BJD12_RS00010	PWY-5155	β-alanine biosynthesis III
BJD12_RS00015	PWY-3801	sucrose degradation II (sucrose synthase)
BJD12_RS00015	PWY-5054	sorbitol biosynthesis I
BJD12_RS00015	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
BJD12_RS00015	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD12_RS00015	PWY-5659	GDP-mannose biosynthesis
BJD12_RS00015	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS00015	PWY-621	sucrose degradation III (sucrose invertase)
BJD12_RS00015	PWY-622	starch biosynthesis
BJD12_RS00015	PWY-6981	chitin biosynthesis
BJD12_RS00015	PWY-6992	1,5-anhydrofructose degradation
BJD12_RS00015	PWY-7238	sucrose biosynthesis II
BJD12_RS00015	PWY-7347	sucrose biosynthesis III
BJD12_RS00015	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD12_RS00085	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS00085	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS00095	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS00095	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS00100	PWY-5686	UMP biosynthesis
BJD12_RS00525	PWY-2941	L-lysine biosynthesis II
BJD12_RS00525	PWY-2942	L-lysine biosynthesis III
BJD12_RS00525	PWY-5097	L-lysine biosynthesis VI
BJD12_RS00525	PWY-6559	spermidine biosynthesis II
BJD12_RS00525	PWY-6562	norspermidine biosynthesis
BJD12_RS00525	PWY-7153	grixazone biosynthesis
BJD12_RS00530	PWY-702	L-methionine biosynthesis II
BJD12_RS00625	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BJD12_RS00625	PWY-5389	3-methylthiopropanoate biosynthesis
BJD12_RS00630	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BJD12_RS00630	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS00630	PWY-6416	quinate degradation II
BJD12_RS00630	PWY-6707	gallate biosynthesis
BJD12_RS00735	PWY-2941	L-lysine biosynthesis II
BJD12_RS00735	PWY-2942	L-lysine biosynthesis III
BJD12_RS00735	PWY-5097	L-lysine biosynthesis VI
BJD12_RS00740	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS00740	PWY-5686	UMP biosynthesis
BJD12_RS00740	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS00750	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS00750	PWY-5686	UMP biosynthesis
BJD12_RS00750	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS00840	PWY-5747	2-methylcitrate cycle II
BJD12_RS01160	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS01235	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS01495	PWY-1361	benzoyl-CoA degradation I (aerobic)
BJD12_RS01495	PWY-5109	2-methylbutanoate biosynthesis
BJD12_RS01495	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BJD12_RS01495	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BJD12_RS01495	PWY-5177	glutaryl-CoA degradation
BJD12_RS01495	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS01495	PWY-6435	4-hydroxybenzoate biosynthesis V
BJD12_RS01495	PWY-6583	pyruvate fermentation to butanol I
BJD12_RS01495	PWY-6863	pyruvate fermentation to hexanol
BJD12_RS01495	PWY-6883	pyruvate fermentation to butanol II
BJD12_RS01495	PWY-6944	androstenedione degradation
BJD12_RS01495	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD12_RS01495	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD12_RS01495	PWY-7007	methyl ketone biosynthesis
BJD12_RS01495	PWY-7046	4-coumarate degradation (anaerobic)
BJD12_RS01495	PWY-7094	fatty acid salvage
BJD12_RS01495	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD12_RS01495	PWY-735	jasmonic acid biosynthesis
BJD12_RS01495	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BJD12_RS01495	PWY-7606	docosahexaenoate biosynthesis III (mammals)
BJD12_RS01495	PWY-7726	BJD12_RS01495
BJD12_RS01505	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD12_RS01505	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BJD12_RS01505	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS01505	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS01505	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BJD12_RS01505	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD12_RS01505	PWY-7205	CMP phosphorylation
BJD12_RS01505	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD12_RS01505	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS01505	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS01505	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS01505	PWY-7224	purine deoxyribonucleosides salvage
BJD12_RS01505	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS01505	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BJD12_RS01510	PWY-2201	folate transformations I
BJD12_RS01540	PWY-6823	molybdenum cofactor biosynthesis
BJD12_RS01570	PWY-6823	molybdenum cofactor biosynthesis
BJD12_RS01585	PWY-5194	siroheme biosynthesis
BJD12_RS01585	PWY-5441	S-methyl-L-methionine cycle
BJD12_RS01585	PWY-702	L-methionine biosynthesis II
BJD12_RS01585	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BJD12_RS01610	PWY-6683	sulfate reduction III (assimilatory)
BJD12_RS01625	PWY-5194	siroheme biosynthesis
BJD12_RS01625	PWY-5441	S-methyl-L-methionine cycle
BJD12_RS01625	PWY-702	L-methionine biosynthesis II
BJD12_RS01625	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BJD12_RS02030	PWY-7158	L-phenylalanine degradation V
BJD12_RS02110	PWY-5269	cardiolipin biosynthesis II
BJD12_RS02110	PWY-5668	cardiolipin biosynthesis I
BJD12_RS02130	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD12_RS02190	PWY-3781	aerobic respiration I (cytochrome c)
BJD12_RS02190	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BJD12_RS02190	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD12_RS02190	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS02190	PWY-6728	methylaspartate cycle
BJD12_RS02190	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS02190	PWY-7254	TCA cycle VII (acetate-producers)
BJD12_RS02190	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD12_RS02200	PWY-3781	aerobic respiration I (cytochrome c)
BJD12_RS02200	PWY-4302	aerobic respiration III (alternative oxidase pathway)
BJD12_RS02200	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD12_RS02200	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS02200	PWY-6728	methylaspartate cycle
BJD12_RS02200	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS02200	PWY-7254	TCA cycle VII (acetate-producers)
BJD12_RS02200	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD12_RS02230	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD12_RS02235	PWY-2722	trehalose degradation IV
BJD12_RS02235	PWY-2723	trehalose degradation V
BJD12_RS02235	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD12_RS02235	PWY-5661	GDP-glucose biosynthesis
BJD12_RS02235	PWY-621	sucrose degradation III (sucrose invertase)
BJD12_RS02235	PWY-7238	sucrose biosynthesis II
BJD12_RS02235	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD12_RS02240	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD12_RS02240	PWY-6855	chitin degradation I (archaea)
BJD12_RS02240	PWY-6906	chitin derivatives degradation
BJD12_RS02245	PWY-5101	L-isoleucine biosynthesis II
BJD12_RS02245	PWY-5103	L-isoleucine biosynthesis III
BJD12_RS02245	PWY-5104	L-isoleucine biosynthesis IV
BJD12_RS02245	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD12_RS02250	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS02250	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD12_RS02250	PWY-7242	D-fructuronate degradation
BJD12_RS02250	PWY-7310	D-glucosaminate degradation
BJD12_RS02250	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
BJD12_RS02365	PWY-6502	oxidized GTP and dGTP detoxification
BJD12_RS02380	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS02465	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS02470	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BJD12_RS02470	PWY-6596	adenosine nucleotides degradation I
BJD12_RS02470	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS02475	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
BJD12_RS02475	PWY-2201	folate transformations I
BJD12_RS02475	PWY-3841	folate transformations II
BJD12_RS02475	PWY-5030	L-histidine degradation III
BJD12_RS02475	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD12_RS02475	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BJD12_RS02490	PWY-3801	sucrose degradation II (sucrose synthase)
BJD12_RS02490	PWY-6527	stachyose degradation
BJD12_RS02490	PWY-7238	sucrose biosynthesis II
BJD12_RS02490	PWY-7343	UDP-glucose biosynthesis
BJD12_RS02500	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS02500	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD12_RS02500	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS02500	PWY-6938	NADH repair
BJD12_RS02525	PWY-7205	CMP phosphorylation
BJD12_RS02540	PWY-43	putrescine biosynthesis II
BJD12_RS02715	PWY-5344	L-homocysteine biosynthesis
BJD12_RS02745	PWY-7545	pyruvate to cytochrome <i>bd</i> terminal oxidase electron transfer
BJD12_RS02765	PWY-3341	L-proline biosynthesis III
BJD12_RS02765	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD12_RS02770	PWY-3341	L-proline biosynthesis III
BJD12_RS02770	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD12_RS02785	PWY-4983	L-citrulline-nitric oxide cycle
BJD12_RS02785	PWY-4984	urea cycle
BJD12_RS02785	PWY-5	canavanine biosynthesis
BJD12_RS02785	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS02785	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS02790	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS02790	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS02800	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS02800	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS02815	PWY-4983	L-citrulline-nitric oxide cycle
BJD12_RS02815	PWY-4984	urea cycle
BJD12_RS02815	PWY-5	canavanine biosynthesis
BJD12_RS02815	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS02815	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS02825	PWY-5686	UMP biosynthesis
BJD12_RS02860	PWY-5686	UMP biosynthesis
