locus-tag class description NX08_RS00010 PF00308 Bacterial dnaA protein NX08_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix NX08_RS00010 PF11638 DnaA N-terminal domain NX08_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain NX08_RS00015 PF02767 DNA polymerase III beta subunit, central domain NX08_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain NX08_RS00020 PF02463 RecF/RecN/SMC N terminal domain NX08_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus NX08_RS00025 PF01751 Toprim domain NX08_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS00025 PF18053 DNA gyrase B subunit insert domain NX08_RS00025 PF00204 DNA gyrase B NX08_RS00035 PF01435 Peptidase family M48 NX08_RS00045 PF03544 Gram-negative bacterial TonB protein C-terminal NX08_RS00050 PF01618 MotA/TolQ/ExbB proton channel family NX08_RS00055 PF02472 Biopolymer transport protein ExbD/TolR NX08_RS00060 PF02472 Biopolymer transport protein ExbD/TolR NX08_RS00065 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ NX08_RS00075 PF13396 Phospholipase_D-nuclease N-terminal NX08_RS00075 PF13091 PLD-like domain NX08_RS00080 PF04055 Radical SAM superfamily NX08_RS00090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) NX08_RS00105 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NX08_RS00105 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NX08_RS00110 PF13180 PDZ domain NX08_RS00110 PF03572 Peptidase family S41 NX08_RS00115 PF01551 Peptidase family M23 NX08_RS00125 PF04389 Peptidase family M28 NX08_RS00135 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_RS00150 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_RS00155 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_RS00165 PF00107 Zinc-binding dehydrogenase NX08_RS00165 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS00180 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS00180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster NX08_RS00185 PF00310 Glutamine amidotransferases class-II NX08_RS00185 PF04898 Glutamate synthase central domain NX08_RS00185 PF01493 GXGXG motif NX08_RS00185 PF01645 Conserved region in glutamate synthase NX08_RS00205 PF01804 Penicillin amidase NX08_RS00265 PF09369 Domain of unknown function (DUF1998) NX08_RS00265 PF00270 DEAD/DEAH box helicase NX08_RS00265 PF00271 Helicase conserved C-terminal domain NX08_RS00270 PF03006 Haemolysin-III related NX08_RS00315 PF00293 NUDIX domain NX08_RS00320 PF07859 alpha/beta hydrolase fold NX08_RS00330 PF00085 Thioredoxin NX08_RS00340 PF00083 Sugar (and other) transporter NX08_RS00340 PF08946 Osmosensory transporter coiled coil NX08_RS00375 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain NX08_RS00380 PF00155 Aminotransferase class I and II NX08_RS00385 PF00593 TonB dependent receptor NX08_RS00385 PF07715 TonB-dependent Receptor Plug Domain NX08_RS00405 PF02735 Ku70/Ku80 beta-barrel domain NX08_RS00410 PF01070 FMN-dependent dehydrogenase NX08_RS00440 PF07055 Enoyl reductase FAD binding domain NX08_RS00440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase NX08_RS00440 PF12241 Trans-2-enoyl-CoA reductase catalytic region NX08_RS00450 PF00294 pfkB family carbohydrate kinase NX08_RS00510 PF00128 Alpha amylase, catalytic domain NX08_RS00510 PF11896 Domain of unknown function (DUF3416) NX08_RS00515 PF00128 Alpha amylase, catalytic domain NX08_RS00515 PF16657 Maltogenic Amylase, C-terminal domain NX08_RS00520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_RS00520 PF02806 Alpha amylase, C-terminal all-beta domain NX08_RS00520 PF00128 Alpha amylase, catalytic domain NX08_RS00530 PF00248 Aldo/keto reductase family NX08_RS00535 PF00135 Carboxylesterase family NX08_RS00540 PF13472 GDSL-like Lipase/Acylhydrolase family NX08_RS00540 PF07859 alpha/beta hydrolase fold NX08_RS00560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component NX08_RS00570 PF00356 Bacterial regulatory proteins, lacI family NX08_RS00575 PF04962 KduI/IolB family NX08_RS00590 PF00657 GDSL-like Lipase/Acylhydrolase NX08_RS00600 PF00351 Biopterin-dependent aromatic amino acid hydroxylase NX08_RS00605 PF01037 Lrp/AsnC ligand binding domain NX08_RS00610 PF07715 TonB-dependent Receptor Plug Domain NX08_RS00610 PF07660 Secretin and TonB N terminus short domain NX08_RS00610 PF00593 TonB dependent receptor NX08_RS00625 PF01734 Patatin-like phospholipase NX08_RS00630 PF07687 Peptidase dimerisation domain NX08_RS00630 PF01546 Peptidase family M20/M25/M40 NX08_RS00640 PF00005 ABC transporter NX08_RS00655 PF00571 CBS domain NX08_RS00655 PF00005 ABC transporter NX08_RS00660 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS00670 PF03781 Sulfatase-modifying factor enzyme 1 NX08_RS00670 PF12867 DinB superfamily NX08_RS00710 PF10609 NUBPL iron-transfer P-loop NTPase NX08_RS00710 PF01883 Iron-sulfur cluster assembly protein NX08_RS00725 PF13091 PLD-like domain NX08_RS00730 PF03061 Thioesterase superfamily NX08_RS00775 PF02673 Bacitracin resistance protein BacA NX08_RS00780 PF00120 Glutamine synthetase, catalytic domain NX08_RS00780 PF03951 Glutamine synthetase, beta-Grasp domain NX08_RS00785 PF00543 Nitrogen regulatory protein P-II NX08_RS00790 PF00909 Ammonium Transporter Family NX08_RS00795 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS00795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS00795 PF00989 PAS fold NX08_RS00800 PF00158 Sigma-54 interaction domain NX08_RS00800 PF00072 Response regulator receiver domain NX08_RS00800 PF02954 Bacterial regulatory protein, Fis family NX08_RS00805 PF00080 Copper/zinc superoxide dismutase (SODC) NX08_RS00820 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_RS00830 PF00108 Thiolase, N-terminal domain NX08_RS00830 PF02803 Thiolase, C-terminal domain NX08_RS00870 PF00581 Rhodanese-like domain NX08_RS00875 PF02556 Preprotein translocase subunit SecB NX08_RS00880 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus NX08_RS00880 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NX08_RS00890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NX08_RS00890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NX08_RS00890 PF00205 Thiamine pyrophosphate enzyme, central domain NX08_RS00895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS00900 PF00158 Sigma-54 interaction domain NX08_RS00900 PF00072 Response regulator receiver domain NX08_RS00900 PF02954 Bacterial regulatory protein, Fis family NX08_RS00915 PF07690 Major Facilitator Superfamily NX08_RS00920 PF00588 SpoU rRNA Methylase family NX08_RS00935 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_RS00935 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_RS00940 PF13784 Fic/DOC family N-terminal NX08_RS00940 PF02661 Fic/DOC family NX08_RS00945 PF00561 alpha/beta hydrolase fold NX08_RS00950 PF03692 Putative zinc- or iron-chelating domain NX08_RS00955 PF00501 AMP-binding enzyme NX08_RS00960 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NX08_RS00980 PF01820 D-ala D-ala ligase N-terminus NX08_RS00980 PF07478 D-ala D-ala ligase C-terminus NX08_RS00990 PF03109 ABC1 family NX08_RS00995 PF01596 O-methyltransferase NX08_RS01000 PF00849 RNA pseudouridylate synthase NX08_RS01010 PF00472 RF-1 domain NX08_RS01020 PF01112 Asparaginase NX08_RS01025 PF01432 Peptidase family M3 NX08_RS01035 PF12706 Beta-lactamase superfamily domain NX08_RS01050 PF12833 Helix-turn-helix domain NX08_RS01055 PF00999 Sodium/hydrogen exchanger family NX08_RS01060 PF03466 LysR substrate binding domain NX08_RS01060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS01065 PF01274 Malate synthase NX08_RS01070 PF00463 Isocitrate lyase family NX08_RS01075 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS01100 PF00364 Biotin-requiring enzyme NX08_RS01100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NX08_RS01100 PF18140 Propionyl-coenzyme A carboxylase BT domain NX08_RS01100 PF00289 Biotin carboxylase, N-terminal domain NX08_RS01100 PF02785 Biotin carboxylase C-terminal domain NX08_RS01105 PF01039 Carboxyl transferase domain NX08_RS01110 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS01110 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS01110 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS01165 PF02492 CobW/HypB/UreG, nucleotide-binding domain NX08_RS01165 PF07683 Cobalamin synthesis protein cobW C-terminal domain NX08_RS01185 PF03969 AFG1-like ATPase NX08_RS01195 PF01047 MarR family NX08_RS01200 PF02566 OsmC-like protein NX08_RS01220 PF00248 Aldo/keto reductase family NX08_RS01230 PF00248 Aldo/keto reductase family NX08_RS01240 PF00849 RNA pseudouridylate synthase NX08_RS01250 PF00270 DEAD/DEAH box helicase NX08_RS01250 PF08482 ATP-dependent helicase C-terminal NX08_RS01250 PF04408 Helicase associated domain (HA2) NX08_RS01250 PF00271 Helicase conserved C-terminal domain NX08_RS01255 PF07308 Protein of unknown function (DUF1456) NX08_RS01260 PF00576 HIUase/Transthyretin family NX08_RS01270 PF01014 Uricase NX08_RS01270 PF09349 OHCU decarboxylase NX08_RS01285 PF00266 Aminotransferase class-V NX08_RS01290 PF01546 Peptidase family M20/M25/M40 NX08_RS01290 PF07687 Peptidase dimerisation domain NX08_RS01315 PF01425 Amidase NX08_RS01320 PF01156 Inosine-uridine preferring nucleoside hydrolase NX08_RS01330 PF00860 Permease family NX08_RS01335 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_RS01335 PF00175 Oxidoreductase NAD-binding domain NX08_RS01340 PF00355 Rieske [2Fe-2S] domain NX08_RS01345 PF03466 LysR substrate binding domain NX08_RS01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS01350 PF01026 TatD related DNase NX08_RS01385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS01385 PF03466 LysR substrate binding domain NX08_RS01390 PF07690 Major Facilitator Superfamily NX08_RS01395 PF00106 short chain dehydrogenase NX08_RS01405 PF02146 Sir2 family NX08_RS01410 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NX08_RS01415 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NX08_RS01415 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NX08_RS01430 PF00551 Formyl transferase NX08_RS01435 PF00486 Transcriptional regulatory protein, C terminal NX08_RS01435 PF00072 Response regulator receiver domain NX08_RS01455 PF02677 Epoxyqueuosine reductase QueH NX08_RS01460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS01460 PF03466 LysR substrate binding domain NX08_RS01465 PF03358 NADPH-dependent FMN reductase NX08_RS01475 PF08267 Cobalamin-independent synthase, N-terminal domain NX08_RS01475 PF01717 Cobalamin-independent synthase, Catalytic domain NX08_RS01480 PF03812 2-keto-3-deoxygluconate permease NX08_RS01495 PF05368 NmrA-like family NX08_RS01500 PF01638 HxlR-like helix-turn-helix NX08_RS01530 PF00589 Phage integrase family NX08_RS01530 PF13495 Phage integrase, N-terminal SAM-like domain NX08_RS01535 PF00920 Dehydratase family NX08_RS01550 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS01560 PF07690 Major Facilitator Superfamily NX08_RS01565 PF01966 HD domain NX08_RS01565 PF11871 Domain of unknown function (DUF3391) NX08_RS01585 PF00171 Aldehyde dehydrogenase family NX08_RS01595 PF01494 FAD binding domain NX08_RS01605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NX08_RS01605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NX08_RS01610 PF00230 Major intrinsic protein NX08_RS01615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase NX08_RS01615 PF01266 FAD dependent oxidoreductase NX08_RS01620 PF08220 DeoR-like helix-turn-helix domain NX08_RS01620 PF00455 DeoR C terminal sensor domain NX08_RS01625 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_RS01625 PF00175 Oxidoreductase NAD-binding domain NX08_RS01635 PF01144 Coenzyme A transferase NX08_RS01640 PF01144 Coenzyme A transferase NX08_RS01645 PF02803 Thiolase, C-terminal domain NX08_RS01645 PF00108 Thiolase, N-terminal domain NX08_RS01650 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal NX08_RS01650 PF00775 Dioxygenase NX08_RS01660 PF00206 Lyase NX08_RS01660 PF10397 Adenylosuccinate lyase C-terminus NX08_RS01665 PF12146 Serine aminopeptidase, S33 NX08_RS01670 PF02627 Carboxymuconolactone decarboxylase family NX08_RS01675 PF01614 Bacterial transcriptional regulator NX08_RS01675 PF09339 IclR helix-turn-helix domain NX08_RS01685 PF07859 alpha/beta hydrolase fold NX08_RS01690 PF13932 GidA associated domain NX08_RS01690 PF01134 Glucose inhibited division protein A NX08_RS01700 PF00291 Pyridoxal-phosphate dependent enzyme NX08_RS01725 PF13649 Methyltransferase domain NX08_RS01735 PF12697 Alpha/beta hydrolase family NX08_RS01745 PF00155 Aminotransferase class I and II NX08_RS01750 PF04055 Radical SAM superfamily NX08_RS01750 PF06968 Biotin and Thiamin Synthesis associated domain NX08_RS01790 PF01040 UbiA prenyltransferase family NX08_RS01810 PF05819 NolX protein NX08_RS01850 PF01313 Bacterial export proteins, family 3 NX08_RS01855 PF00813 FliP family NX08_RS01870 PF00771 FHIPEP family NX08_RS01875 PF01312 FlhB HrpN YscU SpaS Family NX08_RS01890 PF01514 Secretory protein of YscJ/FliF family NX08_RS01905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_RS01905 PF02874 ATP synthase alpha/beta family, beta-barrel domain NX08_RS01905 PF18269 T3SS EscN ATPase C-terminal domain NX08_RS01920 PF00263 Bacterial type II and III secretion system protein NX08_RS01920 PF03958 Bacterial type II/III secretion system short domain NX08_RS01935 PF01464 Transglycosylase SLT domain NX08_RS01950 PF12794 Mechanosensitive ion channel inner membrane domain 1 NX08_RS01950 PF00924 Mechanosensitive ion channel NX08_RS01950 PF12795 Mechanosensitive ion channel porin domain NX08_RS01955 PF00884 Sulfatase NX08_RS01965 PF03109 ABC1 family NX08_RS01970 PF05661 Protein of unknown function (DUF808) NX08_RS01975 PF02638 Glycosyl hydrolase-like 10 NX08_RS01980 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS01985 PF08323 Starch synthase catalytic domain NX08_RS01985 PF00534 Glycosyl transferases group 1 NX08_RS01990 PF00128 Alpha amylase, catalytic domain NX08_RS01990 PF02806 Alpha amylase, C-terminal all-beta domain NX08_RS01990 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_RS01995 PF11941 Domain of unknown function (DUF3459) NX08_RS01995 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_RS01995 PF00128 Alpha amylase, catalytic domain NX08_RS02000 PF02446 4-alpha-glucanotransferase NX08_RS02005 PF00128 Alpha amylase, catalytic domain NX08_RS02015 PF00128 Alpha amylase, catalytic domain NX08_RS02015 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_RS02035 PF06903 VirK protein NX08_RS02065 PF02817 e3 binding domain NX08_RS02065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NX08_RS02065 PF00364 Biotin-requiring enzyme NX08_RS02075 PF02780 Transketolase, C-terminal domain NX08_RS02075 PF02779 Transketolase, pyrimidine binding domain NX08_RS02080 PF00676 Dehydrogenase E1 component NX08_RS02095 PF03301 Tryptophan 2,3-dioxygenase NX08_RS02105 PF00854 POT family NX08_RS02115 PF01047 MarR family NX08_RS02120 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_RS02125 PF04209 homogentisate 1,2-dioxygenase NX08_RS02165 PF03334 Na+/H+ antiporter subunit NX08_RS02170 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) NX08_RS02180 PF00361 Proton-conducting membrane transporter NX08_RS02185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NX08_RS02190 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter NX08_RS02190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NX08_RS02190 PF13244 Domain of unknown function (DUF4040) NX08_RS02190 PF00361 Proton-conducting membrane transporter NX08_RS02255 PF01259 SAICAR synthetase NX08_RS02260 PF00226 DnaJ domain NX08_RS02260 PF05099 Tellurite resistance protein TerB NX08_RS02270 PF00834 Ribulose-phosphate 3 epimerase family NX08_RS02275 PF00583 Acetyltransferase (GNAT) family NX08_RS02280 PF00781 Diacylglycerol kinase catalytic domain NX08_RS02290 PF04715 Anthranilate synthase component I, N terminal region NX08_RS02290 PF00425 chorismate binding enzyme NX08_RS02305 PF00117 Glutamine amidotransferase class-I NX08_RS02315 PF02885 Glycosyl transferase family, helical bundle domain NX08_RS02315 PF00591 Glycosyl transferase family, a/b domain NX08_RS02320 PF00218 Indole-3-glycerol phosphate synthase NX08_RS02330 PF00027 Cyclic nucleotide-binding domain NX08_RS02330 PF00325 Bacterial regulatory proteins, crp family NX08_RS02335 PF02675 S-adenosylmethionine decarboxylase NX08_RS02340 PF00893 Small Multidrug Resistance protein NX08_RS02345 PF03232 Ubiquinone biosynthesis protein COQ7 NX08_RS02350 PF00572 Ribosomal protein L13 NX08_RS02355 PF00380 Ribosomal protein S9/S16 NX08_RS02370 PF00293 NUDIX domain NX08_RS02380 PF00210 Ferritin-like domain NX08_RS02385 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_RS02385 PF00072 Response regulator receiver domain NX08_RS02385 PF01627 Hpt domain NX08_RS02385 PF00672 HAMP domain NX08_RS02385 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS02385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS02390 PF00072 Response regulator receiver domain NX08_RS02390 PF00486 Transcriptional regulatory protein, C terminal NX08_RS02410 PF01521 Iron-sulphur cluster biosynthesis NX08_RS02420 PF00293 NUDIX domain NX08_RS02420 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain NX08_RS02420 PF09297 NADH pyrophosphatase zinc ribbon domain NX08_RS02425 PF17113 Regulatory signalling modulator protein AmpE NX08_RS02425 PF03186 CobD/Cbib protein NX08_RS02445 PF07690 Major Facilitator Superfamily NX08_RS02450 PF03466 LysR substrate binding domain NX08_RS02450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS02455 PF07690 Major Facilitator Superfamily NX08_RS02460 PF12805 FUSC-like inner membrane protein yccS NX08_RS02465 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain NX08_RS02465 PF02844 Phosphoribosylglycinamide synthetase, N domain NX08_RS02465 PF02843 Phosphoribosylglycinamide synthetase, C domain NX08_RS02475 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system NX08_RS02480 PF02142 MGS-like domain NX08_RS02480 PF01808 AICARFT/IMPCHase bienzyme NX08_RS02505 PF02954 Bacterial regulatory protein, Fis family NX08_RS02520 PF01381 Helix-turn-helix NX08_RS02555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NX08_RS02555 PF00289 Biotin carboxylase, N-terminal domain NX08_RS02555 PF02785 Biotin carboxylase C-terminal domain NX08_RS02565 PF00364 Biotin-requiring enzyme NX08_RS02570 PF01220 Dehydroquinase class II NX08_RS02575 PF11412 Disulphide bond corrector protein DsbC NX08_RS02575 PF02683 Cytochrome C biogenesis protein transmembrane region NX08_RS02580 PF03091 CutA1 divalent ion tolerance protein NX08_RS02590 PF04231 Endonuclease I NX08_RS02600 PF00166 Chaperonin 10 Kd subunit NX08_RS02605 PF00118 TCP-1/cpn60 chaperonin family NX08_RS02630 PF00793 DAHP synthetase I family NX08_RS02650 PF08450 SMP-30/Gluconolactonase/LRE-like region NX08_RS02660 PF03710 Glutamate-ammonia ligase adenylyltransferase NX08_RS02660 PF08335 GlnD PII-uridylyltransferase NX08_RS02700 PF00881 Nitroreductase family NX08_RS02705 PF04264 YceI-like domain NX08_RS02740 PF16957 Malonate decarboxylase, alpha subunit, transporter NX08_RS02745 PF06857 Malonate decarboxylase delta subunit (MdcD) NX08_RS02750 PF01039 Carboxyl transferase domain NX08_RS02760 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG NX08_RS02765 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase NX08_RS02770 PF00698 Acyl transferase domain NX08_RS02770 PF16197 Ketoacyl-synthetase C-terminal extension NX08_RS02770 PF00550 Phosphopantetheine attachment site NX08_RS02770 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS02770 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS02770 PF08659 KR domain NX08_RS02780 PF07729 FCD domain NX08_RS02780 PF00392 Bacterial regulatory proteins, gntR family NX08_RS02785 PF13419 Haloacid dehalogenase-like hydrolase NX08_RS02815 PF07745 Glycosyl hydrolase family 53 NX08_RS02825 PF17831 Pyruvate dehydrogenase E1 component middle domain NX08_RS02825 PF00456 Transketolase, thiamine diphosphate binding domain NX08_RS02835 PF00929 Exonuclease NX08_RS02835 PF07733 Bacterial DNA polymerase III alpha NTPase domain NX08_RS02835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NX08_RS02835 PF14579 Helix-hairpin-helix motif NX08_RS02835 PF02811 PHP domain NX08_RS02900 PF00106 short chain dehydrogenase NX08_RS02905 PF13409 Glutathione S-transferase, N-terminal domain NX08_RS02945 PF07759 Protein of unknown function (DUF1615) NX08_RS02950 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS02980 PF00892 EamA-like transporter family NX08_RS02985 PF00497 Bacterial extracellular solute-binding proteins, family 3 NX08_RS03000 PF03330 Lytic transglycolase NX08_RS03010 PF00324 Amino acid permease NX08_RS03020 PF01544 CorA-like Mg2+ transporter protein NX08_RS03040 PF01204 Trehalase NX08_RS03050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NX08_RS03050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NX08_RS03050 PF06827 Zinc finger found in FPG and IleRS NX08_RS03075 PF08448 PAS fold NX08_RS03075 PF00563 EAL domain NX08_RS03075 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS03075 PF08447 PAS fold NX08_RS03085 PF00553 Cellulose binding domain NX08_RS03085 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_RS03090 PF01740 STAS domain NX08_RS03090 PF00916 Sulfate permease family NX08_RS03115 PF13632 Glycosyl transferase family group 2 NX08_RS03125 PF07694 5TMR of 5TMR-LYT NX08_RS03125 PF06580 Histidine kinase NX08_RS03130 PF04397 LytTr DNA-binding domain NX08_RS03130 PF00072 Response regulator receiver domain NX08_RS03135 PF03900 Porphobilinogen deaminase, C-terminal domain NX08_RS03135 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain NX08_RS03165 PF00326 Prolyl oligopeptidase family NX08_RS03165 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NX08_RS03175 PF00155 Aminotransferase class I and II NX08_RS03185 PF00326 Prolyl oligopeptidase family NX08_RS03185 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain NX08_RS03190 PF04304 Protein of unknown function (DUF454) NX08_RS03200 PF01678 Diaminopimelate epimerase NX08_RS03210 PF00589 Phage integrase family NX08_RS03210 PF02899 Phage integrase, N-terminal SAM-like domain NX08_RS03220 PF00227 Proteasome subunit NX08_RS03225 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS03225 PF07724 AAA domain (Cdc48 subfamily) NX08_RS03225 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_RS03235 PF13673 Acetyltransferase (GNAT) domain NX08_RS03240 PF13533 Biotin-lipoyl like NX08_RS03250 PF01209 ubiE/COQ5 methyltransferase family NX08_RS03260 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS03260 PF03707 Bacterial signalling protein N terminal repeat NX08_RS03260 PF00563 EAL domain NX08_RS03265 PF01433 Peptidase family M1 domain NX08_RS03265 PF11838 ERAP1-like C-terminal domain NX08_RS03300 PF01925 Sulfite exporter TauE/SafE NX08_RS03305 PF00171 Aldehyde dehydrogenase family NX08_RS03310 PF13537 Glutamine amidotransferase domain NX08_RS03310 PF00733 