locus-tag class description BJD12_RS00010 PF02261 Aspartate decarboxylase BJD12_RS00015 PF00342 Phosphoglucose isomerase BJD12_RS00035 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD12_RS00035 PF14310 Fibronectin type III-like domain BJD12_RS00035 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS00045 PF00474 Sodium:solute symporter family BJD12_RS00050 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS00050 PF00563 EAL domain BJD12_RS00050 PF01590 GAF domain BJD12_RS00050 PF00360 Phytochrome region BJD12_RS00055 PF00150 Cellulase (glycosyl hydrolase family 5) BJD12_RS00055 PF02013 Cellulose or protein binding domain BJD12_RS00060 PF00072 Response regulator receiver domain BJD12_RS00070 PF04551 GcpE protein BJD12_RS00075 PF01569 PAP2 superfamily BJD12_RS00080 PF07690 Major Facilitator Superfamily BJD12_RS00085 PF01177 Asp/Glu/Hydantoin racemase BJD12_RS00090 PF00892 EamA-like transporter family BJD12_RS00095 PF01565 FAD binding domain BJD12_RS00095 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BJD12_RS00100 PF01180 Dihydroorotate dehydrogenase BJD12_RS00115 PF00171 Aldehyde dehydrogenase family BJD12_RS00130 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BJD12_RS00145 PF01527 Transposase BJD12_RS00150 PF13683 Integrase core domain BJD12_RS00150 PF13276 HTH-like domain BJD12_RS00205 PF04002 RadC-like JAB domain BJD12_RS00275 PF01527 Transposase BJD12_RS00280 PF13276 HTH-like domain BJD12_RS00280 PF13333 Integrase core domain BJD12_RS00280 PF00665 Integrase core domain BJD12_RS00340 PF00664 ABC transporter transmembrane region BJD12_RS00340 PF00005 ABC transporter BJD12_RS00340 PF03412 Peptidase C39 family BJD12_RS00360 PF07690 Major Facilitator Superfamily BJD12_RS00365 PF02794 RTX toxin acyltransferase family BJD12_RS00435 PF00672 HAMP domain BJD12_RS00435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00450 PF00535 Glycosyl transferase family 2 BJD12_RS00455 PF01522 Polysaccharide deacetylase BJD12_RS00455 PF14883 Hypothetical glycosyl hydrolase family 13 BJD12_RS00465 PF17287 POTRA domain BJD12_RS00465 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BJD12_RS00465 PF08479 POTRA domain, ShlB-type BJD12_RS00470 PF13018 Extended Signal Peptide of Type V secretion system BJD12_RS00470 PF05860 haemagglutination activity domain BJD12_RS00470 PF13332 Hemagglutinin repeat BJD12_RS00470 PF05594 Haemagluttinin repeat BJD12_RS00470 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BJD12_RS00470 PF13332 Hemagglutinin repeat BJD12_RS00470 PF05594 Haemagluttinin repeat BJD12_RS00470 PF05860 haemagglutination activity domain BJD12_RS00470 PF18451 Contact-dependent growth inhibition CdiA C-terminal domain BJD12_RS00470 PF13018 Extended Signal Peptide of Type V secretion system BJD12_RS00490 PF13332 Hemagglutinin repeat BJD12_RS00490 PF05860 haemagglutination activity domain BJD12_RS00490 PF15605 Bacterial toxin 28 BJD12_RS00490 PF04829 Pre-toxin domain with VENN motif BJD12_RS00505 PF13683 Integrase core domain BJD12_RS00505 PF13276 HTH-like domain BJD12_RS00510 PF01527 Transposase BJD12_RS00515 PF03073 TspO/MBR family BJD12_RS00525 PF01842 ACT domain BJD12_RS00525 PF00742 Homoserine dehydrogenase BJD12_RS00525 PF03447 Homoserine dehydrogenase, NAD binding domain BJD12_RS00525 PF00696 Amino acid kinase family BJD12_RS00525 PF13840 ACT domain BJD12_RS00530 PF00288 GHMP kinases N terminal domain BJD12_RS00530 PF08544 GHMP kinases C terminal BJD12_RS00540 PF14821 Threonine synthase N terminus BJD12_RS00540 PF00291 Pyridoxal-phosphate dependent enzyme BJD12_RS00550 PF00027 Cyclic nucleotide-binding domain BJD12_RS00550 PF13545 Crp-like helix-turn-helix domain BJD12_RS00555 PF13393 Histidyl-tRNA synthetase BJD12_RS00555 PF03129 Anticodon binding domain BJD12_RS00565 PF08029 HisG, C-terminal domain BJD12_RS00565 PF01634 ATP phosphoribosyltransferase BJD12_RS00570 PF00815 Histidinol dehydrogenase BJD12_RS00575 PF00155 Aminotransferase class I and II BJD12_RS00580 PF00475 Imidazoleglycerol-phosphate dehydratase BJD12_RS00585 PF00117 Glutamine amidotransferase class-I BJD12_RS00590 PF00977 Histidine biosynthesis protein BJD12_RS00595 PF00977 Histidine biosynthesis protein BJD12_RS00600 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BJD12_RS00600 PF01502 Phosphoribosyl-AMP cyclohydrolase BJD12_RS00625 PF03079 ARD/ARD' family BJD12_RS00630 PF00596 Class II Aldolase and Adducin N-terminal domain BJD12_RS00640 PF13520 Amino acid permease BJD12_RS00645 PF13520 Amino acid permease BJD12_RS00655 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD12_RS00655 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD12_RS00660 PF01565 FAD binding domain BJD12_RS00660 PF02913 FAD linked oxidases, C-terminal domain BJD12_RS00680 PF09285 Elongation factor P, C-terminal BJD12_RS00680 PF08207 Elongation factor P (EF-P) KOW-like domain BJD12_RS00680 PF01132 Elongation factor P (EF-P) OB domain BJD12_RS00685 PF00106 short chain dehydrogenase BJD12_RS00690 PF00682 HMGL-like BJD12_RS00700 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS00710 PF02421 Ferrous iron transport protein B BJD12_RS00710 PF07670 Nucleoside recognition BJD12_RS00710 PF07664 Ferrous iron transport protein B C terminus BJD12_RS00725 PF00155 Aminotransferase class I and II BJD12_RS00730 PF03473 MOSC domain BJD12_RS00730 PF03475 3-alpha domain BJD12_RS00735 PF05173 Dihydrodipicolinate reductase, C-terminus BJD12_RS00735 PF01113 Dihydrodipicolinate reductase, N-terminus BJD12_RS00740 PF00117 Glutamine amidotransferase class-I BJD12_RS00740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BJD12_RS00750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD12_RS00750 PF02142 MGS-like domain BJD12_RS00750 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BJD12_RS00755 PF03449 Transcription elongation factor, N-terminal BJD12_RS00755 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD12_RS00765 PF17768 RecJ OB domain BJD12_RS00765 PF02272 DHHA1 domain BJD12_RS00765 PF01368 DHH family BJD12_RS00780 PF00072 Response regulator receiver domain BJD12_RS00780 PF04397 LytTr DNA-binding domain BJD12_RS00785 PF00472 RF-1 domain BJD12_RS00785 PF03462 PCRF domain BJD12_RS00790 PF00152 tRNA synthetases class II (D, K and N) BJD12_RS00790 PF01336 OB-fold nucleic acid binding domain BJD12_RS00795 PF00072 Response regulator receiver domain BJD12_RS00805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS00805 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS00805 PF01627 Hpt domain BJD12_RS00805 PF00072 Response regulator receiver domain BJD12_RS00810 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS00815 PF00501 AMP-binding enzyme BJD12_RS00815 PF13193 AMP-binding enzyme C-terminal domain BJD12_RS00825 PF00694 Aconitase C-terminal domain BJD12_RS00825 PF00330 Aconitase family (aconitate hydratase) BJD12_RS00840 PF06434 Aconitate hydratase 2 N-terminus BJD12_RS00840 PF11791 Aconitate B N-terminal domain BJD12_RS00840 PF00330 Aconitase family (aconitate hydratase) BJD12_RS00845 PF00561 alpha/beta hydrolase fold BJD12_RS00850 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS00850 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS00850 PF00563 EAL domain BJD12_RS00855 PF00072 Response regulator receiver domain BJD12_RS00855 PF01339 CheB methylesterase BJD12_RS00860 PF03975 CheD chemotactic sensory transduction BJD12_RS00865 PF01739 CheR methyltransferase, SAM binding domain BJD12_RS00865 PF03705 CheR methyltransferase, all-alpha domain BJD12_RS00870 PF02203 Tar ligand binding domain homologue BJD12_RS00870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00870 PF00672 HAMP domain BJD12_RS00880 PF01584 CheW-like domain BJD12_RS00885 PF07317 Flagellar regulator YcgR BJD12_RS00885 PF07238 PilZ domain BJD12_RS00895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00895 PF02203 Tar ligand binding domain homologue BJD12_RS00895 PF00672 HAMP domain BJD12_RS00900 PF00672 HAMP domain BJD12_RS00900 PF02203 Tar ligand binding domain homologue BJD12_RS00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00905 PF02203 Tar ligand binding domain homologue BJD12_RS00905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00905 PF00672 HAMP domain BJD12_RS00910 PF00672 HAMP domain BJD12_RS00910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00915 PF00672 HAMP domain BJD12_RS00915 PF02203 Tar ligand binding domain homologue BJD12_RS00920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00930 PF00672 HAMP domain BJD12_RS00930 PF02203 Tar ligand binding domain homologue BJD12_RS00930 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00935 PF17200 Single Cache domain 2 BJD12_RS00935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00935 PF00672 HAMP domain BJD12_RS00945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS00945 PF00672 HAMP domain BJD12_RS00950 PF01627 Hpt domain BJD12_RS00950 PF01584 CheW-like domain BJD12_RS00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS00950 PF02895 Signal transducing histidine kinase, homodimeric domain BJD12_RS00950 PF09078 CheY binding BJD12_RS00955 PF00072 Response regulator receiver domain BJD12_RS00965 PF01584 CheW-like domain BJD12_RS00970 PF13614 AAA domain BJD12_RS00975 PF13677 Membrane MotB of proton-channel complex MotA/MotB BJD12_RS00975 PF00691 OmpA family BJD12_RS00980 PF01618 MotA/TolQ/ExbB proton channel family BJD12_RS01035 PF01527 Transposase BJD12_RS01040 PF13683 Integrase core domain BJD12_RS01040 PF13276 HTH-like domain BJD12_RS01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS01055 PF02895 Signal transducing histidine kinase, homodimeric domain BJD12_RS01055 PF01584 CheW-like domain BJD12_RS01055 PF00072 Response regulator receiver domain BJD12_RS01055 PF01627 Hpt domain BJD12_RS01060 PF04344 Chemotaxis phosphatase, CheZ BJD12_RS01065 PF00072 Response regulator receiver domain BJD12_RS01070 PF04539 Sigma-70 region 3 BJD12_RS01070 PF04542 Sigma-70 region 2 BJD12_RS01070 PF04545 Sigma-70, region 4 BJD12_RS01075 PF10609 NUBPL iron-transfer P-loop NTPase BJD12_RS01080 PF00448 SRP54-type protein, GTPase domain BJD12_RS01085 PF00771 FHIPEP family BJD12_RS01090 PF01312 FlhB HrpN YscU SpaS Family BJD12_RS01095 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS01105 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS01105 PF13188 PAS domain BJD12_RS01105 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS01105 PF00563 EAL domain BJD12_RS01110 PF01311 Bacterial export proteins, family 1 BJD12_RS01115 PF01313 Bacterial export proteins, family 3 BJD12_RS01125 PF00813 FliP family BJD12_RS01130 PF04347 Flagellar biosynthesis protein, FliO BJD12_RS01135 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BJD12_RS01140 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BJD12_RS01140 PF02154 Flagellar motor switch protein FliM BJD12_RS01160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD12_RS01160 PF18269 T3SS EscN ATPase C-terminal domain BJD12_RS01170 PF14842 FliG N-terminal domain BJD12_RS01170 PF01706 FliG C-terminal domain BJD12_RS01170 PF14841 FliG middle domain BJD12_RS01175 PF08345 Flagellar M-ring protein C-terminal BJD12_RS01175 PF01514 Secretory protein of YscJ/FliF family BJD12_RS01180 PF02049 Flagellar hook-basal body complex protein FliE BJD12_RS01190 PF00534 Glycosyl transferases group 1 BJD12_RS01190 PF00535 Glycosyl transferase family 2 BJD12_RS01235 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD12_RS01235 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD12_RS01245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD12_RS01250 PF00158 Sigma-54 interaction domain BJD12_RS01250 PF06490 Flagellar regulatory protein FleQ BJD12_RS01250 PF02954 Bacterial regulatory protein, Fis family BJD12_RS01255 PF01339 CheB methylesterase BJD12_RS01255 PF00072 Response regulator receiver domain BJD12_RS01260 PF04963 Sigma-54 factor, core binding domain BJD12_RS01260 PF04552 Sigma-54, DNA binding domain BJD12_RS01260 PF00309 Sigma-54 factor, Activator interacting domain (AID) BJD12_RS01265 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS01265 PF00072 Response regulator receiver domain BJD12_RS01280 PF02561 Flagellar protein FliS BJD12_RS01285 PF07195 Flagellar hook-associated protein 2 C-terminus BJD12_RS01285 PF07196 Flagellin hook IN motif BJD12_RS01285 PF02465 Flagellar hook-associated protein 2 N-terminus BJD12_RS01290 PF00669 Bacterial flagellin N-terminal helical region BJD12_RS01290 PF00700 Bacterial flagellin C-terminal helical region BJD12_RS01295 PF00700 Bacterial flagellin C-terminal helical region BJD12_RS01295 PF00669 Bacterial flagellin N-terminal helical region BJD12_RS01300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD12_RS01300 PF07196 Flagellin hook IN motif BJD12_RS01305 PF10135 Rod binding protein BJD12_RS01305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BJD12_RS01310 PF02119 Flagellar P-ring protein BJD12_RS01315 PF02107 Flagellar L-ring protein BJD12_RS01320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD12_RS01320 PF00460 Flagella basal body rod protein BJD12_RS01335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD12_RS01335 PF00460 Flagella basal body rod protein BJD12_RS01340 PF00460 Flagella basal body rod protein BJD12_RS01340 PF07559 Flagellar basal body protein FlaE BJD12_RS01340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD12_RS01345 PF03963 Flagellar hook capping protein - N-terminal region BJD12_RS01350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BJD12_RS01350 PF00460 Flagella basal body rod protein BJD12_RS01355 PF00460 Flagella basal body rod protein BJD12_RS01360 PF01584 CheW-like domain BJD12_RS01360 PF00072 Response regulator receiver domain BJD12_RS01380 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS01385 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS01385 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS01385 PF00563 EAL domain BJD12_RS01390 PF07730 Histidine kinase BJD12_RS01390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS01395 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS01395 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS01395 PF00563 EAL domain BJD12_RS01410 PF00672 HAMP domain BJD12_RS01410 PF12729 Four helix bundle sensory module for signal transduction BJD12_RS01410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS01415 PF04356 Protein of unknown function (DUF489) BJD12_RS01425 PF00293 NUDIX domain BJD12_RS01430 PF02617 ATP-dependent Clp protease adaptor protein ClpS BJD12_RS01435 PF02861 Clp amino terminal domain, pathogenicity island component BJD12_RS01435 PF17871 AAA lid domain BJD12_RS01435 PF10431 C-terminal, D2-small domain, of ClpB protein BJD12_RS01435 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS01435 PF07724 AAA domain (Cdc48 subfamily) BJD12_RS01445 PF01176 Translation initiation factor 1A / IF-1 BJD12_RS01450 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BJD12_RS01460 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS01465 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BJD12_RS01465 PF09397 Ftsk gamma domain BJD12_RS01465 PF17854 FtsK alpha domain BJD12_RS01465 PF01580 FtsK/SpoIIIE family BJD12_RS01475 PF03548 Outer membrane lipoprotein carrier protein LolA BJD12_RS01480 PF12002 MgsA AAA+ ATPase C terminal BJD12_RS01480 PF16193 AAA C-terminal domain BJD12_RS01480 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS01485 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BJD12_RS01490 PF02803 Thiolase, C-terminal domain BJD12_RS01490 PF00108 Thiolase, N-terminal domain BJD12_RS01495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD12_RS01495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD12_RS01495 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS01505 PF00334 Nucleoside diphosphate kinase BJD12_RS01510 PF04055 Radical SAM superfamily BJD12_RS01520 PF13464 Domain of unknown function (DUF4115) BJD12_RS01530 PF01011 PQQ enzyme repeat BJD12_RS01530 PF13360 PQQ-like domain BJD12_RS01535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BJD12_RS01535 PF01926 50S ribosome-binding GTPase BJD12_RS01540 PF03453 MoeA N-terminal region (domain I and II) BJD12_RS01540 PF00994 Probable molybdopterin binding domain BJD12_RS01540 PF03454 MoeA C-terminal region (domain IV) BJD12_RS01545 PF00899 ThiF family BJD12_RS01560 PF03372 Endonuclease/Exonuclease/phosphatase family BJD12_RS01570 PF00994 Probable molybdopterin binding domain BJD12_RS01570 PF03454 MoeA C-terminal region (domain IV) BJD12_RS01570 PF03453 MoeA N-terminal region (domain I and II) BJD12_RS01575 PF12804 MobA-like NTP transferase domain BJD12_RS01585 PF10414 Sirohaem synthase dimerisation region BJD12_RS01585 PF14824 Sirohaem biosynthesis protein central BJD12_RS01585 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD12_RS01590 PF03861 ANTAR domain BJD12_RS01590 PF00072 Response regulator receiver domain BJD12_RS01605 PF07690 Major Facilitator Superfamily BJD12_RS01610 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD12_RS01610 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD12_RS01610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS01610 PF18267 Rubredoxin NAD+ reductase C-terminal domain BJD12_RS01610 PF04324 BFD-like [2Fe-2S] binding domain BJD12_RS01615 PF00355 Rieske [2Fe-2S] domain BJD12_RS01620 PF04324 BFD-like [2Fe-2S] binding domain BJD12_RS01620 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BJD12_RS01620 PF00384 Molybdopterin oxidoreductase BJD12_RS01620 PF01568 Molydopterin dinucleotide binding domain BJD12_RS01625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD12_RS01635 PF05974 Domain of unknown function (DUF892) BJD12_RS01645 PF08447 PAS fold BJD12_RS01645 PF08448 PAS fold BJD12_RS01645 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS01645 PF00563 EAL domain BJD12_RS01650 PF12951 Passenger-associated-transport-repeat BJD12_RS01650 PF12951 Passenger-associated-transport-repeat BJD12_RS01655 PF03797 Autotransporter beta-domain BJD12_RS01655 PF00082 Subtilase family BJD12_RS01675 PF07995 Glucose / Sorbosone dehydrogenase BJD12_RS01690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD12_RS01715 PF09335 SNARE associated Golgi protein BJD12_RS01725 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS01735 PF07690 Major Facilitator Superfamily BJD12_RS01740 PF00106 short chain dehydrogenase BJD12_RS01765 PF02585 GlcNAc-PI de-N-acetylase BJD12_RS01765 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BJD12_RS01785 PF05199 GMC oxidoreductase BJD12_RS01785 PF00732 GMC oxidoreductase BJD12_RS01790 PF00106 short chain dehydrogenase BJD12_RS01805 PF02627 Carboxymuconolactone decarboxylase family BJD12_RS01820 PF03466 LysR substrate binding domain BJD12_RS01820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS01835 PF01129 NAD:arginine ADP-ribosyltransferase BJD12_RS01840 PF13333 Integrase core domain BJD12_RS01840 PF00665 Integrase core domain BJD12_RS01840 PF13276 HTH-like domain BJD12_RS01845 PF01527 Transposase BJD12_RS01900 PF01527 Transposase BJD12_RS01920 PF02463 RecF/RecN/SMC N terminal domain BJD12_RS02025 PF01106 NifU-like domain BJD12_RS02030 PF01329 Pterin 4 alpha carbinolamine dehydratase BJD12_RS02040 PF02535 ZIP Zinc transporter BJD12_RS02045 PF11737 Protein of unknown function (DUF3300) BJD12_RS02050 PF01479 S4 domain BJD12_RS02050 PF00849 RNA pseudouridylate synthase BJD12_RS02055 PF12111 Polyribonucleotide phosphorylase C terminal BJD12_RS02055 PF00575 S1 RNA binding domain BJD12_RS02055 PF10150 Ribonuclease E/G family BJD12_RS02060 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS02060 PF00072 Response regulator receiver domain BJD12_RS02065 PF17773 UPF0176 acylphosphatase like domain BJD12_RS02065 PF00581 Rhodanese-like domain BJD12_RS02075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD12_RS02085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJD12_RS02085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJD12_RS02085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJD12_RS02110 PF01066 CDP-alcohol phosphatidyltransferase BJD12_RS02115 PF02151 UvrB/uvrC motif BJD12_RS02115 PF08459 UvrC Helix-hairpin-helix N-terminal BJD12_RS02115 PF01541 GIY-YIG catalytic domain BJD12_RS02125 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJD12_RS02130 PF02348 Cytidylyltransferase BJD12_RS02135 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BJD12_RS02140 PF00664 ABC transporter transmembrane region BJD12_RS02140 PF00005 ABC transporter BJD12_RS02150 PF01618 MotA/TolQ/ExbB proton channel family BJD12_RS02155 PF03772 Competence protein BJD12_RS02155 PF00753 Metallo-beta-lactamase superfamily BJD12_RS02170 PF00005 ABC transporter BJD12_RS02175 PF12704 MacB-like periplasmic core domain BJD12_RS02175 PF02687 FtsX-like permease family BJD12_RS02185 PF03937 Flavinator of succinate dehydrogenase BJD12_RS02190 PF13085 2Fe-2S iron-sulfur cluster binding domain BJD12_RS02200 PF00890 FAD binding domain BJD12_RS02200 PF02910 Fumarate reductase flavoprotein C-term BJD12_RS02205 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJD12_RS02210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BJD12_RS02220 PF01571 Aminomethyltransferase folate-binding domain BJD12_RS02225 PF17912 MalK OB fold domain BJD12_RS02225 PF00005 ABC transporter BJD12_RS02230 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BJD12_RS02230 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BJD12_RS02235 PF02685 Glucokinase BJD12_RS02240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BJD12_RS02245 PF00920 Dehydratase family BJD12_RS02250 PF01081 KDPG and KHG aldolase BJD12_RS02255 PF00873 AcrB/AcrD/AcrF family BJD12_RS02260 PF00873 AcrB/AcrD/AcrF family BJD12_RS02265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS02275 PF00034 Cytochrome c BJD12_RS02315 PF00672 HAMP domain BJD12_RS02315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS02315 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS02315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD12_RS02315 PF01627 Hpt domain BJD12_RS02315 PF00072 Response regulator receiver domain BJD12_RS02320 PF00575 S1 RNA binding domain BJD12_RS02320 PF09371 Tex-like protein N-terminal domain BJD12_RS02320 PF16921 Tex protein YqgF-like domain BJD12_RS02320 PF17674 HHH domain BJD12_RS02345 PF00561 alpha/beta hydrolase fold BJD12_RS02355 PF01066 CDP-alcohol phosphatidyltransferase BJD12_RS02375 PF03618 Kinase/pyrophosphorylase BJD12_RS02380 PF00391 PEP-utilising enzyme, mobile domain BJD12_RS02380 PF02896 PEP-utilising enzyme, TIM barrel domain BJD12_RS02380 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BJD12_RS02385 PF05552 Conserved TM helix BJD12_RS02385 PF00924 Mechanosensitive ion channel BJD12_RS02390 PF00929 Exonuclease BJD12_RS02395 PF14437 MafB19-like deaminase BJD12_RS02400 PF02742 Iron dependent repressor, metal binding and dimerisation domain BJD12_RS02400 PF01325 Iron dependent repressor, N-terminal DNA binding domain BJD12_RS02405 PF01566 Natural resistance-associated macrophage protein BJD12_RS02410 PF00561 alpha/beta hydrolase fold BJD12_RS02420 PF05977 Transmembrane secretion effector BJD12_RS02425 PF07969 Amidohydrolase family BJD12_RS02435 PF00857 Isochorismatase family BJD12_RS02445 PF07730 Histidine kinase BJD12_RS02445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS02450 PF00072 Response regulator receiver domain BJD12_RS02450 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS02465 PF00117 Glutamine amidotransferase class-I BJD12_RS02465 PF00958 GMP synthase C terminal domain BJD12_RS02465 PF02540 NAD synthase BJD12_RS02470 PF00478 IMP dehydrogenase / GMP reductase domain BJD12_RS02470 PF00571 CBS domain BJD12_RS02475 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BJD12_RS02475 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BJD12_RS02485 PF00999 Sodium/hydrogen exchanger family BJD12_RS02485 PF02254 TrkA-N domain BJD12_RS02490 PF00483 Nucleotidyl transferase BJD12_RS02495 PF02719 Polysaccharide biosynthesis protein BJD12_RS02500 PF00953 Glycosyl transferase family 4 BJD12_RS02505 PF18073 Rubredoxin metal binding domain BJD12_RS02515 PF00216 Bacterial DNA-binding protein BJD12_RS02520 PF00575 S1 RNA binding domain BJD12_RS02525 PF02224 Cytidylate kinase BJD12_RS02530 PF00444 Ribosomal protein L36 BJD12_RS02540 PF04371 Porphyromonas-type peptidyl-arginine deiminase BJD12_RS02545 PF00795 Carbon-nitrogen hydrolase BJD12_RS02570 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS02575 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS02580 PF01547 Bacterial extracellular solute-binding protein BJD12_RS02595 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS02605 PF03795 YCII-related domain BJD12_RS02610 PF02616 Segregation and condensation protein ScpA BJD12_RS02615 PF04079 Segregation and condensation complex subunit ScpB BJD12_RS02620 PF00849 RNA pseudouridylate synthase BJD12_RS02620 PF01479 S4 domain BJD12_RS02635 PF00795 Carbon-nitrogen hydrolase BJD12_RS02645 PF00155 Aminotransferase class I and II BJD12_RS02650 PF00005 ABC transporter BJD12_RS02655 PF03379 CcmB protein BJD12_RS02660 PF01578 Cytochrome C assembly protein BJD12_RS02670 PF03100 CcmE BJD12_RS02675 PF01578 Cytochrome C assembly protein BJD12_RS02675 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BJD12_RS02680 PF08534 Redoxin BJD12_RS02685 PF03918 Cytochrome C biogenesis protein BJD12_RS02715 PF00561 alpha/beta hydrolase fold BJD12_RS02725 PF00005 ABC transporter BJD12_RS02725 PF00664 ABC transporter transmembrane region BJD12_RS02730 PF00664 ABC transporter transmembrane region BJD12_RS02730 PF00005 ABC transporter BJD12_RS02735 PF01654 Cytochrome bd