locus-tag class description XDD1_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain XDD1_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain XDD1_RS00020 PF02767 DNA polymerase III beta subunit, central domain XDD1_RS00030 PF02463 RecF/RecN/SMC N terminal domain XDD1_RS00075 PF00308 Bacterial dnaA protein XDD1_RS00075 PF08299 Bacterial dnaA protein helix-turn-helix XDD1_RS00075 PF11638 DnaA N-terminal domain XDD1_RS00080 PF02768 DNA polymerase III beta subunit, C-terminal domain XDD1_RS00080 PF02767 DNA polymerase III beta subunit, central domain XDD1_RS00080 PF00712 DNA polymerase III beta subunit, N-terminal domain XDD1_RS00085 PF02463 RecF/RecN/SMC N terminal domain XDD1_RS00090 PF00204 DNA gyrase B XDD1_RS00090 PF18053 DNA gyrase B subunit insert domain XDD1_RS00090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS00090 PF01751 Toprim domain XDD1_RS00090 PF00986 DNA gyrase B subunit, carboxyl terminus XDD1_RS00110 PF02774 Semialdehyde dehydrogenase, dimerisation domain XDD1_RS00110 PF01118 Semialdehyde dehydrogenase, NAD binding domain XDD1_RS00125 PF17864 RuvB AAA lid domain XDD1_RS00125 PF05496 Holliday junction DNA helicase RuvB P-loop domain XDD1_RS00125 PF05491 RuvB C-terminal winged helix domain XDD1_RS00135 PF00743 Flavin-binding monooxygenase-like XDD1_RS00200 PF01380 SIS domain XDD1_RS00205 PF00132 Bacterial transferase hexapeptide (six repeats) XDD1_RS00205 PF12804 MobA-like NTP transferase domain XDD1_RS00210 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XDD1_RS00210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XDD1_RS00215 PF02874 ATP synthase alpha/beta family, beta-barrel domain XDD1_RS00215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XDD1_RS00220 PF00231 ATP synthase XDD1_RS00225 PF02874 ATP synthase alpha/beta family, beta-barrel domain XDD1_RS00225 PF00306 ATP synthase alpha/beta chain, C terminal domain XDD1_RS00225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XDD1_RS00230 PF00213 ATP synthase delta (OSCP) subunit XDD1_RS00235 PF00430 ATP synthase B/B' CF(0) XDD1_RS00240 PF00137 ATP synthase subunit C XDD1_RS00245 PF00119 ATP synthase A chain XDD1_RS00250 PF03899 ATP synthase I chain XDD1_RS00255 PF02527 rRNA small subunit methyltransferase G XDD1_RS00260 PF13932 GidA associated domain XDD1_RS00260 PF01134 Glucose inhibited division protein A XDD1_RS00265 PF00258 Flavodoxin XDD1_RS00270 PF01037 Lrp/AsnC ligand binding domain XDD1_RS00275 PF03590 Aspartate-ammonia ligase XDD1_RS00280 PF05762 VWA domain containing CoxE-like protein XDD1_RS00285 PF17868 AAA lid domain XDD1_RS00285 PF07728 AAA domain (dynein-related subfamily) XDD1_RS00285 PF12592 Protein of unknown function (DUF3763) XDD1_RS00290 PF00005 ABC transporter XDD1_RS00295 PF02653 Branched-chain amino acid transport system / permease component XDD1_RS00300 PF13407 Periplasmic binding protein domain XDD1_RS00305 PF00294 pfkB family carbohydrate kinase XDD1_RS00310 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS00315 PF07690 Major Facilitator Superfamily XDD1_RS00345 PF00474 Sodium:solute symporter family XDD1_RS00350 PF04341 Protein of unknown function, DUF485 XDD1_RS00355 PF16177 Acetyl-coenzyme A synthetase N-terminus XDD1_RS00355 PF00501 AMP-binding enzyme XDD1_RS00355 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS00360 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XDD1_RS00360 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XDD1_RS00365 PF03473 MOSC domain XDD1_RS00365 PF03475 3-alpha domain XDD1_RS00370 PF00579 tRNA synthetases class I (W and Y) XDD1_RS00375 PF13419 Haloacid dehalogenase-like hydrolase XDD1_RS00380 PF00834 Ribulose-phosphate 3 epimerase family XDD1_RS00385 PF02086 D12 class N6 adenine-specific DNA methyltransferase XDD1_RS00390 PF05036 Sporulation related domain XDD1_RS00395 PF01761 3-dehydroquinate synthase XDD1_RS00400 PF01202 Shikimate kinase XDD1_RS00405 PF00263 Bacterial type II and III secretion system protein XDD1_RS00405 PF03958 Bacterial type II/III secretion system short domain XDD1_RS00425 PF00905 Penicillin binding protein transpeptidase domain XDD1_RS00425 PF00912 Transglycosylase XDD1_RS00425 PF17092 Penicillin-binding protein OB-like domain XDD1_RS00430 PF00293 NUDIX domain XDD1_RS00435 PF07095 Intracellular growth attenuator protein IgaA XDD1_RS00440 PF01479 S4 domain XDD1_RS00445 PF01430 Hsp33 protein XDD1_RS00450 PF01293 Phosphoenolpyruvate carboxykinase XDD1_RS00455 PF07690 Major Facilitator Superfamily XDD1_RS00470 PF00501 AMP-binding enzyme XDD1_RS00470 PF14535 AMP-binding enzyme C-terminal domain XDD1_RS00480 PF07690 Major Facilitator Superfamily XDD1_RS00485 PF03466 LysR substrate binding domain XDD1_RS00485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS00495 PF01384 Phosphate transporter family XDD1_RS00500 PF10625 Universal stress protein B (UspB) XDD1_RS00505 PF00582 Universal stress protein family XDD1_RS00510 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XDD1_RS00510 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain XDD1_RS00515 PF04445 Putative SAM-dependent methyltransferase XDD1_RS00520 PF01432 Peptidase family M3 XDD1_RS00530 PF03129 Anticodon binding domain XDD1_RS00530 PF02824 TGS domain XDD1_RS00530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XDD1_RS00530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XDD1_RS00550 PF11941 Domain of unknown function (DUF3459) XDD1_RS00550 PF00128 Alpha amylase, catalytic domain XDD1_RS00555 PF00367 phosphotransferase system, EIIB XDD1_RS00555 PF02378 Phosphotransferase system, EIIC XDD1_RS00565 PF07848 PaaX-like protein XDD1_RS00565 PF08223 PaaX-like protein C-terminal domain XDD1_RS00570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS00570 PF03466 LysR substrate binding domain XDD1_RS00575 PF13358 DDE superfamily endonuclease XDD1_RS00590 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system XDD1_RS00595 PF08340 Domain of unknown function (DUF1732) XDD1_RS00595 PF03755 YicC-like family, N-terminal region XDD1_RS00600 PF01138 3' exoribonuclease family, domain 1 XDD1_RS00600 PF03725 3' exoribonuclease family, domain 2 XDD1_RS00605 PF00156 Phosphoribosyl transferase domain XDD1_RS00610 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS00615 PF00692 dUTPase XDD1_RS00620 PF04127 DNA / pantothenate metabolism flavoprotein XDD1_RS00620 PF02441 Flavoprotein XDD1_RS00625 PF04002 RadC-like JAB domain XDD1_RS00630 PF00830 Ribosomal L28 family XDD1_RS00635 PF00471 Ribosomal protein L33 XDD1_RS00640 PF00534 Glycosyl transferases group 1 XDD1_RS00650 PF13439 Glycosyltransferase Family 4 XDD1_RS00650 PF00534 Glycosyl transferases group 1 XDD1_RS00660 PF04932 O-Antigen ligase XDD1_RS00665 PF06827 Zinc finger found in FPG and IleRS XDD1_RS00665 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XDD1_RS00665 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XDD1_RS00670 PF01467 Cytidylyltransferase-like XDD1_RS00675 PF00535 Glycosyl transferase family 2 XDD1_RS00680 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XDD1_RS00685 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XDD1_RS00690 PF13439 Glycosyltransferase Family 4 XDD1_RS00690 PF00534 Glycosyl transferases group 1 XDD1_RS00695 PF00534 Glycosyl transferases group 1 XDD1_RS00695 PF13439 Glycosyltransferase Family 4 XDD1_RS00705 PF00535 Glycosyl transferase family 2 XDD1_RS00710 PF00535 Glycosyl transferase family 2 XDD1_RS00725 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XDD1_RS00730 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XDD1_RS00735 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS00740 PF00155 Aminotransferase class I and II XDD1_RS00745 PF00107 Zinc-binding dehydrogenase XDD1_RS00745 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS00750 PF04748 Divergent polysaccharide deacetylase XDD1_RS00755 PF01551 Peptidase family M23 XDD1_RS00775 PF00581 Rhodanese-like domain XDD1_RS00780 PF02556 Preprotein translocase subunit SecB XDD1_RS00785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XDD1_RS00785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XDD1_RS00790 PF00132 Bacterial transferase hexapeptide (six repeats) XDD1_RS00790 PF06426 Serine acetyltransferase, N-terminal XDD1_RS00795 PF00588 SpoU rRNA Methylase family XDD1_RS00810 PF02350 UDP-N-acetylglucosamine 2-epimerase XDD1_RS00820 PF02719 Polysaccharide biosynthesis protein XDD1_RS00820 PF08485 Polysaccharide biosynthesis protein C-terminal XDD1_RS00825 PF00534 Glycosyl transferases group 1 XDD1_RS00830 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XDD1_RS00830 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XDD1_RS00830 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XDD1_RS00830 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XDD1_RS00835 PF00483 Nucleotidyl transferase XDD1_RS00835 PF01050 Mannose-6-phosphate isomerase XDD1_RS00855 PF00672 HAMP domain XDD1_RS00855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS00855 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS00855 PF16527 Two-component sensor protein CpxA, periplasmic domain XDD1_RS00860 PF00072 Response regulator receiver domain XDD1_RS00860 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS00865 PF07813 LTXXQ motif family protein XDD1_RS00900 PF16916 Dimerisation domain of Zinc Transporter XDD1_RS00900 PF01545 Cation efflux family XDD1_RS00905 PF00365 Phosphofructokinase XDD1_RS00915 PF00121 Triosephosphate isomerase XDD1_RS00920 PF07305 Protein of unknown function (DUF1454) XDD1_RS00925 PF05656 Protein of unknown function (DUF805) XDD1_RS00930 PF00175 Oxidoreductase NAD-binding domain XDD1_RS00930 PF00970 Oxidoreductase FAD-binding domain XDD1_RS00935 PF07690 Major Facilitator Superfamily XDD1_RS00940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XDD1_RS00940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XDD1_RS00945 PF00230 Major intrinsic protein XDD1_RS00950 PF06005 Cell division protein ZapB XDD1_RS00955 PF03737 Aldolase/RraA XDD1_RS00960 PF01040 UbiA prenyltransferase family XDD1_RS00965 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS00965 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS00970 PF00227 Proteasome subunit XDD1_RS00975 PF05036 Sporulation related domain XDD1_RS00980 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS00985 PF17764 3′ DNA-binding domain (3′BD) XDD1_RS00985 PF00271 Helicase conserved C-terminal domain XDD1_RS00985 PF00270 DEAD/DEAH box helicase XDD1_RS00985 PF18074 Primosomal protein N C-terminal domain XDD1_RS00985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XDD1_RS00990 PF01197 Ribosomal protein L31 XDD1_RS00995 PF01340 Met Apo-repressor, MetJ XDD1_RS01000 PF01053 Cys/Met metabolism PLP-dependent enzyme XDD1_RS01005 PF00696 Amino acid kinase family XDD1_RS01005 PF00742 Homoserine dehydrogenase XDD1_RS01005 PF03447 Homoserine dehydrogenase, NAD binding domain XDD1_RS01010 PF00311 Phosphoenolpyruvate carboxylase XDD1_RS01015 PF03466 LysR substrate binding domain XDD1_RS01015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS01020 PF07690 Major Facilitator Superfamily XDD1_RS01030 PF07690 Major Facilitator Superfamily XDD1_RS01035 PF02219 Methylenetetrahydrofolate reductase XDD1_RS01040 PF03466 LysR substrate binding domain XDD1_RS01040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS01055 PF01546 Peptidase family M20/M25/M40 XDD1_RS01055 PF07687 Peptidase dimerisation domain XDD1_RS01060 PF01118 Semialdehyde dehydrogenase, NAD binding domain XDD1_RS01060 PF02774 Semialdehyde dehydrogenase, dimerisation domain XDD1_RS01065 PF00696 Amino acid kinase family XDD1_RS01070 PF00764 Arginosuccinate synthase XDD1_RS01075 PF00206 Lyase XDD1_RS01075 PF14698 Argininosuccinate lyase C-terminal XDD1_RS01080 PF13358 DDE superfamily endonuclease XDD1_RS01085 PF00665 Integrase core domain XDD1_RS01085 PF13276 HTH-like domain XDD1_RS01085 PF13333 Integrase core domain XDD1_RS01110 PF02371 Transposase IS116/IS110/IS902 family XDD1_RS01110 PF01548 Transposase XDD1_RS01145 PF03129 Anticodon binding domain XDD1_RS01145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XDD1_RS01145 PF04073 Aminoacyl-tRNA editing domain XDD1_RS01160 PF13358 DDE superfamily endonuclease XDD1_RS01190 PF01548 Transposase XDD1_RS01190 PF02371 Transposase IS116/IS110/IS902 family XDD1_RS01215 PF13276 HTH-like domain XDD1_RS01215 PF00665 Integrase core domain XDD1_RS01215 PF13333 Integrase core domain XDD1_RS01220 PF13358 DDE superfamily endonuclease XDD1_RS01225 PF03466 LysR substrate binding domain XDD1_RS01225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XDD1_RS01235 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS01240 PF07226 Protein of unknown function (DUF1422) XDD1_RS01245 PF05958 tRNA (Uracil-5-)-methyltransferase XDD1_RS01250 PF01177 Asp/Glu/Hydantoin racemase XDD1_RS01285 PF01565 FAD binding domain XDD1_RS01285 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XDD1_RS01290 PF08279 HTH domain XDD1_RS01290 PF03099 Biotin/lipoate A/B protein ligase family XDD1_RS01290 PF02237 Biotin protein ligase C terminal domain XDD1_RS01295 PF00485 Phosphoribulokinase / Uridine kinase family XDD1_RS01320 PF03144 Elongation factor Tu domain 2 XDD1_RS01320 PF03143 Elongation factor Tu C-terminal domain XDD1_RS01320 PF00009 Elongation factor Tu GTP binding domain XDD1_RS01325 PF00210 Ferritin-like domain XDD1_RS01330 PF00338 Ribosomal protein S10p/S20e XDD1_RS01335 PF00297 Ribosomal protein L3 XDD1_RS01340 PF00573 Ribosomal protein L4/L1 family XDD1_RS01345 PF00276 Ribosomal protein L23 XDD1_RS01350 PF03947 Ribosomal Proteins L2, C-terminal domain XDD1_RS01350 PF00181 Ribosomal Proteins L2, RNA binding domain XDD1_RS01355 PF00203 Ribosomal protein S19 XDD1_RS01360 PF00237 Ribosomal protein L22p/L17e XDD1_RS01365 PF00189 Ribosomal protein S3, C-terminal domain XDD1_RS01365 PF07650 KH domain XDD1_RS01370 PF00252 Ribosomal protein L16p/L10e XDD1_RS01375 PF00831 Ribosomal L29 protein XDD1_RS01380 PF00366 Ribosomal protein S17 XDD1_RS01385 PF00238 Ribosomal protein L14p/L23e XDD1_RS01390 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XDD1_RS01390 PF00467 KOW motif XDD1_RS01395 PF00281 Ribosomal protein L5 XDD1_RS01395 PF00673 ribosomal L5P family C-terminus XDD1_RS01400 PF00253 Ribosomal protein S14p/S29e XDD1_RS01405 PF00410 Ribosomal protein S8 XDD1_RS01410 PF00347 Ribosomal protein L6 XDD1_RS01415 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XDD1_RS01420 PF00333 Ribosomal protein S5, N-terminal domain XDD1_RS01420 PF03719 Ribosomal protein S5, C-terminal domain XDD1_RS01425 PF00327 Ribosomal protein L30p/L7e XDD1_RS01430 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XDD1_RS01435 PF00344 SecY translocase XDD1_RS01440 PF00444 Ribosomal protein L36 XDD1_RS01445 PF00416 Ribosomal protein S13/S18 XDD1_RS01450 PF00411 Ribosomal protein S11 XDD1_RS01455 PF01479 S4 domain XDD1_RS01455 PF00163 Ribosomal protein S4/S9 N-terminal domain XDD1_RS01460 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XDD1_RS01460 PF01000 RNA polymerase Rpb3/RpoA insert domain XDD1_RS01460 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XDD1_RS01465 PF01196 Ribosomal protein L17 XDD1_RS01470 PF13411 MerR HTH family regulatory protein XDD1_RS01475 PF03889 Alternative ribosome-rescue factor A XDD1_RS01480 PF02254 TrkA-N domain XDD1_RS01480 PF02080 TrkA-C domain XDD1_RS01485 PF01029 NusB family XDD1_RS01485 PF01189 16S rRNA methyltransferase RsmB/F XDD1_RS01490 PF00551 Formyl transferase XDD1_RS01490 PF02911 Formyl transferase, C-terminal domain XDD1_RS01495 PF01327 Polypeptide deformylase XDD1_RS01500 PF17782 DprA winged helix domain XDD1_RS01500 PF02481 DNA recombination-mediator protein A XDD1_RS01505 PF01396 Topoisomerase DNA binding C4 zinc finger XDD1_RS01510 PF01300 Telomere recombination XDD1_RS01515 PF08501 Shikimate dehydrogenase substrate binding domain XDD1_RS01515 PF01488 Shikimate / quinate 5-dehydrogenase XDD1_RS01515 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XDD1_RS01520 PF07369 Protein of unknown function (DUF1488) XDD1_RS01525 PF00132 Bacterial transferase hexapeptide (six repeats) XDD1_RS01560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS01560 PF03466 LysR substrate binding domain XDD1_RS01565 PF04219 Protein of unknown function, DUF XDD1_RS01570 PF01078 Magnesium chelatase, subunit ChlI XDD1_RS01570 PF13335 Magnesium chelatase, subunit ChlI C-terminal XDD1_RS01575 PF00205 Thiamine pyrophosphate enzyme, central domain XDD1_RS01575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XDD1_RS01575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XDD1_RS01585 PF01063 Amino-transferase class IV XDD1_RS01590 PF00920 Dehydratase family XDD1_RS01595 PF00585 C-terminal regulatory domain of Threonine dehydratase XDD1_RS01595 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS01600 PF07690 Major Facilitator Superfamily XDD1_RS01605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS01605 PF00529 HlyD membrane-fusion protein of T1SS XDD1_RS01615 PF03466 LysR substrate binding domain XDD1_RS01615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS01620 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XDD1_RS01620 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XDD1_RS01625 PF00850 Histone deacetylase domain XDD1_RS01630 PF13361 UvrD-like helicase C-terminal domain XDD1_RS01630 PF00580 UvrD/REP helicase N-terminal domain XDD1_RS01635 PF02541 Ppx/GppA phosphatase family XDD1_RS01640 PF00271 Helicase conserved C-terminal domain XDD1_RS01640 PF00270 DEAD/DEAH box helicase XDD1_RS01645 PF00085 Thioredoxin XDD1_RS01650 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XDD1_RS01650 PF07498 Rho termination factor, N-terminal domain XDD1_RS01650 PF07497 Rho termination factor, RNA-binding domain XDD1_RS01655 PF00953 Glycosyl transferase family 4 XDD1_RS01660 PF02706 Chain length determinant protein XDD1_RS01665 PF02350 UDP-N-acetylglucosamine 2-epimerase XDD1_RS01670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XDD1_RS01670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XDD1_RS01670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XDD1_RS01675 PF16363 GDP-mannose 4,6 dehydratase XDD1_RS01680 PF00483 Nucleotidyl transferase XDD1_RS01690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XDD1_RS01695 PF01943 Polysaccharide biosynthesis protein XDD1_RS01700 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 XDD1_RS01705 PF06899 WzyE protein, O-antigen assembly polymerase XDD1_RS01710 PF03808 Glycosyl transferase WecB/TagA/CpsF family XDD1_RS01715 PF00324 Amino acid permease XDD1_RS01740 PF07219 HemY protein N-terminus XDD1_RS01740 PF07719 Tetratricopeptide repeat XDD1_RS01745 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase XDD1_RS01750 PF02602 Uroporphyrinogen-III synthase HemD XDD1_RS01755 PF03900 Porphobilinogen deaminase, C-terminal domain XDD1_RS01755 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XDD1_RS01760 PF12633 Adenylate cyclase NT domain XDD1_RS01760 PF01295 Adenylate cyclase, class-I XDD1_RS01765 PF01491 Frataxin-like domain XDD1_RS01770 PF13627 Prokaryotic lipoprotein-attachment site XDD1_RS01775 PF01678 Diaminopimelate epimerase XDD1_RS01780 PF04340 Protein of unknown function, DUF484 XDD1_RS01785 PF02899 Phage integrase, N-terminal SAM-like domain XDD1_RS01785 PF00589 Phage integrase family XDD1_RS01790 PF13419 Haloacid dehalogenase-like hydrolase XDD1_RS01795 PF00580 UvrD/REP helicase N-terminal domain XDD1_RS01795 PF13361 UvrD-like helicase C-terminal domain XDD1_RS01800 PF01544 CorA-like Mg2+ transporter protein XDD1_RS01805 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XDD1_RS01810 PF00892 EamA-like transporter family XDD1_RS01820 PF03061 Thioesterase superfamily XDD1_RS01825 PF02253 Phospholipase A1 XDD1_RS01830 PF16124 RecQ zinc-binding XDD1_RS01830 PF00270 DEAD/DEAH box helicase XDD1_RS01830 PF09382 RQC domain XDD1_RS01830 PF00271 Helicase conserved C-terminal domain XDD1_RS01830 PF00570 HRDC domain XDD1_RS01835 PF12146 Serine aminopeptidase, S33 XDD1_RS01845 PF00083 Sugar (and other) transporter XDD1_RS01845 PF07690 Major Facilitator Superfamily XDD1_RS01850 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS01865 PF05656 Protein of unknown function (DUF805) XDD1_RS01870 PF02627 Carboxymuconolactone decarboxylase family XDD1_RS01875 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS01875 PF00155 Aminotransferase class I and II XDD1_RS01890 PF07690 Major Facilitator Superfamily XDD1_RS01895 PF07690 Major Facilitator Superfamily XDD1_RS01900 PF12794 Mechanosensitive ion channel inner membrane domain 1 XDD1_RS01900 PF00924 Mechanosensitive ion channel XDD1_RS01900 PF12795 Mechanosensitive ion channel porin domain XDD1_RS01905 PF02666 Phosphatidylserine decarboxylase XDD1_RS01910 PF03193 RsgA GTPase XDD1_RS01915 PF00929 Exonuclease XDD1_RS01930 PF07690 Major Facilitator Superfamily XDD1_RS01940 PF07690 Major Facilitator Superfamily XDD1_RS01970 PF03466 LysR substrate binding domain XDD1_RS01970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS01975 PF07690 Major Facilitator Superfamily XDD1_RS01985 PF01212 Beta-eliminating lyase XDD1_RS01990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XDD1_RS01990 PF08028 Acyl-CoA dehydrogenase, C-terminal domain XDD1_RS01995 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal XDD1_RS01995 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal XDD1_RS02000 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XDD1_RS02005 PF01520 N-acetylmuramoyl-L-alanine amidase XDD1_RS02010 PF08676 MutL C terminal dimerisation domain XDD1_RS02010 PF01119 DNA mismatch repair protein, C-terminal domain XDD1_RS02020 PF17209 Hfq protein XDD1_RS02025 PF13167 GTP-binding GTPase N-terminal XDD1_RS02025 PF16360 GTP-binding GTPase Middle Region XDD1_RS02025 PF01926 50S ribosome-binding GTPase XDD1_RS02030 PF01145 SPFH domain / Band 7 family XDD1_RS02030 PF12221 Bacterial membrane protein N terminal XDD1_RS02035 PF01145 SPFH domain / Band 7 family XDD1_RS02040 PF00709 Adenylosuccinate synthetase XDD1_RS02045 PF02082 Transcriptional regulator XDD1_RS02055 PF00588 SpoU rRNA Methylase family XDD1_RS02055 PF08032 RNA 2'-O ribose methyltransferase substrate binding XDD1_RS02060 PF01250 Ribosomal protein S6 XDD1_RS02065 PF00436 Single-strand binding protein family XDD1_RS02070 PF01084 Ribosomal protein S18 XDD1_RS02075 PF01281 Ribosomal protein L9, N-terminal domain XDD1_RS02075 PF03948 Ribosomal protein L9, C-terminal domain XDD1_RS02090 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XDD1_RS02090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XDD1_RS02095 PF00459 Inositol monophosphatase family XDD1_RS02100 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) XDD1_RS02105 PF06526 Protein of unknown function (DUF1107) XDD1_RS02110 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system XDD1_RS02115 PF07927 HicA toxin of bacterial toxin-antitoxin, XDD1_RS02120 PF01625 Peptide methionine sulfoxide reductase XDD1_RS02125 PF01103 Surface antigen XDD1_RS02125 PF07244 Surface antigen variable number repeat XDD1_RS02125 PF17243 POTRA domain TamA domain 1 XDD1_RS02130 PF04357 TamB, inner membrane protein subunit of TAM complex XDD1_RS02135 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like XDD1_RS02140 PF00719 Inorganic pyrophosphatase XDD1_RS02145 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain XDD1_RS02150 PF08245 Mur ligase middle domain XDD1_RS02150 PF01225 Mur ligase family, catalytic domain XDD1_RS02150 PF02875 Mur ligase family, glutamate ligase domain XDD1_RS02155 PF02863 Arginine repressor, C-terminal domain XDD1_RS02155 PF01316 Arginine repressor, DNA binding domain XDD1_RS02160 PF00056 lactate/malate dehydrogenase, NAD binding domain XDD1_RS02160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XDD1_RS02165 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS02180 PF00348 Polyprenyl synthetase XDD1_RS02185 PF00829 Ribosomal prokaryotic L21 protein XDD1_RS02190 PF01016 Ribosomal L27 protein XDD1_RS02195 PF01018 GTP1/OBG XDD1_RS02195 PF01926 50S ribosome-binding GTPase XDD1_RS02205 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH XDD1_RS02210 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XDD1_RS02215 PF01272 Transcription elongation factor, GreA/GreB, C-term XDD1_RS02215 PF03449 Transcription elongation factor, N-terminal XDD1_RS02220 PF01985 CRS1 / YhbY (CRM) domain XDD1_RS02225 PF01728 FtsJ-like methyltransferase XDD1_RS02230 PF06480 FtsH Extracellular XDD1_RS02230 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS02230 PF17862 AAA+ lid domain XDD1_RS02230 PF01434 Peptidase family M41 XDD1_RS02235 PF00809 Pterin binding enzyme XDD1_RS02240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XDD1_RS02240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XDD1_RS02240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XDD1_RS02240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XDD1_RS02245 PF03840 Preprotein translocase SecG subunit XDD1_RS02260 PF17384 RimP C-terminal SH3 domain XDD1_RS02260 PF02576 RimP N-terminal domain XDD1_RS02265 