##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM990175v1 #!genome-build-accession NCBI_Assembly:GCF_009901755.1 ##sequence-region NC_062737.1 1 7045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2608322 NC_062737.1 RefSeq region 1 7045 . + . ID=NC_062737.1:1..7045;Dbxref=taxon:2608322;collected-by=Lopez-Vielma%2C C.%2C Quinones-Aguilar%2C E.%2C Rincon-Enriquez%2C E.;country=Mexico;environmental-sample=true;gbkey=Src;genome=genomic;isolation-source=soil;mol_type=genomic DNA;nat-host=Xanthomonas vesicatoria;old-name=Xantomonas phage XaF13 NC_062737.1 RefSeq minus_35_signal 8 27 . + . ID=id-NC_062737.1:8..27;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_35_signal NC_062737.1 RefSeq minus_10_signal 46 57 . + . ID=id-NC_062737.1:46..57;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_10_signal NC_062737.1 RefSeq gene 66 362 . + . ID=gene-M1M15_gp01;Dbxref=GeneID:71930999;Name=M1M15_gp01;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp01;old_locus_tag=XaF13_p01 NC_062737.1 RefSeq CDS 66 362 . + 0 ID=cds-YP_010355830.1;Parent=gene-M1M15_gp01;Dbxref=Genbank:YP_010355830.1,GeneID:71930999;Name=YP_010355830.1;Note=Similar to Xanthomonas citri pv. phaseoli var. fuscans;gbkey=CDS;inference=similar to sequence:RefSeq:WP_127166223.1;locus_tag=M1M15_gp01;product=hypothetical protein;protein_id=YP_010355830.1;transl_table=11 NC_062737.1 RefSeq gene 366 569 . + . ID=gene-M1M15_gp02;Dbxref=GeneID:71930986;Name=M1M15_gp02;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp02;old_locus_tag=XaF13_p02 NC_062737.1 RefSeq CDS 366 569 . + 0 ID=cds-YP_010355831.1;Parent=gene-M1M15_gp02;Dbxref=Genbank:YP_010355831.1,GeneID:71930986;Name=YP_010355831.1;Note=Similar to Xanthomonas oryzae phage Xf109;gbkey=CDS;inference=similar to sequence:UniProt:YP009664516.1;locus_tag=M1M15_gp02;product=tail protein;protein_id=YP_010355831.1;transl_table=11 NC_062737.1 RefSeq gene 576 761 . + . ID=gene-M1M15_gp03;Dbxref=GeneID:71930987;Name=M1M15_gp03;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp03;old_locus_tag=XaF13_p03 NC_062737.1 RefSeq CDS 576 761 . + 0 ID=cds-YP_010355832.1;Parent=gene-M1M15_gp03;Dbxref=Genbank:YP_010355832.1,GeneID:71930987;Name=YP_010355832.1;Note=Similar to Xanthomonas oryzae phage Xf109.;gbkey=CDS;inference=similar to sequence:UniProt:YP009664517.1;locus_tag=M1M15_gp03;product=major coat protein;protein_id=YP_010355832.1;transl_table=11 NC_062737.1 RefSeq minus_35_signal 842 863 . + . ID=id-NC_062737.1:842..863;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_35_signal NC_062737.1 RefSeq minus_10_signal 879 899 . + . ID=id-NC_062737.1:879..899;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_10_signal NC_062737.1 RefSeq gene 907 2412 . + . ID=gene-M1M15_gp04;Dbxref=GeneID:71930988;Name=M1M15_gp04;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp04;old_locus_tag=XaF13_p04 NC_062737.1 RefSeq CDS 907 2412 . + 0 ID=cds-YP_010355833.1;Parent=gene-M1M15_gp04;Dbxref=Genbank:YP_010355833.1,GeneID:71930988;Name=YP_010355833.1;Note=Similar to Xanthomonas oryzae phage Xf109.;gbkey=CDS;inference=similar to sequence:UniProt:YP009664518.1;locus_tag=M1M15_gp04;product=minor coat protein;protein_id=YP_010355833.1;transl_table=11 NC_062737.1 RefSeq gene 2412 2741 . + . ID=gene-M1M15_gp05;Dbxref=GeneID:71930989;Name=M1M15_gp05;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp05;old_locus_tag=XaF13_p05 NC_062737.1 