terminal oxidase subunit I BJD12_RS02740 PF02322 Cytochrome bd terminal oxidase subunit II BJD12_RS02760 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BJD12_RS02760 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BJD12_RS02765 PF00171 Aldehyde dehydrogenase family BJD12_RS02770 PF00696 Amino acid kinase family BJD12_RS02770 PF01472 PUA domain BJD12_RS02785 PF00206 Lyase BJD12_RS02790 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD12_RS02800 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase BJD12_RS02800 PF00696 Amino acid kinase family BJD12_RS02805 PF01546 Peptidase family M20/M25/M40 BJD12_RS02805 PF07687 Peptidase dimerisation domain BJD12_RS02815 PF00764 Arginosuccinate synthase BJD12_RS02825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJD12_RS02825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJD12_RS02835 PF01406 tRNA synthetases class I (C) catalytic domain BJD12_RS02835 PF09190 DALR domain BJD12_RS02840 PF02657 Fe-S metabolism associated domain BJD12_RS02850 PF01258 Prokaryotic dksA/traR C4-type zinc finger BJD12_RS02855 PF01809 Putative membrane protein insertion efficiency factor BJD12_RS02860 PF01979 Amidohydrolase family BJD12_RS02865 PF01551 Peptidase family M23 BJD12_RS02865 PF08460 Bacterial SH3 domain BJD12_RS02875 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BJD12_RS02880 PF05985 Ethanolamine ammonia-lyase light chain (EutC) BJD12_RS02900 PF01095 Pectinesterase BJD12_RS02905 PF00295 Glycosyl hydrolases family 28 BJD12_RS02915 PF13419 Haloacid dehalogenase-like hydrolase BJD12_RS02925 PF01979 Amidohydrolase family BJD12_RS02935 PF09285 Elongation factor P, C-terminal BJD12_RS02935 PF08207 Elongation factor P (EF-P) KOW-like domain BJD12_RS02935 PF01132 Elongation factor P (EF-P) OB domain BJD12_RS02940 PF04055 Radical SAM superfamily BJD12_RS02945 PF00563 EAL domain BJD12_RS02945 PF13188 PAS domain BJD12_RS02945 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS02945 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS02955 PF00588 SpoU rRNA Methylase family BJD12_RS02960 PF00459 Inositol monophosphatase family BJD12_RS02965 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJD12_RS02965 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJD12_RS02970 PF00545 ribonuclease BJD12_RS02985 PF16326 ABC transporter C-terminal domain BJD12_RS02985 PF12848 ABC transporter BJD12_RS02985 PF00005 ABC transporter BJD12_RS02990 PF03880 DbpA RNA binding domain BJD12_RS02990 PF00270 DEAD/DEAH box helicase BJD12_RS02990 PF00271 Helicase conserved C-terminal domain BJD12_RS03000 PF00156 Phosphoribosyl transferase domain BJD12_RS03005 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BJD12_RS03010 PF07859 alpha/beta hydrolase fold BJD12_RS03015 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS03015 PF14497 Glutathione S-transferase, C-terminal domain BJD12_RS03020 PF00313 'Cold-shock' DNA-binding domain BJD12_RS03025 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BJD12_RS03030 PF07152 YaeQ protein BJD12_RS03040 PF00072 Response regulator receiver domain BJD12_RS03040 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS03040 PF00563 EAL domain BJD12_RS03045 PF01435 Peptidase family M48 BJD12_RS03050 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD12_RS03055 PF00106 short chain dehydrogenase BJD12_RS03060 PF07879 PHB/PHA accumulation regulator DNA-binding domain BJD12_RS03060 PF05233 PHB accumulation regulatory domain BJD12_RS03075 PF01119 DNA mismatch repair protein, C-terminal domain BJD12_RS03075 PF08676 MutL C terminal dimerisation domain BJD12_RS03080 PF11741 AMIN domain BJD12_RS03080 PF01520 N-acetylmuramoyl-L-alanine amidase BJD12_RS03090 PF01256 Carbohydrate kinase BJD12_RS03090 PF03853 YjeF-related protein N-terminus BJD12_RS03095 PF08331 Domain of unknown function (DUF1730) BJD12_RS03100 PF13742 OB-fold nucleic acid binding domain BJD12_RS03100 PF02601 Exonuclease VII, large subunit BJD12_RS03110 PF03781 Sulfatase-modifying factor enzyme 1 BJD12_RS03120 PF00570 HRDC domain BJD12_RS03120 PF01612 3'-5' exonuclease BJD12_RS03125 PF01068 ATP dependent DNA ligase domain BJD12_RS03125 PF04679 ATP dependent DNA ligase C terminal region BJD12_RS03125 PF13298 DNA polymerase Ligase (LigD) BJD12_RS03145 PF13356 Arm DNA-binding domain BJD12_RS03145 PF00589 Phage integrase family BJD12_RS03160 PF01381 Helix-turn-helix BJD12_RS03180 PF01584 CheW-like domain BJD12_RS03185 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS03185 PF02203 Tar ligand binding domain homologue BJD12_RS03185 PF00672 HAMP domain BJD12_RS03190 PF02245 Methylpurine-DNA glycosylase (MPG) BJD12_RS03195 PF08494 DEAD/H associated BJD12_RS03195 PF00271 Helicase conserved C-terminal domain BJD12_RS03195 PF00270 DEAD/DEAH box helicase BJD12_RS03210 PF04386 Stringent starvation protein B BJD12_RS03215 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS03215 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS03220 PF02167 Cytochrome C1 family BJD12_RS03225 PF00033 Cytochrome b/b6/petB BJD12_RS03225 PF00032 Cytochrome b(C-terminal)/b6/petD BJD12_RS03230 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal BJD12_RS03230 PF00355 Rieske [2Fe-2S] domain BJD12_RS03235 PF01464 Transglycosylase SLT domain BJD12_RS03250 PF04055 Radical SAM superfamily BJD12_RS03250 PF00919 Uncharacterized protein family UPF0004 BJD12_RS03250 PF01938 TRAM domain BJD12_RS03255 PF02562 PhoH-like protein BJD12_RS03265 PF02130 Uncharacterized protein family UPF0054 BJD12_RS03275 PF00571 CBS domain BJD12_RS03275 PF03471 Transporter associated domain BJD12_RS03290 PF00171 Aldehyde dehydrogenase family BJD12_RS03300 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS03310 PF08402 TOBE domain BJD12_RS03310 PF00005 ABC transporter BJD12_RS03315 PF02321 Outer membrane efflux protein BJD12_RS03320 PF07690 Major Facilitator Superfamily BJD12_RS03325 PF13533 Biotin-lipoyl like BJD12_RS03330 PF13416 Bacterial extracellular solute-binding protein BJD12_RS03335 PF00202 Aminotransferase class-III BJD12_RS03345 PF00120 Glutamine synthetase, catalytic domain BJD12_RS03350 PF07722 Peptidase C26 BJD12_RS03355 PF00120 Glutamine synthetase, catalytic domain BJD12_RS03360 PF01266 FAD dependent oxidoreductase BJD12_RS03365 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS03365 PF00072 Response regulator receiver domain BJD12_RS03375 PF01814 Hemerythrin HHE cation binding domain BJD12_RS03380 PF00083 Sugar (and other) transporter BJD12_RS03380 PF07690 Major Facilitator Superfamily BJD12_RS03395 PF00384 Molybdopterin oxidoreductase BJD12_RS03400 PF02634 FdhD/NarQ family BJD12_RS03405 PF07690 Major Facilitator Superfamily BJD12_RS03410 PF00202 Aminotransferase class-III BJD12_RS03420 PF04286 Protein of unknown function (DUF445) BJD12_RS03425 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD12_RS03425 PF00072 Response regulator receiver domain BJD12_RS03425 PF01627 Hpt domain BJD12_RS03425 PF00672 HAMP domain BJD12_RS03425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS03425 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS03430 PF00072 Response regulator receiver domain BJD12_RS03435 PF07690 Major Facilitator Superfamily BJD12_RS03440 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS03445 PF00106 short chain dehydrogenase BJD12_RS03450 PF05088 Bacterial NAD-glutamate dehydrogenase BJD12_RS03460 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS03460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS03465 PF00873 AcrB/AcrD/AcrF family BJD12_RS03480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD12_RS03480 PF00381 PTS HPr component phosphorylation site BJD12_RS03480 PF02896 PEP-utilising enzyme, TIM barrel domain BJD12_RS03480 PF00391 PEP-utilising enzyme, mobile domain BJD12_RS03480 PF05524 PEP-utilising enzyme, N-terminal BJD12_RS03485 PF00294 pfkB family carbohydrate kinase BJD12_RS03490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BJD12_RS03570 PF07549 SecD/SecF GG Motif BJD12_RS03570 PF02355 Protein export membrane protein BJD12_RS03575 PF02355 Protein export membrane protein BJD12_RS03575 PF07549 SecD/SecF GG Motif BJD12_RS03575 PF13721 SecD export protein N-terminal TM region BJD12_RS03580 PF02699 Preprotein translocase subunit BJD12_RS03585 PF01702 Queuine tRNA-ribosyltransferase BJD12_RS03590 PF02547 Queuosine biosynthesis protein BJD12_RS03630 PF02927 Cellulase N-terminal ig-like domain BJD12_RS03630 PF00759 Glycosyl hydrolase family 9 BJD12_RS03640 PF00037 4Fe-4S binding domain BJD12_RS03655 PF01467 Cytidylyltransferase-like BJD12_RS03665 PF00183 Hsp90 protein BJD12_RS03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS03685 PF00593 TonB dependent receptor BJD12_RS03685 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS03695 PF00082 Subtilase family BJD12_RS03695 PF09286 Pro-kumamolisin, activation domain BJD12_RS03715 PF13520 Amino acid permease BJD12_RS03730 PF00557 Metallopeptidase family M24 BJD12_RS03730 PF01321 Creatinase/Prolidase N-terminal domain BJD12_RS03735 PF00171 Aldehyde dehydrogenase family BJD12_RS03740 PF00701 Dihydrodipicolinate synthetase family BJD12_RS03745 PF04324 BFD-like [2Fe-2S] binding domain BJD12_RS03745 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS03755 PF01266 FAD dependent oxidoreductase BJD12_RS03760 PF05544 Proline racemase BJD12_RS03770 PF00448 SRP54-type protein, GTPase domain BJD12_RS03770 PF02881 SRP54-type protein, helical bundle domain BJD12_RS03780 PF14815 NUDIX domain BJD12_RS03780 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD12_RS03780 PF00633 Helix-hairpin-helix motif BJD12_RS03785 PF04362 Bacterial Fe(2+) trafficking BJD12_RS03795 PF00072 Response regulator receiver domain BJD12_RS03795 PF13426 PAS domain BJD12_RS03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS03800 PF13649 Methyltransferase domain BJD12_RS03840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD12_RS03840 PF02770 Acyl-CoA dehydrogenase, middle domain BJD12_RS03840 PF12806 Acetyl-CoA dehydrogenase C-terminal like BJD12_RS03840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD12_RS03850 PF02779 Transketolase, pyrimidine binding domain BJD12_RS03850 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BJD12_RS03850 PF02780 Transketolase, C-terminal domain BJD12_RS03870 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BJD12_RS03880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD12_RS03880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD12_RS03900 PF03808 Glycosyl transferase WecB/TagA/CpsF family BJD12_RS03915 PF14667 Polysaccharide biosynthesis C-terminal domain BJD12_RS03925 PF00534 Glycosyl transferases group 1 BJD12_RS03925 PF13439 Glycosyltransferase Family 4 BJD12_RS03945 PF02397 Bacterial sugar transferase BJD12_RS03965 PF13411 MerR HTH family regulatory protein BJD12_RS03970 PF00216 Bacterial DNA-binding protein BJD12_RS03975 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BJD12_RS03975 PF01588 Putative tRNA binding domain BJD12_RS03975 PF03147 Ferredoxin-fold anticodon binding domain BJD12_RS03975 PF03484 tRNA synthetase B5 domain BJD12_RS03975 PF03483 B3/4 domain BJD12_RS03980 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BJD12_RS03980 PF01409 tRNA synthetases class II core domain (F) BJD12_RS03985 PF00453 Ribosomal protein L20 BJD12_RS03990 PF01632 Ribosomal protein L35 BJD12_RS03995 PF00707 Translation initiation factor IF-3, C-terminal domain BJD12_RS03995 PF05198 Translation initiation factor IF-3, N-terminal domain BJD12_RS04000 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD12_RS04000 PF02824 TGS domain BJD12_RS04000 PF03129 Anticodon binding domain BJD12_RS04000 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD12_RS04005 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS04010 PF00686 Starch binding domain BJD12_RS04010 PF00128 Alpha amylase, catalytic domain BJD12_RS04015 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BJD12_RS04025 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BJD12_RS04025 PF10566 Glycoside hydrolase 97 BJD12_RS04025 PF14508 Glycosyl-hydrolase 97 N-terminal BJD12_RS04040 PF00128 Alpha amylase, catalytic domain BJD12_RS04050 PF01527 Transposase BJD12_RS04090 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BJD12_RS04095 PF05101 Type IV secretory pathway, VirB3-like protein BJD12_RS04105 PF01464 Transglycosylase SLT domain BJD12_RS04110 PF00437 Type II/IV secretion system protein BJD12_RS04115 PF03743 Bacterial conjugation TrbI-like protein BJD12_RS04135 PF02534 Type IV secretory system Conjugative DNA transfer BJD12_RS04150 PF17757 UvrB interaction domain BJD12_RS04150 PF00271 Helicase conserved C-terminal domain BJD12_RS04150 PF12344 Ultra-violet resistance protein B BJD12_RS04150 PF02151 UvrB/uvrC motif BJD12_RS04150 PF04851 Type III restriction enzyme, res subunit BJD12_RS04165 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS04165 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor BJD12_RS04170 PF05567 Neisseria PilC beta-propeller domain BJD12_RS04195 PF00114 Pilin (bacterial filament) BJD12_RS04195 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS04200 PF06580 Histidine kinase BJD12_RS04200 PF07694 5TMR of 5TMR-LYT BJD12_RS04205 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BJD12_RS04205 PF03641 Possible lysine decarboxylase BJD12_RS04205 PF11892 Domain of unknown function (DUF3412) BJD12_RS04210 PF00593 TonB dependent receptor BJD12_RS04215 PF01914 MarC family integral membrane protein BJD12_RS04225 PF00462 Glutaredoxin BJD12_RS04230 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BJD12_RS04230 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BJD12_RS04235 PF02222 ATP-grasp domain BJD12_RS04235 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BJD12_RS04240 PF00731 AIR carboxylase BJD12_RS04250 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BJD12_RS04250 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BJD12_RS04260 PF03725 3' exoribonuclease family, domain 2 BJD12_RS04260 PF01138 3' exoribonuclease family, domain 1 BJD12_RS04260 PF00575 S1 RNA binding domain BJD12_RS04260 PF00013 KH domain BJD12_RS04260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BJD12_RS04265 PF00312 Ribosomal protein S15 BJD12_RS04270 PF01509 TruB family pseudouridylate synthase (N terminal domain) BJD12_RS04270 PF09157 Pseudouridine synthase II TruB, C-terminal BJD12_RS04270 PF16198 tRNA pseudouridylate synthase B C-terminal domain BJD12_RS04275 PF02033 Ribosome-binding factor A BJD12_RS04280 PF00009 Elongation factor Tu GTP binding domain BJD12_RS04280 PF08364 Bacterial translation initiation factor IF-2 associated region BJD12_RS04280 PF04760 Translation initiation factor IF-2, N-terminal region BJD12_RS04280 PF11987 Translation-initiation factor 2 BJD12_RS04285 PF13184 NusA-like KH domain BJD12_RS04285 PF08529 NusA N-terminal domain BJD12_RS04285 PF00575 S1 RNA binding domain BJD12_RS04290 PF02576 RimP N-terminal domain BJD12_RS04290 PF17384 RimP C-terminal SH3 domain BJD12_RS04300 PF00361 Proton-conducting membrane transporter BJD12_RS04305 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus BJD12_RS04305 PF00361 Proton-conducting membrane transporter BJD12_RS04310 PF00361 Proton-conducting membrane transporter BJD12_RS04310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJD12_RS04315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BJD12_RS04320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BJD12_RS04325 PF12838 4Fe-4S dicluster domain BJD12_RS04330 PF00146 NADH dehydrogenase BJD12_RS04335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BJD12_RS04335 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal BJD12_RS04335 PF00384 Molybdopterin oxidoreductase BJD12_RS04340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BJD12_RS04340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BJD12_RS04340 PF10531 SLBB domain BJD12_RS04350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BJD12_RS04355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BJD12_RS04360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BJD12_RS04365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BJD12_RS04380 PF00121 Triosephosphate isomerase BJD12_RS04385 PF00106 short chain dehydrogenase BJD12_RS04405 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS04405 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS04405 PF00563 EAL domain BJD12_RS04420 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD12_RS04420 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD12_RS04420 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD12_RS04420 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD12_RS04425 PF01039 Carboxyl transferase domain BJD12_RS04425 PF17848 Acetyl-coA carboxylase zinc finger domain BJD12_RS04430 PF00290 Tryptophan synthase alpha chain BJD12_RS04440 PF00291 Pyridoxal-phosphate dependent enzyme BJD12_RS04445 PF03466 LysR substrate binding domain BJD12_RS04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS04450 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BJD12_RS04455 PF01416 tRNA pseudouridine synthase BJD12_RS04470 PF02774 Semialdehyde dehydrogenase, dimerisation domain BJD12_RS04470 PF01118 Semialdehyde dehydrogenase, NAD binding domain BJD12_RS04475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD12_RS04475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD12_RS04480 PF01264 Chorismate synthase BJD12_RS04490 PF05175 Methyltransferase small domain BJD12_RS04495 PF02630 SCO1/SenC BJD12_RS04500 PF02666 Phosphatidylserine decarboxylase BJD12_RS04510 PF06737 Transglycosylase-like domain BJD12_RS04515 PF05872 Bacterial protein of unknown function (DUF853) BJD12_RS04525 PF00293 NUDIX domain BJD12_RS04555 PF03449 Transcription elongation factor, N-terminal BJD12_RS04555 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD12_RS04560 PF00919 Uncharacterized protein family UPF0004 BJD12_RS04560 PF18693 TRAM domain BJD12_RS04560 PF04055 Radical SAM superfamily BJD12_RS04565 PF01738 Dienelactone hydrolase family BJD12_RS04585 PF00692 dUTPase BJD12_RS04595 PF10609 NUBPL iron-transfer P-loop NTPase BJD12_RS04600 PF00593 TonB dependent receptor BJD12_RS04600 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS04615 PF05649 Peptidase family M13 BJD12_RS04615 PF01431 Peptidase family M13 BJD12_RS04620 PF05649 Peptidase family M13 BJD12_RS04620 PF01431 Peptidase family M13 BJD12_RS04640 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD12_RS04640 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS04645 PF01266 FAD dependent oxidoreductase BJD12_RS04650 PF04235 Protein of unknown function (DUF418) BJD12_RS04655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD12_RS04660 PF00877 NlpC/P60 family BJD12_RS04665 PF00877 NlpC/P60 family BJD12_RS04690 PF02954 Bacterial regulatory protein, Fis family BJD12_RS04690 PF00072 Response regulator receiver domain BJD12_RS04690 PF00158 Sigma-54 interaction domain BJD12_RS04695 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS04695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS04710 PF08241 Methyltransferase domain BJD12_RS04715 PF00375 Sodium:dicarboxylate symporter family BJD12_RS04720 PF00245 Alkaline phosphatase BJD12_RS04725 PF09179 TilS substrate binding domain BJD12_RS04725 PF11734 TilS substrate C-terminal domain BJD12_RS04725 PF01171 PP-loop family BJD12_RS04730 PF02609 Exonuclease VII small subunit BJD12_RS04735 PF00348 Polyprenyl synthetase BJD12_RS04745 PF14521 Lysine-specific metallo-endopeptidase BJD12_RS04755 PF01523 Putative modulator of DNA gyrase BJD12_RS04760 PF04751 Protein of unknown function (DUF615) BJD12_RS04765 PF01523 Putative modulator of DNA gyrase BJD12_RS04780 PF00575 S1 RNA binding domain BJD12_RS04780 PF10150 Ribonuclease E/G family BJD12_RS04785 PF02545 Maf-like protein BJD12_RS04790 PF04402 Protein of unknown function (DUF541) BJD12_RS04805 PF02590 Predicted SPOUT methyltransferase BJD12_RS04820 PF01467 Cytidylyltransferase-like BJD12_RS04835 PF13603 Leucyl-tRNA synthetase, Domain 2 BJD12_RS04835 PF00133 tRNA synthetases class I (I, L, M and V) BJD12_RS04835 PF08264 Anticodon-binding domain of tRNA BJD12_RS04845 PF00085 Thioredoxin BJD12_RS04855 PF04070 Domain of unknown function (DUF378) BJD12_RS04870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS04870 PF03466 LysR substrate binding domain BJD12_RS04875 PF01022 Bacterial regulatory protein, arsR family BJD12_RS04910 PF00005 ABC transporter BJD12_RS04910 PF00664 ABC transporter transmembrane region BJD12_RS04920 PF00999 Sodium/hydrogen exchanger family BJD12_RS04925 PF07930 D-aminopeptidase, domain B BJD12_RS04925 PF00144 Beta-lactamase BJD12_RS04930 PF03737 Aldolase/RraA BJD12_RS04935 PF00733 Asparagine synthase BJD12_RS04935 PF13537 Glutamine amidotransferase domain BJD12_RS04950 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS04955 PF00849 RNA pseudouridylate synthase BJD12_RS04955 PF01479 S4 domain BJD12_RS04960 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS04960 PF00563 EAL domain BJD12_RS04960 PF08448 PAS fold BJD12_RS04965 PF03880 DbpA RNA binding domain BJD12_RS04965 PF00270 DEAD/DEAH box helicase BJD12_RS04965 PF00271 Helicase conserved C-terminal domain BJD12_RS04980 PF01494 FAD binding domain BJD12_RS05010 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD12_RS05010 PF06029 AlkA N-terminal domain BJD12_RS05015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BJD12_RS05015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BJD12_RS05025 PF00654 Voltage gated chloride channel BJD12_RS05040 PF00593 TonB dependent receptor BJD12_RS05040 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS05050 PF00082 Subtilase family BJD12_RS05050 PF01483 Proprotein convertase P-domain BJD12_RS05080 PF00082 Subtilase family BJD12_RS05080 PF01483 Proprotein convertase P-domain BJD12_RS05090 PF00248 Aldo/keto reductase family BJD12_RS05095 PF07690 Major Facilitator Superfamily BJD12_RS05100 PF03466 LysR substrate binding domain BJD12_RS05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS05110 PF06719 AraC-type transcriptional regulator N-terminus BJD12_RS05110 PF12833 Helix-turn-helix domain BJD12_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS05120 PF03466 LysR substrate binding domain BJD12_RS05125 PF00248 Aldo/keto reductase family BJD12_RS05130 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS05130 PF16859 Tetracyclin repressor-like, C-terminal domain BJD12_RS05135 PF02321 Outer membrane efflux protein BJD12_RS05140 PF00873 AcrB/AcrD/AcrF family BJD12_RS05145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS05145 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS05155 PF01475 Ferric uptake regulator family BJD12_RS05160 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD12_RS05185 PF06123 Inner membrane protein CreD BJD12_RS05190 PF00672 HAMP domain BJD12_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS05190 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS05195 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS05195 PF00072 Response regulator receiver domain BJD12_RS05200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BJD12_RS05220 PF02559 CarD-like/TRCF domain BJD12_RS05220 PF00270 DEAD/DEAH box helicase BJD12_RS05220 PF03461 TRCF domain BJD12_RS05220 PF17757 UvrB interaction domain BJD12_RS05220 PF00271 Helicase conserved C-terminal domain BJD12_RS05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS05230 PF02895 Signal transducing histidine kinase, homodimeric domain BJD12_RS05230 PF01627 Hpt domain BJD12_RS05230 PF09078 CheY binding BJD12_RS05230 PF01584 CheW-like domain BJD12_RS05240 PF02203 Tar ligand binding domain homologue BJD12_RS05240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS05240 PF00672 HAMP domain BJD12_RS05245 PF01584 CheW-like domain BJD12_RS05250 PF00563 EAL domain BJD12_RS05250 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS05250 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS05255 PF03705 CheR methyltransferase, all-alpha domain BJD12_RS05255 PF01739 CheR methyltransferase, SAM binding domain BJD12_RS05260 PF01339 CheB methylesterase BJD12_RS05260 PF00072 Response regulator receiver domain BJD12_RS05270 PF13091 PLD-like domain BJD12_RS05275 PF01431 Peptidase family M13 BJD12_RS05275 PF05649 Peptidase family M13 BJD12_RS05285 PF00300 Histidine phosphatase superfamily (branch 1) BJD12_RS05290 PF04493 Endonuclease V BJD12_RS05305 PF02678 Pirin BJD12_RS05305 PF05726 Pirin C-terminal cupin domain BJD12_RS05320 PF05726 Pirin C-terminal cupin domain BJD12_RS05320 PF02678 Pirin BJD12_RS05325 PF02554 Carbon starvation protein CstA BJD12_RS05325 PF13722 5TM C-terminal transporter carbon starvation CstA BJD12_RS05330 PF04328 Selenoprotein, putative BJD12_RS05365 PF12804 MobA-like NTP transferase domain BJD12_RS05370 PF13478 XdhC Rossmann domain BJD12_RS05370 PF02625 XdhC and CoxI family BJD12_RS05375 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD12_RS05375 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BJD12_RS05385 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD12_RS05385 PF01799 [2Fe-2S] binding domain BJD12_RS05385 PF10518 TAT (twin-arginine translocation) pathway signal sequence BJD12_RS05390 PF00698 Acyl transferase domain BJD12_RS05390 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS05390 PF00107 Zinc-binding dehydrogenase BJD12_RS05390 PF16197 Ketoacyl-synthetase C-terminal extension BJD12_RS05390 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS05390 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS05390 PF08659 KR domain BJD12_RS05390 PF00550 Phosphopantetheine attachment