PF00575 S1 RNA binding domain XDD1_RS02265 PF13184 NusA-like KH domain XDD1_RS02265 PF08529 NusA N-terminal domain XDD1_RS02270 PF11987 Translation-initiation factor 2 XDD1_RS02270 PF08364 Bacterial translation initiation factor IF-2 associated region XDD1_RS02270 PF04760 Translation initiation factor IF-2, N-terminal region XDD1_RS02270 PF03144 Elongation factor Tu domain 2 XDD1_RS02270 PF00009 Elongation factor Tu GTP binding domain XDD1_RS02275 PF02033 Ribosome-binding factor A XDD1_RS02280 PF09157 Pseudouridine synthase II TruB, C-terminal XDD1_RS02280 PF16198 tRNA pseudouridylate synthase B C-terminal domain XDD1_RS02280 PF01509 TruB family pseudouridylate synthase (N terminal domain) XDD1_RS02285 PF00312 Ribosomal protein S15 XDD1_RS02290 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XDD1_RS02290 PF03725 3' exoribonuclease family, domain 2 XDD1_RS02290 PF00575 S1 RNA binding domain XDD1_RS02290 PF01138 3' exoribonuclease family, domain 1 XDD1_RS02290 PF00013 KH domain XDD1_RS02295 PF07719 Tetratricopeptide repeat XDD1_RS02295 PF13181 Tetratricopeptide repeat XDD1_RS02300 PF12343 Cold shock protein DEAD box A XDD1_RS02300 PF00270 DEAD/DEAH box helicase XDD1_RS02300 PF03880 DbpA RNA binding domain XDD1_RS02300 PF00271 Helicase conserved C-terminal domain XDD1_RS02310 PF04397 LytTr DNA-binding domain XDD1_RS02310 PF00072 Response regulator receiver domain XDD1_RS02315 PF07694 5TMR of 5TMR-LYT XDD1_RS02315 PF06580 Histidine kinase XDD1_RS02320 PF11924 Inverse autotransporter, beta-domain XDD1_RS02320 PF09134 Invasin, domain 3 XDD1_RS02320 PF02369 Bacterial Ig-like domain (group 1) XDD1_RS02325 PF13533 Biotin-lipoyl like XDD1_RS02340 PF02036 SCP-2 sterol transfer family XDD1_RS02345 PF13508 Acetyltransferase (GNAT) domain XDD1_RS02350 PF01541 GIY-YIG catalytic domain XDD1_RS02360 PF01243 Pyridoxamine 5'-phosphate oxidase XDD1_RS02370 PF03477 ATP cone domain XDD1_RS02370 PF13597 Anaerobic ribonucleoside-triphosphate reductase XDD1_RS02375 PF01042 Endoribonuclease L-PSP XDD1_RS02380 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain XDD1_RS02380 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain XDD1_RS02385 PF00149 Calcineurin-like phosphoesterase XDD1_RS02390 PF00583 Acetyltransferase (GNAT) family XDD1_RS02395 PF00384 Molybdopterin oxidoreductase XDD1_RS02420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XDD1_RS02420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XDD1_RS02430 PF12706 Beta-lactamase superfamily domain XDD1_RS02450 PF00497 Bacterial extracellular solute-binding proteins, family 3 XDD1_RS02455 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS02460 PF00005 ABC transporter XDD1_RS02465 PF00497 Bacterial extracellular solute-binding proteins, family 3 XDD1_RS02470 PF04303 PrpF protein XDD1_RS02475 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XDD1_RS02485 PF00583 Acetyltransferase (GNAT) family XDD1_RS02490 PF06877 Regulator of ribonuclease activity B XDD1_RS02495 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XDD1_RS02495 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XDD1_RS02505 PF03553 Na+/H+ antiporter family XDD1_RS02510 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS02520 PF13358 DDE superfamily endonuclease XDD1_RS02535 PF09386 Antitoxin ParD XDD1_RS02540 PF05016 ParE toxin of type II toxin-antitoxin system, parDE XDD1_RS02555 PF04754 Putative transposase, YhgA-like XDD1_RS02585 PF13358 DDE superfamily endonuclease XDD1_RS02605 PF01053 Cys/Met metabolism PLP-dependent enzyme XDD1_RS02610 PF06316 Enterobacterial Ail/Lom protein XDD1_RS02615 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XDD1_RS02620 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin XDD1_RS02625 PF04754 Putative transposase, YhgA-like XDD1_RS02645 PF17885 Styrene monooxygenase A putative substrate binding domain XDD1_RS02650 PF01613 Flavin reductase like domain XDD1_RS02655 PF04199 Putative cyclase XDD1_RS02660 PF01593 Flavin containing amine oxidoreductase XDD1_RS02670 PF00005 ABC transporter XDD1_RS02670 PF12848 ABC transporter XDD1_RS02670 PF16326 ABC transporter C-terminal domain XDD1_RS02680 PF02342 TerD domain XDD1_RS02685 PF12833 Helix-turn-helix domain XDD1_RS02710 PF01850 PIN domain XDD1_RS02735 PF01494 FAD binding domain XDD1_RS02740 PF07883 Cupin domain XDD1_RS02745 PF01557 Fumarylacetoacetate (FAA) hydrolase family XDD1_RS02750 PF00795 Carbon-nitrogen hydrolase XDD1_RS02755 PF17645 Arylmalonate decarboxylase XDD1_RS02780 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) XDD1_RS02785 PF01867 CRISPR associated protein Cas1 XDD1_RS02795 PF09704 CRISPR-associated protein (Cas_Cas5) XDD1_RS02815 PF00271 Helicase conserved C-terminal domain XDD1_RS02815 PF18019 HD domain XDD1_RS02815 PF00270 DEAD/DEAH box helicase XDD1_RS02825 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS02825 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XDD1_RS02830 PF01202 Shikimate kinase XDD1_RS02835 PF02447 GntP family permease XDD1_RS02860 PF03062 MBOAT, membrane-bound O-acyltransferase family XDD1_RS02865 PF13358 DDE superfamily endonuclease XDD1_RS02870 PF03062 MBOAT, membrane-bound O-acyltransferase family XDD1_RS02875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XDD1_RS02895 PF02342 TerD domain XDD1_RS02900 PF03741 Integral membrane protein TerC family XDD1_RS02905 PF05099 Tellurite resistance protein TerB XDD1_RS02910 PF02342 TerD domain XDD1_RS02915 PF02342 TerD domain XDD1_RS02930 PF11202 Phosphoribosyl transferase (PRTase) XDD1_RS02930 PF15608 PELOTA RNA binding domain XDD1_RS02945 PF03350 Uncharacterized protein family, UPF0114 XDD1_RS02955 PF00756 Putative esterase XDD1_RS02955 PF11806 Domain of unknown function (DUF3327) XDD1_RS02960 PF00892 EamA-like transporter family XDD1_RS02965 PF13505 Outer membrane protein beta-barrel domain XDD1_RS02985 PF11412 Disulphide bond corrector protein DsbC XDD1_RS02985 PF02683 Cytochrome C biogenesis protein transmembrane region XDD1_RS02985 PF13098 Thioredoxin-like domain XDD1_RS02990 PF03605 Anaerobic c4-dicarboxylate membrane transporter XDD1_RS02995 PF00206 Lyase XDD1_RS02995 PF10415 Fumarase C C-terminus XDD1_RS03000 PF04186 FxsA cytoplasmic membrane protein XDD1_RS03005 PF00166 Chaperonin 10 Kd subunit XDD1_RS03010 PF00118 TCP-1/cpn60 chaperonin family XDD1_RS03015 PF13698 Domain of unknown function (DUF4156) XDD1_RS03020 PF04055 Radical SAM superfamily XDD1_RS03025 PF09285 Elongation factor P, C-terminal XDD1_RS03025 PF01132 Elongation factor P (EF-P) OB domain XDD1_RS03025 PF08207 Elongation factor P (EF-P) KOW-like domain XDD1_RS03030 PF00893 Small Multidrug Resistance protein XDD1_RS03035 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS03040 PF01381 Helix-turn-helix XDD1_RS03045 PF01156 Inosine-uridine preferring nucleoside hydrolase XDD1_RS03050 PF01266 FAD dependent oxidoreductase XDD1_RS03060 PF00171 Aldehyde dehydrogenase family XDD1_RS03065 PF00245 Alkaline phosphatase XDD1_RS03080 PF00144 Beta-lactamase XDD1_RS03090 PF03739 Lipopolysaccharide export system permease LptF/LptG XDD1_RS03095 PF03739 Lipopolysaccharide export system permease LptF/LptG XDD1_RS03100 PF02789 Cytosol aminopeptidase family, N-terminal domain XDD1_RS03100 PF00883 Cytosol aminopeptidase family, catalytic domain XDD1_RS03105 PF04364 DNA polymerase III chi subunit, HolC XDD1_RS03110 PF10458 Valyl tRNA synthetase tRNA binding arm XDD1_RS03110 PF00133 tRNA synthetases class I (I, L, M and V) XDD1_RS03110 PF08264 Anticodon-binding domain of tRNA XDD1_RS03125 PF13358 DDE superfamily endonuclease XDD1_RS03125 PF13592 Winged helix-turn helix XDD1_RS03140 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family XDD1_RS03145 PF01810 LysE type translocator XDD1_RS03150 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS03155 PF07690 Major Facilitator Superfamily XDD1_RS03160 PF13358 DDE superfamily endonuclease XDD1_RS03170 PF13744 Helix-turn-helix domain XDD1_RS03180 PF01139 tRNA-splicing ligase RtcB XDD1_RS03195 PF00753 Metallo-beta-lactamase superfamily XDD1_RS03200 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS03205 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XDD1_RS03205 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XDD1_RS03230 PF00005 ABC transporter XDD1_RS03230 PF12848 ABC transporter XDD1_RS03235 PF13416 Bacterial extracellular solute-binding protein XDD1_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS03245 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS03250 PF00005 ABC transporter XDD1_RS03250 PF08402 TOBE domain XDD1_RS03255 PF01906 Putative heavy-metal-binding XDD1_RS03260 PF00145 C-5 cytosine-specific DNA methylase XDD1_RS03270 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS03270 PF13755 Sensor N-terminal transmembrane domain XDD1_RS03270 PF00672 HAMP domain XDD1_RS03270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS03270 PF13756 Stimulus-sensing domain XDD1_RS03275 PF03852 DNA mismatch endonuclease Vsr XDD1_RS03290 PF01381 Helix-turn-helix XDD1_RS03295 PF01177 Asp/Glu/Hydantoin racemase XDD1_RS03300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS03300 PF03466 LysR substrate binding domain XDD1_RS03305 PF00375 Sodium:dicarboxylate symporter family XDD1_RS03320 PF13358 DDE superfamily endonuclease XDD1_RS03325 PF12102 Domain of unknown function (DUF3578) XDD1_RS03325 PF07728 AAA domain (dynein-related subfamily) XDD1_RS03345 PF08468 Methyltransferase small domain N-terminal XDD1_RS03345 PF05175 Methyltransferase small domain XDD1_RS03350 PF03603 DNA polymerase III psi subunit XDD1_RS03355 PF00583 Acetyltransferase (GNAT) family XDD1_RS03360 PF01381 Helix-turn-helix XDD1_RS03365 PF13657 HipA N-terminal domain XDD1_RS03365 PF07804 HipA-like C-terminal domain XDD1_RS03370 PF16658 Class II release factor RF3, C-terminal domain XDD1_RS03370 PF00009 Elongation factor Tu GTP binding domain XDD1_RS03370 PF03144 Elongation factor Tu domain 2 XDD1_RS03380 PF01734 Patatin-like phospholipase XDD1_RS03385 PF01026 TatD related DNase XDD1_RS03390 PF01773 Na+ dependent nucleoside transporter N-terminus XDD1_RS03390 PF07662 Na+ dependent nucleoside transporter C-terminus XDD1_RS03390 PF07670 Nucleoside recognition XDD1_RS03395 PF01791 DeoC/LacD family aldolase XDD1_RS03400 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain XDD1_RS03400 PF02885 Glycosyl transferase family, helical bundle domain XDD1_RS03400 PF00591 Glycosyl transferase family, a/b domain XDD1_RS03405 PF01676 Metalloenzyme superfamily XDD1_RS03410 PF01048 Phosphorylase superfamily XDD1_RS03415 PF00419 Fimbrial protein XDD1_RS03420 PF00577 Outer membrane usher protein XDD1_RS03420 PF13953 PapC C-terminal domain XDD1_RS03420 PF13954 PapC N-terminal domain XDD1_RS03425 PF02753 Pili assembly chaperone PapD, C-terminal domain XDD1_RS03425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XDD1_RS03440 PF01381 Helix-turn-helix XDD1_RS03450 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XDD1_RS03450 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XDD1_RS03450 PF02142 MGS-like domain XDD1_RS03455 PF00117 Glutamine amidotransferase class-I XDD1_RS03455 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XDD1_RS03460 PF05173 Dihydrodipicolinate reductase, C-terminus XDD1_RS03460 PF01113 Dihydrodipicolinate reductase, N-terminus XDD1_RS03465 PF03466 LysR substrate binding domain XDD1_RS03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS03485 PF02401 LytB protein XDD1_RS03490 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XDD1_RS03495 PF01252 Signal peptidase (SPase) II XDD1_RS03500 PF08264 Anticodon-binding domain of tRNA XDD1_RS03500 PF06827 Zinc finger found in FPG and IleRS XDD1_RS03500 PF00133 tRNA synthetases class I (I, L, M and V) XDD1_RS03505 PF01687 Riboflavin kinase XDD1_RS03505 PF06574 FAD synthetase XDD1_RS03510 PF01649 Ribosomal protein S20 XDD1_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS03515 PF03466 LysR substrate binding domain XDD1_RS03520 PF06965 Na+/H+ antiporter 1 XDD1_RS03530 PF00684 DnaJ central domain XDD1_RS03530 PF00226 DnaJ domain XDD1_RS03530 PF01556 DnaJ C terminal domain XDD1_RS03535 PF00012 Hsp70 protein XDD1_RS03540 PF01184 GPR1/FUN34/yaaH family XDD1_RS03545 PF08946 Osmosensory transporter coiled coil XDD1_RS03545 PF00083 Sugar (and other) transporter XDD1_RS03555 PF00149 Calcineurin-like phosphoesterase XDD1_RS03570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XDD1_RS03570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XDD1_RS03570 PF02770 Acyl-CoA dehydrogenase, middle domain XDD1_RS03580 PF05199 GMC oxidoreductase XDD1_RS03580 PF00732 GMC oxidoreductase XDD1_RS03585 PF00668 Condensation domain XDD1_RS03585 PF00501 AMP-binding enzyme XDD1_RS03585 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS03585 PF00550 Phosphopantetheine attachment site XDD1_RS03590 PF07690 Major Facilitator Superfamily XDD1_RS03605 PF00994 Probable molybdopterin binding domain XDD1_RS03610 PF00923 Transaldolase/Fructose-6-phosphate aldolase XDD1_RS03615 PF03883 Peroxide stress protein YaaA XDD1_RS03620 PF14821 Threonine synthase N terminus XDD1_RS03620 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS03625 PF00288 GHMP kinases N terminal domain XDD1_RS03625 PF08544 GHMP kinases C terminal XDD1_RS03630 PF13840 ACT domain XDD1_RS03630 PF00696 Amino acid kinase family XDD1_RS03630 PF03447 Homoserine dehydrogenase, NAD binding domain XDD1_RS03630 PF01842 ACT domain XDD1_RS03630 PF00742 Homoserine dehydrogenase XDD1_RS03635 PF00072 Response regulator receiver domain XDD1_RS03635 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS03640 PF05981 CreA protein XDD1_RS03645 PF06445 GyrI-like small molecule binding domain XDD1_RS03645 PF12833 Helix-turn-helix domain XDD1_RS03650 PF00300 Histidine phosphatase superfamily (branch 1) XDD1_RS03655 PF01931 Protein of unknown function DUF84 XDD1_RS03660 PF01371 Trp repressor protein XDD1_RS03665 PF01464 Transglycosylase SLT domain XDD1_RS03665 PF14718 Soluble lytic murein transglycosylase L domain XDD1_RS03670 PF00005 ABC transporter XDD1_RS03670 PF12848 ABC transporter XDD1_RS03675 PF00005 ABC transporter XDD1_RS03680 PF13521 AAA domain XDD1_RS03680 PF01381 Helix-turn-helix XDD1_RS03685 PF18073 Rubredoxin metal binding domain XDD1_RS03690 PF18429 Domain of unknown function (DUF5609) XDD1_RS03695 PF10144 Bacterial virulence factor haemolysin XDD1_RS03705 PF00248 Aldo/keto reductase family XDD1_RS03710 PF09335 SNARE associated Golgi protein XDD1_RS03715 PF01053 Cys/Met metabolism PLP-dependent enzyme XDD1_RS03720 PF01618 MotA/TolQ/ExbB proton channel family XDD1_RS03725 PF02472 Biopolymer transport protein ExbD/TolR XDD1_RS03740 PF00381 PTS HPr component phosphorylation site XDD1_RS03745 PF00232 Glycosyl hydrolase family 1 XDD1_RS03755 PF02378 Phosphotransferase system, EIIC XDD1_RS03760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit XDD1_RS03780 PF00267 Gram-negative porin XDD1_RS03785 PF04381 Putative exonuclease, RdgC XDD1_RS03790 PF00480 ROK family XDD1_RS03795 PF00149 Calcineurin-like phosphoesterase XDD1_RS03795 PF02872 5'-nucleotidase, C-terminal domain XDD1_RS03800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS03805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS03810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS03820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS03835 PF13476 AAA domain XDD1_RS03840 PF00149 Calcineurin-like phosphoesterase XDD1_RS03840 PF12320 Type 5 capsule protein repressor C-terminal domain XDD1_RS03845 PF00072 Response regulator receiver domain XDD1_RS03845 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS03850 PF00989 PAS fold XDD1_RS03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS03850 PF11808 Phosphate regulon sensor protein PhoR XDD1_RS03850 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS03855 PF05525 Branched-chain amino acid transport protein XDD1_RS03860 PF00209 Sodium:neurotransmitter symporter family XDD1_RS03870 PF00578 AhpC/TSA family XDD1_RS03870 PF10417 C-terminal domain of 1-Cys peroxiredoxin XDD1_RS03875 PF04336 Acyl carrier protein phosphodiesterase XDD1_RS03880 PF02547 Queuosine biosynthesis protein XDD1_RS03885 PF01702 Queuine tRNA-ribosyltransferase XDD1_RS03890 PF02699 Preprotein translocase subunit XDD1_RS03895 PF07549 SecD/SecF GG Motif XDD1_RS03895 PF13721 SecD export protein N-terminal TM region XDD1_RS03895 PF02355 Protein export membrane protein XDD1_RS03900 PF02355 Protein export membrane protein XDD1_RS03900 PF07549 SecD/SecF GG Motif XDD1_RS03905 PF03477 ATP cone domain XDD1_RS03910 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XDD1_RS03910 PF01872 RibD C-terminal domain XDD1_RS03915 PF00885 6,7-dimethyl-8-ribityllumazine synthase XDD1_RS03920 PF01029 NusB family XDD1_RS03925 PF00586 AIR synthase related protein, N-terminal domain XDD1_RS03925 PF02769 AIR synthase related protein, C-terminal domain XDD1_RS03930 PF04608 Phosphatidylglycerophosphatase A XDD1_RS03935 PF01470 Pyroglutamyl peptidase XDD1_RS03955 PF00155 Aminotransferase class I and II XDD1_RS03960 PF03553 Na+/H+ antiporter family XDD1_RS03965 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS03995 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XDD1_RS03995 PF02779 Transketolase, pyrimidine binding domain XDD1_RS03995 PF02780 Transketolase, C-terminal domain XDD1_RS04000 PF00348 Polyprenyl synthetase XDD1_RS04005 PF02609 Exonuclease VII small subunit XDD1_RS04010 PF02568 Thiamine biosynthesis protein (ThiI) XDD1_RS04010 PF02926 THUMP domain XDD1_RS04015 PF02558 Ketopantoate reductase PanE/ApbA XDD1_RS04015 PF08546 Ketopantoate reductase PanE/ApbA C terminal XDD1_RS04020 PF04461 Protein of unknown function (DUF520) XDD1_RS04025 PF07690 Major Facilitator Superfamily XDD1_RS04030 PF01040 UbiA prenyltransferase family XDD1_RS04035 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XDD1_RS04040 PF00510 Cytochrome c oxidase subunit III XDD1_RS04045 PF00115 Cytochrome C and Quinol oxidase polypeptide I XDD1_RS04050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XDD1_RS04050 PF06481 COX Aromatic Rich Motif XDD1_RS04055 PF03502 Nucleoside-specific channel-forming protein, Tsx XDD1_RS04060 PF07690 Major Facilitator Superfamily XDD1_RS04065 PF08139 Prokaryotic membrane lipoprotein lipid attachment site XDD1_RS04065 PF03923 Uncharacterized lipoprotein XDD1_RS04070 PF01722 BolA-like protein XDD1_RS04075 PF05697 Bacterial trigger factor protein (TF) XDD1_RS04075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XDD1_RS04075 PF05698 Bacterial trigger factor protein (TF) C-terminus XDD1_RS04080 PF00574 Clp protease XDD1_RS04085 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS04085 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS04085 PF06689 ClpX C4-type zinc finger XDD1_RS04090 PF02190 ATP-dependent protease La (LON) substrate-binding domain XDD1_RS04090 PF05362 Lon protease (S16) C-terminal proteolytic domain XDD1_RS04090 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS04095 PF00216 Bacterial DNA-binding protein XDD1_RS04100 PF13145 PPIC-type PPIASE domain XDD1_RS04115 PF06508 Queuosine biosynthesis protein QueC XDD1_RS04125 PF13404 AsnC-type helix-turn-helix domain XDD1_RS04125 PF01037 Lrp/AsnC ligand binding domain XDD1_RS04130 PF00664 ABC transporter transmembrane region XDD1_RS04130 PF00005 ABC transporter XDD1_RS04135 PF00664 ABC transporter transmembrane region XDD1_RS04135 PF00005 ABC transporter XDD1_RS04140 PF00543 Nitrogen regulatory protein P-II XDD1_RS04145 PF00909 Ammonium Transporter Family XDD1_RS04160 PF05321 Haemolysin expression modulating protein XDD1_RS04165 PF10757 Biofilm formation regulator YbaJ XDD1_RS04170 PF00873 AcrB/AcrD/AcrF family XDD1_RS04175 PF00529 HlyD membrane-fusion protein of T1SS XDD1_RS04175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS04180 PF08361 MAATS-type transcriptional repressor, C-terminal region XDD1_RS04180 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS04185 PF12795 Mechanosensitive ion channel porin domain XDD1_RS04185 PF12794 Mechanosensitive ion channel inner membrane domain 1 XDD1_RS04185 PF00924 Mechanosensitive ion channel XDD1_RS04195 PF00156 Phosphoribosyl transferase domain XDD1_RS04200 PF12170 DNA polymerase III tau subunit V interacting with alpha XDD1_RS04200 PF12169 DNA polymerase III subunits gamma and tau domain III XDD1_RS04200 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XDD1_RS04205 PF02575 YbaB/EbfC DNA-binding family XDD1_RS04210 PF02132 RecR protein XDD1_RS04210 PF13662 Toprim domain XDD1_RS04215 PF00183 Hsp90 protein XDD1_RS04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS04220 PF05191 Adenylate kinase, active site lid XDD1_RS04225 PF00762 Ferrochelatase XDD1_RS04230 PF02706 Chain length determinant protein XDD1_RS04235 PF00294 pfkB family carbohydrate kinase XDD1_RS04240 PF00999 Sodium/hydrogen exchanger family XDD1_RS04240 PF02254 TrkA-N domain XDD1_RS04245 PF07690 Major Facilitator Superfamily XDD1_RS04250 PF00149 Calcineurin-like phosphoesterase XDD1_RS04250 PF02872 5'-nucleotidase, C-terminal domain XDD1_RS04260 PF04073 Aminoacyl-tRNA editing domain XDD1_RS04265 PF01963 TraB family XDD1_RS04270 PF00403 Heavy-metal-associated domain XDD1_RS04275 PF13411 MerR HTH family regulatory protein XDD1_RS04280 PF01957 NfeD-like C-terminal, partner-binding XDD1_RS04285 PF16200 C-terminal region of band_7 XDD1_RS04285 PF01145 SPFH domain / Band 7 family XDD1_RS04290 PF00085 Thioredoxin XDD1_RS04295 PF00106 short chain dehydrogenase XDD1_RS04300 PF13472 GDSL-like Lipase/Acylhydrolase family XDD1_RS04305 PF00005 ABC transporter XDD1_RS04320 PF00677 Lumazine binding domain XDD1_RS04335 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS04345 PF05373 L-proline 3-hydroxylase, C-terminal XDD1_RS04345 PF05118 Aspartyl/Asparaginyl beta-hydroxylase XDD1_RS04350 PF02222 ATP-grasp domain XDD1_RS04350 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XDD1_RS04355 PF00731 AIR carboxylase XDD1_RS04360 PF00149 Calcineurin-like phosphoesterase XDD1_RS04365 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XDD1_RS04380 PF01406 tRNA synthetases class I (C) catalytic domain XDD1_RS04380 PF09190 DALR domain XDD1_RS04390 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XDD1_RS04390 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XDD1_RS04445 PF05973 Phage derived protein Gp49-like (DUF891) XDD1_RS04450 PF01381 Helix-turn-helix XDD1_RS04465 PF03527 RHS protein XDD1_RS04465 PF05593 RHS Repeat XDD1_RS04500 PF05593 RHS Repeat XDD1_RS04500 PF03527 RHS protein XDD1_RS04515 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS04530 PF00753 Metallo-beta-lactamase superfamily XDD1_RS04545 PF01464 Transglycosylase SLT domain XDD1_RS04545 PF01476 LysM domain XDD1_RS04550 PF00753 Metallo-beta-lactamase superfamily XDD1_RS04550 PF16123 Hydroxyacylglutathione hydrolase C-terminus XDD1_RS04555 PF08241 Methyltransferase domain XDD1_RS04560 PF00075 RNase H XDD1_RS04565 PF00929 Exonuclease XDD1_RS04585 PF00456 Transketolase, thiamine diphosphate binding domain XDD1_RS04585 PF02780 Transketolase, C-terminal domain XDD1_RS04585 PF02779 Transketolase, pyrimidine binding domain XDD1_RS04590 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XDD1_RS04590 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XDD1_RS04595 PF00162 Phosphoglycerate kinase XDD1_RS04600 PF01116 Fructose-bisphosphate aldolase class-II XDD1_RS04610 PF00854 POT family XDD1_RS04625 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XDD1_RS04625 PF01243 Pyridoxamine 5'-phosphate oxidase XDD1_RS04630 PF00162 Phosphoglycerate kinase XDD1_RS04635 PF00202 Aminotransferase class-III XDD1_RS04660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XDD1_RS04660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XDD1_RS04665 PF02774 Semialdehyde dehydrogenase, dimerisation domain XDD1_RS04665 PF01118 Semialdehyde dehydrogenase, NAD binding domain XDD1_RS04670 PF13592 Winged helix-turn helix XDD1_RS04670 PF13358 DDE superfamily endonuclease XDD1_RS04675 PF02774 Semialdehyde dehydrogenase, dimerisation domain XDD1_RS04675 PF01118 Semialdehyde dehydrogenase, NAD binding domain XDD1_RS04680 PF00107 Zinc-binding dehydrogenase XDD1_RS04680 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS04685 PF00465 Iron-containing alcohol dehydrogenase XDD1_RS04690 PF01613 Flavin reductase like domain XDD1_RS04695 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal XDD1_RS04695 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal XDD1_RS04710 PF12833 Helix-turn-helix domain XDD1_RS04710 PF02311 AraC-like ligand binding domain XDD1_RS04715 PF07690 Major Facilitator Superfamily XDD1_RS04720 PF03328 HpcH/HpaI aldolase/citrate lyase family XDD1_RS04725 PF01557 Fumarylacetoacetate (FAA) hydrolase family XDD1_RS04730 PF00171 Aldehyde dehydrogenase family XDD1_RS04735 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase XDD1_RS04740 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XDD1_RS04745 PF00171 Aldehyde dehydrogenase family XDD1_RS04750 PF01557 Fumarylacetoacetate (FAA) hydrolase family XDD1_RS04755 PF01557 Fumarylacetoacetate (FAA) hydrolase family XDD1_RS04760 PF01047 MarR family XDD1_RS04765 PF13823 Alcohol dehydrogenase GroES-associated XDD1_RS04765 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS04765 PF00107 Zinc-binding dehydrogenase XDD1_RS04775 PF00550 Phosphopantetheine attachment site XDD1_RS04775 PF00668 Condensation domain XDD1_RS04775 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS04775 PF00501 AMP-binding enzyme XDD1_RS04795 PF00171 Aldehyde dehydrogenase family XDD1_RS04800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XDD1_RS04800 PF00205 Thiamine pyrophosphate enzyme, central domain XDD1_RS04800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XDD1_RS04805 PF00144 Beta-lactamase XDD1_RS04810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XDD1_RS04810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XDD1_RS04815 PF00474 Sodium:solute symporter family XDD1_RS04820 PF00294 pfkB family carbohydrate kinase XDD1_RS04825 PF01261 Xylose isomerase-like TIM barrel XDD1_RS04830 PF04962 KduI/IolB family XDD1_RS04845 PF00583 Acetyltransferase (GNAT) family XDD1_RS04850 PF01965 DJ-1/PfpI family XDD1_RS04850 PF12833 Helix-turn-helix domain XDD1_RS04860 PF00857 Isochorismatase family XDD1_RS04875 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS04880 PF00561 alpha/beta hydrolase fold XDD1_RS04885 PF00892 EamA-like transporter family XDD1_RS04930 PF00772 DnaB-like helicase N terminal domain XDD1_RS04930 PF03796 DnaB-like helicase C terminal domain XDD1_RS04960 PF01751 Toprim domain XDD1_RS04960 PF01131 DNA topoisomerase XDD1_RS04975 PF00436 Single-strand binding protein family XDD1_RS04985 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS05080 PF02369 Bacterial Ig-like domain (group 1) XDD1_RS05080 PF11924 Inverse autotransporter, beta-domain XDD1_RS05080 PF09134 Invasin, domain 3 XDD1_RS05085 PF00294 pfkB family carbohydrate kinase XDD1_RS05090 PF01209 ubiE/COQ5 methyltransferase family XDD1_RS05130 PF05593 RHS Repeat XDD1_RS05130 PF05488 PAAR motif XDD1_RS05140 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS05155 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XDD1_RS05155 PF08479 POTRA domain, ShlB-type XDD1_RS05155 PF17287 POTRA domain XDD1_RS05160 PF02794 RTX toxin acyltransferase family XDD1_RS05165 PF04829 Pre-toxin domain with VENN motif XDD1_RS05165 PF13332 Hemagglutinin repeat XDD1_RS05165 PF05594 Haemagluttinin repeat XDD1_RS05210 PF06755 CbtA_toxin of type IV toxin-antitoxin system XDD1_RS05230 PF00589 Phage integrase family XDD1_RS05240 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain XDD1_RS05240 PF01464 Transglycosylase SLT domain XDD1_RS05245 PF04362 Bacterial Fe(2+) trafficking XDD1_RS05250 PF10576 Iron-sulfur binding domain of endonuclease III XDD1_RS05250 PF00633 Helix-hairpin-helix motif XDD1_RS05250 PF00730 HhH-GPD superfamily base excision DNA repair protein XDD1_RS05250 PF14815 NUDIX domain XDD1_RS05255 PF02390 Putative methyltransferase XDD1_RS05260 PF04320 Protein with unknown function (DUF469) XDD1_RS05265 PF04960 Glutaminase XDD1_RS05270 PF11101 Protein of unknown function (DUF2884) XDD1_RS05275 PF01497 Periplasmic binding protein XDD1_RS05285 PF01161 Phosphatidylethanolamine-binding protein XDD1_RS05295 PF03466 LysR substrate binding domain XDD1_RS05295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS05300 PF00330 Aconitase family (aconitate hydratase) XDD1_RS05305 PF00694 Aconitase C-terminal domain XDD1_RS05330 PF04055 Radical SAM superfamily XDD1_RS05330 PF06969 HemN C-terminal domain XDD1_RS05335 PF01725 Ham1 family XDD1_RS05340 PF02325 YGGT family XDD1_RS05345 PF14748 Pyrroline-5-carboxylate reductase dimerisation XDD1_RS05345 PF03807 NADP oxidoreductase coenzyme F420-dependent XDD1_RS05350 PF01168 Alanine racemase, N-terminal domain XDD1_RS05355 PF00437 Type II/IV secretion system protein XDD1_RS05360 PF03652 Holliday junction resolvase XDD1_RS05365 PF02622 Uncharacterized ACR, COG1678 XDD1_RS05370 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XDD1_RS05370 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XDD1_RS05375 PF04452 RNA methyltransferase XDD1_RS05380 PF06750 Bacterial Peptidase A24 N-terminal domain XDD1_RS05380 PF01478 Type IV leader peptidase family XDD1_RS05390 PF03466 LysR substrate binding domain XDD1_RS05390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS05395 PF03466 LysR substrate binding domain XDD1_RS05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS05400 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XDD1_RS05400 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XDD1_RS05405 PF09317 Domain of unknown function (DUF1974) XDD1_RS05405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XDD1_RS05405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XDD1_RS05410 PF13580 SIS domain XDD1_RS05415 PF13230 Glutamine amidotransferases class-II XDD1_RS05420 PF03734 L,D-transpeptidase catalytic domain XDD1_RS05425 PF11973 NQRA C-terminal domain XDD1_RS05425 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) XDD1_RS05430 PF03116 NQR2, RnfD, RnfE family XDD1_RS05435 PF04205 FMN-binding domain XDD1_RS05440 PF02508 Rnf-Nqr subunit, membrane protein XDD1_RS05445 PF02508 Rnf-Nqr subunit, membrane protein XDD1_RS05450 PF00970 Oxidoreductase FAD-binding domain XDD1_RS05450 PF00111 2Fe-2S iron-sulfur cluster binding domain XDD1_RS05450 PF00175 Oxidoreductase NAD-binding domain XDD1_RS05455 PF02424 ApbE family XDD1_RS05460 PF04400 (Na+)-NQR maturation NqrM XDD1_RS05465 PF04542 Sigma-70 region 2 XDD1_RS05465 PF08281 Sigma-70, region 4 XDD1_RS05470 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS05470 PF00593 TonB dependent receptor XDD1_RS05480 PF00732 GMC oxidoreductase XDD1_RS05480 PF05199 GMC oxidoreductase XDD1_RS05485 PF00171 Aldehyde dehydrogenase family XDD1_RS05490 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS05490 PF13977 BetI-type transcriptional repressor, C-terminal XDD1_RS05495 PF02028 BCCT, betaine/carnitine/choline family transporter XDD1_RS05500 PF07690 Major Facilitator Superfamily XDD1_RS05505 PF00817 impB/mucB/samB family XDD1_RS05505 PF11799 impB/mucB/samB family C-terminal domain XDD1_RS05505 PF11798 IMS family HHH motif XDD1_RS05510 PF01546 Peptidase family M20/M25/M40 XDD1_RS05510 PF07687 Peptidase dimerisation domain XDD1_RS05515 PF00156 Phosphoribosyl transferase domain XDD1_RS05520 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) XDD1_RS05525 PF07417 Sigma factor-binding transcriptional regulator Crl XDD1_RS05530 PF01472 PUA domain XDD1_RS05530 PF00696 Amino acid kinase family XDD1_RS05535 PF00171 Aldehyde dehydrogenase family XDD1_RS05545 PF01202 Shikimate kinase XDD1_RS05550 PF01553 Acyltransferase XDD1_RS05550 PF00501 AMP-binding enzyme XDD1_RS05550 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS05555 PF07690 Major Facilitator Superfamily XDD1_RS05560 PF02464 Competence-damaged protein XDD1_RS05565 PF00154 recA bacterial DNA recombination protein XDD1_RS05570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XDD1_RS05570 PF01411 tRNA synthetases class II (A) XDD1_RS05570 PF02272 DHHA1 domain XDD1_RS05575 PF02599 Global regulator protein family XDD1_RS05595 PF04262 Glutamate-cysteine ligase XDD1_RS05600 PF02664 S-Ribosylhomocysteinase (LuxS) XDD1_RS05605 PF03471 Transporter associated domain XDD1_RS05605 PF00571 CBS domain XDD1_RS05605 PF01595 Cyclin M transmembrane N-terminal domain XDD1_RS05610 PF01578 Cytochrome C assembly protein XDD1_RS05615 PF02978 Signal peptide binding domain XDD1_RS05615 PF02881 SRP54-type protein, helical bundle domain XDD1_RS05615 PF00448 SRP54-type protein, GTPase domain XDD1_RS05620 PF00886 Ribosomal protein S16 XDD1_RS05625 PF01782 RimM N-terminal domain XDD1_RS05625 PF05239 PRC-barrel domain XDD1_RS05630 PF01746 tRNA (Guanine-1)-methyltransferase XDD1_RS05635 PF01245 Ribosomal protein L19 XDD1_RS05640 PF14698 Argininosuccinate lyase C-terminal XDD1_RS05640 PF00206 Lyase XDD1_RS05645 PF07690 Major Facilitator Superfamily XDD1_RS05660 PF00793 DAHP synthetase I family XDD1_RS05665 PF01817 Chorismate mutase type II XDD1_RS05665 PF02153 Prephenate dehydrogenase XDD1_RS05670 PF01817 Chorismate mutase type II XDD1_RS05670 PF00800 Prephenate dehydratase XDD1_RS05675 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XDD1_RS05680 PF13525 Outer membrane lipoprotein XDD1_RS05685 PF01479 S4 domain XDD1_RS05685 PF00849 RNA pseudouridylate synthase XDD1_RS05690 PF02578 Multi-copper polyphenol oxidoreductase laccase XDD1_RS05695 PF02861 Clp amino terminal domain, pathogenicity island component XDD1_RS05695 PF17871 AAA lid domain XDD1_RS05695 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS05695 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS05695 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS05720 PF10043 Predicted periplasmic lipoprotein (DUF2279) XDD1_RS05725 PF13091 PLD-like domain XDD1_RS05730 PF13380 CoA binding domain XDD1_RS05730 PF13607 Succinyl-CoA ligase like flavodoxin domain XDD1_RS05730 PF00583 Acetyltransferase (GNAT) family XDD1_RS05735 PF03942 DTW domain XDD1_RS05740 PF08032 RNA 2'-O ribose methyltransferase substrate binding XDD1_RS05740 PF00588 SpoU rRNA Methylase family XDD1_RS05745 PF04183 IucA / IucC family XDD1_RS05745 PF06276 Ferric iron reductase FhuF-like transporter XDD1_RS05750 PF00593 TonB dependent receptor XDD1_RS05750 PF07660 Secretin and TonB N terminus short domain XDD1_RS05750 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS05755 PF01497 Periplasmic binding protein XDD1_RS05760 PF01032 FecCD transport family XDD1_RS05765 PF01032 FecCD transport family XDD1_RS05770 PF00005 ABC transporter XDD1_RS05775 PF11575 FhuF 2Fe-2S C-terminal domain XDD1_RS05775 PF06276 Ferric iron reductase FhuF-like transporter XDD1_RS05780 PF00282 Pyridoxal-dependent decarboxylase conserved domain XDD1_RS05785 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) XDD1_RS05790 PF04183 IucA / IucC family XDD1_RS05790 PF06276 Ferric iron reductase FhuF-like transporter XDD1_RS05795 PF07690 Major Facilitator Superfamily XDD1_RS05800 PF00529 HlyD membrane-fusion protein of T1SS XDD1_RS05800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS05805 PF01047 MarR family XDD1_RS05810 PF05437 Branched-chain amino acid transport protein (AzlD) XDD1_RS05815 PF03591 AzlC protein XDD1_RS05820 PF04069 Substrate binding domain of ABC-type glycine betaine transport system XDD1_RS05825 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS05830 PF00005 ABC transporter XDD1_RS05830 PF00571 CBS domain XDD1_RS05840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XDD1_RS05840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XDD1_RS05845 PF00313 'Cold-shock' DNA-binding domain XDD1_RS05850 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XDD1_RS05855 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XDD1_RS05855 PF04055 Radical SAM superfamily XDD1_RS05870 PF02386 Cation transport protein XDD1_RS05875 PF04359 Protein of unknown function (DUF493) XDD1_RS05880 PF00768 D-alanyl-D-alanine carboxypeptidase XDD1_RS05880 PF07943 Penicillin-binding protein 5, C-terminal domain XDD1_RS05890 PF01098 Cell cycle protein XDD1_RS05895 PF03717 Penicillin-binding Protein dimerisation domain XDD1_RS05895 PF00905 Penicillin binding protein transpeptidase domain XDD1_RS05900 PF02590 Predicted SPOUT methyltransferase XDD1_RS05910 PF01467 Cytidylyltransferase-like XDD1_RS05915 PF14840 Processivity clamp loader gamma complex DNA pol III C-term XDD1_RS05915 PF06144 DNA polymerase III, delta subunit XDD1_RS05920 PF04390 Lipopolysaccharide-assembly XDD1_RS05925 PF13603 Leucyl-tRNA synthetase, Domain 2 XDD1_RS05925 PF00133 tRNA synthetases class I (I, L, M and V) XDD1_RS05925 PF08264 Anticodon-binding domain of tRNA XDD1_RS05930 PF00005 ABC transporter XDD1_RS05935 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS05940 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS05945 PF00497 Bacterial extracellular solute-binding proteins, family 3 XDD1_RS05960 PF02675 S-adenosylmethionine decarboxylase XDD1_RS05975 PF00795 Carbon-nitrogen hydrolase XDD1_RS05980 PF03471 Transporter associated domain XDD1_RS05980 PF00571 CBS domain XDD1_RS05985 PF02130 Uncharacterized protein family UPF0054 XDD1_RS05990 PF02562 PhoH-like protein XDD1_RS05995 PF01938 TRAM domain XDD1_RS05995 PF00919 Uncharacterized protein family UPF0004 XDD1_RS05995 PF04055 Radical SAM superfamily XDD1_RS06000 PF01494 FAD binding domain XDD1_RS06010 PF12441 CopG antitoxin of type II toxin-antitoxin system XDD1_RS06040 PF00480 ROK family XDD1_RS06040 PF01047 MarR family XDD1_RS06045 PF01979 Amidohydrolase family XDD1_RS06050 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XDD1_RS06055 PF00367 phosphotransferase system, EIIB XDD1_RS06055 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XDD1_RS06055 PF02378 Phosphotransferase system, EIIC XDD1_RS06060 PF00749 tRNA synthetases class I (E and Q), catalytic domain XDD1_RS06060 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XDD1_RS06065 PF02838 Glycosyl hydrolase family 20, domain 2 XDD1_RS06065 PF00728 Glycosyl hydrolase family 20, catalytic domain XDD1_RS06065 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain XDD1_RS06065 PF03173 Putative carbohydrate binding domain XDD1_RS06070 PF01475 Ferric uptake regulator family XDD1_RS06075 PF00258 Flavodoxin XDD1_RS06080 PF01402 Ribbon-helix-helix protein, copG family XDD1_RS06095 PF12833 Helix-turn-helix domain XDD1_RS06095 PF07883 Cupin domain XDD1_RS06100 PF00664 ABC transporter transmembrane region XDD1_RS06100 PF00005 ABC transporter XDD1_RS06100 PF03412 Peptidase C39 family XDD1_RS06110 PF00005 ABC transporter XDD1_RS06110 PF03412 Peptidase C39 family XDD1_RS06110 PF00664 ABC transporter transmembrane region XDD1_RS06125 PF02794 RTX toxin acyltransferase family XDD1_RS06130 PF07634 RtxA repeat XDD1_RS06130 PF11647 Membrane Localization Domain XDD1_RS06130 PF12146 Serine aminopeptidase, S33 XDD1_RS06130 PF16671 Actin cross-linking domain XDD1_RS06130 PF11713 Peptidase C80 family XDD1_RS06145 PF08241 Methyltransferase domain XDD1_RS06150 PF00459 Inositol monophosphatase family XDD1_RS06160 PF00891 O-methyltransferase domain XDD1_RS06165 PF08241 Methyltransferase domain XDD1_RS06170 PF12697 Alpha/beta hydrolase family XDD1_RS06175 PF03925 SeqA protein C-terminal domain XDD1_RS06175 PF17206 SeqA protein N-terminal domain XDD1_RS06180 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XDD1_RS06180 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XDD1_RS06180 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XDD1_RS06180 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XDD1_RS06190 PF03714 Bacterial pullanase-associated domain XDD1_RS06190 PF11852 Domain of unknown function (DUF3372) XDD1_RS06190 PF18494 Pullulanase Ins domain XDD1_RS06190 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) XDD1_RS06190 PF17967 Pullulanase N2 domain XDD1_RS06195 PF13493 Domain of unknown function (DUF4118) XDD1_RS06195 PF13492 GAF domain XDD1_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS06195 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS06195 PF02702 Osmosensitive K+ channel His kinase sensor domain XDD1_RS06200 PF02669 K+-transporting ATPase, c chain XDD1_RS06210 PF03814 Potassium-transporting ATPase A subunit XDD1_RS06215 PF10725 Protein of unknown function (DUF2517) XDD1_RS06220 PF01784 NIF3 (NGG1p interacting factor 3) XDD1_RS06225 PF07690 Major Facilitator Superfamily XDD1_RS06235 PF00285 Citrate synthase, C-terminal domain XDD1_RS06240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XDD1_RS06245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XDD1_RS06250 PF02910 Fumarate reductase flavoprotein C-term XDD1_RS06250 PF00890 FAD binding domain XDD1_RS06255 PF13085 2Fe-2S iron-sulfur cluster binding domain XDD1_RS06260 PF00676 Dehydrogenase E1 component XDD1_RS06260 PF16870 2-oxoglutarate dehydrogenase C-terminal XDD1_RS06260 PF02779 Transketolase, pyrimidine binding domain XDD1_RS06260 PF16078 2-oxoglutarate dehydrogenase N-terminus XDD1_RS06265 PF02817 e3 binding domain XDD1_RS06265 PF00364 Biotin-requiring enzyme XDD1_RS06265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XDD1_RS06270 PF08442 ATP-grasp domain XDD1_RS06270 PF00549 CoA-ligase XDD1_RS06275 PF02629 CoA binding domain XDD1_RS06275 PF00549 CoA-ligase XDD1_RS06280 PF01654 Cytochrome bd terminal oxidase subunit I XDD1_RS06285 PF02322 Cytochrome bd terminal oxidase subunit II XDD1_RS06290 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) XDD1_RS06295 PF03061 Thioesterase superfamily XDD1_RS06300 PF01618 MotA/TolQ/ExbB proton channel family XDD1_RS06305 PF02472 Biopolymer transport protein ExbD/TolR XDD1_RS06310 PF06519 TolA C-terminal XDD1_RS06315 PF04052 TolB amino-terminal domain XDD1_RS06315 PF07676 WD40-like Beta Propeller Repeat XDD1_RS06320 PF00691 OmpA family XDD1_RS06325 PF16331 TolA binding protein trimerisation XDD1_RS06325 PF13174 Tetratricopeptide repeat XDD1_RS06355 PF04973 Nicotinamide mononucleotide transporter XDD1_RS06360 PF00793 DAHP synthetase I family XDD1_RS06365 PF00300 Histidine phosphatase superfamily (branch 1) XDD1_RS06375 PF00005 ABC transporter XDD1_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS06390 PF03459 TOBE domain XDD1_RS06390 PF00005 ABC transporter XDD1_RS06400 PF10282 Lactonase, 7-bladed beta-propeller XDD1_RS06430 PF03796 DnaB-like helicase C terminal domain XDD1_RS06430 PF00772 DnaB-like helicase N terminal domain XDD1_RS06465 PF01751 Toprim domain XDD1_RS06465 PF01131 DNA topoisomerase XDD1_RS06480 PF00436 Single-strand binding protein family XDD1_RS06490 PF02463 RecF/RecN/SMC N terminal domain XDD1_RS06495 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS06540 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS06560 PF00005 ABC transporter XDD1_RS06565 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS06570 PF09209 Tetracyclin repressor-like, C-terminal domain XDD1_RS06570 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS06580 PF00270 DEAD/DEAH box helicase XDD1_RS06580 PF00271 Helicase conserved C-terminal domain XDD1_RS06585 PF01207 Dihydrouridine synthase (Dus) XDD1_RS06605 PF04226 Transglycosylase associated protein XDD1_RS06610 PF00581 Rhodanese-like domain XDD1_RS06615 PF13307 Helicase C-terminal domain XDD1_RS06615 PF06733 DEAD_2 XDD1_RS06620 PF00005 ABC transporter XDD1_RS06620 PF12848 ABC transporter XDD1_RS06640 PF03831 PhnA domain XDD1_RS06640 PF08274 PhnA Zinc-Ribbon XDD1_RS06645 PF00210 Ferritin-like domain XDD1_RS06650 PF00892 EamA-like transporter family XDD1_RS06660 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XDD1_RS06660 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XDD1_RS06665 PF00005 ABC transporter XDD1_RS06665 PF12848 ABC transporter XDD1_RS06670 PF00899 ThiF family XDD1_RS06675 PF03454 MoeA C-terminal region (domain IV) XDD1_RS06675 PF00994 Probable molybdopterin binding domain XDD1_RS06675 PF03453 MoeA N-terminal region (domain I and II) XDD1_RS06680 PF06779 Uncharacterised MFS-type transporter YbfB XDD1_RS06685 PF01227 GTP cyclohydrolase I XDD1_RS06690 PF04235 Protein of unknown function (DUF418) XDD1_RS06695 PF02698 DUF218 domain XDD1_RS06700 PF03949 Malic enzyme, NAD binding domain XDD1_RS06700 PF00390 Malic enzyme, N-terminal domain XDD1_RS06705 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XDD1_RS06705 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region XDD1_RS06710 PF04172 LrgB-like family XDD1_RS06715 PF03788 LrgA family XDD1_RS06720 PF09334 tRNA synthetases class I (M) XDD1_RS06720 PF01588 Putative tRNA binding domain XDD1_RS06725 PF10609 NUBPL iron-transfer P-loop NTPase XDD1_RS06730 PF00485 Phosphoribulokinase / Uridine kinase family XDD1_RS06735 PF00692 dUTPase XDD1_RS06740 PF05170 AsmA family XDD1_RS06760 PF13358 DDE superfamily endonuclease XDD1_RS06760 PF13592 Winged helix-turn helix XDD1_RS06800 PF13936 Helix-turn-helix domain XDD1_RS06800 PF00665 Integrase core domain XDD1_RS06810 PF01027 Inhibitor of apoptosis-promoting Bax1 XDD1_RS06815 PF02391 MoaE protein XDD1_RS06820 PF02597 ThiS family XDD1_RS06825 PF01967 MoaC family XDD1_RS06830 PF06463 Molybdenum Cofactor Synthesis C XDD1_RS06830 PF04055 Radical SAM superfamily XDD1_RS06835 PF01933 Uncharacterised protein family UPF0052 XDD1_RS06840 PF12344 Ultra-violet resistance protein B XDD1_RS06840 PF00271 Helicase conserved C-terminal domain XDD1_RS06840 PF17757 UvrB interaction domain XDD1_RS06840 PF04851 Type III restriction enzyme, res subunit XDD1_RS06840 PF02151 UvrB/uvrC motif XDD1_RS06850 PF08241 Methyltransferase domain XDD1_RS06855 PF00155 Aminotransferase class I and II XDD1_RS06860 PF04055 Radical SAM superfamily XDD1_RS06860 PF06968 Biotin and Thiamin Synthesis associated domain XDD1_RS06865 PF00202 Aminotransferase class-III XDD1_RS06905 PF03527 RHS protein XDD1_RS06905 PF05593 RHS Repeat XDD1_RS06915 PF08845 Toxin SymE, type I toxin-antitoxin system XDD1_RS06920 PF01381 Helix-turn-helix XDD1_RS06925 PF01807 CHC2 zinc finger XDD1_RS06925 PF10410 DnaB-helicase binding domain of primase XDD1_RS06925 PF08275 DNA primase catalytic core, N-terminal domain XDD1_RS06930 PF13495 Phage integrase, N-terminal SAM-like domain XDD1_RS06930 PF00589 Phage integrase family XDD1_RS06945 PF13358 DDE superfamily endonuclease XDD1_RS06985 PF01209 ubiE/COQ5 methyltransferase family XDD1_RS06990 PF00294 pfkB family carbohydrate kinase XDD1_RS07020 PF00571 CBS domain XDD1_RS07020 PF03471 Transporter associated domain XDD1_RS07020 PF03741 Integral membrane protein TerC family XDD1_RS07025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain XDD1_RS07025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase XDD1_RS07030 PF00465 Iron-containing alcohol dehydrogenase XDD1_RS07035 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XDD1_RS07035 PF01502 Phosphoribosyl-AMP cyclohydrolase XDD1_RS07040 PF00977 Histidine biosynthesis protein XDD1_RS07045 PF00977 Histidine biosynthesis protein XDD1_RS07050 PF00117 Glutamine amidotransferase class-I XDD1_RS07055 PF00475 Imidazoleglycerol-phosphate dehydratase XDD1_RS07060 PF00815 Histidinol dehydrogenase XDD1_RS07060 PF00155 Aminotransferase class I and II XDD1_RS07065 PF00815 Histidinol dehydrogenase XDD1_RS07065 PF00155 Aminotransferase class I and II XDD1_RS07070 PF01634 ATP phosphoribosyltransferase XDD1_RS07070 PF08029 HisG, C-terminal domain XDD1_RS07075 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS07080 PF13417 Glutathione S-transferase, N-terminal domain XDD1_RS07080 PF00043 Glutathione S-transferase, C-terminal domain XDD1_RS07085 PF07943 Penicillin-binding protein 5, C-terminal domain XDD1_RS07085 PF00768 D-alanyl-D-alanine carboxypeptidase XDD1_RS07095 PF01569 PAP2 superfamily XDD1_RS07100 PF00462 Glutaredoxin XDD1_RS07105 PF07214 Protein of unknown function (DUF1418) XDD1_RS07110 PF10722 Putative bacterial sensory transduction regulator XDD1_RS07115 PF05958 tRNA (Uracil-5-)-methyltransferase XDD1_RS07120 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS07125 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS07130 PF00497 Bacterial extracellular solute-binding proteins, family 3 XDD1_RS07135 PF00005 ABC transporter XDD1_RS07140 PF03956 Lysine exporter LysO XDD1_RS07145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS07150 PF12704 MacB-like periplasmic core domain XDD1_RS07150 PF00005 ABC transporter XDD1_RS07150 PF02687 FtsX-like permease family XDD1_RS07155 PF00313 'Cold-shock' DNA-binding domain XDD1_RS07160 PF02617 ATP-dependent Clp protease adaptor protein ClpS XDD1_RS07165 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS07165 PF02861 Clp amino terminal domain, pathogenicity island component XDD1_RS07165 PF17871 AAA lid domain XDD1_RS07165 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS07165 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS07170 PF01176 Translation initiation factor 1A / IF-1 XDD1_RS07175 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XDD1_RS07180 PF00664 ABC transporter transmembrane region XDD1_RS07180 PF00005 ABC transporter XDD1_RS07185 PF00664 ABC transporter transmembrane region XDD1_RS07185 PF00005 ABC transporter XDD1_RS07190 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS07195 PF01037 Lrp/AsnC ligand binding domain XDD1_RS07200 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XDD1_RS07200 PF01580 FtsK/SpoIIIE family XDD1_RS07200 PF17854 FtsK alpha domain XDD1_RS07200 PF09397 Ftsk gamma domain XDD1_RS07205 PF03548 Outer membrane lipoprotein carrier protein LolA XDD1_RS07210 PF12002 MgsA AAA+ ATPase C terminal XDD1_RS07210 PF16193 AAA C-terminal domain XDD1_RS07210 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS07215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XDD1_RS07215 PF02403 Seryl-tRNA synthetase N-terminal domain XDD1_RS07230 PF04055 Radical SAM superfamily XDD1_RS07235 PF01228 Glycine radical XDD1_RS07235 PF02901 Pyruvate formate lyase-like XDD1_RS07240 PF01226 Formate/nitrite transporter XDD1_RS07245 PF18381 YcaO cyclodehydratase C-terminal domain XDD1_RS07245 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding XDD1_RS07250 PF00710 Asparaginase, N-terminal XDD1_RS07250 PF17763 Glutaminase/Asparaginase C-terminal domain XDD1_RS07255 PF00266 Aminotransferase class-V XDD1_RS07260 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XDD1_RS07265 PF02224 Cytidylate kinase XDD1_RS07270 PF00575 S1 RNA binding domain XDD1_RS07275 PF00216 Bacterial DNA-binding protein XDD1_RS07280 PF03772 Competence protein XDD1_RS07280 PF00753 Metallo-beta-lactamase superfamily XDD1_RS07285 PF00005 ABC transporter XDD1_RS07285 PF00664 ABC transporter transmembrane region XDD1_RS07290 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XDD1_RS07295 PF03966 Trm112p-like protein XDD1_RS07300 PF02348 Cytidylyltransferase XDD1_RS07305 PF02698 DUF218 domain XDD1_RS07310 PF13847 Methyltransferase domain XDD1_RS07315 PF03882 MukF winged-helix domain XDD1_RS07315 PF17193 MukF C-terminal domain XDD1_RS07315 PF17192 MukF middle domain XDD1_RS07320 PF04288 MukE-like family XDD1_RS07325 PF04310 MukB N-terminal XDD1_RS07325 PF16330 MukB hinge domain XDD1_RS07330 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) XDD1_RS07335 PF01471 Putative peptidoglycan binding domain XDD1_RS07335 PF03734 L,D-transpeptidase catalytic domain XDD1_RS07340 PF05951 Bacterial protein of unknown function (DUF882) XDD1_RS07345 PF00753 Metallo-beta-lactamase superfamily XDD1_RS07350 PF00155 Aminotransferase class I and II XDD1_RS07355 PF00267 Gram-negative porin XDD1_RS07360 PF01336 OB-fold nucleic acid binding domain XDD1_RS07360 PF00152 tRNA synthetases class II (D, K and N) XDD1_RS07365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XDD1_RS07365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XDD1_RS07370 PF17432 Domain of unknown function (DUF3458_C) ARM repeats XDD1_RS07370 PF11940 Domain of unknown function (DUF3458) Ig-like fold XDD1_RS07370 PF01433 Peptidase family M1 domain XDD1_RS07375 PF01180 Dihydroorotate dehydrogenase XDD1_RS07380 PF07126 Cell-division protein ZapC XDD1_RS07385 PF03476 MOSC N-terminal beta barrel domain XDD1_RS07385 PF03473 MOSC domain XDD1_RS07385 PF00111 2Fe-2S iron-sulfur cluster binding domain XDD1_RS07390 PF01170 Putative RNA methylase family UPF0020 XDD1_RS07390 PF02926 THUMP domain XDD1_RS07390 PF10672 S-adenosylmethionine-dependent methyltransferase XDD1_RS07395 PF16326 ABC transporter C-terminal domain XDD1_RS07395 PF00005 ABC transporter XDD1_RS07395 PF12848 ABC transporter XDD1_RS07400 PF04403 Paraquat-inducible protein A XDD1_RS07405 PF02470 MlaD protein XDD1_RS07410 PF03886 ABC-type transport auxiliary lipoprotein component XDD1_RS07415 PF07977 FabA-like domain XDD1_RS07420 PF05362 Lon protease (S16) C-terminal proteolytic domain XDD1_RS07420 PF13654 AAA domain XDD1_RS07425 PF17414 MatP C-terminal ribbon-helix-helix domain XDD1_RS07425 PF06303 MatP N-terminal domain XDD1_RS07430 PF00691 OmpA family XDD1_RS07430 PF01389 OmpA-like transmembrane domain XDD1_RS07435 PF03846 Cell division inhibitor SulA XDD1_RS07475 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XDD1_RS07490 PF04055 Radical SAM superfamily XDD1_RS07490 PF06463 Molybdenum Cofactor Synthesis C XDD1_RS07510 PF12951 Passenger-associated-transport-repeat XDD1_RS07540 PF12805 FUSC-like inner membrane protein yccS XDD1_RS07545 PF00580 UvrD/REP helicase N-terminal domain XDD1_RS07545 PF12462 DNA helicase IV / RNA helicase N terminal XDD1_RS07545 PF13361 UvrD-like helicase C-terminal domain XDD1_RS07550 PF13380 CoA binding domain XDD1_RS07555 PF08755 Hemimethylated DNA-binding protein YccV like XDD1_RS07560 PF00708 Acylphosphatase XDD1_RS07565 PF04358 DsrC like protein XDD1_RS07605 PF03354 Phage Terminase XDD1_RS07610 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS07630 PF02803 Thiolase, C-terminal domain XDD1_RS07630 PF00108 Thiolase, N-terminal domain XDD1_RS07635 PF00248 Aldo/keto reductase family XDD1_RS07645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS07645 PF03466 LysR substrate binding domain XDD1_RS07650 PF00144 Beta-lactamase XDD1_RS07655 PF00324 Amino acid permease XDD1_RS07675 PF13936 Helix-turn-helix domain XDD1_RS07675 PF00665 Integrase core domain XDD1_RS07695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS07695 PF03466 LysR substrate binding domain XDD1_RS07700 PF00892 EamA-like transporter family XDD1_RS07715 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS07715 PF00072 Response regulator receiver domain XDD1_RS07720 PF01541 GIY-YIG catalytic domain XDD1_RS07720 PF08459 UvrC Helix-hairpin-helix N-terminal XDD1_RS07720 PF02151 UvrB/uvrC motif XDD1_RS07725 PF01066 CDP-alcohol phosphatidyltransferase XDD1_RS07745 PF13356 Arm DNA-binding domain XDD1_RS07745 PF00589 Phage integrase family XDD1_RS07770 PF05638 Type VI secretion system effector, Hcp XDD1_RS07820 PF03354 Phage Terminase XDD1_RS07825 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS07845 PF05360 yiaA/B two helix domain XDD1_RS07850 PF00717 Peptidase S24-like XDD1_RS07850 PF01381 Helix-turn-helix XDD1_RS07870 PF00975 Thioesterase domain XDD1_RS07880 PF06821 Serine hydrolase XDD1_RS07890 PF01070 FMN-dependent dehydrogenase XDD1_RS07900 PF02567 Phenazine biosynthesis-like protein XDD1_RS07910 PF01810 LysE type translocator XDD1_RS07915 PF13592 Winged helix-turn helix XDD1_RS07915 PF13358 DDE superfamily endonuclease XDD1_RS07920 PF03279 Bacterial lipid A biosynthesis acyltransferase XDD1_RS07930 PF01435 Peptidase family M48 XDD1_RS07940 PF07690 Major Facilitator Superfamily XDD1_RS07945 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS07945 PF00072 Response regulator receiver domain XDD1_RS07950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS07950 PF05231 MASE1 XDD1_RS07950 PF07730 Histidine kinase XDD1_RS07955 PF07690 Major Facilitator Superfamily XDD1_RS07960 PF13847 Methyltransferase domain XDD1_RS07965 PF02659 Putative manganese efflux pump XDD1_RS07970 PF06173 Protein of unknown function (DUF986) XDD1_RS07975 PF03613 PTS system mannose/fructose/sorbose family IID component XDD1_RS07980 PF03609 PTS system sorbose-specific iic component XDD1_RS07985 PF03830 PTS system sorbose subfamily IIB component XDD1_RS07985 PF03610 PTS system fructose IIA component XDD1_RS07990 PF03313 Serine dehydratase alpha chain XDD1_RS07990 PF03315 Serine dehydratase beta chain XDD1_RS07995 PF00293 NUDIX domain XDD1_RS08000 PF00425 chorismate binding enzyme XDD1_RS08000 PF04715 Anthranilate synthase component I, N terminal region XDD1_RS08005 PF03701 Uncharacterised protein family (UPF0181) XDD1_RS08010 PF13995 YebF-like protein XDD1_RS08015 PF00561 alpha/beta hydrolase fold XDD1_RS08020 PF06440 DNA polymerase III, theta subunit XDD1_RS08035 PF00210 Ferritin-like domain XDD1_RS08040 PF04234 CopC domain XDD1_RS08045 PF05425 Copper resistance protein D XDD1_RS08050 PF10709 Protein of unknown function (DUF2511) XDD1_RS08055 PF13185 GAF domain XDD1_RS08060 PF17516 ProQ C-terminal domain XDD1_RS08060 PF04352 ProQ/FINO family XDD1_RS08065 PF11818 C-terminal domain of tail specific protease (DUF3340) XDD1_RS08065 PF00595 PDZ domain XDD1_RS08065 PF03572 Peptidase family S41 XDD1_RS08065 PF17804 Tail specific protease N-terminal domain XDD1_RS08070 PF01435 Peptidase family M48 XDD1_RS08075 PF00375 Sodium:dicarboxylate symporter family XDD1_RS08080 PF04307 LexA-binding, inner membrane-associated putative hydrolase XDD1_RS08085 PF14002 YniB-like protein XDD1_RS08090 PF03881 Fructosamine kinase XDD1_RS08095 PF00950 ABC 3 transport family XDD1_RS08100 PF00950 ABC 3 transport family XDD1_RS08105 PF00005 ABC transporter XDD1_RS08110 PF01297 Zinc-uptake complex component A periplasmic XDD1_RS08115 PF01464 Transglycosylase SLT domain XDD1_RS08125 PF09134 Invasin, domain 3 XDD1_RS08125 PF07979 Intimin C-type lectin domain XDD1_RS08125 PF11924 Inverse autotransporter, beta-domain XDD1_RS08125 PF02369 Bacterial Ig-like domain (group 1) XDD1_RS08165 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XDD1_RS08165 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XDD1_RS08165 PF02824 TGS domain XDD1_RS08165 PF03129 Anticodon binding domain XDD1_RS08170 PF05198 Translation initiation factor IF-3, N-terminal domain XDD1_RS08170 PF00707 Translation initiation factor IF-3, C-terminal domain XDD1_RS08175 PF01632 Ribosomal protein L35 XDD1_RS08180 PF00453 Ribosomal protein L20 XDD1_RS08185 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XDD1_RS08185 PF01409 tRNA synthetases class II core domain (F) XDD1_RS08190 PF03483 B3/4 domain XDD1_RS08190 PF03147 Ferredoxin-fold anticodon binding domain XDD1_RS08190 PF01588 Putative tRNA binding domain XDD1_RS08190 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XDD1_RS08190 PF03484 tRNA synthetase B5 domain XDD1_RS08195 PF00216 Bacterial DNA-binding protein XDD1_RS08200 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XDD1_RS08205 PF00535 Glycosyl transferase family 2 XDD1_RS08210 PF00551 Formyl transferase XDD1_RS08210 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS08210 PF02911 Formyl transferase, C-terminal domain XDD1_RS08215 PF01522 Polysaccharide deacetylase XDD1_RS08220 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase XDD1_RS08225 PF00892 EamA-like transporter family XDD1_RS08235 PF00877 NlpC/P60 family XDD1_RS08255 PF00550 Phosphopantetheine attachment site XDD1_RS08255 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS08255 PF00501 AMP-binding enzyme XDD1_RS08255 PF00668 Condensation domain XDD1_RS08260 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XDD1_RS08260 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XDD1_RS08275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XDD1_RS08275 PF02770 Acyl-CoA dehydrogenase, middle domain XDD1_RS08275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XDD1_RS08280 PF08659 KR domain XDD1_RS08280 PF00550 Phosphopantetheine attachment site XDD1_RS08280 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS08280 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS08280 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS08280 PF14765 Polyketide synthase dehydratase XDD1_RS08280 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS08280 PF00668 Condensation domain XDD1_RS08280 PF00501 AMP-binding enzyme XDD1_RS08285 PF00144 Beta-lactamase XDD1_RS08290 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS08290 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS08290 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS08290 PF00668 Condensation domain XDD1_RS08290 PF00698 Acyl transferase domain XDD1_RS08290 PF00550 Phosphopantetheine attachment site XDD1_RS08295 PF00975 Thioesterase domain XDD1_RS08305 PF00501 AMP-binding enzyme XDD1_RS08305 PF00550 Phosphopantetheine attachment site XDD1_RS08305 PF00668 Condensation domain XDD1_RS08305 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS08310 PF00550 Phosphopantetheine attachment site XDD1_RS08310 PF00698 Acyl transferase domain XDD1_RS08310 PF00668 Condensation domain XDD1_RS08310 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS08310 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS08310 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS08325 PF02675 S-adenosylmethionine decarboxylase XDD1_RS08330 PF00005 ABC transporter XDD1_RS08335 PF01032 FecCD transport family XDD1_RS08340 PF01497 Periplasmic binding protein XDD1_RS08345 PF05171 Haemin-degrading HemS.ChuX domain XDD1_RS08350 PF00593 TonB dependent receptor XDD1_RS08350 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS08355 PF00793 DAHP synthetase I family XDD1_RS08360 PF03618 Kinase/pyrophosphorylase XDD1_RS08390 PF00589 Phage integrase family XDD1_RS08390 PF13495 Phage integrase, N-terminal SAM-like domain XDD1_RS08395 PF01807 CHC2 zinc finger XDD1_RS08395 PF08275 DNA primase catalytic core, N-terminal domain XDD1_RS08395 PF10410 DnaB-helicase binding domain of primase XDD1_RS08400 PF01381 Helix-turn-helix XDD1_RS08430 PF00589 Phage integrase family XDD1_RS08430 PF13495 Phage integrase, N-terminal SAM-like domain XDD1_RS08440 PF10410 DnaB-helicase binding domain of primase XDD1_RS08440 PF08275 DNA primase catalytic core, N-terminal domain XDD1_RS08440 PF01807 CHC2 zinc finger XDD1_RS08480 PF00589 Phage integrase family XDD1_RS08480 PF13495 Phage integrase, N-terminal SAM-like domain XDD1_RS08490 PF10410 DnaB-helicase binding domain of primase XDD1_RS08490 PF08275 DNA primase catalytic core, N-terminal domain XDD1_RS08490 PF01807 CHC2 zinc finger XDD1_RS08520 PF00391 PEP-utilising enzyme, mobile domain XDD1_RS08520 PF02896 PEP-utilising enzyme, TIM barrel domain XDD1_RS08520 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XDD1_RS08525 PF01594 AI-2E family transporter XDD1_RS08530 PF02913 FAD linked oxidases, C-terminal domain XDD1_RS08530 PF13183 4Fe-4S dicluster domain XDD1_RS08530 PF01565 FAD binding domain XDD1_RS08535 PF03061 Thioesterase superfamily XDD1_RS08540 PF03734 L,D-transpeptidase catalytic domain XDD1_RS08540 PF01476 LysM domain XDD1_RS08540 PF17969 L,D-transpeptidase C-terminal domain XDD1_RS08545 PF04728 Lipoprotein leucine-zipper XDD1_RS08550 PF02887 Pyruvate kinase, alpha/beta domain XDD1_RS08550 PF00224 Pyruvate kinase, barrel domain XDD1_RS08565 PF01554 MatE XDD1_RS08570 PF00677 Lumazine binding domain XDD1_RS08580 PF07690 Major Facilitator Superfamily XDD1_RS08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS08585 PF03466 LysR substrate binding domain XDD1_RS08590 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS08595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XDD1_RS08595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XDD1_RS08600 PF00462 Glutaredoxin XDD1_RS08605 PF00929 Exonuclease XDD1_RS08610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XDD1_RS08620 PF01047 MarR family XDD1_RS08625 PF05433 Glycine zipper 2TM domain XDD1_RS08630 PF03702 Anhydro-N-acetylmuramic acid kinase XDD1_RS08635 PF01243 Pyridoxamine 5'-phosphate oxidase XDD1_RS08635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XDD1_RS08640 PF01479 S4 domain XDD1_RS08640 PF00579 tRNA synthetases class I (W and Y) XDD1_RS08645 PF08543 Phosphomethylpyrimidine kinase XDD1_RS08655 PF00005 ABC transporter XDD1_RS08660 PF00005 ABC transporter XDD1_RS08660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XDD1_RS08665 PF12911 N-terminal TM domain of oligopeptide transport permease C XDD1_RS08665 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS08670 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS08675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS08680 PF02954 Bacterial regulatory protein, Fis family XDD1_RS08680 PF00158 Sigma-54 interaction domain XDD1_RS08685 PF04012 PspA/IM30 family XDD1_RS08690 PF06667 Phage shock protein B XDD1_RS08695 PF04024 PspC domain XDD1_RS08700 PF04317 YcjX-like family, DUF463 XDD1_RS08705 PF05128 Domain of unknown function (DUF697) XDD1_RS08710 PF18024 Helix-turn-helix domain XDD1_RS08710 PF00158 Sigma-54 interaction domain XDD1_RS08715 PF05638 Type VI secretion system effector, Hcp XDD1_RS08730 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS08730 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS08730 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS08730 PF17871 AAA lid domain XDD1_RS08740 PF05947 Type VI secretion system, TssF XDD1_RS08745 PF04965 Gene 25-like lysozyme XDD1_RS08760 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_RS08765 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_RS08775 PF14331 ImcF-related N-terminal domain XDD1_RS08775 PF06744 Type VI secretion protein IcmF C-terminal XDD1_RS08775 PF06761 Intracellular multiplication and human macrophage-killing XDD1_RS08780 PF13677 Membrane MotB of proton-channel complex MotA/MotB XDD1_RS08780 PF00691 OmpA family XDD1_RS08785 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE XDD1_RS08815 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS08820 PF08534 Redoxin XDD1_RS08825 PF01544 CorA-like Mg2+ transporter protein XDD1_RS08830 PF01171 PP-loop family XDD1_RS08835 PF00550 Phosphopantetheine attachment site XDD1_RS08835 PF00668 Condensation domain XDD1_RS08835 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS08835 PF00501 AMP-binding enzyme XDD1_RS08845 PF00893 Small Multidrug Resistance protein XDD1_RS08855 PF03466 LysR substrate binding domain XDD1_RS08855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS08860 PF07690 Major Facilitator Superfamily XDD1_RS08865 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS08865 PF17871 AAA lid domain XDD1_RS08865 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS08865 PF02861 Clp amino terminal domain, pathogenicity island component XDD1_RS08865 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS08875 PF13195 Protein of unknown function (DUF4011) XDD1_RS08875 PF13086 AAA domain XDD1_RS08875 PF13087 AAA domain XDD1_RS08875 PF13195 Protein of unknown function (DUF4011) XDD1_RS08875 PF13087 AAA domain XDD1_RS08875 PF13086 AAA domain XDD1_RS08880 PF13358 DDE superfamily endonuclease XDD1_RS08895 PF00171 Aldehyde dehydrogenase family XDD1_RS08905 PF07729 FCD domain XDD1_RS08905 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS08915 PF00202 Aminotransferase class-III XDD1_RS08920 PF05656 Protein of unknown function (DUF805) XDD1_RS08925 PF01266 FAD dependent oxidoreductase XDD1_RS08930 PF05035 2-keto-3-deoxy-galactonokinase XDD1_RS08935 PF01081 KDPG and KHG aldolase XDD1_RS08940 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain XDD1_RS08940 PF13378 Enolase C-terminal domain-like XDD1_RS08945 PF07690 Major Facilitator Superfamily XDD1_RS08965 PF07690 Major Facilitator Superfamily XDD1_RS08970 PF13592 Winged helix-turn helix XDD1_RS08970 PF13358 DDE superfamily endonuclease XDD1_RS08985 PF00582 Universal stress protein family XDD1_RS08990 PF00582 Universal stress protein family XDD1_RS09000 PF04231 Endonuclease I XDD1_RS09025 PF13358 DDE superfamily endonuclease XDD1_RS09050 PF14765 Polyketide synthase dehydratase XDD1_RS09050 PF00550 Phosphopantetheine attachment site XDD1_RS09050 PF08659 KR domain XDD1_RS09050 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS09050 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS09050 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS09050 PF00698 Acyl transferase domain XDD1_RS09055 PF00550 Phosphopantetheine attachment site XDD1_RS09055 PF08659 KR domain XDD1_RS09055 PF00698 Acyl transferase domain XDD1_RS09055 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS09055 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS09055 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS09055 PF14765 Polyketide synthase dehydratase XDD1_RS09060 PF00202 Aminotransferase class-III XDD1_RS09065 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS09065 PF00593 TonB dependent receptor XDD1_RS09070 PF04183 IucA / IucC family XDD1_RS09070 PF06276 Ferric iron reductase FhuF-like transporter XDD1_RS09075 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XDD1_RS09075 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XDD1_RS09080 PF07690 Major Facilitator Superfamily XDD1_RS09085 PF06276 Ferric iron reductase FhuF-like transporter XDD1_RS09085 PF04183 IucA / IucC family XDD1_RS09090 PF03328 HpcH/HpaI aldolase/citrate lyase family XDD1_RS09095 PF06276 Ferric iron reductase FhuF-like transporter XDD1_RS09095 PF04183 IucA / IucC family XDD1_RS09100 PF01497 Periplasmic binding protein XDD1_RS09105 PF01032 FecCD transport family XDD1_RS09110 PF01032 FecCD transport family XDD1_RS09115 PF00005 ABC transporter XDD1_RS09125 PF03737 Aldolase/RraA XDD1_RS09130 PF02322 Cytochrome bd terminal oxidase subunit II XDD1_RS09135 PF01654 Cytochrome bd terminal oxidase subunit I XDD1_RS09145 PF16295 Tetracyclin repressor-like, C-terminal domain XDD1_RS09145 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS09155 PF00012 Hsp70 protein XDD1_RS09160 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS09160 PF00155 Aminotransferase class I and II XDD1_RS09170 PF01278 Omptin family XDD1_RS09175 PF01266 FAD dependent oxidoreductase XDD1_RS09190 PF12697 Alpha/beta hydrolase family XDD1_RS09205 PF02525 Flavodoxin-like fold XDD1_RS09210 PF12833 Helix-turn-helix domain XDD1_RS09210 PF06719 AraC-type transcriptional regulator N-terminus XDD1_RS09215 PF01926 50S ribosome-binding GTPase XDD1_RS09215 PF06071 Protein of unknown function (DUF933) XDD1_RS09220 PF01195 Peptidyl-tRNA hydrolase XDD1_RS09230 PF03797 Autotransporter beta-domain XDD1_RS09230 PF00657 GDSL-like Lipase/Acylhydrolase XDD1_RS09235 PF00657 GDSL-like Lipase/Acylhydrolase XDD1_RS09235 PF03797 Autotransporter beta-domain XDD1_RS09240 PF14572 Phosphoribosyl synthetase-associated domain XDD1_RS09240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XDD1_RS09245 PF00288 GHMP kinases N terminal domain XDD1_RS09245 PF08544 GHMP kinases C terminal XDD1_RS09250 PF03550 Outer membrane lipoprotein LolB XDD1_RS09255 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XDD1_RS09255 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XDD1_RS09255 PF01488 Shikimate / quinate 5-dehydrogenase XDD1_RS09260 PF00472 RF-1 domain XDD1_RS09260 PF03462 PCRF domain XDD1_RS09265 PF17827 PrmC N-terminal domain XDD1_RS09265 PF13847 Methyltransferase domain XDD1_RS09270 PF13369 Transglutaminase-like superfamily XDD1_RS09275 PF00793 DAHP synthetase I family XDD1_RS09280 PF01740 STAS domain XDD1_RS09280 PF00916 Sulfate permease family XDD1_RS09285 PF00782 Dual specificity phosphatase, catalytic domain XDD1_RS09290 PF12146 Serine aminopeptidase, S33 XDD1_RS09290 PF12147 Putative methyltransferase XDD1_RS09295 PF01066 CDP-alcohol phosphatidyltransferase XDD1_RS09300 PF08279 HTH domain XDD1_RS09300 PF13280 WYL domain XDD1_RS09305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XDD1_RS09330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XDD1_RS09335 PF02613 Nitrate reductase delta subunit XDD1_RS09340 PF05638 Type VI secretion system effector, Hcp XDD1_RS09360 PF07273 Protein of unknown function (DUF1439) XDD1_RS09365 PF07690 Major Facilitator Superfamily XDD1_RS09370 PF13302 Acetyltransferase (GNAT) domain XDD1_RS09375 PF13358 DDE superfamily endonuclease XDD1_RS09385 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS09385 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS09385 PF17871 AAA lid domain XDD1_RS09385 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS09395 PF05947 Type VI secretion system, TssF XDD1_RS09400 PF04965 Gene 25-like lysozyme XDD1_RS09415 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_RS09420 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 XDD1_RS09430 PF14331 ImcF-related N-terminal domain XDD1_RS09430 PF06761 Intracellular multiplication and human macrophage-killing XDD1_RS09430 PF06744 Type VI secretion protein IcmF C-terminal XDD1_RS09435 PF13677 Membrane MotB of proton-channel complex MotA/MotB XDD1_RS09435 PF00691 OmpA family XDD1_RS09440 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE XDD1_RS09470 PF06715 Gp5 C-terminal repeat (3 copies) XDD1_RS09470 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS09475 PF13592 Winged helix-turn helix XDD1_RS09475 PF13358 DDE superfamily endonuclease XDD1_RS09480 PF03023 Lipid II flippase MurJ XDD1_RS09490 PF03485 Arginyl tRNA synthetase N terminal domain XDD1_RS09490 PF05746 DALR anticodon binding domain XDD1_RS09490 PF00750 tRNA synthetases class I (R) XDD1_RS09495 PF03932 CutC family XDD1_RS09500 PF08003 Protein of unknown function (DUF1698) XDD1_RS09505 PF13649 Methyltransferase domain XDD1_RS09510 PF01124 MAPEG family XDD1_RS09515 PF00152 tRNA synthetases class II (D, K and N) XDD1_RS09515 PF02938 GAD domain XDD1_RS09515 PF01336 OB-fold nucleic acid binding domain XDD1_RS09520 PF00293 NUDIX domain XDD1_RS09525 PF01709 Transcriptional regulator XDD1_RS09530 PF02075 Crossover junction endodeoxyribonuclease RuvC XDD1_RS09535 PF01330 RuvA N terminal domain XDD1_RS09535 PF07499 RuvA, C-terminal domain XDD1_RS09540 PF17864 RuvB AAA lid domain XDD1_RS09540 PF05491 RuvB C-terminal winged helix domain XDD1_RS09540 PF05496 Holliday junction DNA helicase RuvB P-loop domain XDD1_RS09555 PF00950 ABC 3 transport family XDD1_RS09560 PF00005 ABC transporter XDD1_RS09565 PF01297 Zinc-uptake complex component A periplasmic XDD1_RS09570 PF01551 Peptidase family M23 XDD1_RS09570 PF08525 Opacity-associated protein A N-terminal motif XDD1_RS09570 PF01476 LysM domain XDD1_RS09575 PF03279 Bacterial lipid A biosynthesis acyltransferase XDD1_RS09580 PF02887 Pyruvate kinase, alpha/beta domain XDD1_RS09580 PF00224 Pyruvate kinase, barrel domain XDD1_RS09585 PF01380 SIS domain XDD1_RS09585 PF01418 Helix-turn-helix domain, rpiR family XDD1_RS09590 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XDD1_RS09590 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XDD1_RS09595 PF00893 Small Multidrug Resistance protein XDD1_RS09600 PF00893 Small Multidrug Resistance protein XDD1_RS09605 PF01042 Endoribonuclease L-PSP XDD1_RS09610 PF13307 Helicase C-terminal domain XDD1_RS09610 PF04851 Type III restriction enzyme, res subunit XDD1_RS09615 PF00814 Glycoprotease family XDD1_RS09620 PF03843 Outer membrane