Asparagine synthase NX08_RS03315 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS03315 PF12804 MobA-like NTP transferase domain NX08_RS03325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NX08_RS03325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NX08_RS03355 PF00294 pfkB family carbohydrate kinase NX08_RS03365 PF04085 rod shape-determining protein MreC NX08_RS03375 PF03717 Penicillin-binding Protein dimerisation domain NX08_RS03375 PF00905 Penicillin binding protein transpeptidase domain NX08_RS03380 PF01098 Cell cycle protein NX08_RS03395 PF00553 Cellulose binding domain NX08_RS03395 PF00041 Fibronectin type III domain NX08_RS03395 PF01341 Glycosyl hydrolases family 6 NX08_RS03425 PF00295 Glycosyl hydrolases family 28 NX08_RS03430 PF13406 Transglycosylase SLT domain NX08_RS03435 PF03330 Lytic transglycolase NX08_RS03435 PF05036 Sporulation related domain NX08_RS03440 PF07943 Penicillin-binding protein 5, C-terminal domain NX08_RS03440 PF00768 D-alanyl-D-alanine carboxypeptidase NX08_RS03450 PF04359 Protein of unknown function (DUF493) NX08_RS03455 PF03099 Biotin/lipoate A/B protein ligase family NX08_RS03460 PF04055 Radical SAM superfamily NX08_RS03460 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family NX08_RS03465 PF03572 Peptidase family S41 NX08_RS03465 PF17804 Tail specific protease N-terminal domain NX08_RS03465 PF00595 PDZ domain NX08_RS03465 PF11818 C-terminal domain of tail specific protease (DUF3340) NX08_RS03475 PF01467 Cytidylyltransferase-like NX08_RS03475 PF00293 NUDIX domain NX08_RS03510 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain NX08_RS03510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NX08_RS03520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NX08_RS03520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NX08_RS03525 PF04972 BON domain NX08_RS03530 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS03530 PF08446 PAS fold NX08_RS03530 PF00360 Phytochrome region NX08_RS03530 PF01590 GAF domain NX08_RS03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS03535 PF00072 Response regulator receiver domain NX08_RS03540 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS03545 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NX08_RS03580 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NX08_RS03580 PF00703 Glycosyl hydrolases family 2 NX08_RS03580 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NX08_RS03580 PF02837 Glycosyl hydrolases family 2, sugar binding domain NX08_RS03580 PF16355 Domain of unknown function (DUF4982) NX08_RS03595 PF07702 UTRA domain NX08_RS03595 PF00392 Bacterial regulatory proteins, gntR family NX08_RS03600 PF07690 Major Facilitator Superfamily NX08_RS03605 PF00356 Bacterial regulatory proteins, lacI family NX08_RS03610 PF01380 SIS domain NX08_RS03615 PF01979 Amidohydrolase family NX08_RS03630 PF00535 Glycosyl transferase family 2 NX08_RS03635 PF14883 Hypothetical glycosyl hydrolase family 13 NX08_RS03635 PF01522 Polysaccharide deacetylase NX08_RS03650 PF01966 HD domain NX08_RS03650 PF12627 Probable RNA and SrmB- binding site of polymerase A NX08_RS03650 PF01743 Poly A polymerase head domain NX08_RS03655 PF01464 Transglycosylase SLT domain NX08_RS03655 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain NX08_RS03660 PF07715 TonB-dependent Receptor Plug Domain NX08_RS03660 PF00593 TonB dependent receptor NX08_RS03705 PF10458 Valyl tRNA synthetase tRNA binding arm NX08_RS03705 PF00133 tRNA synthetases class I (I, L, M and V) NX08_RS03705 PF08264 Anticodon-binding domain of tRNA NX08_RS03720 PF02789 Cytosol aminopeptidase family, N-terminal domain NX08_RS03720 PF00883 Cytosol aminopeptidase family, catalytic domain NX08_RS03730 PF03739 Lipopolysaccharide export system permease LptF/LptG NX08_RS03740 PF00589 Phage integrase family NX08_RS03740 PF02899 Phage integrase, N-terminal SAM-like domain NX08_RS03745 PF10411 Disulfide bond isomerase protein N-terminus NX08_RS03745 PF13098 Thioredoxin-like domain NX08_RS03760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal NX08_RS03760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain NX08_RS03760 PF02769 AIR synthase related protein, C-terminal domain NX08_RS03770 PF05658 Head domain of trimeric autotransporter adhesin NX08_RS03770 PF05662 Coiled stalk of trimeric autotransporter adhesin NX08_RS03770 PF03895 YadA-like membrane anchor domain NX08_RS03770 PF13018 Extended Signal Peptide of Type V secretion system NX08_RS03775 PF00082 Subtilase family NX08_RS03785 PF00437 Type II/IV secretion system protein NX08_RS03785 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NX08_RS03795 PF00482 Type II secretion system (T2SS), protein F NX08_RS03800 PF08334 Type II secretion system (T2SS), protein G NX08_RS03805 PF12019 Type II transport protein GspH NX08_RS03810 PF07963 Prokaryotic N-terminal methylation motif NX08_RS03820 PF03934 Type II secretion system (T2SS), protein K NX08_RS03825 PF05137 Fimbrial assembly protein (PilN) NX08_RS03830 PF10741 Type II secretion system (T2SS), protein M subtype b NX08_RS03840 PF00263 Bacterial type II and III secretion system protein NX08_RS03840 PF03958 Bacterial type II/III secretion system short domain NX08_RS03850 PF00392 Bacterial regulatory proteins, gntR family NX08_RS03850 PF07702 UTRA domain NX08_RS03860 PF00593 TonB dependent receptor NX08_RS03860 PF07715 TonB-dependent Receptor Plug Domain NX08_RS03905 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family NX08_RS03905 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain NX08_RS03925 PF03960 ArsC family NX08_RS03935 PF01327 Polypeptide deformylase NX08_RS03940 PF00005 ABC transporter NX08_RS03940 PF12848 ABC transporter NX08_RS03965 PF00464 Serine hydroxymethyltransferase NX08_RS03970 PF03477 ATP cone domain NX08_RS03980 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region NX08_RS03980 PF01872 RibD C-terminal domain NX08_RS03990 PF00677 Lumazine binding domain NX08_RS03995 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase NX08_RS03995 PF00925 GTP cyclohydrolase II NX08_RS04000 PF00885 6,7-dimethyl-8-ribityllumazine synthase NX08_RS04005 PF01029 NusB family NX08_RS04010 PF00586 AIR synthase related protein, N-terminal domain NX08_RS04010 PF02769 AIR synthase related protein, C-terminal domain NX08_RS04050 PF03814 Potassium-transporting ATPase A subunit NX08_RS04060 PF02669 K+-transporting ATPase, c chain NX08_RS04065 PF02702 Osmosensitive K+ channel His kinase sensor domain NX08_RS04065 PF13492 GAF domain NX08_RS04065 PF13493 Domain of unknown function (DUF4118) NX08_RS04065 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS04065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS04070 PF00072 Response regulator receiver domain NX08_RS04070 PF00486 Transcriptional regulatory protein, C terminal NX08_RS04075 PF02913 FAD linked oxidases, C-terminal domain NX08_RS04075 PF01565 FAD binding domain NX08_RS04080 PF04307 LexA-binding, inner membrane-associated putative hydrolase NX08_RS04085 PF02021 Uncharacterised protein family UPF0102 NX08_RS04095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NX08_RS04125 PF02381 MraZ protein, putative antitoxin-like NX08_RS04130 PF01795 MraW methylase family NX08_RS04135 PF04999 Cell division protein FtsL NX08_RS04140 PF03717 Penicillin-binding Protein dimerisation domain NX08_RS04140 PF00905 Penicillin binding protein transpeptidase domain NX08_RS04145 PF08245 Mur ligase middle domain NX08_RS04145 PF01225 Mur ligase family, catalytic domain NX08_RS04145 PF02875 Mur ligase family, glutamate ligase domain NX08_RS04150 PF01225 Mur ligase family, catalytic domain NX08_RS04150 PF02875 Mur ligase family, glutamate ligase domain NX08_RS04150 PF08245 Mur ligase middle domain NX08_RS04155 PF00953 Glycosyl transferase family 4 NX08_RS04160 PF01098 Cell cycle protein NX08_RS04165 PF03033 Glycosyltransferase family 28 N-terminal domain NX08_RS04165 PF04101 Glycosyltransferase family 28 C-terminal domain NX08_RS04170 PF08245 Mur ligase middle domain NX08_RS04170 PF01225 Mur ligase family, catalytic domain NX08_RS04170 PF02875 Mur ligase family, glutamate ligase domain NX08_RS04175 PF01820 D-ala D-ala ligase N-terminus NX08_RS04175 PF07478 D-ala D-ala ligase C-terminus NX08_RS04180 PF08478 POTRA domain, FtsQ-type NX08_RS04180 PF03799 Cell division protein FtsQ NX08_RS04185 PF02491 SHS2 domain inserted in FTSA NX08_RS04190 PF12327 FtsZ family, C-terminal domain NX08_RS04190 PF00091 Tubulin/FtsZ family, GTPase domain NX08_RS04195 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase NX08_RS04205 PF08525 Opacity-associated protein A N-terminal motif NX08_RS04205 PF01551 Peptidase family M23 NX08_RS04205 PF01476 LysM domain NX08_RS04210 PF02810 SEC-C motif NX08_RS04210 PF07517 SecA DEAD-like domain NX08_RS04210 PF01043 SecA preprotein cross-linking domain NX08_RS04210 PF07516 SecA Wing and Scaffold domain NX08_RS04215 PF00293 NUDIX domain NX08_RS04230 PF02219 Methylenetetrahydrofolate reductase NX08_RS04240 PF14765 Polyketide synthase dehydratase NX08_RS04240 PF00550 Phosphopantetheine attachment site NX08_RS04240 PF08659 KR domain NX08_RS04240 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS04240 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS04240 PF16197 Ketoacyl-synthetase C-terminal extension NX08_RS04240 PF00107 Zinc-binding dehydrogenase NX08_RS04240 PF00698 Acyl transferase domain NX08_RS04240 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS04245 PF00082 Subtilase family NX08_RS04245 PF09286 Pro-kumamolisin, activation domain NX08_RS04265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NX08_RS04300 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NX08_RS04300 PF05221 S-adenosyl-L-homocysteine hydrolase NX08_RS04310 PF00311 Phosphoenolpyruvate carboxylase NX08_RS04335 PF00328 Histidine phosphatase superfamily (branch 2) NX08_RS04340 PF02772 S-adenosylmethionine synthetase, central domain NX08_RS04340 PF02773 S-adenosylmethionine synthetase, C-terminal domain NX08_RS04340 PF00438 S-adenosylmethionine synthetase, N-terminal domain NX08_RS04350 PF13649 Methyltransferase domain NX08_RS04355 PF01207 Dihydrouridine synthase (Dus) NX08_RS04365 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NX08_RS04365 PF00294 pfkB family carbohydrate kinase NX08_RS04370 PF07662 Na+ dependent nucleoside transporter C-terminus NX08_RS04370 PF01773 Na+ dependent nucleoside transporter N-terminus NX08_RS04370 PF07670 Nucleoside recognition NX08_RS04375 PF00248 Aldo/keto reductase family NX08_RS04390 PF00593 TonB dependent receptor NX08_RS04390 PF07715 TonB-dependent Receptor Plug Domain NX08_RS04410 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS04415 PF00005 ABC transporter NX08_RS04425 PF02668 Taurine catabolism dioxygenase TauD, TfdA family NX08_RS04435 PF00005 ABC transporter NX08_RS04440 PF13472 GDSL-like Lipase/Acylhydrolase family NX08_RS04445 PF00072 Response regulator receiver domain NX08_RS04445 PF00486 Transcriptional regulatory protein, C terminal NX08_RS04465 PF01219 Prokaryotic diacylglycerol kinase NX08_RS04485 PF01790 Prolipoprotein diacylglyceryl transferase NX08_RS04490 PF00303 Thymidylate synthase NX08_RS04495 PF00186 Dihydrofolate reductase NX08_RS04500 PF00149 Calcineurin-like phosphoesterase NX08_RS04505 PF04379 ApaG domain NX08_RS04510 PF00398 Ribosomal RNA adenine dimethylase NX08_RS04520 PF04166 Pyridoxal phosphate biosynthetic protein PdxA NX08_RS04525 PF00639 PPIC-type PPIASE domain NX08_RS04525 PF09312 SurA N-terminal domain NX08_RS04530 PF03968 OstA-like protein NX08_RS04530 PF04453 LPS transport system D NX08_RS04535 PF00850 Histone deacetylase domain NX08_RS04540 PF01923 Cobalamin adenosyltransferase NX08_RS04555 PF01494 FAD binding domain NX08_RS04560 PF01494 FAD binding domain NX08_RS04585 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit NX08_RS04585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase NX08_RS04590 PF03466 LysR substrate binding domain NX08_RS04590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS04600 PF13193 AMP-binding enzyme C-terminal domain NX08_RS04600 PF00501 AMP-binding enzyme NX08_RS04610 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS04630 PF08450 SMP-30/Gluconolactonase/LRE-like region NX08_RS04635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold NX08_RS04635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain NX08_RS04640 PF18125 RlmM ferredoxin-like domain NX08_RS04640 PF01728 FtsJ-like methyltransferase NX08_RS04655 PF00892 EamA-like transporter family NX08_RS04665 PF00749 tRNA synthetases class I (E and Q), catalytic domain NX08_RS04665 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain NX08_RS04680 PF00072 Response regulator receiver domain NX08_RS04680 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS04685 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_RS04685 PF00072 Response regulator receiver domain NX08_RS04685 PF00672 HAMP domain NX08_RS04685 PF01627 Hpt domain NX08_RS04685 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS04685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS04690 PF00072 Response regulator receiver domain NX08_RS04690 PF00196 Bacterial regulatory proteins, luxR family NX08_RS04700 PF01625 Peptide methionine sulfoxide reductase NX08_RS04710 PF00923 Transaldolase/Fructose-6-phosphate aldolase NX08_RS04715 PF01272 Transcription elongation factor, GreA/GreB, C-term NX08_RS04715 PF14760 Rnk N-terminus NX08_RS04720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS04720 PF03466 LysR substrate binding domain NX08_RS04725 PF13192 Thioredoxin domain NX08_RS04725 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS04730 PF00578 AhpC/TSA family NX08_RS04730 PF10417 C-terminal domain of 1-Cys peroxiredoxin NX08_RS04735 PF17827 PrmC N-terminal domain NX08_RS04735 PF05175 Methyltransferase small domain NX08_RS04765 PF00561 alpha/beta hydrolase fold NX08_RS04775 PF00293 NUDIX domain NX08_RS04780 PF01612 3'-5' exonuclease NX08_RS04780 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NX08_RS04780 PF00476 DNA polymerase family A NX08_RS04780 PF01367 5'-3' exonuclease, C-terminal SAM fold NX08_RS04800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain NX08_RS04800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain NX08_RS04825 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch NX08_RS04845 PF01063 Amino-transferase class IV NX08_RS04850 PF04151 Bacterial pre-peptidase C-terminal domain NX08_RS04850 PF00082 Subtilase family NX08_RS04855 PF00082 Subtilase family NX08_RS04855 PF04151 Bacterial pre-peptidase C-terminal domain NX08_RS04860 PF00082 Subtilase family NX08_RS04860 PF04151 Bacterial pre-peptidase C-terminal domain NX08_RS04865 PF04073 Aminoacyl-tRNA editing domain NX08_RS04885 PF03358 NADPH-dependent FMN reductase NX08_RS04890 PF03631 Virulence factor BrkB NX08_RS04895 PF08534 Redoxin NX08_RS04900 PF00708 Acylphosphatase NX08_RS04910 PF03976 Polyphosphate kinase 2 (PPK2) NX08_RS04915 PF00994 Probable molybdopterin binding domain NX08_RS04925 PF00472 RF-1 domain NX08_RS04925 PF03462 PCRF domain NX08_RS04930 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain NX08_RS04930 PF01488 Shikimate / quinate 5-dehydrogenase NX08_RS04930 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain NX08_RS04940 PF03550 Outer membrane lipoprotein LolB NX08_RS04945 PF00288 GHMP kinases N terminal domain NX08_RS04945 PF08544 GHMP kinases C terminal NX08_RS04955 PF14572 Phosphoribosyl synthetase-associated domain NX08_RS04955 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase NX08_RS04960 PF14693 Ribosomal protein TL5, C-terminal domain NX08_RS04960 PF01386 Ribosomal L25p family NX08_RS04965 PF01195 Peptidyl-tRNA hydrolase NX08_RS04970 PF01926 50S ribosome-binding GTPase NX08_RS04970 PF06071 Protein of unknown function (DUF933) NX08_RS04990 PF00009 Elongation factor Tu GTP binding domain NX08_RS04990 PF03143 Elongation factor Tu C-terminal domain NX08_RS04990 PF03144 Elongation factor Tu domain 2 NX08_RS05000 PF00584 SecE/Sec61-gamma subunits of protein translocation complex NX08_RS05005 PF00467 KOW motif NX08_RS05005 PF02357 Transcription termination factor nusG NX08_RS05010 PF03946 Ribosomal protein L11, N-terminal domain NX08_RS05010 PF00298 Ribosomal protein L11, RNA binding domain NX08_RS05015 PF00687 Ribosomal protein L1p/L10e family NX08_RS05020 PF00466 Ribosomal protein L10 NX08_RS05025 PF00542 Ribosomal protein L7/L12 C-terminal domain NX08_RS05025 PF16320 Ribosomal protein L7/L12 dimerisation domain NX08_RS05030 PF00562 RNA polymerase Rpb2, domain 6 NX08_RS05030 PF10385 RNA polymerase beta subunit external 1 domain NX08_RS05030 PF04561 RNA polymerase Rpb2, domain 2 NX08_RS05030 PF04560 RNA polymerase Rpb2, domain 7 NX08_RS05030 PF04565 RNA polymerase Rpb2, domain 3 NX08_RS05030 PF04563 RNA polymerase beta subunit NX08_RS05035 PF05000 RNA polymerase Rpb1, domain 4 NX08_RS05035 PF04997 RNA polymerase Rpb1, domain 1 NX08_RS05035 PF04983 RNA polymerase Rpb1, domain 3 NX08_RS05035 PF04998 RNA polymerase Rpb1, domain 5 NX08_RS05035 PF00623 RNA polymerase Rpb1, domain 2 NX08_RS05040 PF00164 Ribosomal protein S12/S23 NX08_RS05045 PF00177 Ribosomal protein S7p/S5e NX08_RS05050 PF00009 Elongation factor Tu GTP binding domain NX08_RS05050 PF03764 Elongation factor G, domain IV NX08_RS05050 PF14492 Elongation Factor G, domain II NX08_RS05050 PF00679 Elongation factor G C-terminus NX08_RS05050 PF03144 Elongation factor Tu domain 2 NX08_RS05055 PF00009 Elongation factor Tu GTP binding domain NX08_RS05055 PF03143 Elongation factor Tu C-terminal domain NX08_RS05055 PF03144 Elongation factor Tu domain 2 NX08_RS05070 PF00338 Ribosomal protein S10p/S20e NX08_RS05075 PF00297 Ribosomal protein L3 NX08_RS05080 PF00573 Ribosomal protein L4/L1 family NX08_RS05085 PF00276 Ribosomal protein L23 NX08_RS05090 PF03947 Ribosomal Proteins L2, C-terminal domain NX08_RS05090 PF00181 Ribosomal Proteins L2, RNA binding domain NX08_RS05095 PF00203 Ribosomal protein S19 NX08_RS05100 PF00237 Ribosomal protein L22p/L17e NX08_RS05105 PF00189 Ribosomal protein S3, C-terminal domain NX08_RS05105 PF07650 KH domain NX08_RS05110 PF00252 Ribosomal protein L16p/L10e NX08_RS05115 PF00831 Ribosomal L29 protein NX08_RS05120 PF00366 Ribosomal protein S17 NX08_RS05125 PF00238 Ribosomal protein L14p/L23e NX08_RS05130 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 NX08_RS05130 PF00467 KOW motif NX08_RS05135 PF00281 Ribosomal protein L5 NX08_RS05135 PF00673 ribosomal L5P family C-terminus NX08_RS05140 PF00253 Ribosomal protein S14p/S29e NX08_RS05145 PF00410 Ribosomal protein S8 NX08_RS05150 PF00347 Ribosomal protein L6 NX08_RS05155 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast NX08_RS05160 PF03719 Ribosomal protein S5, C-terminal domain NX08_RS05160 PF00333 Ribosomal protein S5, N-terminal domain NX08_RS05165 PF00327 Ribosomal protein L30p/L7e NX08_RS05170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A NX08_RS05175 PF00344 SecY translocase NX08_RS05180 PF00416 Ribosomal protein S13/S18 NX08_RS05185 PF00411 Ribosomal protein S11 NX08_RS05190 PF01479 S4 domain NX08_RS05190 PF00163 Ribosomal protein S4/S9 N-terminal domain NX08_RS05195 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain NX08_RS05195 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain NX08_RS05195 PF01000 RNA polymerase Rpb3/RpoA insert domain NX08_RS05200 PF01196 Ribosomal protein L17 NX08_RS05205 PF02600 Disulfide bond formation protein DsbB NX08_RS05220 PF01474 Class-II DAHP synthetase family NX08_RS05235 PF01425 Amidase NX08_RS05245 PF00009 Elongation factor Tu GTP binding domain NX08_RS05245 PF00679 Elongation factor G C-terminus NX08_RS05245 PF03144 Elongation factor Tu domain 2 NX08_RS05250 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NX08_RS05255 PF00056 lactate/malate dehydrogenase, NAD binding domain NX08_RS05255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain NX08_RS05260 PF00043 Glutathione S-transferase, C-terminal domain NX08_RS05260 PF02798 Glutathione S-transferase, N-terminal domain NX08_RS05280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NX08_RS05280 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS05285 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS05285 PF00107 Zinc-binding dehydrogenase NX08_RS05290 PF00691 OmpA family NX08_RS05290 PF00223 Photosystem I psaA/psaB protein NX08_RS05300 PF00849 RNA pseudouridylate synthase NX08_RS05310 PF00155 Aminotransferase class I and II NX08_RS05320 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS05325 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS05330 PF12857 TOBE-like domain NX08_RS05330 PF17850 CysA C-terminal regulatory domain NX08_RS05330 PF00005 ABC transporter NX08_RS05340 PF00107 Zinc-binding dehydrogenase NX08_RS05340 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS05350 PF04185 Phosphoesterase family NX08_RS05350 PF05506 Domain of unknown function (DUF756) NX08_RS05360 PF00300 Histidine phosphatase superfamily (branch 1) NX08_RS05370 PF02875 Mur ligase family, glutamate ligase domain NX08_RS05370 PF08245 Mur ligase middle domain NX08_RS05385 PF00156 Phosphoribosyl transferase domain NX08_RS05390 PF04305 Protein of unknown function (DUF455) NX08_RS05405 PF00149 Calcineurin-like phosphoesterase NX08_RS05410 PF01569 PAP2 superfamily NX08_RS05415 PF00534 Glycosyl transferases group 1 NX08_RS05415 PF13439 Glycosyltransferase Family 4 NX08_RS05420 PF02541 Ppx/GppA phosphatase family NX08_RS05425 PF13089 Polyphosphate kinase N-terminal domain NX08_RS05425 PF17941 Polyphosphate kinase C-terminal domain 1 NX08_RS05425 PF13090 Polyphosphate kinase C-terminal domain 2 NX08_RS05425 PF02503 Polyphosphate kinase middle domain NX08_RS05430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS05430 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS05430 PF00989 PAS fold NX08_RS05430 PF11808 Phosphate regulon sensor protein PhoR NX08_RS05435 PF00072 Response regulator receiver domain NX08_RS05435 PF00486 Transcriptional regulatory protein, C terminal NX08_RS05440 PF01435 Peptidase family M48 NX08_RS05440 PF13181 Tetratricopeptide repeat NX08_RS05445 PF00462 Glutaredoxin NX08_RS05460 PF00180 Isocitrate/isopropylmalate dehydrogenase NX08_RS05460 PF18324 Hypothetical protein TT1725 NX08_RS05495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS05495 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS05505 PF05698 Bacterial trigger factor protein (TF) C-terminus NX08_RS05505 PF05697 Bacterial trigger factor protein (TF) NX08_RS05510 PF00574 Clp protease NX08_RS05515 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_RS05515 PF06689 ClpX C4-type zinc finger NX08_RS05515 PF07724 AAA domain (Cdc48 subfamily) NX08_RS05520 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS05520 PF02190 ATP-dependent protease La (LON) substrate-binding domain NX08_RS05520 PF05362 Lon protease (S16) C-terminal proteolytic domain NX08_RS05525 PF00216 Bacterial DNA-binding protein NX08_RS05550 