site BJD12_RS05390 PF14765 Polyketide synthase dehydratase BJD12_RS05400 PF00436 Single-strand binding protein family BJD12_RS05405 PF00348 Polyprenyl synthetase BJD12_RS05415 PF08245 Mur ligase middle domain BJD12_RS05415 PF02875 Mur ligase family, glutamate ligase domain BJD12_RS05430 PF01842 ACT domain BJD12_RS05430 PF00696 Amino acid kinase family BJD12_RS05435 PF02567 Phenazine biosynthesis-like protein BJD12_RS05440 PF02567 Phenazine biosynthesis-like protein BJD12_RS05450 PF02566 OsmC-like protein BJD12_RS05455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BJD12_RS05455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BJD12_RS05460 PF03652 Holliday junction resolvase BJD12_RS05465 PF02622 Uncharacterized ACR, COG1678 BJD12_RS05470 PF13687 Domain of unknown function (DUF4153) BJD12_RS05475 PF00117 Glutamine amidotransferase class-I BJD12_RS05475 PF03352 Methyladenine glycosylase BJD12_RS05475 PF13302 Acetyltransferase (GNAT) domain BJD12_RS05475 PF00958 GMP synthase C terminal domain BJD12_RS05475 PF13673 Acetyltransferase (GNAT) domain BJD12_RS05495 PF00437 Type II/IV secretion system protein BJD12_RS05500 PF00437 Type II/IV secretion system protein BJD12_RS05505 PF01168 Alanine racemase, N-terminal domain BJD12_RS05510 PF03807 NADP oxidoreductase coenzyme F420-dependent BJD12_RS05510 PF14748 Pyrroline-5-carboxylate reductase dimerisation BJD12_RS05520 PF01476 LysM domain BJD12_RS05520 PF01551 Peptidase family M23 BJD12_RS05540 PF01965 DJ-1/PfpI family BJD12_RS05550 PF02082 Transcriptional regulator BJD12_RS05555 PF01458 Uncharacterized protein family (UPF0051) BJD12_RS05560 PF00005 ABC transporter BJD12_RS05565 PF01458 Uncharacterized protein family (UPF0051) BJD12_RS05570 PF00266 Aminotransferase class-V BJD12_RS05575 PF00583 Acetyltransferase (GNAT) family BJD12_RS05580 PF00355 Rieske [2Fe-2S] domain BJD12_RS05585 PF00593 TonB dependent receptor BJD12_RS05585 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS05590 PF13640 2OG-Fe(II) oxygenase superfamily BJD12_RS05590 PF18331 PKHD-type hydroxylase C-terminal domain BJD12_RS05620 PF02424 ApbE family BJD12_RS05625 PF00667 FAD binding domain BJD12_RS05625 PF00258 Flavodoxin BJD12_RS05625 PF00175 Oxidoreductase NAD-binding domain BJD12_RS05640 PF01546 Peptidase family M20/M25/M40 BJD12_RS05640 PF07687 Peptidase dimerisation domain BJD12_RS05650 PF01636 Phosphotransferase enzyme family BJD12_RS05655 PF00483 Nucleotidyl transferase BJD12_RS05660 PF00308 Bacterial dnaA protein BJD12_RS05665 PF01594 AI-2E family transporter BJD12_RS05675 PF00586 AIR synthase related protein, N-terminal domain BJD12_RS05675 PF02769 AIR synthase related protein, C-terminal domain BJD12_RS05690 PF00551 Formyl transferase BJD12_RS05720 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJD12_RS05730 PF01380 SIS domain BJD12_RS05730 PF00571 CBS domain BJD12_RS05745 PF03968 OstA-like protein BJD12_RS05750 PF00005 ABC transporter BJD12_RS05755 PF04552 Sigma-54, DNA binding domain BJD12_RS05755 PF04963 Sigma-54 factor, core binding domain BJD12_RS05755 PF00309 Sigma-54 factor, Activator interacting domain (AID) BJD12_RS05760 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BJD12_RS05765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BJD12_RS05770 PF02603 HPr Serine kinase N terminus BJD12_RS05770 PF07475 HPr Serine kinase C-terminal domain BJD12_RS05775 PF03668 P-loop ATPase protein family BJD12_RS05785 PF00381 PTS HPr component phosphorylation site BJD12_RS05790 PF05524 PEP-utilising enzyme, N-terminal BJD12_RS05790 PF00391 PEP-utilising enzyme, mobile domain BJD12_RS05790 PF02896 PEP-utilising enzyme, TIM barrel domain BJD12_RS05795 PF03448 MgtE intracellular N domain BJD12_RS05795 PF01769 Divalent cation transporter BJD12_RS05795 PF00571 CBS domain BJD12_RS05800 PF00756 Putative esterase BJD12_RS05805 PF02322 Cytochrome bd terminal oxidase subunit II BJD12_RS05810 PF01654 Cytochrome bd terminal oxidase subunit I BJD12_RS05815 PF00324 Amino acid permease BJD12_RS05820 PF00544 Pectate lyase BJD12_RS05830 PF00561 alpha/beta hydrolase fold BJD12_RS05835 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS05840 PF00324 Amino acid permease BJD12_RS05865 PF04820 Tryptophan halogenase BJD12_RS05895 PF09278 MerR, DNA binding BJD12_RS05895 PF00376 MerR family regulatory protein BJD12_RS05900 PF07690 Major Facilitator Superfamily BJD12_RS05910 PF03738 Glutathionylspermidine synthase preATP-grasp BJD12_RS05935 PF04012 PspA/IM30 family BJD12_RS05945 PF00583 Acetyltransferase (GNAT) family BJD12_RS05950 PF01243 Pyridoxamine 5'-phosphate oxidase BJD12_RS05950 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BJD12_RS05955 PF01202 Shikimate kinase BJD12_RS05960 PF01761 3-dehydroquinate synthase BJD12_RS05970 PF01208 Uroporphyrinogen decarboxylase (URO-D) BJD12_RS05975 PF07690 Major Facilitator Superfamily BJD12_RS05980 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS05980 PF00672 HAMP domain BJD12_RS05980 PF00072 Response regulator receiver domain BJD12_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS05980 PF01627 Hpt domain BJD12_RS05980 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD12_RS05985 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS05985 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD12_RS05985 PF01627 Hpt domain BJD12_RS05985 PF00072 Response regulator receiver domain BJD12_RS05985 PF00672 HAMP domain BJD12_RS05985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS05990 PF01627 Hpt domain BJD12_RS05990 PF00072 Response regulator receiver domain BJD12_RS05990 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD12_RS05990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS05990 PF00672 HAMP domain BJD12_RS05990 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS05995 PF04264 YceI-like domain BJD12_RS06010 PF00313 'Cold-shock' DNA-binding domain BJD12_RS06025 PF03313 Serine dehydratase alpha chain BJD12_RS06025 PF03315 Serine dehydratase beta chain BJD12_RS06030 PF12697 Alpha/beta hydrolase family BJD12_RS06035 PF03447 Homoserine dehydrogenase, NAD binding domain BJD12_RS06035 PF00742 Homoserine dehydrogenase BJD12_RS06035 PF00696 Amino acid kinase family BJD12_RS06040 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD12_RS06045 PF00561 alpha/beta hydrolase fold BJD12_RS06050 PF01476 LysM domain BJD12_RS06050 PF01551 Peptidase family M23 BJD12_RS06050 PF08525 Opacity-associated protein A N-terminal motif BJD12_RS06055 PF00009 Elongation factor Tu GTP binding domain BJD12_RS06055 PF16658 Class II release factor RF3, C-terminal domain BJD12_RS06060 PF03006 Haemolysin-III related BJD12_RS06065 PF05170 AsmA family BJD12_RS06075 PF00571 CBS domain BJD12_RS06075 PF00478 IMP dehydrogenase / GMP reductase domain BJD12_RS06080 PF00535 Glycosyl transferase family 2 BJD12_RS06085 PF00912 Transglycosylase BJD12_RS06090 PF01430 Hsp33 protein BJD12_RS06100 PF00593 TonB dependent receptor BJD12_RS06100 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06105 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS06110 PF00561 alpha/beta hydrolase fold BJD12_RS06115 PF02770 Acyl-CoA dehydrogenase, middle domain BJD12_RS06115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD12_RS06115 PF09317 Domain of unknown function (DUF1974) BJD12_RS06115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD12_RS06145 PF01597 Glycine cleavage H-protein BJD12_RS06150 PF08669 Glycine cleavage T-protein C-terminal barrel domain BJD12_RS06150 PF01571 Aminomethyltransferase folate-binding domain BJD12_RS06160 PF16200 C-terminal region of band_7 BJD12_RS06160 PF01145 SPFH domain / Band 7 family BJD12_RS06165 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BJD12_RS06170 PF03819 MazG nucleotide pyrophosphohydrolase domain BJD12_RS06175 PF00459 Inositol monophosphatase family BJD12_RS06180 PF00293 NUDIX domain BJD12_RS06185 PF00202 Aminotransferase class-III BJD12_RS06190 PF04452 RNA methyltransferase BJD12_RS06195 PF02685 Glucokinase BJD12_RS06210 PF00704 Glycosyl hydrolases family 18 BJD12_RS06210 PF01476 LysM domain BJD12_RS06230 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS06230 PF07691 PA14 domain BJD12_RS06230 PF14310 Fibronectin type III-like domain BJD12_RS06230 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD12_RS06240 PF07971 Glycosyl hydrolase family 92 BJD12_RS06240 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD12_RS06245 PF01301 Glycosyl hydrolases family 35 BJD12_RS06280 PF03932 CutC family BJD12_RS06285 PF01112 Asparaginase BJD12_RS06290 PF12034 Domain of unknown function (DUF3520) BJD12_RS06290 PF00092 von Willebrand factor type A domain BJD12_RS06290 PF12450 von Willebrand factor BJD12_RS06305 PF13302 Acetyltransferase (GNAT) domain BJD12_RS06320 PF01627 Hpt domain BJD12_RS06320 PF02895 Signal transducing histidine kinase, homodimeric domain BJD12_RS06320 PF01584 CheW-like domain BJD12_RS06320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS06320 PF00072 Response regulator receiver domain BJD12_RS06325 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BJD12_RS06325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS06330 PF01584 CheW-like domain BJD12_RS06335 PF00072 Response regulator receiver domain BJD12_RS06340 PF00072 Response regulator receiver domain BJD12_RS06345 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BJD12_RS06345 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BJD12_RS06355 PF03747 ADP-ribosylglycohydrolase BJD12_RS06360 PF00814 Glycoprotease family BJD12_RS06365 PF04851 Type III restriction enzyme, res subunit BJD12_RS06365 PF13307 Helicase C-terminal domain BJD12_RS06375 PF00905 Penicillin binding protein transpeptidase domain BJD12_RS06375 PF00912 Transglycosylase BJD12_RS06375 PF14814 Bifunctional transglycosylase second domain BJD12_RS06380 PF00535 Glycosyl transferase family 2 BJD12_RS06390 PF13291 ACT domain BJD12_RS06390 PF04607 Region found in RelA / SpoT proteins BJD12_RS06390 PF02824 TGS domain BJD12_RS06395 PF08042 PqqA family BJD12_RS06400 PF12706 Beta-lactamase superfamily domain BJD12_RS06405 PF03070 TENA/THI-4/PQQC family BJD12_RS06410 PF05402 Coenzyme PQQ synthesis protein D (PqqD) BJD12_RS06430 PF02685 Glucokinase BJD12_RS06440 PF00270 DEAD/DEAH box helicase BJD12_RS06440 PF11898 Domain of unknown function (DUF3418) BJD12_RS06440 PF04408 Helicase associated domain (HA2) BJD12_RS06440 PF00271 Helicase conserved C-terminal domain BJD12_RS06440 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BJD12_RS06445 PF00210 Ferritin-like domain BJD12_RS06450 PF00270 DEAD/DEAH box helicase BJD12_RS06450 PF09382 RQC domain BJD12_RS06450 PF00271 Helicase conserved C-terminal domain BJD12_RS06450 PF00570 HRDC domain BJD12_RS06450 PF16124 RecQ zinc-binding BJD12_RS06470 PF01479 S4 domain BJD12_RS06470 PF00849 RNA pseudouridylate synthase BJD12_RS06480 PF00672 HAMP domain BJD12_RS06480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS06480 PF02203 Tar ligand binding domain homologue BJD12_RS06505 PF06508 Queuosine biosynthesis protein QueC BJD12_RS06510 PF04055 Radical SAM superfamily BJD12_RS06520 PF00691 OmpA family BJD12_RS06525 PF07676 WD40-like Beta Propeller Repeat BJD12_RS06525 PF04052 TolB amino-terminal domain BJD12_RS06535 PF02472 Biopolymer transport protein ExbD/TolR BJD12_RS06540 PF01618 MotA/TolQ/ExbB proton channel family BJD12_RS06545 PF03061 Thioesterase superfamily BJD12_RS06550 PF05496 Holliday junction DNA helicase RuvB P-loop domain BJD12_RS06550 PF05491 RuvB C-terminal winged helix domain BJD12_RS06550 PF17864 RuvB AAA lid domain BJD12_RS06560 PF02705 K+ potassium transporter BJD12_RS06565 PF07499 RuvA, C-terminal domain BJD12_RS06565 PF01330 RuvA N terminal domain BJD12_RS06570 PF02075 Crossover junction endodeoxyribonuclease RuvC BJD12_RS06575 PF01709 Transcriptional regulator BJD12_RS06590 PF02938 GAD domain BJD12_RS06590 PF00152 tRNA synthetases class II (D, K and N) BJD12_RS06590 PF01336 OB-fold nucleic acid binding domain BJD12_RS06610 PF07690 Major Facilitator Superfamily BJD12_RS06620 PF04143 Sulphur transport BJD12_RS06625 PF00753 Metallo-beta-lactamase superfamily BJD12_RS06635 PF01925 Sulfite exporter TauE/SafE BJD12_RS06650 PF05506 Domain of unknown function (DUF756) BJD12_RS06650 PF04185 Phosphoesterase family BJD12_RS06655 PF07859 alpha/beta hydrolase fold BJD12_RS06655 PF13472 GDSL-like Lipase/Acylhydrolase family BJD12_RS06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS06665 PF03466 LysR substrate binding domain BJD12_RS06670 PF13406 Transglycosylase SLT domain BJD12_RS06680 PF00005 ABC transporter BJD12_RS06680 PF12848 ABC transporter BJD12_RS06685 PF00593 TonB dependent receptor BJD12_RS06685 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06695 PF00593 TonB dependent receptor BJD12_RS06695 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06700 PF00593 TonB dependent receptor BJD12_RS06700 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06705 PF00067 Cytochrome P450 BJD12_RS06715 PF02254 TrkA-N domain BJD12_RS06715 PF00999 Sodium/hydrogen exchanger family BJD12_RS06720 PF03328 HpcH/HpaI aldolase/citrate lyase family BJD12_RS06725 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06725 PF07660 Secretin and TonB N terminus short domain BJD12_RS06725 PF00593 TonB dependent receptor BJD12_RS06735 PF06276 Ferric iron reductase FhuF-like transporter BJD12_RS06735 PF04183 IucA / IucC family BJD12_RS06740 PF07690 Major Facilitator Superfamily BJD12_RS06745 PF04183 IucA / IucC family BJD12_RS06745 PF06276 Ferric iron reductase FhuF-like transporter BJD12_RS06750 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD12_RS06750 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BJD12_RS06760 PF02654 Cobalamin-5-phosphate synthase BJD12_RS06770 PF02277 Phosphoribosyltransferase BJD12_RS06775 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase BJD12_RS06780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJD12_RS06780 PF07685 CobB/CobQ-like glutamine amidotransferase domain BJD12_RS06785 PF00155 Aminotransferase class I and II BJD12_RS06790 PF17113 Regulatory signalling modulator protein AmpE BJD12_RS06790 PF03186 CobD/Cbib protein BJD12_RS06795 PF12557 Cob(I)alamin adenosyltransferase N terminal BJD12_RS06795 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BJD12_RS06810 PF00593 TonB dependent receptor BJD12_RS06810 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06815 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD12_RS06820 PF17871 AAA lid domain BJD12_RS06820 PF10431 C-terminal, D2-small domain, of ClpB protein BJD12_RS06820 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS06820 PF02861 Clp amino terminal domain, pathogenicity island component BJD12_RS06820 PF07724 AAA domain (Cdc48 subfamily) BJD12_RS06825 PF01541 GIY-YIG catalytic domain BJD12_RS06860 PF00593 TonB dependent receptor BJD12_RS06860 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS06865 PF02358 Trehalose-phosphatase BJD12_RS06870 PF00723 Glycosyl hydrolases family 15 BJD12_RS06875 PF00982 Glycosyltransferase family 20 BJD12_RS06880 PF01011 PQQ enzyme repeat BJD12_RS06885 PF02203 Tar ligand binding domain homologue BJD12_RS06885 PF00672 HAMP domain BJD12_RS06885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS06900 PF02578 Multi-copper polyphenol oxidoreductase laccase BJD12_RS06905 PF00849 RNA pseudouridylate synthase BJD12_RS06910 PF13525 Outer membrane lipoprotein BJD12_RS06920 PF00795 Carbon-nitrogen hydrolase BJD12_RS06920 PF02540 NAD synthase BJD12_RS06935 PF00549 CoA-ligase BJD12_RS06935 PF08442 ATP-grasp domain BJD12_RS06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS06940 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS06945 PF00072 Response regulator receiver domain BJD12_RS06945 PF02954 Bacterial regulatory protein, Fis family BJD12_RS06945 PF00158 Sigma-54 interaction domain BJD12_RS06950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD12_RS06950 PF00437 Type II/IV secretion system protein BJD12_RS06955 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS06955 PF00114 Pilin (bacterial filament) BJD12_RS06960 PF00114 Pilin (bacterial filament) BJD12_RS06960 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS06965 PF00482 Type II secretion system (T2SS), protein F BJD12_RS06970 PF06750 Bacterial Peptidase A24 N-terminal domain BJD12_RS06970 PF01478 Type IV leader peptidase family BJD12_RS06975 PF01121 Dephospho-CoA kinase BJD12_RS06980 PF11808 Phosphate regulon sensor protein PhoR BJD12_RS06980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS06980 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS06980 PF00989 PAS fold BJD12_RS06985 PF00072 Response regulator receiver domain BJD12_RS06985 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS06995 PF08443 RimK-like ATP-grasp domain BJD12_RS06995 PF18030 RimK PreATP-grasp domain BJD12_RS07000 PF00128 Alpha amylase, catalytic domain BJD12_RS07000 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD12_RS07130 PF03793 PASTA domain BJD12_RS07130 PF00069 Protein kinase domain BJD12_RS07180 PF00657 GDSL-like Lipase/Acylhydrolase BJD12_RS07180 PF03797 Autotransporter beta-domain BJD12_RS07190 PF05690 Thiazole biosynthesis protein ThiG BJD12_RS07195 PF02390 Putative methyltransferase BJD12_RS07200 PF03600 Citrate transporter BJD12_RS07200 PF02080 TrkA-C domain BJD12_RS07215 PF01557 Fumarylacetoacetate (FAA) hydrolase family BJD12_RS07220 PF01741 Large-conductance mechanosensitive channel, MscL BJD12_RS07230 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS07240 PF00553 Cellulose binding domain BJD12_RS07240 PF00041 Fibronectin type III domain BJD12_RS07240 PF01341 Glycosyl hydrolases family 6 BJD12_RS07250 PF00703 Glycosyl hydrolases family 2 BJD12_RS07250 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain BJD12_RS07250 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD12_RS07255 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation BJD12_RS07255 PF14508 Glycosyl-hydrolase 97 N-terminal BJD12_RS07255 PF10566 Glycoside hydrolase 97 BJD12_RS07260 PF00135 Carboxylesterase family BJD12_RS07265 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJD12_RS07265 PF00588 SpoU rRNA Methylase family BJD12_RS07270 PF01235 Sodium:alanine symporter family BJD12_RS07280 PF01433 Peptidase family M1 domain BJD12_RS07280 PF11838 ERAP1-like C-terminal domain BJD12_RS07285 PF00873 AcrB/AcrD/AcrF family BJD12_RS07290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS07290 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS07295 PF00009 Elongation factor Tu GTP binding domain BJD12_RS07300 PF01507 Phosphoadenosine phosphosulfate reductase family BJD12_RS07305 PF00175 Oxidoreductase NAD-binding domain BJD12_RS07305 PF00258 Flavodoxin BJD12_RS07305 PF00667 FAD binding domain BJD12_RS07310 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BJD12_RS07310 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BJD12_RS07315 PF01507 Phosphoadenosine phosphosulfate reductase family BJD12_RS07335 PF01627 Hpt domain BJD12_RS07335 PF00672 HAMP domain BJD12_RS07335 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS07335 PF00072 Response regulator receiver domain BJD12_RS07335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS07345 PF03466 LysR substrate binding domain BJD12_RS07345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS07350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD12_RS07350 PF10414 Sirohaem synthase dimerisation region BJD12_RS07350 PF14824 Sirohaem biosynthesis protein central BJD12_RS07355 PF00291 Pyridoxal-phosphate dependent enzyme BJD12_RS07365 PF01661 Macro domain BJD12_RS07370 PF00274 Fructose-bisphosphate aldolase class-I BJD12_RS07380 PF00224 Pyruvate kinase, barrel domain BJD12_RS07380 PF02887 Pyruvate kinase, alpha/beta domain BJD12_RS07385 PF13419 Haloacid dehalogenase-like hydrolase BJD12_RS07390 PF00162 Phosphoglycerate kinase BJD12_RS07410 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BJD12_RS07410 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BJD12_RS07430 PF03922 OmpW family BJD12_RS07440 PF04273 Putative phosphatase (DUF442) BJD12_RS07440 PF00753 Metallo-beta-lactamase superfamily BJD12_RS07450 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS07455 PF00005 ABC transporter BJD12_RS07455 PF03459 TOBE domain BJD12_RS07470 PF03965 Penicillinase repressor BJD12_RS07490 PF03734 L,D-transpeptidase catalytic domain BJD12_RS07490 PF01476 LysM domain BJD12_RS07495 PF04225 Opacity-associated protein A LysM-like domain BJD12_RS07495 PF01551 Peptidase family M23 BJD12_RS07510 PF03466 LysR substrate binding domain BJD12_RS07510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS07515 PF00593 TonB dependent receptor BJD12_RS07515 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS07520 PF00456 Transketolase, thiamine diphosphate binding domain BJD12_RS07520 PF02780 Transketolase, C-terminal domain BJD12_RS07520 PF02779 Transketolase, pyrimidine binding domain BJD12_RS07525 PF00375 Sodium:dicarboxylate symporter family BJD12_RS07535 PF00092 von Willebrand factor type A domain BJD12_RS07535 PF07584 Aerotolerance regulator N-terminal BJD12_RS07555 PF07726 ATPase family associated with various cellular activities (AAA) BJD12_RS07555 PF17863 AAA lid domain BJD12_RS07560 PF07660 Secretin and TonB N terminus short domain BJD12_RS07560 PF03958 Bacterial type II/III secretion system short domain BJD12_RS07560 PF11741 AMIN domain BJD12_RS07560 PF00263 Bacterial type II and III secretion system protein BJD12_RS07565 PF04351 Pilus assembly protein, PilP BJD12_RS07570 PF04350 Pilus assembly protein, PilO BJD12_RS07575 PF05137 Fimbrial assembly protein (PilN) BJD12_RS07580 PF11104 Type IV pilus assembly protein PilM; BJD12_RS07585 PF00905 Penicillin binding protein transpeptidase domain BJD12_RS07585 PF00912 Transglycosylase BJD12_RS07585 PF17092 Penicillin-binding protein OB-like domain BJD12_RS07600 PF00285 Citrate synthase, C-terminal domain BJD12_RS07605 PF01197 Ribosomal protein L31 BJD12_RS07610 PF01156 Inosine-uridine preferring nucleoside hydrolase BJD12_RS07615 PF00271 Helicase conserved C-terminal domain BJD12_RS07615 PF17191 RecG wedge domain BJD12_RS07615 PF00270 DEAD/DEAH box helicase BJD12_RS07620 PF01042 Endoribonuclease L-PSP BJD12_RS07630 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BJD12_RS07630 PF08666 SAF domain BJD12_RS07635 PF03573 outer membrane porin, OprD family BJD12_RS07640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD12_RS07640 PF13378 Enolase C-terminal domain-like BJD12_RS07645 PF07690 Major Facilitator Superfamily BJD12_RS07650 PF00171 Aldehyde dehydrogenase family BJD12_RS07655 PF00701 Dihydrodipicolinate synthetase family BJD12_RS07660 PF03466 LysR substrate binding domain BJD12_RS07660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS07670 PF13291 ACT domain BJD12_RS07670 PF04607 Region found in RelA / SpoT proteins BJD12_RS07670 PF02824 TGS domain BJD12_RS07675 PF13419 Haloacid dehalogenase-like hydrolase BJD12_RS07680 PF04198 Putative sugar-binding domain BJD12_RS07690 PF04966 Carbohydrate-selective porin, OprB family BJD12_RS07695 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS07700 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS07705 PF00005 ABC transporter BJD12_RS07705 PF08402 TOBE domain BJD12_RS07720 PF01192 RNA polymerase Rpb6 BJD12_RS07725 PF00625 Guanylate kinase BJD12_RS07730 PF03755 YicC-like family, N-terminal region BJD12_RS07730 PF08340 Domain of unknown function (DUF1732) BJD12_RS07735 PF01138 3' exoribonuclease family, domain 1 BJD12_RS07735 PF03725 3' exoribonuclease family, domain 2 BJD12_RS07745 PF01725 Ham1 family BJD12_RS07750 PF04055 Radical SAM superfamily BJD12_RS07750 PF06969 HemN C-terminal domain BJD12_RS07765 PF00557 Metallopeptidase family M24 BJD12_RS07780 PF00557 Metallopeptidase family M24 BJD12_RS07780 PF05195 Aminopeptidase P, N-terminal domain BJD12_RS07785 PF03695 Uncharacterised protein family (UPF0149) BJD12_RS07795 PF05164 Cell division protein ZapA BJD12_RS07805 PF01812 5-formyltetrahydrofolate cyclo-ligase family BJD12_RS07815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BJD12_RS07825 PF13369 Transglutaminase-like superfamily BJD12_RS07830 PF00301 Rubredoxin BJD12_RS07835 PF02581 Thiamine monophosphate synthase BJD12_RS07855 PF01464 Transglycosylase SLT domain BJD12_RS07875 PF00263 Bacterial type II and III secretion system protein BJD12_RS07875 PF03958 Bacterial type II/III secretion system short domain BJD12_RS07890 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD12_RS07890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD12_RS07890 PF18269 T3SS EscN ATPase C-terminal domain BJD12_RS07905 PF01514 Secretory protein of YscJ/FliF family BJD12_RS07920 PF01312 FlhB HrpN YscU SpaS Family BJD12_RS07925 PF00771 FHIPEP family BJD12_RS07940 PF00813 FliP family BJD12_RS07945 PF01313 Bacterial export proteins, family 3 BJD12_RS08030 PF01527 Transposase BJD12_RS08035 PF13276 HTH-like domain BJD12_RS08035 PF00665 Integrase core domain BJD12_RS08035 PF13333 Integrase core domain BJD12_RS08040 PF05819 NolX protein BJD12_RS08070 PF00202 Aminotransferase class-III BJD12_RS08075 PF17874 MalT-like TPR region BJD12_RS08075 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS08080 PF00127 Copper binding proteins, plastocyanin/azurin family BJD12_RS08085 PF00155 Aminotransferase class I and II BJD12_RS08095 PF00034 Cytochrome c BJD12_RS08095 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BJD12_RS08100 PF01593 Flavin containing amine oxidoreductase BJD12_RS08120 PF00202 Aminotransferase class-III BJD12_RS08125 PF00520 Ion transport protein BJD12_RS08125 PF00027 