BJD12_RS02900	PWY-1081	homogalacturonan degradation
BJD12_RS02900	PWY-7246	pectin degradation II
BJD12_RS02900	PWY-7248	pectin degradation III
BJD12_RS02915	PWY-181	photorespiration
BJD12_RS02920	PWY-5855	ubiquinol-7 biosynthesis (prokaryotic)
BJD12_RS02920	PWY-5856	ubiquinol-9 biosynthesis (prokaryotic)
BJD12_RS02920	PWY-5857	ubiquinol-10 biosynthesis (prokaryotic)
BJD12_RS02920	PWY-5870	ubiquinol-8 biosynthesis (eukaryotic)
BJD12_RS02920	PWY-5871	ubiquinol-9 biosynthesis (eukaryotic)
BJD12_RS02920	PWY-5872	ubiquinol-10 biosynthesis (eukaryotic)
BJD12_RS02920	PWY-5873	ubiquinol-7 biosynthesis (eukaryotic)
BJD12_RS02920	PWY-6708	ubiquinol-8 biosynthesis (prokaryotic)
BJD12_RS02920	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
BJD12_RS02920	PWY-7233	ubiquinol-6 bypass biosynthesis (eukaryotic)
BJD12_RS02955	PWY-6004	glycine betaine biosynthesis V (from glycine)
BJD12_RS02960	PWY-2301	<i>myo</i>-inositol biosynthesis
BJD12_RS02960	PWY-4702	phytate degradation I
BJD12_RS02960	PWY-6363	D-<i>myo</i>-inositol (1,4,5)-trisphosphate degradation
BJD12_RS02965	PWY-6854	ethylene biosynthesis III (microbes)
BJD12_RS03000	PWY-6605	adenine and adenosine salvage II
BJD12_RS03000	PWY-6610	adenine and adenosine salvage IV
BJD12_RS03055	PWY-5676	acetyl-CoA fermentation to butanoate II
BJD12_RS03055	PWY-5741	ethylmalonyl-CoA pathway
BJD12_RS03055	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD12_RS03090	PWY-6938	NADH repair
BJD12_RS03095	PWY-6700	queuosine biosynthesis
BJD12_RS03230	PWY-3781	aerobic respiration I (cytochrome c)
BJD12_RS03230	PWY-6692	Fe(II) oxidation
BJD12_RS03230	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
BJD12_RS03230	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD12_RS03345	PWY-381	nitrate reduction II (assimilatory)
BJD12_RS03345	PWY-5675	nitrate reduction V (assimilatory)
BJD12_RS03345	PWY-6549	L-glutamine biosynthesis III
BJD12_RS03345	PWY-6963	ammonia assimilation cycle I
BJD12_RS03345	PWY-6964	ammonia assimilation cycle II
BJD12_RS03355	PWY-381	nitrate reduction II (assimilatory)
BJD12_RS03355	PWY-5675	nitrate reduction V (assimilatory)
BJD12_RS03355	PWY-6549	L-glutamine biosynthesis III
BJD12_RS03355	PWY-6963	ammonia assimilation cycle I
BJD12_RS03355	PWY-6964	ammonia assimilation cycle II
BJD12_RS03450	PWY-5022	4-aminobutanoate degradation V
BJD12_RS03450	PWY-6728	methylaspartate cycle
BJD12_RS03450	PWY-7126	ethylene biosynthesis IV
BJD12_RS03585	PWY-6700	queuosine biosynthesis
BJD12_RS03590	PWY-6700	queuosine biosynthesis
BJD12_RS03615	PWY-4702	phytate degradation I
BJD12_RS03625	PWY-7183	pyrimidine nucleobases salvage I
BJD12_RS03630	PWY-6788	cellulose degradation II (fungi)
BJD12_RS03660	PWY-6825	phosphatidylcholine biosynthesis V
BJD12_RS03705	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS03850	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD12_RS03850	PWY-6892	thiazole biosynthesis I (E. coli)
BJD12_RS03850	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS03855	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS03855	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD12_RS03855	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD12_RS03855	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS03865	PWY-5129	sphingolipid biosynthesis (plants)
BJD12_RS03880	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS03900	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD12_RS03900	PWY-622	starch biosynthesis
BJD12_RS03945	PWY-6655	xanthan biosynthesis
BJD12_RS03945	PWY-6658	acetan biosynthesis
BJD12_RS04230	PWY-6854	ethylene biosynthesis III (microbes)
BJD12_RS04240	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD12_RS04240	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD12_RS04250	PWY-5316	nicotine biosynthesis
BJD12_RS04250	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS04250	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BJD12_RS04250	PWY-7342	superpathway of nicotine biosynthesis
BJD12_RS04380	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS04380	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS04380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS04380	PWY-7003	glycerol degradation to butanol
BJD12_RS04420	PWY-6749	CMP-legionaminate biosynthesis I
BJD12_RS04425	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS04425	PWY-5743	3-hydroxypropanoate cycle
BJD12_RS04425	PWY-5744	glyoxylate assimilation
BJD12_RS04425	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS04425	PWY-6679	jadomycin biosynthesis
BJD12_RS04425	PWY-6722	candicidin biosynthesis
BJD12_RS04425	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS04470	PWY-2941	L-lysine biosynthesis II
BJD12_RS04470	PWY-2942	L-lysine biosynthesis III
BJD12_RS04470	PWY-5097	L-lysine biosynthesis VI
BJD12_RS04470	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
BJD12_RS04470	PWY-6559	spermidine biosynthesis II
BJD12_RS04470	PWY-6562	norspermidine biosynthesis
BJD12_RS04470	PWY-7153	grixazone biosynthesis
BJD12_RS04470	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
BJD12_RS04480	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS04500	PWY-5669	phosphatidylethanolamine biosynthesis I
BJD12_RS04585	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS04720	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BJD12_RS04720	PWY-5491	diethylphosphate degradation
BJD12_RS04805	PWY-6825	phosphatidylcholine biosynthesis V
BJD12_RS04820	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS04820	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
BJD12_RS04900	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS05160	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS05285	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS05285	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS05415	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS05415	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS05430	PWY-2941	L-lysine biosynthesis II
BJD12_RS05430	PWY-2942	L-lysine biosynthesis III
BJD12_RS05430	PWY-5097	L-lysine biosynthesis VI
BJD12_RS05430	PWY-6559	spermidine biosynthesis II
BJD12_RS05430	PWY-6562	norspermidine biosynthesis
BJD12_RS05430	PWY-7153	grixazone biosynthesis
BJD12_RS05455	PWY-5686	UMP biosynthesis
BJD12_RS05505	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD12_RS05510	PWY-3341	L-proline biosynthesis III
BJD12_RS05510	PWY-4981	L-proline biosynthesis II (from arginine)
BJD12_RS05510	PWY-6344	L-ornithine degradation II (Stickland reaction)
BJD12_RS05570	PWY-6823	molybdenum cofactor biosynthesis
BJD12_RS05570	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD12_RS05570	PWY-6892	thiazole biosynthesis I (E. coli)
BJD12_RS05570	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
BJD12_RS05675	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD12_RS05675	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD12_RS05675	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD12_RS05690	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD12_RS05690	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
BJD12_RS05720	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS05720	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS05735	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD12_RS05735	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
BJD12_RS05950	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BJD12_RS05950	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BJD12_RS05955	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS05960	PWY-6164	3-dehydroquinate biosynthesis I
BJD12_RS05970	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BJD12_RS05970	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BJD12_RS06045	PWY-5344	L-homocysteine biosynthesis
BJD12_RS06190	PWY-2201	folate transformations I
BJD12_RS06195	PWY-2722	trehalose degradation IV
BJD12_RS06195	PWY-2723	trehalose degradation V
BJD12_RS06195	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD12_RS06195	PWY-5661	GDP-glucose biosynthesis
BJD12_RS06195	PWY-621	sucrose degradation III (sucrose invertase)
BJD12_RS06195	PWY-7238	sucrose biosynthesis II
BJD12_RS06195	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD12_RS06225	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS06245	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS06360	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
BJD12_RS06360	PWY-5368	dimorphecolate biosynthesis
BJD12_RS06360	PWY-5995	linoleate biosynthesis I (plants)
BJD12_RS06360	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
BJD12_RS06360	PWY-6803	phosphatidylcholine acyl editing
BJD12_RS06360	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
BJD12_RS06360	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
BJD12_RS06360	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
BJD12_RS06360	PWY-7470	phosphatidylcholine biosynthesis VII
BJD12_RS06360	PWY-7618	ricinoleate biosynthesis
BJD12_RS06375	PWY-1001	cellulose biosynthesis
BJD12_RS06375	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS06375	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD12_RS06375	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD12_RS06375	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS06405	PWY-6420	pyrroloquinoline quinone biosynthesis
BJD12_RS06430	PWY-2722	trehalose degradation IV
BJD12_RS06430	PWY-2723	trehalose degradation V
BJD12_RS06430	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD12_RS06430	PWY-5661	GDP-glucose biosynthesis
BJD12_RS06430	PWY-621	sucrose degradation III (sucrose invertase)
BJD12_RS06430	PWY-7238	sucrose biosynthesis II