lipoprotein Slp family XDD1_RS09625 PF00501 AMP-binding enzyme XDD1_RS09625 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS09630 PF01612 3'-5' exonuclease XDD1_RS09630 PF00570 HRDC domain XDD1_RS09635 PF03776 Septum formation topological specificity factor MinE XDD1_RS09640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XDD1_RS09645 PF03775 Septum formation inhibitor MinC, C-terminal domain XDD1_RS09645 PF05209 Septum formation inhibitor MinC, N-terminal domain XDD1_RS09650 PF05166 YcgL domain XDD1_RS09655 PF13406 Transglycosylase SLT domain XDD1_RS09660 PF01557 Fumarylacetoacetate (FAA) hydrolase family XDD1_RS09665 PF03692 Putative zinc- or iron-chelating domain XDD1_RS09680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XDD1_RS09680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XDD1_RS09685 PF11739 Dicarboxylate transport XDD1_RS09690 PF13617 YnbE-like lipoprotein XDD1_RS09695 PF07027 Protein of unknown function (DUF1318) XDD1_RS09700 PF02525 Flavodoxin-like fold XDD1_RS09705 PF00271 Helicase conserved C-terminal domain XDD1_RS09705 PF04408 Helicase associated domain (HA2) XDD1_RS09705 PF11898 Domain of unknown function (DUF3418) XDD1_RS09705 PF00270 DEAD/DEAH box helicase XDD1_RS09705 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XDD1_RS09715 PF13954 PapC N-terminal domain XDD1_RS09715 PF13953 PapC C-terminal domain XDD1_RS09715 PF00577 Outer membrane usher protein XDD1_RS09720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XDD1_RS09720 PF02753 Pili assembly chaperone PapD, C-terminal domain XDD1_RS09725 PF00419 Fimbrial protein XDD1_RS09730 PF13520 Amino acid permease XDD1_RS09735 PF07338 Protein of unknown function (DUF1471) XDD1_RS09740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain XDD1_RS09740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain XDD1_RS09740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch XDD1_RS09745 PF02233 NAD(P) transhydrogenase beta subunit XDD1_RS09755 PF00005 ABC transporter XDD1_RS09760 PF12704 MacB-like periplasmic core domain XDD1_RS09760 PF00005 ABC transporter XDD1_RS09760 PF02687 FtsX-like permease family XDD1_RS09770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS09770 PF00529 HlyD membrane-fusion protein of T1SS XDD1_RS09795 PF00589 Phage integrase family XDD1_RS09795 PF02899 Phage integrase, N-terminal SAM-like domain XDD1_RS09820 PF13358 DDE superfamily endonuclease XDD1_RS09825 PF00027 Cyclic nucleotide-binding domain XDD1_RS09825 PF00325 Bacterial regulatory proteins, crp family XDD1_RS09835 PF00282 Pyridoxal-dependent decarboxylase conserved domain XDD1_RS09840 PF02668 Taurine catabolism dioxygenase TauD, TfdA family XDD1_RS09845 PF13592 Winged helix-turn helix XDD1_RS09845 PF13358 DDE superfamily endonuclease XDD1_RS09855 PF04055 Radical SAM superfamily XDD1_RS09865 PF01810 LysE type translocator XDD1_RS09870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS09870 PF03466 LysR substrate binding domain XDD1_RS09875 PF07690 Major Facilitator Superfamily XDD1_RS09880 PF13649 Methyltransferase domain XDD1_RS09890 PF03797 Autotransporter beta-domain XDD1_RS09890 PF12951 Passenger-associated-transport-repeat XDD1_RS09890 PF00082 Subtilase family XDD1_RS09900 PF07690 Major Facilitator Superfamily XDD1_RS09915 PF00892 EamA-like transporter family XDD1_RS09925 PF00593 TonB dependent receptor XDD1_RS09925 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS09935 PF00202 Aminotransferase class-III XDD1_RS09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS09950 PF03466 LysR substrate binding domain XDD1_RS09955 PF04229 GrpB protein XDD1_RS09960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XDD1_RS09965 PF11954 Domain of unknown function (DUF3471) XDD1_RS09965 PF00144 Beta-lactamase XDD1_RS09970 PF00085 Thioredoxin XDD1_RS09980 PF12833 Helix-turn-helix domain XDD1_RS09980 PF02311 AraC-like ligand binding domain XDD1_RS09990 PF02666 Phosphatidylserine decarboxylase XDD1_RS10000 PF00005 ABC transporter XDD1_RS10000 PF00664 ABC transporter transmembrane region XDD1_RS10005 PF00106 short chain dehydrogenase XDD1_RS10010 PF06932 Protein of unknown function (DUF1283) XDD1_RS10025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS10025 PF03466 LysR substrate binding domain XDD1_RS10030 PF13358 DDE superfamily endonuclease XDD1_RS10035 PF03466 LysR substrate binding domain XDD1_RS10035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS10040 PF07690 Major Facilitator Superfamily XDD1_RS10050 PF05472 DNA replication terminus site-binding protein (Ter protein) XDD1_RS10055 PF00206 Lyase XDD1_RS10055 PF10415 Fumarase C C-terminus XDD1_RS10060 PF01238 Phosphomannose isomerase type I XDD1_RS10065 PF06097 Bacterial protein of unknown function (DUF945) XDD1_RS10070 PF00962 Adenosine/AMP deaminase XDD1_RS10075 PF13593 SBF-like CPA transporter family (DUF4137) XDD1_RS10080 PF01408 Oxidoreductase family, NAD-binding Rossmann fold XDD1_RS10080 PF02894 Oxidoreductase family, C-terminal alpha/beta domain XDD1_RS10085 PF10754 Protein of unknown function (DUF2569) XDD1_RS10090 PF02508 Rnf-Nqr subunit, membrane protein XDD1_RS10095 PF04060 Putative Fe-S cluster XDD1_RS10100 PF10531 SLBB domain XDD1_RS10100 PF13375 RnfC Barrel sandwich hybrid domain XDD1_RS10100 PF13237 4Fe-4S dicluster domain XDD1_RS10100 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XDD1_RS10105 PF03116 NQR2, RnfD, RnfE family XDD1_RS10110 PF04205 FMN-binding domain XDD1_RS10115 PF02508 Rnf-Nqr subunit, membrane protein XDD1_RS10120 PF10576 Iron-sulfur binding domain of endonuclease III XDD1_RS10120 PF00730 HhH-GPD superfamily base excision DNA repair protein XDD1_RS10120 PF00633 Helix-hairpin-helix motif XDD1_RS10130 PF17876 Cold shock domain XDD1_RS10130 PF08206 Ribonuclease B OB domain XDD1_RS10130 PF00773 RNB domain XDD1_RS10130 PF00575 S1 RNA binding domain XDD1_RS10140 PF01253 Translation initiation factor SUI1 XDD1_RS10145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XDD1_RS10150 PF18073 Rubredoxin metal binding domain XDD1_RS10155 PF06305 Lipopolysaccharide assembly protein A domain XDD1_RS10160 PF00925 GTP cyclohydrolase II XDD1_RS10165 PF00694 Aconitase C-terminal domain XDD1_RS10165 PF00330 Aconitase family (aconitate hydratase) XDD1_RS10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS10175 PF03466 LysR substrate binding domain XDD1_RS10180 PF08272 Topoisomerase I zinc-ribbon-like XDD1_RS10180 PF01396 Topoisomerase DNA binding C4 zinc finger XDD1_RS10180 PF01131 DNA topoisomerase XDD1_RS10180 PF01751 Toprim domain XDD1_RS10185 PF10692 Protein of unknown function (DUF2498) XDD1_RS10190 PF08496 Peptidase family S49 N-terminal XDD1_RS10190 PF01343 Peptidase family S49 XDD1_RS10195 PF00106 short chain dehydrogenase XDD1_RS10200 PF00849 RNA pseudouridylate synthase XDD1_RS10200 PF01479 S4 domain XDD1_RS10205 PF01300 Telomere recombination XDD1_RS10210 PF02811 PHP domain XDD1_RS10215 PF00425 chorismate binding enzyme XDD1_RS10215 PF04715 Anthranilate synthase component I, N terminal region XDD1_RS10220 PF00117 Glutamine amidotransferase class-I XDD1_RS10225 PF00591 Glycosyl transferase family, a/b domain XDD1_RS10225 PF02885 Glycosyl transferase family, helical bundle domain XDD1_RS10230 PF00218 Indole-3-glycerol phosphate synthase XDD1_RS10230 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XDD1_RS10235 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS10240 PF00290 Tryptophan synthase alpha chain XDD1_RS10245 PF03922 OmpW family XDD1_RS10255 PF01740 STAS domain XDD1_RS10255 PF00916 Sulfate permease family XDD1_RS10260 PF04279 Intracellular septation protein A XDD1_RS10265 PF03061 Thioesterase superfamily XDD1_RS10270 PF03544 Gram-negative bacterial TonB protein C-terminal XDD1_RS10275 PF13396 Phospholipase_D-nuclease N-terminal XDD1_RS10275 PF13091 PLD-like domain XDD1_RS10280 PF04269 Protein of unknown function, DUF440 XDD1_RS10285 PF00005 ABC transporter XDD1_RS10285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XDD1_RS10290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XDD1_RS10290 PF00005 ABC transporter XDD1_RS10295 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS10295 PF12911 N-terminal TM domain of oligopeptide transport permease C XDD1_RS10300 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS10305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS10310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS10315 PF00465 Iron-containing alcohol dehydrogenase XDD1_RS10315 PF00171 Aldehyde dehydrogenase family XDD1_RS10320 PF00265 Thymidine kinase XDD1_RS10325 PF00816 H-NS histone family XDD1_RS10330 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS10335 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XDD1_RS10335 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XDD1_RS10335 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XDD1_RS10340 PF00483 Nucleotidyl transferase XDD1_RS10345 PF02810 SEC-C motif XDD1_RS10350 PF00551 Formyl transferase XDD1_RS10350 PF01842 ACT domain XDD1_RS10365 PF03372 Endonuclease/Exonuclease/phosphatase family XDD1_RS10370 PF01131 DNA topoisomerase XDD1_RS10370 PF01751 Toprim domain XDD1_RS10375 PF00586 AIR synthase related protein, N-terminal domain XDD1_RS10375 PF02769 AIR synthase related protein, C-terminal domain XDD1_RS10380 PF00881 Nitroreductase family XDD1_RS10385 PF01343 Peptidase family S49 XDD1_RS10390 PF17763 Glutaminase/Asparaginase C-terminal domain XDD1_RS10390 PF00710 Asparaginase, N-terminal XDD1_RS10395 PF07023 Protein of unknown function (DUF1315) XDD1_RS10400 PF01641 SelR domain XDD1_RS10405 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XDD1_RS10405 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XDD1_RS10410 PF01263 Aldose 1-epimerase XDD1_RS10415 PF00842 Alanine racemase, C-terminal domain XDD1_RS10415 PF01168 Alanine racemase, N-terminal domain XDD1_RS10420 PF01266 FAD dependent oxidoreductase XDD1_RS10425 PF07840 FadR C-terminal domain XDD1_RS10425 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS10430 PF06450 Bacterial Na+/H+ antiporter B (NhaB) XDD1_RS10435 PF02600 Disulfide bond formation protein DsbB XDD1_RS10440 PF07690 Major Facilitator Superfamily XDD1_RS10445 PF13592 Winged helix-turn helix XDD1_RS10445 PF13358 DDE superfamily endonuclease XDD1_RS10465 PF13520 Amino acid permease XDD1_RS10470 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain XDD1_RS10470 PF01276 Orn/Lys/Arg decarboxylase, major domain XDD1_RS10470 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain XDD1_RS10495 PF00501 AMP-binding enzyme XDD1_RS10495 PF00668 Condensation domain XDD1_RS10495 PF00550 Phosphopantetheine attachment site XDD1_RS10495 PF00975 Thioesterase domain XDD1_RS10495 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS10500 PF00550 Phosphopantetheine attachment site XDD1_RS10500 PF00668 Condensation domain XDD1_RS10500 PF00501 AMP-binding enzyme XDD1_RS10500 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS10500 PF07993 Male sterility protein XDD1_RS10505 PF00501 AMP-binding enzyme XDD1_RS10505 PF00668 Condensation domain XDD1_RS10505 PF00550 Phosphopantetheine attachment site XDD1_RS10505 PF00975 Thioesterase domain XDD1_RS10505 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS10510 PF00282 Pyridoxal-dependent decarboxylase conserved domain XDD1_RS10515 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS10515 PF00501 AMP-binding enzyme XDD1_RS10515 PF00975 Thioesterase domain XDD1_RS10515 PF00668 Condensation domain XDD1_RS10515 PF00550 Phosphopantetheine attachment site XDD1_RS10520 PF00668 Condensation domain XDD1_RS10520 PF00550 Phosphopantetheine attachment site XDD1_RS10520 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS10520 PF00501 AMP-binding enzyme XDD1_RS10525 PF00501 AMP-binding enzyme XDD1_RS10525 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS10525 PF00668 Condensation domain XDD1_RS10525 PF00550 Phosphopantetheine attachment site XDD1_RS10525 PF00975 Thioesterase domain XDD1_RS10530 PF00282 Pyridoxal-dependent decarboxylase conserved domain XDD1_RS10535 PF00296 Luciferase-like monooxygenase XDD1_RS10540 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS10540 PF00107 Zinc-binding dehydrogenase XDD1_RS10550 PF00664 ABC transporter transmembrane region XDD1_RS10550 PF00005 ABC transporter XDD1_RS10555 PF00474 Sodium:solute symporter family XDD1_RS10565 PF00171 Aldehyde dehydrogenase family XDD1_RS10565 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XDD1_RS10565 PF01619 Proline dehydrogenase XDD1_RS10565 PF14850 DNA-binding domain of Proline dehydrogenase XDD1_RS10570 PF02899 Phage integrase, N-terminal SAM-like domain XDD1_RS10575 PF04542 Sigma-70 region 2 XDD1_RS10575 PF04539 Sigma-70 region 3 XDD1_RS10575 PF04545 Sigma-70, region 4 XDD1_RS10580 PF00700 Bacterial flagellin C-terminal helical region XDD1_RS10580 PF00669 Bacterial flagellin N-terminal helical region XDD1_RS10590 PF07196 Flagellin hook IN motif XDD1_RS10590 PF07195 Flagellar hook-associated protein 2 C-terminus XDD1_RS10590 PF02465 Flagellar hook-associated protein 2 N-terminus XDD1_RS10595 PF02561 Flagellar protein FliS XDD1_RS10600 PF05400 Flagellar protein FliT XDD1_RS10610 PF13358 DDE superfamily endonuclease XDD1_RS10620 PF04221 RelB antitoxin XDD1_RS10625 PF02049 Flagellar hook-basal body complex protein FliE XDD1_RS10630 PF01514 Secretory protein of YscJ/FliF family XDD1_RS10630 PF08345 Flagellar M-ring protein C-terminal XDD1_RS10635 PF01706 FliG C-terminal domain XDD1_RS10635 PF14842 FliG N-terminal domain XDD1_RS10635 PF14841 FliG middle domain XDD1_RS10640 PF02108 Flagellar assembly protein FliH XDD1_RS10645 PF18269 T3SS EscN ATPase C-terminal domain XDD1_RS10645 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XDD1_RS10650 PF02050 Flagellar FliJ protein XDD1_RS10655 PF02120 Flagellar hook-length control protein FliK XDD1_RS10660 PF03748 Flagellar basal body-associated protein FliL XDD1_RS10665 PF02154 Flagellar motor switch protein FliM XDD1_RS10665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XDD1_RS10670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term XDD1_RS10670 PF16973 Flagellar motor switch protein FliN N-terminal XDD1_RS10675 PF04347 Flagellar biosynthesis protein, FliO XDD1_RS10680 PF00813 FliP family XDD1_RS10685 PF01313 Bacterial export proteins, family 3 XDD1_RS10690 PF01311 Bacterial export proteins, family 1 XDD1_RS10715 PF12728 Helix-turn-helix domain XDD1_RS10720 PF00669 Bacterial flagellin N-terminal helical region XDD1_RS10725 PF00460 Flagella basal body rod protein XDD1_RS10725 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XDD1_RS10730 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase XDD1_RS10730 PF10135 Rod binding protein XDD1_RS10735 PF02119 Flagellar P-ring protein XDD1_RS10740 PF02107 Flagellar L-ring protein XDD1_RS10745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XDD1_RS10745 PF00460 Flagella basal body rod protein XDD1_RS10750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XDD1_RS10750 PF00460 Flagella basal body rod protein XDD1_RS10755 PF07559 Flagellar basal body protein FlaE XDD1_RS10755 PF00460 Flagella basal body rod protein XDD1_RS10755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XDD1_RS10760 PF13861 FlgD Tudor-like domain XDD1_RS10760 PF13860 FlgD Ig-like domain XDD1_RS10760 PF03963 Flagellar hook capping protein - N-terminal region XDD1_RS10765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal XDD1_RS10765 PF00460 Flagella basal body rod protein XDD1_RS10770 PF00460 Flagella basal body rod protein XDD1_RS10775 PF13144 Chaperone for flagella basal body P-ring formation XDD1_RS10775 PF17656 FlgA N-terminal domain XDD1_RS10780 PF04316 Anti-sigma-28 factor, FlgM XDD1_RS10785 PF05130 FlgN protein XDD1_RS10790 PF13358 DDE superfamily endonuclease XDD1_RS10795 PF00419 Fimbrial protein XDD1_RS10800 PF13953 PapC C-terminal domain XDD1_RS10800 PF00577 Outer membrane usher protein XDD1_RS10800 PF13954 PapC N-terminal domain XDD1_RS10805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XDD1_RS10805 PF02753 Pili assembly chaperone PapD, C-terminal domain XDD1_RS10815 PF13592 Winged helix-turn helix XDD1_RS10815 PF13358 DDE superfamily endonuclease XDD1_RS10830 PF00771 FHIPEP family XDD1_RS10835 PF01312 FlhB HrpN YscU SpaS Family XDD1_RS10840 PF01235 Sodium:alanine symporter family XDD1_RS10845 PF02796 Helix-turn-helix domain of resolvase XDD1_RS10845 PF00239 Resolvase, N terminal domain XDD1_RS10855 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS10885 PF00561 alpha/beta hydrolase fold XDD1_RS10890 PF04344 Chemotaxis phosphatase, CheZ XDD1_RS10895 PF00072 Response regulator receiver domain XDD1_RS10900 PF01339 CheB methylesterase XDD1_RS10900 PF00072 Response regulator receiver domain XDD1_RS10905 PF03705 CheR methyltransferase, all-alpha domain XDD1_RS10905 PF01739 CheR methyltransferase, SAM binding domain XDD1_RS10910 PF00672 HAMP domain XDD1_RS10910 PF02203 Tar ligand binding domain homologue XDD1_RS10910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XDD1_RS10915 PF00672 HAMP domain XDD1_RS10915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XDD1_RS10915 PF02203 Tar ligand binding domain homologue XDD1_RS10920 PF01584 CheW-like domain XDD1_RS10925 PF01627 Hpt domain XDD1_RS10925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS10925 PF01584 CheW-like domain XDD1_RS10925 PF09078 CheY binding XDD1_RS10925 PF02895 Signal transducing histidine kinase, homodimeric domain XDD1_RS10930 PF13677 Membrane MotB of proton-channel complex MotA/MotB XDD1_RS10930 PF00691 OmpA family XDD1_RS10935 PF01618 MotA/TolQ/ExbB proton channel family XDD1_RS10940 PF05280 Flagellar transcriptional activator (FlhC) XDD1_RS10945 PF05247 Flagellar transcriptional activator (FlhD) XDD1_RS10950 PF00689 Cation transporting ATPase, C-terminus XDD1_RS10950 PF00690 Cation transporter/ATPase, N-terminus XDD1_RS10955 PF02308 MgtC family XDD1_RS10960 PF00313 'Cold-shock' DNA-binding domain XDD1_RS10965 PF10777 Inner membrane protein YlaC XDD1_RS10990 PF01979 Amidohydrolase family XDD1_RS10995 PF13991 BssS protein family XDD1_RS11000 PF00072 Response regulator receiver domain XDD1_RS11000 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS11005 PF00581 Rhodanese-like domain XDD1_RS11005 PF17773 UPF0176 acylphosphatase like domain XDD1_RS11005 PF12368 Rhodanase C-terminal XDD1_RS11020 PF02508 Rnf-Nqr subunit, membrane protein XDD1_RS11025 PF02540 NAD synthase XDD1_RS11025 PF00958 GMP synthase C terminal domain XDD1_RS11025 PF00117 Glutamine amidotransferase class-I XDD1_RS11030 PF00478 IMP dehydrogenase / GMP reductase domain XDD1_RS11030 PF00571 CBS domain XDD1_RS11035 PF13742 OB-fold nucleic acid binding domain XDD1_RS11035 PF02601 Exonuclease VII, large subunit XDD1_RS11055 PF13358 DDE superfamily endonuclease XDD1_RS11055 PF13592 Winged helix-turn helix XDD1_RS11060 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS11060 PF00593 TonB dependent receptor XDD1_RS11065 PF00326 Prolyl oligopeptidase family XDD1_RS11065 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XDD1_RS11080 PF00390 Malic enzyme, N-terminal domain XDD1_RS11080 PF01515 Phosphate acetyl/butaryl transferase XDD1_RS11080 PF03949 Malic enzyme, NAD binding domain XDD1_RS11095 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS11095 PF00072 Response regulator receiver domain XDD1_RS11100 PF03960 ArsC family XDD1_RS11105 PF01546 Peptidase family M20/M25/M40 XDD1_RS11105 PF07687 Peptidase dimerisation domain XDD1_RS11110 PF02557 D-alanyl-D-alanine carboxypeptidase XDD1_RS11115 PF13980 Uncharacterised protein family (UPF0370) XDD1_RS11120 PF08351 Domain of unknown function (DUF1726) XDD1_RS11120 PF13718 GNAT acetyltransferase 2 XDD1_RS11120 PF17176 tRNA-binding domain XDD1_RS11120 PF05127 Helicase XDD1_RS11125 PF04284 Protein of unknown function (DUF441) XDD1_RS11130 PF01259 SAICAR synthetase XDD1_RS11135 PF06804 NlpB/DapX lipoprotein XDD1_RS11140 PF00701 Dihydrodipicolinate synthetase family XDD1_RS11145 PF01842 ACT domain XDD1_RS11160 PF00578 AhpC/TSA family XDD1_RS11165 PF01594 AI-2E family transporter XDD1_RS11170 PF07720 Tetratricopeptide repeat XDD1_RS11170 PF01435 Peptidase family M48 XDD1_RS11175 PF03960 ArsC family XDD1_RS11180 PF00308 Bacterial dnaA protein XDD1_RS11190 PF00860 Permease family XDD1_RS11200 PF00586 AIR synthase related protein, N-terminal domain XDD1_RS11200 PF02769 AIR synthase related protein, C-terminal domain XDD1_RS11205 PF00551 Formyl transferase XDD1_RS11210 PF13302 Acetyltransferase (GNAT) domain XDD1_RS11215 PF13089 Polyphosphate kinase N-terminal domain XDD1_RS11215 PF17941 Polyphosphate kinase C-terminal domain 1 XDD1_RS11215 PF13090 Polyphosphate kinase C-terminal domain 2 XDD1_RS11215 PF02503 Polyphosphate kinase middle domain XDD1_RS11220 PF02541 Ppx/GppA phosphatase family XDD1_RS11225 PF03448 MgtE intracellular N domain XDD1_RS11225 PF00571 CBS domain XDD1_RS11225 PF01769 Divalent cation transporter XDD1_RS11235 PF00117 Glutamine amidotransferase class-I XDD1_RS11235 PF00425 chorismate binding enzyme XDD1_RS11240 PF00857 Isochorismatase family XDD1_RS11245 PF00106 short chain dehydrogenase XDD1_RS11260 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family XDD1_RS11270 PF05114 Protein of unknown function (DUF692) XDD1_RS11295 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS11295 PF00501 AMP-binding enzyme XDD1_RS11300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XDD1_RS11305 PF00873 AcrB/AcrD/AcrF family XDD1_RS11310 PF00873 AcrB/AcrD/AcrF family XDD1_RS11315 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS11315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS11315 PF00672 HAMP domain XDD1_RS11320 PF00072 Response regulator receiver domain XDD1_RS11320 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS11325 PF07690 Major Facilitator Superfamily XDD1_RS11330 PF07411 Domain of unknown function (DUF1508) XDD1_RS11335 PF01136 Peptidase family U32 XDD1_RS11335 PF16325 Peptidase family U32 C-terminal domain XDD1_RS11340 PF01791 DeoC/LacD family aldolase XDD1_RS11345 PF08543 Phosphomethylpyrimidine kinase XDD1_RS11350 PF00313 'Cold-shock' DNA-binding domain XDD1_RS11355 PF00324 Amino acid permease XDD1_RS11365 PF01510 N-acetylmuramoyl-L-alanine amidase XDD1_RS11370 PF01235 Sodium:alanine symporter family XDD1_RS11390 PF00180 Isocitrate/isopropylmalate dehydrogenase XDD1_RS11395 PF00849 RNA pseudouridylate synthase XDD1_RS11400 PF00293 NUDIX domain XDD1_RS11410 PF04356 Protein of unknown function (DUF489) XDD1_RS11415 PF00206 Lyase XDD1_RS11415 PF08328 Adenylosuccinate lyase C-terminal XDD1_RS11420 PF13358 DDE superfamily endonuclease XDD1_RS11425 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS11425 PF00072 Response regulator receiver domain XDD1_RS11430 PF08918 PhoQ Sensor XDD1_RS11430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS11435 PF08007 Cupin superfamily protein XDD1_RS11440 PF07687 Peptidase dimerisation domain XDD1_RS11440 PF01546 Peptidase family M20/M25/M40 XDD1_RS11445 PF02146 Sir2 family XDD1_RS11450 PF02687 FtsX-like permease family XDD1_RS11450 PF12704 MacB-like periplasmic core domain XDD1_RS11455 PF00005 ABC transporter XDD1_RS11460 PF02687 FtsX-like permease family XDD1_RS11460 PF12704 MacB-like periplasmic core domain XDD1_RS11465 PF00271 Helicase conserved C-terminal domain XDD1_RS11465 PF17757 UvrB interaction domain XDD1_RS11465 PF03461 TRCF domain XDD1_RS11465 PF02559 CarD-like/TRCF domain XDD1_RS11465 PF00270 DEAD/DEAH box helicase XDD1_RS11475 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS11480 PF00933 Glycosyl hydrolase family 3 N terminal domain XDD1_RS11485 PF01636 Phosphotransferase enzyme family XDD1_RS11490 PF13036 Peptidoglycan-synthase activator LpoB XDD1_RS11495 PF01230 HIT domain XDD1_RS11500 PF01026 TatD related DNase XDD1_RS11505 PF09115 DNA polymerase III, delta subunit, C terminal XDD1_RS11510 PF02223 Thymidylate kinase XDD1_RS11515 PF02618 YceG-like family XDD1_RS11520 PF01063 Amino-transferase class IV XDD1_RS11525 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS11525 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS11530 PF00550 Phosphopantetheine attachment site XDD1_RS11540 PF00698 Acyl transferase domain XDD1_RS11545 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XDD1_RS11545 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XDD1_RS11550 PF02504 Fatty acid synthesis protein XDD1_RS11555 PF01783 Ribosomal L32p protein family XDD1_RS11560 PF02620 Large ribosomal RNA subunit accumulation protein YceD XDD1_RS11565 PF02545 Maf-like protein XDD1_RS11570 PF01479 S4 domain XDD1_RS11570 PF00849 RNA pseudouridylate synthase XDD1_RS11575 PF12111 Polyribonucleotide phosphorylase C terminal XDD1_RS11575 PF10150 Ribonuclease E/G family XDD1_RS11575 PF00575 S1 RNA binding domain XDD1_RS11580 PF13460 NAD(P)H-binding XDD1_RS11585 PF04363 Protein of unknown function (DUF496) XDD1_RS11590 PF00929 Exonuclease XDD1_RS11590 PF08411 Exonuclease C-terminal XDD1_RS11595 PF01565 FAD binding domain XDD1_RS11595 PF09330 D-lactate dehydrogenase, membrane binding XDD1_RS11600 PF13520 