RefSeq CDS 2412 2741 . + 0 ID=cds-YP_010355834.1;Parent=gene-M1M15_gp05;Dbxref=Genbank:YP_010355834.1,GeneID:71930989;Name=YP_010355834.1;Note=Similar to Xanthomonas oryzae phage Xf109.;gbkey=CDS;inference=similar to sequence:UniProt:YP009664519.1;locus_tag=M1M15_gp05;product=minor head protein;protein_id=YP_010355834.1;transl_table=11 NC_062737.1 RefSeq gene 2741 3682 . + . ID=gene-M1M15_gp06;Dbxref=GeneID:71930990;Name=M1M15_gp06;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp06;old_locus_tag=XaF13_p06 NC_062737.1 RefSeq CDS 2741 3682 . + 0 ID=cds-YP_010355835.1;Parent=gene-M1M15_gp06;Dbxref=Genbank:YP_010355835.1,GeneID:71930990;Name=YP_010355835.1;Note=Similar to Xanthomonas oryzae phage Xf409. Zonular occludens toxin (Zot)%3B This family consists of bacterial and viral proteins which are very similar to the Zonular occludens toxin (Zot). Zot is elaborated by bacteriophages present in toxigenic strains of Vibrio cholerae. Zot is a single polypeptide chain of 44.8 kDa%2C with the ability to reversibly alter intestinal epithelial tight junctions%2C allowing the passage of macromolecules through mucosal barriers.;gbkey=CDS;inference=similar to sequence:UniProt:ARK07723.1;locus_tag=M1M15_gp06;product=Zot-like toxin;protein_id=YP_010355835.1;transl_table=11 NC_062737.1 RefSeq gene 3646 4014 . + . ID=gene-M1M15_gp07;Dbxref=GeneID:71930991;Name=M1M15_gp07;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp07;old_locus_tag=XaF13_p07 NC_062737.1 RefSeq CDS 3676 4014 . + 0 ID=cds-YP_010355836.1;Parent=gene-M1M15_gp07;Dbxref=Genbank:YP_010355836.1,GeneID:71930991;Name=YP_010355836.1;Note=Similar to Xanthomonas oryzae phage Xf409.;gbkey=CDS;inference=similar to sequence:UniProt:ARK07723.1;locus_tag=M1M15_gp07;product=hypothetical protein;protein_id=YP_010355836.1;transl_table=11 NC_062737.1 RefSeq gene 4016 4663 . + . ID=gene-M1M15_gp08;Dbxref=GeneID:71930992;Name=M1M15_gp08;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp08;old_locus_tag=XaF13_p08 NC_062737.1 RefSeq CDS 4016 4663 . + 0 ID=cds-YP_010355837.1;Parent=gene-M1M15_gp08;Dbxref=Genbank:YP_010355837.1,GeneID:71930992;Name=YP_010355837.1;Note=Conjugal transfer protein TrbP%3B TraX superfamily.;gbkey=CDS;inference=similar to sequence:UniProt:ARK07722.1;locus_tag=M1M15_gp08;product=transfer protein;protein_id=YP_010355837.1;transl_table=11 NC_062737.1 RefSeq gene 4668 4910 . + . ID=gene-M1M15_gp09;Dbxref=GeneID:71930993;Name=M1M15_gp09;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp09;old_locus_tag=XaF13_p09 NC_062737.1 RefSeq CDS 4668 4910 . + 0 ID=cds-YP_010355838.1;Parent=gene-M1M15_gp09;Dbxref=Genbank:YP_010355838.1,GeneID:71930993;Name=YP_010355838.1;Note=Similar to Xanthomonas phage Cf1c.;gbkey=CDS;inference=similar to sequence:INSD:NP536678.1;locus_tag=M1M15_gp09;product=hypothetical protein;protein_id=YP_010355838.1;transl_table=11 NC_062737.1 RefSeq terminator 4863 4901 . - . ID=id-NC_062737.1:4863..4901;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=terminator NC_062737.1 RefSeq gene 4918 5406 . - . ID=gene-M1M15_gp10;Dbxref=GeneID:71930994;Name=M1M15_gp10;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp10;old_locus_tag=XaF13_p10 NC_062737.1 RefSeq CDS 4918 5406 . - 0 ID=cds-YP_010355839.1;Parent=gene-M1M15_gp10;Dbxref=Genbank:YP_010355839.1,GeneID:71930994;Name=YP_010355839.1;Note=Similar to Xanthomonas citri.;gbkey=CDS;inference=similar