PF01476 LysM domain NX08_RS05550 PF05257 CHAP domain NX08_RS05555 PF16123 Hydroxyacylglutathione hydrolase C-terminus NX08_RS05555 PF00753 Metallo-beta-lactamase superfamily NX08_RS05565 PF00075 RNase H NX08_RS05570 PF00929 Exonuclease NX08_RS05595 PF01075 Glycosyltransferase family 9 (heptosyltransferase) NX08_RS05605 PF00753 Metallo-beta-lactamase superfamily NX08_RS05605 PF12706 Beta-lactamase superfamily domain NX08_RS05610 PF06463 Molybdenum Cofactor Synthesis C NX08_RS05610 PF04055 Radical SAM superfamily NX08_RS05620 PF01967 MoaC family NX08_RS05625 PF02597 ThiS family NX08_RS05630 PF02391 MoaE protein NX08_RS05645 PF12170 DNA polymerase III tau subunit V interacting with alpha NX08_RS05645 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding NX08_RS05645 PF12169 DNA polymerase III subunits gamma and tau domain III NX08_RS05650 PF02575 YbaB/EbfC DNA-binding family NX08_RS05655 PF13662 Toprim domain NX08_RS05655 PF02132 RecR protein NX08_RS05660 PF01230 HIT domain NX08_RS05670 PF11992 Domain of unknown function (DUF3488) NX08_RS05670 PF13559 Domain of unknown function (DUF4129) NX08_RS05670 PF01841 Transglutaminase-like superfamily NX08_RS05680 PF17863 AAA lid domain NX08_RS05680 PF07726 ATPase family associated with various cellular activities (AAA) NX08_RS05700 PF02545 Maf-like protein NX08_RS05705 PF02620 Large ribosomal RNA subunit accumulation protein YceD NX08_RS05710 PF01783 Ribosomal L32p protein family NX08_RS05715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_RS05715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_RS05725 PF00698 Acyl transferase domain NX08_RS05735 PF00550 Phosphopantetheine attachment site NX08_RS05740 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS05740 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS05745 PF04715 Anthranilate synthase component I, N terminal region NX08_RS05745 PF00425 chorismate binding enzyme NX08_RS05750 PF02618 YceG-like family NX08_RS05755 PF09115 DNA polymerase III, delta subunit, C terminal NX08_RS05770 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system NX08_RS05785 PF00158 Sigma-54 interaction domain NX08_RS05785 PF06506 Propionate catabolism activator NX08_RS05785 PF02954 Bacterial regulatory protein, Fis family NX08_RS05800 PF00285 Citrate synthase, C-terminal domain NX08_RS05805 PF00330 Aconitase family (aconitate hydratase) NX08_RS05805 PF00694 Aconitase C-terminal domain NX08_RS05815 PF04303 PrpF protein NX08_RS05825 PF07715 TonB-dependent Receptor Plug Domain NX08_RS05825 PF00593 TonB dependent receptor NX08_RS05840 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain NX08_RS05840 PF17962 Bacterial macroglobulin domain 6 NX08_RS05840 PF07703 Alpha-2-macroglobulin bait region domain NX08_RS05840 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain NX08_RS05840 PF11974 Bacterial alpha-2-macroglobulin MG3 domain NX08_RS05840 PF01835 MG2 domain NX08_RS05840 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain NX08_RS05840 PF00207 Alpha-2-macroglobulin family NX08_RS05860 PF00905 Penicillin binding protein transpeptidase domain NX08_RS05860 PF00912 Transglycosylase NX08_RS05860 PF06832 Penicillin-Binding Protein C-terminus Family NX08_RS05870 PF08534 Redoxin NX08_RS05880 PF00226 DnaJ domain NX08_RS05880 PF01556 DnaJ C terminal domain NX08_RS05885 PF00072 Response regulator receiver domain NX08_RS05890 PF12221 Bacterial membrane protein N terminal NX08_RS05890 PF01145 SPFH domain / Band 7 family NX08_RS05895 PF01145 SPFH domain / Band 7 family NX08_RS05900 PF00709 Adenylosuccinate synthetase NX08_RS05905 PF11838 ERAP1-like C-terminal domain NX08_RS05905 PF01433 Peptidase family M1 domain NX08_RS05925 PF00440 Bacterial regulatory proteins, tetR family NX08_RS05930 PF00271 Helicase conserved C-terminal domain NX08_RS05930 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) NX08_RS05930 PF08463 EcoEI R protein C-terminal NX08_RS05930 PF04851 Type III restriction enzyme, res subunit NX08_RS05945 PF02384 N-6 DNA Methylase NX08_RS05945 PF12161 HsdM N-terminal domain NX08_RS05950 PF01420 Type I restriction modification DNA specificity domain NX08_RS05970 PF00300 Histidine phosphatase superfamily (branch 1) NX08_RS05970 PF13456 Reverse transcriptase-like NX08_RS05975 PF01256 Carbohydrate kinase NX08_RS05985 PF00723 Glycosyl hydrolases family 15 NX08_RS06010 PF05598 Transposase domain (DUF772) NX08_RS06010 PF01609 Transposase DDE domain NX08_RS06020 PF07971 Glycosyl hydrolase family 92 NX08_RS06020 PF17678 Glycosyl hydrolase family 92 N-terminal domain NX08_RS06025 PF00106 short chain dehydrogenase NX08_RS06045 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS06065 PF17755 UvrA DNA-binding domain NX08_RS06095 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NX08_RS06095 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NX08_RS06100 PF03450 CO dehydrogenase flavoprotein C-terminal domain NX08_RS06100 PF00941 FAD binding domain in molybdopterin dehydrogenase NX08_RS06105 PF01799 [2Fe-2S] binding domain NX08_RS06105 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_RS06140 PF01726 LexA DNA binding domain NX08_RS06140 PF00717 Peptidase S24-like NX08_RS06155 PF14579 Helix-hairpin-helix motif NX08_RS06155 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NX08_RS06155 PF07733 Bacterial DNA polymerase III alpha NTPase domain NX08_RS06155 PF02811 PHP domain NX08_RS06220 PF12833 Helix-turn-helix domain NX08_RS06220 PF02311 AraC-like ligand binding domain NX08_RS06295 PF00199 Catalase NX08_RS06295 PF06628 Catalase-related immune-responsive NX08_RS06295 PF18011 C-terminal domain found in long catalases NX08_RS06300 PF00248 Aldo/keto reductase family NX08_RS06310 PF02347 Glycine cleavage system P-protein NX08_RS06330 PF00005 ABC transporter NX08_RS06330 PF03412 Peptidase C39 family NX08_RS06330 PF00664 ABC transporter transmembrane region NX08_RS06335 PF07690 Major Facilitator Superfamily NX08_RS06355 PF01694 Rhomboid family NX08_RS06355 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease NX08_RS06365 PF08019 Phosphoethanolamine transferase EptA/EptB NX08_RS06365 PF00884 Sulfatase NX08_RS06380 PF00486 Transcriptional regulatory protein, C terminal NX08_RS06380 PF00072 Response regulator receiver domain NX08_RS06385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06385 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS06385 PF08521 Two-component sensor kinase N-terminal NX08_RS06395 PF03776 Septum formation topological specificity factor MinE NX08_RS06400 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain NX08_RS06405 PF03775 Septum formation inhibitor MinC, C-terminal domain NX08_RS06405 PF05209 Septum formation inhibitor MinC, N-terminal domain NX08_RS06415 PF07730 Histidine kinase NX08_RS06420 PF00196 Bacterial regulatory proteins, luxR family NX08_RS06420 PF00072 Response regulator receiver domain NX08_RS06435 PF00730 HhH-GPD superfamily base excision DNA repair protein NX08_RS06465 PF02222 ATP-grasp domain NX08_RS06480 PF04377 Arginine-tRNA-protein transferase, C terminus NX08_RS06480 PF04376 Arginine-tRNA-protein transferase, N terminus NX08_RS06515 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS06530 PF17760 UvrA interaction domain NX08_RS06530 PF17755 UvrA DNA-binding domain NX08_RS06530 PF00005 ABC transporter NX08_RS06535 PF00829 Ribosomal prokaryotic L21 protein NX08_RS06540 PF01016 Ribosomal L27 protein NX08_RS06545 PF01926 50S ribosome-binding GTPase NX08_RS06545 PF01018 GTP1/OBG NX08_RS06550 PF01649 Ribosomal protein S20 NX08_RS06555 PF03023 Lipid II flippase MurJ NX08_RS06560 PF01687 Riboflavin kinase NX08_RS06560 PF06574 FAD synthetase NX08_RS06565 PF08264 Anticodon-binding domain of tRNA NX08_RS06565 PF06827 Zinc finger found in FPG and IleRS NX08_RS06565 PF00133 tRNA synthetases class I (I, L, M and V) NX08_RS06570 PF01252 Signal peptidase (SPase) II NX08_RS06575 PF02401 LytB protein NX08_RS06585 PF06481 COX Aromatic Rich Motif NX08_RS06585 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NX08_RS06590 PF00115 Cytochrome C and Quinol oxidase polypeptide I NX08_RS06595 PF00510 Cytochrome c oxidase subunit III NX08_RS06600 PF03626 Prokaryotic Cytochrome C oxidase subunit IV NX08_RS06615 PF18073 Rubredoxin metal binding domain NX08_RS06620 PF05656 Protein of unknown function (DUF805) NX08_RS06635 PF12833 Helix-turn-helix domain NX08_RS06640 PF00183 Hsp90 protein NX08_RS06640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06650 PF08678 Rsbr N terminal NX08_RS06650 PF01740 STAS domain NX08_RS06655 PF01740 STAS domain NX08_RS06660 PF13581 Histidine kinase-like ATPase domain NX08_RS06670 PF00672 HAMP domain NX08_RS06670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06670 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS06670 PF01627 Hpt domain NX08_RS06670 PF00072 Response regulator receiver domain NX08_RS06670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_RS06675 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS06675 PF08448 PAS fold NX08_RS06675 PF13188 PAS domain NX08_RS06675 PF00072 Response regulator receiver domain NX08_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06690 PF00085 Thioredoxin NX08_RS06695 PF07237 Protein of unknown function (DUF1428) NX08_RS06700 PF13493 Domain of unknown function (DUF4118) NX08_RS06700 PF13492 GAF domain NX08_RS06700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06700 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS06700 PF02702 Osmosensitive K+ channel His kinase sensor domain NX08_RS06705 PF01339 CheB methylesterase NX08_RS06710 PF01739 CheR methyltransferase, SAM binding domain NX08_RS06710 PF03705 CheR methyltransferase, all-alpha domain NX08_RS06715 PF00672 HAMP domain NX08_RS06715 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS06715 PF01627 Hpt domain NX08_RS06715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_RS06715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06715 PF00072 Response regulator receiver domain NX08_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS06720 PF13426 PAS domain NX08_RS06720 PF00072 Response regulator receiver domain NX08_RS06725 PF00072 Response regulator receiver domain NX08_RS06730 PF06964 Alpha-L-arabinofuranosidase C-terminal domain NX08_RS06735 PF01263 Aldose 1-epimerase NX08_RS06740 PF01578 Cytochrome C assembly protein NX08_RS06745 PF02978 Signal peptide binding domain NX08_RS06745 PF02881 SRP54-type protein, helical bundle domain NX08_RS06745 PF00448 SRP54-type protein, GTPase domain NX08_RS06755 PF03060 Nitronate monooxygenase NX08_RS06760 PF01063 Amino-transferase class IV NX08_RS06765 PF00886 Ribosomal protein S16 NX08_RS06770 PF05239 PRC-barrel domain NX08_RS06770 PF01782 RimM N-terminal domain NX08_RS06775 PF01746 tRNA (Guanine-1)-methyltransferase NX08_RS06780 PF01245 Ribosomal protein L19 NX08_RS06785 PF01554 MatE NX08_RS06790 PF01479 S4 domain NX08_RS06795 PF00141 Peroxidase NX08_RS06805 PF01624 MutS domain I NX08_RS06805 PF05192 MutS domain III NX08_RS06805 PF05190 MutS family domain IV NX08_RS06805 PF00488 MutS domain V NX08_RS06805 PF05188 MutS domain II NX08_RS06840 PF00488 MutS domain V NX08_RS06840 PF05190 MutS family domain IV NX08_RS06840 PF05192 MutS domain III NX08_RS06840 PF05188 MutS domain II NX08_RS06840 PF01624 MutS domain I NX08_RS06855 PF02837 Glycosyl hydrolases family 2, sugar binding domain NX08_RS06855 PF02836 Glycosyl hydrolases family 2, TIM barrel domain NX08_RS06855 PF00703 Glycosyl hydrolases family 2 NX08_RS06855 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 NX08_RS06855 PF16355 Domain of unknown function (DUF4982) NX08_RS06860 PF07745 Glycosyl hydrolase family 53 NX08_RS06870 PF01381 Helix-turn-helix NX08_RS06870 PF06114 IrrE N-terminal-like domain NX08_RS06870 PF09856 Predicted transcriptional regulator (DUF2083) NX08_RS06875 PF00171 Aldehyde dehydrogenase family NX08_RS06880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS06880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS06880 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS06890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NX08_RS06890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NX08_RS06890 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS06895 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase NX08_RS06895 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NX08_RS06905 PF01545 Cation efflux family NX08_RS06910 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NX08_RS06910 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NX08_RS06910 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS06915 PF08281 Sigma-70, region 4 NX08_RS06915 PF04542 Sigma-70 region 2 NX08_RS06925 PF13180 PDZ domain NX08_RS06930 PF00679 Elongation factor G C-terminus NX08_RS06930 PF06421 GTP-binding protein LepA C-terminus NX08_RS06930 PF00009 Elongation factor Tu GTP binding domain NX08_RS06930 PF03144 Elongation factor Tu domain 2 NX08_RS06935 PF10502 Signal peptidase, peptidase S26 NX08_RS06945 PF00035 Double-stranded RNA binding motif NX08_RS06945 PF14622 Ribonuclease-III-like NX08_RS06950 PF01926 50S ribosome-binding GTPase NX08_RS06950 PF07650 KH domain NX08_RS06955 PF11967 Recombination protein O N terminal NX08_RS06955 PF02565 Recombination protein O C terminal NX08_RS06965 PF05958 tRNA (Uracil-5-)-methyltransferase NX08_RS06970 PF01928 CYTH domain NX08_RS06975 PF01323 DSBA-like thioredoxin domain NX08_RS06980 PF01593 Flavin containing amine oxidoreductase NX08_RS06985 PF04244 Deoxyribodipyrimidine photo-lyase-related protein NX08_RS06990 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_RS06995 PF00156 Phosphoribosyl transferase domain NX08_RS07000 PF01048 Phosphorylase superfamily NX08_RS07005 PF00313 'Cold-shock' DNA-binding domain NX08_RS07010 PF01494 FAD binding domain NX08_RS07025 PF08494 DEAD/H associated NX08_RS07025 PF00271 Helicase conserved C-terminal domain NX08_RS07025 PF00270 DEAD/DEAH box helicase NX08_RS07030 PF04675 DNA ligase N terminus NX08_RS07030 PF04679 ATP dependent DNA ligase C terminal region NX08_RS07030 PF01068 ATP dependent DNA ligase domain NX08_RS07040 PF01068 ATP dependent DNA ligase domain NX08_RS07040 PF04679 ATP dependent DNA ligase C terminal region NX08_RS07040 PF04675 DNA ligase N terminus NX08_RS07055 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS07055 PF00563 EAL domain NX08_RS07075 PF02803 Thiolase, C-terminal domain NX08_RS07075 PF00108 Thiolase, N-terminal domain NX08_RS07080 PF03797 Autotransporter beta-domain NX08_RS07080 PF12951 Passenger-associated-transport-repeat NX08_RS07080 PF00082 Subtilase family NX08_RS07085 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain NX08_RS07085 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase NX08_RS07095 PF01863 Protein of unknown function DUF45 NX08_RS07105 PF07043 Protein of unknown function (DUF1328) NX08_RS07115 PF01258 Prokaryotic dksA/traR C4-type zinc finger NX08_RS07150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_RS07165 PF03831 PhnA domain NX08_RS07165 PF08274 PhnA Zinc-Ribbon NX08_RS07180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family NX08_RS07185 PF07690 Major Facilitator Superfamily NX08_RS07220 PF09924 Uncharacterised conserved protein (DUF2156) NX08_RS07220 PF03706 Lysylphosphatidylglycerol synthase TM region NX08_RS07230 PF01042 Endoribonuclease L-PSP NX08_RS07275 PF04545 Sigma-70, region 4 NX08_RS07275 PF04542 Sigma-70 region 2 NX08_RS07290 PF04060 Putative Fe-S cluster NX08_RS07300 PF09334 tRNA synthetases class I (M) NX08_RS07300 PF01588 Putative tRNA binding domain NX08_RS07310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_RS07315 PF00324 Amino acid permease NX08_RS07320 PF02574 Homocysteine S-methyltransferase NX08_RS07330 PF02592 Putative vitamin uptake transporter NX08_RS07370 PF03653 Uncharacterised protein family (UPF0093) NX08_RS07375 PF10947 Protein of unknown function (DUF2628) NX08_RS07385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit NX08_RS07390 PF07733 Bacterial DNA polymerase III alpha NTPase domain NX08_RS07390 PF17657 Bacterial DNA polymerase III alpha subunit finger domain NX08_RS07390 PF14579 Helix-hairpin-helix motif NX08_RS07390 PF02811 PHP domain NX08_RS07390 PF01336 OB-fold nucleic acid binding domain NX08_RS07400 PF01351 Ribonuclease HII NX08_RS07405 PF02684 Lipid-A-disaccharide synthetase NX08_RS07410 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 NX08_RS07410 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS07415 PF07977 FabA-like domain NX08_RS07420 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD NX08_RS07420 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS07430 PF01103 Surface antigen NX08_RS07430 PF07244 Surface antigen variable number repeat NX08_RS07435 PF02163 Peptidase family M50 NX08_RS07435 PF17820 PDZ domain NX08_RS07440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase NX08_RS07440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain NX08_RS07440 PF13288 DXP reductoisomerase C-terminal domain NX08_RS07450 PF01255 Putative undecaprenyl diphosphate synthase NX08_RS07455 PF01765 Ribosome recycling factor NX08_RS07460 PF00696 Amino acid kinase family NX08_RS07465 PF00072 Response regulator receiver domain NX08_RS07465 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS07470 PF00889 Elongation factor TS NX08_RS07475 PF00318 Ribosomal protein S2 NX08_RS07510 PF00557 Metallopeptidase family M24 NX08_RS07515 PF01909 Nucleotidyltransferase domain NX08_RS07515 PF01966 HD domain NX08_RS07515 PF08335 GlnD PII-uridylyltransferase NX08_RS07520 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal NX08_RS07520 PF14602 Hexapeptide repeat of succinyl-transferase NX08_RS07520 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS07530 PF03960 ArsC family NX08_RS07540 PF07687 Peptidase dimerisation domain NX08_RS07540 PF01546 Peptidase family M20/M25/M40 NX08_RS07545 PF00733 Asparagine synthase NX08_RS07545 PF13537 Glutamine amidotransferase domain NX08_RS07555 PF00593 TonB dependent receptor NX08_RS07555 PF07715 TonB-dependent Receptor Plug Domain NX08_RS07560 PF01804 Penicillin amidase NX08_RS07565 PF00210 Ferritin-like domain NX08_RS07575 PF05724 Thiopurine S-methyltransferase (TPMT) NX08_RS07585 PF00521 DNA gyrase/topoisomerase IV, subunit A NX08_RS07585 PF03989 DNA gyrase C-terminal domain, beta-propeller NX08_RS07600 PF02321 Outer membrane efflux protein NX08_RS07605 PF00529 HlyD membrane-fusion protein of T1SS NX08_RS07605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS07610 PF07690 Major Facilitator Superfamily NX08_RS07620 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_RS07620 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_RS07620 PF14310 Fibronectin type III-like domain NX08_RS07630 PF00854 POT family NX08_RS07685 PF01432 Peptidase family M3 NX08_RS07695 PF00255 Glutathione peroxidase NX08_RS07700 PF00175 Oxidoreductase NAD-binding domain NX08_RS07700 PF00970 Oxidoreductase FAD-binding domain NX08_RS07705 PF00005 ABC transporter NX08_RS07710 PF05683 Fumarase C-terminus NX08_RS07710 PF05681 Fumarate hydratase (Fumerase) NX08_RS07725 PF02253 Phospholipase A1 NX08_RS07735 PF00313 'Cold-shock' DNA-binding domain NX08_RS07750 PF00899 ThiF family NX08_RS07755 PF01026 TatD related DNase NX08_RS07775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS07775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS07775 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS07785 PF00043 Glutathione S-transferase, C-terminal domain NX08_RS07785 PF02798 Glutathione S-transferase, N-terminal domain NX08_RS07795 PF13537 Glutamine amidotransferase domain NX08_RS07795 PF00733 Asparagine synthase NX08_RS07800 PF03358 NADPH-dependent FMN reductase NX08_RS07805 PF03796 DnaB-like helicase C terminal domain NX08_RS07805 PF00772 DnaB-like helicase N terminal domain NX08_RS07810 PF03441 FAD binding domain of DNA photolyase NX08_RS07810 PF00875 DNA photolyase NX08_RS07815 PF05736 OprF membrane domain NX08_RS07815 PF00691 OmpA family NX08_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS07820 PF03466 LysR substrate binding domain NX08_RS07835 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS07840 PF00873 AcrB/AcrD/AcrF family NX08_RS07845 PF00106 short chain dehydrogenase NX08_RS07850 PF02321 Outer membrane efflux protein NX08_RS07855 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS07865 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS07930 PF00589 Phage integrase family NX08_RS07930 PF13356 Arm DNA-binding domain NX08_RS07940 PF00082 Subtilase family NX08_RS07945 PF01668 SmpB protein NX08_RS07955 PF03658 RnfH family Ubiquitin NX08_RS07965 PF04355 SmpA / OmlA family NX08_RS07970 PF01475 Ferric uptake regulator family NX08_RS07975 PF02463 RecF/RecN/SMC N terminal domain NX08_RS07980 PF01628 HrcA protein C terminal domain NX08_RS07980 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding NX08_RS07985 PF01025 GrpE NX08_RS07990 PF00012 Hsp70 protein NX08_RS07995 PF00684 DnaJ central domain NX08_RS07995 PF01556 DnaJ C terminal domain NX08_RS07995 PF00226 DnaJ domain NX08_RS08000 PF08543 Phosphomethylpyrimidine kinase NX08_RS08025 PF00005 ABC transporter NX08_RS08025 PF03412 Peptidase C39 family NX08_RS08025 PF00664 ABC transporter transmembrane region NX08_RS08030 PF03466 LysR substrate binding domain NX08_RS08030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS08040 PF00005 ABC transporter NX08_RS08040 PF00664 ABC transporter transmembrane region NX08_RS08045 PF01205 Uncharacterized protein family UPF0029 NX08_RS08050 PF03641 Possible lysine decarboxylase NX08_RS08055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NX08_RS08055 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS08060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NX08_RS08060 PF00364 Biotin-requiring enzyme NX08_RS08060 PF02817 e3 binding domain NX08_RS08065 PF16870 2-oxoglutarate dehydrogenase C-terminal NX08_RS08065 PF16078 2-oxoglutarate dehydrogenase N-terminus NX08_RS08065 PF00676 Dehydrogenase E1 component NX08_RS08065 PF02779 Transketolase, pyrimidine binding domain NX08_RS08075 PF08007 Cupin superfamily protein NX08_RS08105 PF08328 Adenylosuccinate lyase C-terminal NX08_RS08105 PF00206 Lyase NX08_RS08115 PF01595 Cyclin M transmembrane N-terminal domain NX08_RS08115 PF00571 CBS domain NX08_RS08115 PF03471 Transporter associated domain NX08_RS08120 PF10415 Fumarase C C-terminus NX08_RS08120 PF00206 Lyase NX08_RS08145 PF00005 ABC transporter NX08_RS08150 PF00392 Bacterial regulatory proteins, gntR family NX08_RS08160 PF00255 Glutathione peroxidase NX08_RS08165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_RS08165 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NX08_RS08170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NX08_RS08170 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NX08_RS08170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NX08_RS08175 PF04102 SlyX NX08_RS08190 PF00356 Bacterial regulatory proteins, lacI