BJD12_RS06430	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD12_RS06505	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD12_RS06510	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD12_RS06760	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BJD12_RS06760	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD12_RS06760	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD12_RS06770	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BJD12_RS06770	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD12_RS06770	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD12_RS06775	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BJD12_RS06775	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD12_RS06775	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD12_RS06785	PWY-5443	aminopropanol phosphate biosynthesis I
BJD12_RS06795	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BJD12_RS06795	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD12_RS06795	PWY-6268	adenosylcobalamin salvage from cobalamin
BJD12_RS06795	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD12_RS06815	PWY-5344	L-homocysteine biosynthesis
BJD12_RS06815	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BJD12_RS06935	PWY-5392	reductive TCA cycle II
BJD12_RS06935	PWY-5537	pyruvate fermentation to acetate V
BJD12_RS06935	PWY-5538	pyruvate fermentation to acetate VI
BJD12_RS06935	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS06935	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS06935	PWY-6728	methylaspartate cycle
BJD12_RS06935	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS06935	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD12_RS07190	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD12_RS07190	PWY-6892	thiazole biosynthesis I (E. coli)
BJD12_RS07250	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS07295	PWY-5278	sulfite oxidation III
BJD12_RS07295	PWY-5340	sulfate activation for sulfonation
BJD12_RS07295	PWY-6683	sulfate reduction III (assimilatory)
BJD12_RS07295	PWY-6932	selenate reduction
BJD12_RS07300	PWY-5278	sulfite oxidation III
BJD12_RS07300	PWY-5340	sulfate activation for sulfonation
BJD12_RS07300	PWY-6683	sulfate reduction III (assimilatory)
BJD12_RS07300	PWY-6932	selenate reduction
BJD12_RS07305	PWY-6683	sulfate reduction III (assimilatory)
BJD12_RS07310	PWY-6683	sulfate reduction III (assimilatory)
BJD12_RS07350	PWY-5194	siroheme biosynthesis
BJD12_RS07350	PWY-5441	S-methyl-L-methionine cycle
BJD12_RS07350	PWY-702	L-methionine biosynthesis II
BJD12_RS07350	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
BJD12_RS07355	PWY-6936	seleno-amino acid biosynthesis
BJD12_RS07360	PWY-6825	phosphatidylcholine biosynthesis V
BJD12_RS07370	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS07370	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD12_RS07370	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS07370	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS07370	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD12_RS07380	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS07380	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS07380	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS07380	PWY-5723	Rubisco shunt
BJD12_RS07380	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS07380	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS07380	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS07380	PWY-7003	glycerol degradation to butanol
BJD12_RS07380	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS07380	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD12_RS07390	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS07390	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS07390	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS07390	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS07390	PWY-7003	glycerol degradation to butanol
BJD12_RS07410	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS07410	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS07410	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS07410	PWY-7003	glycerol degradation to butanol
BJD12_RS07415	PWY-2582	brassinosteroid biosynthesis II
BJD12_RS07415	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD12_RS07415	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD12_RS07415	PWY-6948	sitosterol degradation to androstenedione
BJD12_RS07415	PWY-699	brassinosteroid biosynthesis I
BJD12_RS07415	PWY-7299	progesterone biosynthesis
BJD12_RS07520	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD12_RS07520	PWY-5723	Rubisco shunt
BJD12_RS07520	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD12_RS07520	PWY-6892	thiazole biosynthesis I (E. coli)
BJD12_RS07520	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS07520	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS07630	PWY-6497	D-galactarate degradation II
BJD12_RS07640	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS07640	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS07640	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS07640	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS07640	PWY-5723	Rubisco shunt
BJD12_RS07640	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS07640	PWY-6499	D-glucarate degradation II
BJD12_RS07640	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS07640	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS07640	PWY-7003	glycerol degradation to butanol
BJD12_RS07640	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS07640	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS07655	PWY-6486	D-galacturonate degradation II
BJD12_RS07655	PWY-6497	D-galactarate degradation II
BJD12_RS07655	PWY-6499	D-glucarate degradation II
BJD12_RS07655	PWY-6501	D-glucuronate degradation II
BJD12_RS07725	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS07745	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BJD12_RS07815	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD12_RS07815	PWY-5723	Rubisco shunt
BJD12_RS07835	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BJD12_RS07835	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BJD12_RS07835	PWY-6897	thiamin salvage II
BJD12_RS07835	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BJD12_RS07835	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BJD12_RS07835	PWY-7356	thiamin salvage IV (yeast)
BJD12_RS07835	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BJD12_RS07890	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS08070	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS08175	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS08180	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS08180	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD12_RS08180	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS08180	PWY-7385	1,3-propanediol biosynthesis (engineered)
BJD12_RS08230	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
BJD12_RS08245	PWY-4041	&gamma;-glutamyl cycle
BJD12_RS08245	PWY-5826	hypoglycin biosynthesis
BJD12_RS08250	PWY-5103	L-isoleucine biosynthesis III
BJD12_RS08250	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD12_RS08255	PWY-5101	L-isoleucine biosynthesis II
BJD12_RS08255	PWY-5103	L-isoleucine biosynthesis III
BJD12_RS08255	PWY-5104	L-isoleucine biosynthesis IV
BJD12_RS08255	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
BJD12_RS08255	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
BJD12_RS08255	PWY-6389	(<i>S</i>)-acetoin biosynthesis
BJD12_RS08255	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD12_RS08270	PWY-6871	3-methylbutanol biosynthesis
BJD12_RS08280	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BJD12_RS08325	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
BJD12_RS08355	PWY-1281	sulfoacetaldehyde degradation I
BJD12_RS08355	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD12_RS08355	PWY-5482	pyruvate fermentation to acetate II
BJD12_RS08355	PWY-5485	pyruvate fermentation to acetate IV
BJD12_RS08355	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD12_RS08355	PWY-6637	sulfolactate degradation II
BJD12_RS08355	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD12_RS08430	PWY-5676	acetyl-CoA fermentation to butanoate II
BJD12_RS08430	PWY-5741	ethylmalonyl-CoA pathway
BJD12_RS08430	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD12_RS08540	PWY-6769	rhamnogalacturonan type I degradation I (fungi)
BJD12_RS08540	PWY-6771	rhamnogalacturonan type I degradation II (bacteria)
BJD12_RS08545	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BJD12_RS08560	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS08565	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS08570	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS08570	PWY-3162	L-tryptophan degradation V (side chain pathway)
BJD12_RS08570	PWY-5057	L-valine degradation II
BJD12_RS08570	PWY-5076	L-leucine degradation III
BJD12_RS08570	PWY-5078	L-isoleucine degradation II
BJD12_RS08570	PWY-5079	L-phenylalanine degradation III
BJD12_RS08570	PWY-5082	L-methionine degradation III
BJD12_RS08570	PWY-5480	pyruvate fermentation to ethanol I
BJD12_RS08570	PWY-5486	pyruvate fermentation to ethanol II
BJD12_RS08570	PWY-5751	phenylethanol biosynthesis
BJD12_RS08570	PWY-6313	serotonin degradation
BJD12_RS08570	PWY-6333	acetaldehyde biosynthesis I
BJD12_RS08570	PWY-6342	noradrenaline and adrenaline degradation
BJD12_RS08570	PWY-6454	vancomycin resistance I
BJD12_RS08570	PWY-6587	pyruvate fermentation to ethanol III
BJD12_RS08570	PWY-6802	salidroside biosynthesis
BJD12_RS08570	PWY-6871	3-methylbutanol biosynthesis
BJD12_RS08570	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS08570	PWY-7013	L-1,2-propanediol degradation
BJD12_RS08570	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD12_RS08570	PWY-7118	chitin degradation to ethanol
BJD12_RS08570	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BJD12_RS08610	PWY-6840	homoglutathione biosynthesis
BJD12_RS08610	PWY-7255	ergothioneine biosynthesis I (bacteria)
BJD12_RS08660	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BJD12_RS08660	PWY-7494	choline degradation IV
