locus-tag class description XF_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix XF_RS00005 PF00308 Bacterial dnaA protein XF_RS00005 PF11638 DnaA N-terminal domain XF_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain XF_RS00010 PF02767 DNA polymerase III beta subunit, central domain XF_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain XF_RS00015 PF02463 RecF/RecN/SMC N terminal domain XF_RS00025 PF00204 DNA gyrase B XF_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus XF_RS00025 PF18053 DNA gyrase B subunit insert domain XF_RS00025 PF01751 Toprim domain XF_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS00035 PF01435 Peptidase family M48 XF_RS00045 PF03544 Gram-negative bacterial TonB protein C-terminal XF_RS00050 PF01618 MotA/TolQ/ExbB proton channel family XF_RS00055 PF02472 Biopolymer transport protein ExbD/TolR XF_RS00060 PF02472 Biopolymer transport protein ExbD/TolR XF_RS00075 PF01218 Coproporphyrinogen III oxidase XF_RS00100 PF00793 DAHP synthetase I family XF_RS00115 PF07963 Prokaryotic N-terminal methylation motif XF_RS00135 PF05567 Neisseria PilC beta-propeller domain XF_RS00145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XF_RS00150 PF00155 Aminotransferase class I and II XF_RS00160 PF01741 Large-conductance mechanosensitive channel, MscL XF_RS00175 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ XF_RS00185 PF02559 CarD-like/TRCF domain XF_RS00185 PF17757 UvrB interaction domain XF_RS00185 PF03461 TRCF domain XF_RS00185 PF00271 Helicase conserved C-terminal domain XF_RS00185 PF00270 DEAD/DEAH box helicase XF_RS00195 PF01220 Dehydroquinase class II XF_RS00200 PF00364 Biotin-requiring enzyme XF_RS00205 PF00289 Biotin carboxylase, N-terminal domain XF_RS00205 PF02785 Biotin carboxylase C-terminal domain XF_RS00205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XF_RS00210 PF13361 UvrD-like helicase C-terminal domain XF_RS00210 PF00580 UvrD/REP helicase N-terminal domain XF_RS00220 PF00970 Oxidoreductase FAD-binding domain XF_RS00220 PF00042 Globin XF_RS00220 PF00175 Oxidoreductase NAD-binding domain XF_RS00235 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XF_RS00240 PF08535 KorB domain XF_RS00240 PF06613 KorB C-terminal beta-barrel domain XF_RS00240 PF02195 ParB-like nuclease domain XF_RS00245 PF00156 Phosphoribosyl transferase domain XF_RS00250 PF06968 Biotin and Thiamin Synthesis associated domain XF_RS00250 PF04055 Radical SAM superfamily XF_RS00255 PF01734 Patatin-like phospholipase XF_RS00260 PF01040 UbiA prenyltransferase family XF_RS00295 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XF_RS00295 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XF_RS00300 PF01578 Cytochrome C assembly protein XF_RS00305 PF00448 SRP54-type protein, GTPase domain XF_RS00305 PF02881 SRP54-type protein, helical bundle domain XF_RS00305 PF02978 Signal peptide binding domain XF_RS00325 PF00419 Fimbrial protein XF_RS00330 PF00419 Fimbrial protein XF_RS00335 PF13954 PapC N-terminal domain XF_RS00335 PF00577 Outer membrane usher protein XF_RS00335 PF13953 PapC C-terminal domain XF_RS00340 PF02753 Pili assembly chaperone PapD, C-terminal domain XF_RS00340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XF_RS00345 PF16970 Type-1 fimbrial protein, A XF_RS00350 PF02464 Competence-damaged protein XF_RS00355 PF00083 Sugar (and other) transporter XF_RS00360 PF16360 GTP-binding GTPase Middle Region XF_RS00360 PF13167 GTP-binding GTPase N-terminal XF_RS00360 PF01926 50S ribosome-binding GTPase XF_RS00365 PF17209 Hfq protein XF_RS00375 PF00809 Pterin binding enzyme XF_RS00385 PF01434 Peptidase family M41 XF_RS00385 PF17862 AAA+ lid domain XF_RS00385 PF00004 ATPase family associated with various cellular activities (AAA) XF_RS00385 PF06480 FtsH Extracellular XF_RS00390 PF01728 FtsJ-like methyltransferase XF_RS00395 PF01985 CRS1 / YhbY (CRM) domain XF_RS00405 