Amino acid permease XDD1_RS11605 PF00593 TonB dependent receptor XDD1_RS11605 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS11610 PF00005 ABC transporter XDD1_RS11610 PF08402 TOBE domain XDD1_RS11615 PF01032 FecCD transport family XDD1_RS11625 PF00324 Amino acid permease XDD1_RS11630 PF03466 LysR substrate binding domain XDD1_RS11630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS11635 PF03601 Conserved hypothetical protein 698 XDD1_RS11640 PF01261 Xylose isomerase-like TIM barrel XDD1_RS11645 PF00294 pfkB family carbohydrate kinase XDD1_RS11650 PF00293 NUDIX domain XDD1_RS11650 PF09297 NADH pyrophosphatase zinc ribbon domain XDD1_RS11650 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain XDD1_RS11655 PF03222 Tryptophan/tyrosine permease family XDD1_RS11660 PF09285 Elongation factor P, C-terminal XDD1_RS11660 PF01132 Elongation factor P (EF-P) OB domain XDD1_RS11660 PF08207 Elongation factor P (EF-P) KOW-like domain XDD1_RS11675 PF01569 PAP2 superfamily XDD1_RS11680 PF00877 NlpC/P60 family XDD1_RS11685 PF13989 YejG-like protein XDD1_RS11690 PF07690 Major Facilitator Superfamily XDD1_RS11695 PF00849 RNA pseudouridylate synthase XDD1_RS11695 PF01479 S4 domain XDD1_RS11700 PF00271 Helicase conserved C-terminal domain XDD1_RS11700 PF04851 Type III restriction enzyme, res subunit XDD1_RS11705 PF01386 Ribosomal L25p family XDD1_RS11710 PF04245 37-kD nucleoid-associated bacterial protein XDD1_RS11715 PF07208 Protein of unknown function (DUF1414) XDD1_RS11720 PF11893 Domain of unknown function (DUF3413) XDD1_RS11720 PF00884 Sulfatase XDD1_RS11730 PF13358 DDE superfamily endonuclease XDD1_RS11745 PF02522 Aminoglycoside 3-N-acetyltransferase XDD1_RS11750 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading XDD1_RS11750 PF18416 N-acetylglucosamine binding protein domain 2 XDD1_RS11755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XDD1_RS11770 PF01510 N-acetylmuramoyl-L-alanine amidase XDD1_RS11775 PF00111 2Fe-2S iron-sulfur cluster binding domain XDD1_RS11780 PF00268 Ribonucleotide reductase, small chain XDD1_RS11785 PF03477 ATP cone domain XDD1_RS11785 PF02867 Ribonucleotide reductase, barrel domain XDD1_RS11785 PF00317 Ribonucleotide reductase, all-alpha domain XDD1_RS11795 PF03989 DNA gyrase C-terminal domain, beta-propeller XDD1_RS11795 PF00521 DNA gyrase/topoisomerase IV, subunit A XDD1_RS11800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS11800 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS11800 PF09456 RcsC Alpha-Beta-Loop (ABL) XDD1_RS11800 PF00072 Response regulator receiver domain XDD1_RS11805 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS11805 PF00072 Response regulator receiver domain XDD1_RS11810 PF16359 RcsD-ABL domain XDD1_RS11810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS11810 PF01627 Hpt domain XDD1_RS11825 PF03222 Tryptophan/tyrosine permease family XDD1_RS11830 PF07437 YfaZ precursor XDD1_RS11835 PF00501 AMP-binding enzyme XDD1_RS11835 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS11840 PF13378 Enolase C-terminal domain-like XDD1_RS11845 PF00378 Enoyl-CoA hydratase/isomerase XDD1_RS11850 PF12697 Alpha/beta hydrolase family XDD1_RS11855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XDD1_RS11855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XDD1_RS11855 PF16582 Middle domain of thiamine pyrophosphate XDD1_RS11860 PF00425 chorismate binding enzyme XDD1_RS11870 PF01522 Polysaccharide deacetylase XDD1_RS11870 PF14883 Hypothetical glycosyl hydrolase family 13 XDD1_RS11875 PF00535 Glycosyl transferase family 2 XDD1_RS11885 PF13689 YfiR/HmsC-like XDD1_RS11890 PF00990 Diguanylate cyclase, GGDEF domain XDD1_RS11890 PF17152 Periplasmic sensor domain XDD1_RS11895 PF00691 OmpA family XDD1_RS11900 PF12792 CSS motif domain associated with EAL XDD1_RS11900 PF00563 EAL domain XDD1_RS11910 PF02028 BCCT, betaine/carnitine/choline family transporter XDD1_RS11915 PF00361 Proton-conducting membrane transporter XDD1_RS11920 PF00361 Proton-conducting membrane transporter XDD1_RS11925 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XDD1_RS11925 PF00361 Proton-conducting membrane transporter XDD1_RS11930 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XDD1_RS11935 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XDD1_RS11940 PF12838 4Fe-4S dicluster domain XDD1_RS11945 PF00146 NADH dehydrogenase XDD1_RS11950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XDD1_RS11950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XDD1_RS11950 PF00384 Molybdopterin oxidoreductase XDD1_RS11950 PF01568 Molydopterin dinucleotide binding domain XDD1_RS11955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XDD1_RS11955 PF10531 SLBB domain XDD1_RS11955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XDD1_RS11965 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XDD1_RS11965 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XDD1_RS11970 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XDD1_RS11975 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XDD1_RS11980 PF03466 LysR substrate binding domain XDD1_RS11980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS11985 PF00155 Aminotransferase class I and II XDD1_RS11990 PF01411 tRNA synthetases class II (A) XDD1_RS11990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XDD1_RS12000 PF03600 Citrate transporter XDD1_RS12000 PF02080 TrkA-C domain XDD1_RS12005 PF13419 Haloacid dehalogenase-like hydrolase XDD1_RS12010 PF04217 Protein of unknown function, DUF412 XDD1_RS12015 PF00871 Acetokinase family XDD1_RS12020 PF07085 DRTGG domain XDD1_RS12020 PF01515 Phosphate acetyl/butaryl transferase XDD1_RS12025 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12025 PF00668 Condensation domain XDD1_RS12025 PF00501 AMP-binding enzyme XDD1_RS12025 PF00550 Phosphopantetheine attachment site XDD1_RS12030 PF13358 DDE superfamily endonuclease XDD1_RS12045 PF17762 HTH domain found in ParB protein XDD1_RS12045 PF02195 ParB-like nuclease domain XDD1_RS12075 PF00589 Phage integrase family XDD1_RS12075 PF14659 Phage integrase, N-terminal SAM-like domain XDD1_RS12075 PF13356 Arm DNA-binding domain XDD1_RS12085 PF04333 MlaA lipoprotein XDD1_RS12090 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XDD1_RS12095 PF04175 Protein of unknown function (DUF406) XDD1_RS12100 PF00108 Thiolase, N-terminal domain XDD1_RS12100 PF02803 Thiolase, C-terminal domain XDD1_RS12105 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XDD1_RS12105 PF00378 Enoyl-CoA hydratase/isomerase XDD1_RS12105 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XDD1_RS12110 PF00300 Histidine phosphatase superfamily (branch 1) XDD1_RS12115 PF01713 Smr domain XDD1_RS12120 PF01979 Amidohydrolase family XDD1_RS12125 PF00491 Arginase family XDD1_RS12130 PF07702 UTRA domain XDD1_RS12130 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS12135 PF01175 Urocanase Rossmann-like domain XDD1_RS12135 PF17392 Urocanase C-terminal domain XDD1_RS12135 PF17391 Urocanase N-terminal domain XDD1_RS12140 PF00221 Aromatic amino acid lyase XDD1_RS12145 PF00324 Amino acid permease XDD1_RS12150 PF05175 Methyltransferase small domain XDD1_RS12155 PF01264 Chorismate synthase XDD1_RS12160 PF01925 Sulfite exporter TauE/SafE XDD1_RS12165 PF04315 Elongation factor P hydroxylase XDD1_RS12170 PF08891 YfcL protein XDD1_RS12180 PF00583 Acetyltransferase (GNAT) family XDD1_RS12185 PF05430 S-adenosyl-L-methionine-dependent methyltransferase XDD1_RS12185 PF01266 FAD dependent oxidoreductase XDD1_RS12190 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS12190 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS12195 PF01970 Tripartite tricarboxylate transporter TctA family XDD1_RS12210 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS12210 PF00072 Response regulator receiver domain XDD1_RS12215 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS12215 PF08521 Two-component sensor kinase N-terminal XDD1_RS12215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS12225 PF12833 Helix-turn-helix domain XDD1_RS12230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XDD1_RS12230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XDD1_RS12230 PF11890 Domain of unknown function (DUF3410) XDD1_RS12235 PF01118 Semialdehyde dehydrogenase, NAD binding domain XDD1_RS12235 PF02774 Semialdehyde dehydrogenase, dimerisation domain XDD1_RS12240 PF01416 tRNA pseudouridine synthase XDD1_RS12245 PF09335 SNARE associated Golgi protein XDD1_RS12250 PF01039 Carboxyl transferase domain XDD1_RS12250 PF17848 Acetyl-coA carboxylase zinc finger domain XDD1_RS12255 PF08245 Mur ligase middle domain XDD1_RS12255 PF02875 Mur ligase family, glutamate ligase domain XDD1_RS12260 PF05036 Sporulation related domain XDD1_RS12265 PF02674 Colicin V production protein XDD1_RS12270 PF00156 Phosphoribosyl transferase domain XDD1_RS12275 PF02441 Flavoprotein XDD1_RS12280 PF08338 Domain of unknown function (DUF1731) XDD1_RS12280 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS12285 PF00043 Glutathione S-transferase, C-terminal domain XDD1_RS12285 PF02798 Glutathione S-transferase, N-terminal domain XDD1_RS12290 PF00293 NUDIX domain XDD1_RS12310 PF00501 AMP-binding enzyme XDD1_RS12310 PF07993 Male sterility protein XDD1_RS12310 PF00550 Phosphopantetheine attachment site XDD1_RS12310 PF00668 Condensation domain XDD1_RS12310 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12315 PF00550 Phosphopantetheine attachment site XDD1_RS12315 PF07993 Male sterility protein XDD1_RS12315 PF00501 AMP-binding enzyme XDD1_RS12315 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12315 PF00668 Condensation domain XDD1_RS12320 PF00664 ABC transporter transmembrane region XDD1_RS12320 PF00005 ABC transporter XDD1_RS12325 PF00202 Aminotransferase class-III XDD1_RS12330 PF04958 Arginine N-succinyltransferase beta subunit XDD1_RS12335 PF00171 Aldehyde dehydrogenase family XDD1_RS12340 PF04996 Succinylarginine dihydrolase XDD1_RS12345 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family XDD1_RS12350 PF00324 Amino acid permease XDD1_RS12370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XDD1_RS12370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XDD1_RS12380 PF00501 AMP-binding enzyme XDD1_RS12380 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12395 PF01494 FAD binding domain XDD1_RS12400 PF07690 Major Facilitator Superfamily XDD1_RS12425 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XDD1_RS12430 PF01636 Phosphotransferase enzyme family XDD1_RS12435 PF01008 Initiation factor 2 subunit family XDD1_RS12440 PF00596 Class II Aldolase and Adducin N-terminal domain XDD1_RS12475 PF00749 tRNA synthetases class I (E and Q), catalytic domain XDD1_RS12495 PF01773 Na+ dependent nucleoside transporter N-terminus XDD1_RS12495 PF07662 Na+ dependent nucleoside transporter C-terminus XDD1_RS12495 PF07670 Nucleoside recognition XDD1_RS12500 PF00533 BRCA1 C Terminus (BRCT) domain XDD1_RS12500 PF01653 NAD-dependent DNA ligase adenylation domain XDD1_RS12500 PF03120 NAD-dependent DNA ligase OB-fold domain XDD1_RS12500 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XDD1_RS12500 PF12826 Helix-hairpin-helix motif XDD1_RS12505 PF04354 ZipA, C-terminal FtsZ-binding domain XDD1_RS12515 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS12520 PF00381 PTS HPr component phosphorylation site XDD1_RS12525 PF02896 PEP-utilising enzyme, TIM barrel domain XDD1_RS12525 PF05524 PEP-utilising enzyme, N-terminal XDD1_RS12525 PF00391 PEP-utilising enzyme, mobile domain XDD1_RS12530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 XDD1_RS12535 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XDD1_RS12535 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XDD1_RS12550 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS12550 PF00698 Acyl transferase domain XDD1_RS12550 PF00668 Condensation domain XDD1_RS12550 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS12550 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS12550 PF00550 Phosphopantetheine attachment site XDD1_RS12555 PF00550 Phosphopantetheine attachment site XDD1_RS12555 PF00501 AMP-binding enzyme XDD1_RS12555 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12555 PF00668 Condensation domain XDD1_RS12560 PF00668 Condensation domain XDD1_RS12560 PF00550 Phosphopantetheine attachment site XDD1_RS12560 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12560 PF00975 Thioesterase domain XDD1_RS12560 PF00501 AMP-binding enzyme XDD1_RS12565 PF00144 Beta-lactamase XDD1_RS12570 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS12570 PF00550 Phosphopantetheine attachment site XDD1_RS12570 PF00668 Condensation domain XDD1_RS12570 PF00698 Acyl transferase domain XDD1_RS12570 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS12570 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS12575 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12575 PF00501 AMP-binding enzyme XDD1_RS12575 PF00550 Phosphopantetheine attachment site XDD1_RS12575 PF00668 Condensation domain XDD1_RS12585 PF00501 AMP-binding enzyme XDD1_RS12585 PF00668 Condensation domain XDD1_RS12585 PF00202 Aminotransferase class-III XDD1_RS12585 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS12585 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12585 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS12585 PF00550 Phosphopantetheine attachment site XDD1_RS12585 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS12590 PF00975 Thioesterase domain XDD1_RS12590 PF00550 Phosphopantetheine attachment site XDD1_RS12590 PF00668 Condensation domain XDD1_RS12590 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS12590 PF00501 AMP-binding enzyme XDD1_RS12595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain XDD1_RS12595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain XDD1_RS12595 PF02770 Acyl-CoA dehydrogenase, middle domain XDD1_RS12600 PF00550 Phosphopantetheine attachment site XDD1_RS12605 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS12620 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS12625 PF00005 ABC transporter XDD1_RS12625 PF08402 TOBE domain XDD1_RS12630 PF03009 Glycerophosphoryl diester phosphodiesterase family XDD1_RS12650 PF00005 ABC transporter XDD1_RS12655 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS12660 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS12665 PF06572 Protein of unknown function (DUF1131) XDD1_RS12675 PF00583 Acetyltransferase (GNAT) family XDD1_RS12750 PF03354 Phage Terminase XDD1_RS12760 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS12765 PF01218 Coproporphyrinogen III oxidase XDD1_RS12770 PF16485 Protealysin propeptide XDD1_RS12770 PF02868 Thermolysin metallopeptidase, alpha-helical domain XDD1_RS12770 PF01447 Thermolysin metallopeptidase, catalytic domain XDD1_RS12775 PF01447 Thermolysin metallopeptidase, catalytic domain XDD1_RS12775 PF16485 Protealysin propeptide XDD1_RS12775 PF02868 Thermolysin metallopeptidase, alpha-helical domain XDD1_RS12790 PF02868 Thermolysin metallopeptidase, alpha-helical domain XDD1_RS12790 PF16485 Protealysin propeptide XDD1_RS12790 PF01447 Thermolysin metallopeptidase, catalytic domain XDD1_RS12800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XDD1_RS12800 PF01926 50S ribosome-binding GTPase XDD1_RS12805 PF13360 PQQ-like domain XDD1_RS12810 PF09976 Tetratricopeptide repeat-like domain XDD1_RS12815 PF03129 Anticodon binding domain XDD1_RS12815 PF13393 Histidyl-tRNA synthetase XDD1_RS12820 PF04551 GcpE protein XDD1_RS12825 PF13464 Domain of unknown function (DUF4115) XDD1_RS12835 PF04055 Radical SAM superfamily XDD1_RS12840 PF00334 Nucleoside diphosphate kinase XDD1_RS12845 PF13443 Cro/C1-type HTH DNA-binding domain XDD1_RS12855 PF06832 Penicillin-Binding Protein C-terminus Family XDD1_RS12855 PF00912 Transglycosylase XDD1_RS12855 PF00905 Penicillin binding protein transpeptidase domain XDD1_RS12860 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XDD1_RS12860 PF07703 Alpha-2-macroglobulin bait region domain XDD1_RS12860 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XDD1_RS12860 PF00207 Alpha-2-macroglobulin family XDD1_RS12860 PF07678 A-macroglobulin TED domain XDD1_RS12860 PF01835 MG2 domain XDD1_RS12860 PF17962 Bacterial macroglobulin domain 6 XDD1_RS12860 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XDD1_RS12860 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XDD1_RS12870 PF12404 Peptidase XDD1_RS12870 PF00883 Cytosol aminopeptidase family, catalytic domain XDD1_RS12875 PF04384 Iron-sulphur cluster assembly XDD1_RS12880 PF00111 2Fe-2S iron-sulfur cluster binding domain XDD1_RS12885 PF00012 Hsp70 protein XDD1_RS12890 PF07743 HSCB C-terminal oligomerisation domain XDD1_RS12895 PF01521 Iron-sulphur cluster biosynthesis XDD1_RS12900 PF01592 NifU-like N terminal domain XDD1_RS12905 PF00266 Aminotransferase class-V XDD1_RS12910 PF02082 Transcriptional regulator XDD1_RS12915 PF00588 SpoU rRNA Methylase family XDD1_RS12920 PF00459 Inositol monophosphatase family XDD1_RS12925 PF12832 MFS_1 like family XDD1_RS12930 PF00464 Serine hydroxymethyltransferase XDD1_RS12935 PF00970 Oxidoreductase FAD-binding domain XDD1_RS12935 PF00175 Oxidoreductase NAD-binding domain XDD1_RS12935 PF00042 Globin XDD1_RS12940 PF00543 Nitrogen regulatory protein P-II XDD1_RS12945 PF02540 NAD synthase XDD1_RS12945 PF00795 Carbon-nitrogen hydrolase XDD1_RS12950 PF00158 Sigma-54 interaction domain XDD1_RS12950 PF00072 Response regulator receiver domain XDD1_RS12955 PF13942 YfhG lipoprotein XDD1_RS12960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS12960 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS12965 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XDD1_RS12965 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XDD1_RS12965 PF02769 AIR synthase related protein, C-terminal domain XDD1_RS12970 PF00497 Bacterial extracellular solute-binding proteins, family 3 XDD1_RS12970 PF01464 Transglycosylase SLT domain XDD1_RS12975 PF14437 MafB19-like deaminase XDD1_RS12980 PF01966 HD domain XDD1_RS12985 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain XDD1_RS12985 PF00730 HhH-GPD superfamily base excision DNA repair protein XDD1_RS12995 PF12838 4Fe-4S dicluster domain XDD1_RS13000 PF01648 4'-phosphopantetheinyl transferase superfamily XDD1_RS13005 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XDD1_RS13010 PF02565 Recombination protein O C terminal XDD1_RS13010 PF11967 Recombination protein O N terminal XDD1_RS13015 PF07650 KH domain XDD1_RS13015 PF01926 50S ribosome-binding GTPase XDD1_RS13020 PF00035 Double-stranded RNA binding motif XDD1_RS13020 PF14622 Ribonuclease-III-like XDD1_RS13025 PF10502 Signal peptidase, peptidase S26 XDD1_RS13030 PF00679 Elongation factor G C-terminus XDD1_RS13030 PF06421 GTP-binding protein LepA C-terminus XDD1_RS13030 PF00009 Elongation factor Tu GTP binding domain XDD1_RS13030 PF03144 Elongation factor Tu domain 2 XDD1_RS13040 PF17188 MucB/RseB C-terminal domain XDD1_RS13040 PF03888 MucB/RseB N-terminal domain XDD1_RS13045 PF03872 Anti sigma-E protein RseA, N-terminal domain XDD1_RS13045 PF03873 Anti sigma-E protein RseA, C-terminal domain XDD1_RS13050 PF04542 Sigma-70 region 2 XDD1_RS13050 PF08281 Sigma-70, region 4 XDD1_RS13055 PF05175 Methyltransferase small domain XDD1_RS13060 PF00271 Helicase conserved C-terminal domain XDD1_RS13060 PF00270 DEAD/DEAH box helicase XDD1_RS13070 PF01228 Glycine radical XDD1_RS13075 PF03167 Uracil DNA glycosylase superfamily XDD1_RS13080 PF01025 GrpE XDD1_RS13085 PF01513 ATP-NAD kinase XDD1_RS13090 PF02463 RecF/RecN/SMC N terminal domain XDD1_RS13095 PF04355 SmpA / OmlA family XDD1_RS13100 PF03658 RnfH family Ubiquitin XDD1_RS13105 PF03364 Polyketide cyclase / dehydrase and lipid transport XDD1_RS13110 PF01668 SmpB protein XDD1_RS13130 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XDD1_RS13240 PF05840 Bacteriophage replication gene A protein (GPA) XDD1_RS13260 PF17282 Family of unknown function (DUF5347) XDD1_RS13275 PF16452 Bacteriophage CI repressor C-terminal domain XDD1_RS13275 PF07022 Bacteriophage CI repressor helix-turn-helix domain XDD1_RS13280 PF00589 Phage integrase family XDD1_RS13280 PF02899 Phage integrase, N-terminal SAM-like domain XDD1_RS13290 PF13358 DDE superfamily endonuclease XDD1_RS13305 PF00302 Chloramphenicol acetyltransferase XDD1_RS13310 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS13320 PF06506 Propionate catabolism activator XDD1_RS13320 PF00158 Sigma-54 interaction domain XDD1_RS13320 PF02954 Bacterial regulatory protein, Fis family XDD1_RS13330 PF00285 Citrate synthase, C-terminal domain XDD1_RS13335 PF03972 MmgE/PrpD family XDD1_RS13340 PF00501 AMP-binding enzyme XDD1_RS13340 PF16177 Acetyl-coenzyme A synthetase N-terminus XDD1_RS13340 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS13350 PF13417 Glutathione S-transferase, N-terminal domain XDD1_RS13350 PF00043 Glutathione S-transferase, C-terminal domain XDD1_RS13355 PF01292 Prokaryotic cytochrome b561 XDD1_RS13360 PF04264 YceI-like domain XDD1_RS13365 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase XDD1_RS13380 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS13385 PF07690 Major Facilitator Superfamily XDD1_RS13395 PF00230 Major intrinsic protein XDD1_RS13400 PF03974 Ecotin XDD1_RS13405 PF04325 Protein of unknown function (DUF465) XDD1_RS13410 PF04606 Ogr/Delta-like zinc finger XDD1_RS13440 PF04984 Phage tail sheath protein subtilisin-like domain XDD1_RS13440 PF17482 Phage tail sheath C-terminal domain XDD1_RS13450 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XDD1_RS13500 PF05840 Bacteriophage replication gene A protein (GPA) XDD1_RS13505 PF17282 Family of unknown function (DUF5347) XDD1_RS13510 PF07022 Bacteriophage CI repressor helix-turn-helix domain XDD1_RS13510 PF16452 Bacteriophage CI repressor C-terminal domain XDD1_RS13540 PF12833 Helix-turn-helix domain XDD1_RS13545 PF02677 Epoxyqueuosine reductase QueH XDD1_RS13555 PF00501 AMP-binding enzyme XDD1_RS13555 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS13570 PF01588 Putative tRNA binding domain XDD1_RS13575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XDD1_RS13590 PF00294 pfkB family carbohydrate kinase XDD1_RS13625 PF02384 N-6 DNA Methylase XDD1_RS13630 PF01420 Type I restriction modification DNA specificity domain XDD1_RS13645 PF00152 tRNA synthetases class II (D, K and N) XDD1_RS13645 PF01336 OB-fold nucleic acid binding domain XDD1_RS13650 PF03462 PCRF domain XDD1_RS13650 PF00472 RF-1 domain XDD1_RS13655 PF01368 DHH family XDD1_RS13655 PF02272 DHHA1 domain XDD1_RS13655 PF17768 RecJ OB domain XDD1_RS13660 PF10411 Disulfide bond isomerase protein N-terminus XDD1_RS13660 PF13098 Thioredoxin-like domain XDD1_RS13665 PF00589 Phage integrase family XDD1_RS13665 PF02899 Phage integrase, N-terminal SAM-like domain XDD1_RS13670 PF00258 Flavodoxin XDD1_RS13675 PF03937 Flavinator of succinate dehydrogenase XDD1_RS13680 PF01571 Aminomethyltransferase folate-binding domain XDD1_RS13690 PF03594 Benzoate membrane transport protein XDD1_RS13695 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS13695 PF00155 Aminotransferase class I and II XDD1_RS13700 PF00155 Aminotransferase class I and II XDD1_RS13710 PF13358 DDE superfamily endonuclease XDD1_RS13715 PF00155 Aminotransferase class I and II XDD1_RS13720 PF07690 Major Facilitator Superfamily XDD1_RS13730 PF02543 Carbamoyltransferase N-terminus XDD1_RS13730 PF16861 Carbamoyltransferase C-terminus XDD1_RS13740 PF02347 Glycine cleavage system P-protein XDD1_RS13745 PF01597 Glycine cleavage H-protein XDD1_RS13750 PF01571 Aminomethyltransferase folate-binding domain XDD1_RS13750 PF08669 Glycine cleavage T-protein C-terminal barrel domain XDD1_RS13755 PF01494 FAD binding domain XDD1_RS13760 PF01494 FAD binding domain XDD1_RS13765 PF05195 Aminopeptidase P, N-terminal domain XDD1_RS13765 PF00557 Metallopeptidase family M24 XDD1_RS13770 PF03695 Uncharacterised protein family (UPF0149) XDD1_RS13775 PF05164 Cell division protein ZapA XDD1_RS13780 PF01812 5-formyltetrahydrofolate cyclo-ligase family XDD1_RS13785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XDD1_RS13785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XDD1_RS13785 PF01842 ACT domain XDD1_RS13790 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XDD1_RS13795 PF03466 LysR substrate binding domain XDD1_RS13795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS13800 PF04402 Protein of unknown function (DUF541) XDD1_RS13805 PF01810 LysE type translocator XDD1_RS13810 PF00924 Mechanosensitive ion channel XDD1_RS13810 PF05552 Conserved TM helix XDD1_RS13815 PF06062 Uncharacterised protein family (UPF0231) XDD1_RS13820 PF00330 Aconitase family (aconitate hydratase) XDD1_RS13820 PF06434 Aconitate hydratase 2 N-terminus XDD1_RS13820 PF11791 Aconitate B N-terminal domain XDD1_RS13835 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS13835 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XDD1_RS13840 PF00364 Biotin-requiring enzyme XDD1_RS13840 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XDD1_RS13840 