BJD12_RS08665	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
BJD12_RS08665	PWY-7494	choline degradation IV
BJD12_RS08715	PWY-5669	phosphatidylethanolamine biosynthesis I
BJD12_RS08795	PWY-6749	CMP-legionaminate biosynthesis I
BJD12_RS08800	PWY-5659	GDP-mannose biosynthesis
BJD12_RS08800	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
BJD12_RS08805	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
BJD12_RS08820	PWY-3221	dTDP-L-rhamnose biosynthesis II
BJD12_RS08820	PWY-6808	dTDP-D-forosamine biosynthesis
BJD12_RS08820	PWY-6942	dTDP-D-desosamine biosynthesis
BJD12_RS08820	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD12_RS08820	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BJD12_RS08820	PWY-6974	dTDP-L-olivose biosynthesis
BJD12_RS08820	PWY-6976	dTDP-L-mycarose biosynthesis
BJD12_RS08820	PWY-7104	dTDP-L-megosamine biosynthesis
BJD12_RS08820	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BJD12_RS08820	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BJD12_RS08820	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BJD12_RS08820	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BJD12_RS08820	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BJD12_RS08820	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BJD12_RS08820	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BJD12_RS08820	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BJD12_RS08820	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
BJD12_RS08820	PWY-7688	BJD12_RS08820
BJD12_RS08825	PWY-3221	dTDP-L-rhamnose biosynthesis II
BJD12_RS08825	PWY-6808	dTDP-D-forosamine biosynthesis
BJD12_RS08825	PWY-6942	dTDP-D-desosamine biosynthesis
BJD12_RS08825	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD12_RS08825	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
BJD12_RS08825	PWY-6974	dTDP-L-olivose biosynthesis
BJD12_RS08825	PWY-6976	dTDP-L-mycarose biosynthesis
BJD12_RS08825	PWY-7104	dTDP-L-megosamine biosynthesis
BJD12_RS08825	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
BJD12_RS08825	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
BJD12_RS08825	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
BJD12_RS08825	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
BJD12_RS08825	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
BJD12_RS08825	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
BJD12_RS08825	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
BJD12_RS08825	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
BJD12_RS08825	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
BJD12_RS08825	PWY-7688	BJD12_RS08825
BJD12_RS08850	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD12_RS08850	PWY-7688	BJD12_RS08850
BJD12_RS08870	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
BJD12_RS08870	PWY-5739	GDP-D-perosamine biosynthesis
BJD12_RS08870	PWY-5740	GDP-L-colitose biosynthesis
BJD12_RS08870	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
BJD12_RS08870	PWY-7573	GDP-mycosamine biosynthesis
BJD12_RS08970	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BJD12_RS08990	PWY-181	photorespiration
BJD12_RS09005	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD12_RS09005	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD12_RS09005	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD12_RS09005	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD12_RS09005	PWY-6113	superpathway of mycolate biosynthesis
BJD12_RS09005	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD12_RS09005	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS09005	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS09005	PWY-7663	gondoate biosynthesis (anaerobic)
BJD12_RS09005	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD12_RS09005	PWYG-321	mycolate biosynthesis
BJD12_RS09050	PWY-5386	methylglyoxal degradation I
BJD12_RS09075	PWY-6749	CMP-legionaminate biosynthesis I
BJD12_RS09120	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
BJD12_RS09120	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD12_RS09120	PWY-6453	stigma estolide biosynthesis
BJD12_RS09120	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BJD12_RS09120	PWY-7587	oleate biosynthesis III (cyanobacteria)
BJD12_RS09130	PWY-3461	L-tyrosine biosynthesis II
BJD12_RS09130	PWY-3462	L-phenylalanine biosynthesis II
BJD12_RS09130	PWY-6120	L-tyrosine biosynthesis III
BJD12_RS09130	PWY-6627	salinosporamide A biosynthesis
BJD12_RS09130	PWY-7626	bacilysin biosynthesis
BJD12_RS09140	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS09150	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS09185	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BJD12_RS09185	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD12_RS09320	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD12_RS09825	PWY-6168	flavin biosynthesis III (fungi)
BJD12_RS09825	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD12_RS10025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS10050	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS10050	PWY-6549	L-glutamine biosynthesis III
BJD12_RS10050	PWY-6728	methylaspartate cycle
BJD12_RS10050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS10050	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS10050	PWY-7254	TCA cycle VII (acetate-producers)
BJD12_RS10050	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD12_RS10065	PWY-6700	queuosine biosynthesis
BJD12_RS10140	PWY-6454	vancomycin resistance I
BJD12_RS10140	PWY-6455	vancomycin resistance II
BJD12_RS10155	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS10155	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS10155	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS10155	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS10155	PWY-5723	Rubisco shunt
BJD12_RS10155	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS10155	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS10155	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS10155	PWY-7003	glycerol degradation to butanol
BJD12_RS10155	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS10155	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS10195	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD12_RS10195	PWY-6148	tetrahydromethanopterin biosynthesis
BJD12_RS10195	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BJD12_RS10195	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD12_RS10200	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
BJD12_RS10200	PWY-5368	dimorphecolate biosynthesis
BJD12_RS10200	PWY-5995	linoleate biosynthesis I (plants)
BJD12_RS10200	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
BJD12_RS10200	PWY-6803	phosphatidylcholine acyl editing
BJD12_RS10200	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
BJD12_RS10200	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
BJD12_RS10200	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
BJD12_RS10200	PWY-7470	phosphatidylcholine biosynthesis VII
BJD12_RS10200	PWY-7618	ricinoleate biosynthesis
BJD12_RS10285	PWY-3781	aerobic respiration I (cytochrome c)
BJD12_RS10285	PWY-4521	arsenite oxidation I (respiratory)
BJD12_RS10285	PWY-6692	Fe(II) oxidation
BJD12_RS10285	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD12_RS10300	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
BJD12_RS10300	PWY-6853	ethylene biosynthesis II (microbes)
BJD12_RS10300	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD12_RS10365	PWY-5686	UMP biosynthesis
BJD12_RS10405	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD12_RS10405	PWY-622	starch biosynthesis
BJD12_RS10415	PWY-6749	CMP-legionaminate biosynthesis I
BJD12_RS10420	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD12_RS10420	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS10420	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS10420	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
BJD12_RS10465	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS10465	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD12_RS10465	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD12_RS10465	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS10475	PWY-40	putrescine biosynthesis I
BJD12_RS10475	PWY-43	putrescine biosynthesis II
BJD12_RS10475	PWY-6305	putrescine biosynthesis IV
BJD12_RS10475	PWY-6834	spermidine biosynthesis III
BJD12_RS10500	PWY-6902	chitin degradation II
BJD12_RS10500	PWY-7437	protein <i>O</i>-[<i>N</i>-acetyl]-glucosylation
BJD12_RS10765	PWY-31	canavanine degradation
BJD12_RS10765	PWY-4984	urea cycle
BJD12_RS10765	PWY-6305	putrescine biosynthesis IV
BJD12_RS10765	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
BJD12_RS10790	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD12_RS10790	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS10790	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS10790	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
BJD12_RS10790	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD12_RS10790	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD12_RS10805	PWY-3961	phosphopantothenate biosynthesis II
BJD12_RS10895	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS10915	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS10915	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BJD12_RS11035	PWY-6654	phosphopantothenate biosynthesis III
BJD12_RS11065	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD12_RS11065	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS11065	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD12_RS11065	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD12_RS11065	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS11065	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS11065	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS11065	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BJD12_RS11070	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