family NX08_RS08195 PF07690 Major Facilitator Superfamily NX08_RS08200 PF00294 pfkB family carbohydrate kinase NX08_RS08215 PF02574 Homocysteine S-methyltransferase NX08_RS08215 PF00809 Pterin binding enzyme NX08_RS08220 PF01209 ubiE/COQ5 methyltransferase family NX08_RS08225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS08225 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS08225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS08230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS08230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS08230 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS08250 PF08206 Ribonuclease B OB domain NX08_RS08250 PF00773 RNB domain NX08_RS08250 PF00575 S1 RNA binding domain NX08_RS08250 PF17876 Cold shock domain NX08_RS08250 PF08461 Ribonuclease R winged-helix domain NX08_RS08260 PF08032 RNA 2'-O ribose methyltransferase substrate binding NX08_RS08260 PF00588 SpoU rRNA Methylase family NX08_RS08280 PF00929 Exonuclease NX08_RS08290 PF01895 PhoU domain NX08_RS08295 PF00005 ABC transporter NX08_RS08300 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS08305 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS08310 PF12849 PBP superfamily domain NX08_RS08320 PF12849 PBP superfamily domain NX08_RS08335 PF00484 Carbonic anhydrase NX08_RS08340 PF01740 STAS domain NX08_RS08340 PF00916 Sulfate permease family NX08_RS08350 PF10576 Iron-sulfur binding domain of endonuclease III NX08_RS08350 PF00633 Helix-hairpin-helix motif NX08_RS08350 PF00730 HhH-GPD superfamily base excision DNA repair protein NX08_RS08360 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS08365 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase NX08_RS08365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_RS08370 PF00293 NUDIX domain NX08_RS08375 PF00581 Rhodanese-like domain NX08_RS08405 PF16326 ABC transporter C-terminal domain NX08_RS08405 PF12848 ABC transporter NX08_RS08405 PF00005 ABC transporter NX08_RS08415 PF01170 Putative RNA methylase family UPF0020 NX08_RS08415 PF10672 S-adenosylmethionine-dependent methyltransferase NX08_RS08415 PF02926 THUMP domain NX08_RS08420 PF01513 ATP-NAD kinase NX08_RS08435 PF00248 Aldo/keto reductase family NX08_RS08445 PF00929 Exonuclease NX08_RS08445 PF08411 Exonuclease C-terminal NX08_RS08450 PF01494 FAD binding domain NX08_RS08455 PF00266 Aminotransferase class-V NX08_RS08465 PF06052 3-hydroxyanthranilic acid dioxygenase NX08_RS08470 PF00484 Carbonic anhydrase NX08_RS08475 PF04299 Putative FMN-binding domain NX08_RS08495 PF01336 OB-fold nucleic acid binding domain NX08_RS08495 PF00152 tRNA synthetases class II (D, K and N) NX08_RS08500 PF01521 Iron-sulphur cluster biosynthesis NX08_RS08505 PF01250 Ribosomal protein S6 NX08_RS08510 PF01084 Ribosomal protein S18 NX08_RS08515 PF03948 Ribosomal protein L9, C-terminal domain NX08_RS08515 PF01281 Ribosomal protein L9, N-terminal domain NX08_RS08520 PF02463 RecF/RecN/SMC N terminal domain NX08_RS08525 PF04354 ZipA, C-terminal FtsZ-binding domain NX08_RS08535 PF00155 Aminotransferase class I and II NX08_RS08540 PF03120 NAD-dependent DNA ligase OB-fold domain NX08_RS08540 PF01653 NAD-dependent DNA ligase adenylation domain NX08_RS08540 PF00533 BRCA1 C Terminus (BRCT) domain NX08_RS08540 PF12826 Helix-hairpin-helix motif NX08_RS08540 PF03119 NAD-dependent DNA ligase C4 zinc finger domain NX08_RS08545 PF00152 tRNA synthetases class II (D, K and N) NX08_RS08560 PF01008 Initiation factor 2 subunit family NX08_RS08565 PF03989 DNA gyrase C-terminal domain, beta-propeller NX08_RS08565 PF00521 DNA gyrase/topoisomerase IV, subunit A NX08_RS08605 PF17391 Urocanase N-terminal domain NX08_RS08605 PF17392 Urocanase C-terminal domain NX08_RS08605 PF01175 Urocanase Rossmann-like domain NX08_RS08615 PF00221 Aromatic amino acid lyase NX08_RS08620 PF07969 Amidohydrolase family NX08_RS08630 PF07702 UTRA domain NX08_RS08630 PF00392 Bacterial regulatory proteins, gntR family NX08_RS08655 PF01794 Ferric reductase like transmembrane component NX08_RS08660 PF00174 Oxidoreductase molybdopterin binding domain NX08_RS08665 PF00266 Aminotransferase class-V NX08_RS08670 PF01842 ACT domain NX08_RS08670 PF01817 Chorismate mutase type II NX08_RS08670 PF00800 Prephenate dehydratase NX08_RS08675 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NX08_RS08685 PF03544 Gram-negative bacterial TonB protein C-terminal NX08_RS08690 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NX08_RS08690 PF02403 Seryl-tRNA synthetase N-terminal domain NX08_RS08695 PF02525 Flavodoxin-like fold NX08_RS08700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS08700 PF03466 LysR substrate binding domain NX08_RS08735 PF00672 HAMP domain NX08_RS08735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS08735 PF02203 Tar ligand binding domain homologue NX08_RS08755 PF00072 Response regulator receiver domain NX08_RS08755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS08755 PF08448 PAS fold NX08_RS08755 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS08755 PF13188 PAS domain NX08_RS08760 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS08760 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS08760 PF00672 HAMP domain NX08_RS08760 PF01627 Hpt domain NX08_RS08760 PF00072 Response regulator receiver domain NX08_RS08765 PF06745 KaiC NX08_RS08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS08770 PF00072 Response regulator receiver domain NX08_RS08770 PF13426 PAS domain NX08_RS08780 PF03918 Cytochrome C biogenesis protein NX08_RS08785 PF08534 Redoxin NX08_RS08790 PF01578 Cytochrome C assembly protein NX08_RS08790 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NX08_RS08795 PF03100 CcmE NX08_RS08800 PF04995 Heme exporter protein D (CcmD) NX08_RS08805 PF01578 Cytochrome C assembly protein NX08_RS08810 PF00082 Subtilase family NX08_RS08820 PF08281 Sigma-70, region 4 NX08_RS08820 PF04542 Sigma-70 region 2 NX08_RS08835 PF00034 Cytochrome c NX08_RS08850 PF05523 WxcM-like, C-terminal NX08_RS08870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NX08_RS08875 PF01943 Polysaccharide biosynthesis protein NX08_RS08880 PF00535 Glycosyl transferase family 2 NX08_RS08895 PF08241 Methyltransferase domain NX08_RS08900 PF13382 Adenine deaminase C-terminal domain NX08_RS08900 PF01979 Amidohydrolase family NX08_RS08915 PF13579 Glycosyl transferase 4-like domain NX08_RS08915 PF00534 Glycosyl transferases group 1 NX08_RS08930 PF00005 ABC transporter NX08_RS08935 PF00005 ABC transporter NX08_RS08935 PF00664 ABC transporter transmembrane region NX08_RS08940 PF07690 Major Facilitator Superfamily NX08_RS08950 PF00296 Luciferase-like monooxygenase NX08_RS08965 PF03471 Transporter associated domain NX08_RS08965 PF00571 CBS domain NX08_RS08965 PF01595 Cyclin M transmembrane N-terminal domain NX08_RS08980 PF01384 Phosphate transporter family NX08_RS08985 PF02698 DUF218 domain NX08_RS08995 PF03129 Anticodon binding domain NX08_RS08995 PF02824 TGS domain NX08_RS08995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NX08_RS08995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NX08_RS09000 PF00707 Translation initiation factor IF-3, C-terminal domain NX08_RS09000 PF05198 Translation initiation factor IF-3, N-terminal domain NX08_RS09005 PF01632 Ribosomal protein L35 NX08_RS09010 PF00453 Ribosomal protein L20 NX08_RS09015 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain NX08_RS09015 PF01409 tRNA synthetases class II core domain (F) NX08_RS09020 PF03147 Ferredoxin-fold anticodon binding domain NX08_RS09020 PF03484 tRNA synthetase B5 domain NX08_RS09020 PF03483 B3/4 domain NX08_RS09020 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain NX08_RS09020 PF01588 Putative tRNA binding domain NX08_RS09025 PF00216 Bacterial DNA-binding protein NX08_RS09030 PF13411 MerR HTH family regulatory protein NX08_RS09050 PF02397 Bacterial sugar transferase NX08_RS09070 PF00534 Glycosyl transferases group 1 NX08_RS09070 PF13439 Glycosyltransferase Family 4 NX08_RS09080 PF14667 Polysaccharide biosynthesis C-terminal domain NX08_RS09095 PF03808 Glycosyl transferase WecB/TagA/CpsF family NX08_RS09110 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_RS09110 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_RS09115 PF16123 Hydroxyacylglutathione hydrolase C-terminus NX08_RS09115 PF00753 Metallo-beta-lactamase superfamily NX08_RS09120 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family NX08_RS09140 PF02780 Transketolase, C-terminal domain NX08_RS09140 PF13292 1-deoxy-D-xylulose-5-phosphate synthase NX08_RS09140 PF02779 Transketolase, pyrimidine binding domain NX08_RS09150 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS09150 PF12806 Acetyl-CoA dehydrogenase C-terminal like NX08_RS09150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS09150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS09160 PF08212 Lipocalin-like domain NX08_RS09195 PF00072 Response regulator receiver domain NX08_RS09195 PF13426 PAS domain NX08_RS09195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS09200 PF04362 Bacterial Fe(2+) trafficking NX08_RS09205 PF14815 NUDIX domain NX08_RS09205 PF00730 HhH-GPD superfamily base excision DNA repair protein NX08_RS09205 PF00633 Helix-hairpin-helix motif NX08_RS09215 PF00448 SRP54-type protein, GTPase domain NX08_RS09215 PF02881 SRP54-type protein, helical bundle domain NX08_RS09225 PF05544 Proline racemase NX08_RS09250 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS09250 PF04324 BFD-like [2Fe-2S] binding domain NX08_RS09255 PF00701 Dihydrodipicolinate synthetase family NX08_RS09260 PF00171 Aldehyde dehydrogenase family NX08_RS09265 PF00557 Metallopeptidase family M24 NX08_RS09265 PF01321 Creatinase/Prolidase N-terminal domain NX08_RS09280 PF13520 Amino acid permease NX08_RS09310 PF09286 Pro-kumamolisin, activation domain NX08_RS09310 PF00082 Subtilase family NX08_RS09335 PF07532 Bacterial Ig-like domain (group 4) NX08_RS09340 PF04616 Glycosyl hydrolases family 43 NX08_RS09350 PF07715 TonB-dependent Receptor Plug Domain NX08_RS09350 PF00593 TonB dependent receptor NX08_RS09380 PF00183 Hsp90 protein NX08_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS09390 PF01467 Cytidylyltransferase-like NX08_RS09405 PF00037 4Fe-4S binding domain NX08_RS09425 PF00759 Glycosyl hydrolase family 9 NX08_RS09425 PF02927 Cellulase N-terminal ig-like domain NX08_RS09470 PF02547 Queuosine biosynthesis protein NX08_RS09475 PF01702 Queuine tRNA-ribosyltransferase NX08_RS09480 PF02699 Preprotein translocase subunit NX08_RS09485 PF02355 Protein export membrane protein NX08_RS09485 PF13721 SecD export protein N-terminal TM region NX08_RS09485 PF07549 SecD/SecF GG Motif NX08_RS09490 PF02355 Protein export membrane protein NX08_RS09490 PF07549 SecD/SecF GG Motif NX08_RS09525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit NX08_RS09530 PF00294 pfkB family carbohydrate kinase NX08_RS09535 PF02896 PEP-utilising enzyme, TIM barrel domain NX08_RS09535 PF00381 PTS HPr component phosphorylation site NX08_RS09535 PF00391 PEP-utilising enzyme, mobile domain NX08_RS09535 PF05524 PEP-utilising enzyme, N-terminal NX08_RS09535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NX08_RS09540 PF00356 Bacterial regulatory proteins, lacI family NX08_RS09595 PF00873 AcrB/AcrD/AcrF family NX08_RS09600 PF00529 HlyD membrane-fusion protein of T1SS NX08_RS09600 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS09610 PF05088 Bacterial NAD-glutamate dehydrogenase NX08_RS09615 PF07690 Major Facilitator Superfamily NX08_RS09625 PF00072 Response regulator receiver domain NX08_RS09630 PF00072 Response regulator receiver domain NX08_RS09630 PF01627 Hpt domain NX08_RS09630 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) NX08_RS09630 PF00672 HAMP domain NX08_RS09630 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS09635 PF04286 Protein of unknown function (DUF445) NX08_RS09645 PF00005 ABC transporter NX08_RS09650 PF00202 Aminotransferase class-III NX08_RS09660 PF07690 Major Facilitator Superfamily NX08_RS09665 PF02634 FdhD/NarQ family NX08_RS09670 PF00384 Molybdopterin oxidoreductase NX08_RS09685 PF00083 Sugar (and other) transporter NX08_RS09685 PF07690 Major Facilitator Superfamily NX08_RS09690 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS09690 PF00072 Response regulator receiver domain NX08_RS09695 PF01266 FAD dependent oxidoreductase NX08_RS09700 PF00120 Glutamine synthetase, catalytic domain NX08_RS09710 PF00120 Glutamine synthetase, catalytic domain NX08_RS09715 PF00202 Aminotransferase class-III NX08_RS09720 PF13416 Bacterial extracellular solute-binding protein NX08_RS09725 PF13533 Biotin-lipoyl like NX08_RS09730 PF07690 Major Facilitator Superfamily NX08_RS09735 PF02321 Outer membrane efflux protein NX08_RS09740 PF00005 ABC transporter NX08_RS09740 PF08402 TOBE domain NX08_RS09745 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS09750 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS09755 PF00171 Aldehyde dehydrogenase family NX08_RS09770 PF03471 Transporter associated domain NX08_RS09770 PF00571 CBS domain NX08_RS09785 PF02130 Uncharacterized protein family UPF0054 NX08_RS09795 PF02562 PhoH-like protein NX08_RS09800 PF00919 Uncharacterized protein family UPF0004 NX08_RS09800 PF04055 Radical SAM superfamily NX08_RS09800 PF01938 TRAM domain NX08_RS09815 PF01464 Transglycosylase SLT domain NX08_RS09820 PF00355 Rieske [2Fe-2S] domain NX08_RS09820 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal NX08_RS09825 PF00033 Cytochrome b/b6/petB NX08_RS09825 PF00032 Cytochrome b(C-terminal)/b6/petD NX08_RS09830 PF02167 Cytochrome C1 family NX08_RS09835 PF00043 Glutathione S-transferase, C-terminal domain NX08_RS09835 PF02798 Glutathione S-transferase, N-terminal domain NX08_RS09840 PF04386 Stringent starvation protein B NX08_RS09860 PF00106 short chain dehydrogenase NX08_RS09865 PF00270 DEAD/DEAH box helicase NX08_RS09865 PF00271 Helicase conserved C-terminal domain NX08_RS09865 PF08494 DEAD/H associated NX08_RS09870 PF02245 Methylpurine-DNA glycosylase (MPG) NX08_RS09875 PF00672 HAMP domain NX08_RS09875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS09875 PF02203 Tar ligand binding domain homologue NX08_RS09880 PF01584 CheW-like domain NX08_RS09905 PF13298 DNA polymerase Ligase (LigD) NX08_RS09905 PF04679 ATP dependent DNA ligase C terminal region NX08_RS09905 PF01068 ATP dependent DNA ligase domain NX08_RS09910 PF01612 3'-5' exonuclease NX08_RS09910 PF00570 HRDC domain NX08_RS09925 PF03781 Sulfatase-modifying factor enzyme 1 NX08_RS09935 PF02601 Exonuclease VII, large subunit NX08_RS09935 PF13742 OB-fold nucleic acid binding domain NX08_RS09945 PF08331 Domain of unknown function (DUF1730) NX08_RS09950 PF01256 Carbohydrate kinase NX08_RS09950 PF03853 YjeF-related protein N-terminus NX08_RS09955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE NX08_RS09960 PF11741 AMIN domain NX08_RS09960 PF01520 N-acetylmuramoyl-L-alanine amidase NX08_RS09965 PF08676 MutL C terminal dimerisation domain NX08_RS09965 PF01119 DNA mismatch repair protein, C-terminal domain NX08_RS09985 PF05233 PHB accumulation regulatory domain NX08_RS09985 PF07879 PHB/PHA accumulation regulator DNA-binding domain NX08_RS09990 PF00106 short chain dehydrogenase NX08_RS09995 PF00749 tRNA synthetases class I (E and Q), catalytic domain NX08_RS10000 PF01435 Peptidase family M48 NX08_RS10005 PF00072 Response regulator receiver domain NX08_RS10005 PF00563 EAL domain NX08_RS10005 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS10015 PF07152 YaeQ protein NX08_RS10020 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 NX08_RS10025 PF00313 'Cold-shock' DNA-binding domain NX08_RS10030 PF02798 Glutathione S-transferase, N-terminal domain NX08_RS10030 PF14497 Glutathione S-transferase, C-terminal domain NX08_RS10040 PF02696 Uncharacterized ACR, YdiU/UPF0061 family NX08_RS10045 PF00156 Phosphoribosyl transferase domain NX08_RS10050 PF03880 DbpA RNA binding domain NX08_RS10050 PF00271 Helicase conserved C-terminal domain NX08_RS10050 PF00270 DEAD/DEAH box helicase NX08_RS10055 PF12848 ABC transporter NX08_RS10055 PF16326 ABC transporter C-terminal domain NX08_RS10055 PF00005 ABC transporter NX08_RS10070 PF00545 ribonuclease NX08_RS10075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NX08_RS10075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NX08_RS10080 PF00459 Inositol monophosphatase family NX08_RS10085 PF00588 SpoU rRNA Methylase family NX08_RS10095 PF13188 PAS domain NX08_RS10095 PF00563 EAL domain NX08_RS10095 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS10095 PF03707 Bacterial signalling protein N terminal repeat NX08_RS10105 PF04055 Radical SAM superfamily NX08_RS10110 PF08207 Elongation factor P (EF-P) KOW-like domain NX08_RS10110 PF09285 Elongation factor P, C-terminal NX08_RS10110 PF01132 Elongation factor P (EF-P) OB domain NX08_RS10125 PF01979 Amidohydrolase family NX08_RS10135 PF13419 Haloacid dehalogenase-like hydrolase NX08_RS10165 PF05985 Ethanolamine ammonia-lyase light chain (EutC) NX08_RS10180 PF01551 Peptidase family M23 NX08_RS10180 PF08460 Bacterial SH3 domain NX08_RS10185 PF01979 Amidohydrolase family NX08_RS10190 PF01809 Putative membrane protein insertion efficiency factor NX08_RS10195 PF01258 Prokaryotic dksA/traR C4-type zinc finger NX08_RS10205 PF02657 Fe-S metabolism associated domain NX08_RS10210 PF01406 tRNA synthetases class I (C) catalytic domain NX08_RS10210 PF09190 DALR domain NX08_RS10220 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NX08_RS10220 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NX08_RS10225 PF00764 Arginosuccinate synthase NX08_RS10235 PF01546 Peptidase family M20/M25/M40 NX08_RS10235 PF07687 Peptidase dimerisation domain NX08_RS10240 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase NX08_RS10240 PF00696 Amino acid kinase family NX08_RS10250 PF01118 Semialdehyde dehydrogenase, NAD binding domain NX08_RS10255 PF00206 Lyase NX08_RS10270 PF00696 Amino acid kinase family NX08_RS10270 PF01472 PUA domain NX08_RS10275 PF00171 Aldehyde dehydrogenase family NX08_RS10280 PF02129 X-Pro dipeptidyl-peptidase (S15 family) NX08_RS10280 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain NX08_RS10310 PF00005 ABC transporter NX08_RS10310 PF00664 ABC transporter transmembrane region NX08_RS10315 PF00664 ABC transporter transmembrane region NX08_RS10315 PF00005 ABC transporter NX08_RS10325 PF00313 'Cold-shock' DNA-binding domain NX08_RS10330 PF00561 alpha/beta hydrolase fold NX08_RS10340 PF03918 Cytochrome C biogenesis protein NX08_RS10345 PF08534 Redoxin NX08_RS10350 PF01578 Cytochrome C assembly protein NX08_RS10350 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal NX08_RS10355 PF03100 CcmE NX08_RS10365 PF01578 Cytochrome C assembly protein NX08_RS10370 PF03379 CcmB protein NX08_RS10375 PF00005 ABC transporter NX08_RS10380 PF00155 Aminotransferase class I and II NX08_RS10390 PF00795 Carbon-nitrogen hydrolase NX08_RS10405 PF01479 S4 domain NX08_RS10405 PF00849 RNA pseudouridylate synthase NX08_RS10410 PF04079 Segregation and condensation complex subunit ScpB NX08_RS10415 PF02616 Segregation and condensation protein ScpA NX08_RS10420 PF03795 YCII-related domain NX08_RS10430 PF00356 Bacterial regulatory proteins, lacI family NX08_RS10450 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS10455 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS10480 PF00795 Carbon-nitrogen hydrolase NX08_RS10490 PF04371 Porphyromonas-type peptidyl-arginine deiminase NX08_RS10505 PF00444 Ribosomal protein L36 NX08_RS10510 PF02224 Cytidylate kinase NX08_RS10515 PF00575 S1 RNA binding domain NX08_RS10520 PF00216 Bacterial DNA-binding protein NX08_RS10530 PF18073 Rubredoxin metal binding domain NX08_RS10535 PF00953 Glycosyl transferase family 4 NX08_RS10540 PF02719 Polysaccharide biosynthesis protein NX08_RS10545 PF00483 Nucleotidyl transferase NX08_RS10565 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NX08_RS10565 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain NX08_RS10570 PF00478 IMP dehydrogenase / GMP reductase domain NX08_RS10570 PF00571 CBS domain NX08_RS10575 PF02540 NAD synthase NX08_RS10575 PF00958 GMP synthase C terminal domain NX08_RS10575 PF00117 Glutamine amidotransferase class-I NX08_RS10580 PF13356 Arm DNA-binding domain NX08_RS10580 PF00589 Phage integrase family NX08_RS10605 PF10134 Replication initiator protein A NX08_RS10620 PF17273 Family of unknown function (DUF5338) NX08_RS10630 PF18821 Large polyvalent protein-associated domain 7 NX08_RS10630 PF03432 Relaxase/Mobilisation nuclease domain NX08_RS10645 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NX08_RS10690 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) NX08_RS10695 PF00361 Proton-conducting membrane transporter NX08_RS10695 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus NX08_RS10695 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NX08_RS10700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS10700 PF03466 LysR substrate binding domain NX08_RS10705 PF03466 LysR substrate binding domain NX08_RS10705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS10720 PF03601 Conserved hypothetical protein 698 NX08_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS10725 PF03466 LysR substrate binding domain NX08_RS10740 PF00196 Bacterial regulatory proteins, luxR family NX08_RS10740 PF00072 Response regulator receiver domain NX08_RS10750 PF07730 Histidine kinase NX08_RS10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS10750 PF13492 GAF domain NX08_RS10750 PF13185 GAF domain NX08_RS10765 PF00857 Isochorismatase family NX08_RS10780 PF05977 Transmembrane secretion effector NX08_RS10790 PF00561 alpha/beta hydrolase fold NX08_RS10795 PF01566 Natural resistance-associated macrophage protein NX08_RS10800 PF02742 Iron dependent repressor, metal binding and dimerisation domain NX08_RS10800 PF01325 Iron dependent repressor, N-terminal DNA binding domain NX08_RS10805 PF14437 MafB19-like deaminase NX08_RS10810 PF00929 Exonuclease NX08_RS10815 PF05552 Conserved TM helix NX08_RS10815 PF00924 Mechanosensitive ion channel NX08_RS10820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain NX08_RS10820 PF02896 PEP-utilising enzyme, TIM barrel domain NX08_RS10820 PF00391 PEP-utilising enzyme, mobile domain NX08_RS10825 PF03618 Kinase/pyrophosphorylase NX08_RS10845 PF01066 CDP-alcohol phosphatidyltransferase NX08_RS10855 PF00561 alpha/beta hydrolase fold NX08_RS10870 PF01266 FAD dependent oxidoreductase NX08_RS10870 PF00355 Rieske [2Fe-2S] domain NX08_RS10880 PF00575 S1 RNA binding domain NX08_RS10880 PF16921 Tex protein YqgF-like domain NX08_RS10880 PF17674 HHH domain NX08_RS10880 PF09371 Tex-like protein N-terminal domain NX08_RS10890 PF00072 Response regulator receiver domain NX08_RS10890 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS10890 PF09308 LuxQ, periplasmic NX08_RS10935 PF00034 Cytochrome c NX08_RS10945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS10950 