FD63_RS00005 SM00382 ATPases associated with a variety of cellular activities FD63_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain FD63_RS00010 SM00480 DNA polymerase III beta subunit FD63_RS00020 SM00387 Histidine kinase-like ATPases FD63_RS00020 SM00433 TopoisomeraseII FD63_RS00035 SM00028 Tetratricopeptide repeats FD63_RS00075 SM00155 Phospholipase D. Active site motifs. FD63_RS00080 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS00085 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FD63_RS00115 SM00382 ATPases associated with a variety of cellular activities FD63_RS00125 SM00829 Enoylreductase FD63_RS00145 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen FD63_RS00160 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS00270 SM00267 diguanylate cyclase FD63_RS00310 SM00354 helix_turn _helix lactose operon repressor FD63_RS00340 SM00344 helix_turn_helix ASNC type FD63_RS00385 SM00014 Acid phosphatase homologues FD63_RS00390 SM00014 Acid phosphatase homologues FD63_RS00420 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. FD63_RS00450 SM00421 helix_turn_helix, Lux Regulon FD63_RS00450 SM00448 cheY-homologous receiver domain FD63_RS00455 SM00387 Histidine kinase-like ATPases FD63_RS00455 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS00510 SM00382 ATPases associated with a variety of cellular activities FD63_RS00670 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS00670 SM00091 PAS domain FD63_RS00780 SM00487 DEAD-like helicases superfamily FD63_RS00780 SM00490 helicase superfamily c-terminal domain FD63_RS00875 SM00855 Phosphoglycerate mutase family FD63_RS00880 SM00867 YceI-like domain FD63_RS00885 SM00155 Phospholipase D. Active site motifs. FD63_RS00895 SM00563 Phosphate acyltransferases FD63_RS00905 SM00028 Tetratricopeptide repeats FD63_RS00920 SM01230 FD63_RS00920 FD63_RS00925 SM00938 Nitrogen regulatory protein P-II FD63_RS00935 SM00387 Histidine kinase-like ATPases FD63_RS00935 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS00940 SM00382 ATPases associated with a variety of cellular activities FD63_RS00940 SM00448 cheY-homologous receiver domain FD63_RS00995 SM00450 Rhodanese Homology Domain FD63_RS01065 SM00028 Tetratricopeptide repeats FD63_RS01065 SM00862 Transcriptional regulatory protein, C terminal FD63_RS01120 SM00563 Phosphate acyltransferases FD63_RS01160 SM00100 Cyclic nucleotide-monophosphate binding domain FD63_RS01160 SM00267 diguanylate cyclase FD63_RS01165 SM00028 Tetratricopeptide repeats FD63_RS01230 SM00829 Enoylreductase FD63_RS01255 SM00487 DEAD-like helicases superfamily FD63_RS01255 SM00490 helicase superfamily c-terminal domain FD63_RS01255 SM00847 Helicase associated domain (HA2) Add an annotation FD63_RS01280 SM00382 ATPases associated with a variety of cellular activities FD63_RS01295 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS01305 SM00382 ATPases associated with a variety of cellular activities FD63_RS01365 SM01004 Delta-aminolevulinic acid dehydratase FD63_RS01380 SM00477 DNA/RNA non-specific endonuclease FD63_RS01380 SM00892 DNA/RNA non-specific endonuclease FD63_RS01405 SM00491 FD63_RS01405 FD63_RS01415 SM01060 FD63_RS01415 FD63_RS01420 SM00248 ankyrin repeats FD63_RS01585 SM00090 RIO-like kinase FD63_RS01605 SM00052 Putative diguanylate phosphodiesterase FD63_RS01610 SM01228 FD63_RS01610 FD63_RS01655 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS01655 SM00876 Biotin and Thiamin Synthesis associated domain FD63_RS01695 SM00382 ATPases associated with a variety of cellular activities FD63_RS01705 SM00938 Nitrogen regulatory protein P-II FD63_RS01725 SM00823 Phosphopantetheine attachment site FD63_RS01725 SM00824 Thioesterase FD63_RS01760 SM00822 FD63_RS01760 FD63_RS01770 SM00836 DALR anticodon binding domain FD63_RS01770 SM01016 Arginyl tRNA synthetase N terminal dom FD63_RS01860 SM00829 Enoylreductase FD63_RS01880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_RS01880 SM00245 tail specific protease FD63_RS01985 SM00400 zinc finger FD63_RS01985 SM00493 FD63_RS01985 FD63_RS01985 SM00766 DNA primase DnaG DnaB-binding FD63_RS02010 SM00905 Dihydroneopterin aldolase FD63_RS02025 SM01217 FD63_RS02025 FD63_RS02065 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_RS02080 SM00644 FD63_RS02080 FD63_RS02130 SM01150 FD63_RS02130 FD63_RS02165 SM00257 Lysin motif FD63_RS02175 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS02190 SM00487 DEAD-like helicases superfamily FD63_RS02190 SM00490 helicase superfamily c-terminal domain FD63_RS02220 SM00357 Cold shock protein domain FD63_RS02220 SM00382 ATPases associated with a variety of cellular activities FD63_RS02220 SM00959 Rho termination factor, N-terminal domain FD63_RS02230 SM00487 DEAD-like helicases superfamily FD63_RS02230 SM00490 helicase superfamily c-terminal domain FD63_RS02235 SM00382 ATPases associated with a variety of cellular activities FD63_RS02245 SM00448 cheY-homologous receiver domain FD63_RS02250 SM00986 Uracil DNA glycosylase superfamily FD63_RS02250 SM00987 UreE urease accessory protein, C-terminal domain FD63_RS02270 SM00487 DEAD-like helicases superfamily FD63_RS02270 SM00490 helicase superfamily c-terminal domain FD63_RS02315 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain FD63_RS02315 SM00437 Bacterial DNA topoisomerase I DNA-binding domain FD63_RS02315 SM00493 FD63_RS02315 FD63_RS02340 SM00257 Lysin motif FD63_RS02450 SM00354 helix_turn _helix lactose operon repressor FD63_RS02460 SM00642 Alpha-amylase domain FD63_RS02465 SM00642 Alpha-amylase domain FD63_RS02470 SM00642 Alpha-amylase domain FD63_RS02560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS02560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS02560 SM01049 FD63_RS02560 FD63_RS02595 SM00267 diguanylate cyclase FD63_RS02595 SM00387 Histidine kinase-like ATPases FD63_RS02595 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS02600 SM00382 ATPases associated with a variety of cellular activities FD63_RS02635 SM00387 Histidine kinase-like ATPases FD63_RS02635 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS02640 SM00382 ATPases associated with a variety of cellular activities FD63_RS02640 SM00448 cheY-homologous receiver domain FD63_RS02665 SM00487 DEAD-like helicases superfamily FD63_RS02680 SM01040 BRO family, N-terminal domain FD63_RS02705 SM00448 cheY-homologous