Cyclic nucleotide-binding domain BJD12_RS08155 PF01569 PAP2 superfamily BJD12_RS08160 PF01062 Bestrophin, RFP-TM, chloride channel BJD12_RS08170 PF01225 Mur ligase family, catalytic domain BJD12_RS08170 PF02875 Mur ligase family, glutamate ligase domain BJD12_RS08170 PF08245 Mur ligase middle domain BJD12_RS08180 PF00365 Phosphofructokinase BJD12_RS08195 PF03030 Inorganic H+ pyrophosphatase BJD12_RS08205 PF00719 Inorganic pyrophosphatase BJD12_RS08215 PF00593 TonB dependent receptor BJD12_RS08215 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS08220 PF12833 Helix-turn-helix domain BJD12_RS08225 PF18500 CadC C-terminal domain 1 BJD12_RS08225 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS08230 PF13667 ThiC-associated domain BJD12_RS08230 PF01964 Radical SAM ThiC family BJD12_RS08235 PF07676 WD40-like Beta Propeller Repeat BJD12_RS08235 PF00326 Prolyl oligopeptidase family BJD12_RS08240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS08240 PF00672 HAMP domain BJD12_RS08250 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BJD12_RS08250 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BJD12_RS08255 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD12_RS08255 PF00205 Thiamine pyrophosphate enzyme, central domain BJD12_RS08255 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD12_RS08265 PF00291 Pyridoxal-phosphate dependent enzyme BJD12_RS08270 PF00682 HMGL-like BJD12_RS08270 PF08502 LeuA allosteric (dimerisation) domain BJD12_RS08280 PF00180 Isocitrate/isopropylmalate dehydrogenase BJD12_RS08285 PF08241 Methyltransferase domain BJD12_RS08290 PF00694 Aconitase C-terminal domain BJD12_RS08295 PF00330 Aconitase family (aconitate hydratase) BJD12_RS08300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS08305 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS08320 PF02321 Outer membrane efflux protein BJD12_RS08325 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BJD12_RS08330 PF03279 Bacterial lipid A biosynthesis acyltransferase BJD12_RS08355 PF03949 Malic enzyme, NAD binding domain BJD12_RS08355 PF01515 Phosphate acetyl/butaryl transferase BJD12_RS08355 PF00390 Malic enzyme, N-terminal domain BJD12_RS08360 PF00375 Sodium:dicarboxylate symporter family BJD12_RS08370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS08370 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS08380 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS08380 PF00593 TonB dependent receptor BJD12_RS08385 PF00248 Aldo/keto reductase family BJD12_RS08400 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS08400 PF00072 Response regulator receiver domain BJD12_RS08410 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS08410 PF08521 Two-component sensor kinase N-terminal BJD12_RS08410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS08415 PF00072 Response regulator receiver domain BJD12_RS08415 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS08425 PF03600 Citrate transporter BJD12_RS08430 PF00106 short chain dehydrogenase BJD12_RS08435 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS08450 PF00128 Alpha amylase, catalytic domain BJD12_RS08465 PF03193 RsgA GTPase BJD12_RS08470 PF00155 Aminotransferase class I and II BJD12_RS08485 PF01522 Polysaccharide deacetylase BJD12_RS08490 PF00462 Glutaredoxin BJD12_RS08505 PF01979 Amidohydrolase family BJD12_RS08510 PF01979 Amidohydrolase family BJD12_RS08550 PF02645 Uncharacterised protein, DegV family COG1307 BJD12_RS08560 PF00756 Putative esterase BJD12_RS08565 PF04828 Glutathione-dependent formaldehyde-activating enzyme BJD12_RS08570 PF00107 Zinc-binding dehydrogenase BJD12_RS08570 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS08575 PF02583 Metal-sensitive transcriptional repressor BJD12_RS08580 PF03466 LysR substrate binding domain BJD12_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS08595 PF00072 Response regulator receiver domain BJD12_RS08595 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS08600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS08600 PF00672 HAMP domain BJD12_RS08600 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS08610 PF04107 Glutamate-cysteine ligase family 2(GCS2) BJD12_RS08630 PF01926 50S ribosome-binding GTPase BJD12_RS08635 PF00034 Cytochrome c BJD12_RS08640 PF01323 DSBA-like thioredoxin domain BJD12_RS08645 PF01323 DSBA-like thioredoxin domain BJD12_RS08655 PF02028 BCCT, betaine/carnitine/choline family transporter BJD12_RS08660 PF00171 Aldehyde dehydrogenase family BJD12_RS08665 PF00732 GMC oxidoreductase BJD12_RS08665 PF05199 GMC oxidoreductase BJD12_RS08680 PF01494 FAD binding domain BJD12_RS08685 PF00593 TonB dependent receptor BJD12_RS08685 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS08690 PF01464 Transglycosylase SLT domain BJD12_RS08690 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BJD12_RS08695 PF00544 Pectate lyase BJD12_RS08715 PF01066 CDP-alcohol phosphatidyltransferase BJD12_RS08725 PF04073 Aminoacyl-tRNA editing domain BJD12_RS08725 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD12_RS08725 PF03129 Anticodon binding domain BJD12_RS08730 PF00816 H-NS histone family BJD12_RS08740 PF02405 Permease MlaE BJD12_RS08745 PF00005 ABC transporter BJD12_RS08750 PF03886 ABC-type transport auxiliary lipoprotein component BJD12_RS08750 PF02470 MlaD protein BJD12_RS08780 PF14307 Glycosyltransferase WbsX BJD12_RS08780 PF05045 Rhamnan synthesis protein F BJD12_RS08785 PF01144 Coenzyme A transferase BJD12_RS08790 PF01144 Coenzyme A transferase BJD12_RS08795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD12_RS08795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD12_RS08795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD12_RS08795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD12_RS08800 PF00483 Nucleotidyl transferase BJD12_RS08800 PF01050 Mannose-6-phosphate isomerase BJD12_RS08805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BJD12_RS08805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BJD12_RS08805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BJD12_RS08810 PF04321 RmlD substrate binding domain BJD12_RS08815 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BJD12_RS08820 PF00483 Nucleotidyl transferase BJD12_RS08825 PF16363 GDP-mannose 4,6 dehydratase BJD12_RS08830 PF01012 Electron transfer flavoprotein domain BJD12_RS08835 PF01012 Electron transfer flavoprotein domain BJD12_RS08835 PF00766 Electron transfer flavoprotein FAD-binding domain BJD12_RS08840 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD12_RS08845 PF00535 Glycosyl transferase family 2 BJD12_RS08865 PF16363 GDP-mannose 4,6 dehydratase BJD12_RS08870 PF16363 GDP-mannose 4,6 dehydratase BJD12_RS08885 PF00534 Glycosyl transferases group 1 BJD12_RS08885 PF13439 Glycosyltransferase Family 4 BJD12_RS08890 PF13847 Methyltransferase domain BJD12_RS08890 PF00069 Protein kinase domain BJD12_RS08910 PF01053 Cys/Met metabolism PLP-dependent enzyme BJD12_RS08915 PF00571 CBS domain BJD12_RS08915 PF00291 Pyridoxal-phosphate dependent enzyme BJD12_RS08935 PF00437 Type II/IV secretion system protein BJD12_RS08940 PF14497 Glutathione S-transferase, C-terminal domain BJD12_RS08940 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS08955 PF00271 Helicase conserved C-terminal domain BJD12_RS08955 PF00270 DEAD/DEAH box helicase BJD12_RS08960 PF01242 6-pyruvoyl tetrahydropterin synthase BJD12_RS08975 PF13185 GAF domain BJD12_RS08990 PF13419 Haloacid dehalogenase-like hydrolase BJD12_RS09000 PF11799 impB/mucB/samB family C-terminal domain BJD12_RS09000 PF00817 impB/mucB/samB family BJD12_RS09005 PF07977 FabA-like domain BJD12_RS09025 PF01432 Peptidase family M3 BJD12_RS09040 PF07731 Multicopper oxidase BJD12_RS09040 PF00394 Multicopper oxidase BJD12_RS09040 PF07732 Multicopper oxidase BJD12_RS09045 PF05275 Copper resistance protein B precursor (CopB) BJD12_RS09050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD12_RS09075 PF01380 SIS domain BJD12_RS09080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS09085 PF12704 MacB-like periplasmic core domain BJD12_RS09085 PF02687 FtsX-like permease family BJD12_RS09085 PF00005 ABC transporter BJD12_RS09090 PF02687 FtsX-like permease family BJD12_RS09090 PF12704 MacB-like periplasmic core domain BJD12_RS09095 PF00005 ABC transporter BJD12_RS09095 PF02687 FtsX-like permease family BJD12_RS09095 PF12704 MacB-like periplasmic core domain BJD12_RS09105 PF02954 Bacterial regulatory protein, Fis family BJD12_RS09105 PF00072 Response regulator receiver domain BJD12_RS09105 PF00158 Sigma-54 interaction domain BJD12_RS09110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS09110 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS09120 PF00132 Bacterial transferase hexapeptide (six repeats) BJD12_RS09120 PF14602 Hexapeptide repeat of succinyl-transferase BJD12_RS09120 PF12804 MobA-like NTP transferase domain BJD12_RS09130 PF01817 Chorismate mutase type II BJD12_RS09135 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BJD12_RS09135 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BJD12_RS09140 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD12_RS09140 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD12_RS09145 PF00231 ATP synthase BJD12_RS09150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD12_RS09150 PF00306 ATP synthase alpha/beta chain, C terminal domain BJD12_RS09150 PF02874 ATP synthase alpha/beta family, beta-barrel domain BJD12_RS09155 PF00213 ATP synthase delta (OSCP) subunit BJD12_RS09160 PF00430 ATP synthase B/B' CF(0) BJD12_RS09165 PF00137 ATP synthase subunit C BJD12_RS09170 PF00119 ATP synthase A chain BJD12_RS09185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD12_RS09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS09195 PF00364 Biotin-requiring enzyme BJD12_RS09195 PF02817 e3 binding domain BJD12_RS09195 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD12_RS09220 PF03180 NLPA lipoprotein BJD12_RS09225 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS09230 PF09383 NIL domain BJD12_RS09230 PF00005 ABC transporter BJD12_RS09235 PF00892 EamA-like transporter family BJD12_RS09240 PF04461 Protein of unknown function (DUF520) BJD12_RS09250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS09250 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS09250 PF09308 LuxQ, periplasmic BJD12_RS09250 PF00072 Response regulator receiver domain BJD12_RS09270 PF13419 Haloacid dehalogenase-like hydrolase BJD12_RS09275 PF00849 RNA pseudouridylate synthase BJD12_RS09275 PF01479 S4 domain BJD12_RS09280 PF08468 Methyltransferase small domain N-terminal BJD12_RS09280 PF05175 Methyltransferase small domain BJD12_RS09290 PF07995 Glucose / Sorbosone dehydrogenase BJD12_RS09300 PF00072 Response regulator receiver domain BJD12_RS09300 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS09300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS09300 PF09308 LuxQ, periplasmic BJD12_RS09320 PF00842 Alanine racemase, C-terminal domain BJD12_RS09320 PF01168 Alanine racemase, N-terminal domain BJD12_RS09325 PF01266 FAD dependent oxidoreductase BJD12_RS09330 PF01037 Lrp/AsnC ligand binding domain BJD12_RS09340 PF01641 SelR domain BJD12_RS09350 PF01618 MotA/TolQ/ExbB proton channel family BJD12_RS09355 PF13677 Membrane MotB of proton-channel complex MotA/MotB BJD12_RS09355 PF00691 OmpA family BJD12_RS09380 PF01061 ABC-2 type transporter BJD12_RS09385 PF00005 ABC transporter BJD12_RS09390 PF00999 Sodium/hydrogen exchanger family BJD12_RS09410 PF02469 Fasciclin domain BJD12_RS09415 PF03167 Uracil DNA glycosylase superfamily BJD12_RS09430 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJD12_RS09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS09440 PF03466 LysR substrate binding domain BJD12_RS09450 PF03358 NADPH-dependent FMN reductase BJD12_RS09460 PF00248 Aldo/keto reductase family BJD12_RS09470 PF05649 Peptidase family M13 BJD12_RS09470 PF01431 Peptidase family M13 BJD12_RS09490 PF13520 Amino acid permease BJD12_RS09500 PF04397 LytTr DNA-binding domain BJD12_RS09500 PF00072 Response regulator receiver domain BJD12_RS09505 PF06580 Histidine kinase BJD12_RS09505 PF07694 5TMR of 5TMR-LYT BJD12_RS09520 PF05974 Domain of unknown function (DUF892) BJD12_RS09525 PF05067 Manganese containing catalase BJD12_RS09540 PF03705 CheR methyltransferase, all-alpha domain BJD12_RS09540 PF08448 PAS fold BJD12_RS09540 PF01739 CheR methyltransferase, SAM binding domain BJD12_RS09540 PF01339 CheB methylesterase BJD12_RS09545 PF00158 Sigma-54 interaction domain BJD12_RS09545 PF02954 Bacterial regulatory protein, Fis family BJD12_RS09545 PF00072 Response regulator receiver domain BJD12_RS09555 PF00158 Sigma-54 interaction domain BJD12_RS09555 PF00072 Response regulator receiver domain BJD12_RS09555 PF02954 Bacterial regulatory protein, Fis family BJD12_RS09565 PF01654 Cytochrome bd terminal oxidase subunit I BJD12_RS09570 PF02322 Cytochrome bd terminal oxidase subunit II BJD12_RS09595 PF13823 Alcohol dehydrogenase GroES-associated BJD12_RS09595 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS09595 PF00107 Zinc-binding dehydrogenase BJD12_RS09620 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD12_RS09620 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BJD12_RS09670 PF00005 ABC transporter BJD12_RS09675 PF03466 LysR substrate binding domain BJD12_RS09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS09680 PF01042 Endoribonuclease L-PSP BJD12_RS09685 PF00672 HAMP domain BJD12_RS09685 PF02203 Tar ligand binding domain homologue BJD12_RS09685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS09710 PF00654 Voltage gated chloride channel BJD12_RS09720 PF00557 Metallopeptidase family M24 BJD12_RS09730 PF01638 HxlR-like helix-turn-helix BJD12_RS09740 PF02630 SCO1/SenC BJD12_RS09750 PF00857 Isochorismatase family BJD12_RS09755 PF02311 AraC-like ligand binding domain BJD12_RS09755 PF12833 Helix-turn-helix domain BJD12_RS09805 PF04546 Sigma-70, non-essential region BJD12_RS09805 PF03979 Sigma-70 factor, region 1.1 BJD12_RS09805 PF00140 Sigma-70 factor, region 1.2 BJD12_RS09805 PF04539 Sigma-70 region 3 BJD12_RS09805 PF04542 Sigma-70 region 2 BJD12_RS09805 PF04545 Sigma-70, region 4 BJD12_RS09810 PF02580 D-Tyr-tRNA(Tyr) deacylase BJD12_RS09815 PF03279 Bacterial lipid A biosynthesis acyltransferase BJD12_RS09820 PF00583 Acetyltransferase (GNAT) family BJD12_RS09825 PF00925 GTP cyclohydrolase II BJD12_RS09845 PF00535 Glycosyl transferase family 2 BJD12_RS09865 PF00551 Formyl transferase BJD12_RS09865 PF02911 Formyl transferase, C-terminal domain BJD12_RS09870 PF01327 Polypeptide deformylase BJD12_RS09875 PF01476 LysM domain BJD12_RS09880 PF17782 DprA winged helix domain BJD12_RS09880 PF02481 DNA recombination-mediator protein A BJD12_RS09885 PF04361 Protein of unknown function (DUF494) BJD12_RS09890 PF00114 Pilin (bacterial filament) BJD12_RS09890 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS09900 PF01131 DNA topoisomerase BJD12_RS09900 PF13368 Topoisomerase C-terminal repeat BJD12_RS09900 PF01751 Toprim domain BJD12_RS09905 PF01300 Telomere recombination BJD12_RS09930 PF01343 Peptidase family S49 BJD12_RS09935 PF01554 MatE BJD12_RS09955 PF00271 Helicase conserved C-terminal domain BJD12_RS09955 PF00270 DEAD/DEAH box helicase BJD12_RS09955 PF18074 Primosomal protein N C-terminal domain BJD12_RS09955 PF17764 3′ DNA-binding domain (3′BD) BJD12_RS09955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BJD12_RS09960 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS09960 PF13417 Glutathione S-transferase, N-terminal domain BJD12_RS09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS09980 PF03458 UPF0126 domain BJD12_RS09985 PF03458 UPF0126 domain BJD12_RS09990 PF04542 Sigma-70 region 2 BJD12_RS09990 PF04545 Sigma-70, region 4 BJD12_RS09995 PF03167 Uracil DNA glycosylase superfamily BJD12_RS10000 PF00072 Response regulator receiver domain BJD12_RS10005 PF18075 FtsX extracellular domain BJD12_RS10010 PF00005 ABC transporter BJD12_RS10015 PF00271 Helicase conserved C-terminal domain BJD12_RS10015 PF12300 ATP-dependent RNA helicase RhlB BJD12_RS10015 PF00270 DEAD/DEAH box helicase BJD12_RS10020 PF00085 Thioredoxin BJD12_RS10025 PF07497 Rho termination factor, RNA-binding domain BJD12_RS10025 PF07498 Rho termination factor, N-terminal domain BJD12_RS10025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BJD12_RS10035 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BJD12_RS10040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS10040 PF03466 LysR substrate binding domain BJD12_RS10050 PF03971 Monomeric isocitrate dehydrogenase BJD12_RS10060 PF01476 LysM domain BJD12_RS10060 PF04972 BON domain BJD12_RS10065 PF14489 QueF-like protein BJD12_RS10065 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BJD12_RS10070 PF01546 Peptidase family M20/M25/M40 BJD12_RS10070 PF07687 Peptidase dimerisation domain BJD12_RS10075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS10085 PF00873 AcrB/AcrD/AcrF family BJD12_RS10100 PF07063 Domain of unknown function (DUF1338) BJD12_RS10140 PF01427 D-ala-D-ala dipeptidase BJD12_RS10145 PF01510 N-acetylmuramoyl-L-alanine amidase BJD12_RS10155 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD12_RS10155 PF13378 Enolase C-terminal domain-like BJD12_RS10165 PF13520 Amino acid permease BJD12_RS10180 PF05360 yiaA/B two helix domain BJD12_RS10185 PF07995 Glucose / Sorbosone dehydrogenase BJD12_RS10190 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD12_RS10190 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS10190 PF14310 Fibronectin type III-like domain BJD12_RS10195 PF02152 Dihydroneopterin aldolase BJD12_RS10200 PF00814 Glycoprotease family BJD12_RS10205 PF01165 Ribosomal protein S21 BJD12_RS10210 PF09424 Yqey-like protein BJD12_RS10215 PF03631 Virulence factor BrkB BJD12_RS10220 PF10410 DnaB-helicase binding domain of primase BJD12_RS10220 PF08278 DNA primase DnaG DnaB-binding BJD12_RS10220 PF08275 DNA primase catalytic core, N-terminal domain BJD12_RS10220 PF01807 CHC2 zinc finger BJD12_RS10235 PF13593 SBF-like CPA transporter family (DUF4137) BJD12_RS10245 PF01040 UbiA prenyltransferase family BJD12_RS10270 PF00510 Cytochrome c oxidase subunit III BJD12_RS10275 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 BJD12_RS10285 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJD12_RS10290 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BJD12_RS10290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BJD12_RS10300 PF14850 DNA-binding domain of Proline dehydrogenase BJD12_RS10300 PF01619 Proline dehydrogenase BJD12_RS10300 PF00171 Aldehyde dehydrogenase family BJD12_RS10300 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BJD12_RS10330 PF00579 tRNA synthetases class I (W and Y) BJD12_RS10335 PF01551 Peptidase family M23 BJD12_RS10335 PF04225 Opacity-associated protein A LysM-like domain BJD12_RS10340 PF03702 Anhydro-N-acetylmuramic acid kinase BJD12_RS10350 PF07690 Major Facilitator Superfamily BJD12_RS10360 PF03372 Endonuclease/Exonuclease/phosphatase family BJD12_RS10365 PF00156 Phosphoribosyl transferase domain BJD12_RS10375 PF13614 AAA domain BJD12_RS10380 PF02195 ParB-like nuclease domain BJD12_RS10380 PF17762 HTH domain found in ParB protein BJD12_RS10395 PF01370 NAD dependent epimerase/dehydratase family BJD12_RS10400 PF00535 Glycosyl transferase family 2 BJD12_RS10415 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BJD12_RS10415 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BJD12_RS10415 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BJD12_RS10415 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BJD12_RS10420 PF00692 dUTPase BJD12_RS10425 PF04127 DNA / pantothenate metabolism flavoprotein BJD12_RS10425 PF02441 Flavoprotein BJD12_RS10430 PF04002 RadC-like JAB domain BJD12_RS10435 PF00750 tRNA synthetases class I (R) BJD12_RS10435 PF03485 Arginyl tRNA synthetase N terminal domain BJD12_RS10435 PF05746 DALR anticodon binding domain BJD12_RS10450 PF00106 short chain dehydrogenase BJD12_RS10455 PF01757 Acyltransferase family BJD12_RS10465 PF03033 Glycosyltransferase family 28 N-terminal domain BJD12_RS10475 PF17810 Arginine decarboxylase helical bundle domain BJD12_RS10475 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BJD12_RS10475 PF17944 Arginine decarboxylase C-terminal helical extension BJD12_RS10480 PF17284 Spermidine synthase tetramerisation domain BJD12_RS10500 PF07555 beta-N-acetylglucosaminidase BJD12_RS10500 PF00041 Fibronectin type III domain BJD12_RS10500 PF00754 F5/8 type C domain BJD12_RS10500 PF00963 Cohesin domain BJD12_RS10500 PF02838 Glycosyl hydrolase family 20, domain 2 BJD12_RS10505 PF00543 Nitrogen regulatory protein P-II BJD12_RS10510 PF04380 Membrane fusogenic activity BJD12_RS10515 PF01078 Magnesium chelatase, subunit ChlI BJD12_RS10515 PF13335 Magnesium chelatase, subunit ChlI C-terminal BJD12_RS10530 PF12792 CSS motif domain associated with EAL BJD12_RS10530 PF00563 EAL domain BJD12_RS10535 PF00487 Fatty acid desaturase BJD12_RS10540 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD12_RS10540 PF00970 Oxidoreductase FAD-binding domain BJD12_RS10540 PF00175 Oxidoreductase NAD-binding domain BJD12_RS10545 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS10560 PF01139 tRNA-splicing ligase RtcB BJD12_RS10595 PF08338 Domain of unknown function (DUF1731) BJD12_RS10595 PF01370 NAD dependent epimerase/dehydratase family BJD12_RS10600 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS10600 PF00072 Response regulator receiver domain BJD12_RS10605 PF08521 Two-component sensor kinase N-terminal BJD12_RS10605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS10605 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS10625 PF00595 PDZ domain BJD12_RS10625 PF13180 PDZ domain BJD12_RS10645 PF01594 AI-2E family transporter BJD12_RS10655 PF00883 Cytosol aminopeptidase family, catalytic domain BJD12_RS10655 PF02789 Cytosol aminopeptidase family, N-terminal domain BJD12_RS10665 PF00199 Catalase BJD12_RS10680 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS10680 PF00072 Response regulator receiver domain BJD12_RS10690 PF07730 Histidine kinase BJD12_RS10695 PF13533 Biotin-lipoyl like BJD12_RS10700 PF00005 ABC transporter BJD12_RS10720 PF00892 EamA-like transporter family BJD12_RS10725 PF00892 EamA-like transporter family BJD12_RS10740 PF00753 Metallo-beta-lactamase superfamily BJD12_RS10745 PF00579 tRNA synthetases class I (W and Y) BJD12_RS10750 PF05532 CsbD-like BJD12_RS10765 PF00491 Arginase family BJD12_RS10790 PF02223 Thymidylate kinase BJD12_RS10805 PF03309 Type III pantothenate kinase BJD12_RS10810 PF02237 Biotin protein ligase C terminal domain BJD12_RS10810 PF03099 Biotin/lipoate A/B protein ligase family BJD12_RS10810 PF08279 HTH domain BJD12_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS10840 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS10840 PF00072 Response regulator receiver domain BJD12_RS10850 PF01207 Dihydrouridine synthase (Dus) BJD12_RS10870 PF00199 Catalase BJD12_RS10870 PF06628 Catalase-related immune-responsive BJD12_RS10880 PF13307 Helicase C-terminal domain BJD12_RS10880 PF06733 DEAD_2 BJD12_RS10895 PF08501 Shikimate dehydrogenase substrate binding domain BJD12_RS10895 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BJD12_RS10895 PF01488 Shikimate / quinate 5-dehydrogenase BJD12_RS10905 PF00258 Flavodoxin BJD12_RS10905 PF00667 FAD binding domain BJD12_RS10905 PF00175 Oxidoreductase NAD-binding domain BJD12_RS10915 PF00490 Delta-aminolevulinic acid dehydratase BJD12_RS10945 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BJD12_RS10945 PF00326 Prolyl oligopeptidase family BJD12_RS10950 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS10950 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS10970 PF04820 Tryptophan halogenase BJD12_RS10985 PF00005 ABC transporter BJD12_RS10995 PF01381 Helix-turn-helix BJD12_RS11005 PF01229 Glycosyl hydrolases family 39 BJD12_RS11010 PF02583 Metal-sensitive transcriptional repressor BJD12_RS11015 PF01545 Cation efflux family BJD12_RS11020 PF00970 Oxidoreductase FAD-binding domain BJD12_RS11020 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD12_RS11020 PF00175 Oxidoreductase NAD-binding domain BJD12_RS11025 PF00005 ABC transporter BJD12_RS11030 PF01061 ABC-2 type transporter BJD12_RS11035 PF08546 Ketopantoate reductase PanE/ApbA C terminal BJD12_RS11035 PF02558 Ketopantoate reductase PanE/ApbA BJD12_RS11045 PF03061 Thioesterase superfamily BJD12_RS11065 PF00268 Ribonucleotide reductase, small chain BJD12_RS11070 PF02867 Ribonucleotide reductase, barrel domain BJD12_RS11070 PF03477 ATP cone domain BJD12_RS11070 PF00317 Ribonucleotide reductase, all-alpha domain BJD12_RS11085 PF13380 CoA binding domain BJD12_RS11085 PF13607 Succinyl-CoA ligase like flavodoxin domain BJD12_RS11085 PF00583 Acetyltransferase (GNAT) family BJD12_RS11090 PF01769 Divalent cation transporter BJD12_RS11090 PF00571 CBS domain BJD12_RS11090 PF03448 MgtE intracellular N domain BJD12_RS11100 PF00999 Sodium/hydrogen exchanger family BJD12_RS11100 PF02254 TrkA-N domain BJD12_RS11105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BJD12_RS11105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BJD12_RS11110 PF00723 Glycosyl hydrolases family 15 BJD12_RS11115 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJD12_RS11125 PF05166 YcgL domain BJD12_RS11130 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS11130 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS11175 PF07977 FabA-like domain BJD12_RS11180 PF01553 Acyltransferase BJD12_RS11190 PF00550 Phosphopantetheine attachment site