PF00873 AcrB/AcrD/AcrF family NX08_RS10955 PF00873 AcrB/AcrD/AcrF family NX08_RS10965 PF01081 KDPG and KHG aldolase NX08_RS10970 PF00920 Dehydratase family NX08_RS10975 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase NX08_RS10980 PF02685 Glucokinase NX08_RS10985 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NX08_RS10985 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NX08_RS10990 PF17912 MalK OB fold domain NX08_RS10990 PF00005 ABC transporter NX08_RS11010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NX08_RS11015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit NX08_RS11020 PF02910 Fumarate reductase flavoprotein C-term NX08_RS11020 PF00890 FAD binding domain NX08_RS11030 PF13085 2Fe-2S iron-sulfur cluster binding domain NX08_RS11035 PF03937 Flavinator of succinate dehydrogenase NX08_RS11045 PF02687 FtsX-like permease family NX08_RS11045 PF12704 MacB-like periplasmic core domain NX08_RS11050 PF00005 ABC transporter NX08_RS11060 PF03772 Competence protein NX08_RS11060 PF00753 Metallo-beta-lactamase superfamily NX08_RS11065 PF01618 MotA/TolQ/ExbB proton channel family NX08_RS11075 PF00005 ABC transporter NX08_RS11075 PF00664 ABC transporter transmembrane region NX08_RS11080 PF02606 Tetraacyldisaccharide-1-P 4'-kinase NX08_RS11085 PF02348 Cytidylyltransferase NX08_RS11090 PF01451 Low molecular weight phosphotyrosine protein phosphatase NX08_RS11100 PF01541 GIY-YIG catalytic domain NX08_RS11100 PF08459 UvrC Helix-hairpin-helix N-terminal NX08_RS11100 PF02151 UvrB/uvrC motif NX08_RS11105 PF01066 CDP-alcohol phosphatidyltransferase NX08_RS11130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain NX08_RS11130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain NX08_RS11130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NX08_RS11140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_RS11150 PF17773 UPF0176 acylphosphatase like domain NX08_RS11150 PF00581 Rhodanese-like domain NX08_RS11155 PF00072 Response regulator receiver domain NX08_RS11155 PF00196 Bacterial regulatory proteins, luxR family NX08_RS11165 PF00575 S1 RNA binding domain NX08_RS11165 PF10150 Ribonuclease E/G family NX08_RS11165 PF12111 Polyribonucleotide phosphorylase C terminal NX08_RS11170 PF01479 S4 domain NX08_RS11170 PF00849 RNA pseudouridylate synthase NX08_RS11175 PF11737 Protein of unknown function (DUF3300) NX08_RS11180 PF02535 ZIP Zinc transporter NX08_RS11195 PF01329 Pterin 4 alpha carbinolamine dehydratase NX08_RS11200 PF01106 NifU-like domain NX08_RS11235 PF00072 Response regulator receiver domain NX08_RS11235 PF00486 Transcriptional regulatory protein, C terminal NX08_RS11240 PF03150 Di-haem cytochrome c peroxidase NX08_RS11240 PF00034 Cytochrome c NX08_RS11245 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS11250 PF03466 LysR substrate binding domain NX08_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS11255 PF06812 ImpA, N-terminal, type VI secretion system NX08_RS11270 PF00069 Protein kinase domain NX08_RS11285 PF06761 Intracellular multiplication and human macrophage-killing NX08_RS11285 PF14331 ImcF-related N-terminal domain NX08_RS11285 PF06744 Type VI secretion protein IcmF C-terminal NX08_RS11295 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE NX08_RS11310 PF04717 Type VI secretion system, phage-baseplate injector NX08_RS11310 PF06715 Gp5 C-terminal repeat (3 copies) NX08_RS11330 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS11330 PF07724 AAA domain (Cdc48 subfamily) NX08_RS11330 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_RS11330 PF17871 AAA lid domain NX08_RS11340 PF05947 Type VI secretion system, TssF NX08_RS11345 PF04965 Gene 25-like lysozyme NX08_RS11350 PF07024 ImpE protein NX08_RS11355 PF05638 Type VI secretion system effector, Hcp NX08_RS11360 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath NX08_RS11365 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 NX08_RS11370 PF13276 HTH-like domain NX08_RS11370 PF13683 Integrase core domain NX08_RS11375 PF07995 Glucose / Sorbosone dehydrogenase NX08_RS11400 PF00082 Subtilase family NX08_RS11400 PF03797 Autotransporter beta-domain NX08_RS11410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS11415 PF00873 AcrB/AcrD/AcrF family NX08_RS11425 PF13426 PAS domain NX08_RS11425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS11425 PF08448 PAS fold NX08_RS11425 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS11425 PF00072 Response regulator receiver domain NX08_RS11430 PF00072 Response regulator receiver domain NX08_RS11430 PF00196 Bacterial regulatory proteins, luxR family NX08_RS11440 PF08448 PAS fold NX08_RS11440 PF00563 EAL domain NX08_RS11440 PF08447 PAS fold NX08_RS11440 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS11455 PF05974 Domain of unknown function (DUF892) NX08_RS11480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NX08_RS11480 PF10414 Sirohaem synthase dimerisation region NX08_RS11480 PF14824 Sirohaem biosynthesis protein central NX08_RS11490 PF12804 MobA-like NTP transferase domain NX08_RS11495 PF03453 MoeA N-terminal region (domain I and II) NX08_RS11495 PF00994 Probable molybdopterin binding domain NX08_RS11495 PF03454 MoeA C-terminal region (domain IV) NX08_RS11500 PF03372 Endonuclease/Exonuclease/phosphatase family NX08_RS11510 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS11510 PF00107 Zinc-binding dehydrogenase NX08_RS11510 PF13823 Alcohol dehydrogenase GroES-associated NX08_RS11525 PF00067 Cytochrome P450 NX08_RS11540 PF00899 ThiF family NX08_RS11545 PF00994 Probable molybdopterin binding domain NX08_RS11545 PF03454 MoeA C-terminal region (domain IV) NX08_RS11545 PF03453 MoeA N-terminal region (domain I and II) NX08_RS11555 PF01926 50S ribosome-binding GTPase NX08_RS11555 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal NX08_RS11560 PF13360 PQQ-like domain NX08_RS11560 PF01011 PQQ enzyme repeat NX08_RS11570 PF13464 Domain of unknown function (DUF4115) NX08_RS11580 PF04055 Radical SAM superfamily NX08_RS11585 PF00334 Nucleoside diphosphate kinase NX08_RS11595 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NX08_RS11595 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS11595 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NX08_RS11600 PF00108 Thiolase, N-terminal domain NX08_RS11600 PF02803 Thiolase, C-terminal domain NX08_RS11605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) NX08_RS11610 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS11610 PF16193 AAA C-terminal domain NX08_RS11610 PF12002 MgsA AAA+ ATPase C terminal NX08_RS11620 PF03548 Outer membrane lipoprotein carrier protein LolA NX08_RS11630 PF01580 FtsK/SpoIIIE family NX08_RS11630 PF09397 Ftsk gamma domain NX08_RS11630 PF17854 FtsK alpha domain NX08_RS11630 PF13491 4TM region of DNA translocase FtsK/SpoIIIE NX08_RS11635 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS11645 PF03588 Leucyl/phenylalanyl-tRNA protein transferase NX08_RS11650 PF01176 Translation initiation factor 1A / IF-1 NX08_RS11655 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS11655 PF07724 AAA domain (Cdc48 subfamily) NX08_RS11655 PF17871 AAA lid domain NX08_RS11655 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_RS11655 PF02861 Clp amino terminal domain, pathogenicity island component NX08_RS11660 PF02617 ATP-dependent Clp protease adaptor protein ClpS NX08_RS11665 PF00293 NUDIX domain NX08_RS11675 PF04356 Protein of unknown function (DUF489) NX08_RS11685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS11685 PF00672 HAMP domain NX08_RS11685 PF12729 Four helix bundle sensory module for signal transduction NX08_RS11695 PF00563 EAL domain NX08_RS11695 PF03707 Bacterial signalling protein N terminal repeat NX08_RS11695 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS11700 PF07730 Histidine kinase NX08_RS11700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS11705 PF00563 EAL domain NX08_RS11705 PF03707 Bacterial signalling protein N terminal repeat NX08_RS11705 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS11710 PF13426 PAS domain NX08_RS11710 PF13188 PAS domain NX08_RS11710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS11710 PF00989 PAS fold NX08_RS11710 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS11730 PF00072 Response regulator receiver domain NX08_RS11730 PF01584 CheW-like domain NX08_RS11740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_RS11740 PF00460 Flagella basal body rod protein NX08_RS11745 PF03963 Flagellar hook capping protein - N-terminal region NX08_RS11750 PF00460 Flagella basal body rod protein NX08_RS11750 PF07559 Flagellar basal body protein FlaE NX08_RS11750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_RS11755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_RS11755 PF00460 Flagella basal body rod protein NX08_RS11770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_RS11770 PF00460 Flagella basal body rod protein NX08_RS11775 PF02107 Flagellar L-ring protein NX08_RS11780 PF02119 Flagellar P-ring protein NX08_RS11785 PF10135 Rod binding protein NX08_RS11785 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase NX08_RS11790 PF07196 Flagellin hook IN motif NX08_RS11790 PF06429 Flagellar basal body rod FlgEFG protein C-terminal NX08_RS11800 PF00700 Bacterial flagellin C-terminal helical region NX08_RS11800 PF00669 Bacterial flagellin N-terminal helical region NX08_RS11805 PF07196 Flagellin hook IN motif NX08_RS11805 PF02465 Flagellar hook-associated protein 2 N-terminus NX08_RS11805 PF07195 Flagellar hook-associated protein 2 C-terminus NX08_RS11810 PF02561 Flagellar protein FliS NX08_RS11825 PF00196 Bacterial regulatory proteins, luxR family NX08_RS11825 PF00072 Response regulator receiver domain NX08_RS11830 PF04552 Sigma-54, DNA binding domain NX08_RS11830 PF00309 Sigma-54 factor, Activator interacting domain (AID) NX08_RS11830 PF04963 Sigma-54 factor, core binding domain NX08_RS11835 PF00072 Response regulator receiver domain NX08_RS11835 PF01339 CheB methylesterase NX08_RS11840 PF06490 Flagellar regulatory protein FleQ NX08_RS11840 PF02954 Bacterial regulatory protein, Fis family NX08_RS11840 PF00158 Sigma-54 interaction domain NX08_RS11845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family NX08_RS11855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal NX08_RS11855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III NX08_RS11890 PF00534 Glycosyl transferases group 1 NX08_RS11890 PF00535 Glycosyl transferase family 2 NX08_RS11895 PF02049 Flagellar hook-basal body complex protein FliE NX08_RS11900 PF08345 Flagellar M-ring protein C-terminal NX08_RS11900 PF01514 Secretory protein of YscJ/FliF family NX08_RS11905 PF14842 FliG N-terminal domain NX08_RS11905 PF14841 FliG middle domain NX08_RS11905 PF01706 FliG C-terminal domain NX08_RS11915 PF18269 T3SS EscN ATPase C-terminal domain NX08_RS11915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_RS11935 PF02154 Flagellar motor switch protein FliM NX08_RS11935 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NX08_RS11940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term NX08_RS11945 PF04347 Flagellar biosynthesis protein, FliO NX08_RS11950 PF00813 FliP family NX08_RS11960 PF01313 Bacterial export proteins, family 3 NX08_RS11965 PF01311 Bacterial export proteins, family 1 NX08_RS11970 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS11975 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS11980 PF03707 Bacterial signalling protein N terminal repeat NX08_RS11980 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS11980 PF00563 EAL domain NX08_RS11985 PF01312 FlhB HrpN YscU SpaS Family NX08_RS11990 PF00771 FHIPEP family NX08_RS12000 PF00448 SRP54-type protein, GTPase domain NX08_RS12005 PF10609 NUBPL iron-transfer P-loop NTPase NX08_RS12010 PF04542 Sigma-70 region 2 NX08_RS12010 PF04539 Sigma-70 region 3 NX08_RS12010 PF04545 Sigma-70, region 4 NX08_RS12015 PF00072 Response regulator receiver domain NX08_RS12020 PF04344 Chemotaxis phosphatase, CheZ NX08_RS12025 PF00072 Response regulator receiver domain NX08_RS12025 PF01627 Hpt domain NX08_RS12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS12025 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_RS12025 PF01584 CheW-like domain NX08_RS12085 PF01618 MotA/TolQ/ExbB proton channel family NX08_RS12090 PF00691 OmpA family NX08_RS12090 PF13677 Membrane MotB of proton-channel complex MotA/MotB NX08_RS12095 PF13614 AAA domain NX08_RS12100 PF01584 CheW-like domain NX08_RS12110 PF00072 Response regulator receiver domain NX08_RS12115 PF01584 CheW-like domain NX08_RS12115 PF09078 CheY binding NX08_RS12115 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_RS12115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS12115 PF01627 Hpt domain NX08_RS12120 PF02203 Tar ligand binding domain homologue NX08_RS12120 PF00672 HAMP domain NX08_RS12120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12140 PF02203 Tar ligand binding domain homologue NX08_RS12140 PF00672 HAMP domain NX08_RS12140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12150 PF00672 HAMP domain NX08_RS12150 PF02203 Tar ligand binding domain homologue NX08_RS12150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12155 PF02203 Tar ligand binding domain homologue NX08_RS12155 PF00672 HAMP domain NX08_RS12160 PF02203 Tar ligand binding domain homologue NX08_RS12160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12160 PF00672 HAMP domain NX08_RS12165 PF02203 Tar ligand binding domain homologue NX08_RS12165 PF00672 HAMP domain NX08_RS12165 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12175 PF00672 HAMP domain NX08_RS12175 PF02203 Tar ligand binding domain homologue NX08_RS12180 PF02203 Tar ligand binding domain homologue NX08_RS12180 PF00672 HAMP domain NX08_RS12180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12190 PF07238 PilZ domain NX08_RS12190 PF07317 Flagellar regulator YcgR NX08_RS12195 PF01584 CheW-like domain NX08_RS12205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS12210 PF01739 CheR methyltransferase, SAM binding domain NX08_RS12210 PF03705 CheR methyltransferase, all-alpha domain NX08_RS12215 PF03975 CheD chemotactic sensory transduction NX08_RS12220 PF00072 Response regulator receiver domain NX08_RS12220 PF01339 CheB methylesterase NX08_RS12225 PF00563 EAL domain NX08_RS12225 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS12225 PF03707 Bacterial signalling protein N terminal repeat NX08_RS12230 PF00561 alpha/beta hydrolase fold NX08_RS12235 PF00330 Aconitase family (aconitate hydratase) NX08_RS12235 PF06434 Aconitate hydratase 2 N-terminus NX08_RS12235 PF11791 Aconitate B N-terminal domain NX08_RS12250 PF00694 Aconitase C-terminal domain NX08_RS12250 PF00330 Aconitase family (aconitate hydratase) NX08_RS12260 PF00501 AMP-binding enzyme NX08_RS12260 PF13193 AMP-binding enzyme C-terminal domain NX08_RS12270 PF05598 Transposase domain (DUF772) NX08_RS12270 PF01609 Transposase DDE domain NX08_RS12285 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS12295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS12295 PF01627 Hpt domain NX08_RS12295 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS12295 PF00072 Response regulator receiver domain NX08_RS12300 PF00072 Response regulator receiver domain NX08_RS12305 PF00152 tRNA synthetases class II (D, K and N) NX08_RS12305 PF01336 OB-fold nucleic acid binding domain NX08_RS12335 PF17768 RecJ OB domain NX08_RS12335 PF01368 DHH family NX08_RS12335 PF02272 DHHA1 domain NX08_RS12345 PF03449 Transcription elongation factor, N-terminal NX08_RS12345 PF01272 Transcription elongation factor, GreA/GreB, C-term NX08_RS12350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain NX08_RS12350 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain NX08_RS12350 PF02142 MGS-like domain NX08_RS12360 PF00117 Glutamine amidotransferase class-I NX08_RS12360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain NX08_RS12365 PF01113 Dihydrodipicolinate reductase, N-terminus NX08_RS12365 PF05173 Dihydrodipicolinate reductase, C-terminus NX08_RS12370 PF03475 3-alpha domain NX08_RS12370 PF03473 MOSC domain NX08_RS12375 PF00155 Aminotransferase class I and II NX08_RS12390 PF07670 Nucleoside recognition NX08_RS12390 PF07664 Ferrous iron transport protein B C terminus NX08_RS12390 PF02421 Ferrous iron transport protein B NX08_RS12400 PF00378 Enoyl-CoA hydratase/isomerase NX08_RS12410 PF00682 HMGL-like NX08_RS12415 PF00106 short chain dehydrogenase NX08_RS12420 PF01132 Elongation factor P (EF-P) OB domain NX08_RS12420 PF09285 Elongation factor P, C-terminal NX08_RS12420 PF08207 Elongation factor P (EF-P) KOW-like domain NX08_RS12440 PF02913 FAD linked oxidases, C-terminal domain NX08_RS12440 PF01565 FAD binding domain NX08_RS12445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NX08_RS12445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NX08_RS12460 PF13520 Amino acid permease NX08_RS12465 PF00596 Class II Aldolase and Adducin N-terminal domain NX08_RS12470 PF03079 ARD/ARD' family NX08_RS12500 PF01502 Phosphoribosyl-AMP cyclohydrolase NX08_RS12500 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase NX08_RS12505 PF00977 Histidine biosynthesis protein NX08_RS12510 PF00977 Histidine biosynthesis protein NX08_RS12515 PF00117 Glutamine amidotransferase class-I NX08_RS12520 PF00475 Imidazoleglycerol-phosphate dehydratase NX08_RS12525 PF00155 Aminotransferase class I and II NX08_RS12530 PF00815 Histidinol dehydrogenase NX08_RS12535 PF08029 HisG, C-terminal domain NX08_RS12535 PF01634 ATP phosphoribosyltransferase NX08_RS12545 PF03129 Anticodon binding domain NX08_RS12545 PF13393 Histidyl-tRNA synthetase NX08_RS12550 PF00027 Cyclic nucleotide-binding domain NX08_RS12550 PF13545 Crp-like helix-turn-helix domain NX08_RS12560 PF14821 Threonine synthase N terminus NX08_RS12560 PF00291 Pyridoxal-phosphate dependent enzyme NX08_RS12570 PF08544 GHMP kinases C terminal NX08_RS12570 PF00288 GHMP kinases N terminal domain NX08_RS12575 PF01842 ACT domain NX08_RS12575 PF00696 Amino acid kinase family NX08_RS12575 PF00742 Homoserine dehydrogenase NX08_RS12575 PF03447 Homoserine dehydrogenase, NAD binding domain NX08_RS12575 PF13840 ACT domain NX08_RS12600 PF03412 Peptidase C39 family NX08_RS12600 PF00664 ABC transporter transmembrane region NX08_RS12600 PF00005 ABC transporter NX08_RS12665 PF01381 Helix-turn-helix NX08_RS12720 PF00665 Integrase core domain NX08_RS12805 PF02534 Type IV secretory system Conjugative DNA transfer NX08_RS12880 PF05114 Protein of unknown function (DUF692) NX08_RS12895 PF02666 Phosphatidylserine decarboxylase NX08_RS12900 PF04002 RadC-like JAB domain NX08_RS12960 PF00171 Aldehyde dehydrogenase family NX08_RS12975 PF01180 Dihydroorotate dehydrogenase NX08_RS12980 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain NX08_RS12980 PF01565 FAD binding domain NX08_RS12985 PF00892 EamA-like transporter family NX08_RS12995 PF01177 Asp/Glu/Hydantoin racemase NX08_RS13010 PF01569 PAP2 superfamily NX08_RS13015 PF04551 GcpE protein NX08_RS13025 PF00072 Response regulator receiver domain NX08_RS13030 PF00150 Cellulase (glycosyl hydrolase family 5) NX08_RS13030 PF02013 Cellulose or protein binding domain NX08_RS13035 PF00563 EAL domain NX08_RS13035 PF03707 Bacterial signalling protein N terminal repeat NX08_RS13035 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS13045 PF00474 Sodium:solute symporter family NX08_RS13055 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_RS13055 PF14310 Fibronectin type III-like domain NX08_RS13055 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_RS13075 PF00342 Phosphoglucose isomerase NX08_RS13080 PF02261 Aspartate decarboxylase NX08_RS13085 PF02569 Pantoate-beta-alanine ligase NX08_RS13090 PF02548 Ketopantoate hydroxymethyltransferase NX08_RS13095 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) NX08_RS13100 PF12626 Polymerase A arginine-rich C-terminus NX08_RS13100 PF01743 Poly A polymerase head domain NX08_RS13100 PF12627 Probable RNA and SrmB- binding site of polymerase A NX08_RS13115 PF02649 Type I GTP cyclohydrolase folE2 NX08_RS13145 PF00083 Sugar (and other) transporter NX08_RS13155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain NX08_RS13155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain NX08_RS13165 PF17137 Domain of unknown function (DUF5110) NX08_RS13165 PF01055 Glycosyl hydrolases family 31 NX08_RS13165 PF16338 Domain of unknown function (DUF4968) NX08_RS13180 PF00942 Cellulose binding domain NX08_RS13180 PF03442 Carbohydrate binding domain X2 NX08_RS13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS13220 PF03466 LysR substrate binding domain NX08_RS13225 PF01081 KDPG and KHG aldolase NX08_RS13230 PF13378 Enolase C-terminal domain-like NX08_RS13230 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_RS13235 PF08450 SMP-30/Gluconolactonase/LRE-like region NX08_RS13240 PF05035 2-keto-3-deoxy-galactonokinase NX08_RS13245 PF11953 Domain of unknown function (DUF3470) NX08_RS13245 PF00037 4Fe-4S binding domain NX08_RS13255 PF00701 Dihydrodipicolinate synthetase family NX08_RS13270 PF00578 AhpC/TSA family NX08_RS13275 PF13638 PIN domain NX08_RS13275 PF02562 PhoH-like protein NX08_RS13290 PF02581 Thiamine monophosphate synthase NX08_RS13290 PF08543 Phosphomethylpyrimidine kinase NX08_RS13315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS13315 PF03466 LysR substrate binding domain NX08_RS13320 PF02678 Pirin NX08_RS13320 PF17954 Quercetinase C-terminal cupin domain NX08_RS13325 PF08447 PAS fold NX08_RS13325 PF13426 PAS domain NX08_RS13325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS13340 PF02599 Global regulator protein family NX08_RS13345 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain NX08_RS13345 PF02272 DHHA1 domain NX08_RS13345 PF01411 tRNA synthetases class II (A) NX08_RS13350 PF02631 RecX family NX08_RS13355 PF00154 recA bacterial DNA recombination protein NX08_RS13360 PF01726 LexA DNA binding domain NX08_RS13360 PF00717 Peptidase S24-like NX08_RS13365 PF03109 ABC1 family NX08_RS13370 PF02464 Competence-damaged protein NX08_RS13375 PF01926 50S ribosome-binding GTPase NX08_RS13375 PF16360 GTP-binding GTPase Middle Region NX08_RS13375 PF13167 GTP-binding GTPase N-terminal NX08_RS13380 PF17209 Hfq protein NX08_RS13390 PF00809 Pterin binding enzyme NX08_RS13395 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS13395 PF06480 FtsH Extracellular NX08_RS13395 PF17862 AAA+ lid domain NX08_RS13395 PF01434 Peptidase family M41 NX08_RS13400 PF01728 FtsJ-like methyltransferase NX08_RS13405 PF01985 CRS1 / YhbY (CRM) domain NX08_RS13410 PF04430 Protein of unknown function (DUF498/DUF598) NX08_RS13415 PF01551 Peptidase family M23 NX08_RS13415 PF01476 LysM domain NX08_RS13420 PF09335 SNARE associated Golgi protein NX08_RS13430 PF01975 Survival protein SurE NX08_RS13435 PF01713 Smr domain NX08_RS13440 PF01142 tRNA pseudouridine synthase D (TruD) NX08_RS13445 PF02542 YgbB family