receiver domain FD63_RS02705 SM01012 FD63_RS02705 FD63_RS02730 SM00926 Molybdopterin oxidoreductase Fe4S4 domain FD63_RS02745 SM00642 Alpha-amylase domain FD63_RS02755 SM00642 Alpha-amylase domain FD63_RS02765 SM00642 Alpha-amylase domain FD63_RS02770 SM00642 Alpha-amylase domain FD63_RS02785 SM00448 cheY-homologous receiver domain FD63_RS02790 SM00387 Histidine kinase-like ATPases FD63_RS02790 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS02805 SM00448 cheY-homologous receiver domain FD63_RS02805 SM00850 LytTr DNA-binding domain FD63_RS02890 SM00382 ATPases associated with a variety of cellular activities FD63_RS02890 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_RS02920 SM01263 FD63_RS02920 FD63_RS02950 SM00268 Actin FD63_RS02980 SM00710 Parallel beta-helix repeats FD63_RS02995 SM00936 Penicillin-binding protein 5, C-terminal domain FD63_RS03005 SM01126 FD63_RS03005 FD63_RS03035 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS03040 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_RS03040 SM00245 tail specific protease FD63_RS03070 SM01126 FD63_RS03070 FD63_RS03095 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS03115 SM00072 Guanylate kinase homologues. FD63_RS03120 SM01409 FD63_RS03120 FD63_RS03125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_RS03125 SM00954 Region found in RelA / SpoT proteins FD63_RS03140 SM00487 DEAD-like helicases superfamily FD63_RS03140 SM00490 helicase superfamily c-terminal domain FD63_RS03230 SM00382 ATPases associated with a variety of cellular activities FD63_RS03240 SM00448 cheY-homologous receiver domain FD63_RS03240 SM00862 Transcriptional regulatory protein, C terminal FD63_RS03245 SM00387 Histidine kinase-like ATPases FD63_RS03245 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS03305 SM00650 Ribosomal RNA adenine dimethylases FD63_RS03460 SM00382 ATPases associated with a variety of cellular activities FD63_RS03500 SM00028 Tetratricopeptide repeats FD63_RS03505 SM00937 FD63_RS03505 FD63_RS03515 SM00028 Tetratricopeptide repeats FD63_RS03535 SM01400 FD63_RS03535 FD63_RS03585 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. FD63_RS03585 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FD63_RS03590 SM00649 Ribosomal protein L11/L12 FD63_RS03615 SM00663 RNA polymerase I subunit A N-terminus FD63_RS03630 SM00838 Elongation factor G C-terminus FD63_RS03630 SM00889 Elongation factor G, domain IV FD63_RS03640 SM01403 FD63_RS03640 FD63_RS03660 SM01382 FD63_RS03660 FD63_RS03660 SM01383 FD63_RS03660 FD63_RS03675 SM00322 K homology RNA-binding domain FD63_RS03695 SM01374 FD63_RS03695 FD63_RS03700 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. FD63_RS03760 SM00363 S4 RNA-binding domain FD63_RS03760 SM01390 FD63_RS03760 FD63_RS03765 SM00662 RNA polymerases D FD63_RS03800 SM00838 Elongation factor G C-terminus FD63_RS03880 SM00829 Enoylreductase FD63_RS03920 SM00363 S4 RNA-binding domain FD63_RS03945 SM00382 ATPases associated with a variety of cellular activities FD63_RS03955 SM00829 Enoylreductase FD63_RS03965 SM00855 Phosphoglycerate mutase family FD63_RS04010 SM00014 Acid phosphatase homologues FD63_RS04030 SM00387 Histidine kinase-like ATPases FD63_RS04030 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS04035 SM00448 cheY-homologous receiver domain FD63_RS04035 SM00862 Transcriptional regulatory protein, C terminal FD63_RS04055 SM01329 FD63_RS04055 FD63_RS04100 SM00382 ATPases associated with a variety of cellular activities FD63_RS04100 SM00994 ClpX C4-type zinc finger FD63_RS04100 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_RS04105 SM00382 ATPases associated with a variety of cellular activities FD63_RS04105 SM00464 Found in ATP-dependent protease La (LON) FD63_RS04110 SM00411 bacterial (prokaryotic) histone like domain FD63_RS04140 SM00257 Lysin motif FD63_RS04145 SM00849 Metallo-beta-lactamase superfamily FD63_RS04160 SM00479 FD63_RS04160 FD63_RS04165 SM00331 Sigma factor PP2C-like phosphatases FD63_RS04165 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FD63_RS04200 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS04235 SM00382 ATPases associated with a variety of cellular activities FD63_RS04245 SM00493 FD63_RS04245 FD63_RS04260 SM00460 Transglutaminase/protease-like homologues FD63_RS04270 SM00382 ATPases associated with a variety of cellular activities FD63_RS04310 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FD63_RS04315 SM00822 FD63_RS04315 FD63_RS04325 SM00825 Beta-ketoacyl synthase FD63_RS04370 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FD63_RS04370 SM01232 FD63_RS04370 FD63_RS04375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FD63_RS04400 SM00481 DNA polymerase alpha chain like domain FD63_RS04460 SM01359 FD63_RS04460 FD63_RS04460 SM01360 FD63_RS04460 FD63_RS04500 SM00271 DnaJ molecular chaperone homology domain FD63_RS04505 SM00448 cheY-homologous receiver domain FD63_RS04510 SM00829 Enoylreductase FD63_RS04515 SM00244 prohibitin homologues FD63_RS04520 SM00244 prohibitin homologues FD63_RS04530 SM00788 Adenylosuccinate synthetase FD63_RS04635 SM01068 Putative carbohydrate binding domain FD63_RS04670 SM01060 FD63_RS04670 FD63_RS04695 SM00382 ATPases associated with a variety of cellular activities FD63_RS04730 SM00448 cheY-homologous receiver domain FD63_RS04730 SM00862 Transcriptional regulatory protein, C terminal FD63_RS04735 SM00387 Histidine kinase-like ATPases FD63_RS04735 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS04775 SM00421 helix_turn_helix, Lux Regulon FD63_RS04775 SM00448 cheY-homologous receiver domain FD63_RS04790 SM00478 endonuclease III FD63_RS04815 SM00491 FD63_RS04815 FD63_RS04840 SM00448 cheY-homologous receiver domain FD63_RS04845 SM00448 cheY-homologous receiver domain FD63_RS04850 SM00260 Two component signalling adaptor domain FD63_RS04855 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS04860 SM00073 Histidine Phosphotransfer domain FD63_RS04860 SM00260 Two component signalling adaptor domain FD63_RS04860 SM00387 Histidine kinase-like ATPases FD63_RS04860 SM00448 cheY-homologous receiver domain FD63_RS04860 SM01231 FD63_RS04860 FD63_RS04870 SM00260 Two component signalling adaptor domain FD63_RS04875 SM01126 FD63_RS04875 FD63_RS04905 SM00834 Putative regulatory protein FD63_RS04925 SM00458 Ricin-type beta-trefoil FD63_RS04945 