to sequence:RefSeq:WP_131705282.1;locus_tag=M1M15_gp10;product=hypothetical protein;protein_id=YP_010355839.1;transl_table=11 NC_062737.1 RefSeq recombination_feature 5022 5036 . - . ID=id-M1M15_gp10;Dbxref=GeneID:71930994;Note=Phage attachment site%3B attP. Similar to Xanthomonas phage Xf109.;gbkey=misc_recomb;inference=similar to sequence:INSD:KX181651.1;locus_tag=M1M15_gp10 NC_062737.1 RefSeq gene 5378 5812 . - . ID=gene-M1M15_gp11;Dbxref=GeneID:71930995;Name=M1M15_gp11;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp11;old_locus_tag=XaF13_p11 NC_062737.1 RefSeq CDS 5378 5812 . - 0 ID=cds-YP_010355840.1;Parent=gene-M1M15_gp11;Dbxref=Genbank:YP_010355840.1,GeneID:71930995;Name=YP_010355840.1;Note=Similar to Xanthomonas citri.;gbkey=CDS;inference=similar to sequence:RefSeq:WP_131705282.1;locus_tag=M1M15_gp11;product=hypothetical protein;protein_id=YP_010355840.1;transl_table=11 NC_062737.1 RefSeq minus_35_signal 5813 5834 . + . ID=id-NC_062737.1:5813..5834;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_35_signal NC_062737.1 RefSeq minus_10_signal 5818 5838 . - . ID=id-NC_062737.1:5818..5838;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_10_signal NC_062737.1 RefSeq minus_10_signal 5852 5872 . + . ID=id-NC_062737.1:5852..5872;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_10_signal NC_062737.1 RefSeq minus_35_signal 5856 5877 . - . ID=id-NC_062737.1:5856..5877;gbkey=regulatory;inference=alignment:phiSITE-PromoterHunter:;regulatory_class=minus_35_signal NC_062737.1 RefSeq gene 5934 6074 . + . ID=gene-M1M15_gp12;Dbxref=GeneID:71930996;Name=M1M15_gp12;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp12;old_locus_tag=XaF13_p12 NC_062737.1 RefSeq CDS 5934 6074 . + 0 ID=cds-YP_010355841.1;Parent=gene-M1M15_gp12;Dbxref=Genbank:YP_010355841.1,GeneID:71930996;Name=YP_010355841.1;Note=Similar to Xanthomonas citri pv. fuscans.;gbkey=CDS;inference=similar to sequence:UniProt:SOO07125.1;locus_tag=M1M15_gp12;product=hypothetical protein;protein_id=YP_010355841.1;transl_table=11 NC_062737.1 RefSeq gene 6064 6783 . + . ID=gene-M1M15_gp13;Dbxref=GeneID:71930997;Name=M1M15_gp13;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp13;old_locus_tag=XaF13_p13 NC_062737.1 RefSeq CDS 6064 6783 . + 0 ID=cds-YP_010355842.1;Parent=gene-M1M15_gp13;Dbxref=Genbank:YP_010355842.1,GeneID:71930997;Name=YP_010355842.1;Note=Similar to Xanthomonas campestris pv. vesicatoria.Bacteriophage replication gene A protein (GPA)%3B This family consists of a group of bacteriophage replication gene A protein (GPA) like sequences from both viruses and bacteria. The members of this family are likely to be endonucleases.;gbkey=CDS;inference=similar to sequence:UniProt:cl15276;locus_tag=M1M15_gp13;product=replication gene A protein;protein_id=YP_010355842.1;transl_table=11 NC_062737.1 RefSeq gene 6761 7039 . + . ID=gene-M1M15_gp14;Dbxref=GeneID:71930998;Name=M1M15_gp14;gbkey=Gene;gene_biotype=protein_coding;locus_tag=M1M15_gp14;old_locus_tag=XaF13_p14 NC_062737.1 RefSeq CDS 6761 7039 . + 0 ID=cds-YP_010355843.1;Parent=gene-M1M15_gp14;Dbxref=Genbank:YP_010355843.1,GeneID:71930998;Name=YP_010355843.1;Note=Similar to Xanthomonas phaseoli pv. phaseoli.DNA polymerase III subunits gamma and tau%3B Provisional.;gbkey=CDS;inference=similar to sequence:UniProt:PRK14954;locus_tag=M1M15_gp14;product=hypothetical protein;protein_id=YP_010355843.1;transl_table=11 ###