PF00920 Dehydratase family XF_RS00430 PF03279 Bacterial lipid A biosynthesis acyltransferase XF_RS00435 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XF_RS00445 PF00886 Ribosomal protein S16 XF_RS00450 PF01782 RimM N-terminal domain XF_RS00450 PF05239 PRC-barrel domain XF_RS00455 PF01746 tRNA (Guanine-1)-methyltransferase XF_RS00460 PF01245 Ribosomal protein L19 XF_RS00465 PF00557 Metallopeptidase family M24 XF_RS00470 PF00132 Bacterial transferase hexapeptide (six repeats) XF_RS00470 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XF_RS00470 PF14602 Hexapeptide repeat of succinyl-transferase XF_RS00475 PF03960 ArsC family XF_RS00480 PF01546 Peptidase family M20/M25/M40 XF_RS00480 PF07687 Peptidase dimerisation domain XF_RS00485 PF13537 Glutamine amidotransferase domain XF_RS00485 PF00733 Asparagine synthase XF_RS00495 PF03060 Nitronate monooxygenase XF_RS00500 PF01726 LexA DNA binding domain XF_RS00500 PF00717 Peptidase S24-like XF_RS00505 PF00154 recA bacterial DNA recombination protein XF_RS00510 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XF_RS00510 PF01411 tRNA synthetases class II (A) XF_RS00510 PF02272 DHHA1 domain XF_RS00515 PF02599 Global regulator protein family XF_RS00525 PF01432 Peptidase family M3 XF_RS00535 PF07732 Multicopper oxidase XF_RS00535 PF07731 Multicopper oxidase XF_RS00535 PF00394 Multicopper oxidase XF_RS00540 PF05275 Copper resistance protein B precursor (CopB) XF_RS00545 PF08264 Anticodon-binding domain of tRNA XF_RS00545 PF00133 tRNA synthetases class I (I, L, M and V) XF_RS00545 PF10458 Valyl tRNA synthetase tRNA binding arm XF_RS00565 PF02789 Cytosol aminopeptidase family, N-terminal domain XF_RS00565 PF00883 Cytosol aminopeptidase family, catalytic domain XF_RS00585 PF01380 SIS domain XF_RS00595 PF17284 Spermidine synthase tetramerisation domain XF_RS00600 PF17944 Arginine decarboxylase C-terminal helical extension XF_RS00600 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XF_RS00600 PF17810 Arginine decarboxylase helical bundle domain XF_RS00605 PF00106 short chain dehydrogenase XF_RS00615 PF05746 DALR anticodon binding domain XF_RS00615 PF00750 tRNA synthetases class I (R) XF_RS00615 PF03485 Arginyl tRNA synthetase N terminal domain XF_RS00620 PF04002 RadC-like JAB domain XF_RS00625 PF04127 DNA / pantothenate metabolism flavoprotein XF_RS00625 PF02441 Flavoprotein XF_RS00630 PF00692 dUTPase XF_RS00635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XF_RS00635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XF_RS00635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XF_RS00635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XF_RS00645 PF00156 Phosphoribosyl transferase domain XF_RS00680 PF07690 Major Facilitator Superfamily XF_RS00685 PF03702 Anhydro-N-acetylmuramic acid kinase XF_RS00690 PF04225 Opacity-associated protein A LysM-like domain XF_RS00690 PF01551 Peptidase family M23 XF_RS00695 PF00579 tRNA synthetases class I (W and Y) XF_RS00725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XF_RS00725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XF_RS00730 PF01578 Cytochrome C assembly protein XF_RS00745 PF00009 Elongation factor Tu GTP binding domain XF_RS00745 PF16658 Class II release factor RF3, C-terminal domain XF_RS00750 PF03006 Haemolysin-III related XF_RS00755 PF00535 Glycosyl transferase family 2 XF_RS00760 PF01026 TatD related DNase XF_RS00775 PF01597 Glycine cleavage H-protein XF_RS00780 PF01571 Aminomethyltransferase folate-binding domain XF_RS00780 PF08669 Glycine cleavage T-protein C-terminal barrel domain XF_RS00790 PF01145 SPFH domain / Band 7 family XF_RS00790 PF16200 C-terminal region of band_7 XF_RS00795 PF03819 MazG nucleotide pyrophosphohydrolase domain XF_RS00800 PF00459 Inositol monophosphatase family XF_RS00805 PF00293 NUDIX domain XF_RS00810 PF00202 Aminotransferase class-III XF_RS00815 PF04452 RNA