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FD63_RS04955 SM00382 ATPases associated with a variety of cellular activities FD63_RS04990 SM00028 Tetratricopeptide repeats FD63_RS05020 SM00341 Helicase and RNase D C-terminal FD63_RS05020 SM00487 DEAD-like helicases superfamily FD63_RS05020 SM00490 helicase superfamily c-terminal domain FD63_RS05020 SM00956 FD63_RS05020 FD63_RS05030 SM00382 ATPases associated with a variety of cellular activities FD63_RS05030 SM00487 DEAD-like helicases superfamily FD63_RS05030 SM00490 helicase superfamily c-terminal domain FD63_RS05030 SM00847 Helicase associated domain (HA2) Add an annotation FD63_RS05070 SM00954 Region found in RelA / SpoT proteins FD63_RS05110 SM00244 prohibitin homologues FD63_RS05135 SM00054 EF-hand, calcium binding motif FD63_RS05200 SM00904 Riboflavin kinase FD63_RS05260 SM00382 ATPases associated with a variety of cellular activities FD63_RS05290 SM00862 Transcriptional regulatory protein, C terminal FD63_RS05375 SM00382 ATPases associated with a variety of cellular activities FD63_RS05390 SM00342 helix_turn_helix, arabinose operon control protein FD63_RS05445 SM00382 ATPases associated with a variety of cellular activities FD63_RS05490 SM00813 Alpha-L-arabinofuranosidase C-terminus FD63_RS05505 SM00382 ATPases associated with a variety of cellular activities FD63_RS05505 SM00962 SRP54-type protein, GTPase domain FD63_RS05505 SM00963 SRP54-type protein, helical bundle domain FD63_RS05550 SM00363 S4 RNA-binding domain FD63_RS05570 SM00533 DNA-binding domain of DNA mismatch repair MUTS family FD63_RS05570 SM00534 ATPase domain of DNA mismatch repair MUTS family FD63_RS05575 SM00812 Alpha-L-fucosidase FD63_RS05615 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_RS05620 SM00838 Elongation factor G C-terminus FD63_RS05635 SM00358 Double-stranded RNA binding motif FD63_RS05635 SM00535 Ribonuclease III family FD63_RS05650 SM00448 cheY-homologous receiver domain FD63_RS05660 SM01118 FD63_RS05660 FD63_RS05685 SM00357 Cold shock protein domain FD63_RS05700 SM00487 DEAD-like helicases superfamily FD63_RS05700 SM00490 helicase superfamily c-terminal domain FD63_RS05725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS05725 SM00267 diguanylate cyclase FD63_RS05755 SM00869 Autotransporter beta-domain FD63_RS05760 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FD63_RS05765 SM00944 Pro-kumamolisin, activation domain FD63_RS05835 SM01038 Beta galactosidase small chain FD63_RS05840 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS05840 SM00895 FD63_RS05840 FD63_RS05845 SM00564 beta-propeller repeat FD63_RS05850 SM00387 Histidine kinase-like ATPases FD63_RS05850 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS05870 SM00363 S4 RNA-binding domain FD63_RS05900 SM00052 Putative diguanylate phosphodiesterase FD63_RS06165 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS06230 SM00382 ATPases associated with a variety of cellular activities FD63_RS06230 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_RS06260 SM00240 Forkhead associated domain FD63_RS06285 SM00331 Sigma factor PP2C-like phosphatases FD63_RS06285 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain FD63_RS06310 SM00387 Histidine kinase-like ATPases FD63_RS06310 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS06320 SM00448 cheY-homologous receiver domain FD63_RS06320 SM00862 Transcriptional regulatory protein, C terminal FD63_RS06335 SM00977 TilS substrate C-terminal domain FD63_RS06345 SM00098 Alkaline phosphatase homologues FD63_RS06425 SM01160 FD63_RS06425 FD63_RS06465 SM00028 Tetratricopeptide repeats FD63_RS06550 SM00257 Lysin motif FD63_RS06580 SM00859 Semialdehyde dehydrogenase, NAD binding domain FD63_RS06650 SM00822 FD63_RS06650 FD63_RS06695 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FD63_RS06700 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FD63_RS06750 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS06750 SM00322 K homology RNA-binding domain FD63_RS06770 SM01387 FD63_RS06770 FD63_RS06775 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS06775 SM00322 K homology RNA-binding domain FD63_RS06780 SM00052 Putative diguanylate phosphodiesterase FD63_RS06780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS06800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS06800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS06805 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS06810 SM00260 Two component signalling adaptor domain FD63_RS06820 SM00528 Domain in histone-like proteins of HNS family FD63_RS06825 SM00474 3'-5' exonuclease FD63_RS06850 SM00478 endonuclease III FD63_RS06855 SM00382 ATPases associated with a variety of cellular activities FD63_RS06855 SM00962 SRP54-type protein, GTPase domain FD63_RS06855 SM00963 SRP54-type protein, helical bundle domain FD63_RS06860 SM00342 helix_turn_helix, arabinose operon control protein FD63_RS06885 SM01130 FD63_RS06885 FD63_RS06975 SM00387 Histidine kinase-like ATPases FD63_RS07005 SM00849 Metallo-beta-lactamase superfamily FD63_RS07030 SM00344 helix_turn_helix ASNC type FD63_RS07045 SM01323 FD63_RS07045 FD63_RS07075 SM00052 Putative diguanylate phosphodiesterase FD63_RS07075 SM00267 diguanylate cyclase FD63_RS07075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS07085 SM00841 Elongation factor P, C-terminal FD63_RS07085 SM01185 FD63_RS07085 FD63_RS07170 SM00564 beta-propeller repeat FD63_RS07215 SM00840 FD63_RS07215 FD63_RS07250 SM00859 Semialdehyde dehydrogenase, NAD binding domain FD63_RS07270 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase FD63_RS07310 SM00646 FD63_RS07310 FD63_RS07385 SM00052 Putative diguanylate phosphodiesterase FD63_RS07385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS07385 SM00267 diguanylate cyclase FD63_RS07390 SM00448 cheY-homologous receiver domain FD63_RS07395 SM00387 Histidine kinase-like ATPases FD63_RS07405 SM00014 Acid phosphatase homologues FD63_RS07490 SM00100 Cyclic nucleotide-monophosphate binding domain FD63_RS07490 SM00419 helix_turn_helix, cAMP Regulatory protein FD63_RS07570 SM01007 Class II Aldolase and Adducin N-terminal domain FD63_RS07620 SM00841 Elongation factor P, C-terminal FD63_RS07620 SM01185 FD63_RS07620 FD63_RS07640 SM00899 FD63_RS07640 FD63_RS07660 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FD63_RS07685 SM00873 B3/4 