BJD12_RS11195 PF04820 Tryptophan halogenase BJD12_RS11240 PF01218 Coproporphyrinogen III oxidase BJD12_RS11245 PF00476 DNA polymerase family A BJD12_RS11245 PF01367 5'-3' exonuclease, C-terminal SAM fold BJD12_RS11245 PF01612 3'-5' exonuclease BJD12_RS11245 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJD12_RS11255 PF06812 ImpA, N-terminal, type VI secretion system BJD12_RS11275 PF03793 PASTA domain BJD12_RS11275 PF00069 Protein kinase domain BJD12_RS11290 PF14331 ImcF-related N-terminal domain BJD12_RS11290 PF06744 Type VI secretion protein IcmF C-terminal BJD12_RS11290 PF06761 Intracellular multiplication and human macrophage-killing BJD12_RS11300 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE BJD12_RS11310 PF00248 Aldo/keto reductase family BJD12_RS11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS11315 PF03466 LysR substrate binding domain BJD12_RS11335 PF04717 Type VI secretion system, phage-baseplate injector BJD12_RS11350 PF03793 PASTA domain BJD12_RS11350 PF00069 Protein kinase domain BJD12_RS11365 PF13417 Glutathione S-transferase, N-terminal domain BJD12_RS11405 PF17871 AAA lid domain BJD12_RS11405 PF10431 C-terminal, D2-small domain, of ClpB protein BJD12_RS11405 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS11405 PF07724 AAA domain (Cdc48 subfamily) BJD12_RS11415 PF05947 Type VI secretion system, TssF BJD12_RS11420 PF04965 Gene 25-like lysozyme BJD12_RS11425 PF07024 ImpE protein BJD12_RS11430 PF05638 Type VI secretion system effector, Hcp BJD12_RS11435 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath BJD12_RS11440 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 BJD12_RS11455 PF14602 Hexapeptide repeat of succinyl-transferase BJD12_RS11455 PF12464 Maltose acetyltransferase BJD12_RS11460 PF13361 UvrD-like helicase C-terminal domain BJD12_RS11460 PF00580 UvrD/REP helicase N-terminal domain BJD12_RS11475 PF13396 Phospholipase_D-nuclease N-terminal BJD12_RS11475 PF13091 PLD-like domain BJD12_RS11480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS11480 PF03466 LysR substrate binding domain BJD12_RS11485 PF03737 Aldolase/RraA BJD12_RS11490 PF04303 PrpF protein BJD12_RS11495 PF04909 Amidohydrolase BJD12_RS11500 PF00471 Ribosomal protein L33 BJD12_RS11505 PF00830 Ribosomal L28 family BJD12_RS11510 PF00873 AcrB/AcrD/AcrF family BJD12_RS11520 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS11520 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS11540 PF02527 rRNA small subunit methyltransferase G BJD12_RS11545 PF09423 PhoD-like phosphatase BJD12_RS11545 PF16655 PhoD-like phosphatase, N-terminal domain BJD12_RS11550 PF01648 4'-phosphopantetheinyl transferase superfamily BJD12_RS11575 PF00474 Sodium:solute symporter family BJD12_RS11580 PF04341 Protein of unknown function, DUF485 BJD12_RS11590 PF16177 Acetyl-coenzyme A synthetase N-terminus BJD12_RS11590 PF00501 AMP-binding enzyme BJD12_RS11590 PF13193 AMP-binding enzyme C-terminal domain BJD12_RS11595 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS11595 PF00072 Response regulator receiver domain BJD12_RS11620 PF04616 Glycosyl hydrolases family 43 BJD12_RS11620 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD12_RS11625 PF00248 Aldo/keto reductase family BJD12_RS11640 PF01557 Fumarylacetoacetate (FAA) hydrolase family BJD12_RS11645 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD12_RS11645 PF13378 Enolase C-terminal domain-like BJD12_RS11650 PF05336 L-rhamnose mutarotase BJD12_RS11655 PF07690 Major Facilitator Superfamily BJD12_RS11660 PF01614 Bacterial transcriptional regulator BJD12_RS11660 PF09339 IclR helix-turn-helix domain BJD12_RS11665 PF02659 Putative manganese efflux pump BJD12_RS11670 PF09456 RcsC Alpha-Beta-Loop (ABL) BJD12_RS11670 PF00072 Response regulator receiver domain BJD12_RS11670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS11670 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS11685 PF06165 Glycosyltransferase family 36 BJD12_RS11685 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BJD12_RS11700 PF13360 PQQ-like domain BJD12_RS11700 PF13570 PQQ-like domain BJD12_RS11700 PF01011 PQQ enzyme repeat BJD12_RS11720 PF04357 TamB, inner membrane protein subunit of TAM complex BJD12_RS11725 PF01103 Surface antigen BJD12_RS11725 PF17243 POTRA domain TamA domain 1 BJD12_RS11730 PF00593 TonB dependent receptor BJD12_RS11730 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS11735 PF13181 Tetratricopeptide repeat BJD12_RS11740 PF02092 Glycyl-tRNA synthetase beta subunit BJD12_RS11740 PF05746 DALR anticodon binding domain BJD12_RS11745 PF02091 Glycyl-tRNA synthetase alpha subunit BJD12_RS11750 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD12_RS11750 PF00437 Type II/IV secretion system protein BJD12_RS11760 PF00117 Glutamine amidotransferase class-I BJD12_RS11760 PF00958 GMP synthase C terminal domain BJD12_RS11775 PF00902 Sec-independent protein translocase protein (TatC) BJD12_RS11780 PF02416 mttA/Hcf106 family BJD12_RS11785 PF02416 mttA/Hcf106 family BJD12_RS11795 PF00762 Ferrochelatase BJD12_RS11800 PF12697 Alpha/beta hydrolase family BJD12_RS11815 PF04381 Putative exonuclease, RdgC BJD12_RS11820 PF01171 PP-loop family BJD12_RS11835 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS11840 PF03648 Glycosyl hydrolase family 67 N-terminus BJD12_RS11840 PF07477 Glycosyl hydrolase family 67 C-terminus BJD12_RS11840 PF07488 Glycosyl hydrolase family 67 middle domain BJD12_RS11850 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD12_RS11850 PF13378 Enolase C-terminal domain-like BJD12_RS11855 PF04616 Glycosyl hydrolases family 43 BJD12_RS11855 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD12_RS11860 PF14310 Fibronectin type III-like domain BJD12_RS11860 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS11860 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD12_RS11860 PF07691 PA14 domain BJD12_RS11865 PF08125 Mannitol dehydrogenase C-terminal domain BJD12_RS11865 PF01232 Mannitol dehydrogenase Rossmann domain BJD12_RS11895 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD12_RS11905 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BJD12_RS11905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BJD12_RS11905 PF16355 Domain of unknown function (DUF4982) BJD12_RS11905 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD12_RS11905 PF00703 Glycosyl hydrolases family 2 BJD12_RS11910 PF02614 Glucuronate isomerase BJD12_RS11915 PF00553 Cellulose binding domain BJD12_RS11915 PF03422 Carbohydrate binding module (family 6) BJD12_RS11915 PF00331 Glycosyl hydrolase family 10 BJD12_RS11935 PF04616 Glycosyl hydrolases family 43 BJD12_RS11965 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS11965 PF14765 Polyketide synthase dehydratase BJD12_RS11965 PF00550 Phosphopantetheine attachment site BJD12_RS11965 PF16197 Ketoacyl-synthetase C-terminal extension BJD12_RS11965 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS11965 PF08659 KR domain BJD12_RS11965 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS11965 PF00698 Acyl transferase domain BJD12_RS11970 PF01553 Acyltransferase BJD12_RS11980 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS11995 PF04820 Tryptophan halogenase BJD12_RS12000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BJD12_RS12005 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) BJD12_RS12010 PF04337 Protein of unknown function, DUF480 BJD12_RS12025 PF13361 UvrD-like helicase C-terminal domain BJD12_RS12025 PF00580 UvrD/REP helicase N-terminal domain BJD12_RS12030 PF00265 Thymidine kinase BJD12_RS12035 PF00360 Phytochrome region BJD12_RS12035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS12035 PF01590 GAF domain BJD12_RS12035 PF08446 PAS fold BJD12_RS12035 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS12040 PF04349 Periplasmic glucan biosynthesis protein, MdoG BJD12_RS12050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD12_RS12050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BJD12_RS12050 PF06827 Zinc finger found in FPG and IleRS BJD12_RS12080 PF03594 Benzoate membrane transport protein BJD12_RS12085 PF08446 PAS fold BJD12_RS12085 PF00360 Phytochrome region BJD12_RS12085 PF13426 PAS domain BJD12_RS12085 PF01590 GAF domain BJD12_RS12090 PF01126 Heme oxygenase BJD12_RS12095 PF07690 Major Facilitator Superfamily BJD12_RS12100 PF01263 Aldose 1-epimerase BJD12_RS12110 PF02810 SEC-C motif BJD12_RS12115 PF01925 Sulfite exporter TauE/SafE BJD12_RS12135 PF01227 GTP cyclohydrolase I BJD12_RS12145 PF07869 Protein of unknown function (DUF1656) BJD12_RS12150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS12150 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS12155 PF02321 Outer membrane efflux protein BJD12_RS12160 PF04632 Fusaric acid resistance protein family BJD12_RS12165 PF00083 Sugar (and other) transporter BJD12_RS12175 PF13091 PLD-like domain BJD12_RS12175 PF13396 Phospholipase_D-nuclease N-terminal BJD12_RS12235 PF00849 RNA pseudouridylate synthase BJD12_RS12275 PF09386 Antitoxin ParD BJD12_RS12285 PF13538 UvrD-like helicase C-terminal domain BJD12_RS12290 PF12705 PD-(D/E)XK nuclease superfamily BJD12_RS12290 PF00580 UvrD/REP helicase N-terminal domain BJD12_RS12290 PF13361 UvrD-like helicase C-terminal domain BJD12_RS12295 PF17946 RecC C-terminal domain BJD12_RS12335 PF00005 ABC transporter BJD12_RS12340 PF02405 Permease MlaE BJD12_RS12345 PF02470 MlaD protein BJD12_RS12350 PF05494 MlaC protein BJD12_RS12360 PF04333 MlaA lipoprotein BJD12_RS12370 PF00255 Glutathione peroxidase BJD12_RS12380 PF02646 RmuC family BJD12_RS12385 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS12385 PF00107 Zinc-binding dehydrogenase BJD12_RS12390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS12390 PF03466 LysR substrate binding domain BJD12_RS12400 PF13417 Glutathione S-transferase, N-terminal domain BJD12_RS12400 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS12410 PF13520 Amino acid permease BJD12_RS12415 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD12_RS12415 PF07971 Glycosyl hydrolase family 92 BJD12_RS12420 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS12420 PF00593 TonB dependent receptor BJD12_RS12425 PF10947 Protein of unknown function (DUF2628) BJD12_RS12430 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS12430 PF08448 PAS fold BJD12_RS12435 PF02595 Glycerate kinase family BJD12_RS12455 PF17785 PUA-like domain BJD12_RS12455 PF10672 S-adenosylmethionine-dependent methyltransferase BJD12_RS12465 PF03741 Integral membrane protein TerC family BJD12_RS12475 PF01694 Rhomboid family BJD12_RS12480 PF03009 Glycerophosphoryl diester phosphodiesterase family BJD12_RS12490 PF01569 PAP2 superfamily BJD12_RS12495 PF01926 50S ribosome-binding GTPase BJD12_RS12495 PF12631 MnmE helical domain BJD12_RS12495 PF10396 GTP-binding protein TrmE N-terminus BJD12_RS12505 PF01522 Polysaccharide deacetylase BJD12_RS12510 PF02096 60Kd inner membrane protein BJD12_RS12510 PF14849 YidC periplasmic domain BJD12_RS12515 PF00825 Ribonuclease P BJD12_RS12520 PF00468 Ribosomal protein L34 BJD12_RS12530 PF08299 Bacterial dnaA protein helix-turn-helix BJD12_RS12530 PF00308 Bacterial dnaA protein BJD12_RS12530 PF11638 DnaA N-terminal domain BJD12_RS12535 PF00712 DNA polymerase III beta subunit, N-terminal domain BJD12_RS12535 PF02768 DNA polymerase III beta subunit, C-terminal domain BJD12_RS12535 PF02767 DNA polymerase III beta subunit, central domain BJD12_RS12540 PF02463 RecF/RecN/SMC N terminal domain BJD12_RS12545 PF00986 DNA gyrase B subunit, carboxyl terminus BJD12_RS12545 PF00204 DNA gyrase B BJD12_RS12545 PF18053 DNA gyrase B subunit insert domain BJD12_RS12545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS12545 PF01751 Toprim domain BJD12_RS12555 PF01435 Peptidase family M48 BJD12_RS12565 PF03544 Gram-negative bacterial TonB protein C-terminal BJD12_RS12570 PF01618 MotA/TolQ/ExbB proton channel family BJD12_RS12575 PF02472 Biopolymer transport protein ExbD/TolR BJD12_RS12580 PF02472 Biopolymer transport protein ExbD/TolR BJD12_RS12590 PF02472 Biopolymer transport protein ExbD/TolR BJD12_RS12600 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BJD12_RS12610 PF13396 Phospholipase_D-nuclease N-terminal BJD12_RS12610 PF13091 PLD-like domain BJD12_RS12630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BJD12_RS12645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BJD12_RS12645 PF01842 ACT domain BJD12_RS12645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BJD12_RS12650 PF13180 PDZ domain BJD12_RS12650 PF03572 Peptidase family S41 BJD12_RS12660 PF01551 Peptidase family M23 BJD12_RS12670 PF04389 Peptidase family M28 BJD12_RS12680 PF00150 Cellulase (glycosyl hydrolase family 5) BJD12_RS12685 PF00150 Cellulase (glycosyl hydrolase family 5) BJD12_RS12690 PF00150 Cellulase (glycosyl hydrolase family 5) BJD12_RS12695 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS12695 PF00107 Zinc-binding dehydrogenase BJD12_RS12700 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS12700 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BJD12_RS12705 PF01645 Conserved region in glutamate synthase BJD12_RS12705 PF00310 Glutamine amidotransferases class-II BJD12_RS12705 PF01493 GXGXG motif BJD12_RS12705 PF04898 Glutamate synthase central domain BJD12_RS12730 PF01804 Penicillin amidase BJD12_RS12740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS12740 PF03466 LysR substrate binding domain BJD12_RS12750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS12750 PF03466 LysR substrate binding domain BJD12_RS12825 PF00271 Helicase conserved C-terminal domain BJD12_RS12825 PF09369 Domain of unknown function (DUF1998) BJD12_RS12825 PF00270 DEAD/DEAH box helicase BJD12_RS12830 PF03006 Haemolysin-III related BJD12_RS12840 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS12840 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS12850 PF01431 Peptidase family M13 BJD12_RS12850 PF05649 Peptidase family M13 BJD12_RS12855 PF03466 LysR substrate binding domain BJD12_RS12855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS12880 PF02525 Flavodoxin-like fold BJD12_RS12890 PF01638 HxlR-like helix-turn-helix BJD12_RS12925 PF05532 CsbD-like BJD12_RS12930 PF08448 PAS fold BJD12_RS12930 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS12930 PF13188 PAS domain BJD12_RS12930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS12930 PF00072 Response regulator receiver domain BJD12_RS12970 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS12975 PF07690 Major Facilitator Superfamily BJD12_RS12980 PF00293 NUDIX domain BJD12_RS12980 PF13344 Haloacid dehalogenase-like hydrolase BJD12_RS12990 PF01594 AI-2E family transporter BJD12_RS12995 PF07859 alpha/beta hydrolase fold BJD12_RS13005 PF00085 Thioredoxin BJD12_RS13010 PF00083 Sugar (and other) transporter BJD12_RS13010 PF08946 Osmosensory transporter coiled coil BJD12_RS13055 PF07726 ATPase family associated with various cellular activities (AAA) BJD12_RS13055 PF17863 AAA lid domain BJD12_RS13090 PF06441 Epoxide hydrolase N terminus BJD12_RS13100 PF18665 Tetracyclin repressor-like, C-terminal domain BJD12_RS13100 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS13105 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BJD12_RS13110 PF00155 Aminotransferase class I and II BJD12_RS13115 PF00593 TonB dependent receptor BJD12_RS13115 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS13135 PF00171 Aldehyde dehydrogenase family BJD12_RS13140 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS13140 PF00107 Zinc-binding dehydrogenase BJD12_RS13155 PF02735 Ku70/Ku80 beta-barrel domain BJD12_RS13160 PF13298 DNA polymerase Ligase (LigD) BJD12_RS13160 PF04679 ATP dependent DNA ligase C terminal region BJD12_RS13160 PF01068 ATP dependent DNA ligase domain BJD12_RS13165 PF01070 FMN-dependent dehydrogenase BJD12_RS13180 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BJD12_RS13185 PF07730 Histidine kinase BJD12_RS13190 PF00072 Response regulator receiver domain BJD12_RS13190 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS13200 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS13200 PF18500 CadC C-terminal domain 1 BJD12_RS13205 PF12241 Trans-2-enoyl-CoA reductase catalytic region BJD12_RS13205 PF07055 Enoyl reductase FAD binding domain BJD12_RS13205 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BJD12_RS13215 PF00294 pfkB family carbohydrate kinase BJD12_RS13230 PF01095 Pectinesterase BJD12_RS13265 PF01527 Transposase BJD12_RS13315 PF00128 Alpha amylase, catalytic domain BJD12_RS13315 PF11896 Domain of unknown function (DUF3416) BJD12_RS13320 PF00128 Alpha amylase, catalytic domain BJD12_RS13320 PF16657 Maltogenic Amylase, C-terminal domain BJD12_RS13325 PF00128 Alpha amylase, catalytic domain BJD12_RS13325 PF02806 Alpha amylase, C-terminal all-beta domain BJD12_RS13325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD12_RS13355 PF00248 Aldo/keto reductase family BJD12_RS13360 PF13472 GDSL-like Lipase/Acylhydrolase family BJD12_RS13365 PF00135 Carboxylesterase family BJD12_RS13370 PF13472 GDSL-like Lipase/Acylhydrolase family BJD12_RS13370 PF07859 alpha/beta hydrolase fold BJD12_RS13380 PF03480 Bacterial extracellular solute-binding protein, family 7 BJD12_RS13390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BJD12_RS13395 PF04616 Glycosyl hydrolases family 43 BJD12_RS13395 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD12_RS13400 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS13410 PF04962 KduI/IolB family BJD12_RS13425 PF00657 GDSL-like Lipase/Acylhydrolase BJD12_RS13435 PF00351 Biopterin-dependent aromatic amino acid hydroxylase BJD12_RS13440 PF01037 Lrp/AsnC ligand binding domain BJD12_RS13450 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS13450 PF07660 Secretin and TonB N terminus short domain BJD12_RS13450 PF00593 TonB dependent receptor BJD12_RS13455 PF01734 Patatin-like phospholipase BJD12_RS13465 PF00005 ABC transporter BJD12_RS13480 PF00571 CBS domain BJD12_RS13480 PF00005 ABC transporter BJD12_RS13485 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS13495 PF12867 DinB superfamily BJD12_RS13495 PF03781 Sulfatase-modifying factor enzyme 1 BJD12_RS13500 PF10017 Histidine-specific methyltransferase, SAM-dependent BJD12_RS13525 PF01883 Iron-sulfur cluster assembly protein BJD12_RS13525 PF10609 NUBPL iron-transfer P-loop NTPase BJD12_RS13535 PF04264 YceI-like domain BJD12_RS13540 PF13091 PLD-like domain BJD12_RS13550 PF03061 Thioesterase superfamily BJD12_RS13570 PF01161 Phosphatidylethanolamine-binding protein BJD12_RS13580 PF02673 Bacitracin resistance protein BacA BJD12_RS13590 PF03951 Glutamine synthetase, beta-Grasp domain BJD12_RS13590 PF00120 Glutamine synthetase, catalytic domain BJD12_RS13595 PF00543 Nitrogen regulatory protein P-II BJD12_RS13600 PF00909 Ammonium Transporter Family BJD12_RS13605 PF00989 PAS fold BJD12_RS13605 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS13605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS13610 PF00158 Sigma-54 interaction domain BJD12_RS13610 PF00072 Response regulator receiver domain BJD12_RS13610 PF02954 Bacterial regulatory protein, Fis family BJD12_RS13615 PF00080 Copper/zinc superoxide dismutase (SODC) BJD12_RS13620 PF00080 Copper/zinc superoxide dismutase (SODC) BJD12_RS13635 PF02803 Thiolase, C-terminal domain BJD12_RS13635 PF00108 Thiolase, N-terminal domain BJD12_RS13675 PF00581 Rhodanese-like domain BJD12_RS13680 PF02556 Preprotein translocase subunit SecB BJD12_RS13685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BJD12_RS13685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BJD12_RS13695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BJD12_RS13695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BJD12_RS13695 PF00205 Thiamine pyrophosphate enzyme, central domain BJD12_RS13700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS13705 PF02954 Bacterial regulatory protein, Fis family BJD12_RS13705 PF00158 Sigma-54 interaction domain BJD12_RS13705 PF00072 Response regulator receiver domain BJD12_RS13720 PF07690 Major Facilitator Superfamily BJD12_RS13725 PF00588 SpoU rRNA Methylase family BJD12_RS13740 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD12_RS13740 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD12_RS13745 PF13784 Fic/DOC family N-terminal BJD12_RS13745 PF02661 Fic/DOC family BJD12_RS13750 PF00561 alpha/beta hydrolase fold BJD12_RS13755 PF03692 Putative zinc- or iron-chelating domain BJD12_RS13760 PF00501 AMP-binding enzyme BJD12_RS13765 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family BJD12_RS13780 PF01820 D-ala D-ala ligase N-terminus BJD12_RS13780 PF07478 D-ala D-ala ligase C-terminus BJD12_RS13790 PF03109 ABC1 family BJD12_RS13800 PF00849 RNA pseudouridylate synthase BJD12_RS13810 PF00472 RF-1 domain BJD12_RS13830 PF01432 Peptidase family M3 BJD12_RS13835 PF01432 Peptidase family M3 BJD12_RS13845 PF12706 Beta-lactamase superfamily domain BJD12_RS13860 PF12833 Helix-turn-helix domain BJD12_RS13865 PF00999 Sodium/hydrogen exchanger family BJD12_RS13870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS13870 PF03466 LysR substrate binding domain BJD12_RS13875 PF01274 Malate synthase BJD12_RS13880 PF00463 Isocitrate lyase family BJD12_RS13885 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS13905 PF00326 Prolyl oligopeptidase family BJD12_RS13910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD12_RS13910 PF00289 Biotin carboxylase, N-terminal domain BJD12_RS13910 PF00364 Biotin-requiring enzyme BJD12_RS13910 PF02785 Biotin carboxylase C-terminal domain BJD12_RS13915 PF01039 Carboxyl transferase domain BJD12_RS13920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD12_RS13920 PF02770 Acyl-CoA dehydrogenase, middle domain BJD12_RS13920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD12_RS13980 PF02492 CobW/HypB/UreG, nucleotide-binding domain BJD12_RS13980 PF07683 Cobalamin synthesis protein cobW C-terminal domain BJD12_RS14005 PF03969 AFG1-like ATPase BJD12_RS14010 PF01047 MarR family BJD12_RS14015 PF02566 OsmC-like protein BJD12_RS14020 PF07859 alpha/beta hydrolase fold BJD12_RS14025 PF00561 alpha/beta hydrolase fold BJD12_RS14045 PF00248 Aldo/keto reductase family BJD12_RS14050 PF16884 N-terminal domain of oxidoreductase BJD12_RS14050 PF00107 Zinc-binding dehydrogenase BJD12_RS14055 PF00248 Aldo/keto reductase family BJD12_RS14065 PF00849 RNA pseudouridylate synthase BJD12_RS14080 PF08482 ATP-dependent helicase C-terminal BJD12_RS14080 PF00271 Helicase conserved C-terminal domain BJD12_RS14080 PF04408 Helicase associated domain (HA2) BJD12_RS14080 PF00270 DEAD/DEAH box helicase BJD12_RS14085 PF00672 HAMP domain BJD12_RS14085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS14085 PF02203 Tar ligand binding domain homologue BJD12_RS14090 PF07308 Protein of unknown function (DUF1456) BJD12_RS14095 PF00576 HIUase/Transthyretin family BJD12_RS14100 PF13454 FAD-NAD(P)-binding BJD12_RS14120 PF00266 Aminotransferase class-V BJD12_RS14125 PF07687 Peptidase dimerisation domain BJD12_RS14125 PF01546 Peptidase family M20/M25/M40 BJD12_RS14130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS14130 PF03466 LysR substrate binding domain BJD12_RS14135 PF07690 Major Facilitator Superfamily BJD12_RS14155 PF01425 Amidase BJD12_RS14160 PF01156 Inosine-uridine preferring nucleoside hydrolase BJD12_RS14170 PF00860 Permease family BJD12_RS14175 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD12_RS14180 PF00355 Rieske [2Fe-2S] domain BJD12_RS14185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS14185 PF03466 LysR substrate binding domain BJD12_RS14190 PF01026 TatD related DNase BJD12_RS14205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS14205 PF03466 LysR substrate binding domain BJD12_RS14210 PF07690 Major Facilitator Superfamily BJD12_RS14225 PF00106 short chain dehydrogenase BJD12_RS14235 PF02146 Sir2 family BJD12_RS14240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD12_RS14245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD12_RS14245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJD12_RS14255 PF00551 Formyl transferase BJD12_RS14260 PF12833 Helix-turn-helix domain BJD12_RS14260 PF12852 Cupin BJD12_RS14265 PF00106 short chain dehydrogenase BJD12_RS14280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS14280 PF03466 LysR substrate binding domain BJD12_RS14285 PF03358 NADPH-dependent FMN reductase BJD12_RS14295 PF01717 Cobalamin-independent synthase, Catalytic domain BJD12_RS14295 PF08267 Cobalamin-independent synthase, N-terminal domain BJD12_RS14300 PF03812 2-keto-3-deoxygluconate permease BJD12_RS14315 PF00106 short chain dehydrogenase BJD12_RS14320 PF00550 Phosphopantetheine attachment site BJD12_RS14320 PF08659 KR domain BJD12_RS14320 PF14765 Polyketide synthase dehydratase BJD12_RS14320 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS14320 PF16197 Ketoacyl-synthetase C-terminal extension BJD12_RS14320 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS14320 PF00698 Acyl transferase domain BJD12_RS14320 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS14325 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS14325 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS14325 PF00550 Phosphopantetheine attachment site BJD12_RS14325 PF00698 Acyl transferase domain BJD12_RS14325 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS14325 PF08659 KR domain BJD12_RS14325 PF14765 Polyketide synthase dehydratase BJD12_RS14325 PF16197 Ketoacyl-synthetase C-terminal extension BJD12_RS14340 PF05368 NmrA-like family BJD12_RS14345 PF01638 HxlR-like helix-turn-helix BJD12_RS14350 