methyltransferase XF_RS00820 PF00271 Helicase conserved C-terminal domain XF_RS00820 PF00270 DEAD/DEAH box helicase XF_RS00825 PF01242 6-pyruvoyl tetrahydropterin synthase XF_RS00855 PF03653 Uncharacterised protein family (UPF0093) XF_RS00860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XF_RS00865 PF02811 PHP domain XF_RS00865 PF01336 OB-fold nucleic acid binding domain XF_RS00865 PF14579 Helix-hairpin-helix motif XF_RS00865 PF17657 Bacterial DNA polymerase III alpha subunit finger domain XF_RS00865 PF07733 Bacterial DNA polymerase III alpha NTPase domain XF_RS00870 PF01259 SAICAR synthetase XF_RS00875 PF01556 DnaJ C terminal domain XF_RS00875 PF00684 DnaJ central domain XF_RS00875 PF00226 DnaJ domain XF_RS00880 PF00834 Ribulose-phosphate 3 epimerase family XF_RS00885 PF00425 chorismate binding enzyme XF_RS00885 PF04715 Anthranilate synthase component I, N terminal region XF_RS00890 PF00117 Glutamine amidotransferase class-I XF_RS00895 PF02885 Glycosyl transferase family, helical bundle domain XF_RS00895 PF00591 Glycosyl transferase family, a/b domain XF_RS00900 PF00218 Indole-3-glycerol phosphate synthase XF_RS00920 PF00557 Metallopeptidase family M24 XF_RS00920 PF01321 Creatinase/Prolidase N-terminal domain XF_RS00935 PF01702 Queuine tRNA-ribosyltransferase XF_RS00940 PF02699 Preprotein translocase subunit XF_RS00945 PF07549 SecD/SecF GG Motif XF_RS00945 PF13721 SecD export protein N-terminal TM region XF_RS00945 PF02355 Protein export membrane protein XF_RS00950 PF02355 Protein export membrane protein XF_RS00950 PF07549 SecD/SecF GG Motif XF_RS00960 PF01743 Poly A polymerase head domain XF_RS00960 PF12626 Polymerase A arginine-rich C-terminus XF_RS00960 PF12627 Probable RNA and SrmB- binding site of polymerase A XF_RS00965 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XF_RS00970 PF02548 Ketopantoate hydroxymethyltransferase XF_RS00975 PF02569 Pantoate-beta-alanine ligase XF_RS00980 PF02261 Aspartate decarboxylase XF_RS00985 PF00342 Phosphoglucose isomerase XF_RS01000 PF17384 RimP C-terminal SH3 domain XF_RS01000 PF02576 RimP N-terminal domain XF_RS01005 PF08529 NusA N-terminal domain XF_RS01005 PF00575 S1 RNA binding domain XF_RS01005 PF13184 NusA-like KH domain XF_RS01010 PF04760 Translation initiation factor IF-2, N-terminal region XF_RS01010 PF11987 Translation-initiation factor 2 XF_RS01010 PF00009 Elongation factor Tu GTP binding domain XF_RS01010 PF08364 Bacterial translation initiation factor IF-2 associated region XF_RS01015 PF02033 Ribosome-binding factor A XF_RS01020 PF09157 Pseudouridine synthase II TruB, C-terminal XF_RS01020 PF16198 tRNA pseudouridylate synthase B C-terminal domain XF_RS01020 PF01509 TruB family pseudouridylate synthase (N terminal domain) XF_RS01025 PF00312 Ribosomal protein S15 XF_RS01030 PF03725 3' exoribonuclease family, domain 2 XF_RS01030 PF01138 3' exoribonuclease family, domain 1 XF_RS01030 PF00575 S1 RNA binding domain XF_RS01030 PF00013 KH domain XF_RS01030 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XF_RS01035 PF01638 HxlR-like helix-turn-helix XF_RS01040 PF05368 NmrA-like family XF_RS01055 PF00873 AcrB/AcrD/AcrF family XF_RS01080 PF00270 DEAD/DEAH box helicase XF_RS01080 PF00271 Helicase conserved C-terminal domain XF_RS01080 PF03880 DbpA RNA binding domain XF_RS01085 PF00766 Electron transfer flavoprotein FAD-binding domain XF_RS01085 PF01012 Electron transfer flavoprotein domain XF_RS01090 PF01012 Electron transfer flavoprotein domain XF_RS01095 PF16363 GDP-mannose 4,6 dehydratase XF_RS01100 PF00483 Nucleotidyl transferase XF_RS01105 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XF_RS01110 PF04321 RmlD substrate binding domain XF_RS01115 PF01050 Mannose-6-phosphate isomerase XF_RS01115 PF00483 Nucleotidyl transferase