domain FD63_RS07685 SM00874 tRNA synthetase B5 domain FD63_RS07685 SM00896 Ferredoxin-fold anticodon binding domain FD63_RS07690 SM00411 bacterial (prokaryotic) histone like domain FD63_RS07695 SM00422 helix_turn_helix, mercury resistance FD63_RS07765 SM00861 Transketolase, pyrimidine binding domain FD63_RS07770 SM00507 HNH nucleases FD63_RS07835 SM00646 FD63_RS07835 FD63_RS07840 SM00853 MutL C terminal dimerisation domain FD63_RS07840 SM01340 FD63_RS07840 FD63_RS07860 SM00822 FD63_RS07860 FD63_RS07875 SM00052 Putative diguanylate phosphodiesterase FD63_RS07875 SM00091 PAS domain FD63_RS07875 SM00267 diguanylate cyclase FD63_RS07885 SM01322 FD63_RS07885 FD63_RS07895 SM00357 Cold shock protein domain FD63_RS07935 SM00487 DEAD-like helicases superfamily FD63_RS07935 SM00490 helicase superfamily c-terminal domain FD63_RS07940 SM00382 ATPases associated with a variety of cellular activities FD63_RS07965 SM01217 FD63_RS07965 FD63_RS07970 SM00631 FD63_RS07970 FD63_RS08005 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_RS08030 SM00382 ATPases associated with a variety of cellular activities FD63_RS08075 SM00357 Cold shock protein domain FD63_RS08120 SM00382 ATPases associated with a variety of cellular activities FD63_RS08165 SM00822 FD63_RS08165 FD63_RS08230 SM00271 DnaJ molecular chaperone homology domain FD63_RS08250 SM00382 ATPases associated with a variety of cellular activities FD63_RS08265 SM00052 Putative diguanylate phosphodiesterase FD63_RS08265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS08265 SM00267 diguanylate cyclase FD63_RS08285 SM00861 Transketolase, pyrimidine binding domain FD63_RS08295 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. FD63_RS08345 SM00382 ATPases associated with a variety of cellular activities FD63_RS08350 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS08370 SM00984 UDP binding domain FD63_RS08395 SM01018 B12 binding domain FD63_RS08405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FD63_RS08500 SM00487 DEAD-like helicases superfamily FD63_RS08500 SM00490 helicase superfamily c-terminal domain FD63_RS08570 SM00382 ATPases associated with a variety of cellular activities FD63_RS08575 SM00382 ATPases associated with a variety of cellular activities FD63_RS08625 SM00382 ATPases associated with a variety of cellular activities FD63_RS08655 SM00363 S4 RNA-binding domain FD63_RS08680 SM00354 helix_turn _helix lactose operon repressor FD63_RS08740 SM00382 ATPases associated with a variety of cellular activities FD63_RS08785 SM00382 ATPases associated with a variety of cellular activities FD63_RS08795 SM00849 Metallo-beta-lactamase superfamily FD63_RS08810 SM00382 ATPases associated with a variety of cellular activities FD63_RS08825 SM00226 Low molecular weight phosphatase family FD63_RS08835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FD63_RS08835 SM00465 GIY-YIG type nucleases (URI domain) FD63_RS08885 SM00825 Beta-ketoacyl synthase FD63_RS08940 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS08950 SM00382 ATPases associated with a variety of cellular activities FD63_RS08965 SM00421 helix_turn_helix, Lux Regulon FD63_RS08965 SM00448 cheY-homologous receiver domain FD63_RS08975 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS08980 SM00363 S4 RNA-binding domain FD63_RS09070 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS09075 SM00411 bacterial (prokaryotic) histone like domain FD63_RS09120 SM00562 FD63_RS09120 FD63_RS09130 SM00028 Tetratricopeptide repeats FD63_RS09145 SM00564 beta-propeller repeat FD63_RS09150 SM00382 ATPases associated with a variety of cellular activities FD63_RS09160 SM00852 Probable molybdopterin binding domain FD63_RS09165 SM00450 Rhodanese Homology Domain FD63_RS09190 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_RS09190 SM01240 FD63_RS09190 FD63_RS09200 SM00758 FD63_RS09200 FD63_RS09205 SM00382 ATPases associated with a variety of cellular activities FD63_RS09210 SM00387 Histidine kinase-like ATPases FD63_RS09210 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS09210 SM00448 cheY-homologous receiver domain FD63_RS09220 SM00529 Helix-turn-helix diphteria tox regulatory element FD63_RS09230 SM00479 FD63_RS09230 FD63_RS09305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS09305 SM00091 PAS domain FD63_RS09305 SM00387 Histidine kinase-like ATPases FD63_RS09305 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS09305 SM00448 cheY-homologous receiver domain FD63_RS09310 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS09310 SM00732 Likely ribonuclease with RNase H fold. FD63_RS09315 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS09315 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS09315 SM00091 PAS domain FD63_RS09315 SM00387 Histidine kinase-like ATPases FD63_RS09315 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS09315 SM00448 cheY-homologous receiver domain FD63_RS09320 SM00448 cheY-homologous receiver domain FD63_RS09410 SM00342 helix_turn_helix, arabinose operon control protein FD63_RS09415 SM00823 Phosphopantetheine attachment site FD63_RS09430 SM00823 Phosphopantetheine attachment site FD63_RS09435 SM00823 Phosphopantetheine attachment site FD63_RS09440 SM00823 Phosphopantetheine attachment site FD63_RS09440 SM00824 Thioesterase FD63_RS09470 SM00382 ATPases associated with a variety of cellular activities FD63_RS09475 SM00923 MbtH-like protein FD63_RS09495 SM00155 Phospholipase D. Active site motifs. FD63_RS09560 SM00851 MGS-like domain FD63_RS09560 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FD63_RS09570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain FD63_RS09760 SM00382 ATPases associated with a variety of cellular activities FD63_RS09780 SM00382 ATPases associated with a variety of cellular activities FD63_RS09780 SM00843 FD63_RS09780 FD63_RS09800 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS09805 SM00382 ATPases associated with a variety of cellular activities FD63_RS09805 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_RS09835 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS09845 SM00382 ATPases associated with a variety of cellular activities FD63_RS09855 SM00052 Putative diguanylate phosphodiesterase FD63_RS09855 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS09855 SM00091 PAS domain FD63_RS09855 SM00267 diguanylate cyclase FD63_RS09860 