PF02203 Tar ligand binding domain homologue BJD12_RS14350 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS14350 PF00672 HAMP domain BJD12_RS14450 PF00589 Phage integrase family BJD12_RS14450 PF13495 Phage integrase, N-terminal SAM-like domain BJD12_RS14455 PF00920 Dehydratase family BJD12_RS14460 PF03692 Putative zinc- or iron-chelating domain BJD12_RS14465 PF00132 Bacterial transferase hexapeptide (six repeats) BJD12_RS14470 PF07690 Major Facilitator Superfamily BJD12_RS14475 PF11871 Domain of unknown function (DUF3391) BJD12_RS14475 PF01966 HD domain BJD12_RS14500 PF00171 Aldehyde dehydrogenase family BJD12_RS14505 PF12833 Helix-turn-helix domain BJD12_RS14510 PF01494 FAD binding domain BJD12_RS14520 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJD12_RS14520 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJD12_RS14525 PF00230 Major intrinsic protein BJD12_RS14530 PF01266 FAD dependent oxidoreductase BJD12_RS14530 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BJD12_RS14535 PF08220 DeoR-like helix-turn-helix domain BJD12_RS14535 PF00455 DeoR C terminal sensor domain BJD12_RS14540 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD12_RS14540 PF00970 Oxidoreductase FAD-binding domain BJD12_RS14550 PF00355 Rieske [2Fe-2S] domain BJD12_RS14555 PF01144 Coenzyme A transferase BJD12_RS14560 PF01144 Coenzyme A transferase BJD12_RS14565 PF00108 Thiolase, N-terminal domain BJD12_RS14565 PF02803 Thiolase, C-terminal domain BJD12_RS14570 PF00775 Dioxygenase BJD12_RS14570 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BJD12_RS14575 PF00775 Dioxygenase BJD12_RS14575 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal BJD12_RS14580 PF00206 Lyase BJD12_RS14580 PF10397 Adenylosuccinate lyase C-terminus BJD12_RS14585 PF12146 Serine aminopeptidase, S33 BJD12_RS14590 PF02627 Carboxymuconolactone decarboxylase family BJD12_RS14600 PF09339 IclR helix-turn-helix domain BJD12_RS14600 PF01614 Bacterial transcriptional regulator BJD12_RS14610 PF07859 alpha/beta hydrolase fold BJD12_RS14615 PF10677 Protein of unknown function (DUF2490) BJD12_RS14620 PF01134 Glucose inhibited division protein A BJD12_RS14620 PF13932 GidA associated domain BJD12_RS14630 PF00291 Pyridoxal-phosphate dependent enzyme BJD12_RS14650 PF13649 Methyltransferase domain BJD12_RS14660 PF12697 Alpha/beta hydrolase family BJD12_RS14670 PF00155 Aminotransferase class I and II BJD12_RS14675 PF04055 Radical SAM superfamily BJD12_RS14675 PF06968 Biotin and Thiamin Synthesis associated domain BJD12_RS14685 PF01040 UbiA prenyltransferase family BJD12_RS14695 PF03466 LysR substrate binding domain BJD12_RS14695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS14700 PF01810 LysE type translocator BJD12_RS14705 PF02203 Tar ligand binding domain homologue BJD12_RS14705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS14705 PF00672 HAMP domain BJD12_RS14720 PF12795 Mechanosensitive ion channel porin domain BJD12_RS14720 PF12794 Mechanosensitive ion channel inner membrane domain 1 BJD12_RS14720 PF00924 Mechanosensitive ion channel BJD12_RS14725 PF00884 Sulfatase BJD12_RS14735 PF03109 ABC1 family BJD12_RS14740 PF05661 Protein of unknown function (DUF808) BJD12_RS14745 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS14750 PF08323 Starch synthase catalytic domain BJD12_RS14750 PF00534 Glycosyl transferases group 1 BJD12_RS14755 PF02806 Alpha amylase, C-terminal all-beta domain BJD12_RS14755 PF00128 Alpha amylase, catalytic domain BJD12_RS14755 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD12_RS14760 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD12_RS14760 PF00128 Alpha amylase, catalytic domain BJD12_RS14760 PF11941 Domain of unknown function (DUF3459) BJD12_RS14765 PF02446 4-alpha-glucanotransferase BJD12_RS14770 PF00128 Alpha amylase, catalytic domain BJD12_RS14780 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BJD12_RS14780 PF00128 Alpha amylase, catalytic domain BJD12_RS14785 PF13460 NAD(P)H-binding BJD12_RS14805 PF06903 VirK protein BJD12_RS14810 PF02321 Outer membrane efflux protein BJD12_RS14815 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS14825 PF00873 AcrB/AcrD/AcrF family BJD12_RS14835 PF00106 short chain dehydrogenase BJD12_RS14840 PF01638 HxlR-like helix-turn-helix BJD12_RS14850 PF00270 DEAD/DEAH box helicase BJD12_RS14850 PF00271 Helicase conserved C-terminal domain BJD12_RS14865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD12_RS14865 PF00364 Biotin-requiring enzyme BJD12_RS14865 PF02817 e3 binding domain BJD12_RS14875 PF02780 Transketolase, C-terminal domain BJD12_RS14875 PF02779 Transketolase, pyrimidine binding domain BJD12_RS14880 PF00676 Dehydrogenase E1 component BJD12_RS14890 PF03301 Tryptophan 2,3-dioxygenase BJD12_RS14895 PF00854 POT family BJD12_RS14905 PF01047 MarR family BJD12_RS14910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD12_RS14915 PF04480 Protein of unknown function (DUF559) BJD12_RS14935 PF03334 Na+/H+ antiporter subunit BJD12_RS14940 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BJD12_RS14950 PF00361 Proton-conducting membrane transporter BJD12_RS14955 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BJD12_RS14960 PF00361 Proton-conducting membrane transporter BJD12_RS14960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BJD12_RS14960 PF13244 Domain of unknown function (DUF4040) BJD12_RS14960 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BJD12_RS14975 PF07504 Fungalysin/Thermolysin Propeptide Motif BJD12_RS14975 PF01447 Thermolysin metallopeptidase, catalytic domain BJD12_RS14975 PF01483 Proprotein convertase P-domain BJD12_RS14975 PF02868 Thermolysin metallopeptidase, alpha-helical domain BJD12_RS14990 PF01259 SAICAR synthetase BJD12_RS14995 PF00226 DnaJ domain BJD12_RS14995 PF01556 DnaJ C terminal domain BJD12_RS14995 PF00684 DnaJ central domain BJD12_RS15010 PF00834 Ribulose-phosphate 3 epimerase family BJD12_RS15015 PF00583 Acetyltransferase (GNAT) family BJD12_RS15020 PF00781 Diacylglycerol kinase catalytic domain BJD12_RS15025 PF04715 Anthranilate synthase component I, N terminal region BJD12_RS15025 PF00425 chorismate binding enzyme BJD12_RS15040 PF00117 Glutamine amidotransferase class-I BJD12_RS15050 PF02885 Glycosyl transferase family, helical bundle domain BJD12_RS15050 PF00591 Glycosyl transferase family, a/b domain BJD12_RS15055 PF00218 Indole-3-glycerol phosphate synthase BJD12_RS15065 PF00027 Cyclic nucleotide-binding domain BJD12_RS15065 PF00325 Bacterial regulatory proteins, crp family BJD12_RS15070 PF02675 S-adenosylmethionine decarboxylase BJD12_RS15075 PF00893 Small Multidrug Resistance protein BJD12_RS15080 PF03232 Ubiquinone biosynthesis protein COQ7 BJD12_RS15085 PF00572 Ribosomal protein L13 BJD12_RS15090 PF00380 Ribosomal protein S9/S16 BJD12_RS15105 PF00293 NUDIX domain BJD12_RS15115 PF00210 Ferritin-like domain BJD12_RS15120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS15120 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD12_RS15120 PF00072 Response regulator receiver domain BJD12_RS15120 PF01627 Hpt domain BJD12_RS15120 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS15120 PF00672 HAMP domain BJD12_RS15125 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS15125 PF00072 Response regulator receiver domain BJD12_RS15145 PF01521 Iron-sulphur cluster biosynthesis BJD12_RS15150 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain BJD12_RS15150 PF09297 NADH pyrophosphatase zinc ribbon domain BJD12_RS15150 PF00293 NUDIX domain BJD12_RS15155 PF03186 CobD/Cbib protein BJD12_RS15155 PF17113 Regulatory signalling modulator protein AmpE BJD12_RS15175 PF03466 LysR substrate binding domain BJD12_RS15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS15180 PF07690 Major Facilitator Superfamily BJD12_RS15185 PF12805 FUSC-like inner membrane protein yccS BJD12_RS15190 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BJD12_RS15190 PF02843 Phosphoribosylglycinamide synthetase, C domain BJD12_RS15190 PF02844 Phosphoribosylglycinamide synthetase, N domain BJD12_RS15200 PF02142 MGS-like domain BJD12_RS15200 PF01808 AICARFT/IMPCHase bienzyme BJD12_RS15205 PF01066 CDP-alcohol phosphatidyltransferase BJD12_RS15210 PF12147 Putative methyltransferase BJD12_RS15210 PF12146 Serine aminopeptidase, S33 BJD12_RS15215 PF00782 Dual specificity phosphatase, catalytic domain BJD12_RS15245 PF00818 Ice nucleation protein repeat BJD12_RS15245 PF00818 Ice nucleation protein repeat BJD12_RS15250 PF02954 Bacterial regulatory protein, Fis family BJD12_RS15260 PF01381 Helix-turn-helix BJD12_RS15285 PF02785 Biotin carboxylase C-terminal domain BJD12_RS15285 PF00289 Biotin carboxylase, N-terminal domain BJD12_RS15285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BJD12_RS15295 PF00364 Biotin-requiring enzyme BJD12_RS15300 PF01220 Dehydroquinase class II BJD12_RS15305 PF02683 Cytochrome C biogenesis protein transmembrane region BJD12_RS15305 PF11412 Disulphide bond corrector protein DsbC BJD12_RS15310 PF03091 CutA1 divalent ion tolerance protein BJD12_RS15315 PF04231 Endonuclease I BJD12_RS15320 PF00166 Chaperonin 10 Kd subunit BJD12_RS15325 PF00118 TCP-1/cpn60 chaperonin family BJD12_RS15340 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS15340 PF00593 TonB dependent receptor BJD12_RS15345 PF00793 DAHP synthetase I family BJD12_RS15350 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BJD12_RS15350 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BJD12_RS15365 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD12_RS15375 PF08335 GlnD PII-uridylyltransferase BJD12_RS15375 PF03710 Glutamate-ammonia ligase adenylyltransferase BJD12_RS15390 PF02129 X-Pro dipeptidyl-peptidase (S15 family) BJD12_RS15420 PF00881 Nitroreductase family BJD12_RS15425 PF04264 YceI-like domain BJD12_RS15440 PF16957 Malonate decarboxylase, alpha subunit, transporter BJD12_RS15445 PF06857 Malonate decarboxylase delta subunit (MdcD) BJD12_RS15450 PF01039 Carboxyl transferase domain BJD12_RS15460 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG BJD12_RS15465 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BJD12_RS15470 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS15470 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS15470 PF08659 KR domain BJD12_RS15470 PF00698 Acyl transferase domain BJD12_RS15470 PF16197 Ketoacyl-synthetase C-terminal extension BJD12_RS15470 PF00550 Phosphopantetheine attachment site BJD12_RS15480 PF00392 Bacterial regulatory proteins, gntR family BJD12_RS15480 PF07729 FCD domain BJD12_RS15520 PF07745 Glycosyl hydrolase family 53 BJD12_RS15525 PF00456 Transketolase, thiamine diphosphate binding domain BJD12_RS15525 PF17831 Pyruvate dehydrogenase E1 component middle domain BJD12_RS15530 PF00145 C-5 cytosine-specific DNA methylase BJD12_RS15535 PF00145 C-5 cytosine-specific DNA methylase BJD12_RS15555 PF01527 Transposase BJD12_RS15570 PF13276 HTH-like domain BJD12_RS15570 PF13333 Integrase core domain BJD12_RS15570 PF00665 Integrase core domain BJD12_RS15575 PF01527 Transposase BJD12_RS15595 PF01527 Transposase BJD12_RS15600 PF13333 Integrase core domain BJD12_RS15600 PF13276 HTH-like domain BJD12_RS15600 PF00665 Integrase core domain BJD12_RS15675 PF13409 Glutathione S-transferase, N-terminal domain BJD12_RS15705 PF01433 Peptidase family M1 domain BJD12_RS15705 PF11838 ERAP1-like C-terminal domain BJD12_RS15720 PF12823 Domain of unknown function (DUF3817) BJD12_RS15720 PF03176 MMPL family BJD12_RS15735 PF07759 Protein of unknown function (DUF1615) BJD12_RS15745 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS15750 PF02082 Transcriptional regulator BJD12_RS15755 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS15755 PF13192 Thioredoxin domain BJD12_RS15780 PF00892 EamA-like transporter family BJD12_RS15795 PF00324 Amino acid permease BJD12_RS15800 PF01544 CorA-like Mg2+ transporter protein BJD12_RS15820 PF01204 Trehalase BJD12_RS15830 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BJD12_RS15830 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BJD12_RS15860 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS15860 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS15860 PF00563 EAL domain BJD12_RS15865 PF00672 HAMP domain BJD12_RS15865 PF02203 Tar ligand binding domain homologue BJD12_RS15865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS15870 PF00150 Cellulase (glycosyl hydrolase family 5) BJD12_RS15870 PF00553 Cellulose binding domain BJD12_RS15875 PF01740 STAS domain BJD12_RS15875 PF00916 Sulfate permease family BJD12_RS15880 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS15920 PF13632 Glycosyl transferase family group 2 BJD12_RS15930 PF06580 Histidine kinase BJD12_RS15930 PF07694 5TMR of 5TMR-LYT BJD12_RS15935 PF04397 LytTr DNA-binding domain BJD12_RS15935 PF00072 Response regulator receiver domain BJD12_RS15940 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BJD12_RS15940 PF03900 Porphobilinogen deaminase, C-terminal domain BJD12_RS15970 PF00326 Prolyl oligopeptidase family BJD12_RS15970 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BJD12_RS15985 PF00155 Aminotransferase class I and II BJD12_RS15995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BJD12_RS15995 PF00326 Prolyl oligopeptidase family BJD12_RS16000 PF04304 Protein of unknown function (DUF454) BJD12_RS16010 PF01678 Diaminopimelate epimerase BJD12_RS16020 PF00589 Phage integrase family BJD12_RS16020 PF02899 Phage integrase, N-terminal SAM-like domain BJD12_RS16030 PF00227 Proteasome subunit BJD12_RS16035 PF10431 C-terminal, D2-small domain, of ClpB protein BJD12_RS16035 PF07724 AAA domain (Cdc48 subfamily) BJD12_RS16035 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS16050 PF13673 Acetyltransferase (GNAT) domain BJD12_RS16055 PF13533 Biotin-lipoyl like BJD12_RS16065 PF01209 ubiE/COQ5 methyltransferase family BJD12_RS16070 PF00563 EAL domain BJD12_RS16070 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS16070 PF03707 Bacterial signalling protein N terminal repeat BJD12_RS16075 PF11838 ERAP1-like C-terminal domain BJD12_RS16075 PF01433 Peptidase family M1 domain BJD12_RS16090 PF13360 PQQ-like domain BJD12_RS16095 PF00497 Bacterial extracellular solute-binding proteins, family 3 BJD12_RS16110 PF00107 Zinc-binding dehydrogenase BJD12_RS16110 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS16120 PF00158 Sigma-54 interaction domain BJD12_RS16120 PF01590 GAF domain BJD12_RS16120 PF02954 Bacterial regulatory protein, Fis family BJD12_RS16125 PF00294 pfkB family carbohydrate kinase BJD12_RS16135 PF04085 rod shape-determining protein MreC BJD12_RS16145 PF03717 Penicillin-binding Protein dimerisation domain BJD12_RS16145 PF00905 Penicillin binding protein transpeptidase domain BJD12_RS16150 PF01098 Cell cycle protein BJD12_RS16155 PF00295 Glycosyl hydrolases family 28 BJD12_RS16160 PF13406 Transglycosylase SLT domain BJD12_RS16165 PF05036 Sporulation related domain BJD12_RS16165 PF03330 Lytic transglycolase BJD12_RS16170 PF07943 Penicillin-binding protein 5, C-terminal domain BJD12_RS16170 PF00768 D-alanyl-D-alanine carboxypeptidase BJD12_RS16180 PF04359 Protein of unknown function (DUF493) BJD12_RS16185 PF03099 Biotin/lipoate A/B protein ligase family BJD12_RS16190 PF04055 Radical SAM superfamily BJD12_RS16190 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BJD12_RS16195 PF00595 PDZ domain BJD12_RS16195 PF03572 Peptidase family S41 BJD12_RS16195 PF11818 C-terminal domain of tail specific protease (DUF3340) BJD12_RS16195 PF17804 Tail specific protease N-terminal domain BJD12_RS16205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS16205 PF03466 LysR substrate binding domain BJD12_RS16215 PF01467 Cytidylyltransferase-like BJD12_RS16215 PF00293 NUDIX domain BJD12_RS16250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BJD12_RS16250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD12_RS16255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BJD12_RS16255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD12_RS16260 PF04972 BON domain BJD12_RS16265 PF01590 GAF domain BJD12_RS16265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS16265 PF00360 Phytochrome region BJD12_RS16265 PF08446 PAS fold BJD12_RS16265 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS16270 PF00072 Response regulator receiver domain BJD12_RS16275 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS16275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS16280 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJD12_RS16325 PF00263 Bacterial type II and III secretion system protein BJD12_RS16325 PF03958 Bacterial type II/III secretion system short domain BJD12_RS16330 PF00437 Type II/IV secretion system protein BJD12_RS16335 PF00482 Type II secretion system (T2SS), protein F BJD12_RS16340 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS16340 PF08334 Type II secretion system (T2SS), protein G BJD12_RS16345 PF12019 Type II transport protein GspH BJD12_RS16345 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS16350 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS16350 PF02501 Type II secretion system (T2SS), protein I BJD12_RS16355 PF11612 Type II secretion system (T2SS), protein J BJD12_RS16355 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS16360 PF03934 Type II secretion system (T2SS), protein K BJD12_RS16380 PF00392 Bacterial regulatory proteins, gntR family BJD12_RS16380 PF07702 UTRA domain BJD12_RS16385 PF07690 Major Facilitator Superfamily BJD12_RS16390 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS16395 PF01380 SIS domain BJD12_RS16400 PF01979 Amidohydrolase family BJD12_RS16415 PF01743 Poly A polymerase head domain BJD12_RS16415 PF01966 HD domain BJD12_RS16415 PF12627 Probable RNA and SrmB- binding site of polymerase A BJD12_RS16430 PF00133 tRNA synthetases class I (I, L, M and V) BJD12_RS16430 PF10458 Valyl tRNA synthetase tRNA binding arm BJD12_RS16430 PF08264 Anticodon-binding domain of tRNA BJD12_RS16445 PF02789 Cytosol aminopeptidase family, N-terminal domain BJD12_RS16445 PF00883 Cytosol aminopeptidase family, catalytic domain BJD12_RS16455 PF03739 Lipopolysaccharide export system permease LptF/LptG BJD12_RS16470 PF02899 Phage integrase, N-terminal SAM-like domain BJD12_RS16470 PF00589 Phage integrase family BJD12_RS16475 PF10411 Disulfide bond isomerase protein N-terminus BJD12_RS16475 PF13098 Thioredoxin-like domain BJD12_RS16485 PF02769 AIR synthase related protein, C-terminal domain BJD12_RS16485 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BJD12_RS16485 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BJD12_RS16495 PF13018 Extended Signal Peptide of Type V secretion system BJD12_RS16495 PF03895 YadA-like membrane anchor domain BJD12_RS16495 PF05658 Head domain of trimeric autotransporter adhesin BJD12_RS16495 PF05662 Coiled stalk of trimeric autotransporter adhesin BJD12_RS16500 PF00082 Subtilase family BJD12_RS16500 PF04151 Bacterial pre-peptidase C-terminal domain BJD12_RS16505 PF04151 Bacterial pre-peptidase C-terminal domain BJD12_RS16505 PF00082 Subtilase family BJD12_RS16510 PF00437 Type II/IV secretion system protein BJD12_RS16510 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BJD12_RS16515 PF00482 Type II secretion system (T2SS), protein F BJD12_RS16520 PF08334 Type II secretion system (T2SS), protein G BJD12_RS16525 PF12019 Type II transport protein GspH BJD12_RS16530 PF07963 Prokaryotic N-terminal methylation motif BJD12_RS16540 PF03934 Type II secretion system (T2SS), protein K BJD12_RS16545 PF05137 Fimbrial assembly protein (PilN) BJD12_RS16550 PF10741 Type II secretion system (T2SS), protein M subtype b BJD12_RS16560 PF00263 Bacterial type II and III secretion system protein BJD12_RS16560 PF03958 Bacterial type II/III secretion system short domain BJD12_RS16580 PF07702 UTRA domain BJD12_RS16580 PF00392 Bacterial regulatory proteins, gntR family BJD12_RS16590 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS16590 PF00593 TonB dependent receptor BJD12_RS16625 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BJD12_RS16625 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BJD12_RS16640 PF00535 Glycosyl transferase family 2 BJD12_RS16640 PF07238 PilZ domain BJD12_RS16640 PF03552 Cellulose synthase BJD12_RS16645 PF03170 Bacterial cellulose synthase subunit BJD12_RS16650 PF01270 Glycosyl hydrolases family 8 BJD12_RS16655 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BJD12_RS16670 PF03960 ArsC family BJD12_RS16675 PF01327 Polypeptide deformylase BJD12_RS16680 PF12848 ABC transporter BJD12_RS16680 PF00005 ABC transporter BJD12_RS16690 PF00464 Serine hydroxymethyltransferase BJD12_RS16695 PF03477 ATP cone domain BJD12_RS16705 PF01872 RibD C-terminal domain BJD12_RS16705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BJD12_RS16720 PF00677 Lumazine binding domain BJD12_RS16725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BJD12_RS16725 PF00925 GTP cyclohydrolase II BJD12_RS16730 PF00885 6,7-dimethyl-8-ribityllumazine synthase BJD12_RS16735 PF01029 NusB family BJD12_RS16740 PF02769 AIR synthase related protein, C-terminal domain BJD12_RS16740 PF00586 AIR synthase related protein, N-terminal domain BJD12_RS16765 PF03814 Potassium-transporting ATPase A subunit BJD12_RS16775 PF02669 K+-transporting ATPase, c chain BJD12_RS16780 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS16780 PF02702 Osmosensitive K+ channel His kinase sensor domain BJD12_RS16780 PF13493 Domain of unknown function (DUF4118) BJD12_RS16780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS16780 PF13492 GAF domain BJD12_RS16785 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS16785 PF00072 Response regulator receiver domain BJD12_RS16790 PF00326 Prolyl oligopeptidase family BJD12_RS16790 PF07676 WD40-like Beta Propeller Repeat BJD12_RS16795 PF02913 FAD linked oxidases, C-terminal domain BJD12_RS16795 PF01565 FAD binding domain BJD12_RS16800 PF04307 LexA-binding, inner membrane-associated putative hydrolase BJD12_RS16805 PF02021 Uncharacterised protein family UPF0102 BJD12_RS16815 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BJD12_RS16840 PF02381 MraZ protein, putative antitoxin-like BJD12_RS16845 PF01795 MraW methylase family BJD12_RS16850 PF04999 Cell division protein FtsL BJD12_RS16855 PF03717 Penicillin-binding Protein dimerisation domain BJD12_RS16855 PF00905 Penicillin binding protein transpeptidase domain BJD12_RS16860 PF08245 Mur ligase middle domain BJD12_RS16860 PF01225 Mur ligase family, catalytic domain BJD12_RS16860 PF02875 Mur ligase family, glutamate ligase domain BJD12_RS16865 PF01225 Mur ligase family, catalytic domain BJD12_RS16865 PF08245 Mur ligase middle domain BJD12_RS16865 PF02875 Mur ligase family, glutamate ligase domain BJD12_RS16870 PF00953 Glycosyl transferase family 4 BJD12_RS16875 PF01098 Cell cycle protein BJD12_RS16880 PF03033 Glycosyltransferase family 28 N-terminal domain BJD12_RS16880 PF04101 Glycosyltransferase family 28 C-terminal domain BJD12_RS16885 PF08245 Mur ligase middle domain BJD12_RS16885 PF02875 Mur ligase family, glutamate ligase domain BJD12_RS16885 PF01225 Mur ligase family, catalytic domain BJD12_RS16890 PF07478 D-ala D-ala ligase C-terminus BJD12_RS16890 PF01820 D-ala D-ala ligase N-terminus BJD12_RS16895 PF08478 POTRA domain, FtsQ-type BJD12_RS16895 PF03799 Cell division protein FtsQ BJD12_RS16900 PF02491 SHS2 domain inserted in FTSA BJD12_RS16905 PF00091 Tubulin/FtsZ family, GTPase domain BJD12_RS16905 PF12327 FtsZ family, C-terminal domain BJD12_RS16910 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BJD12_RS16920 PF08525 Opacity-associated protein A N-terminal motif BJD12_RS16920 PF01476 LysM domain BJD12_RS16920 PF01551 Peptidase family M23 BJD12_RS16925 PF07516 SecA Wing and Scaffold domain BJD12_RS16925 PF07517 SecA DEAD-like domain BJD12_RS16925 PF01043 SecA preprotein cross-linking domain BJD12_RS16925 PF02810 SEC-C motif BJD12_RS16940 PF00293 NUDIX domain BJD12_RS16955 PF02219 Methylenetetrahydrofolate reductase BJD12_RS16965 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS16965 PF00107 Zinc-binding dehydrogenase BJD12_RS16965 PF16197 Ketoacyl-synthetase C-terminal extension BJD12_RS16965 PF14765 Polyketide synthase dehydratase BJD12_RS16965 PF00550 Phosphopantetheine attachment site BJD12_RS16965 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS16965 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS16965 PF08659 KR domain BJD12_RS16965 PF00698 Acyl transferase domain BJD12_RS16980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD12_RS16995 PF00128 Alpha amylase, catalytic domain BJD12_RS17025 PF13649 Methyltransferase domain BJD12_RS17030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain BJD12_RS17030 PF05221 S-adenosyl-L-homocysteine hydrolase BJD12_RS17040 PF00311 Phosphoenolpyruvate carboxylase BJD12_RS17060 PF00223 Photosystem I psaA/psaB protein BJD12_RS17060 PF00691 OmpA family BJD12_RS17075 PF00328 Histidine phosphatase superfamily (branch 2) BJD12_RS17080 PF00438 S-adenosylmethionine synthetase, N-terminal domain BJD12_RS17080 PF02773 S-adenosylmethionine synthetase, C-terminal domain BJD12_RS17080 PF02772 S-adenosylmethionine synthetase, central domain BJD12_RS17090 PF01207 Dihydrouridine synthase (Dus) BJD12_RS17100 PF00294 pfkB family carbohydrate kinase BJD12_RS17105 PF07670 Nucleoside recognition BJD12_RS17105 PF07662 Na+ dependent nucleoside transporter C-terminus BJD12_RS17105 PF01773 Na+ dependent nucleoside transporter N-terminus BJD12_RS17110 PF00248 Aldo/keto reductase family BJD12_RS17120 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS17120 PF00593 TonB