NX08_RS13450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NX08_RS13455 PF04977 Septum formation initiator NX08_RS13460 PF00113 Enolase, C-terminal TIM barrel domain NX08_RS13460 PF03952 Enolase, N-terminal domain NX08_RS13470 PF00793 DAHP synthetase I family NX08_RS13475 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS13480 PF06418 CTP synthase N-terminus NX08_RS13480 PF00117 Glutamine amidotransferase class-I NX08_RS13490 PF00204 DNA gyrase B NX08_RS13490 PF00986 DNA gyrase B subunit, carboxyl terminus NX08_RS13490 PF01751 Toprim domain NX08_RS13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS13525 PF03135 CagE, TrbE, VirB family, component of type IV transporter system NX08_RS13530 PF05101 Type IV secretory pathway, VirB3-like protein NX08_RS13540 PF01464 Transglycosylase SLT domain NX08_RS13545 PF00437 Type II/IV secretion system protein NX08_RS13550 PF03743 Bacterial conjugation TrbI-like protein NX08_RS13570 PF02534 Type IV secretory system Conjugative DNA transfer NX08_RS13585 PF02151 UvrB/uvrC motif NX08_RS13585 PF12344 Ultra-violet resistance protein B NX08_RS13585 PF04851 Type III restriction enzyme, res subunit NX08_RS13585 PF17757 UvrB interaction domain NX08_RS13585 PF00271 Helicase conserved C-terminal domain NX08_RS13590 PF00114 Pilin (bacterial filament) NX08_RS13590 PF07963 Prokaryotic N-terminal methylation motif NX08_RS13600 PF07963 Prokaryotic N-terminal methylation motif NX08_RS13600 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor NX08_RS13605 PF05567 Neisseria PilC beta-propeller domain NX08_RS13625 PF07963 Prokaryotic N-terminal methylation motif NX08_RS13625 PF12019 Type II transport protein GspH NX08_RS13630 PF11892 Domain of unknown function (DUF3412) NX08_RS13630 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases NX08_RS13630 PF03641 Possible lysine decarboxylase NX08_RS13635 PF00593 TonB dependent receptor NX08_RS13640 PF01914 MarC family integral membrane protein NX08_RS13650 PF00462 Glutaredoxin NX08_RS13655 PF02777 Iron/manganese superoxide dismutases, C-terminal domain NX08_RS13655 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain NX08_RS13660 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain NX08_RS13660 PF02222 ATP-grasp domain NX08_RS13665 PF00731 AIR carboxylase NX08_RS13675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain NX08_RS13675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain NX08_RS13685 PF03725 3' exoribonuclease family, domain 2 NX08_RS13685 PF00013 KH domain NX08_RS13685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain NX08_RS13685 PF00575 S1 RNA binding domain NX08_RS13685 PF01138 3' exoribonuclease family, domain 1 NX08_RS13690 PF00312 Ribosomal protein S15 NX08_RS13695 PF09157 Pseudouridine synthase II TruB, C-terminal NX08_RS13695 PF01509 TruB family pseudouridylate synthase (N terminal domain) NX08_RS13695 PF16198 tRNA pseudouridylate synthase B C-terminal domain NX08_RS13700 PF02033 Ribosome-binding factor A NX08_RS13705 PF11987 Translation-initiation factor 2 NX08_RS13705 PF08364 Bacterial translation initiation factor IF-2 associated region NX08_RS13705 PF04760 Translation initiation factor IF-2, N-terminal region NX08_RS13705 PF00009 Elongation factor Tu GTP binding domain NX08_RS13710 PF13184 NusA-like KH domain NX08_RS13710 PF08529 NusA N-terminal domain NX08_RS13710 PF00575 S1 RNA binding domain NX08_RS13715 PF17384 RimP C-terminal SH3 domain NX08_RS13715 PF02576 RimP N-terminal domain NX08_RS13725 PF00361 Proton-conducting membrane transporter NX08_RS13730 PF00361 Proton-conducting membrane transporter NX08_RS13730 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus NX08_RS13735 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus NX08_RS13735 PF00361 Proton-conducting membrane transporter NX08_RS13740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NX08_RS13745 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 NX08_RS13750 PF12838 4Fe-4S dicluster domain NX08_RS13755 PF00146 NADH dehydrogenase NX08_RS13760 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal NX08_RS13760 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region NX08_RS13760 PF00384 Molybdopterin oxidoreductase NX08_RS13765 PF10531 SLBB domain NX08_RS13765 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit NX08_RS13765 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region NX08_RS13775 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NX08_RS13780 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit NX08_RS13785 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit NX08_RS13790 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 NX08_RS13805 PF00121 Triosephosphate isomerase NX08_RS13865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NX08_RS13865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NX08_RS13865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NX08_RS13865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NX08_RS13870 PF01039 Carboxyl transferase domain NX08_RS13870 PF17848 Acetyl-coA carboxylase zinc finger domain NX08_RS13880 PF00290 Tryptophan synthase alpha chain NX08_RS13890 PF00291 Pyridoxal-phosphate dependent enzyme NX08_RS13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS13895 PF03466 LysR substrate binding domain NX08_RS13900 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase NX08_RS13905 PF01416 tRNA pseudouridine synthase NX08_RS13925 PF01118 Semialdehyde dehydrogenase, NAD binding domain NX08_RS13925 PF02774 Semialdehyde dehydrogenase, dimerisation domain NX08_RS13930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NX08_RS13930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain NX08_RS13935 PF01264 Chorismate synthase NX08_RS13940 PF05175 Methyltransferase small domain NX08_RS13945 PF02630 SCO1/SenC NX08_RS13950 PF02666 Phosphatidylserine decarboxylase NX08_RS13955 PF02666 Phosphatidylserine decarboxylase NX08_RS13965 PF05872 Bacterial protein of unknown function (DUF853) NX08_RS13995 PF03449 Transcription elongation factor, N-terminal NX08_RS13995 PF01272 Transcription elongation factor, GreA/GreB, C-term NX08_RS14015 PF00919 Uncharacterized protein family UPF0004 NX08_RS14015 PF04055 Radical SAM superfamily NX08_RS14015 PF18693 TRAM domain NX08_RS14020 PF01738 Dienelactone hydrolase family NX08_RS14050 PF00692 dUTPase NX08_RS14060 PF10609 NUBPL iron-transfer P-loop NTPase NX08_RS14080 PF05649 Peptidase family M13 NX08_RS14080 PF01431 Peptidase family M13 NX08_RS14085 PF05649 Peptidase family M13 NX08_RS14085 PF01431 Peptidase family M13 NX08_RS14105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NX08_RS14105 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS14110 PF01266 FAD dependent oxidoreductase NX08_RS14115 PF04235 Protein of unknown function (DUF418) NX08_RS14120 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase NX08_RS14125 PF00877 NlpC/P60 family NX08_RS14130 PF00877 NlpC/P60 family NX08_RS14140 PF13649 Methyltransferase domain NX08_RS14145 PF00375 Sodium:dicarboxylate symporter family NX08_RS14150 PF00245 Alkaline phosphatase NX08_RS14155 PF11734 TilS substrate C-terminal domain NX08_RS14155 PF09179 TilS substrate binding domain NX08_RS14155 PF01171 PP-loop family NX08_RS14160 PF02609 Exonuclease VII small subunit NX08_RS14165 PF00348 Polyprenyl synthetase NX08_RS14170 PF14521 Lysine-specific metallo-endopeptidase NX08_RS14180 PF01523 Putative modulator of DNA gyrase NX08_RS14185 PF04751 Protein of unknown function (DUF615) NX08_RS14190 PF01523 Putative modulator of DNA gyrase NX08_RS14205 PF13502 AsmA-like C-terminal region NX08_RS14205 PF13116 Protein of unknown function NX08_RS14210 PF00575 S1 RNA binding domain NX08_RS14210 PF10150 Ribonuclease E/G family NX08_RS14215 PF02545 Maf-like protein NX08_RS14220 PF04402 Protein of unknown function (DUF541) NX08_RS14235 PF02590 Predicted SPOUT methyltransferase NX08_RS14255 PF01467 Cytidylyltransferase-like NX08_RS14275 PF13603 Leucyl-tRNA synthetase, Domain 2 NX08_RS14275 PF00133 tRNA synthetases class I (I, L, M and V) NX08_RS14275 PF08264 Anticodon-binding domain of tRNA NX08_RS14285 PF00085 Thioredoxin NX08_RS14300 PF04070 Domain of unknown function (DUF378) NX08_RS14360 PF00005 ABC transporter NX08_RS14360 PF00664 ABC transporter transmembrane region NX08_RS14370 PF00873 AcrB/AcrD/AcrF family NX08_RS14385 PF02321 Outer membrane efflux protein NX08_RS14390 PF00486 Transcriptional regulatory protein, C terminal NX08_RS14390 PF00072 Response regulator receiver domain NX08_RS14395 PF00672 HAMP domain NX08_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS14395 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS14400 PF00999 Sodium/hydrogen exchanger family NX08_RS14405 PF00144 Beta-lactamase NX08_RS14410 PF03737 Aldolase/RraA NX08_RS14440 PF01479 S4 domain NX08_RS14440 PF00849 RNA pseudouridylate synthase NX08_RS14445 PF00563 EAL domain NX08_RS14445 PF08448 PAS fold NX08_RS14445 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS14450 PF00271 Helicase conserved C-terminal domain NX08_RS14450 PF00270 DEAD/DEAH box helicase NX08_RS14450 PF03880 DbpA RNA binding domain NX08_RS14455 PF04539 Sigma-70 region 3 NX08_RS14455 PF04545 Sigma-70, region 4 NX08_RS14455 PF04542 Sigma-70 region 2 NX08_RS14500 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain NX08_RS14500 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain NX08_RS14510 PF00654 Voltage gated chloride channel NX08_RS14515 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS14515 PF00107 Zinc-binding dehydrogenase NX08_RS14530 PF07715 TonB-dependent Receptor Plug Domain NX08_RS14530 PF00593 TonB dependent receptor NX08_RS14540 PF01483 Proprotein convertase P-domain NX08_RS14540 PF00082 Subtilase family NX08_RS14555 PF00248 Aldo/keto reductase family NX08_RS14560 PF07690 Major Facilitator Superfamily NX08_RS14565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS14565 PF03466 LysR substrate binding domain NX08_RS14580 PF06719 AraC-type transcriptional regulator N-terminus NX08_RS14580 PF12833 Helix-turn-helix domain NX08_RS14615 PF00202 Aminotransferase class-III NX08_RS14645 PF02321 Outer membrane efflux protein NX08_RS14650 PF00873 AcrB/AcrD/AcrF family NX08_RS14655 PF00529 HlyD membrane-fusion protein of T1SS NX08_RS14655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS14665 PF01475 Ferric uptake regulator family NX08_RS14670 PF00749 tRNA synthetases class I (E and Q), catalytic domain NX08_RS14680 PF00795 Carbon-nitrogen hydrolase NX08_RS14695 PF06123 Inner membrane protein CreD NX08_RS14705 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS14705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS14705 PF00672 HAMP domain NX08_RS14715 PF00486 Transcriptional regulatory protein, C terminal NX08_RS14715 PF00072 Response regulator receiver domain NX08_RS14720 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ NX08_RS14730 PF17757 UvrB interaction domain NX08_RS14730 PF03461 TRCF domain NX08_RS14730 PF00270 DEAD/DEAH box helicase NX08_RS14730 PF02559 CarD-like/TRCF domain NX08_RS14730 PF00271 Helicase conserved C-terminal domain NX08_RS14760 PF04610 TrbL/VirB6 plasmid conjugal transfer protein NX08_RS14785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS14785 PF01627 Hpt domain NX08_RS14785 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_RS14785 PF01584 CheW-like domain NX08_RS14785 PF09078 CheY binding NX08_RS14790 PF02203 Tar ligand binding domain homologue NX08_RS14790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS14790 PF00672 HAMP domain NX08_RS14795 PF01584 CheW-like domain NX08_RS14800 PF00563 EAL domain NX08_RS14800 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS14800 PF03707 Bacterial signalling protein N terminal repeat NX08_RS14805 PF01739 CheR methyltransferase, SAM binding domain NX08_RS14805 PF03705 CheR methyltransferase, all-alpha domain NX08_RS14810 PF01339 CheB methylesterase NX08_RS14810 PF00072 Response regulator receiver domain NX08_RS14815 PF13091 PLD-like domain NX08_RS14820 PF01431 Peptidase family M13 NX08_RS14820 PF05649 Peptidase family M13 NX08_RS14830 PF00300 Histidine phosphatase superfamily (branch 1) NX08_RS14835 PF04493 Endonuclease V NX08_RS14840 PF05726 Pirin C-terminal cupin domain NX08_RS14840 PF02678 Pirin NX08_RS14860 PF05726 Pirin C-terminal cupin domain NX08_RS14860 PF02678 Pirin NX08_RS14865 PF13722 5TM C-terminal transporter carbon starvation CstA NX08_RS14865 PF02554 Carbon starvation protein CstA NX08_RS14870 PF04328 Selenoprotein, putative NX08_RS14910 PF13478 XdhC Rossmann domain NX08_RS14910 PF02625 XdhC and CoxI family NX08_RS14915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain NX08_RS14915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase NX08_RS14935 PF01799 [2Fe-2S] binding domain NX08_RS14935 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_RS14935 PF10518 TAT (twin-arginine translocation) pathway signal sequence NX08_RS14940 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS14940 PF00107 Zinc-binding dehydrogenase NX08_RS14940 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS14940 PF00550 Phosphopantetheine attachment site NX08_RS14940 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS14940 PF08659 KR domain NX08_RS14940 PF16197 Ketoacyl-synthetase C-terminal extension NX08_RS14940 PF14765 Polyketide synthase dehydratase NX08_RS14940 PF00698 Acyl transferase domain NX08_RS14945 PF00360 Phytochrome region NX08_RS14945 PF00563 EAL domain NX08_RS14945 PF01590 GAF domain NX08_RS14945 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS14950 PF00436 Single-strand binding protein family NX08_RS14955 PF00348 Polyprenyl synthetase NX08_RS14965 PF08245 Mur ligase middle domain NX08_RS14980 PF01842 ACT domain NX08_RS14980 PF00696 Amino acid kinase family NX08_RS14985 PF02567 Phenazine biosynthesis-like protein NX08_RS14990 PF02567 Phenazine biosynthesis-like protein NX08_RS15000 PF02566 OsmC-like protein NX08_RS15015 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain NX08_RS15015 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain NX08_RS15020 PF03652 Holliday junction resolvase NX08_RS15025 PF02622 Uncharacterized ACR, COG1678 NX08_RS15030 PF13673 Acetyltransferase (GNAT) domain NX08_RS15030 PF03352 Methyladenine glycosylase NX08_RS15030 PF13302 Acetyltransferase (GNAT) domain NX08_RS15030 PF00958 GMP synthase C terminal domain NX08_RS15030 PF00117 Glutamine amidotransferase class-I NX08_RS15055 PF00437 Type II/IV secretion system protein NX08_RS15060 PF00437 Type II/IV secretion system protein NX08_RS15065 PF01168 Alanine racemase, N-terminal domain NX08_RS15070 PF03807 NADP oxidoreductase coenzyme F420-dependent NX08_RS15070 PF14748 Pyrroline-5-carboxylate reductase dimerisation NX08_RS15080 PF01476 LysM domain NX08_RS15080 PF01551 Peptidase family M23 NX08_RS15100 PF01965 DJ-1/PfpI family NX08_RS15110 PF02082 Transcriptional regulator NX08_RS15115 PF01458 Uncharacterized protein family (UPF0051) NX08_RS15120 PF00005 ABC transporter NX08_RS15125 PF01458 Uncharacterized protein family (UPF0051) NX08_RS15130 PF00266 Aminotransferase class-V NX08_RS15145 PF00355 Rieske [2Fe-2S] domain NX08_RS15150 PF07715 TonB-dependent Receptor Plug Domain NX08_RS15150 PF00593 TonB dependent receptor NX08_RS15155 PF18331 PKHD-type hydroxylase C-terminal domain NX08_RS15155 PF13640 2OG-Fe(II) oxygenase superfamily NX08_RS15180 PF02424 ApbE family NX08_RS15185 PF00175 Oxidoreductase NAD-binding domain NX08_RS15185 PF00258 Flavodoxin NX08_RS15185 PF00667 FAD binding domain NX08_RS15190 PF05962 HutD NX08_RS15200 PF07687 Peptidase dimerisation domain NX08_RS15200 PF01546 Peptidase family M20/M25/M40 NX08_RS15210 PF01636 Phosphotransferase enzyme family NX08_RS15215 PF00483 Nucleotidyl transferase NX08_RS15225 PF00308 Bacterial dnaA protein NX08_RS15230 PF01594 AI-2E family transporter NX08_RS15240 PF00586 AIR synthase related protein, N-terminal domain NX08_RS15240 PF02769 AIR synthase related protein, C-terminal domain NX08_RS15250 PF00551 Formyl transferase NX08_RS15275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) NX08_RS15280 PF01722 BolA-like protein NX08_RS15285 PF00571 CBS domain NX08_RS15285 PF01380 SIS domain NX08_RS15300 PF03968 OstA-like protein NX08_RS15305 PF00005 ABC transporter NX08_RS15310 PF04963 Sigma-54 factor, core binding domain NX08_RS15310 PF00309 Sigma-54 factor, Activator interacting domain (AID) NX08_RS15310 PF04552 Sigma-54, DNA binding domain NX08_RS15315 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein NX08_RS15320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 NX08_RS15325 PF07475 HPr Serine kinase C-terminal domain NX08_RS15325 PF02603 HPr Serine kinase N terminus NX08_RS15330 PF03668 P-loop ATPase protein family NX08_RS15340 PF00381 PTS HPr component phosphorylation site NX08_RS15345 PF05524 PEP-utilising enzyme, N-terminal NX08_RS15345 PF00391 PEP-utilising enzyme, mobile domain NX08_RS15345 PF02896 PEP-utilising enzyme, TIM barrel domain NX08_RS15355 PF00571 CBS domain NX08_RS15355 PF01769 Divalent cation transporter NX08_RS15355 PF03448 MgtE intracellular N domain NX08_RS15360 PF00756 Putative esterase NX08_RS15370 PF02322 Cytochrome bd terminal oxidase subunit II NX08_RS15375 PF01654 Cytochrome bd terminal oxidase subunit I NX08_RS15385 PF00324 Amino acid permease NX08_RS15405 PF00561 alpha/beta hydrolase fold NX08_RS15410 PF00196 Bacterial regulatory proteins, luxR family NX08_RS15415 PF00324 Amino acid permease NX08_RS15420 PF00239 Resolvase, N terminal domain NX08_RS15420 PF02796 Helix-turn-helix domain of resolvase NX08_RS15425 PF15457 Type III T3SS secreted effector HopW1-1/HopPmaA NX08_RS15430 PF09722 Protein of unknown function (DUF2384) NX08_RS15430 PF01936 NYN domain NX08_RS15445 PF12706 Beta-lactamase superfamily domain NX08_RS15450 PF04820 Tryptophan halogenase NX08_RS15475 PF00376 MerR family regulatory protein NX08_RS15475 PF09278 MerR, DNA binding NX08_RS15480 PF07690 Major Facilitator Superfamily NX08_RS15490 PF03738 Glutathionylspermidine synthase preATP-grasp NX08_RS15515 PF04012 PspA/IM30 family NX08_RS15525 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region NX08_RS15525 PF01243 Pyridoxamine 5'-phosphate oxidase NX08_RS15530 PF01202 Shikimate kinase NX08_RS15535 PF01761 3-dehydroquinate synthase NX08_RS15550 PF01208 Uroporphyrinogen decarboxylase (URO-D) NX08_RS15560 PF17149 Periplasmic sensor domain found in signal transduction proteins NX08_RS15560 PF00672 HAMP domain NX08_RS15560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS15560 PF00072 Response regulator receiver domain NX08_RS15560 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS15560 PF01627 Hpt domain NX08_RS15565 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS15565 PF01627 Hpt domain NX08_RS15565 PF00072 Response regulator receiver domain NX08_RS15565 PF17149 Periplasmic sensor domain found in signal transduction proteins NX08_RS15565 PF00672 HAMP domain NX08_RS15565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS15580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS15580 PF00072 Response regulator receiver domain NX08_RS15580 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS15580 PF09308 LuxQ, periplasmic NX08_RS15590 PF04264 YceI-like domain NX08_RS15620 PF03315 Serine dehydratase beta chain NX08_RS15620 PF03313 Serine dehydratase alpha chain NX08_RS15625 PF12697 Alpha/beta hydrolase family NX08_RS15630 PF00742 Homoserine dehydrogenase NX08_RS15630 PF00696 Amino acid kinase family NX08_RS15630 PF03447 Homoserine dehydrogenase, NAD binding domain NX08_RS15635 PF01053 Cys/Met metabolism PLP-dependent enzyme NX08_RS15640 PF00561 alpha/beta hydrolase fold NX08_RS15645 PF01551 Peptidase family M23 NX08_RS15650 PF16658 Class II release factor RF3, C-terminal domain NX08_RS15650 PF00009 Elongation factor Tu GTP binding domain NX08_RS15655 PF03006 Haemolysin-III related NX08_RS15660 PF05170 AsmA family NX08_RS15670 PF00535 Glycosyl transferase family 2 NX08_RS15675 PF00912 Transglycosylase NX08_RS15680 PF01430 Hsp33 protein NX08_RS15690 PF07715 TonB-dependent Receptor Plug Domain NX08_RS15690 PF00593 TonB dependent receptor NX08_RS15695 PF00440 Bacterial regulatory proteins, tetR family NX08_RS15700 PF00561 alpha/beta hydrolase fold NX08_RS15705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain NX08_RS15705 PF02770 Acyl-CoA dehydrogenase, middle domain NX08_RS15705 PF09317 Domain of unknown function (DUF1974) NX08_RS15705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain NX08_RS15740 PF01597 Glycine cleavage H-protein NX08_RS15745 PF08669 Glycine cleavage T-protein C-terminal barrel domain NX08_RS15745 PF01571 Aminomethyltransferase folate-binding domain NX08_RS15760 PF02694 Uncharacterised BCR, YnfA/UPF0060 family NX08_RS15765 PF03819 MazG nucleotide pyrophosphohydrolase domain NX08_RS15770 PF00459 Inositol monophosphatase family NX08_RS15775 PF00293 NUDIX domain NX08_RS15780 PF00202 Aminotransferase class-III NX08_RS15785 PF04452 RNA methyltransferase NX08_RS15790 PF02685 Glucokinase NX08_RS15805 PF01476 LysM domain NX08_RS15805 PF00704 Glycosyl hydrolases family 18 NX08_RS15840 PF07691 PA14 domain NX08_RS15840 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_RS15840 PF14310 Fibronectin type III-like domain NX08_RS15840 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_RS15845 PF03412 Peptidase C39 family NX08_RS15845 PF00664 ABC transporter transmembrane region NX08_RS15845 PF00005 ABC transporter NX08_RS15900 PF17678 Glycosyl hydrolase family 92 N-terminal domain NX08_RS15900 PF07971 Glycosyl hydrolase family 92 NX08_RS15905 PF01301 Glycosyl hydrolases family 35 NX08_RS15950 PF03932 CutC family NX08_RS15955 PF01112 Asparaginase NX08_RS15970 PF13302 Acetyltransferase (GNAT) domain NX08_RS15985 PF00072 Response regulator receiver domain NX08_RS15985 PF01339 CheB methylesterase NX08_RS15990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS15990 PF01627 Hpt domain NX08_RS15990 PF00072 Response regulator receiver domain NX08_RS15990 PF02895 Signal transducing histidine kinase, homodimeric domain NX08_RS15990 PF01584 CheW-like domain NX08_RS15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS15995 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term NX08_RS16000 PF01584 CheW-like domain NX08_RS16005 PF00072 Response regulator receiver domain NX08_RS16010 PF00072 Response regulator receiver domain NX08_RS16015 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain NX08_RS16015 PF02951 Prokaryotic glutathione synthetase, N-terminal domain NX08_RS16025 PF03747 ADP-ribosylglycohydrolase NX08_RS16030 PF00814 Glycoprotease family NX08_RS16035 PF13307 Helicase C-terminal domain NX08_RS16035 PF04851 Type III restriction enzyme, res subunit NX08_RS16045 PF14814 Bifunctional transglycosylase second domain NX08_RS16045 PF00905 Penicillin binding protein transpeptidase domain NX08_RS16045 PF00912 Transglycosylase NX08_RS16055 PF00535 Glycosyl transferase family 2 NX08_RS16070 