BJD12_RS11070	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS11070	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD12_RS11070	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD12_RS11070	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS11070	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS11070	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS11070	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
BJD12_RS11085	PWY-5392	reductive TCA cycle II
BJD12_RS11085	PWY-5537	pyruvate fermentation to acetate V
BJD12_RS11085	PWY-5538	pyruvate fermentation to acetate VI
BJD12_RS11085	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS11085	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS11085	PWY-6728	methylaspartate cycle
BJD12_RS11085	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS11085	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD12_RS11105	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD12_RS11175	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD12_RS11175	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD12_RS11175	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD12_RS11175	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD12_RS11175	PWY-6113	superpathway of mycolate biosynthesis
BJD12_RS11175	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD12_RS11175	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS11175	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS11175	PWY-7663	gondoate biosynthesis (anaerobic)
BJD12_RS11175	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD12_RS11175	PWYG-321	mycolate biosynthesis
BJD12_RS11180	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD12_RS11180	PWY-5981	CDP-diacylglycerol biosynthesis III
BJD12_RS11180	PWY-6453	stigma estolide biosynthesis
BJD12_RS11180	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BJD12_RS11180	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BJD12_RS11180	PWY-7587	oleate biosynthesis III (cyanobacteria)
BJD12_RS11180	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
BJD12_RS11240	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
BJD12_RS11240	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
BJD12_RS11485	PWY-7701	BJD12_RS11485
BJD12_RS11550	PWY-6012	acyl carrier protein metabolism I
BJD12_RS11550	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
BJD12_RS11560	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS11590	PWY-6672	<i>cis</i>-genanyl-CoA degradation
BJD12_RS11590	PWY-7118	chitin degradation to ethanol
BJD12_RS11645	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS11645	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS11645	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS11645	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS11645	PWY-5723	Rubisco shunt
BJD12_RS11645	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS11645	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS11645	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS11645	PWY-7003	glycerol degradation to butanol
BJD12_RS11645	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS11645	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS11695	PWY-5530	sorbitol biosynthesis II
BJD12_RS11695	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS11710	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS11710	PWY-6416	quinate degradation II
BJD12_RS11710	PWY-6707	gallate biosynthesis
BJD12_RS11845	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS11850	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS11850	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS11850	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS11850	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS11850	PWY-5723	Rubisco shunt
BJD12_RS11850	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS11850	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS11850	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS11850	PWY-7003	glycerol degradation to butanol
BJD12_RS11850	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS11850	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS11865	PWY-6531	mannitol cycle
BJD12_RS11905	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS11910	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
BJD12_RS11910	PWY-7248	pectin degradation III
BJD12_RS11915	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
BJD12_RS11970	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD12_RS11970	PWY-6453	stigma estolide biosynthesis
BJD12_RS11970	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
BJD12_RS11970	PWY-7587	oleate biosynthesis III (cyanobacteria)
BJD12_RS12000	PWY-5686	UMP biosynthesis
BJD12_RS12030	PWY-7199	pyrimidine deoxyribonucleosides salvage
BJD12_RS12135	PWY-5663	tetrahydrobiopterin biosynthesis I
BJD12_RS12135	PWY-5664	tetrahydrobiopterin biosynthesis II
BJD12_RS12135	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD12_RS12135	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD12_RS12135	PWY-6983	tetrahydrobiopterin biosynthesis III
BJD12_RS12135	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BJD12_RS12440	PWY-7533	gliotoxin biosynthesis
BJD12_RS12490	PWY-6348	phosphate acquisition
BJD12_RS13105	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS13110	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS13110	PWY-6318	L-phenylalanine degradation IV (mammalian, via side chain)
BJD12_RS13110	PWY-6638	sulfolactate degradation III
BJD12_RS13110	PWY-6642	(<i>R</i>)-cysteate degradation
BJD12_RS13110	PWY-6643	coenzyme M biosynthesis II
BJD12_RS13110	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD12_RS13110	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD12_RS13110	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD12_RS13180	PWY-6825	phosphatidylcholine biosynthesis V
BJD12_RS13205	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD12_RS13205	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD12_RS13205	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD12_RS13205	PWY-6113	superpathway of mycolate biosynthesis
BJD12_RS13205	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD12_RS13205	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS13205	PWY-7663	gondoate biosynthesis (anaerobic)
BJD12_RS13205	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD12_RS13205	PWYG-321	mycolate biosynthesis
BJD12_RS13230	PWY-1081	homogalacturonan degradation
BJD12_RS13230	PWY-7246	pectin degradation II
BJD12_RS13230	PWY-7248	pectin degradation III
BJD12_RS13320	PWY-2622	trehalose biosynthesis IV
BJD12_RS13325	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD12_RS13325	PWY-622	starch biosynthesis
BJD12_RS13410	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD12_RS13415	PWY-5515	L-arabinose degradation II
BJD12_RS13415	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD12_RS13415	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
BJD12_RS13435	PWY-6134	L-tyrosine biosynthesis IV
BJD12_RS13435	PWY-7158	L-phenylalanine degradation V
BJD12_RS13495	PWY-7255	ergothioneine biosynthesis I (bacteria)
BJD12_RS13580	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
BJD12_RS13590	PWY-381	nitrate reduction II (assimilatory)
BJD12_RS13590	PWY-5675	nitrate reduction V (assimilatory)
BJD12_RS13590	PWY-6549	L-glutamine biosynthesis III
BJD12_RS13590	PWY-6963	ammonia assimilation cycle I
BJD12_RS13590	PWY-6964	ammonia assimilation cycle II
BJD12_RS13615	PWY-6854	ethylene biosynthesis III (microbes)
BJD12_RS13620	PWY-6854	ethylene biosynthesis III (microbes)
BJD12_RS13655	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS13655	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BJD12_RS13685	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD12_RS13685	PWY-5981	CDP-diacylglycerol biosynthesis III
BJD12_RS13725	PWY-6004	glycine betaine biosynthesis V (from glycine)
BJD12_RS13740	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS13780	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS13780	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS13875	PWY-6728	methylaspartate cycle
BJD12_RS13875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS13875	PWY-7118	chitin degradation to ethanol
BJD12_RS13875	PWY-7294	xylose degradation IV
BJD12_RS13875	PWY-7295	L-arabinose degradation IV
BJD12_RS13880	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS13915	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS13915	PWY-5743	3-hydroxypropanoate cycle
BJD12_RS13915	PWY-5744	glyoxylate assimilation
BJD12_RS13915	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS13915	PWY-6679	jadomycin biosynthesis
BJD12_RS13915	PWY-6722	candicidin biosynthesis
BJD12_RS13915	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS14095	PWY-5691	urate degradation to allantoin I
BJD12_RS14095	PWY-7394	urate degradation to allantoin II
BJD12_RS14105	PWY-5691	urate degradation to allantoin I
BJD12_RS14105	PWY-7394	urate degradation to allantoin II
BJD12_RS14120	PWY-6832	2-aminoethylphosphonate degradation II
BJD12_RS14150	PWY-4041	&gamma;-glutamyl cycle
BJD12_RS14150	PWY-5826	hypoglycin biosynthesis
BJD12_RS14155	PWY-5169	cyanurate degradation
BJD12_RS14155	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BJD12_RS14255	PWY-2201	folate transformations I
BJD12_RS14255	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD12_RS14275	PWY-2201	folate transformations I
BJD12_RS14275	PWY-3841	folate transformations II
BJD12_RS14285	PWY-7723	BJD12_RS14285
BJD12_RS14295	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BJD12_RS14295	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
BJD12_RS14295	PWY-6936	seleno-amino acid biosynthesis
BJD12_RS14295	PWY-702	L-methionine biosynthesis II