dependent receptor BJD12_RS17140 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS17145 PF00005 ABC transporter BJD12_RS17155 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BJD12_RS17165 PF00005 ABC transporter BJD12_RS17170 PF13472 GDSL-like Lipase/Acylhydrolase family BJD12_RS17175 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS17175 PF00072 Response regulator receiver domain BJD12_RS17180 PF08521 Two-component sensor kinase N-terminal BJD12_RS17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS17180 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS17190 PF01219 Prokaryotic diacylglycerol kinase BJD12_RS17200 PF04536 TPM domain BJD12_RS17210 PF01790 Prolipoprotein diacylglyceryl transferase BJD12_RS17215 PF00303 Thymidylate synthase BJD12_RS17225 PF00186 Dihydrofolate reductase BJD12_RS17230 PF00149 Calcineurin-like phosphoesterase BJD12_RS17235 PF04379 ApaG domain BJD12_RS17240 PF00398 Ribosomal RNA adenine dimethylase BJD12_RS17245 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BJD12_RS17250 PF00639 PPIC-type PPIASE domain BJD12_RS17250 PF09312 SurA N-terminal domain BJD12_RS17255 PF04453 LPS transport system D BJD12_RS17255 PF03968 OstA-like protein BJD12_RS17265 PF01923 Cobalamin adenosyltransferase BJD12_RS17275 PF01494 FAD binding domain BJD12_RS17280 PF01494 FAD binding domain BJD12_RS17300 PF07729 FCD domain BJD12_RS17300 PF00392 Bacterial regulatory proteins, gntR family BJD12_RS17305 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJD12_RS17310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BJD12_RS17310 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit BJD12_RS17315 PF03466 LysR substrate binding domain BJD12_RS17315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS17320 PF13193 AMP-binding enzyme C-terminal domain BJD12_RS17320 PF00501 AMP-binding enzyme BJD12_RS17325 PF00171 Aldehyde dehydrogenase family BJD12_RS17330 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS17355 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BJD12_RS17355 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BJD12_RS17360 PF01728 FtsJ-like methyltransferase BJD12_RS17360 PF18125 RlmM ferredoxin-like domain BJD12_RS17380 PF00892 EamA-like transporter family BJD12_RS17385 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BJD12_RS17385 PF00749 tRNA synthetases class I (E and Q), catalytic domain BJD12_RS17400 PF00072 Response regulator receiver domain BJD12_RS17400 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS17405 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS17405 PF01627 Hpt domain BJD12_RS17405 PF00072 Response regulator receiver domain BJD12_RS17405 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD12_RS17405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS17405 PF00672 HAMP domain BJD12_RS17410 PF00072 Response regulator receiver domain BJD12_RS17410 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS17420 PF01625 Peptide methionine sulfoxide reductase BJD12_RS17430 PF00923 Transaldolase/Fructose-6-phosphate aldolase BJD12_RS17435 PF14760 Rnk N-terminus BJD12_RS17435 PF01272 Transcription elongation factor, GreA/GreB, C-term BJD12_RS17440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS17440 PF03466 LysR substrate binding domain BJD12_RS17445 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS17445 PF13192 Thioredoxin domain BJD12_RS17450 PF10417 C-terminal domain of 1-Cys peroxiredoxin BJD12_RS17450 PF00578 AhpC/TSA family BJD12_RS17455 PF05175 Methyltransferase small domain BJD12_RS17455 PF17827 PrmC N-terminal domain BJD12_RS17460 PF00561 alpha/beta hydrolase fold BJD12_RS17470 PF00293 NUDIX domain BJD12_RS17475 PF01612 3'-5' exonuclease BJD12_RS17475 PF00476 DNA polymerase family A BJD12_RS17475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BJD12_RS17475 PF01367 5'-3' exonuclease, C-terminal SAM fold BJD12_RS17480 PF00881 Nitroreductase family BJD12_RS17505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BJD12_RS17505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BJD12_RS17505 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BJD12_RS17525 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BJD12_RS17530 PF02233 NAD(P) transhydrogenase beta subunit BJD12_RS17550 PF01063 Amino-transferase class IV BJD12_RS17555 PF04151 Bacterial pre-peptidase C-terminal domain BJD12_RS17555 PF00082 Subtilase family BJD12_RS17560 PF04151 Bacterial pre-peptidase C-terminal domain BJD12_RS17560 PF00082 Subtilase family BJD12_RS17565 PF04151 Bacterial pre-peptidase C-terminal domain BJD12_RS17565 PF00082 Subtilase family BJD12_RS17575 PF04073 Aminoacyl-tRNA editing domain BJD12_RS17590 PF03358 NADPH-dependent FMN reductase BJD12_RS17595 PF03631 Virulence factor BrkB BJD12_RS17600 PF08534 Redoxin BJD12_RS17605 PF00708 Acylphosphatase BJD12_RS17615 PF03976 Polyphosphate kinase 2 (PPK2) BJD12_RS17620 PF00994 Probable molybdopterin binding domain BJD12_RS17630 PF03462 PCRF domain BJD12_RS17630 PF00472 RF-1 domain BJD12_RS17635 PF01488 Shikimate / quinate 5-dehydrogenase BJD12_RS17635 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BJD12_RS17635 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BJD12_RS17645 PF03550 Outer membrane lipoprotein LolB BJD12_RS17650 PF00288 GHMP kinases N terminal domain BJD12_RS17650 PF08544 GHMP kinases C terminal BJD12_RS17660 PF14572 Phosphoribosyl synthetase-associated domain BJD12_RS17660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BJD12_RS17665 PF14693 Ribosomal protein TL5, C-terminal domain BJD12_RS17665 PF01386 Ribosomal L25p family BJD12_RS17670 PF01195 Peptidyl-tRNA hydrolase BJD12_RS17675 PF06071 Protein of unknown function (DUF933) BJD12_RS17675 PF01926 50S ribosome-binding GTPase BJD12_RS17680 PF00589 Phage integrase family BJD12_RS17680 PF13356 Arm DNA-binding domain BJD12_RS17700 PF01555 DNA methylase BJD12_RS17735 PF03143 Elongation factor Tu C-terminal domain BJD12_RS17735 PF03144 Elongation factor Tu domain 2 BJD12_RS17735 PF00009 Elongation factor Tu GTP binding domain BJD12_RS17745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BJD12_RS17750 PF02357 Transcription termination factor nusG BJD12_RS17750 PF00467 KOW motif BJD12_RS17755 PF00298 Ribosomal protein L11, RNA binding domain BJD12_RS17755 PF03946 Ribosomal protein L11, N-terminal domain BJD12_RS17760 PF00687 Ribosomal protein L1p/L10e family BJD12_RS17765 PF00466 Ribosomal protein L10 BJD12_RS17770 PF16320 Ribosomal protein L7/L12 dimerisation domain BJD12_RS17770 PF00542 Ribosomal protein L7/L12 C-terminal domain BJD12_RS17775 PF00562 RNA polymerase Rpb2, domain 6 BJD12_RS17775 PF04560 RNA polymerase Rpb2, domain 7 BJD12_RS17775 PF04565 RNA polymerase Rpb2, domain 3 BJD12_RS17775 PF10385 RNA polymerase beta subunit external 1 domain BJD12_RS17775 PF04561 RNA polymerase Rpb2, domain 2 BJD12_RS17775 PF04563 RNA polymerase beta subunit BJD12_RS17780 PF04998 RNA polymerase Rpb1, domain 5 BJD12_RS17780 PF04997 RNA polymerase Rpb1, domain 1 BJD12_RS17780 PF05000 RNA polymerase Rpb1, domain 4 BJD12_RS17780 PF00623 RNA polymerase Rpb1, domain 2 BJD12_RS17780 PF04983 RNA polymerase Rpb1, domain 3 BJD12_RS17785 PF00164 Ribosomal protein S12/S23 BJD12_RS17790 PF00177 Ribosomal protein S7p/S5e BJD12_RS17795 PF03764 Elongation factor G, domain IV BJD12_RS17795 PF00679 Elongation factor G C-terminus BJD12_RS17795 PF03144 Elongation factor Tu domain 2 BJD12_RS17795 PF00009 Elongation factor Tu GTP binding domain BJD12_RS17795 PF14492 Elongation Factor G, domain II BJD12_RS17800 PF03144 Elongation factor Tu domain 2 BJD12_RS17800 PF03143 Elongation factor Tu C-terminal domain BJD12_RS17800 PF00009 Elongation factor Tu GTP binding domain BJD12_RS17805 PF00338 Ribosomal protein S10p/S20e BJD12_RS17810 PF00297 Ribosomal protein L3 BJD12_RS17815 PF00573 Ribosomal protein L4/L1 family BJD12_RS17820 PF00276 Ribosomal protein L23 BJD12_RS17825 PF00181 Ribosomal Proteins L2, RNA binding domain BJD12_RS17825 PF03947 Ribosomal Proteins L2, C-terminal domain BJD12_RS17830 PF00203 Ribosomal protein S19 BJD12_RS17835 PF00237 Ribosomal protein L22p/L17e BJD12_RS17840 PF00189 Ribosomal protein S3, C-terminal domain BJD12_RS17840 PF07650 KH domain BJD12_RS17845 PF00252 Ribosomal protein L16p/L10e BJD12_RS17850 PF00831 Ribosomal L29 protein BJD12_RS17855 PF00366 Ribosomal protein S17 BJD12_RS17860 PF00238 Ribosomal protein L14p/L23e BJD12_RS17865 PF00467 KOW motif BJD12_RS17865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BJD12_RS17870 PF00281 Ribosomal protein L5 BJD12_RS17870 PF00673 ribosomal L5P family C-terminus BJD12_RS17875 PF00253 Ribosomal protein S14p/S29e BJD12_RS17880 PF00410 Ribosomal protein S8 BJD12_RS17885 PF00347 Ribosomal protein L6 BJD12_RS17890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BJD12_RS17895 PF00333 Ribosomal protein S5, N-terminal domain BJD12_RS17895 PF03719 Ribosomal protein S5, C-terminal domain BJD12_RS17900 PF00327 Ribosomal protein L30p/L7e BJD12_RS17905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BJD12_RS17910 PF00344 SecY translocase BJD12_RS17915 PF00416 Ribosomal protein S13/S18 BJD12_RS17920 PF00411 Ribosomal protein S11 BJD12_RS17925 PF01479 S4 domain BJD12_RS17925 PF00163 Ribosomal protein S4/S9 N-terminal domain BJD12_RS17930 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BJD12_RS17930 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BJD12_RS17930 PF01000 RNA polymerase Rpb3/RpoA insert domain BJD12_RS17935 PF01196 Ribosomal protein L17 BJD12_RS17940 PF02600 Disulfide bond formation protein DsbB BJD12_RS17950 PF01474 Class-II DAHP synthetase family BJD12_RS17960 PF01425 Amidase BJD12_RS17970 PF00679 Elongation factor G C-terminus BJD12_RS17970 PF03144 Elongation factor Tu domain 2 BJD12_RS17970 PF00009 Elongation factor Tu GTP binding domain BJD12_RS17975 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BJD12_RS17980 PF00056 lactate/malate dehydrogenase, NAD binding domain BJD12_RS17980 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BJD12_RS17985 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS17985 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS18000 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS18000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD12_RS18005 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS18005 PF00107 Zinc-binding dehydrogenase BJD12_RS18015 PF00691 OmpA family BJD12_RS18015 PF00223 Photosystem I psaA/psaB protein BJD12_RS18025 PF00849 RNA pseudouridylate synthase BJD12_RS18035 PF00155 Aminotransferase class I and II BJD12_RS18045 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS18050 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS18055 PF17850 CysA C-terminal regulatory domain BJD12_RS18055 PF12857 TOBE-like domain BJD12_RS18055 PF00005 ABC transporter BJD12_RS18070 PF00107 Zinc-binding dehydrogenase BJD12_RS18070 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS18080 PF05506 Domain of unknown function (DUF756) BJD12_RS18080 PF04185 Phosphoesterase family BJD12_RS18090 PF00300 Histidine phosphatase superfamily (branch 1) BJD12_RS18100 PF02875 Mur ligase family, glutamate ligase domain BJD12_RS18100 PF08245 Mur ligase middle domain BJD12_RS18115 PF00156 Phosphoribosyl transferase domain BJD12_RS18120 PF04305 Protein of unknown function (DUF455) BJD12_RS18135 PF00149 Calcineurin-like phosphoesterase BJD12_RS18140 PF01569 PAP2 superfamily BJD12_RS18150 PF02541 Ppx/GppA phosphatase family BJD12_RS18155 PF17941 Polyphosphate kinase C-terminal domain 1 BJD12_RS18155 PF13090 Polyphosphate kinase C-terminal domain 2 BJD12_RS18155 PF13089 Polyphosphate kinase N-terminal domain BJD12_RS18155 PF02503 Polyphosphate kinase middle domain BJD12_RS18160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS18160 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS18160 PF00989 PAS fold BJD12_RS18160 PF11808 Phosphate regulon sensor protein PhoR BJD12_RS18165 PF00072 Response regulator receiver domain BJD12_RS18165 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS18170 PF01435 Peptidase family M48 BJD12_RS18170 PF13181 Tetratricopeptide repeat BJD12_RS18175 PF00462 Glutaredoxin BJD12_RS18185 PF18324 Hypothetical protein TT1725 BJD12_RS18185 PF00180 Isocitrate/isopropylmalate dehydrogenase BJD12_RS18315 PF10410 DnaB-helicase binding domain of primase BJD12_RS18315 PF08275 DNA primase catalytic core, N-terminal domain BJD12_RS18315 PF01807 CHC2 zinc finger BJD12_RS18355 PF00574 Clp protease BJD12_RS18505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS18505 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS18505 PF00989 PAS fold BJD12_RS18515 PF05698 Bacterial trigger factor protein (TF) C-terminus BJD12_RS18515 PF05697 Bacterial trigger factor protein (TF) BJD12_RS18520 PF00574 Clp protease BJD12_RS18525 PF10431 C-terminal, D2-small domain, of ClpB protein BJD12_RS18525 PF06689 ClpX C4-type zinc finger BJD12_RS18525 PF07724 AAA domain (Cdc48 subfamily) BJD12_RS18530 PF02190 ATP-dependent protease La (LON) substrate-binding domain BJD12_RS18530 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS18530 PF05362 Lon protease (S16) C-terminal proteolytic domain BJD12_RS18535 PF00216 Bacterial DNA-binding protein BJD12_RS18565 PF00753 Metallo-beta-lactamase superfamily BJD12_RS18565 PF16123 Hydroxyacylglutathione hydrolase C-terminus BJD12_RS18575 PF00075 RNase H BJD12_RS18580 PF00929 Exonuclease BJD12_RS18600 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BJD12_RS18610 PF12706 Beta-lactamase superfamily domain BJD12_RS18610 PF00753 Metallo-beta-lactamase superfamily BJD12_RS18615 PF06463 Molybdenum Cofactor Synthesis C BJD12_RS18615 PF04055 Radical SAM superfamily BJD12_RS18625 PF01967 MoaC family BJD12_RS18630 PF02597 ThiS family BJD12_RS18635 PF02391 MoaE protein BJD12_RS18645 PF00589 Phage integrase family BJD12_RS18645 PF13356 Arm DNA-binding domain BJD12_RS18675 PF04002 RadC-like JAB domain BJD12_RS18715 PF05598 Transposase domain (DUF772) BJD12_RS18715 PF01609 Transposase DDE domain BJD12_RS18785 PF12170 DNA polymerase III tau subunit V interacting with alpha BJD12_RS18785 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BJD12_RS18785 PF12169 DNA polymerase III subunits gamma and tau domain III BJD12_RS18790 PF02575 YbaB/EbfC DNA-binding family BJD12_RS18795 PF02132 RecR protein BJD12_RS18795 PF13662 Toprim domain BJD12_RS18800 PF01230 HIT domain BJD12_RS18810 PF13559 Domain of unknown function (DUF4129) BJD12_RS18810 PF01841 Transglutaminase-like superfamily BJD12_RS18810 PF11992 Domain of unknown function (DUF3488) BJD12_RS18820 PF17863 AAA lid domain BJD12_RS18820 PF07726 ATPase family associated with various cellular activities (AAA) BJD12_RS18840 PF02545 Maf-like protein BJD12_RS18845 PF02620 Large ribosomal RNA subunit accumulation protein YceD BJD12_RS18850 PF01783 Ribosomal L32p protein family BJD12_RS18855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BJD12_RS18855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BJD12_RS18860 PF00698 Acyl transferase domain BJD12_RS18870 PF00550 Phosphopantetheine attachment site BJD12_RS18875 PF02801 Beta-ketoacyl synthase, C-terminal domain BJD12_RS18875 PF00109 Beta-ketoacyl synthase, N-terminal domain BJD12_RS18880 PF04715 Anthranilate synthase component I, N terminal region BJD12_RS18880 PF00425 chorismate binding enzyme BJD12_RS18885 PF02618 YceG-like family BJD12_RS18890 PF09115 DNA polymerase III, delta subunit, C terminal BJD12_RS18910 PF06506 Propionate catabolism activator BJD12_RS18910 PF00158 Sigma-54 interaction domain BJD12_RS18910 PF02954 Bacterial regulatory protein, Fis family BJD12_RS18920 PF00285 Citrate synthase, C-terminal domain BJD12_RS18925 PF00694 Aconitase C-terminal domain BJD12_RS18925 PF00330 Aconitase family (aconitate hydratase) BJD12_RS18935 PF04303 PrpF protein BJD12_RS18940 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS18940 PF00593 TonB dependent receptor BJD12_RS18955 PF01835 MG2 domain BJD12_RS18955 PF17962 Bacterial macroglobulin domain 6 BJD12_RS18955 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BJD12_RS18955 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BJD12_RS18955 PF00207 Alpha-2-macroglobulin family BJD12_RS18955 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BJD12_RS18955 PF07703 Alpha-2-macroglobulin bait region domain BJD12_RS18955 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BJD12_RS19000 PF00905 Penicillin binding protein transpeptidase domain BJD12_RS19000 PF00912 Transglycosylase BJD12_RS19000 PF06832 Penicillin-Binding Protein C-terminus Family BJD12_RS19010 PF08534 Redoxin BJD12_RS19020 PF00226 DnaJ domain BJD12_RS19020 PF01556 DnaJ C terminal domain BJD12_RS19025 PF00072 Response regulator receiver domain BJD12_RS19030 PF12221 Bacterial membrane protein N terminal BJD12_RS19030 PF01145 SPFH domain / Band 7 family BJD12_RS19035 PF01145 SPFH domain / Band 7 family BJD12_RS19040 PF00709 Adenylosuccinate synthetase BJD12_RS19045 PF01433 Peptidase family M1 domain BJD12_RS19090 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BJD12_RS19090 PF04851 Type III restriction enzyme, res subunit BJD12_RS19090 PF08463 EcoEI R protein C-terminal BJD12_RS19090 PF00271 Helicase conserved C-terminal domain BJD12_RS19105 PF02384 N-6 DNA Methylase BJD12_RS19105 PF12161 HsdM N-terminal domain BJD12_RS19110 PF01420 Type I restriction modification DNA specificity domain BJD12_RS19135 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS19135 PF13977 BetI-type transcriptional repressor, C-terminal BJD12_RS19140 PF00300 Histidine phosphatase superfamily (branch 1) BJD12_RS19140 PF13456 Reverse transcriptase-like BJD12_RS19145 PF01256 Carbohydrate kinase BJD12_RS19155 PF00723 Glycosyl hydrolases family 15 BJD12_RS19170 PF07971 Glycosyl hydrolase family 92 BJD12_RS19170 PF17678 Glycosyl hydrolase family 92 N-terminal domain BJD12_RS19180 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS19215 PF17755 UvrA DNA-binding domain BJD12_RS19225 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS19225 PF14310 Fibronectin type III-like domain BJD12_RS19225 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD12_RS19230 PF08240 Alcohol dehydrogenase GroES-like domain BJD12_RS19230 PF00107 Zinc-binding dehydrogenase BJD12_RS19235 PF00440 Bacterial regulatory proteins, tetR family BJD12_RS19240 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain BJD12_RS19240 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase BJD12_RS19245 PF00941 FAD binding domain in molybdopterin dehydrogenase BJD12_RS19245 PF03450 CO dehydrogenase flavoprotein C-terminal domain BJD12_RS19250 PF00111 2Fe-2S iron-sulfur cluster binding domain BJD12_RS19250 PF01799 [2Fe-2S] binding domain BJD12_RS19275 PF01726 LexA DNA binding domain BJD12_RS19275 PF00717 Peptidase S24-like BJD12_RS19295 PF02811 PHP domain BJD12_RS19295 PF14579 Helix-hairpin-helix motif BJD12_RS19295 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD12_RS19295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD12_RS19310 PF03169 OPT oligopeptide transporter protein BJD12_RS19320 PF07676 WD40-like Beta Propeller Repeat BJD12_RS19320 PF00326 Prolyl oligopeptidase family BJD12_RS19320 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region BJD12_RS19335 PF12833 Helix-turn-helix domain BJD12_RS19335 PF02311 AraC-like ligand binding domain BJD12_RS19345 PF06628 Catalase-related immune-responsive BJD12_RS19345 PF00199 Catalase BJD12_RS19345 PF18011 C-terminal domain found in long catalases BJD12_RS19350 PF00248 Aldo/keto reductase family BJD12_RS19355 PF00135 Carboxylesterase family BJD12_RS19360 PF02347 Glycine cleavage system P-protein BJD12_RS19365 PF07690 Major Facilitator Superfamily BJD12_RS19385 PF08019 Phosphoethanolamine transferase EptA/EptB BJD12_RS19385 PF00884 Sulfatase BJD12_RS19400 PF00072 Response regulator receiver domain BJD12_RS19400 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS19405 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS19415 PF03776 Septum formation topological specificity factor MinE BJD12_RS19420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BJD12_RS19425 PF03775 Septum formation inhibitor MinC, C-terminal domain BJD12_RS19425 PF05209 Septum formation inhibitor MinC, N-terminal domain BJD12_RS19435 PF07730 Histidine kinase BJD12_RS19440 PF00196 Bacterial regulatory proteins, luxR family BJD12_RS19440 PF00072 Response regulator receiver domain BJD12_RS19455 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD12_RS19485 PF02222 ATP-grasp domain BJD12_RS19505 PF04376 Arginine-tRNA-protein transferase, N terminus BJD12_RS19505 PF04377 Arginine-tRNA-protein transferase, C terminus BJD12_RS19530 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS19540 PF17755 UvrA DNA-binding domain BJD12_RS19540 PF00005 ABC transporter BJD12_RS19540 PF17760 UvrA interaction domain BJD12_RS19545 PF00829 Ribosomal prokaryotic L21 protein BJD12_RS19550 PF01016 Ribosomal L27 protein BJD12_RS19555 PF01018 GTP1/OBG BJD12_RS19555 PF01926 50S ribosome-binding GTPase BJD12_RS19560 PF01649 Ribosomal protein S20 BJD12_RS19565 PF03023 Lipid II flippase MurJ BJD12_RS19570 PF01687 Riboflavin kinase BJD12_RS19570 PF06574 FAD synthetase BJD12_RS19575 PF08264 Anticodon-binding domain of tRNA BJD12_RS19575 PF06827 Zinc finger found in FPG and IleRS BJD12_RS19575 PF00133 tRNA synthetases class I (I, L, M and V) BJD12_RS19580 PF01252 Signal peptidase (SPase) II BJD12_RS19585 PF02401 LytB protein BJD12_RS19600 PF00115 Cytochrome C and Quinol oxidase polypeptide I BJD12_RS19605 PF00510 Cytochrome c oxidase subunit III BJD12_RS19610 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BJD12_RS19620 PF18073 Rubredoxin metal binding domain BJD12_RS19625 PF05656 Protein of unknown function (DUF805) BJD12_RS19635 PF12833 Helix-turn-helix domain BJD12_RS19640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS19640 PF00183 Hsp90 protein BJD12_RS19650 PF01740 STAS domain BJD12_RS19650 PF08678 Rsbr N terminal BJD12_RS19655 PF01740 STAS domain BJD12_RS19660 PF13581 Histidine kinase-like ATPase domain BJD12_RS19670 PF00672 HAMP domain BJD12_RS19670 PF17149 Periplasmic sensor domain found in signal transduction proteins BJD12_RS19670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS19670 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS19670 PF01627 Hpt domain BJD12_RS19670 PF00072 Response regulator receiver domain BJD12_RS19675 PF13188 PAS domain BJD12_RS19675 PF08448 PAS fold BJD12_RS19675 PF00072 Response regulator receiver domain BJD12_RS19675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS19675 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS19680 PF04616 Glycosyl hydrolases family 43 BJD12_RS19680 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BJD12_RS19685 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS19685 PF00593 TonB dependent receptor BJD12_RS19690 PF00085 Thioredoxin BJD12_RS19695 PF07237 Protein of unknown function (DUF1428) BJD12_RS19700 PF00072 Response regulator receiver domain BJD12_RS19700 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS19705 PF01339 CheB methylesterase BJD12_RS19710 PF01739 CheR methyltransferase, SAM binding domain BJD12_RS19710 PF03705 CheR methyltransferase, all-alpha domain BJD12_RS19715 PF00672 HAMP domain BJD12_RS19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS19715 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS19715 PF01627 Hpt domain BJD12_RS19715 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BJD12_RS19715 PF00072 Response regulator receiver domain BJD12_RS19720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS19720 PF00072 Response regulator receiver domain BJD12_RS19720 PF13426 PAS domain BJD12_RS19725 PF00072 Response regulator receiver domain BJD12_RS19730 PF00722 Glycosyl hydrolases family 16 BJD12_RS19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS19740 PF03466 LysR substrate binding domain BJD12_RS19745 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BJD12_RS19750 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BJD12_RS19755 PF01263 Aldose 1-epimerase BJD12_RS19760 PF01578 Cytochrome C assembly protein BJD12_RS19765 PF00448 SRP54-type protein, GTPase domain BJD12_RS19765 PF02881 SRP54-type protein, helical bundle domain BJD12_RS19765 PF02978 Signal peptide binding domain BJD12_RS19770 PF10077 Uncharacterized protein conserved in bacteria (DUF2314) BJD12_RS19775 PF03060 Nitronate monooxygenase BJD12_RS19785 PF00886 Ribosomal protein S16 BJD12_RS19790 PF05239 PRC-barrel domain BJD12_RS19790 PF01782 RimM N-terminal domain BJD12_RS19795 PF01746 tRNA (Guanine-1)-methyltransferase BJD12_RS19800 PF01245 Ribosomal protein L19 BJD12_RS19805 PF01554 MatE BJD12_RS19810 PF01479 S4 domain BJD12_RS19815 PF00141 Peroxidase BJD12_RS19825 PF01624 MutS domain I BJD12_RS19825 PF05188 MutS domain II BJD12_RS19825 PF05192 MutS domain III BJD12_RS19825 PF05190 MutS family domain IV BJD12_RS19825 PF00488 MutS domain V BJD12_RS19835 PF13333 Integrase core domain BJD12_RS19835 PF13276 HTH-like domain BJD12_RS19835 PF00665 Integrase core domain BJD12_RS19840 PF01527 Transposase BJD12_RS19885 PF02743 Cache domain BJD12_RS19885 PF00672 HAMP domain BJD12_RS19885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS19905 PF00703 Glycosyl hydrolases family 2 BJD12_RS19905 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 BJD12_RS19905 PF02837 Glycosyl hydrolases family 2, sugar binding domain BJD12_RS19905 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BJD12_RS19905 PF16355 Domain of unknown function (DUF4982) BJD12_RS19910 PF07745 Glycosyl hydrolase family 53 BJD12_RS19920 PF09856 