PF02824 TGS domain NX08_RS16070 PF04607 Region found in RelA / SpoT proteins NX08_RS16070 PF13291 ACT domain NX08_RS16075 PF08042 PqqA family NX08_RS16080 PF12706 Beta-lactamase superfamily domain NX08_RS16085 PF03070 TENA/THI-4/PQQC family NX08_RS16090 PF05402 Coenzyme PQQ synthesis protein D (PqqD) NX08_RS16095 PF13186 Iron-sulfur cluster-binding domain NX08_RS16095 PF04055 Radical SAM superfamily NX08_RS16115 PF02685 Glucokinase NX08_RS16130 PF00271 Helicase conserved C-terminal domain NX08_RS16130 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold NX08_RS16130 PF04408 Helicase associated domain (HA2) NX08_RS16130 PF11898 Domain of unknown function (DUF3418) NX08_RS16130 PF00270 DEAD/DEAH box helicase NX08_RS16135 PF00210 Ferritin-like domain NX08_RS16145 PF09382 RQC domain NX08_RS16145 PF16124 RecQ zinc-binding NX08_RS16145 PF00570 HRDC domain NX08_RS16145 PF00271 Helicase conserved C-terminal domain NX08_RS16145 PF00270 DEAD/DEAH box helicase NX08_RS16180 PF00849 RNA pseudouridylate synthase NX08_RS16180 PF01479 S4 domain NX08_RS16210 PF06508 Queuosine biosynthesis protein QueC NX08_RS16390 PF03421 YopJ Serine/Threonine acetyltransferase NX08_RS16465 PF01555 DNA methylase NX08_RS16500 PF04055 Radical SAM superfamily NX08_RS16510 PF00691 OmpA family NX08_RS16515 PF07676 WD40-like Beta Propeller Repeat NX08_RS16515 PF04052 TolB amino-terminal domain NX08_RS16525 PF02472 Biopolymer transport protein ExbD/TolR NX08_RS16530 PF01618 MotA/TolQ/ExbB proton channel family NX08_RS16535 PF03061 Thioesterase superfamily NX08_RS16540 PF05496 Holliday junction DNA helicase RuvB P-loop domain NX08_RS16540 PF05491 RuvB C-terminal winged helix domain NX08_RS16540 PF17864 RuvB AAA lid domain NX08_RS16545 PF02705 K+ potassium transporter NX08_RS16550 PF07499 RuvA, C-terminal domain NX08_RS16550 PF01330 RuvA N terminal domain NX08_RS16555 PF02075 Crossover junction endodeoxyribonuclease RuvC NX08_RS16560 PF01709 Transcriptional regulator NX08_RS16575 PF00152 tRNA synthetases class II (D, K and N) NX08_RS16575 PF02938 GAD domain NX08_RS16575 PF01336 OB-fold nucleic acid binding domain NX08_RS16595 PF07690 Major Facilitator Superfamily NX08_RS16625 PF00266 Aminotransferase class-V NX08_RS16630 PF01053 Cys/Met metabolism PLP-dependent enzyme NX08_RS16640 PF07722 Peptidase C26 NX08_RS16645 PF01810 LysE type translocator NX08_RS16650 PF04204 Homoserine O-succinyltransferase NX08_RS16655 PF00120 Glutamine synthetase, catalytic domain NX08_RS16680 PF05506 Domain of unknown function (DUF756) NX08_RS16680 PF04185 Phosphoesterase family NX08_RS16700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS16700 PF03466 LysR substrate binding domain NX08_RS16710 PF00005 ABC transporter NX08_RS16710 PF12848 ABC transporter NX08_RS16715 PF00593 TonB dependent receptor NX08_RS16715 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16730 PF00593 TonB dependent receptor NX08_RS16730 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16735 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16735 PF00593 TonB dependent receptor NX08_RS16750 PF02254 TrkA-N domain NX08_RS16750 PF00999 Sodium/hydrogen exchanger family NX08_RS16760 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16760 PF07660 Secretin and TonB N terminus short domain NX08_RS16760 PF00593 TonB dependent receptor NX08_RS16770 PF06276 Ferric iron reductase FhuF-like transporter NX08_RS16770 PF04183 IucA / IucC family NX08_RS16775 PF07690 Major Facilitator Superfamily NX08_RS16780 PF06276 Ferric iron reductase FhuF-like transporter NX08_RS16780 PF04183 IucA / IucC family NX08_RS16785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NX08_RS16785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain NX08_RS16805 PF00593 TonB dependent receptor NX08_RS16805 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16825 PF10431 C-terminal, D2-small domain, of ClpB protein NX08_RS16825 PF17871 AAA lid domain NX08_RS16825 PF00004 ATPase family associated with various cellular activities (AAA) NX08_RS16825 PF02861 Clp amino terminal domain, pathogenicity island component NX08_RS16825 PF07724 AAA domain (Cdc48 subfamily) NX08_RS16830 PF00005 ABC transporter NX08_RS16835 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS16840 PF09084 NMT1/THI5 like NX08_RS16850 PF00296 Luciferase-like monooxygenase NX08_RS16855 PF00593 TonB dependent receptor NX08_RS16855 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16860 PF01541 GIY-YIG catalytic domain NX08_RS16900 PF07715 TonB-dependent Receptor Plug Domain NX08_RS16900 PF00593 TonB dependent receptor NX08_RS16910 PF02358 Trehalose-phosphatase NX08_RS16915 PF00723 Glycosyl hydrolases family 15 NX08_RS16920 PF00982 Glycosyltransferase family 20 NX08_RS16925 PF01011 PQQ enzyme repeat NX08_RS16930 PF00672 HAMP domain NX08_RS16930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS16930 PF02203 Tar ligand binding domain homologue NX08_RS16935 PF04134 Protein of unknown function, DUF393 NX08_RS16945 PF02578 Multi-copper polyphenol oxidoreductase laccase NX08_RS16950 PF00849 RNA pseudouridylate synthase NX08_RS16955 PF13525 Outer membrane lipoprotein NX08_RS16960 PF00795 Carbon-nitrogen hydrolase NX08_RS16960 PF02540 NAD synthase NX08_RS16975 PF02629 CoA binding domain NX08_RS16975 PF00549 CoA-ligase NX08_RS16980 PF00549 CoA-ligase NX08_RS16980 PF08442 ATP-grasp domain NX08_RS16985 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS16985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS16990 PF00158 Sigma-54 interaction domain NX08_RS16990 PF02954 Bacterial regulatory protein, Fis family NX08_RS16990 PF00072 Response regulator receiver domain NX08_RS16995 PF00437 Type II/IV secretion system protein NX08_RS16995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NX08_RS17000 PF00114 Pilin (bacterial filament) NX08_RS17000 PF07963 Prokaryotic N-terminal methylation motif NX08_RS17005 PF00114 Pilin (bacterial filament) NX08_RS17005 PF07963 Prokaryotic N-terminal methylation motif NX08_RS17010 PF00482 Type II secretion system (T2SS), protein F NX08_RS17015 PF01478 Type IV leader peptidase family NX08_RS17015 PF06750 Bacterial Peptidase A24 N-terminal domain NX08_RS17020 PF01121 Dephospho-CoA kinase NX08_RS17025 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS17025 PF00989 PAS fold NX08_RS17025 PF11808 Phosphate regulon sensor protein PhoR NX08_RS17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS17030 PF00072 Response regulator receiver domain NX08_RS17030 PF00486 Transcriptional regulatory protein, C terminal NX08_RS17040 PF08443 RimK-like ATP-grasp domain NX08_RS17040 PF18030 RimK PreATP-grasp domain NX08_RS17045 PF00128 Alpha amylase, catalytic domain NX08_RS17045 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) NX08_RS17200 PF00092 von Willebrand factor type A domain NX08_RS17220 PF05593 RHS Repeat NX08_RS17220 PF03527 RHS protein NX08_RS17255 PF03797 Autotransporter beta-domain NX08_RS17255 PF00657 GDSL-like Lipase/Acylhydrolase NX08_RS17265 PF05690 Thiazole biosynthesis protein ThiG NX08_RS17270 PF02390 Putative methyltransferase NX08_RS17275 PF03600 Citrate transporter NX08_RS17275 PF02080 TrkA-C domain NX08_RS17290 PF01557 Fumarylacetoacetate (FAA) hydrolase family NX08_RS17295 PF01741 Large-conductance mechanosensitive channel, MscL NX08_RS17305 PF00356 Bacterial regulatory proteins, lacI family NX08_RS17340 PF14508 Glycosyl-hydrolase 97 N-terminal NX08_RS17340 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation NX08_RS17340 PF10566 Glycoside hydrolase 97 NX08_RS17350 PF00135 Carboxylesterase family NX08_RS17355 PF00588 SpoU rRNA Methylase family NX08_RS17355 PF08032 RNA 2'-O ribose methyltransferase substrate binding NX08_RS17370 PF00873 AcrB/AcrD/AcrF family NX08_RS17375 PF00529 HlyD membrane-fusion protein of T1SS NX08_RS17375 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS17380 PF00009 Elongation factor Tu GTP binding domain NX08_RS17385 PF01507 Phosphoadenosine phosphosulfate reductase family NX08_RS17390 PF00258 Flavodoxin NX08_RS17390 PF00667 FAD binding domain NX08_RS17390 PF00175 Oxidoreductase NAD-binding domain NX08_RS17395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain NX08_RS17395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain NX08_RS17400 PF01507 Phosphoadenosine phosphosulfate reductase family NX08_RS17420 PF00672 HAMP domain NX08_RS17420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS17420 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS17420 PF00072 Response regulator receiver domain NX08_RS17420 PF01627 Hpt domain NX08_RS17435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS17435 PF03466 LysR substrate binding domain NX08_RS17440 PF14824 Sirohaem biosynthesis protein central NX08_RS17440 PF10414 Sirohaem synthase dimerisation region NX08_RS17440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases NX08_RS17445 PF00291 Pyridoxal-phosphate dependent enzyme NX08_RS17455 PF01661 Macro domain NX08_RS17460 PF00274 Fructose-bisphosphate aldolase class-I NX08_RS17470 PF02887 Pyruvate kinase, alpha/beta domain NX08_RS17470 PF00224 Pyruvate kinase, barrel domain NX08_RS17475 PF13419 Haloacid dehalogenase-like hydrolase NX08_RS17480 PF00162 Phosphoglycerate kinase NX08_RS17505 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain NX08_RS17505 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain NX08_RS17525 PF03922 OmpW family NX08_RS17535 PF00753 Metallo-beta-lactamase superfamily NX08_RS17535 PF04273 Putative phosphatase (DUF442) NX08_RS17545 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS17550 PF03459 TOBE domain NX08_RS17550 PF00005 ABC transporter NX08_RS17570 PF01476 LysM domain NX08_RS17570 PF03734 L,D-transpeptidase catalytic domain NX08_RS17575 PF04225 Opacity-associated protein A LysM-like domain NX08_RS17575 PF01551 Peptidase family M23 NX08_RS17585 PF03466 LysR substrate binding domain NX08_RS17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS17590 PF00593 TonB dependent receptor NX08_RS17590 PF07715 TonB-dependent Receptor Plug Domain NX08_RS17605 PF02780 Transketolase, C-terminal domain NX08_RS17605 PF02779 Transketolase, pyrimidine binding domain NX08_RS17605 PF00456 Transketolase, thiamine diphosphate binding domain NX08_RS17610 PF00375 Sodium:dicarboxylate symporter family NX08_RS17625 PF07584 Aerotolerance regulator N-terminal NX08_RS17625 PF00092 von Willebrand factor type A domain NX08_RS17645 PF07726 ATPase family associated with various cellular activities (AAA) NX08_RS17645 PF17863 AAA lid domain NX08_RS17650 PF11741 AMIN domain NX08_RS17650 PF03958 Bacterial type II/III secretion system short domain NX08_RS17650 PF07660 Secretin and TonB N terminus short domain NX08_RS17650 PF00263 Bacterial type II and III secretion system protein NX08_RS17655 PF04351 Pilus assembly protein, PilP NX08_RS17660 PF04350 Pilus assembly protein, PilO NX08_RS17665 PF05137 Fimbrial assembly protein (PilN) NX08_RS17670 PF11104 Type IV pilus assembly protein PilM; NX08_RS17675 PF00912 Transglycosylase NX08_RS17675 PF17092 Penicillin-binding protein OB-like domain NX08_RS17675 PF00905 Penicillin binding protein transpeptidase domain NX08_RS17685 PF00285 Citrate synthase, C-terminal domain NX08_RS17690 PF01197 Ribosomal protein L31 NX08_RS17695 PF01156 Inosine-uridine preferring nucleoside hydrolase NX08_RS17700 PF00271 Helicase conserved C-terminal domain NX08_RS17700 PF00270 DEAD/DEAH box helicase NX08_RS17700 PF17191 RecG wedge domain NX08_RS17705 PF01042 Endoribonuclease L-PSP NX08_RS17710 PF04607 Region found in RelA / SpoT proteins NX08_RS17710 PF13291 ACT domain NX08_RS17710 PF02824 TGS domain NX08_RS17715 PF01192 RNA polymerase Rpb6 NX08_RS17725 PF00625 Guanylate kinase NX08_RS17730 PF08340 Domain of unknown function (DUF1732) NX08_RS17730 PF03755 YicC-like family, N-terminal region NX08_RS17735 PF01138 3' exoribonuclease family, domain 1 NX08_RS17735 PF03725 3' exoribonuclease family, domain 2 NX08_RS17745 PF01725 Ham1 family NX08_RS17750 PF06969 HemN C-terminal domain NX08_RS17750 PF04055 Radical SAM superfamily NX08_RS17765 PF00557 Metallopeptidase family M24 NX08_RS17775 PF05195 Aminopeptidase P, N-terminal domain NX08_RS17775 PF00557 Metallopeptidase family M24 NX08_RS17780 PF03695 Uncharacterised protein family (UPF0149) NX08_RS17790 PF05164 Cell division protein ZapA NX08_RS17800 PF01812 5-formyltetrahydrofolate cyclo-ligase family NX08_RS17810 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) NX08_RS17820 PF13369 Transglutaminase-like superfamily NX08_RS17825 PF00301 Rubredoxin NX08_RS17830 PF02581 Thiamine monophosphate synthase NX08_RS17850 PF00202 Aminotransferase class-III NX08_RS17855 PF00196 Bacterial regulatory proteins, luxR family NX08_RS17855 PF17874 MalT-like TPR region NX08_RS17860 PF00127 Copper binding proteins, plastocyanin/azurin family NX08_RS17865 PF00155 Aminotransferase class I and II NX08_RS17875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III NX08_RS17875 PF00034 Cytochrome c NX08_RS17880 PF01593 Flavin containing amine oxidoreductase NX08_RS17895 PF00202 Aminotransferase class-III NX08_RS17900 PF00520 Ion transport protein NX08_RS17900 PF00027 Cyclic nucleotide-binding domain NX08_RS17920 PF01569 PAP2 superfamily NX08_RS17925 PF01062 Bestrophin, RFP-TM, chloride channel NX08_RS17935 PF01225 Mur ligase family, catalytic domain NX08_RS17935 PF02875 Mur ligase family, glutamate ligase domain NX08_RS17935 PF08245 Mur ligase middle domain NX08_RS17945 PF00365 Phosphofructokinase NX08_RS17955 PF03030 Inorganic H+ pyrophosphatase NX08_RS17965 PF00719 Inorganic pyrophosphatase NX08_RS17975 PF00593 TonB dependent receptor NX08_RS17975 PF07715 TonB-dependent Receptor Plug Domain NX08_RS17980 PF12833 Helix-turn-helix domain NX08_RS17985 PF00486 Transcriptional regulatory protein, C terminal NX08_RS17985 PF18500 CadC C-terminal domain 1 NX08_RS17990 PF13667 ThiC-associated domain NX08_RS17990 PF01964 Radical SAM ThiC family NX08_RS18005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain NX08_RS18005 PF00672 HAMP domain NX08_RS18015 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain NX08_RS18015 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain NX08_RS18020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain NX08_RS18020 PF00205 Thiamine pyrophosphate enzyme, central domain NX08_RS18020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain NX08_RS18030 PF00291 Pyridoxal-phosphate dependent enzyme NX08_RS18035 PF00682 HMGL-like NX08_RS18035 PF08502 LeuA allosteric (dimerisation) domain NX08_RS18040 PF00180 Isocitrate/isopropylmalate dehydrogenase NX08_RS18045 PF08241 Methyltransferase domain NX08_RS18050 PF00694 Aconitase C-terminal domain NX08_RS18060 PF00330 Aconitase family (aconitate hydratase) NX08_RS18065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS18075 PF00990 Diguanylate cyclase, GGDEF domain NX08_RS18090 PF02321 Outer membrane efflux protein NX08_RS18095 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) NX08_RS18100 PF03279 Bacterial lipid A biosynthesis acyltransferase NX08_RS18130 PF00390 Malic enzyme, N-terminal domain NX08_RS18130 PF01515 Phosphate acetyl/butaryl transferase NX08_RS18130 PF03949 Malic enzyme, NAD binding domain NX08_RS18135 PF00375 Sodium:dicarboxylate symporter family NX08_RS18150 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS18150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS18155 PF07690 Major Facilitator Superfamily NX08_RS18165 PF03466 LysR substrate binding domain NX08_RS18165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS18170 PF00248 Aldo/keto reductase family NX08_RS18185 PF00196 Bacterial regulatory proteins, luxR family NX08_RS18185 PF00072 Response regulator receiver domain NX08_RS18195 PF08521 Two-component sensor kinase N-terminal NX08_RS18195 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS18200 PF00072 Response regulator receiver domain NX08_RS18200 PF00486 Transcriptional regulatory protein, C terminal NX08_RS18220 PF03600 Citrate transporter NX08_RS18225 PF00106 short chain dehydrogenase NX08_RS18230 PF00356 Bacterial regulatory proteins, lacI family NX08_RS18245 PF00128 Alpha amylase, catalytic domain NX08_RS18260 PF03193 RsgA GTPase NX08_RS18265 PF00155 Aminotransferase class I and II NX08_RS18285 PF01522 Polysaccharide deacetylase NX08_RS18290 PF00462 Glutaredoxin NX08_RS18305 PF01979 Amidohydrolase family NX08_RS18310 PF01979 Amidohydrolase family NX08_RS18360 PF00756 Putative esterase NX08_RS18365 PF04828 Glutathione-dependent formaldehyde-activating enzyme NX08_RS18370 PF00107 Zinc-binding dehydrogenase NX08_RS18370 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS18375 PF02583 Metal-sensitive transcriptional repressor NX08_RS18385 PF00486 Transcriptional regulatory protein, C terminal NX08_RS18385 PF00072 Response regulator receiver domain NX08_RS18390 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS18390 PF00672 HAMP domain NX08_RS18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS18410 PF04107 Glutamate-cysteine ligase family 2(GCS2) NX08_RS18420 PF01926 50S ribosome-binding GTPase NX08_RS18425 PF00034 Cytochrome c NX08_RS18435 PF01323 DSBA-like thioredoxin domain NX08_RS18465 PF05199 GMC oxidoreductase NX08_RS18465 PF00732 GMC oxidoreductase NX08_RS18470 PF00583 Acetyltransferase (GNAT) family NX08_RS18480 PF01066 CDP-alcohol phosphatidyltransferase NX08_RS18490 PF04073 Aminoacyl-tRNA editing domain NX08_RS18490 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) NX08_RS18490 PF03129 Anticodon binding domain NX08_RS18495 PF00816 H-NS histone family NX08_RS18505 PF02405 Permease MlaE NX08_RS18510 PF00005 ABC transporter NX08_RS18515 PF02470 MlaD protein NX08_RS18515 PF03886 ABC-type transport auxiliary lipoprotein component NX08_RS18540 PF05045 Rhamnan synthesis protein F NX08_RS18540 PF14307 Glycosyltransferase WbsX NX08_RS18545 PF01144 Coenzyme A transferase NX08_RS18550 PF01144 Coenzyme A transferase NX08_RS18555 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NX08_RS18555 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NX08_RS18555 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NX08_RS18555 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NX08_RS18560 PF01050 Mannose-6-phosphate isomerase NX08_RS18560 PF00483 Nucleotidyl transferase NX08_RS18565 PF04321 RmlD substrate binding domain NX08_RS18570 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase NX08_RS18575 PF00483 Nucleotidyl transferase NX08_RS18580 PF16363 GDP-mannose 4,6 dehydratase NX08_RS18585 PF01012 Electron transfer flavoprotein domain NX08_RS18590 PF00766 Electron transfer flavoprotein FAD-binding domain NX08_RS18590 PF01012 Electron transfer flavoprotein domain NX08_RS18600 PF01040 UbiA prenyltransferase family NX08_RS18605 PF04030 D-arabinono-1,4-lactone oxidase NX08_RS18605 PF01565 FAD binding domain NX08_RS18610 PF00106 short chain dehydrogenase NX08_RS18615 PF01370 NAD dependent epimerase/dehydratase family NX08_RS18620 PF01593 Flavin containing amine oxidoreductase NX08_RS18645 PF13439 Glycosyltransferase Family 4 NX08_RS18645 PF00534 Glycosyl transferases group 1 NX08_RS18650 PF16363 GDP-mannose 4,6 dehydratase NX08_RS18655 PF16363 GDP-mannose 4,6 dehydratase NX08_RS18665 PF00005 ABC transporter NX08_RS18680 PF01053 Cys/Met metabolism PLP-dependent enzyme NX08_RS18685 PF00291 Pyridoxal-phosphate dependent enzyme NX08_RS18685 PF00571 CBS domain NX08_RS18705 PF00437 Type II/IV secretion system protein NX08_RS18710 PF02798 Glutathione S-transferase, N-terminal domain NX08_RS18710 PF14497 Glutathione S-transferase, C-terminal domain NX08_RS18725 PF00270 DEAD/DEAH box helicase NX08_RS18725 PF00271 Helicase conserved C-terminal domain NX08_RS18735 PF01242 6-pyruvoyl tetrahydropterin synthase NX08_RS18750 PF13185 GAF domain NX08_RS18760 PF13419 Haloacid dehalogenase-like hydrolase NX08_RS18765 PF11799 impB/mucB/samB family C-terminal domain NX08_RS18765 PF00817 impB/mucB/samB family NX08_RS18770 PF07977 FabA-like domain NX08_RS18775 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS18775 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS18790 PF01432 Peptidase family M3 NX08_RS18805 PF07731 Multicopper oxidase NX08_RS18805 PF00394 Multicopper oxidase NX08_RS18805 PF07732 Multicopper oxidase NX08_RS18810 PF05275 Copper resistance protein B precursor (CopB) NX08_RS18815 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily NX08_RS18840 PF01380 SIS domain NX08_RS18845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS18850 PF00005 ABC transporter NX08_RS18855 PF12704 MacB-like periplasmic core domain NX08_RS18855 PF02687 FtsX-like permease family NX08_RS18860 PF12704 MacB-like periplasmic core domain NX08_RS18860 PF02687 FtsX-like permease family NX08_RS18865 PF02954 Bacterial regulatory protein, Fis family NX08_RS18865 PF00072 Response regulator receiver domain NX08_RS18865 PF00158 Sigma-54 interaction domain NX08_RS18870 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS18870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS18875 PF00132 Bacterial transferase hexapeptide (six repeats) NX08_RS18875 PF14602 Hexapeptide repeat of succinyl-transferase NX08_RS18875 PF12804 MobA-like NTP transferase domain NX08_RS18905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain NX08_RS18910 PF02874 ATP synthase alpha/beta family, beta-barrel domain NX08_RS18910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_RS18915 PF00231 ATP synthase NX08_RS18920 PF00306 ATP synthase alpha/beta chain, C terminal domain NX08_RS18920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_RS18920 PF02874 ATP synthase alpha/beta family, beta-barrel domain NX08_RS18925 PF00213 ATP synthase delta (OSCP) subunit NX08_RS18930 PF00430 ATP synthase B/B' CF(0) NX08_RS18935 PF00137 ATP synthase subunit C NX08_RS18940 PF00119 ATP synthase A chain NX08_RS18960 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain NX08_RS18960 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS18970 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) NX08_RS18970 PF00364 Biotin-requiring enzyme NX08_RS18970 PF02817 e3 binding domain NX08_RS19010 PF03180 NLPA lipoprotein NX08_RS19015 PF00528 Binding-protein-dependent transport system inner membrane component NX08_RS19020 PF00005 ABC transporter NX08_RS19020 PF09383 NIL domain NX08_RS19025 PF00892 EamA-like transporter family NX08_RS19030 PF04461 Protein of unknown function (DUF520) NX08_RS19070 PF00849 RNA pseudouridylate synthase NX08_RS19070 PF01479 S4 domain NX08_RS19075 PF05175 Methyltransferase small domain NX08_RS19075 PF08468 Methyltransferase small domain N-terminal NX08_RS19090 PF07995 Glucose / Sorbosone dehydrogenase NX08_RS19105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS19105 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS19105 PF00989 PAS fold NX08_RS19125 PF00842 Alanine racemase, C-terminal domain NX08_RS19125 PF01168 Alanine racemase, N-terminal domain NX08_RS19130 PF01266 FAD dependent oxidoreductase