BJD12_RS14455	PWY-5101	L-isoleucine biosynthesis II
BJD12_RS14455	PWY-5103	L-isoleucine biosynthesis III
BJD12_RS14455	PWY-5104	L-isoleucine biosynthesis IV
BJD12_RS14455	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD12_RS14520	PWY-4261	glycerol degradation I
BJD12_RS14530	PWY-4261	glycerol degradation I
BJD12_RS14530	PWY-6118	glycerol-3-phosphate shuttle
BJD12_RS14530	PWY-6952	glycerophosphodiester degradation
BJD12_RS14565	PWY-1361	benzoyl-CoA degradation I (aerobic)
BJD12_RS14565	PWY-2361	3-oxoadipate degradation
BJD12_RS14565	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BJD12_RS14580	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD12_RS14580	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD12_RS14580	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS14580	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD12_RS14585	PWY-6185	4-methylcatechol degradation (<i>ortho</i> cleavage)
BJD12_RS14650	PWY-2201	folate transformations I
BJD12_RS14650	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS14660	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS14670	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS14670	PWY-6578	8-amino-7-oxononanoate biosynthesis III
BJD12_RS14670	PWY-7147	8-amino-7-oxononanoate biosynthesis II
BJD12_RS14675	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
BJD12_RS14750	PWY-622	starch biosynthesis
BJD12_RS14755	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD12_RS14755	PWY-622	starch biosynthesis
BJD12_RS14760	PWY-2661	trehalose biosynthesis V
BJD12_RS14760	PWY-6902	chitin degradation II
BJD12_RS14765	PWY-5941	glycogen degradation II (eukaryotic)
BJD12_RS14765	PWY-6724	starch degradation II
BJD12_RS14765	PWY-6737	starch degradation V
BJD12_RS14765	PWY-7238	sucrose biosynthesis II
BJD12_RS14770	PWY-2661	trehalose biosynthesis V
BJD12_RS14990	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD12_RS14990	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD12_RS14990	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD12_RS15010	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD12_RS15010	PWY-5723	Rubisco shunt
BJD12_RS15025	PWY-5958	acridone alkaloid biosynthesis
BJD12_RS15025	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BJD12_RS15025	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BJD12_RS15040	PWY-5958	acridone alkaloid biosynthesis
BJD12_RS15040	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BJD12_RS15040	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BJD12_RS15070	PWY-6834	spermidine biosynthesis III
BJD12_RS15150	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS15190	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD12_RS15190	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD12_RS15190	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD12_RS15200	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD12_RS15200	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD12_RS15200	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD12_RS15300	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS15300	PWY-6416	quinate degradation II
BJD12_RS15300	PWY-6707	gallate biosynthesis
BJD12_RS15345	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD12_RS15345	PWY-6164	3-dehydroquinate biosynthesis I
BJD12_RS15345	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
BJD12_RS15440	PWY-5794	malonate degradation I (biotin-independent)
BJD12_RS15440	PWY-6060	malonate degradation II (biotin-dependent)
BJD12_RS15450	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS15450	PWY-5743	3-hydroxypropanoate cycle
BJD12_RS15450	PWY-5744	glyoxylate assimilation
BJD12_RS15450	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS15450	PWY-6060	malonate degradation II (biotin-dependent)
BJD12_RS15450	PWY-6679	jadomycin biosynthesis
BJD12_RS15450	PWY-6722	candicidin biosynthesis
BJD12_RS15450	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS15455	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS15455	PWY-5743	3-hydroxypropanoate cycle
BJD12_RS15455	PWY-5744	glyoxylate assimilation
BJD12_RS15455	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS15455	PWY-6060	malonate degradation II (biotin-dependent)
BJD12_RS15455	PWY-6679	jadomycin biosynthesis
BJD12_RS15455	PWY-6722	candicidin biosynthesis
BJD12_RS15455	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS15460	PWY-5796	malonate decarboxylase activation
BJD12_RS15465	PWY-5796	malonate decarboxylase activation
BJD12_RS15525	PWY-6891	thiazole biosynthesis II (Bacillus)
BJD12_RS15525	PWY-6892	thiazole biosynthesis I (E. coli)
BJD12_RS15525	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS15675	PWY-4061	glutathione-mediated detoxification I
BJD12_RS15675	PWY-6842	glutathione-mediated detoxification II
BJD12_RS15675	PWY-7112	4-hydroxy-2-nonenal detoxification
BJD12_RS15675	PWY-7533	gliotoxin biosynthesis
BJD12_RS15940	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS15940	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
BJD12_RS16010	PWY-2941	L-lysine biosynthesis II
BJD12_RS16010	PWY-5097	L-lysine biosynthesis VI
BJD12_RS16065	PWY-5839	menaquinol-7 biosynthesis
BJD12_RS16065	PWY-5844	menaquinol-9 biosynthesis
BJD12_RS16065	PWY-5849	menaquinol-6 biosynthesis
BJD12_RS16065	PWY-5890	menaquinol-10 biosynthesis
BJD12_RS16065	PWY-5891	menaquinol-11 biosynthesis
BJD12_RS16065	PWY-5892	menaquinol-12 biosynthesis
BJD12_RS16065	PWY-5895	menaquinol-13 biosynthesis
BJD12_RS16110	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS16110	PWY-3162	L-tryptophan degradation V (side chain pathway)
BJD12_RS16110	PWY-5057	L-valine degradation II
BJD12_RS16110	PWY-5076	L-leucine degradation III
BJD12_RS16110	PWY-5078	L-isoleucine degradation II
BJD12_RS16110	PWY-5079	L-phenylalanine degradation III
BJD12_RS16110	PWY-5082	L-methionine degradation III
BJD12_RS16110	PWY-5480	pyruvate fermentation to ethanol I
BJD12_RS16110	PWY-5486	pyruvate fermentation to ethanol II
BJD12_RS16110	PWY-5751	phenylethanol biosynthesis
BJD12_RS16110	PWY-6313	serotonin degradation
BJD12_RS16110	PWY-6333	acetaldehyde biosynthesis I
BJD12_RS16110	PWY-6342	noradrenaline and adrenaline degradation
BJD12_RS16110	PWY-6454	vancomycin resistance I
BJD12_RS16110	PWY-6587	pyruvate fermentation to ethanol III
BJD12_RS16110	PWY-6802	salidroside biosynthesis
BJD12_RS16110	PWY-6871	3-methylbutanol biosynthesis
BJD12_RS16110	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS16110	PWY-7013	L-1,2-propanediol degradation
BJD12_RS16110	PWY-7111	pyruvate fermentation to isobutanol (engineered)
BJD12_RS16110	PWY-7118	chitin degradation to ethanol
BJD12_RS16110	PWY-7396	butanol and isobutanol biosynthesis (engineered)
BJD12_RS16170	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS16170	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS16185	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BJD12_RS16185	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BJD12_RS16190	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
BJD12_RS16190	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
BJD12_RS16220	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS16280	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD12_RS16280	PWY-6148	tetrahydromethanopterin biosynthesis
BJD12_RS16280	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BJD12_RS16280	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD12_RS16400	PWY-6906	chitin derivatives degradation
BJD12_RS16400	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
BJD12_RS16400	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
BJD12_RS16485	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD12_RS16485	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD12_RS16485	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD12_RS16625	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS16640	PWY-1001	cellulose biosynthesis
BJD12_RS16650	PWY-6788	cellulose degradation II (fungi)
BJD12_RS16670	PWY-4202	arsenate detoxification I (glutaredoxin)
BJD12_RS16670	PWY-4621	arsenate detoxification II (glutaredoxin)
BJD12_RS16690	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS16690	PWY-181	photorespiration
BJD12_RS16690	PWY-2161	folate polyglutamylation
BJD12_RS16690	PWY-2201	folate transformations I
BJD12_RS16690	PWY-3661	glycine betaine degradation I
BJD12_RS16690	PWY-3661-1	glycine betaine degradation II (mammalian)
BJD12_RS16690	PWY-3841	folate transformations II
BJD12_RS16690	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD12_RS16705	PWY-5525	D-glucuronate degradation I
BJD12_RS16720	PWY-6167	flavin biosynthesis II (archaea)
BJD12_RS16720	PWY-6168	flavin biosynthesis III (fungi)
BJD12_RS16720	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS16725	PWY-6167	flavin biosynthesis II (archaea)
BJD12_RS16725	PWY-6168	flavin biosynthesis III (fungi)
BJD12_RS16725	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD12_RS16730	PWY-6167	flavin biosynthesis II (archaea)
BJD12_RS16730	PWY-6168	flavin biosynthesis III (fungi)
BJD12_RS16740	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BJD12_RS16740	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BJD12_RS16740	PWY-6896	thiamin salvage I
BJD12_RS16740	PWY-6897	thiamin salvage II
BJD12_RS16815	PWY-2201	folate transformations I
BJD12_RS16845	PWY-2201	folate transformations I
BJD12_RS16865	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS16865	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS16870	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS16870	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD12_RS16870	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS16880	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
BJD12_RS16880	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
BJD12_RS16880	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