Predicted transcriptional regulator (DUF2083) BJD12_RS19920 PF01381 Helix-turn-helix BJD12_RS19920 PF06114 IrrE N-terminal-like domain BJD12_RS19925 PF00171 Aldehyde dehydrogenase family BJD12_RS19930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD12_RS19930 PF02770 Acyl-CoA dehydrogenase, middle domain BJD12_RS19930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD12_RS19935 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS19940 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS19940 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD12_RS19940 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD12_RS19945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BJD12_RS19945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BJD12_RS19950 PF01545 Cation efflux family BJD12_RS19960 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BJD12_RS19960 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS19960 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BJD12_RS19965 PF08281 Sigma-70, region 4 BJD12_RS19965 PF04542 Sigma-70 region 2 BJD12_RS19975 PF13180 PDZ domain BJD12_RS19980 PF00679 Elongation factor G C-terminus BJD12_RS19980 PF03144 Elongation factor Tu domain 2 BJD12_RS19980 PF06421 GTP-binding protein LepA C-terminus BJD12_RS19980 PF00009 Elongation factor Tu GTP binding domain BJD12_RS19985 PF10502 Signal peptidase, peptidase S26 BJD12_RS19995 PF00035 Double-stranded RNA binding motif BJD12_RS19995 PF14622 Ribonuclease-III-like BJD12_RS20000 PF07650 KH domain BJD12_RS20000 PF01926 50S ribosome-binding GTPase BJD12_RS20010 PF02565 Recombination protein O C terminal BJD12_RS20010 PF11967 Recombination protein O N terminal BJD12_RS20020 PF05958 tRNA (Uracil-5-)-methyltransferase BJD12_RS20030 PF01928 CYTH domain BJD12_RS20035 PF01323 DSBA-like thioredoxin domain BJD12_RS20040 PF01593 Flavin containing amine oxidoreductase BJD12_RS20045 PF04244 Deoxyribodipyrimidine photo-lyase-related protein BJD12_RS20050 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS20055 PF00156 Phosphoribosyl transferase domain BJD12_RS20060 PF01048 Phosphorylase superfamily BJD12_RS20065 PF00313 'Cold-shock' DNA-binding domain BJD12_RS20070 PF01494 FAD binding domain BJD12_RS20080 PF00271 Helicase conserved C-terminal domain BJD12_RS20080 PF08494 DEAD/H associated BJD12_RS20080 PF00270 DEAD/DEAH box helicase BJD12_RS20085 PF04679 ATP dependent DNA ligase C terminal region BJD12_RS20085 PF04675 DNA ligase N terminus BJD12_RS20085 PF01068 ATP dependent DNA ligase domain BJD12_RS20095 PF01068 ATP dependent DNA ligase domain BJD12_RS20095 PF04675 DNA ligase N terminus BJD12_RS20095 PF04679 ATP dependent DNA ligase C terminal region BJD12_RS20110 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS20110 PF00072 Response regulator receiver domain BJD12_RS20125 PF00108 Thiolase, N-terminal domain BJD12_RS20125 PF02803 Thiolase, C-terminal domain BJD12_RS20130 PF12951 Passenger-associated-transport-repeat BJD12_RS20130 PF03797 Autotransporter beta-domain BJD12_RS20130 PF00082 Subtilase family BJD12_RS20135 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BJD12_RS20135 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BJD12_RS20145 PF01863 Protein of unknown function DUF45 BJD12_RS20150 PF07043 Protein of unknown function (DUF1328) BJD12_RS20160 PF01258 Prokaryotic dksA/traR C4-type zinc finger BJD12_RS20175 PF08281 Sigma-70, region 4 BJD12_RS20175 PF04542 Sigma-70 region 2 BJD12_RS20200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD12_RS20210 PF08274 PhnA Zinc-Ribbon BJD12_RS20210 PF03831 PhnA domain BJD12_RS20225 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BJD12_RS20230 PF07690 Major Facilitator Superfamily BJD12_RS20265 PF09924 Uncharacterised conserved protein (DUF2156) BJD12_RS20265 PF03706 Lysylphosphatidylglycerol synthase TM region BJD12_RS20275 PF01042 Endoribonuclease L-PSP BJD12_RS20320 PF04545 Sigma-70, region 4 BJD12_RS20320 PF04542 Sigma-70 region 2 BJD12_RS20335 PF04060 Putative Fe-S cluster BJD12_RS20345 PF09334 tRNA synthetases class I (M) BJD12_RS20345 PF01588 Putative tRNA binding domain BJD12_RS20365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BJD12_RS20370 PF00324 Amino acid permease BJD12_RS20375 PF02574 Homocysteine S-methyltransferase BJD12_RS20385 PF02592 Putative vitamin uptake transporter BJD12_RS20410 PF03551 Transcriptional regulator PadR-like family BJD12_RS20430 PF03653 Uncharacterised protein family (UPF0093) BJD12_RS20440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BJD12_RS20445 PF07733 Bacterial DNA polymerase III alpha NTPase domain BJD12_RS20445 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BJD12_RS20445 PF02811 PHP domain BJD12_RS20445 PF01336 OB-fold nucleic acid binding domain BJD12_RS20445 PF14579 Helix-hairpin-helix motif BJD12_RS20450 PF01351 Ribonuclease HII BJD12_RS20455 PF02684 Lipid-A-disaccharide synthetase BJD12_RS20460 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BJD12_RS20460 PF00132 Bacterial transferase hexapeptide (six repeats) BJD12_RS20465 PF07977 FabA-like domain BJD12_RS20470 PF00132 Bacterial transferase hexapeptide (six repeats) BJD12_RS20470 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BJD12_RS20480 PF07244 Surface antigen variable number repeat BJD12_RS20480 PF01103 Surface antigen BJD12_RS20485 PF02163 Peptidase family M50 BJD12_RS20485 PF17820 PDZ domain BJD12_RS20490 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BJD12_RS20490 PF13288 DXP reductoisomerase C-terminal domain BJD12_RS20490 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BJD12_RS20500 PF01255 Putative undecaprenyl diphosphate synthase BJD12_RS20505 PF01765 Ribosome recycling factor BJD12_RS20510 PF00696 Amino acid kinase family BJD12_RS20515 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS20520 PF00889 Elongation factor TS BJD12_RS20525 PF00318 Ribosomal protein S2 BJD12_RS20560 PF00557 Metallopeptidase family M24 BJD12_RS20565 PF01909 Nucleotidyltransferase domain BJD12_RS20565 PF01966 HD domain BJD12_RS20565 PF08335 GlnD PII-uridylyltransferase BJD12_RS20570 PF14602 Hexapeptide repeat of succinyl-transferase BJD12_RS20570 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BJD12_RS20570 PF00132 Bacterial transferase hexapeptide (six repeats) BJD12_RS20580 PF03960 ArsC family BJD12_RS20585 PF01546 Peptidase family M20/M25/M40 BJD12_RS20585 PF07687 Peptidase dimerisation domain BJD12_RS20590 PF13537 Glutamine amidotransferase domain BJD12_RS20590 PF00733 Asparagine synthase BJD12_RS20600 PF07660 Secretin and TonB N terminus short domain BJD12_RS20600 PF00593 TonB dependent receptor BJD12_RS20600 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS20605 PF01804 Penicillin amidase BJD12_RS20610 PF00210 Ferritin-like domain BJD12_RS20615 PF05724 Thiopurine S-methyltransferase (TPMT) BJD12_RS20625 PF00521 DNA gyrase/topoisomerase IV, subunit A BJD12_RS20625 PF03989 DNA gyrase C-terminal domain, beta-propeller BJD12_RS20640 PF02321 Outer membrane efflux protein BJD12_RS20645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS20645 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS20650 PF07690 Major Facilitator Superfamily BJD12_RS20665 PF14310 Fibronectin type III-like domain BJD12_RS20665 PF00933 Glycosyl hydrolase family 3 N terminal domain BJD12_RS20665 PF01915 Glycosyl hydrolase family 3 C-terminal domain BJD12_RS20675 PF00854 POT family BJD12_RS20700 PF12802 MarR family BJD12_RS20705 PF01432 Peptidase family M3 BJD12_RS20710 PF00255 Glutathione peroxidase BJD12_RS20715 PF00175 Oxidoreductase NAD-binding domain BJD12_RS20715 PF00970 Oxidoreductase FAD-binding domain BJD12_RS20720 PF00005 ABC transporter BJD12_RS20735 PF05683 Fumarase C-terminus BJD12_RS20735 PF05681 Fumarate hydratase (Fumerase) BJD12_RS20750 PF00484 Carbonic anhydrase BJD12_RS20755 PF02253 Phospholipase A1 BJD12_RS20765 PF00313 'Cold-shock' DNA-binding domain BJD12_RS20780 PF00899 ThiF family BJD12_RS20785 PF01026 TatD related DNase BJD12_RS20800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD12_RS20800 PF02770 Acyl-CoA dehydrogenase, middle domain BJD12_RS20800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD12_RS20810 PF00043 Glutathione S-transferase, C-terminal domain BJD12_RS20810 PF02798 Glutathione S-transferase, N-terminal domain BJD12_RS20815 PF13537 Glutamine amidotransferase domain BJD12_RS20815 PF00733 Asparagine synthase BJD12_RS20820 PF03358 NADPH-dependent FMN reductase BJD12_RS20825 PF03796 DnaB-like helicase C terminal domain BJD12_RS20825 PF00772 DnaB-like helicase N terminal domain BJD12_RS20830 PF00875 DNA photolyase BJD12_RS20830 PF03441 FAD binding domain of DNA photolyase BJD12_RS20840 PF05736 OprF membrane domain BJD12_RS20840 PF00691 OmpA family BJD12_RS20845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS20845 PF03466 LysR substrate binding domain BJD12_RS20860 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS20860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS20865 PF00873 AcrB/AcrD/AcrF family BJD12_RS20870 PF00106 short chain dehydrogenase BJD12_RS20875 PF02321 Outer membrane efflux protein BJD12_RS20880 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS20890 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS20905 PF00082 Subtilase family BJD12_RS20910 PF01668 SmpB protein BJD12_RS20920 PF03658 RnfH family Ubiquitin BJD12_RS20925 PF04355 SmpA / OmlA family BJD12_RS20930 PF01475 Ferric uptake regulator family BJD12_RS20935 PF02463 RecF/RecN/SMC N terminal domain BJD12_RS20940 PF01628 HrcA protein C terminal domain BJD12_RS20940 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding BJD12_RS20945 PF01025 GrpE BJD12_RS20950 PF00012 Hsp70 protein BJD12_RS20955 PF01556 DnaJ C terminal domain BJD12_RS20955 PF00226 DnaJ domain BJD12_RS20955 PF00684 DnaJ central domain BJD12_RS20960 PF08543 Phosphomethylpyrimidine kinase BJD12_RS20985 PF00005 ABC transporter BJD12_RS20985 PF00664 ABC transporter transmembrane region BJD12_RS20985 PF03412 Peptidase C39 family BJD12_RS20990 PF03466 LysR substrate binding domain BJD12_RS20990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS20995 PF00664 ABC transporter transmembrane region BJD12_RS20995 PF00005 ABC transporter BJD12_RS21000 PF01205 Uncharacterized protein family UPF0029 BJD12_RS21005 PF03641 Possible lysine decarboxylase BJD12_RS21010 PF07992 Pyridine nucleotide-disulphide oxidoreductase BJD12_RS21010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BJD12_RS21015 PF00364 Biotin-requiring enzyme BJD12_RS21015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BJD12_RS21015 PF02817 e3 binding domain BJD12_RS21020 PF00676 Dehydrogenase E1 component BJD12_RS21020 PF16870 2-oxoglutarate dehydrogenase C-terminal BJD12_RS21020 PF16078 2-oxoglutarate dehydrogenase N-terminus BJD12_RS21020 PF02779 Transketolase, pyrimidine binding domain BJD12_RS21030 PF08007 Cupin superfamily protein BJD12_RS21040 PF00206 Lyase BJD12_RS21040 PF08328 Adenylosuccinate lyase C-terminal BJD12_RS21045 PF00571 CBS domain BJD12_RS21045 PF03471 Transporter associated domain BJD12_RS21045 PF01595 Cyclin M transmembrane N-terminal domain BJD12_RS21050 PF10415 Fumarase C C-terminus BJD12_RS21050 PF00206 Lyase BJD12_RS21075 PF00005 ABC transporter BJD12_RS21080 PF00392 Bacterial regulatory proteins, gntR family BJD12_RS21090 PF00255 Glutathione peroxidase BJD12_RS21095 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD12_RS21095 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD12_RS21100 PF04102 SlyX BJD12_RS21115 PF00356 Bacterial regulatory proteins, lacI family BJD12_RS21120 PF07690 Major Facilitator Superfamily BJD12_RS21125 PF00294 pfkB family carbohydrate kinase BJD12_RS21135 PF02310 B12 binding domain BJD12_RS21135 PF02607 B12 binding domain BJD12_RS21135 PF00809 Pterin binding enzyme BJD12_RS21135 PF02574 Homocysteine S-methyltransferase BJD12_RS21135 PF02965 Vitamin B12 dependent methionine synthase, activation domain BJD12_RS21140 PF00809 Pterin binding enzyme BJD12_RS21140 PF02574 Homocysteine S-methyltransferase BJD12_RS21145 PF01209 ubiE/COQ5 methyltransferase family BJD12_RS21150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BJD12_RS21150 PF02770 Acyl-CoA dehydrogenase, middle domain BJD12_RS21150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BJD12_RS21165 PF17876 Cold shock domain BJD12_RS21165 PF08206 Ribonuclease B OB domain BJD12_RS21165 PF00575 S1 RNA binding domain BJD12_RS21165 PF00773 RNB domain BJD12_RS21165 PF08461 Ribonuclease R winged-helix domain BJD12_RS21175 PF00588 SpoU rRNA Methylase family BJD12_RS21175 PF08032 RNA 2'-O ribose methyltransferase substrate binding BJD12_RS21180 PF00990 Diguanylate cyclase, GGDEF domain BJD12_RS21185 PF00929 Exonuclease BJD12_RS21195 PF01527 Transposase BJD12_RS21205 PF01895 PhoU domain BJD12_RS21210 PF00005 ABC transporter BJD12_RS21215 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS21220 PF00528 Binding-protein-dependent transport system inner membrane component BJD12_RS21225 PF12849 PBP superfamily domain BJD12_RS21245 PF00484 Carbonic anhydrase BJD12_RS21250 PF00916 Sulfate permease family BJD12_RS21250 PF01740 STAS domain BJD12_RS21255 PF10576 Iron-sulfur binding domain of endonuclease III BJD12_RS21255 PF00633 Helix-hairpin-helix motif BJD12_RS21255 PF00730 HhH-GPD superfamily base excision DNA repair protein BJD12_RS21265 PF00378 Enoyl-CoA hydratase/isomerase BJD12_RS21270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BJD12_RS21270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BJD12_RS21275 PF00293 NUDIX domain BJD12_RS21280 PF00581 Rhodanese-like domain BJD12_RS21320 PF16326 ABC transporter C-terminal domain BJD12_RS21320 PF00005 ABC transporter BJD12_RS21325 PF10672 S-adenosylmethionine-dependent methyltransferase BJD12_RS21325 PF01170 Putative RNA methylase family UPF0020 BJD12_RS21325 PF02926 THUMP domain BJD12_RS21335 PF01513 ATP-NAD kinase BJD12_RS21360 PF00929 Exonuclease BJD12_RS21360 PF08411 Exonuclease C-terminal BJD12_RS21365 PF01494 FAD binding domain BJD12_RS21370 PF00266 Aminotransferase class-V BJD12_RS21380 PF06052 3-hydroxyanthranilic acid dioxygenase BJD12_RS21385 PF00484 Carbonic anhydrase BJD12_RS21410 PF01336 OB-fold nucleic acid binding domain BJD12_RS21410 PF00152 tRNA synthetases class II (D, K and N) BJD12_RS21415 PF01521 Iron-sulphur cluster biosynthesis BJD12_RS21420 PF01250 Ribosomal protein S6 BJD12_RS21425 PF01084 Ribosomal protein S18 BJD12_RS21430 PF03948 Ribosomal protein L9, C-terminal domain BJD12_RS21430 PF01281 Ribosomal protein L9, N-terminal domain BJD12_RS21435 PF02463 RecF/RecN/SMC N terminal domain BJD12_RS21440 PF04354 ZipA, C-terminal FtsZ-binding domain BJD12_RS21450 PF00155 Aminotransferase class I and II BJD12_RS21455 PF12826 Helix-hairpin-helix motif BJD12_RS21455 PF01653 NAD-dependent DNA ligase adenylation domain BJD12_RS21455 PF03120 NAD-dependent DNA ligase OB-fold domain BJD12_RS21455 PF00533 BRCA1 C Terminus (BRCT) domain BJD12_RS21455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BJD12_RS21460 PF00152 tRNA synthetases class II (D, K and N) BJD12_RS21490 PF01008 Initiation factor 2 subunit family BJD12_RS21495 PF00521 DNA gyrase/topoisomerase IV, subunit A BJD12_RS21495 PF03989 DNA gyrase C-terminal domain, beta-propeller BJD12_RS21500 PF13360 PQQ-like domain BJD12_RS21515 PF17392 Urocanase C-terminal domain BJD12_RS21515 PF01175 Urocanase Rossmann-like domain BJD12_RS21515 PF17391 Urocanase N-terminal domain BJD12_RS21525 PF00221 Aromatic amino acid lyase BJD12_RS21530 PF07969 Amidohydrolase family BJD12_RS21570 PF01794 Ferric reductase like transmembrane component BJD12_RS21575 PF00174 Oxidoreductase molybdopterin binding domain BJD12_RS21580 PF00266 Aminotransferase class-V BJD12_RS21585 PF01842 ACT domain BJD12_RS21585 PF01817 Chorismate mutase type II BJD12_RS21585 PF00800 Prephenate dehydratase BJD12_RS21590 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BJD12_RS21600 PF03544 Gram-negative bacterial TonB protein C-terminal BJD12_RS21605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BJD12_RS21605 PF02403 Seryl-tRNA synthetase N-terminal domain BJD12_RS21610 PF02525 Flavodoxin-like fold BJD12_RS21615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS21615 PF03466 LysR substrate binding domain BJD12_RS21690 PF04002 RadC-like JAB domain BJD12_RS21780 PF02203 Tar ligand binding domain homologue BJD12_RS21780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS21780 PF00672 HAMP domain BJD12_RS21785 PF13188 PAS domain BJD12_RS21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS21785 PF00512 His Kinase A (phospho-acceptor) domain BJD12_RS21785 PF08448 PAS fold BJD12_RS21785 PF00072 Response regulator receiver domain BJD12_RS21790 PF02954 Bacterial regulatory protein, Fis family BJD12_RS21790 PF00158 Sigma-54 interaction domain BJD12_RS21790 PF00072 Response regulator receiver domain BJD12_RS21795 PF06745 KaiC BJD12_RS21800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS21800 PF13426 PAS domain BJD12_RS21800 PF00072 Response regulator receiver domain BJD12_RS21810 PF03918 Cytochrome C biogenesis protein BJD12_RS21815 PF08534 Redoxin BJD12_RS21820 PF01578 Cytochrome C assembly protein BJD12_RS21820 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BJD12_RS21825 PF03100 CcmE BJD12_RS21830 PF04995 Heme exporter protein D (CcmD) BJD12_RS21835 PF01578 Cytochrome C assembly protein BJD12_RS21840 PF00082 Subtilase family BJD12_RS21850 PF04542 Sigma-70 region 2 BJD12_RS21850 PF08281 Sigma-70, region 4 BJD12_RS21860 PF00034 Cytochrome c BJD12_RS21880 PF05523 WxcM-like, C-terminal BJD12_RS21885 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BJD12_RS21890 PF01943 Polysaccharide biosynthesis protein BJD12_RS21895 PF00535 Glycosyl transferase family 2 BJD12_RS21920 PF01979 Amidohydrolase family BJD12_RS21920 PF13382 Adenine deaminase C-terminal domain BJD12_RS21925 PF13649 Methyltransferase domain BJD12_RS21935 PF13579 Glycosyl transferase 4-like domain BJD12_RS21935 PF00534 Glycosyl transferases group 1 BJD12_RS21950 PF00005 ABC transporter BJD12_RS21955 PF00005 ABC transporter BJD12_RS21955 PF00664 ABC transporter transmembrane region BJD12_RS21960 PF07690 Major Facilitator Superfamily BJD12_RS21965 PF00296 Luciferase-like monooxygenase BJD12_RS21980 PF03471 Transporter associated domain BJD12_RS21980 PF00571 CBS domain BJD12_RS21980 PF01595 Cyclin M transmembrane N-terminal domain BJD12_RS21995 PF01384 Phosphate transporter family BJD12_RS22000 PF02698 DUF218 domain BJD12_RS22010 PF02611 CDP-diacylglycerol pyrophosphatase BJD12_RS22015 PF00986 DNA gyrase B subunit, carboxyl terminus BJD12_RS22015 PF00204 DNA gyrase B BJD12_RS22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BJD12_RS22015 PF01751 Toprim domain BJD12_RS22025 PF06418 CTP synthase N-terminus BJD12_RS22025 PF00117 Glutamine amidotransferase class-I BJD12_RS22030 PF00793 DAHP synthetase I family BJD12_RS22040 PF00113 Enolase, C-terminal TIM barrel domain BJD12_RS22040 PF03952 Enolase, N-terminal domain BJD12_RS22045 PF04977 Septum formation initiator BJD12_RS22050 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BJD12_RS22055 PF02542 YgbB family BJD12_RS22060 PF01142 tRNA pseudouridine synthase D (TruD) BJD12_RS22065 PF01713 Smr domain BJD12_RS22070 PF01975 Survival protein SurE BJD12_RS22080 PF09335 SNARE associated Golgi protein BJD12_RS22085 PF01476 LysM domain BJD12_RS22085 PF01551 Peptidase family M23 BJD12_RS22090 PF04430 Protein of unknown function (DUF498/DUF598) BJD12_RS22095 PF01985 CRS1 / YhbY (CRM) domain BJD12_RS22100 PF01728 FtsJ-like methyltransferase BJD12_RS22105 PF00004 ATPase family associated with various cellular activities (AAA) BJD12_RS22105 PF01434 Peptidase family M41 BJD12_RS22105 PF17862 AAA+ lid domain BJD12_RS22105 PF06480 FtsH Extracellular BJD12_RS22110 PF00809 Pterin binding enzyme BJD12_RS22120 PF17209 Hfq protein BJD12_RS22125 PF01926 50S ribosome-binding GTPase BJD12_RS22125 PF13167 GTP-binding GTPase N-terminal BJD12_RS22125 PF16360 GTP-binding GTPase Middle Region BJD12_RS22130 PF02464 Competence-damaged protein BJD12_RS22135 PF00593 TonB dependent receptor BJD12_RS22135 PF07715 TonB-dependent Receptor Plug Domain BJD12_RS22140 PF03109 ABC1 family BJD12_RS22145 PF00717 Peptidase S24-like BJD12_RS22145 PF01726 LexA DNA binding domain BJD12_RS22150 PF00154 recA bacterial DNA recombination protein BJD12_RS22155 PF02631 RecX family BJD12_RS22160 PF02272 DHHA1 domain BJD12_RS22160 PF01411 tRNA synthetases class II (A) BJD12_RS22160 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BJD12_RS22165 PF02599 Global regulator protein family BJD12_RS22175 PF13426 PAS domain BJD12_RS22175 PF08447 PAS fold BJD12_RS22175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BJD12_RS22180 PF02678 Pirin BJD12_RS22180 PF17954 Quercetinase C-terminal cupin domain BJD12_RS22185 PF03466 LysR substrate binding domain BJD12_RS22185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS22210 PF02581 Thiamine monophosphate synthase BJD12_RS22210 PF08543 Phosphomethylpyrimidine kinase BJD12_RS22225 PF13638 PIN domain BJD12_RS22225 PF02562 PhoH-like protein BJD12_RS22230 PF00578 AhpC/TSA family BJD12_RS22245 PF00701 Dihydrodipicolinate synthetase family BJD12_RS22255 PF11953 Domain of unknown function (DUF3470) BJD12_RS22255 PF00037 4Fe-4S binding domain BJD12_RS22260 PF05035 2-keto-3-deoxy-galactonokinase BJD12_RS22265 PF08450 SMP-30/Gluconolactonase/LRE-like region BJD12_RS22270 PF13378 Enolase C-terminal domain-like BJD12_RS22270 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BJD12_RS22275 PF01081 KDPG and KHG aldolase BJD12_RS22285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BJD12_RS22285 PF03466 LysR substrate binding domain BJD12_RS22300 PF03442 Carbohydrate binding domain X2 BJD12_RS22300 PF00942 Cellulose binding domain BJD12_RS22315 PF01055 Glycosyl hydrolases family 31 BJD12_RS22315 PF17137 Domain of unknown function (DUF5110) BJD12_RS22315 PF16338 Domain of unknown function (DUF4968) BJD12_RS22325 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BJD12_RS22325 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BJD12_RS22335 PF00083 Sugar (and other) transporter BJD12_RS22355 PF01520 N-acetylmuramoyl-L-alanine amidase BJD12_RS22360 PF02649 Type I GTP cyclohydrolase folE2 BJD12_RS22370 PF01743 Poly A polymerase head domain BJD12_RS22370 PF12626 Polymerase A arginine-rich C-terminus BJD12_RS22370 PF12627 Probable RNA and SrmB- binding site of polymerase A BJD12_RS22375 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BJD12_RS22470 PF13614 AAA domain BJD12_RS22630 PF13307 Helicase C-terminal domain BJD12_RS22630 PF06733 DEAD_2 BJD12_RS22640 PF01966 HD domain BJD12_RS22650 PF00486 Transcriptional regulatory protein, C terminal BJD12_RS22650 PF00072 Response regulator receiver domain BJD12_RS22670 PF10411 Disulfide bond isomerase protein N-terminus BJD12_RS22670 PF13098 Thioredoxin-like domain BJD12_RS22695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BJD12_RS22695 PF10135 Rod binding protein BJD12_RS22725 PF04381 Putative exonuclease, RdgC BJD12_RS22730 PF00565 Staphylococcal nuclease homologue BJD12_RS22785 PF02195 ParB-like nuclease domain BJD12_RS22785 PF17762 HTH domain found in ParB protein BJD12_RS22820 PF00436 Single-strand binding protein family BJD12_RS22850 PF04851 Type III restriction enzyme, res subunit BJD12_RS22850 PF00271 Helicase conserved C-terminal domain BJD12_RS22880 PF13361 UvrD-like helicase C-terminal domain BJD12_RS22880 PF00580 UvrD/REP helicase N-terminal domain BJD12_RS22950 PF11412 Disulphide bond corrector protein DsbC BJD12_RS22950 PF02683 Cytochrome C biogenesis protein transmembrane region BJD12_RS22955 PF13361 UvrD-like helicase C-terminal domain BJD12_RS22955 PF00580 UvrD/REP helicase N-terminal domain BJD12_RS22995 PF01526 Tn3 transposase DDE domain BJD12_RS22995 PF13700 Domain of unknown function (DUF4158) BJD12_RS23005 PF00376 MerR family regulatory protein BJD12_RS23005 PF09278 MerR, DNA binding BJD12_RS23025 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS23025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS23040 PF02040 Arsenical pump membrane protein BJD12_RS23045 PF03358 NADPH-dependent FMN reductase BJD12_RS23050 PF03960 ArsC family BJD12_RS23055 PF01451 Low molecular weight phosphotyrosine protein phosphatase BJD12_RS23070 PF13175 AAA ATPase domain BJD12_RS23095 PF00394 Multicopper oxidase BJD12_RS23095 PF07731 Multicopper oxidase BJD12_RS23095 PF07732 Multicopper oxidase BJD12_RS23100 PF05275 Copper resistance protein B precursor (CopB) BJD12_RS23130 PF05425 Copper resistance protein D BJD12_RS23135 PF04945 YHS domain BJD12_RS23150 PF00491 Arginase family BJD12_RS23165 PF00873 AcrB/AcrD/AcrF family BJD12_RS23170 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BJD12_RS23170 PF00529 HlyD membrane-fusion protein of T1SS BJD12_RS23295 PF06834 TraU protein BJD12_RS23335 PF09722 Protein of unknown function (DUF2384) BJD12_RS23335 PF01936 NYN domain BJD12_RS23375 PF13683 Integrase core domain BJD12_RS23375 PF13276 HTH-like domain BJD12_RS23380 PF01527 Transposase BJD12_RS23400 PF01131 DNA topoisomerase BJD12_RS23400 PF01751 Toprim domain BJD12_RS23420 PF03743 Bacterial conjugation TrbI-like protein BJD12_RS23435 PF04610 TrbL/VirB6 plasmid conjugal transfer protein BJD12_RS23445 PF03135 CagE, TrbE, VirB family, component of type IV transporter system BJD12_RS23460 PF00437 Type II/IV secretion system protein BJD12_RS23485 PF07519 Tannase and feruloyl esterase BJD12_RS23505 PF02534 Type IV secretory system Conjugative DNA transfer BJD12_RS23595 PF03421 YopJ Serine/Threonine acetyltransferase