SM00091 PAS domain FD63_RS09860 SM00387 Histidine kinase-like ATPases FD63_RS09865 SM00052 Putative diguanylate phosphodiesterase FD63_RS09865 SM00267 diguanylate cyclase FD63_RS09865 SM00448 cheY-homologous receiver domain FD63_RS09870 SM00387 Histidine kinase-like ATPases FD63_RS09885 SM00858 FD63_RS09885 FD63_RS09890 SM00260 Two component signalling adaptor domain FD63_RS09890 SM00448 cheY-homologous receiver domain FD63_RS09935 SM00047 Lysozyme subfamily 2 FD63_RS09975 SM00421 helix_turn_helix, Lux Regulon FD63_RS09975 SM00448 cheY-homologous receiver domain FD63_RS09985 SM00448 cheY-homologous receiver domain FD63_RS09990 SM00382 ATPases associated with a variety of cellular activities FD63_RS10010 SM00822 FD63_RS10010 FD63_RS10015 SM00822 FD63_RS10015 FD63_RS10035 SM01126 FD63_RS10035 FD63_RS10065 SM00382 ATPases associated with a variety of cellular activities FD63_RS10115 SM00267 diguanylate cyclase FD63_RS10120 SM00267 diguanylate cyclase FD63_RS10135 SM00382 ATPases associated with a variety of cellular activities FD63_RS10135 SM00962 SRP54-type protein, GTPase domain FD63_RS10150 SM00448 cheY-homologous receiver domain FD63_RS10160 SM00073 Histidine Phosphotransfer domain FD63_RS10160 SM00260 Two component signalling adaptor domain FD63_RS10160 SM00387 Histidine kinase-like ATPases FD63_RS10160 SM01231 FD63_RS10160 FD63_RS10180 SM00260 Two component signalling adaptor domain FD63_RS10190 SM00448 cheY-homologous receiver domain FD63_RS10195 SM00073 Histidine Phosphotransfer domain FD63_RS10195 SM00260 Two component signalling adaptor domain FD63_RS10195 SM00387 Histidine kinase-like ATPases FD63_RS10195 SM01231 FD63_RS10195 FD63_RS10205 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10205 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10210 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10215 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10265 SM00260 Two component signalling adaptor domain FD63_RS10275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS10285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS10290 SM00138 Methyltransferase, chemotaxis proteins FD63_RS10300 SM00448 cheY-homologous receiver domain FD63_RS10305 SM00052 Putative diguanylate phosphodiesterase FD63_RS10305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS10305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS10305 SM00091 PAS domain FD63_RS10305 SM00267 diguanylate cyclase FD63_RS10325 SM00966 SpoVT / AbrB like domain FD63_RS10345 SM00073 Histidine Phosphotransfer domain FD63_RS10345 SM00387 Histidine kinase-like ATPases FD63_RS10345 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS10345 SM00448 cheY-homologous receiver domain FD63_RS10350 SM00448 cheY-homologous receiver domain FD63_RS10350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_RS10360 SM00937 FD63_RS10360 FD63_RS10365 SM00850 LytTr DNA-binding domain FD63_RS10385 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_RS10410 SM01130 FD63_RS10410 FD63_RS10425 SM00670 Large family of predicted nucleotide-binding domains FD63_RS10480 SM00642 Alpha-amylase domain FD63_RS10500 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain FD63_RS10510 SM00382 ATPases associated with a variety of cellular activities FD63_RS10550 SM00382 ATPases associated with a variety of cellular activities FD63_RS10560 SM01103 FD63_RS10560 FD63_RS10570 SM00257 Lysin motif FD63_RS10590 SM00463 Small MutS-related domain FD63_RS10615 SM01192 FD63_RS10615 FD63_RS10615 SM01193 FD63_RS10615 FD63_RS10640 SM00387 Histidine kinase-like ATPases FD63_RS10640 SM00433 TopoisomeraseII FD63_RS10660 SM01091 Transporter associated domain FD63_RS10680 SM00450 Rhodanese Homology Domain FD63_RS10700 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS10700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS10700 SM00091 PAS domain FD63_RS10700 SM00267 diguanylate cyclase FD63_RS10710 SM00984 UDP binding domain FD63_RS10720 SM00354 helix_turn _helix lactose operon repressor FD63_RS10745 SM00448 cheY-homologous receiver domain FD63_RS10745 SM00862 Transcriptional regulatory protein, C terminal FD63_RS10750 SM00387 Histidine kinase-like ATPases FD63_RS10750 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS10755 SM01321 FD63_RS10755 FD63_RS10770 SM00382 ATPases associated with a variety of cellular activities FD63_RS10865 SM00830 Chorismate mutase type II FD63_RS10885 SM00240 Forkhead associated domain FD63_RS10915 SM00822 FD63_RS10915 FD63_RS10920 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS10920 SM00866 FD63_RS10920 FD63_RS10975 SM00434 DNA Topoisomerase IV FD63_RS10995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 FD63_RS10995 SM00292 breast cancer carboxy-terminal domain FD63_RS10995 SM00532 Ligase N family FD63_RS11005 SM00771 ZipA, C-terminal domain (FtsZ-binding) FD63_RS11010 SM00968 SMC proteins Flexible Hinge Domain FD63_RS11060 SM00421 helix_turn_helix, Lux Regulon FD63_RS11060 SM00448 cheY-homologous receiver domain FD63_RS11105 SM00947 Carbonic anhydrase FD63_RS11130 SM00479 FD63_RS11130 FD63_RS11260 SM01001 AIR carboxylase FD63_RS11320 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS11340 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_RS11340 SM01091 Transporter associated domain FD63_RS11375 SM00382 ATPases associated with a variety of cellular activities FD63_RS11410 SM01230 FD63_RS11410 FD63_RS11420 SM01230 FD63_RS11420 FD63_RS11430 SM00267 diguanylate cyclase FD63_RS11430 SM00448 cheY-homologous receiver domain FD63_RS11485 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS11495 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FD63_RS11495 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FD63_RS11520 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS11520 SM00091 PAS domain FD63_RS11520 SM00387 Histidine kinase-like ATPases FD63_RS11520 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS11520 SM00448 cheY-homologous receiver domain FD63_RS11520 SM01079 FD63_RS11520 FD63_RS11525 SM00448 cheY-homologous receiver domain FD63_RS11525 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_RS11530 SM00981 FD63_RS11530 FD63_RS11555 SM00644 FD63_RS11555 FD63_RS11565 SM00450 Rhodanese Homology Domain FD63_RS11590 SM00478 endonuclease III FD63_RS11590 SM00525 FD63_RS11590 FD63_RS11600 SM00947 Carbonic anhydrase FD63_RS11635 