BJD12_RS16880	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
BJD12_RS16885	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS16885	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS16890	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS16890	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS16910	PWY-2201	folate transformations I
BJD12_RS16910	PWY-5497	purine nucleobases degradation II (anaerobic)
BJD12_RS16940	PWY-6502	oxidized GTP and dGTP detoxification
BJD12_RS16940	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
BJD12_RS16940	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
BJD12_RS16940	PWY-6897	thiamin salvage II
BJD12_RS16940	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
BJD12_RS16940	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
BJD12_RS16940	PWY-7356	thiamin salvage IV (yeast)
BJD12_RS16940	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BJD12_RS16955	PWY-2201	folate transformations I
BJD12_RS16955	PWY-3841	folate transformations II
BJD12_RS17030	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BJD12_RS17040	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS17040	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD12_RS17040	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS17040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS17040	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
BJD12_RS17040	PWY-6549	L-glutamine biosynthesis III
BJD12_RS17040	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD12_RS17040	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD12_RS17040	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS17080	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
BJD12_RS17080	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
BJD12_RS17190	PWY-7039	phosphatidate metabolism, as a signaling molecule
BJD12_RS17215	PWY-3841	folate transformations II
BJD12_RS17215	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
BJD12_RS17215	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
BJD12_RS17215	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
BJD12_RS17215	PWY-7199	pyrimidine deoxyribonucleosides salvage
BJD12_RS17215	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
BJD12_RS17225	PWY-3841	folate transformations II
BJD12_RS17225	PWY-6614	tetrahydrofolate biosynthesis
BJD12_RS17245	PWY-7294	xylose degradation IV
BJD12_RS17245	PWY-7295	L-arabinose degradation IV
BJD12_RS17265	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
BJD12_RS17265	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
BJD12_RS17265	PWY-6268	adenosylcobalamin salvage from cobalamin
BJD12_RS17265	PWY-6269	adenosylcobalamin salvage from cobinamide II
BJD12_RS17355	PWY-5530	sorbitol biosynthesis II
BJD12_RS17385	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS17415	PWY-2582	brassinosteroid biosynthesis II
BJD12_RS17415	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD12_RS17415	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD12_RS17415	PWY-6948	sitosterol degradation to androstenedione
BJD12_RS17415	PWY-699	brassinosteroid biosynthesis I
BJD12_RS17415	PWY-7299	progesterone biosynthesis
BJD12_RS17430	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
BJD12_RS17430	PWY-5723	Rubisco shunt
BJD12_RS17550	PWY-5057	L-valine degradation II
BJD12_RS17550	PWY-5076	L-leucine degradation III
BJD12_RS17550	PWY-5078	L-isoleucine degradation II
BJD12_RS17550	PWY-5101	L-isoleucine biosynthesis II
BJD12_RS17550	PWY-5103	L-isoleucine biosynthesis III
BJD12_RS17550	PWY-5104	L-isoleucine biosynthesis IV
BJD12_RS17550	PWY-5108	L-isoleucine biosynthesis V
BJD12_RS17590	PWY-7731	BJD12_RS17590
BJD12_RS17635	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
BJD12_RS17650	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS17670	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
BJD12_RS17950	PWY-6164	3-dehydroquinate biosynthesis I
BJD12_RS17960	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
BJD12_RS17980	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS17980	PWY-5392	reductive TCA cycle II
BJD12_RS17980	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD12_RS17980	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS17980	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS17980	PWY-6728	methylaspartate cycle
BJD12_RS17980	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS17980	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD12_RS17980	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
BJD12_RS18070	PWY-5515	L-arabinose degradation II
BJD12_RS18070	PWY-5525	D-glucuronate degradation I
BJD12_RS18070	PWY-7378	aminopropanol phosphate biosynthesis II
BJD12_RS18100	PWY-2161	folate polyglutamylation
BJD12_RS18115	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
BJD12_RS18115	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
BJD12_RS18115	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
BJD12_RS18115	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BJD12_RS18500	PWY-6857	retinol biosynthesis
BJD12_RS18565	PWY-5386	methylglyoxal degradation I
BJD12_RS18605	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
BJD12_RS18605	PWY-7676	Kdo8N transfer to lipid IV<sub>A</sub>
BJD12_RS18615	PWY-6823	molybdenum cofactor biosynthesis
BJD12_RS18635	PWY-6823	molybdenum cofactor biosynthesis
BJD12_RS18855	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS18860	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS18860	PWY-6799	fatty acid biosynthesis (plant mitochondria)
BJD12_RS18860	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS18865	PWY-5367	petroselinate biosynthesis
BJD12_RS18865	PWY-5515	L-arabinose degradation II
BJD12_RS18865	PWY-5525	D-glucuronate degradation I
BJD12_RS18865	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD12_RS18865	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD12_RS18865	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD12_RS18865	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD12_RS18865	PWY-6113	superpathway of mycolate biosynthesis
BJD12_RS18865	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD12_RS18865	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS18865	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS18865	PWY-7663	gondoate biosynthesis (anaerobic)
BJD12_RS18865	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD12_RS18865	PWYG-321	mycolate biosynthesis
BJD12_RS18880	PWY-5958	acridone alkaloid biosynthesis
BJD12_RS18880	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
BJD12_RS18880	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
BJD12_RS18915	PWY-5747	2-methylcitrate cycle II
BJD12_RS19040	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS19570	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
BJD12_RS19570	PWY-6167	flavin biosynthesis II (archaea)
BJD12_RS19570	PWY-6168	flavin biosynthesis III (fungi)
BJD12_RS19600	PWY-3781	aerobic respiration I (cytochrome c)
BJD12_RS19600	PWY-4521	arsenite oxidation I (respiratory)
BJD12_RS19600	PWY-6692	Fe(II) oxidation
BJD12_RS19600	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
BJD12_RS19600	PWY-7544	pyruvate to cytochrome <i>bo</i> oxidase electron transfer
BJD12_RS19755	PWY-6317	galactose degradation I (Leloir pathway)
BJD12_RS19775	PWY-723	alkylnitronates degradation
BJD12_RS19795	PWY-6829	tRNA methylation (yeast)
BJD12_RS19795	PWY-7285	methylwyosine biosynthesis
BJD12_RS19795	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
BJD12_RS19815	PWY-5506	methanol oxidation to formaldehyde IV
BJD12_RS19905	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS19925	PWY-5642	2,4-dinitrotoluene degradation
BJD12_RS19925	PWY-6373	acrylate degradation
BJD12_RS19960	PWY-1361	benzoyl-CoA degradation I (aerobic)
BJD12_RS19960	PWY-5109	2-methylbutanoate biosynthesis
BJD12_RS19960	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
BJD12_RS19960	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
BJD12_RS19960	PWY-5177	glutaryl-CoA degradation
BJD12_RS19960	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS19960	PWY-6435	4-hydroxybenzoate biosynthesis V
BJD12_RS19960	PWY-6583	pyruvate fermentation to butanol I
BJD12_RS19960	PWY-6863	pyruvate fermentation to hexanol
BJD12_RS19960	PWY-6883	pyruvate fermentation to butanol II
BJD12_RS19960	PWY-6944	androstenedione degradation
BJD12_RS19960	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
BJD12_RS19960	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
BJD12_RS19960	PWY-7007	methyl ketone biosynthesis
BJD12_RS19960	PWY-7046	4-coumarate degradation (anaerobic)
BJD12_RS19960	PWY-7094	fatty acid salvage
BJD12_RS19960	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
BJD12_RS19960	PWY-735	jasmonic acid biosynthesis
BJD12_RS19960	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
BJD12_RS19960	PWY-7606	docosahexaenoate biosynthesis III (mammals)
BJD12_RS19960	PWY-7726	BJD12_RS19960
BJD12_RS20050	PWY-6902	chitin degradation II
BJD12_RS20440	PWY-4381	fatty acid biosynthesis initiation I
BJD12_RS20440	PWY-5743	3-hydroxypropanoate cycle
BJD12_RS20440	PWY-5744	glyoxylate assimilation
BJD12_RS20440	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
BJD12_RS20440	PWY-6679	jadomycin biosynthesis
BJD12_RS20440	PWY-6722	candicidin biosynthesis
BJD12_RS20440	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS20455	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
BJD12_RS20455	PWY-622	starch biosynthesis
BJD12_RS20465	PWY-5971	palmitate biosynthesis II (bacteria and plants)
BJD12_RS20465	PWY-5973	<i>cis</i>-vaccenate biosynthesis
BJD12_RS20465	PWY-5989	stearate biosynthesis II (bacteria and plants)
BJD12_RS20465	PWY-5994	palmitate biosynthesis I (animals and fungi)
BJD12_RS20465	PWY-6113	superpathway of mycolate biosynthesis
BJD12_RS20465	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
