins
BJD13_RS22075	SM00487	DEAD-like helicases superfamily
BJD13_RS22075	SM00490	helicase superfamily c-terminal domain
BJD13_RS22125	SM00965	Secretin and TonB N terminus short domain
BJD13_RS22130	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS22145	SM00327	von Willebrand factor (vWF) type A domain
BJD13_RS22150	SM00028	Tetratricopeptide repeats
BJD13_RS22150	SM00327	von Willebrand factor (vWF) type A domain
BJD13_RS22170	SM00861	Transketolase, pyrimidine binding domain
BJD13_RS22220	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS22260	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
BJD13_RS22300	SM00506	Appr-1"-p processing enzyme
BJD13_RS22340	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
BJD13_RS22340	SM00387	Histidine kinase-like ATPases
BJD13_RS22415	SM00967	RNA 2'-O ribose methyltransferase substrate binding
BJD13_RS22445	SM00354	helix_turn _helix lactose operon repressor
BJD13_RS22500	SM00869	Autotransporter beta-domain
BJD13_RS22510	SM00318	Staphylococcal nuclease homologues
BJD13_RS22520	SM00528	Domain in histone-like proteins of HNS family
BJD13_RS22530	SM00642	Alpha-amylase domain
BJD13_RS22545	SM00448	cheY-homologous receiver domain
BJD13_RS22545	SM00862	Transcriptional regulatory protein, C terminal
BJD13_RS22550	SM00387	Histidine kinase-like ATPases
BJD13_RS22550	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS22610	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS22610	SM00448	cheY-homologous receiver domain
BJD13_RS22615	SM00387	Histidine kinase-like ATPases
BJD13_RS22615	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS22625	SM00881	CoA binding domain
BJD13_RS22675	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS22680	SM00564	beta-propeller repeat
BJD13_RS22750	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS22750	SM01086	C-terminal, D2-small domain, of ClpB protein
BJD13_RS22800	SM00855	Phosphoglycerate mutase family
BJD13_RS22910	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS22955	SM00834	Putative regulatory protein
BJD13_RS22975	SM00458	Ricin-type beta-trefoil
BJD13_RS23005	SM00278	Helix-hairpin-helix DNA-binding motif class 1
BJD13_RS23015	SM00860	SMI1 / KNR4 family
BJD13_RS23020	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS23075	SM00091	PAS domain
BJD13_RS23075	SM00911	HWE histidine kinase
BJD13_RS23080	SM00448	cheY-homologous receiver domain
BJD13_RS23095	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS23095	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
BJD13_RS23110	SM00363	S4 RNA-binding domain
BJD13_RS23125	SM00448	cheY-homologous receiver domain
BJD13_RS23135	SM00341	Helicase and RNase D C-terminal
BJD13_RS23135	SM00487	DEAD-like helicases superfamily
BJD13_RS23135	SM00490	helicase superfamily c-terminal domain
BJD13_RS23135	SM00956	BJD13_RS23135
BJD13_RS23145	SM00382	ATPases associated with a variety of cellular activities
BJD13_RS23145	SM00487	DEAD-like helicases superfamily
BJD13_RS23145	SM00490	helicase superfamily c-terminal domain
BJD13_RS23145	SM00847	Helicase associated domain (HA2)  Add an annotation
BJD13_RS23200	SM00954	Region found in RelA / SpoT proteins
BJD13_RS23230	SM00491	BJD13_RS23230
BJD13_RS23285	SM00448	cheY-homologous receiver domain
BJD13_RS23290	SM00260	Two component signalling adaptor domain
BJD13_RS23295	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
BJD13_RS23300	SM00073	Histidine Phosphotransfer domain
BJD13_RS23300	SM00260	Two component signalling adaptor domain
BJD13_RS23300	SM00387	Histidine kinase-like ATPases
BJD13_RS23300	SM00448	cheY-homologous receiver domain
BJD13_RS23300	SM01231	BJD13_RS23300
BJD13_RS23310	SM00260	Two component signalling adaptor domain
BJD13_RS23340	SM00327	von Willebrand factor (vWF) type A domain
BJD13_RS23355	SM00369	Leucine-rich repeats, typical (most populated) subfamily
BJD13_RS23400	SM01149	BJD13_RS23400
BJD13_RS23405	SM00758	BJD13_RS23405
BJD13_RS23405	SM01217	BJD13_RS23405
BJD13_RS23420	SM00636	BJD13_RS23420
BJD13_RS23425	SM00812	Alpha-L-fucosidase
BJD13_RS23550	SM00116	Domain in cystathionine beta-synthase and other proteins.
BJD13_RS23610	SM00867	YceI-like domain 
BJD13_RS23620	SM00867	YceI-like domain 
BJD13_RS23625	SM00387	Histidine kinase-like ATPases
BJD13_RS23625	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS23625	SM00448	cheY-homologous receiver domain
BJD13_RS23630	SM00387	Histidine kinase-like ATPases
BJD13_RS23630	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS23630	SM00448	cheY-homologous receiver domain
BJD13_RS23635	SM00387	Histidine kinase-like ATPases
BJD13_RS23635	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS23635	SM00448	cheY-homologous receiver domain
BJD13_RS23640	SM00387	Histidine kinase-like ATPases
BJD13_RS23640	SM00388	His Kinase A (phosphoacceptor) domain
BJD13_RS23640	SM00448	cheY-homologous receiver domain
BJD13_RS23685	SM00671	Sel1-like repeats.