SM00382 ATPases associated with a variety of cellular activities FD63_RS11660 SM00479 FD63_RS11660 FD63_RS11680 SM00967 RNA 2'-O ribose methyltransferase substrate binding FD63_RS11690 SM00316 Ribosomal protein S1-like RNA-binding domain FD63_RS11690 SM00357 Cold shock protein domain FD63_RS11690 SM00955 FD63_RS11690 FD63_RS11715 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS11740 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_RS11750 SM00434 DNA Topoisomerase IV FD63_RS11765 SM00710 Parallel beta-helix repeats FD63_RS11765 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses FD63_RS11770 SM01172 FD63_RS11770 FD63_RS11795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. FD63_RS11805 SM00972 Spore Coat Protein U domain FD63_RS11820 SM00972 Spore Coat Protein U domain FD63_RS11845 SM00267 diguanylate cyclase FD63_RS11875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_RS11910 SM00481 DNA polymerase alpha chain like domain FD63_RS12005 SM00382 ATPases associated with a variety of cellular activities FD63_RS12045 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS12045 SM00267 diguanylate cyclase FD63_RS12050 SM00363 S4 RNA-binding domain FD63_RS12055 SM00487 DEAD-like helicases superfamily FD63_RS12055 SM00490 helicase superfamily c-terminal domain FD63_RS12100 SM00342 helix_turn_helix, arabinose operon control protein FD63_RS12100 SM00478 endonuclease III FD63_RS12100 SM01009 AlkA N-terminal domain FD63_RS12120 SM00829 Enoylreductase FD63_RS12155 SM01092 CO dehydrogenase flavoprotein C-terminal domain FD63_RS12160 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FD63_RS12230 SM00645 Papain family cysteine protease FD63_RS12235 SM00387 Histidine kinase-like ATPases FD63_RS12240 SM00448 cheY-homologous receiver domain FD63_RS12265 SM00487 DEAD-like helicases superfamily FD63_RS12265 SM00490 helicase superfamily c-terminal domain FD63_RS12265 SM00982 FD63_RS12265 FD63_RS12265 SM01058 CarD-like/TRCF domain FD63_RS12275 SM00073 Histidine Phosphotransfer domain FD63_RS12275 SM00260 Two component signalling adaptor domain FD63_RS12275 SM00387 Histidine kinase-like ATPases FD63_RS12275 SM01231 FD63_RS12275 FD63_RS12280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS12280 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS12285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS12285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS12290 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS12290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS12295 SM00260 Two component signalling adaptor domain FD63_RS12300 SM00052 Putative diguanylate phosphodiesterase FD63_RS12300 SM00448 cheY-homologous receiver domain FD63_RS12305 SM00138 Methyltransferase, chemotaxis proteins FD63_RS12310 SM00448 cheY-homologous receiver domain FD63_RS12325 SM00342 helix_turn_helix, arabinose operon control protein FD63_RS12345 SM00855 Phosphoglycerate mutase family FD63_RS12385 SM00248 ankyrin repeats FD63_RS12420 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS12480 SM00411 bacterial (prokaryotic) histone like domain FD63_RS12510 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain FD63_RS12525 SM00382 ATPases associated with a variety of cellular activities FD63_RS12555 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. FD63_RS12590 SM00448 cheY-homologous receiver domain FD63_RS12590 SM00862 Transcriptional regulatory protein, C terminal FD63_RS12690 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_RS12710 SM00382 ATPases associated with a variety of cellular activities FD63_RS12755 SM00924 MgtE intracellular N domain FD63_RS12790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS12790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS12795 SM00656 FD63_RS12795 FD63_RS12815 SM00732 Likely ribonuclease with RNase H fold. FD63_RS12840 SM00382 ATPases associated with a variety of cellular activities FD63_RS12865 SM00422 helix_turn_helix, mercury resistance FD63_RS12930 SM00387 Histidine kinase-like ATPases FD63_RS12930 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS12930 SM00448 cheY-homologous receiver domain FD63_RS12935 SM00387 Histidine kinase-like ATPases FD63_RS12935 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS12935 SM00448 cheY-homologous receiver domain FD63_RS12940 SM00867 YceI-like domain FD63_RS12950 SM00867 YceI-like domain FD63_RS12965 SM00267 diguanylate cyclase FD63_RS13010 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_RS13095 SM00822 FD63_RS13095 FD63_RS13170 SM00244 prohibitin homologues FD63_RS13220 SM00812 Alpha-L-fucosidase FD63_RS13225 SM00636 FD63_RS13225 FD63_RS13240 SM00758 FD63_RS13240 FD63_RS13240 SM01217 FD63_RS13240 FD63_RS13255 SM01149 FD63_RS13255 FD63_RS13345 SM00382 ATPases associated with a variety of cellular activities FD63_RS13345 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_RS13600 SM01126 FD63_RS13600 FD63_RS13605 SM00852 Probable molybdopterin binding domain FD63_RS13610 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS13710 SM01002 Alanine dehydrogenase/PNT, C-terminal domain FD63_RS13710 SM01003 Alanine dehydrogenase/PNT, N-terminal domain FD63_RS13730 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FD63_RS13730 SM00475 5'-3' exonuclease FD63_RS13745 SM00460 Transglutaminase/protease-like homologues FD63_RS13875 SM00382 ATPases associated with a variety of cellular activities FD63_RS13875 SM01086 C-terminal, D2-small domain, of ClpB protein FD63_RS13935 SM00564 beta-propeller repeat FD63_RS13965 SM00382 ATPases associated with a variety of cellular activities FD63_RS14010 SM00881 CoA binding domain FD63_RS14020 SM00387 Histidine kinase-like ATPases FD63_RS14020 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS14025 SM00382 ATPases associated with a variety of cellular activities FD63_RS14025 SM00448 cheY-homologous receiver domain FD63_RS14065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS14065 SM00387 Histidine kinase-like ATPases FD63_RS14065 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS14070 SM00448 cheY-homologous receiver domain FD63_RS14070 SM00862 Transcriptional regulatory protein, C terminal FD63_RS14130 SM00869 Autotransporter beta-domain FD63_RS14180 SM00354 helix_turn _helix lactose operon repressor FD63_RS14195 SM00967 RNA 2'-O ribose methyltransferase substrate binding