PF02817 e3 binding domain XDD1_RS13845 PF17831 Pyruvate dehydrogenase E1 component middle domain XDD1_RS13845 PF00456 Transketolase, thiamine diphosphate binding domain XDD1_RS13850 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS13850 PF07729 FCD domain XDD1_RS13860 PF17113 Regulatory signalling modulator protein AmpE XDD1_RS13865 PF01510 N-acetylmuramoyl-L-alanine amidase XDD1_RS13870 PF07963 Prokaryotic N-terminal methylation motif XDD1_RS13875 PF00437 Type II/IV secretion system protein XDD1_RS13875 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XDD1_RS13880 PF00482 Type II secretion system (T2SS), protein F XDD1_RS13885 PF01121 Dephospho-CoA kinase XDD1_RS13890 PF07072 Cell division protein XDD1_RS13895 PF03884 DNA gyrase inhibitor YacG XDD1_RS13900 PF00293 NUDIX domain XDD1_RS13905 PF07516 SecA Wing and Scaffold domain XDD1_RS13905 PF01043 SecA preprotein cross-linking domain XDD1_RS13905 PF07517 SecA DEAD-like domain XDD1_RS13905 PF02810 SEC-C motif XDD1_RS13910 PF06558 Secretion monitor precursor protein (SecM) XDD1_RS13920 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XDD1_RS13925 PF00091 Tubulin/FtsZ family, GTPase domain XDD1_RS13925 PF12327 FtsZ family, C-terminal domain XDD1_RS13930 PF02491 SHS2 domain inserted in FTSA XDD1_RS13935 PF03799 Cell division protein FtsQ XDD1_RS13935 PF08478 POTRA domain, FtsQ-type XDD1_RS13940 PF01820 D-ala D-ala ligase N-terminus XDD1_RS13940 PF07478 D-ala D-ala ligase C-terminus XDD1_RS13945 PF01225 Mur ligase family, catalytic domain XDD1_RS13945 PF08245 Mur ligase middle domain XDD1_RS13945 PF02875 Mur ligase family, glutamate ligase domain XDD1_RS13950 PF03033 Glycosyltransferase family 28 N-terminal domain XDD1_RS13950 PF04101 Glycosyltransferase family 28 C-terminal domain XDD1_RS13955 PF01098 Cell cycle protein XDD1_RS13960 PF02875 Mur ligase family, glutamate ligase domain XDD1_RS13960 PF08245 Mur ligase middle domain XDD1_RS13965 PF00953 Glycosyl transferase family 4 XDD1_RS13965 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 XDD1_RS13970 PF01225 Mur ligase family, catalytic domain XDD1_RS13970 PF02875 Mur ligase family, glutamate ligase domain XDD1_RS13970 PF08245 Mur ligase middle domain XDD1_RS13975 PF08245 Mur ligase middle domain XDD1_RS13975 PF01225 Mur ligase family, catalytic domain XDD1_RS13975 PF02875 Mur ligase family, glutamate ligase domain XDD1_RS13980 PF00905 Penicillin binding protein transpeptidase domain XDD1_RS13980 PF03717 Penicillin-binding Protein dimerisation domain XDD1_RS13985 PF04999 Cell division protein FtsL XDD1_RS13990 PF01795 MraW methylase family XDD1_RS13995 PF02381 MraZ protein, putative antitoxin-like XDD1_RS14000 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family XDD1_RS14000 PF00356 Bacterial regulatory proteins, lacI family XDD1_RS14005 PF10369 Small subunit of acetolactate synthase XDD1_RS14010 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XDD1_RS14010 PF00205 Thiamine pyrophosphate enzyme, central domain XDD1_RS14010 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XDD1_RS14015 PF00501 AMP-binding enzyme XDD1_RS14020 PF03466 LysR substrate binding domain XDD1_RS14020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS14025 PF08502 LeuA allosteric (dimerisation) domain XDD1_RS14025 PF00682 HMGL-like XDD1_RS14030 PF00180 Isocitrate/isopropylmalate dehydrogenase XDD1_RS14035 PF02976 DNA mismatch repair enzyme MutH XDD1_RS14045 PF01327 Polypeptide deformylase XDD1_RS14050 PF01053 Cys/Met metabolism PLP-dependent enzyme XDD1_RS14055 PF00571 CBS domain XDD1_RS14055 PF00291 Pyridoxal-phosphate dependent enzyme XDD1_RS14090 PF08402 TOBE domain XDD1_RS14090 PF00005 ABC transporter XDD1_RS14095 PF01554 MatE XDD1_RS14100 PF05643 Putative bacterial lipoprotein (DUF799) XDD1_RS14110 PF03783 Curli production assembly/transport component CsgG XDD1_RS14120 PF00589 Phage integrase family XDD1_RS14125 PF02492 CobW/HypB/UreG, nucleotide-binding domain XDD1_RS14125 PF07683 Cobalamin synthesis protein cobW C-terminal domain XDD1_RS14130 PF04328 Selenoprotein, putative XDD1_RS14135 PF13722 5TM C-terminal transporter carbon starvation CstA XDD1_RS14135 PF02554 Carbon starvation protein CstA XDD1_RS14140 PF00884 Sulfatase XDD1_RS14150 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS14165 PF07690 Major Facilitator Superfamily XDD1_RS14170 PF05231 MASE1 XDD1_RS14170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS14170 PF07730 Histidine kinase XDD1_RS14175 PF00072 Response regulator receiver domain XDD1_RS14175 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS14185 PF02675 S-adenosylmethionine decarboxylase XDD1_RS14190 PF17284 Spermidine synthase tetramerisation domain XDD1_RS14210 PF13358 DDE superfamily endonuclease XDD1_RS14225 PF05638 Type VI secretion system effector, Hcp XDD1_RS14270 PF03354 Phage Terminase XDD1_RS14285 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS14290 PF17284 Spermidine synthase tetramerisation domain XDD1_RS14295 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) XDD1_RS14300 PF00156 Phosphoribosyl transferase domain XDD1_RS14305 PF00484 Carbonic anhydrase XDD1_RS14310 PF00005 ABC transporter XDD1_RS14315 PF01061 ABC-2 type transporter XDD1_RS14320 PF02569 Pantoate-beta-alanine ligase XDD1_RS14325 PF02548 Ketopantoate hydroxymethyltransferase XDD1_RS14330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XDD1_RS14335 PF01743 Poly A polymerase head domain XDD1_RS14335 PF12626 Polymerase A arginine-rich C-terminus XDD1_RS14335 PF12627 Probable RNA and SrmB- binding site of polymerase A XDD1_RS14340 PF00749 tRNA synthetases class I (E and Q), catalytic domain XDD1_RS14345 PF01258 Prokaryotic dksA/traR C4-type zinc finger XDD1_RS14350 PF03749 Sugar fermentation stimulation protein RE domain XDD1_RS14350 PF17746 SfsA N-terminal OB domain XDD1_RS14355 PF00270 DEAD/DEAH box helicase XDD1_RS14355 PF08482 ATP-dependent helicase C-terminal XDD1_RS14355 PF00271 Helicase conserved C-terminal domain XDD1_RS14355 PF04408 Helicase associated domain (HA2) XDD1_RS14360 PF14814 Bifunctional transglycosylase second domain XDD1_RS14360 PF00905 Penicillin binding protein transpeptidase domain XDD1_RS14360 PF00912 Transglycosylase XDD1_RS14360 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal XDD1_RS14390 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS14395 PF00202 Aminotransferase class-III XDD1_RS14400 PF01521 Iron-sulphur cluster biosynthesis XDD1_RS14405 PF01497 Periplasmic binding protein XDD1_RS14410 PF01048 Phosphorylase superfamily XDD1_RS14415 PF01966 HD domain XDD1_RS14415 PF13286 Phosphohydrolase-associated domain XDD1_RS14420 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS14420 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) XDD1_RS14420 PF00672 HAMP domain XDD1_RS14420 PF00072 Response regulator receiver domain XDD1_RS14420 PF01627 Hpt domain XDD1_RS14420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS14425 PF05958 tRNA (Uracil-5-)-methyltransferase XDD1_RS14425 PF01938 TRAM domain XDD1_RS14430 PF04607 Region found in RelA / SpoT proteins XDD1_RS14430 PF02824 TGS domain XDD1_RS14430 PF13291 ACT domain XDD1_RS14435 PF03819 MazG nucleotide pyrophosphohydrolase domain XDD1_RS14440 PF00117 Glutamine amidotransferase class-I XDD1_RS14440 PF06418 CTP synthase N-terminus XDD1_RS14445 PF03952 Enolase, N-terminal domain XDD1_RS14445 PF00113 Enolase, C-terminal TIM barrel domain XDD1_RS14460 PF00939 Sodium:sulfate symporter transmembrane region XDD1_RS14465 PF00171 Aldehyde dehydrogenase family XDD1_RS14470 PF00375 Sodium:dicarboxylate symporter family XDD1_RS14485 PF17283 SprT-like zinc ribbon domain XDD1_RS14485 PF10263 SprT-like family XDD1_RS14490 PF02772 S-adenosylmethionine synthetase, central domain XDD1_RS14490 PF00438 S-adenosylmethionine synthetase, N-terminal domain XDD1_RS14490 PF02773 S-adenosylmethionine synthetase, C-terminal domain XDD1_RS14495 PF17944 Arginine decarboxylase C-terminal helical extension XDD1_RS14495 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XDD1_RS14495 PF17810 Arginine decarboxylase helical bundle domain XDD1_RS14500 PF00491 Arginase family XDD1_RS14515 PF01648 4'-phosphopantetheinyl transferase superfamily XDD1_RS14515 PF17837 4'-phosphopantetheinyl transferase N-terminal domain XDD1_RS14520 PF16363 GDP-mannose 4,6 dehydratase XDD1_RS14525 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain XDD1_RS14525 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain XDD1_RS14530 PF00288 GHMP kinases N terminal domain XDD1_RS14530 PF08544 GHMP kinases C terminal XDD1_RS14530 PF10509 Galactokinase galactose-binding signature XDD1_RS14545 PF00557 Metallopeptidase family M24 XDD1_RS14550 PF02661 Fic/DOC family XDD1_RS14550 PF13784 Fic/DOC family N-terminal XDD1_RS14555 PF17841 BID domain of Bartonella effector protein (Bep) XDD1_RS14555 PF02661 Fic/DOC family XDD1_RS14560 PF05190 MutS family domain IV XDD1_RS14560 PF00488 MutS domain V XDD1_RS14560 PF05192 MutS domain III XDD1_RS14560 PF01624 MutS domain I XDD1_RS14560 PF05188 MutS domain II XDD1_RS14565 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) XDD1_RS14570 PF04542 Sigma-70 region 2 XDD1_RS14570 PF04539 Sigma-70 region 3 XDD1_RS14570 PF00140 Sigma-70 factor, region 1.2 XDD1_RS14570 PF04545 Sigma-70, region 4 XDD1_RS14575 PF01476 LysM domain XDD1_RS14575 PF01551 Peptidase family M23 XDD1_RS14585 PF01975 Survival protein SurE XDD1_RS14590 PF01142 tRNA pseudouridine synthase D (TruD) XDD1_RS14595 PF02542 YgbB family XDD1_RS14600 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XDD1_RS14605 PF04977 Septum formation initiator XDD1_RS14615 PF00009 Elongation factor Tu GTP binding domain XDD1_RS14620 PF01507 Phosphoadenosine phosphosulfate reductase family XDD1_RS14625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XDD1_RS14625 PF10414 Sirohaem synthase dimerisation region XDD1_RS14625 PF14824 Sirohaem biosynthesis protein central XDD1_RS14630 PF01507 Phosphoadenosine phosphosulfate reductase family XDD1_RS14635 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XDD1_RS14635 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XDD1_RS14640 PF00667 FAD binding domain XDD1_RS14640 PF00258 Flavodoxin XDD1_RS14640 PF00175 Oxidoreductase NAD-binding domain XDD1_RS14645 PF01242 6-pyruvoyl tetrahydropterin synthase XDD1_RS14650 PF04055 Radical SAM superfamily XDD1_RS14655 PF00324 Amino acid permease XDD1_RS14660 PF03372 Endonuclease/Exonuclease/phosphatase family XDD1_RS14695 PF12724 Flavodoxin domain XDD1_RS14700 PF02386 Cation transport protein XDD1_RS14705 PF09186 Domain of unknown function (DUF1949) XDD1_RS14705 PF01205 Uncharacterized protein family UPF0029 XDD1_RS14710 PF00557 Metallopeptidase family M24 XDD1_RS14715 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XDD1_RS14715 PF00378 Enoyl-CoA hydratase/isomerase XDD1_RS14715 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XDD1_RS14720 PF02803 Thiolase, C-terminal domain XDD1_RS14720 PF00108 Thiolase, N-terminal domain XDD1_RS14725 PF00970 Oxidoreductase FAD-binding domain XDD1_RS14725 PF00175 Oxidoreductase NAD-binding domain XDD1_RS14730 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase XDD1_RS14735 PF02357 Transcription termination factor nusG XDD1_RS14740 PF00490 Delta-aminolevulinic acid dehydratase XDD1_RS14745 PF00902 Sec-independent protein translocase protein (TatC) XDD1_RS14755 PF02416 mttA/Hcf106 family XDD1_RS14760 PF03109 ABC1 family XDD1_RS14765 PF02036 SCP-2 sterol transfer family XDD1_RS14770 PF01209 ubiE/COQ5 methyltransferase family XDD1_RS14775 PF02646 RmuC family XDD1_RS14780 PF09335 SNARE associated Golgi protein XDD1_RS14790 PF01048 Phosphorylase superfamily XDD1_RS14795 PF02447 GntP family permease XDD1_RS14800 PF02447 GntP family permease XDD1_RS14805 PF01370 NAD dependent epimerase/dehydratase family XDD1_RS14810 PF00455 DeoR C terminal sensor domain XDD1_RS14810 PF08220 DeoR-like helix-turn-helix domain XDD1_RS14815 PF01261 Xylose isomerase-like TIM barrel XDD1_RS14820 PF07005 Sugar-binding N-terminal domain XDD1_RS14820 PF17042 Nucleotide-binding C-terminal domain XDD1_RS14835 PF01717 Cobalamin-independent synthase, Catalytic domain XDD1_RS14835 PF08267 Cobalamin-independent synthase, N-terminal domain XDD1_RS14840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS14840 PF03466 LysR substrate binding domain XDD1_RS14845 PF00999 Sodium/hydrogen exchanger family XDD1_RS14850 PF00860 Permease family XDD1_RS14870 PF07350 Protein of unknown function (DUF1479) XDD1_RS14875 PF02685 Glucokinase XDD1_RS14890 PF00436 Single-strand binding protein family XDD1_RS14895 PF00005 ABC transporter XDD1_RS14895 PF17755 UvrA DNA-binding domain XDD1_RS14895 PF17760 UvrA interaction domain XDD1_RS14910 PF00155 Aminotransferase class I and II XDD1_RS14915 PF01168 Alanine racemase, N-terminal domain XDD1_RS14915 PF00842 Alanine racemase, C-terminal domain XDD1_RS14920 PF00772 DnaB-like helicase N terminal domain XDD1_RS14920 PF03796 DnaB-like helicase C terminal domain XDD1_RS14925 PF13693 Winged helix-turn-helix DNA-binding XDD1_RS14980 PF05638 Type VI secretion system effector, Hcp XDD1_RS15010 PF00107 Zinc-binding dehydrogenase XDD1_RS15010 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS15015 PF01207 Dihydrouridine synthase (Dus) XDD1_RS15025 PF01475 Ferric uptake regulator family XDD1_RS15030 PF01726 LexA DNA binding domain XDD1_RS15030 PF00717 Peptidase S24-like XDD1_RS15035 PF01219 Prokaryotic diacylglycerol kinase XDD1_RS15040 PF01553 Acyltransferase XDD1_RS15045 PF01040 UbiA prenyltransferase family XDD1_RS15050 PF04345 Chorismate lyase XDD1_RS15055 PF00342 Phosphoglucose isomerase XDD1_RS15060 PF01842 ACT domain XDD1_RS15060 PF00696 Amino acid kinase family XDD1_RS15070 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system XDD1_RS15075 PF01614 Bacterial transcriptional regulator XDD1_RS15075 PF09339 IclR helix-turn-helix domain XDD1_RS15080 PF01081 KDPG and KHG aldolase XDD1_RS15085 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) XDD1_RS15090 PF00463 Isocitrate lyase family XDD1_RS15095 PF01274 Malate synthase XDD1_RS15100 PF04204 Homoserine O-succinyltransferase XDD1_RS15135 PF00005 ABC transporter XDD1_RS15135 PF09383 NIL domain XDD1_RS15140 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS15145 PF03180 NLPA lipoprotein XDD1_RS15155 PF01980 tRNA-methyltransferase O XDD1_RS15155 PF18389 TrmO C-terminal domain XDD1_RS15160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XDD1_RS15160 PF03129 Anticodon binding domain XDD1_RS15160 PF04073 Aminoacyl-tRNA editing domain XDD1_RS15165 PF04170 NlpE N-terminal domain XDD1_RS15165 PF17185 NlpE C-terminal OB domain XDD1_RS15170 PF07073 Modulator of Rho-dependent transcription termination (ROF) XDD1_RS15180 PF09179 TilS substrate binding domain XDD1_RS15180 PF01171 PP-loop family XDD1_RS15180 PF11734 TilS substrate C-terminal domain XDD1_RS15190 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XDD1_RS15195 PF02811 PHP domain XDD1_RS15195 PF07733 Bacterial DNA polymerase III alpha NTPase domain XDD1_RS15195 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XDD1_RS15195 PF01336 OB-fold nucleic acid binding domain XDD1_RS15195 PF14579 Helix-hairpin-helix motif XDD1_RS15200 PF01351 Ribonuclease HII XDD1_RS15205 PF02684 Lipid-A-disaccharide synthetase XDD1_RS15210 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XDD1_RS15210 PF00132 Bacterial transferase hexapeptide (six repeats) XDD1_RS15215 PF07977 FabA-like domain XDD1_RS15220 PF00132 Bacterial transferase hexapeptide (six repeats) XDD1_RS15220 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XDD1_RS15225 PF03938 Outer membrane protein (OmpH-like) XDD1_RS15230 PF01103 Surface antigen XDD1_RS15230 PF07244 Surface antigen variable number repeat XDD1_RS15235 PF17820 PDZ domain XDD1_RS15235 PF02163 Peptidase family M50 XDD1_RS15245 PF01255 Putative undecaprenyl diphosphate synthase XDD1_RS15250 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XDD1_RS15250 PF13288 DXP reductoisomerase C-terminal domain XDD1_RS15250 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XDD1_RS15255 PF01765 Ribosome recycling factor XDD1_RS15260 PF00696 Amino acid kinase family XDD1_RS15265 PF00889 Elongation factor TS XDD1_RS15270 PF00318 Ribosomal protein S2 XDD1_RS15275 PF00557 Metallopeptidase family M24 XDD1_RS15280 PF08335 GlnD PII-uridylyltransferase XDD1_RS15280 PF01966 HD domain XDD1_RS15280 PF01842 ACT domain XDD1_RS15285 PF14602 Hexapeptide repeat of succinyl-transferase XDD1_RS15285 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XDD1_RS15285 PF00132 Bacterial transferase hexapeptide (six repeats) XDD1_RS15295 PF11944 Protein of unknown function (DUF3461) XDD1_RS15300 PF00258 Flavodoxin XDD1_RS15305 PF00849 RNA pseudouridylate synthase XDD1_RS15310 PF04287 tRNA pseudouridine synthase C XDD1_RS15315 PF07348 Syd protein (SUKH-2) XDD1_RS15335 PF14489 QueF-like protein XDD1_RS15335 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XDD1_RS15345 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XDD1_RS15345 PF01367 5'-3' exonuclease, C-terminal SAM fold XDD1_RS15350 PF02321 Outer membrane efflux protein XDD1_RS15355 PF00529 HlyD membrane-fusion protein of T1SS XDD1_RS15360 PF00664 ABC transporter transmembrane region XDD1_RS15360 PF00005 ABC transporter XDD1_RS15365 PF02974 Protease inhibitor Inh XDD1_RS15370 PF08548 Peptidase M10 serralysin C terminal XDD1_RS15370 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XDD1_RS15380 PF13358 DDE superfamily endonuclease XDD1_RS15380 PF13592 Winged helix-turn helix XDD1_RS15390 PF13649 Methyltransferase domain XDD1_RS15390 PF17827 PrmC N-terminal domain XDD1_RS15395 PF00155 Aminotransferase class I and II XDD1_RS15405 PF13358 DDE superfamily endonuclease XDD1_RS15405 PF13592 Winged helix-turn helix XDD1_RS15410 PF00117 Glutamine amidotransferase class-I XDD1_RS15410 PF00425 chorismate binding enzyme XDD1_RS15410 PF04715 Anthranilate synthase component I, N terminal region XDD1_RS15420 PF07690 Major Facilitator Superfamily XDD1_RS15435 PF01728 FtsJ-like methyltransferase XDD1_RS15435 PF18125 RlmM ferredoxin-like domain XDD1_RS15440 PF04241 Protein of unknown function (DUF423) XDD1_RS15445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS15445 PF03466 LysR substrate binding domain XDD1_RS15450 PF00266 Aminotransferase class-V XDD1_RS15470 PF05638 Type VI secretion system effector, Hcp XDD1_RS15475 PF02657 Fe-S metabolism associated domain XDD1_RS15480 PF00899 ThiF family XDD1_RS15485 PF03562 MltA specific insert domain XDD1_RS15485 PF06725 3D domain XDD1_RS15500 PF11741 AMIN domain XDD1_RS15500 PF01520 N-acetylmuramoyl-L-alanine amidase XDD1_RS15505 PF00583 Acetyltransferase (GNAT) family XDD1_RS15505 PF00696 Amino acid kinase family XDD1_RS15510 PF13538 UvrD-like helicase C-terminal domain XDD1_RS15515 PF12705 PD-(D/E)XK nuclease superfamily XDD1_RS15515 PF13361 UvrD-like helicase C-terminal domain XDD1_RS15515 PF00580 UvrD/REP helicase N-terminal domain XDD1_RS15520 PF05193 Peptidase M16 inactive domain XDD1_RS15520 PF16187 Middle or third domain of peptidase_M16 XDD1_RS15520 PF00675 Insulinase (Peptidase family M16) XDD1_RS15525 PF17946 RecC C-terminal domain XDD1_RS15545 PF07963 Prokaryotic N-terminal methylation motif XDD1_RS15555 PF00303 Thymidylate synthase XDD1_RS15560 PF01790 Prolipoprotein diacylglyceryl transferase XDD1_RS15565 PF05524 PEP-utilising enzyme, N-terminal XDD1_RS15565 PF01590 GAF domain XDD1_RS15565 PF02896 PEP-utilising enzyme, TIM barrel domain XDD1_RS15565 PF00391 PEP-utilising enzyme, mobile domain XDD1_RS15570 PF00293 NUDIX domain XDD1_RS15580 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS15585 PF00005 ABC transporter XDD1_RS15605 PF03104 DNA polymerase family B, exonuclease domain XDD1_RS15605 PF00136 DNA polymerase family B XDD1_RS15610 PF00176 SNF2 family N-terminal domain XDD1_RS15610 PF18339 RapA N-terminal Tudor like domain 1 XDD1_RS15610 PF00271 Helicase conserved C-terminal domain XDD1_RS15610 PF18337 RapA N-terminal Tudor like domain XDD1_RS15610 PF12137 RNA polymerase recycling family C-terminal XDD1_RS15615 PF00849 RNA pseudouridylate synthase XDD1_RS15620 PF00226 DnaJ domain XDD1_RS15620 PF05099 Tellurite resistance protein TerB XDD1_RS15625 PF03968 OstA-like protein XDD1_RS15625 PF04453 LPS transport system D XDD1_RS15630 PF09312 SurA N-terminal domain XDD1_RS15635 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XDD1_RS15640 PF00398 Ribosomal RNA adenine dimethylase XDD1_RS15645 PF04379 ApaG domain XDD1_RS15650 PF00149 Calcineurin-like phosphoesterase XDD1_RS15655 PF00186 Dihydrofolate reductase XDD1_RS15660 PF07732 Multicopper oxidase XDD1_RS15660 PF07731 Multicopper oxidase XDD1_RS15665 PF01553 Acyltransferase XDD1_RS15670 PF00521 DNA gyrase/topoisomerase IV, subunit A XDD1_RS15670 PF03989 DNA gyrase C-terminal domain, beta-propeller XDD1_RS15675 PF00204 DNA gyrase B XDD1_RS15675 PF01751 Toprim domain XDD1_RS15675 PF00986 DNA gyrase B subunit, carboxyl terminus XDD1_RS15675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS15680 PF05728 Uncharacterised protein family (UPF0227) XDD1_RS15685 PF00149 Calcineurin-like phosphoesterase XDD1_RS15690 PF00293 NUDIX domain XDD1_RS15695 PF02321 Outer membrane efflux protein XDD1_RS15700 PF06693 Protein of unknown function (DUF1190) XDD1_RS15705 PF03738 Glutathionylspermidine synthase preATP-grasp XDD1_RS15710 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase XDD1_RS15715 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XDD1_RS15720 PF04380 Membrane fusogenic activity XDD1_RS15725 PF00294 pfkB family carbohydrate kinase XDD1_RS15725 PF01467 Cytidylyltransferase-like XDD1_RS15730 PF03710 Glutamate-ammonia ligase adenylyltransferase XDD1_RS15730 PF08335 GlnD PII-uridylyltransferase XDD1_RS15735 PF01928 CYTH domain XDD1_RS15740 PF08239 Bacterial SH3 domain XDD1_RS15745 PF01966 HD domain XDD1_RS15745 PF01743 Poly A polymerase head domain XDD1_RS15745 PF12627 Probable RNA and SrmB- binding site of polymerase A XDD1_RS15750 PF02152 Dihydroneopterin aldolase XDD1_RS15755 PF02660 Glycerol-3-phosphate acyltransferase XDD1_RS15760 PF00814 Glycoprotease family XDD1_RS15770 PF01165 Ribosomal protein S21 XDD1_RS15775 PF10410 DnaB-helicase binding domain of primase XDD1_RS15775 PF08275 DNA primase catalytic core, N-terminal domain XDD1_RS15775 PF08278 DNA primase DnaG DnaB-binding XDD1_RS15775 PF01807 CHC2 zinc finger XDD1_RS15780 PF04539 Sigma-70 region 3 XDD1_RS15780 PF00140 Sigma-70 factor, region 1.2 XDD1_RS15780 PF04545 Sigma-70, region 4 XDD1_RS15780 PF04542 Sigma-70 region 2 XDD1_RS15780 PF03979 Sigma-70 factor, region 1.1 XDD1_RS15780 PF04546 Sigma-70, non-essential region XDD1_RS15795 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system XDD1_RS15800 PF07927 HicA toxin of bacterial toxin-antitoxin, XDD1_RS15820 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XDD1_RS15935 PF05840 Bacteriophage replication gene A protein (GPA) XDD1_RS15955 PF17282 Family of unknown function (DUF5347) XDD1_RS15960 PF06892 Phage regulatory protein CII (CP76) XDD1_RS15975 PF02899 Phage integrase, N-terminal SAM-like domain XDD1_RS15975 PF00589 Phage integrase family XDD1_RS16000 PF00550 Phosphopantetheine attachment site XDD1_RS16005 PF00550 Phosphopantetheine attachment site XDD1_RS16015 PF00501 AMP-binding enzyme XDD1_RS16015 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS16020 PF07977 FabA-like domain XDD1_RS16050 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS16050 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS16055 PF07977 FabA-like domain XDD1_RS16065 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS16065 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS16070 PF07690 Major Facilitator Superfamily XDD1_RS16075 PF13673 Acetyltransferase (GNAT) domain XDD1_RS16080 PF04393 Protein of unknown function (DUF535) XDD1_RS16090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XDD1_RS16090 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS16095 PF00375 Sodium:dicarboxylate symporter family XDD1_RS16100 PF09335 SNARE associated Golgi protein XDD1_RS16105 PF05957 Bacterial protein of unknown function (DUF883) XDD1_RS16110 PF07332 Putative Actinobacterial Holin-X, holin superfamily III XDD1_RS16120 PF07681 DoxX XDD1_RS16125 PF03466 LysR substrate binding domain XDD1_RS16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS16130 PF17954 Quercetinase C-terminal cupin domain XDD1_RS16130 PF02678 Pirin XDD1_RS16135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XDD1_RS16140 PF04348 LppC putative lipoprotein XDD1_RS16145 PF02021 Uncharacterised protein family UPF0102 XDD1_RS16150 PF13580 SIS domain XDD1_RS16155 PF04972 BON domain XDD1_RS16180 PF00912 Transglycosylase XDD1_RS16190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS16190 PF00072 Response regulator receiver domain XDD1_RS16190 PF01627 Hpt domain XDD1_RS16190 PF00989 PAS fold XDD1_RS16190 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS16190 PF18415 Histidine kinase receptor ArcB trans-membrane domain XDD1_RS16195 PF01493 GXGXG motif XDD1_RS16195 