BJD12_RS20465	PWY-6519	8-amino-7-oxononanoate biosynthesis I
BJD12_RS20465	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
BJD12_RS20465	PWY-7663	gondoate biosynthesis (anaerobic)
BJD12_RS20465	PWY-7664	oleate biosynthesis IV (anaerobic)
BJD12_RS20465	PWYG-321	mycolate biosynthesis
BJD12_RS20490	PWY-7294	xylose degradation IV
BJD12_RS20490	PWY-7295	L-arabinose degradation IV
BJD12_RS20490	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS20495	PWY-5667	CDP-diacylglycerol biosynthesis I
BJD12_RS20495	PWY-5981	CDP-diacylglycerol biosynthesis III
BJD12_RS20735	PWY-5392	reductive TCA cycle II
BJD12_RS20735	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD12_RS20735	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS20735	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS20735	PWY-6728	methylaspartate cycle
BJD12_RS20735	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS20735	PWY-7254	TCA cycle VII (acetate-producers)
BJD12_RS20735	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD12_RS20750	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD12_RS20750	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS20750	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD12_RS20750	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD12_RS20755	PWY-6803	phosphatidylcholine acyl editing
BJD12_RS20755	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
BJD12_RS20755	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
BJD12_RS20755	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
BJD12_RS20960	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
BJD12_RS20960	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
BJD12_RS20965	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
BJD12_RS21010	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
BJD12_RS21010	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD12_RS21015	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD12_RS21020	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
BJD12_RS21040	PWY-6123	inosine-5'-phosphate biosynthesis I
BJD12_RS21040	PWY-6124	inosine-5'-phosphate biosynthesis II
BJD12_RS21040	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
BJD12_RS21040	PWY-7234	inosine-5'-phosphate biosynthesis III
BJD12_RS21050	PWY-5392	reductive TCA cycle II
BJD12_RS21050	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
BJD12_RS21050	PWY-5690	TCA cycle II (plants and fungi)
BJD12_RS21050	PWY-5913	TCA cycle VI (obligate autotrophs)
BJD12_RS21050	PWY-6728	methylaspartate cycle
BJD12_RS21050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
BJD12_RS21050	PWY-7254	TCA cycle VII (acetate-producers)
BJD12_RS21050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
BJD12_RS21135	PWY-2201	folate transformations I
BJD12_RS21135	PWY-3841	folate transformations II
BJD12_RS21170	PWY-1801	formaldehyde oxidation II (glutathione-dependent)
BJD12_RS21245	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD12_RS21245	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS21245	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD12_RS21245	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD12_RS21280	PWY-5350	thiosulfate disproportionation III (rhodanese)
BJD12_RS21325	PWY-6825	phosphatidylcholine biosynthesis V
BJD12_RS21335	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
BJD12_RS21335	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
BJD12_RS21335	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
BJD12_RS21340	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS21340	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BJD12_RS21340	PWY-6596	adenosine nucleotides degradation I
BJD12_RS21340	PWY-6606	guanosine nucleotides degradation II
BJD12_RS21340	PWY-6607	guanosine nucleotides degradation I
BJD12_RS21340	PWY-6608	guanosine nucleotides degradation III
BJD12_RS21340	PWY-7185	UTP and CTP dephosphorylation I
BJD12_RS21365	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BJD12_RS21365	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BJD12_RS21365	PWY-7717	BJD12_RS21365
BJD12_RS21370	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BJD12_RS21370	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BJD12_RS21380	PWY-5647	2-nitrobenzoate degradation I
BJD12_RS21380	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
BJD12_RS21380	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
BJD12_RS21380	PWY-6505	L-tryptophan degradation XII (Geobacillus)
BJD12_RS21385	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
BJD12_RS21385	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS21385	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
BJD12_RS21385	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
BJD12_RS21490	PWY-4361	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation
BJD12_RS21490	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
BJD12_RS21515	PWY-5028	L-histidine degradation II
BJD12_RS21515	PWY-5030	L-histidine degradation III
BJD12_RS21525	PWY-5028	L-histidine degradation II
BJD12_RS21525	PWY-5030	L-histidine degradation III
BJD12_RS21530	PWY-5028	L-histidine degradation II
BJD12_RS21530	PWY-5030	L-histidine degradation III
BJD12_RS21585	PWY-3461	L-tyrosine biosynthesis II
BJD12_RS21585	PWY-3462	L-phenylalanine biosynthesis II
BJD12_RS21585	PWY-6120	L-tyrosine biosynthesis III
BJD12_RS21585	PWY-6627	salinosporamide A biosynthesis
BJD12_RS21585	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
BJD12_RS21585	PWY-7626	bacilysin biosynthesis
BJD12_RS21590	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
BJD12_RS21605	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
BJD12_RS21880	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
BJD12_RS21880	PWY-7688	BJD12_RS21880
BJD12_RS22025	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
BJD12_RS22025	PWY-7177	UTP and CTP dephosphorylation II
BJD12_RS22025	PWY-7185	UTP and CTP dephosphorylation I
BJD12_RS22030	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
BJD12_RS22030	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
BJD12_RS22040	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS22040	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS22040	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS22040	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS22040	PWY-5723	Rubisco shunt
BJD12_RS22040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS22040	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS22040	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS22040	PWY-7003	glycerol degradation to butanol
BJD12_RS22040	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS22040	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS22050	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS22055	PWY-7560	methylerythritol phosphate pathway II
BJD12_RS22070	PWY-5381	pyridine nucleotide cycling (plants)
BJD12_RS22070	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
BJD12_RS22070	PWY-6596	adenosine nucleotides degradation I
BJD12_RS22070	PWY-6606	guanosine nucleotides degradation II
BJD12_RS22070	PWY-6607	guanosine nucleotides degradation I
BJD12_RS22070	PWY-6608	guanosine nucleotides degradation III
BJD12_RS22070	PWY-7185	UTP and CTP dephosphorylation I
BJD12_RS22110	PWY-6614	tetrahydrofolate biosynthesis
BJD12_RS22115	PWY-2781	<i>cis</i>-zeatin biosynthesis
BJD12_RS22210	PWY-6910	hydroxymethylpyrimidine salvage
BJD12_RS22210	PWY-7356	thiamin salvage IV (yeast)
BJD12_RS22210	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
BJD12_RS22245	PWY-2941	L-lysine biosynthesis II
BJD12_RS22245	PWY-2942	L-lysine biosynthesis III
BJD12_RS22245	PWY-5097	L-lysine biosynthesis VI
BJD12_RS22260	PWY-7130	L-glucose degradation
BJD12_RS22270	PWY-1042	glycolysis IV (plant cytosol)
BJD12_RS22270	PWY-1622	formaldehyde assimilation I (serine pathway)
BJD12_RS22270	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS22270	PWY-5484	glycolysis II (from fructose 6-phosphate)
BJD12_RS22270	PWY-5723	Rubisco shunt
BJD12_RS22270	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
BJD12_RS22270	PWY-6886	1-butanol autotrophic biosynthesis
BJD12_RS22270	PWY-6901	superpathway of glucose and xylose degradation
BJD12_RS22270	PWY-7003	glycerol degradation to butanol
BJD12_RS22270	PWY-7124	ethylene biosynthesis V (engineered)
BJD12_RS22270	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
BJD12_RS22275	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
BJD12_RS22275	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
BJD12_RS22275	PWY-7242	D-fructuronate degradation
BJD12_RS22275	PWY-7310	D-glucosaminate degradation
BJD12_RS22275	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
BJD12_RS22305	PWY-6807	xyloglucan degradation II (exoglucanase)
BJD12_RS22325	PWY-4261	glycerol degradation I
BJD12_RS22360	PWY-5663	tetrahydrobiopterin biosynthesis I
BJD12_RS22360	PWY-5664	tetrahydrobiopterin biosynthesis II
BJD12_RS22360	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD12_RS22360	PWY-6703	preQ<sub>0</sub> biosynthesis
BJD12_RS22360	PWY-6983	tetrahydrobiopterin biosynthesis III
BJD12_RS22360	PWY-7442	drosopterin and aurodrosopterin biosynthesis
BJD12_RS22375	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
BJD12_RS22375	PWY-6148	tetrahydromethanopterin biosynthesis
BJD12_RS22375	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
BJD12_RS22375	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
BJD12_RS22490	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
BJD12_RS22490	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
BJD12_RS23020	PWY-2941	L-lysine biosynthesis II
BJD12_RS23020	PWY-2942	L-lysine biosynthesis III
BJD12_RS23020	PWY-5097	L-lysine biosynthesis VI
BJD12_RS23020	PWY-6559	spermidine biosynthesis II
BJD12_RS23020	PWY-6562	norspermidine biosynthesis
BJD12_RS23020	PWY-7153	grixazone biosynthesis