FD63_RS14210 SM00645 Papain family cysteine protease FD63_RS14225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS14225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS14285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. FD63_RS14285 SM00387 Histidine kinase-like ATPases FD63_RS14355 SM00506 Appr-1"-p processing enzyme FD63_RS14410 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD63_RS14430 SM00450 Rhodanese Homology Domain FD63_RS14435 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor FD63_RS14440 SM00849 Metallo-beta-lactamase superfamily FD63_RS14455 SM00382 ATPases associated with a variety of cellular activities FD63_RS14460 SM00903 Flavin reductase like domain FD63_RS14510 SM00861 Transketolase, pyrimidine binding domain FD63_RS14525 SM00028 Tetratricopeptide repeats FD63_RS14525 SM00327 von Willebrand factor (vWF) type A domain FD63_RS14530 SM00327 von Willebrand factor (vWF) type A domain FD63_RS14545 SM00382 ATPases associated with a variety of cellular activities FD63_RS14550 SM00965 Secretin and TonB N terminus short domain FD63_RS14570 SM00842 Cell division protein FtsA FD63_RS14595 SM01011 Aminopeptidase P, N-terminal domain FD63_RS14605 SM00052 Putative diguanylate phosphodiesterase FD63_RS14605 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS14605 SM00091 PAS domain FD63_RS14605 SM00267 diguanylate cyclase FD63_RS14670 SM00421 helix_turn_helix, Lux Regulon FD63_RS14725 SM00464 Found in ATP-dependent protease La (LON) FD63_RS14785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS14810 SM00917 LeuA allosteric (dimerisation) domain FD63_RS14830 SM01329 FD63_RS14830 FD63_RS14835 SM00267 diguanylate cyclase FD63_RS14880 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS14885 SM00382 ATPases associated with a variety of cellular activities FD63_RS14900 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS14905 SM00919 Malic enzyme, NAD binding domain FD63_RS14905 SM01274 FD63_RS14905 FD63_RS14920 SM00387 Histidine kinase-like ATPases FD63_RS14920 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS14920 SM00448 cheY-homologous receiver domain FD63_RS14930 SM00421 helix_turn_helix, Lux Regulon FD63_RS14930 SM00448 cheY-homologous receiver domain FD63_RS14940 SM00387 Histidine kinase-like ATPases FD63_RS14940 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS14945 SM00448 cheY-homologous receiver domain FD63_RS14945 SM00862 Transcriptional regulatory protein, C terminal FD63_RS14960 SM00822 FD63_RS14960 FD63_RS14965 SM00354 helix_turn _helix lactose operon repressor FD63_RS14980 SM00642 Alpha-amylase domain FD63_RS14990 SM01154 FD63_RS14990 FD63_RS15025 SM00450 Rhodanese Homology Domain FD63_RS15080 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS15095 SM00829 Enoylreductase FD63_RS15105 SM00448 cheY-homologous receiver domain FD63_RS15105 SM00862 Transcriptional regulatory protein, C terminal FD63_RS15110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS15110 SM00387 Histidine kinase-like ATPases FD63_RS15110 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS15200 SM00354 helix_turn _helix lactose operon repressor FD63_RS15210 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS15210 SM00866 FD63_RS15210 FD63_RS15265 SM00387 Histidine kinase-like ATPases FD63_RS15265 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS15265 SM00448 cheY-homologous receiver domain FD63_RS15270 SM00448 cheY-homologous receiver domain FD63_RS15275 SM00387 Histidine kinase-like ATPases FD63_RS15275 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS15285 SM00749 bacterial OsmY and nodulation domain FD63_RS15295 SM01350 FD63_RS15295 FD63_RS15320 SM00563 Phosphate acyltransferases FD63_RS15360 SM00996 S-adenosyl-L-homocysteine hydrolase FD63_RS15360 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FD63_RS15410 SM00957 SecA DEAD-like domain FD63_RS15410 SM00958 SecA preprotein cross-linking domain FD63_RS15430 SM00864 Tubulin/FtsZ family, GTPase domain FD63_RS15430 SM00865 Tubulin/FtsZ family, C-terminal domain FD63_RS15435 SM00842 Cell division protein FtsA FD63_RS15535 SM00448 cheY-homologous receiver domain FD63_RS15535 SM00862 Transcriptional regulatory protein, C terminal FD63_RS15540 SM00387 Histidine kinase-like ATPases FD63_RS15540 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS15575 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain FD63_RS15640 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS15650 SM00382 ATPases associated with a variety of cellular activities FD63_RS15740 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS15740 SM00866 FD63_RS15740 FD63_RS15800 SM00382 ATPases associated with a variety of cellular activities FD63_RS15820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). FD63_RS15820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS15825 SM01211 FD63_RS15825 FD63_RS15915 SM00528 Domain in histone-like proteins of HNS family FD63_RS15930 SM00382 ATPases associated with a variety of cellular activities FD63_RS15960 SM00882 Coenzyme A transferase FD63_RS15965 SM00882 Coenzyme A transferase FD63_RS16000 SM00893 Electron transfer flavoprotein domain FD63_RS16005 SM00893 Electron transfer flavoprotein domain FD63_RS16100 SM00382 ATPases associated with a variety of cellular activities FD63_RS16115 SM00116 Domain in cystathionine beta-synthase and other proteins. FD63_RS16150 SM00487 DEAD-like helicases superfamily FD63_RS16150 SM00490 helicase superfamily c-terminal domain FD63_RS16200 SM00825 Beta-ketoacyl synthase FD63_RS16230 SM00422 helix_turn_helix, mercury resistance FD63_RS16265 SM00382 ATPases associated with a variety of cellular activities FD63_RS16295 SM00382 ATPases associated with a variety of cellular activities FD63_RS16295 SM00448 cheY-homologous receiver domain FD63_RS16300 SM00387 Histidine kinase-like ATPases FD63_RS16320 SM00830 Chorismate mutase type II FD63_RS16330 SM00382 ATPases associated with a variety of cellular activities FD63_RS16390 SM00986 Uracil DNA glycosylase superfamily FD63_RS16390 SM00987 UreE urease accessory protein, C-terminal domain FD63_RS16415 SM00382 ATPases associated with a variety of cellular activities FD63_RS16415 SM00930 FD63_RS16415 FD63_RS16460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) FD63_RS16460 SM00091 PAS domain FD63_RS16460 SM00387 Histidine kinase-like