NX08_RS19135 PF01037 Lrp/AsnC ligand binding domain NX08_RS19145 PF01641 SelR domain NX08_RS19155 PF01618 MotA/TolQ/ExbB proton channel family NX08_RS19160 PF13677 Membrane MotB of proton-channel complex MotA/MotB NX08_RS19160 PF00691 OmpA family NX08_RS19175 PF00072 Response regulator receiver domain NX08_RS19175 PF00486 Transcriptional regulatory protein, C terminal NX08_RS19180 PF13188 PAS domain NX08_RS19180 PF00072 Response regulator receiver domain NX08_RS19180 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS19180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS19180 PF08448 PAS fold NX08_RS19190 PF00082 Subtilase family NX08_RS19190 PF04151 Bacterial pre-peptidase C-terminal domain NX08_RS19195 PF04151 Bacterial pre-peptidase C-terminal domain NX08_RS19195 PF09286 Pro-kumamolisin, activation domain NX08_RS19215 PF01061 ABC-2 type transporter NX08_RS19220 PF00005 ABC transporter NX08_RS19225 PF00999 Sodium/hydrogen exchanger family NX08_RS19235 PF02469 Fasciclin domain NX08_RS19240 PF03167 Uracil DNA glycosylase superfamily NX08_RS19265 PF03466 LysR substrate binding domain NX08_RS19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS19270 PF03358 NADPH-dependent FMN reductase NX08_RS19275 PF00248 Aldo/keto reductase family NX08_RS19285 PF01431 Peptidase family M13 NX08_RS19285 PF05649 Peptidase family M13 NX08_RS19300 PF13520 Amino acid permease NX08_RS19310 PF04397 LytTr DNA-binding domain NX08_RS19310 PF00072 Response regulator receiver domain NX08_RS19315 PF02743 Cache domain NX08_RS19315 PF00672 HAMP domain NX08_RS19315 PF06580 Histidine kinase NX08_RS19315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS19340 PF05974 Domain of unknown function (DUF892) NX08_RS19345 PF05067 Manganese containing catalase NX08_RS19380 PF02954 Bacterial regulatory protein, Fis family NX08_RS19380 PF00072 Response regulator receiver domain NX08_RS19380 PF00158 Sigma-54 interaction domain NX08_RS19395 PF01654 Cytochrome bd terminal oxidase subunit I NX08_RS19400 PF02322 Cytochrome bd terminal oxidase subunit II NX08_RS19420 PF16363 GDP-mannose 4,6 dehydratase NX08_RS19430 PF03275 UDP-galactopyranose mutase NX08_RS19440 PF00005 ABC transporter NX08_RS19440 PF00664 ABC transporter transmembrane region NX08_RS19455 PF00107 Zinc-binding dehydrogenase NX08_RS19455 PF13823 Alcohol dehydrogenase GroES-associated NX08_RS19455 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS19495 PF00593 TonB dependent receptor NX08_RS19495 PF07715 TonB-dependent Receptor Plug Domain NX08_RS19510 PF00005 ABC transporter NX08_RS19540 PF00654 Voltage gated chloride channel NX08_RS19550 PF00557 Metallopeptidase family M24 NX08_RS19645 PF00589 Phage integrase family NX08_RS19645 PF13356 Arm DNA-binding domain NX08_RS19665 PF04545 Sigma-70, region 4 NX08_RS19665 PF04539 Sigma-70 region 3 NX08_RS19665 PF04546 Sigma-70, non-essential region NX08_RS19665 PF00140 Sigma-70 factor, region 1.2 NX08_RS19665 PF03979 Sigma-70 factor, region 1.1 NX08_RS19665 PF04542 Sigma-70 region 2 NX08_RS19670 PF02580 D-Tyr-tRNA(Tyr) deacylase NX08_RS19675 PF03279 Bacterial lipid A biosynthesis acyltransferase NX08_RS19685 PF00925 GTP cyclohydrolase II NX08_RS19705 PF00535 Glycosyl transferase family 2 NX08_RS19720 PF01189 16S rRNA methyltransferase RsmB/F NX08_RS19720 PF01029 NusB family NX08_RS19725 PF02911 Formyl transferase, C-terminal domain NX08_RS19725 PF00551 Formyl transferase NX08_RS19730 PF01327 Polypeptide deformylase NX08_RS19735 PF01476 LysM domain NX08_RS19740 PF17782 DprA winged helix domain NX08_RS19740 PF02481 DNA recombination-mediator protein A NX08_RS19745 PF04361 Protein of unknown function (DUF494) NX08_RS19750 PF00114 Pilin (bacterial filament) NX08_RS19750 PF07963 Prokaryotic N-terminal methylation motif NX08_RS19760 PF01751 Toprim domain NX08_RS19760 PF01131 DNA topoisomerase NX08_RS19760 PF13368 Topoisomerase C-terminal repeat NX08_RS19765 PF01300 Telomere recombination NX08_RS19790 PF01343 Peptidase family S49 NX08_RS19795 PF01554 MatE NX08_RS19815 PF18319 PriA DNA helicase Cys-rich region (CRR) domain NX08_RS19815 PF17764 3′ DNA-binding domain (3′BD) NX08_RS19815 PF00271 Helicase conserved C-terminal domain NX08_RS19815 PF00270 DEAD/DEAH box helicase NX08_RS19815 PF18074 Primosomal protein N C-terminal domain NX08_RS19835 PF07992 Pyridine nucleotide-disulphide oxidoreductase NX08_RS19840 PF03458 UPF0126 domain NX08_RS19845 PF04545 Sigma-70, region 4 NX08_RS19845 PF04542 Sigma-70 region 2 NX08_RS19850 PF03167 Uracil DNA glycosylase superfamily NX08_RS19855 PF00072 Response regulator receiver domain NX08_RS19860 PF18075 FtsX extracellular domain NX08_RS19865 PF00005 ABC transporter NX08_RS19870 PF12300 ATP-dependent RNA helicase RhlB NX08_RS19870 PF00271 Helicase conserved C-terminal domain NX08_RS19870 PF00270 DEAD/DEAH box helicase NX08_RS19875 PF00085 Thioredoxin NX08_RS19880 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain NX08_RS19880 PF07498 Rho termination factor, N-terminal domain NX08_RS19880 PF07497 Rho termination factor, RNA-binding domain NX08_RS19890 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) NX08_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS19895 PF03466 LysR substrate binding domain NX08_RS19905 PF03971 Monomeric isocitrate dehydrogenase NX08_RS19920 PF09704 CRISPR-associated protein (Cas_Cas5) NX08_RS19940 PF01867 CRISPR associated protein Cas1 NX08_RS19945 PF09827 CRISPR associated protein Cas2 NX08_RS19955 PF04972 BON domain NX08_RS19955 PF01476 LysM domain NX08_RS19960 PF14489 QueF-like protein NX08_RS19960 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term NX08_RS19970 PF13533 Biotin-lipoyl like NX08_RS19975 PF00873 AcrB/AcrD/AcrF family NX08_RS19980 PF00873 AcrB/AcrD/AcrF family NX08_RS20000 PF07063 Domain of unknown function (DUF1338) NX08_RS20040 PF01427 D-ala-D-ala dipeptidase NX08_RS20045 PF01510 N-acetylmuramoyl-L-alanine amidase NX08_RS20055 PF13378 Enolase C-terminal domain-like NX08_RS20055 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_RS20065 PF13520 Amino acid permease NX08_RS20080 PF05360 yiaA/B two helix domain NX08_RS20085 PF07995 Glucose / Sorbosone dehydrogenase NX08_RS20090 PF14310 Fibronectin type III-like domain NX08_RS20090 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_RS20090 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_RS20095 PF02152 Dihydroneopterin aldolase NX08_RS20100 PF00814 Glycoprotease family NX08_RS20105 PF01165 Ribosomal protein S21 NX08_RS20110 PF09424 Yqey-like protein NX08_RS20115 PF03631 Virulence factor BrkB NX08_RS20120 PF08275 DNA primase catalytic core, N-terminal domain NX08_RS20120 PF10410 DnaB-helicase binding domain of primase NX08_RS20120 PF08278 DNA primase DnaG DnaB-binding NX08_RS20120 PF01807 CHC2 zinc finger NX08_RS20125 PF13593 SBF-like CPA transporter family (DUF4137) NX08_RS20135 PF01040 UbiA prenyltransferase family NX08_RS20160 PF00510 Cytochrome c oxidase subunit III NX08_RS20165 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 NX08_RS20175 PF00115 Cytochrome C and Quinol oxidase polypeptide I NX08_RS20180 PF02790 Cytochrome C oxidase subunit II, transmembrane domain NX08_RS20180 PF00116 Cytochrome C oxidase subunit II, periplasmic domain NX08_RS20190 PF01619 Proline dehydrogenase NX08_RS20190 PF18327 Proline utilization A proline dehydrogenase N-terminal domain NX08_RS20190 PF14850 DNA-binding domain of Proline dehydrogenase NX08_RS20190 PF00171 Aldehyde dehydrogenase family NX08_RS20230 PF00579 tRNA synthetases class I (W and Y) NX08_RS20235 PF04225 Opacity-associated protein A LysM-like domain NX08_RS20235 PF01551 Peptidase family M23 NX08_RS20240 PF03702 Anhydro-N-acetylmuramic acid kinase NX08_RS20250 PF07690 Major Facilitator Superfamily NX08_RS20255 PF03372 Endonuclease/Exonuclease/phosphatase family NX08_RS20260 PF00156 Phosphoribosyl transferase domain NX08_RS20270 PF13614 AAA domain NX08_RS20275 PF17762 HTH domain found in ParB protein NX08_RS20275 PF02195 ParB-like nuclease domain NX08_RS20290 PF01370 NAD dependent epimerase/dehydratase family NX08_RS20295 PF00535 Glycosyl transferase family 2 NX08_RS20310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III NX08_RS20310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain NX08_RS20310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I NX08_RS20310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II NX08_RS20315 PF00692 dUTPase NX08_RS20320 PF04127 DNA / pantothenate metabolism flavoprotein NX08_RS20320 PF02441 Flavoprotein NX08_RS20325 PF04002 RadC-like JAB domain NX08_RS20330 PF05746 DALR anticodon binding domain NX08_RS20330 PF00750 tRNA synthetases class I (R) NX08_RS20330 PF03485 Arginyl tRNA synthetase N terminal domain NX08_RS20345 PF00106 short chain dehydrogenase NX08_RS20355 PF03033 Glycosyltransferase family 28 N-terminal domain NX08_RS20360 PF00975 Thioesterase domain NX08_RS20360 PF00550 Phosphopantetheine attachment site NX08_RS20360 PF00668 Condensation domain NX08_RS20360 PF13193 AMP-binding enzyme C-terminal domain NX08_RS20360 PF00501 AMP-binding enzyme NX08_RS20365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain NX08_RS20365 PF17944 Arginine decarboxylase C-terminal helical extension NX08_RS20365 PF17810 Arginine decarboxylase helical bundle domain NX08_RS20370 PF17284 Spermidine synthase tetramerisation domain NX08_RS20400 PF00963 Cohesin domain NX08_RS20400 PF00754 F5/8 type C domain NX08_RS20400 PF02838 Glycosyl hydrolase family 20, domain 2 NX08_RS20400 PF07555 beta-N-acetylglucosaminidase NX08_RS20400 PF00041 Fibronectin type III domain NX08_RS20405 PF00543 Nitrogen regulatory protein P-II NX08_RS20410 PF04380 Membrane fusogenic activity NX08_RS20440 PF00664 ABC transporter transmembrane region NX08_RS20440 PF00005 ABC transporter NX08_RS20440 PF03412 Peptidase C39 family NX08_RS20505 PF01381 Helix-turn-helix NX08_RS20560 PF00665 Integrase core domain NX08_RS20585 PF00563 EAL domain NX08_RS20585 PF12792 CSS motif domain associated with EAL NX08_RS20590 PF00487 Fatty acid desaturase NX08_RS20595 PF00970 Oxidoreductase FAD-binding domain NX08_RS20595 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_RS20595 PF00175 Oxidoreductase NAD-binding domain NX08_RS20600 PF00440 Bacterial regulatory proteins, tetR family NX08_RS20610 PF01139 tRNA-splicing ligase RtcB NX08_RS20650 PF01370 NAD dependent epimerase/dehydratase family NX08_RS20650 PF08338 Domain of unknown function (DUF1731) NX08_RS20660 PF00595 PDZ domain NX08_RS20680 PF01594 AI-2E family transporter NX08_RS20685 PF13419 Haloacid dehalogenase-like hydrolase NX08_RS20690 PF02789 Cytosol aminopeptidase family, N-terminal domain NX08_RS20690 PF00883 Cytosol aminopeptidase family, catalytic domain NX08_RS20700 PF04542 Sigma-70 region 2 NX08_RS20700 PF08281 Sigma-70, region 4 NX08_RS20705 PF00199 Catalase NX08_RS20720 PF00072 Response regulator receiver domain NX08_RS20720 PF00196 Bacterial regulatory proteins, luxR family NX08_RS20725 PF07730 Histidine kinase NX08_RS20730 PF13533 Biotin-lipoyl like NX08_RS20735 PF00005 ABC transporter NX08_RS20755 PF00892 EamA-like transporter family NX08_RS20785 PF00753 Metallo-beta-lactamase superfamily NX08_RS20790 PF00579 tRNA synthetases class I (W and Y) NX08_RS20795 PF05532 CsbD-like NX08_RS20810 PF00491 Arginase family NX08_RS20840 PF02223 Thymidylate kinase NX08_RS20855 PF03309 Type III pantothenate kinase NX08_RS20860 PF03099 Biotin/lipoate A/B protein ligase family NX08_RS20860 PF08279 HTH domain NX08_RS20860 PF02237 Biotin protein ligase C terminal domain NX08_RS20890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS20895 PF00486 Transcriptional regulatory protein, C terminal NX08_RS20895 PF00072 Response regulator receiver domain NX08_RS20905 PF01207 Dihydrouridine synthase (Dus) NX08_RS20925 PF06628 Catalase-related immune-responsive NX08_RS20925 PF00199 Catalase NX08_RS20940 PF13307 Helicase C-terminal domain NX08_RS20940 PF06733 DEAD_2 NX08_RS20955 PF18317 Shikimate 5'-dehydrogenase C-terminal domain NX08_RS20955 PF08501 Shikimate dehydrogenase substrate binding domain NX08_RS20955 PF01488 Shikimate / quinate 5-dehydrogenase NX08_RS20975 PF00175 Oxidoreductase NAD-binding domain NX08_RS20975 PF00667 FAD binding domain NX08_RS20975 PF00258 Flavodoxin NX08_RS20985 PF03466 LysR substrate binding domain NX08_RS20985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family NX08_RS21000 PF00490 Delta-aminolevulinic acid dehydratase NX08_RS21040 PF02798 Glutathione S-transferase, N-terminal domain NX08_RS21040 PF00043 Glutathione S-transferase, C-terminal domain NX08_RS21060 PF04820 Tryptophan halogenase NX08_RS21080 PF00005 ABC transporter NX08_RS21095 PF01381 Helix-turn-helix NX08_RS21105 PF02583 Metal-sensitive transcriptional repressor NX08_RS21110 PF01545 Cation efflux family NX08_RS21115 PF00970 Oxidoreductase FAD-binding domain NX08_RS21115 PF00111 2Fe-2S iron-sulfur cluster binding domain NX08_RS21115 PF00175 Oxidoreductase NAD-binding domain NX08_RS21120 PF00005 ABC transporter NX08_RS21125 PF01061 ABC-2 type transporter NX08_RS21135 PF08546 Ketopantoate reductase PanE/ApbA C terminal NX08_RS21135 PF02558 Ketopantoate reductase PanE/ApbA NX08_RS21160 PF03061 Thioesterase superfamily NX08_RS21180 PF00268 Ribonucleotide reductase, small chain NX08_RS21190 PF03477 ATP cone domain NX08_RS21190 PF02867 Ribonucleotide reductase, barrel domain NX08_RS21190 PF00317 Ribonucleotide reductase, all-alpha domain NX08_RS21205 PF13607 Succinyl-CoA ligase like flavodoxin domain NX08_RS21205 PF00583 Acetyltransferase (GNAT) family NX08_RS21205 PF13380 CoA binding domain NX08_RS21220 PF00571 CBS domain NX08_RS21220 PF03448 MgtE intracellular N domain NX08_RS21220 PF01769 Divalent cation transporter NX08_RS21230 PF00999 Sodium/hydrogen exchanger family NX08_RS21230 PF02254 TrkA-N domain NX08_RS21235 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain NX08_RS21235 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain NX08_RS21240 PF00723 Glycosyl hydrolases family 15 NX08_RS21255 PF05166 YcgL domain NX08_RS21260 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS21260 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS21270 PF00535 Glycosyl transferase family 2 NX08_RS21280 PF07519 Tannase and feruloyl esterase NX08_RS21310 PF07977 FabA-like domain NX08_RS21315 PF01553 Acyltransferase NX08_RS21325 PF00550 Phosphopantetheine attachment site NX08_RS21330 PF04820 Tryptophan halogenase NX08_RS21400 PF00005 ABC transporter NX08_RS21415 PF05114 Protein of unknown function (DUF692) NX08_RS21445 PF01218 Coproporphyrinogen III oxidase NX08_RS21460 PF00202 Aminotransferase class-III NX08_RS21485 PF00561 alpha/beta hydrolase fold NX08_RS21490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS21490 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS21495 PF00072 Response regulator receiver domain NX08_RS21495 PF00486 Transcriptional regulatory protein, C terminal NX08_RS21500 PF01367 5'-3' exonuclease, C-terminal SAM fold NX08_RS21500 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain NX08_RS21500 PF00476 DNA polymerase family A NX08_RS21500 PF01612 3'-5' exonuclease NX08_RS21545 PF14602 Hexapeptide repeat of succinyl-transferase NX08_RS21545 PF12464 Maltose acetyltransferase NX08_RS21555 PF13361 UvrD-like helicase C-terminal domain NX08_RS21555 PF00580 UvrD/REP helicase N-terminal domain NX08_RS21575 PF13396 Phospholipase_D-nuclease N-terminal NX08_RS21575 PF13091 PLD-like domain NX08_RS21585 PF04909 Amidohydrolase NX08_RS21595 PF00471 Ribosomal protein L33 NX08_RS21600 PF00830 Ribosomal L28 family NX08_RS21605 PF00873 AcrB/AcrD/AcrF family NX08_RS21610 PF13533 Biotin-lipoyl like NX08_RS21635 PF02527 rRNA small subunit methyltransferase G NX08_RS21650 PF01648 4'-phosphopantetheinyl transferase superfamily NX08_RS21655 PF04226 Transglycosylase associated protein NX08_RS21665 PF03372 Endonuclease/Exonuclease/phosphatase family NX08_RS21670 PF00480 ROK family NX08_RS21680 PF00639 PPIC-type PPIASE domain NX08_RS21680 PF09312 SurA N-terminal domain NX08_RS21690 PF00474 Sodium:solute symporter family NX08_RS21695 PF04341 Protein of unknown function, DUF485 NX08_RS21705 PF13193 AMP-binding enzyme C-terminal domain NX08_RS21705 PF16177 Acetyl-coenzyme A synthetase N-terminus NX08_RS21705 PF00501 AMP-binding enzyme NX08_RS21710 PF00196 Bacterial regulatory proteins, luxR family NX08_RS21710 PF00072 Response regulator receiver domain NX08_RS21760 PF01557 Fumarylacetoacetate (FAA) hydrolase family NX08_RS21765 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_RS21765 PF13378 Enolase C-terminal domain-like NX08_RS21770 PF05336 L-rhamnose mutarotase NX08_RS21775 PF07690 Major Facilitator Superfamily NX08_RS21780 PF01614 Bacterial transcriptional regulator NX08_RS21780 PF09339 IclR helix-turn-helix domain NX08_RS21790 PF02659 Putative manganese efflux pump NX08_RS21795 PF00512 His Kinase A (phospho-acceptor) domain NX08_RS21795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase NX08_RS21805 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain NX08_RS21805 PF06165 Glycosyltransferase family 36 NX08_RS21855 PF04357 TamB, inner membrane protein subunit of TAM complex NX08_RS21860 PF17243 POTRA domain TamA domain 1 NX08_RS21860 PF01103 Surface antigen NX08_RS21875 PF13340 Putative transposase of IS4/5 family (DUF4096) NX08_RS21885 PF07715 TonB-dependent Receptor Plug Domain NX08_RS21885 PF00593 TonB dependent receptor NX08_RS21890 PF13181 Tetratricopeptide repeat NX08_RS21895 PF02092 Glycyl-tRNA synthetase beta subunit NX08_RS21895 PF05746 DALR anticodon binding domain NX08_RS21900 PF02091 Glycyl-tRNA synthetase alpha subunit NX08_RS21905 PF00437 Type II/IV secretion system protein NX08_RS21905 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain NX08_RS21930 PF00958 GMP synthase C terminal domain NX08_RS21930 PF00117 Glutamine amidotransferase class-I NX08_RS21940 PF00902 Sec-independent protein translocase protein (TatC) NX08_RS21945 PF02416 mttA/Hcf106 family NX08_RS21950 PF02416 mttA/Hcf106 family NX08_RS21960 PF00762 Ferrochelatase NX08_RS21965 PF12697 Alpha/beta hydrolase family NX08_RS21980 PF04381 Putative exonuclease, RdgC NX08_RS21985 PF01171 PP-loop family NX08_RS22000 PF00356 Bacterial regulatory proteins, lacI family NX08_RS22005 PF03648 Glycosyl hydrolase family 67 N-terminus NX08_RS22005 PF07477 Glycosyl hydrolase family 67 C-terminus NX08_RS22005 PF07488 Glycosyl hydrolase family 67 middle domain NX08_RS22015 PF13378 Enolase C-terminal domain-like NX08_RS22015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain NX08_RS22020 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain NX08_RS22020 PF04616 Glycosyl hydrolases family 43 NX08_RS22025 PF00933 Glycosyl hydrolase family 3 N terminal domain NX08_RS22025 PF01915 Glycosyl hydrolase family 3 C-terminal domain NX08_RS22025 PF07691 PA14 domain NX08_RS22025 PF14310 Fibronectin type III-like domain NX08_RS22030 PF08125 Mannitol dehydrogenase C-terminal domain NX08_RS22030 PF01232 Mannitol dehydrogenase Rossmann domain NX08_RS22065 PF02614 Glucuronate isomerase NX08_RS22070 PF00553 Cellulose binding domain NX08_RS22070 PF00331 Glycosyl hydrolase family 10 NX08_RS22070 PF03422 Carbohydrate binding module (family 6) NX08_RS22100 PF04616 Glycosyl hydrolases family 43 NX08_RS22135 PF00109 Beta-ketoacyl synthase, N-terminal domain NX08_RS22135 PF14765 Polyketide synthase dehydratase NX08_RS22135 PF00550 Phosphopantetheine attachment site NX08_RS22135 PF08659 KR domain NX08_RS22135 PF02801 Beta-ketoacyl synthase, C-terminal domain NX08_RS22135 PF16197 Ketoacyl-synthetase C-terminal extension NX08_RS22135 PF08240 Alcohol dehydrogenase GroES-like domain NX08_RS22135 PF00107 Zinc-binding dehydrogenase NX08_RS22135 PF00698 Acyl transferase domain NX08_RS22140 PF01553 Acyltransferase NX08_RS22150 PF00356 Bacterial regulatory proteins, lacI family NX08_RS22165 PF04820 Tryptophan halogenase NX08_RS22170 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family NX08_RS22175 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) NX08_RS22180 PF04337 Protein of unknown function, DUF480 NX08_RS22195 PF13361 UvrD-like helicase C-terminal domain NX08_RS22195 PF00580 UvrD/REP helicase N-terminal domain NX08_RS22200 PF00265 Thymidine kinase NX08_RS22210 PF04349 Periplasmic glucan biosynthesis protein, MdoG NX08_RS22220 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain NX08_RS22220 PF06827 Zinc finger found in FPG and IleRS NX08_RS22220 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain NX08_RS22260 PF00360 Phytochrome region NX08_RS22260 PF01590 GAF domain NX08_RS22260 PF08446 PAS fold NX08_RS22260 PF13426 PAS domain NX08_RS22265 PF01126 Heme oxygenase NX08_RS22270 PF07690 Major Facilitator Superfamily NX08_RS22275 PF01263 Aldose 1-epimerase NX08_RS22285 PF02810 SEC-C motif NX08_RS22290 PF01925 Sulfite exporter TauE/SafE NX08_RS22320 PF02463 RecF/RecN/SMC N terminal domain NX08_RS22325 PF01227 GTP cyclohydrolase I NX08_RS22340 PF00529 HlyD membrane-fusion protein of T1SS NX08_RS22340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion NX08_RS22345 PF02321 Outer membrane efflux protein NX08_RS22350 PF04632 Fusaric acid resistance protein family NX08_RS22355 PF00083 Sugar (and other) transporter NX08_RS22365 PF13396 Phospholipase_D-nuclease N-terminal NX08_RS22365 PF13091 PLD-like domain NX08_RS22410 PF00849 RNA pseudouridylate synthase NX08_RS22430 PF02463 RecF/RecN/SMC N terminal domain NX08_RS22475 PF01381 Helix-turn-helix NX08_RS22485 PF13538 UvrD-like helicase C-terminal domain NX08_RS22490 PF00580 UvrD/REP helicase N-terminal domain NX08_RS22490 PF13361 UvrD-like helicase C-terminal domain NX08_RS22490 PF12705 PD-(D/E)XK nuclease superfamily NX08_RS22495 PF17946 RecC C-terminal domain NX08_RS22530 PF00005 ABC transporter NX08_RS22535 PF02405 Permease MlaE NX08_RS22540 PF02470 MlaD protein NX08_RS22545 PF05494 MlaC protein NX08_RS22555 PF04333 MlaA lipoprotein NX08_RS22570 PF00255 Glutathione peroxidase NX08_RS22580 PF02646 RmuC family NX08_RS22615 PF13520 Amino acid permease NX08_RS22635 PF10947 Protein of unknown function (DUF2628) NX08_RS22645 PF17853 GGDEF-like domain NX08_RS22645 PF13556 PucR C-terminal helix-turn-helix domain NX08_RS22645 PF05651 Putative sugar diacid recognition NX08_RS22650 PF02595 Glycerate kinase family NX08_RS22655 PF07690 Major Facilitator Superfamily NX08_RS22675 PF17785 PUA-like domain NX08_RS22675 PF10672 S-adenosylmethionine-dependent methyltransferase NX08_RS22685 PF03741 Integral membrane protein TerC family NX08_RS22690 PF01694 Rhomboid family NX08_RS22695 PF03009 Glycerophosphoryl diester phosphodiesterase family NX08_RS22705 PF01569 PAP2 superfamily NX08_RS22710 PF01926 50S ribosome-binding GTPase NX08_RS22710 PF12631 MnmE helical domain NX08_RS22710 PF10396 GTP-binding protein TrmE N-terminus NX08_RS22720 PF14849 YidC periplasmic domain NX08_RS22720 PF02096 60Kd inner membrane protein NX08_RS22725 PF00825 Ribonuclease P NX08_RS22730 PF00468 Ribosomal protein L34