PF01645 Conserved region in glutamate synthase XDD1_RS16195 PF04898 Glutamate synthase central domain XDD1_RS16195 PF00310 Glutamine amidotransferases class-II XDD1_RS16200 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS16200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XDD1_RS16210 PF04386 Stringent starvation protein B XDD1_RS16215 PF02798 Glutathione S-transferase, N-terminal domain XDD1_RS16215 PF00043 Glutathione S-transferase, C-terminal domain XDD1_RS16220 PF00380 Ribosomal protein S9/S16 XDD1_RS16225 PF00572 Ribosomal protein L13 XDD1_RS16230 PF03969 AFG1-like ATPase XDD1_RS16235 PF06295 Protein of unknown function (DUF1043) XDD1_RS16240 PF00595 PDZ domain XDD1_RS16240 PF13180 PDZ domain XDD1_RS16245 PF13180 PDZ domain XDD1_RS16250 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XDD1_RS16255 PF01722 BolA-like protein XDD1_RS16265 PF05494 MlaC protein XDD1_RS16270 PF02470 MlaD protein XDD1_RS16275 PF02405 Permease MlaE XDD1_RS16280 PF00005 ABC transporter XDD1_RS16285 PF01699 Sodium/calcium exchanger protein XDD1_RS16290 PF01380 SIS domain XDD1_RS16290 PF00571 CBS domain XDD1_RS16300 PF06835 Lipopolysaccharide-assembly, LptC-related XDD1_RS16305 PF03968 OstA-like protein XDD1_RS16310 PF12399 Branched-chain amino acid ATP-binding cassette transporter XDD1_RS16310 PF00005 ABC transporter XDD1_RS16315 PF04963 Sigma-54 factor, core binding domain XDD1_RS16315 PF04552 Sigma-54, DNA binding domain XDD1_RS16315 PF00309 Sigma-54 factor, Activator interacting domain (AID) XDD1_RS16320 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XDD1_RS16325 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 XDD1_RS16330 PF03668 P-loop ATPase protein family XDD1_RS16335 PF00381 PTS HPr component phosphorylation site XDD1_RS16340 PF00842 Alanine racemase, C-terminal domain XDD1_RS16340 PF01168 Alanine racemase, N-terminal domain XDD1_RS16345 PF14760 Rnk N-terminus XDD1_RS16345 PF01272 Transcription elongation factor, GreA/GreB, C-term XDD1_RS16360 PF01523 Putative modulator of DNA gyrase XDD1_RS16365 PF04751 Protein of unknown function (DUF615) XDD1_RS16370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XDD1_RS16370 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XDD1_RS16370 PF01842 ACT domain XDD1_RS16375 PF07338 Protein of unknown function (DUF1471) XDD1_RS16380 PF09278 MerR, DNA binding XDD1_RS16380 PF00376 MerR family regulatory protein XDD1_RS16395 PF00873 AcrB/AcrD/AcrF family XDD1_RS16400 PF01523 Putative modulator of DNA gyrase XDD1_RS16405 PF00795 Carbon-nitrogen hydrolase XDD1_RS16410 PF13116 Protein of unknown function XDD1_RS16410 PF13502 AsmA-like C-terminal region XDD1_RS16415 PF10150 Ribonuclease E/G family XDD1_RS16415 PF00575 S1 RNA binding domain XDD1_RS16420 PF02545 Maf-like protein XDD1_RS16425 PF04093 rod shape-determining protein MreD XDD1_RS16430 PF04085 rod shape-determining protein MreC XDD1_RS16440 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS16440 PF00107 Zinc-binding dehydrogenase XDD1_RS16445 PF01220 Dehydroquinase class II XDD1_RS16450 PF00364 Biotin-requiring enzyme XDD1_RS16455 PF02785 Biotin carboxylase C-terminal domain XDD1_RS16455 PF00289 Biotin carboxylase, N-terminal domain XDD1_RS16455 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XDD1_RS16460 PF06196 Protein of unknown function (DUF997) XDD1_RS16465 PF00474 Sodium:solute symporter family XDD1_RS16475 PF01207 Dihydrouridine synthase (Dus) XDD1_RS16480 PF02954 Bacterial regulatory protein, Fis family XDD1_RS16500 PF05638 Type VI secretion system effector, Hcp XDD1_RS16510 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS16510 PF00501 AMP-binding enzyme XDD1_RS16510 PF00550 Phosphopantetheine attachment site XDD1_RS16510 PF00668 Condensation domain XDD1_RS16515 PF01381 Helix-turn-helix XDD1_RS16520 PF02595 Glycerate kinase family XDD1_RS16525 PF04545 Sigma-70, region 4 XDD1_RS16525 PF04542 Sigma-70 region 2 XDD1_RS16525 PF00140 Sigma-70 factor, region 1.2 XDD1_RS16530 PF18075 FtsX extracellular domain XDD1_RS16530 PF02687 FtsX-like permease family XDD1_RS16535 PF00005 ABC transporter XDD1_RS16540 PF02881 SRP54-type protein, helical bundle domain XDD1_RS16540 PF00448 SRP54-type protein, GTPase domain XDD1_RS16540 PF02881 SRP54-type protein, helical bundle domain XDD1_RS16540 PF00448 SRP54-type protein, GTPase domain XDD1_RS16550 PF06611 Protein of unknown function (DUF1145) XDD1_RS16555 PF00403 Heavy-metal-associated domain XDD1_RS16560 PF01206 Sulfurtransferase TusA XDD1_RS16565 PF02592 Putative vitamin uptake transporter XDD1_RS16570 PF00465 Iron-containing alcohol dehydrogenase XDD1_RS16575 PF00550 Phosphopantetheine attachment site XDD1_RS16575 PF00668 Condensation domain XDD1_RS16575 PF00501 AMP-binding enzyme XDD1_RS16575 PF00109 Beta-ketoacyl synthase, N-terminal domain XDD1_RS16575 PF14765 Polyketide synthase dehydratase XDD1_RS16575 PF02801 Beta-ketoacyl synthase, C-terminal domain XDD1_RS16575 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS16575 PF08659 KR domain XDD1_RS16575 PF16197 Ketoacyl-synthetase C-terminal extension XDD1_RS16580 PF07690 Major Facilitator Superfamily XDD1_RS16585 PF03009 Glycerophosphoryl diester phosphodiesterase family XDD1_RS16590 PF00152 tRNA synthetases class II (D, K and N) XDD1_RS16595 PF00890 FAD binding domain XDD1_RS16595 PF02910 Fumarate reductase flavoprotein C-term XDD1_RS16600 PF13085 2Fe-2S iron-sulfur cluster binding domain XDD1_RS16600 PF13183 4Fe-4S dicluster domain XDD1_RS16605 PF02300 Fumarate reductase subunit C XDD1_RS16610 PF02313 Fumarate reductase subunit D XDD1_RS16615 PF07715 TonB-dependent Receptor Plug Domain XDD1_RS16615 PF00593 TonB dependent receptor XDD1_RS16625 PF00364 Biotin-requiring enzyme XDD1_RS16625 PF00289 Biotin carboxylase, N-terminal domain XDD1_RS16625 PF02785 Biotin carboxylase C-terminal domain XDD1_RS16625 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XDD1_RS16635 PF03746 LamB/YcsF family XDD1_RS16640 PF01566 Natural resistance-associated macrophage protein XDD1_RS16670 PF02142 MGS-like domain XDD1_RS16670 PF01808 AICARFT/IMPCHase bienzyme XDD1_RS16675 PF02843 Phosphoribosylglycinamide synthetase, C domain XDD1_RS16675 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XDD1_RS16675 PF02844 Phosphoribosylglycinamide synthetase, N domain XDD1_RS16680 PF07356 Protein of unknown function (DUF1481) XDD1_RS16685 PF00216 Bacterial DNA-binding protein XDD1_RS16690 PF04222 Protein of unknown function (DUF416) XDD1_RS16695 PF04493 Endonuclease V XDD1_RS16700 PF01208 Uroporphyrinogen decarboxylase (URO-D) XDD1_RS16705 PF00293 NUDIX domain XDD1_RS16705 PF09297 NADH pyrophosphatase zinc ribbon domain XDD1_RS16710 PF13667 ThiC-associated domain XDD1_RS16710 PF01964 Radical SAM ThiC family XDD1_RS16715 PF02581 Thiamine monophosphate synthase XDD1_RS16720 PF00899 ThiF family XDD1_RS16730 PF05690 Thiazole biosynthesis protein ThiG XDD1_RS16735 PF04055 Radical SAM superfamily XDD1_RS16735 PF06968 Biotin and Thiamin Synthesis associated domain XDD1_RS16740 PF00293 NUDIX domain XDD1_RS16745 PF13419 Haloacid dehalogenase-like hydrolase XDD1_RS16750 PF13592 Winged helix-turn helix XDD1_RS16750 PF13358 DDE superfamily endonuclease XDD1_RS16760 PF07690 Major Facilitator Superfamily XDD1_RS16765 PF13419 Haloacid dehalogenase-like hydrolase XDD1_RS16770 PF08240 Alcohol dehydrogenase GroES-like domain XDD1_RS16770 PF00107 Zinc-binding dehydrogenase XDD1_RS16775 PF00202 Aminotransferase class-III XDD1_RS16780 PF17874 MalT-like TPR region XDD1_RS16780 PF00196 Bacterial regulatory proteins, luxR family XDD1_RS16785 PF00343 Carbohydrate phosphorylase XDD1_RS16790 PF02446 4-alpha-glucanotransferase XDD1_RS16795 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS16800 PF14785 Maltose transport system permease protein MalF P2 domain XDD1_RS16800 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS16805 PF01547 Bacterial extracellular solute-binding protein XDD1_RS16810 PF00005 ABC transporter XDD1_RS16810 PF17912 MalK OB fold domain XDD1_RS16815 PF02264 LamB porin XDD1_RS16820 PF07148 Maltose operon periplasmic protein precursor (MalM) XDD1_RS16830 PF01522 Polysaccharide deacetylase XDD1_RS16835 PF05000 RNA polymerase Rpb1, domain 4 XDD1_RS16835 PF04983 RNA polymerase Rpb1, domain 3 XDD1_RS16835 PF04998 RNA polymerase Rpb1, domain 5 XDD1_RS16835 PF04997 RNA polymerase Rpb1, domain 1 XDD1_RS16835 PF00623 RNA polymerase Rpb1, domain 2 XDD1_RS16840 PF00562 RNA polymerase Rpb2, domain 6 XDD1_RS16840 PF10385 RNA polymerase beta subunit external 1 domain XDD1_RS16840 PF04561 RNA polymerase Rpb2, domain 2 XDD1_RS16840 PF04563 RNA polymerase beta subunit XDD1_RS16840 PF04560 RNA polymerase Rpb2, domain 7 XDD1_RS16840 PF04565 RNA polymerase Rpb2, domain 3 XDD1_RS16845 PF16320 Ribosomal protein L7/L12 dimerisation domain XDD1_RS16845 PF00542 Ribosomal protein L7/L12 C-terminal domain XDD1_RS16850 PF00466 Ribosomal protein L10 XDD1_RS16855 PF00687 Ribosomal protein L1p/L10e family XDD1_RS16860 PF03946 Ribosomal protein L11, N-terminal domain XDD1_RS16860 PF00298 Ribosomal protein L11, RNA binding domain XDD1_RS16865 PF02357 Transcription termination factor nusG XDD1_RS16865 PF00467 KOW motif XDD1_RS16870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XDD1_RS16875 PF00009 Elongation factor Tu GTP binding domain XDD1_RS16875 PF03144 Elongation factor Tu domain 2 XDD1_RS16875 PF03143 Elongation factor Tu C-terminal domain XDD1_RS16880 PF00679 Elongation factor G C-terminus XDD1_RS16880 PF14492 Elongation Factor G, domain II XDD1_RS16880 PF03144 Elongation factor Tu domain 2 XDD1_RS16880 PF03764 Elongation factor G, domain IV XDD1_RS16880 PF00009 Elongation factor Tu GTP binding domain XDD1_RS16885 PF00177 Ribosomal protein S7p/S5e XDD1_RS16890 PF00164 Ribosomal protein S12/S23 XDD1_RS16895 PF04077 DsrH like protein XDD1_RS16900 PF02635 DsrE/DsrF-like family XDD1_RS16905 PF02635 DsrE/DsrF-like family XDD1_RS16910 PF13309 HTH domain XDD1_RS16910 PF08348 YheO-like PAS domain XDD1_RS16915 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XDD1_RS16915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XDD1_RS16920 PF04102 SlyX XDD1_RS16925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XDD1_RS16930 PF09526 Probable metal-binding protein (DUF2387) XDD1_RS16935 PF00005 ABC transporter XDD1_RS16935 PF12848 ABC transporter XDD1_RS16940 PF03466 LysR substrate binding domain XDD1_RS16940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS16945 PF13580 SIS domain XDD1_RS16950 PF02378 Phosphotransferase system, EIIC XDD1_RS16950 PF00367 phosphotransferase system, EIIB XDD1_RS16955 PF01810 LysE type translocator XDD1_RS16960 PF06794 Uncharacterised protein family (UPF0270) XDD1_RS16965 PF00485 Phosphoribulokinase / Uridine kinase family XDD1_RS16970 PF13545 Crp-like helix-turn-helix domain XDD1_RS16970 PF00027 Cyclic nucleotide-binding domain XDD1_RS16975 PF00202 Aminotransferase class-III XDD1_RS16980 PF00117 Glutamine amidotransferase class-I XDD1_RS16985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XDD1_RS16990 PF01926 50S ribosome-binding GTPase XDD1_RS16995 PF00476 DNA polymerase family A XDD1_RS16995 PF01612 3'-5' exonuclease XDD1_RS16995 PF01367 5'-3' exonuclease, C-terminal SAM fold XDD1_RS16995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XDD1_RS17000 PF01323 DSBA-like thioredoxin domain XDD1_RS17005 PF01636 Phosphotransferase enzyme family XDD1_RS17010 PF06288 Protein of unknown function (DUF1040) XDD1_RS17025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XDD1_RS17030 PF07992 Pyridine nucleotide-disulphide oxidoreductase XDD1_RS17030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XDD1_RS17040 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XDD1_RS17040 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XDD1_RS17045 PF00325 Bacterial regulatory proteins, crp family XDD1_RS17045 PF04198 Putative sugar-binding domain XDD1_RS17050 PF00005 ABC transporter XDD1_RS17055 PF02653 Branched-chain amino acid transport system / permease component XDD1_RS17060 PF02653 Branched-chain amino acid transport system / permease component XDD1_RS17065 PF13407 Periplasmic binding protein domain XDD1_RS17070 PF01791 DeoC/LacD family aldolase XDD1_RS17075 PF03992 Antibiotic biosynthesis monooxygenase XDD1_RS17080 PF00282 Pyridoxal-dependent decarboxylase conserved domain XDD1_RS17085 PF03205 Molybdopterin guanine dinucleotide synthesis protein B XDD1_RS17090 PF12804 MobA-like NTP transferase domain XDD1_RS17130 PF05593 RHS Repeat XDD1_RS17130 PF03527 RHS protein XDD1_RS17170 PF03527 RHS protein XDD1_RS17170 PF05593 RHS Repeat XDD1_RS17185 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS17200 PF08845 Toxin SymE, type I toxin-antitoxin system XDD1_RS17225 PF08845 Toxin SymE, type I toxin-antitoxin system XDD1_RS17280 PF03527 RHS protein XDD1_RS17280 PF05593 RHS Repeat XDD1_RS17295 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS17315 PF08845 Toxin SymE, type I toxin-antitoxin system XDD1_RS17335 PF05488 PAAR motif XDD1_RS17335 PF05593 RHS Repeat XDD1_RS17345 PF04717 Type VI secretion system, phage-baseplate injector XDD1_RS17355 PF06744 Type VI secretion protein IcmF C-terminal XDD1_RS17355 PF14331 ImcF-related N-terminal domain XDD1_RS17355 PF06761 Intracellular multiplication and human macrophage-killing XDD1_RS17375 PF07724 AAA domain (Cdc48 subfamily) XDD1_RS17375 PF17871 AAA lid domain XDD1_RS17375 PF10431 C-terminal, D2-small domain, of ClpB protein XDD1_RS17375 PF00004 ATPase family associated with various cellular activities (AAA) XDD1_RS17385 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE XDD1_RS17405 PF05947 Type VI secretion system, TssF XDD1_RS17415 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath XDD1_RS17425 PF05638 Type VI secretion system effector, Hcp XDD1_RS17430 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XDD1_RS17430 PF08479 POTRA domain, ShlB-type XDD1_RS17430 PF17287 POTRA domain XDD1_RS17435 PF05860 haemagglutination activity domain XDD1_RS17435 PF13332 Hemagglutinin repeat XDD1_RS17440 PF03631 Virulence factor BrkB XDD1_RS17445 PF01361 Tautomerase enzyme XDD1_RS17460 PF04185 Phosphoesterase family XDD1_RS17460 PF05506 Domain of unknown function (DUF756) XDD1_RS17465 PF05193 Peptidase M16 inactive domain XDD1_RS17465 PF00675 Insulinase (Peptidase family M16) XDD1_RS17470 PF00672 HAMP domain XDD1_RS17470 PF00990 Diguanylate cyclase, GGDEF domain XDD1_RS17470 PF17154 Gammaproteobacterial periplasmic sensor domain XDD1_RS17470 PF00563 EAL domain XDD1_RS17475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XDD1_RS17475 PF00005 ABC transporter XDD1_RS17480 PF00005 ABC transporter XDD1_RS17480 PF08352 Oligopeptide/dipeptide transporter, C-terminal region XDD1_RS17485 PF12911 N-terminal TM domain of oligopeptide transport permease C XDD1_RS17485 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS17490 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS17495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle XDD1_RS17530 PF05746 DALR anticodon binding domain XDD1_RS17530 PF02092 Glycyl-tRNA synthetase beta subunit XDD1_RS17535 PF02091 Glycyl-tRNA synthetase alpha subunit XDD1_RS17540 PF03352 Methyladenine glycosylase XDD1_RS17545 PF13592 Winged helix-turn helix XDD1_RS17545 PF13358 DDE superfamily endonuclease XDD1_RS17550 PF13358 DDE superfamily endonuclease XDD1_RS17550 PF13592 Winged helix-turn helix XDD1_RS17555 PF00155 Aminotransferase class I and II XDD1_RS17560 PF07119 Protein of unknown function (DUF1375) XDD1_RS17565 PF12566 Protein of unknown function (DUF3748) XDD1_RS17565 PF07676 WD40-like Beta Propeller Repeat XDD1_RS17570 PF03458 UPF0126 domain XDD1_RS17575 PF03120 NAD-dependent DNA ligase OB-fold domain XDD1_RS17575 PF01653 NAD-dependent DNA ligase adenylation domain XDD1_RS17580 PF00625 Guanylate kinase XDD1_RS17585 PF01192 RNA polymerase Rpb6 XDD1_RS17590 PF02824 TGS domain XDD1_RS17590 PF13291 ACT domain XDD1_RS17590 PF04607 Region found in RelA / SpoT proteins XDD1_RS17595 PF17191 RecG wedge domain XDD1_RS17595 PF00271 Helicase conserved C-terminal domain XDD1_RS17595 PF00270 DEAD/DEAH box helicase XDD1_RS17600 PF07690 Major Facilitator Superfamily XDD1_RS17605 PF03616 Sodium/glutamate symporter XDD1_RS17610 PF00860 Permease family XDD1_RS17620 PF09500 Putative thioesterase (yiiD_Cterm) XDD1_RS17620 PF00583 Acetyltransferase (GNAT) family XDD1_RS17625 PF02580 D-Tyr-tRNA(Tyr) deacylase XDD1_RS17640 PF13419 Haloacid dehalogenase-like hydrolase XDD1_RS17650 PF00679 Elongation factor G C-terminus XDD1_RS17650 PF00009 Elongation factor Tu GTP binding domain XDD1_RS17650 PF03144 Elongation factor Tu domain 2 XDD1_RS17705 PF03951 Glutamine synthetase, beta-Grasp domain XDD1_RS17705 PF00120 Glutamine synthetase, catalytic domain XDD1_RS17710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS17710 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS17715 PF00158 Sigma-54 interaction domain XDD1_RS17715 PF00072 Response regulator receiver domain XDD1_RS17715 PF02954 Bacterial regulatory protein, Fis family XDD1_RS17720 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XDD1_RS17730 PF06969 HemN C-terminal domain XDD1_RS17730 PF04055 Radical SAM superfamily XDD1_RS17735 PF04220 Der GTPase activator (YihI) XDD1_RS17745 PF00860 Permease family XDD1_RS17755 PF07690 Major Facilitator Superfamily XDD1_RS17770 PF05638 Type VI secretion system effector, Hcp XDD1_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS17780 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS17785 PF00497 Bacterial extracellular solute-binding proteins, family 3 XDD1_RS17790 PF01895 PhoU domain XDD1_RS17795 PF00005 ABC transporter XDD1_RS17800 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS17805 PF00528 Binding-protein-dependent transport system inner membrane component XDD1_RS17810 PF12849 PBP superfamily domain XDD1_RS17845 PF00672 HAMP domain XDD1_RS17845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XDD1_RS17845 PF00512 His Kinase A (phospho-acceptor) domain XDD1_RS17850 PF00486 Transcriptional regulatory protein, C terminal XDD1_RS17850 PF00072 Response regulator receiver domain XDD1_RS17855 PF03449 Transcription elongation factor, N-terminal XDD1_RS17855 PF01272 Transcription elongation factor, GreA/GreB, C-term XDD1_RS17860 PF09371 Tex-like protein N-terminal domain XDD1_RS17860 PF00575 S1 RNA binding domain XDD1_RS17860 PF17674 HHH domain XDD1_RS17860 PF16921 Tex protein YqgF-like domain XDD1_RS17865 PF04023 FeoA domain XDD1_RS17870 PF07664 Ferrous iron transport protein B C terminus XDD1_RS17870 PF17910 FeoB cytosolic helical domain XDD1_RS17870 PF02421 Ferrous iron transport protein B XDD1_RS17870 PF07670 Nucleoside recognition XDD1_RS17875 PF09012 FeoC like transcriptional regulator XDD1_RS17880 PF03466 LysR substrate binding domain XDD1_RS17880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XDD1_RS17910 PF00975 Thioesterase domain XDD1_RS17910 PF00668 Condensation domain XDD1_RS17910 PF00501 AMP-binding enzyme XDD1_RS17910 PF00550 Phosphopantetheine attachment site XDD1_RS17910 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS17925 PF00550 Phosphopantetheine attachment site XDD1_RS17925 PF18563 TubC N-terminal docking domain XDD1_RS17925 PF00668 Condensation domain XDD1_RS17925 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS17925 PF00501 AMP-binding enzyme XDD1_RS17940 PF12897 Alanine-glyoxylate amino-transferase XDD1_RS17960 PF00561 alpha/beta hydrolase fold XDD1_RS17965 PF00156 Phosphoribosyl transferase domain XDD1_RS17970 PF01106 NifU-like domain XDD1_RS17970 PF01521 Iron-sulphur cluster biosynthesis XDD1_RS17975 PF00581 Rhodanese-like domain XDD1_RS17980 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease XDD1_RS17980 PF01694 Rhomboid family XDD1_RS17985 PF08220 DeoR-like helix-turn-helix domain XDD1_RS17985 PF00455 DeoR C terminal sensor domain XDD1_RS17990 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XDD1_RS17990 PF01266 FAD dependent oxidoreductase XDD1_RS18005 PF00962 Adenosine/AMP deaminase XDD1_RS18015 PF13358 DDE superfamily endonuclease XDD1_RS18025 PF14503 YhfZ C-terminal domain XDD1_RS18025 PF14502 Helix-turn-helix domain XDD1_RS18035 PF01168 Alanine racemase, N-terminal domain XDD1_RS18040 PF02126 Phosphotriesterase family XDD1_RS18045 PF10941 Protein of unknown function DUF2620 XDD1_RS18050 PF10797 Protein of unknown function XDD1_RS18055 PF00155 Aminotransferase class I and II XDD1_RS18080 PF05638 Type VI secretion system effector, Hcp XDD1_RS18090 PF01575 MaoC like domain XDD1_RS18090 PF00171 Aldehyde dehydrogenase family XDD1_RS18095 PF05138 Phenylacetic acid catabolic protein XDD1_RS18100 PF06243 Phenylacetic acid degradation B XDD1_RS18105 PF05138 Phenylacetic acid catabolic protein XDD1_RS18110 PF01883 Iron-sulfur cluster assembly protein XDD1_RS18115 PF00175 Oxidoreductase NAD-binding domain XDD1_RS18115 PF00111 2Fe-2S iron-sulfur cluster binding domain XDD1_RS18115 PF00970 Oxidoreductase FAD-binding domain XDD1_RS18120 PF00378 Enoyl-CoA hydratase/isomerase XDD1_RS18125 PF00378 Enoyl-CoA hydratase/isomerase XDD1_RS18130 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain XDD1_RS18130 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain XDD1_RS18130 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain XDD1_RS18135 PF03061 Thioesterase superfamily XDD1_RS18140 PF00108 Thiolase, N-terminal domain XDD1_RS18140 PF02803 Thiolase, C-terminal domain XDD1_RS18145 PF14535 AMP-binding enzyme C-terminal domain XDD1_RS18145 PF00501 AMP-binding enzyme XDD1_RS18150 PF07690 Major Facilitator Superfamily XDD1_RS18185 PF07690 Major Facilitator Superfamily XDD1_RS18195 PF00294 pfkB family carbohydrate kinase XDD1_RS18205 PF00392 Bacterial regulatory proteins, gntR family XDD1_RS18205 PF07702 UTRA domain XDD1_RS18210 PF00884 Sulfatase XDD1_RS18215 PF01320 Colicin immunity protein / pyocin immunity protein XDD1_RS18220 PF03513 Cloacin immunity protein XDD1_RS18225 PF00009 Elongation factor Tu GTP binding domain XDD1_RS18225 PF09106 Elongation factor SelB, winged helix XDD1_RS18225 PF09107 Elongation factor SelB, winged helix XDD1_RS18225 PF03144 Elongation factor Tu domain 2 XDD1_RS18235 PF05638 Type VI secretion system effector, Hcp XDD1_RS18250 PF12390 Selenocysteine synthase N terminal XDD1_RS18250 PF03841 L-seryl-tRNA selenium transferase XDD1_RS18255 PF04216 Protein involved in formate dehydrogenase formation XDD1_RS18265 PF01292 Prokaryotic cytochrome b561 XDD1_RS18270 PF09163 Formate dehydrogenase N, transmembrane XDD1_RS18270 PF13247 4Fe-4S dicluster domain XDD1_RS18275 PF01568 Molydopterin dinucleotide binding domain XDD1_RS18275 PF00384 Molybdopterin oxidoreductase XDD1_RS18275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XDD1_RS18280 PF04879 Molybdopterin oxidoreductase Fe4S4 domain XDD1_RS18280 PF00384 Molybdopterin oxidoreductase XDD1_RS18280 PF01568 Molydopterin dinucleotide binding domain XDD1_RS18285 PF02634 FdhD/NarQ family XDD1_RS18320 PF03544 Gram-negative bacterial TonB protein C-terminal XDD1_RS18325 PF10396 GTP-binding protein TrmE N-terminus XDD1_RS18325 PF01926 50S ribosome-binding GTPase XDD1_RS18325 PF12631 MnmE helical domain XDD1_RS18330 PF14849 YidC periplasmic domain XDD1_RS18330 PF02096 60Kd inner membrane protein XDD1_RS18335 PF00825 Ribonuclease P XDD1_RS18365 PF01476 LysM domain XDD1_RS18365 PF11924 Inverse autotransporter, beta-domain XDD1_RS18365 PF02369 Bacterial Ig-like domain (group 1) XDD1_RS18365 PF07979 Intimin C-type lectin domain XDD1_RS18375 PF00206 Lyase XDD1_RS18375 PF02655 ATP-grasp domain XDD1_RS18395 PF02675 S-adenosylmethionine decarboxylase XDD1_RS18400 PF08361 MAATS-type transcriptional repressor, C-terminal region XDD1_RS18400 PF00440 Bacterial regulatory proteins, tetR family XDD1_RS18420 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS18420 PF00668 Condensation domain XDD1_RS18420 PF00550 Phosphopantetheine attachment site XDD1_RS18420 PF00501 AMP-binding enzyme XDD1_RS18425 PF00975 Thioesterase domain XDD1_RS18425 PF00668 Condensation domain XDD1_RS18425 PF13193 AMP-binding enzyme C-terminal domain XDD1_RS18425 PF00501 AMP-binding enzyme XDD1_RS18425 PF00550 Phosphopantetheine attachment site XDD1_RS18445 PF00005 ABC transporter XDD1_RS18450 PF00005 ABC transporter XDD1_RS18450 PF08402 TOBE domain XDD1_RS18485 PF02413 Caudovirales tail fibre assembly protein, lambda gpK XDD1_RS18490 PF08400 Prophage tail fibre N-terminal XDD1_RS18490 PF03335 Phage tail fibre repeat XDD1_RS18490 PF07484 Phage Tail Collar Domain XDD1_RS18520 PF03527 RHS protein XDD1_RS18520 PF05593 RHS Repeat XDD1_RS18535 PF09134 Invasin, domain 3 XDD1_RS18535 PF02369 Bacterial Ig-like domain (group 1) XDD1_RS18535 PF07979 Intimin C-type lectin domain XDD1_RS18535 PF11924 Inverse autotransporter, beta-domain XDD1_RS18540 PF02369 Bacterial Ig-like domain (group 1) XDD1_RS18540 PF11924 Inverse autotransporter, beta-domain XDD1_RS18540 PF09134 Invasin, domain 3 XDD1_RS18550 PF02911 Formyl transferase, C-terminal domain XDD1_RS18550 PF00551 Formyl transferase XDD1_RS18550 PF01370 NAD dependent epimerase/dehydratase family