ATPases FD63_RS16460 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS16460 SM00448 cheY-homologous receiver domain FD63_RS16475 SM01005 Alanine racemase, C-terminal domain FD63_RS16485 SM00344 helix_turn_helix ASNC type FD63_RS16530 SM00060 Fibronectin type 3 domain FD63_RS16530 SM00944 Pro-kumamolisin, activation domain FD63_RS16550 SM00382 ATPases associated with a variety of cellular activities FD63_RS16565 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. FD63_RS16570 SM00986 Uracil DNA glycosylase superfamily FD63_RS16570 SM00987 UreE urease accessory protein, C-terminal domain FD63_RS16575 SM00729 Elongator protein 3, MiaB family, Radical SAM FD63_RS16620 SM00822 FD63_RS16620 FD63_RS16625 SM00849 Metallo-beta-lactamase superfamily FD63_RS16640 SM00267 diguanylate cyclase FD63_RS16650 SM00052 Putative diguanylate phosphodiesterase FD63_RS16650 SM00091 PAS domain FD63_RS16650 SM00267 diguanylate cyclase FD63_RS16720 SM00448 cheY-homologous receiver domain FD63_RS16720 SM00850 LytTr DNA-binding domain FD63_RS16760 SM00637 FD63_RS16760 FD63_RS16795 SM00342 helix_turn_helix, arabinose operon control protein FD63_RS16915 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain FD63_RS16915 SM00331 Sigma factor PP2C-like phosphatases FD63_RS16930 SM00867 YceI-like domain FD63_RS16945 SM00944 Pro-kumamolisin, activation domain FD63_RS17010 SM00487 DEAD-like helicases superfamily FD63_RS17010 SM00490 helicase superfamily c-terminal domain FD63_RS17020 SM00883 Chaperonin 10 Kd subunit FD63_RS17055 SM00878 Biotin carboxylase C-terminal domain FD63_RS17085 SM00530 Helix-turn-helix XRE-family like proteins FD63_RS17110 SM00563 Phosphate acyltransferases FD63_RS17135 SM00798 AICARFT/IMPCHase bienzyme FD63_RS17135 SM00851 MGS-like domain FD63_RS17140 SM01209 FD63_RS17140 FD63_RS17140 SM01210 FD63_RS17140 FD63_RS17160 SM00563 Phosphate acyltransferases FD63_RS17215 SM00052 Putative diguanylate phosphodiesterase FD63_RS17215 SM00267 diguanylate cyclase FD63_RS17215 SM00448 cheY-homologous receiver domain FD63_RS17220 SM00387 Histidine kinase-like ATPases FD63_RS17220 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS17220 SM00448 cheY-homologous receiver domain FD63_RS17280 SM00100 Cyclic nucleotide-monophosphate binding domain FD63_RS17280 SM00419 helix_turn_helix, cAMP Regulatory protein FD63_RS17325 SM00046 Diacylglycerol kinase catalytic domain (presumed) FD63_RS17340 SM00271 DnaJ molecular chaperone homology domain FD63_RS17415 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_RS17450 SM00861 Transketolase, pyrimidine binding domain FD63_RS17455 SM00326 Src homology 3 domains FD63_RS17480 SM01126 FD63_RS17480 FD63_RS17490 SM00487 DEAD-like helicases superfamily FD63_RS17490 SM00490 helicase superfamily c-terminal domain FD63_RS17510 SM00267 diguanylate cyclase FD63_RS17520 SM01120 FD63_RS17520 FD63_RS17540 SM00829 Enoylreductase FD63_RS17550 SM00965 Secretin and TonB N terminus short domain FD63_RS17575 SM00345 helix_turn_helix gluconate operon transcriptional repressor FD63_RS17575 SM00895 FD63_RS17575 FD63_RS17585 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. FD63_RS17620 SM00346 helix_turn_helix isocitrate lyase regulation FD63_RS17635 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_RS17690 SM00420 helix_turn_helix, Deoxyribose operon repressor FD63_RS17690 SM01134 FD63_RS17690 FD63_RS17730 SM00563 Phosphate acyltransferases FD63_RS17780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. FD63_RS17815 SM01060 FD63_RS17815 FD63_RS17825 SM00421 helix_turn_helix, Lux Regulon FD63_RS17840 SM00382 ATPases associated with a variety of cellular activities FD63_RS17875 SM00849 Metallo-beta-lactamase superfamily FD63_RS17945 SM00387 Histidine kinase-like ATPases FD63_RS17950 SM00448 cheY-homologous receiver domain FD63_RS17950 SM00862 Transcriptional regulatory protein, C terminal FD63_RS18000 SM00448 cheY-homologous receiver domain FD63_RS18000 SM00862 Transcriptional regulatory protein, C terminal FD63_RS18005 SM00387 Histidine kinase-like ATPases FD63_RS18080 SM00347 helix_turn_helix multiple antibiotic resistance protein FD63_RS18105 SM00833 Cobalamin synthesis protein cobW C-terminal domain FD63_RS18145 SM00878 Biotin carboxylase C-terminal domain FD63_RS18160 SM00881 CoA binding domain FD63_RS18175 SM00448 cheY-homologous receiver domain FD63_RS18175 SM00862 Transcriptional regulatory protein, C terminal FD63_RS18180 SM00387 Histidine kinase-like ATPases FD63_RS18180 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS18195 SM00248 ankyrin repeats FD63_RS18205 SM00825 Beta-ketoacyl synthase FD63_RS18225 SM00822 FD63_RS18225 FD63_RS18255 SM00563 Phosphate acyltransferases FD63_RS18330 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs FD63_RS18330 SM00474 3'-5' exonuclease FD63_RS18330 SM00475 5'-3' exonuclease FD63_RS18330 SM00482 DNA polymerase A domain FD63_RS18350 SM01266 FD63_RS18350 FD63_RS18375 SM00155 Phospholipase D. Active site motifs. FD63_RS18405 SM01321 FD63_RS18405 FD63_RS18410 SM01259 FD63_RS18410 FD63_RS18425 SM00470 ParB-like nuclease domain FD63_RS18495 SM00421 helix_turn_helix, Lux Regulon FD63_RS18495 SM00448 cheY-homologous receiver domain FD63_RS18505 SM00091 PAS domain FD63_RS18505 SM00387 Histidine kinase-like ATPases FD63_RS18505 SM00388 His Kinase A (phosphoacceptor) domain FD63_RS18505 SM00448 cheY-homologous receiver domain FD63_RS18610 SM00912 haemagglutination activity domain FD63_RS18625 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family FD63_RS18640 SM00354 helix_turn _helix lactose operon repressor FD63_RS18650 SM00563 Phosphate acyltransferases FD63_RS18685 SM00633 Glycosyl hydrolase family 10 FD63_RS18695 SM00633 Glycosyl hydrolase family 10 FD63_RS18740 SM00758 FD63_RS18740 FD63_RS18740 SM01217 FD63_RS18740 FD63_RS18750 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain FD63_RS18765 SM00354 helix_turn _helix lactose operon repressor FD63_RS18840 SM00382 ATPases associated with a variety of cellular activities FD63_RS18855 SM00836 DALR anticodon binding domain FD63_RS18870 SM00671 Sel1-like repeats. FD63_RS18885 SM00220 Serine/Threonine protein kinases, catalytic domain FD63_RS18900 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain FD63_RS18900 SM01232 FD63_RS18900 FD63_RS18915 SM00382 ATPases associated with a variety of cellular activities