XF_RS01120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XF_RS01120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XF_RS01120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XF_RS01120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XF_RS01145 PF12951 Passenger-associated-transport-repeat XF_RS01145 PF03797 Autotransporter beta-domain XF_RS01145 PF00082 Subtilase family XF_RS01150 PF06779 Uncharacterised MFS-type transporter YbfB XF_RS01160 PF00365 Phosphofructokinase XF_RS01170 PF02875 Mur ligase family, glutamate ligase domain XF_RS01170 PF01225 Mur ligase family, catalytic domain XF_RS01170 PF08245 Mur ligase middle domain XF_RS01175 PF01569 PAP2 superfamily XF_RS01185 PF02789 Cytosol aminopeptidase family, N-terminal domain XF_RS01185 PF00883 Cytosol aminopeptidase family, catalytic domain XF_RS01190 PF01594 AI-2E family transporter XF_RS01210 PF00595 PDZ domain XF_RS01215 PF01370 NAD dependent epimerase/dehydratase family XF_RS01215 PF08338 Domain of unknown function (DUF1731) XF_RS01220 PF13193 AMP-binding enzyme C-terminal domain XF_RS01220 PF00501 AMP-binding enzyme XF_RS01225 PF00694 Aconitase C-terminal domain XF_RS01225 PF00330 Aconitase family (aconitate hydratase) XF_RS01240 PF00330 Aconitase family (aconitate hydratase) XF_RS01240 PF06434 Aconitate hydratase 2 N-terminus XF_RS01240 PF11791 Aconitate B N-terminal domain XF_RS01260 PF12008 Type I restriction and modification enzyme - subunit R C terminal XF_RS01260 PF18766 SWI2/SNF2 ATPase XF_RS01260 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XF_RS01265 PF11867 Domain of unknown function (DUF3387) XF_RS01265 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XF_RS01265 PF18766 SWI2/SNF2 ATPase XF_RS01305 PF00121 Triosephosphate isomerase XF_RS01320 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XF_RS01325 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XF_RS01330 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XF_RS01335 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XF_RS01345 PF10531 SLBB domain XF_RS01345 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XF_RS01345 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XF_RS01350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XF_RS01350 PF00384 Molybdopterin oxidoreductase XF_RS01350 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal XF_RS01355 PF00146 NADH dehydrogenase XF_RS01360 PF12838 4Fe-4S dicluster domain XF_RS01365 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XF_RS01370 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XF_RS01375 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XF_RS01375 PF00361 Proton-conducting membrane transporter XF_RS01380 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus XF_RS01380 PF00361 Proton-conducting membrane transporter XF_RS01385 PF00361 Proton-conducting membrane transporter XF_RS01390 PF00106 short chain dehydrogenase XF_RS01395 PF03600 Citrate transporter XF_RS01405 PF00072 Response regulator receiver domain XF_RS01405 PF00486 Transcriptional regulatory protein, C terminal XF_RS01410 PF00512 His Kinase A (phospho-acceptor) domain XF_RS01410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS01410 PF08521 Two-component sensor kinase N-terminal XF_RS01425 PF07282 Putative transposase DNA-binding domain XF_RS01425 PF12323 Helix-turn-helix domain XF_RS01425 PF01385 Probable transposase XF_RS01455 PF02590 Predicted SPOUT methyltransferase XF_RS01460 PF07715 TonB-dependent Receptor Plug Domain XF_RS01460 PF00593 TonB dependent receptor XF_RS01465 PF02600 Disulfide bond formation protein DsbB XF_RS01475 PF00691 OmpA family XF_RS01475 PF05736 OprF membrane domain XF_RS01485 PF01565 FAD binding domain XF_RS01485 PF02913 FAD linked oxidases, C-terminal domain XF_RS01490 PF13291 ACT domain XF_RS01490 PF02824 TGS domain XF_RS01490 PF04607 Region found in RelA / SpoT proteins XF_RS01495 PF01042 Endoribonuclease L-PSP XF_RS01500 PF17191 RecG wedge domain XF_RS01500 PF00271 Helicase conserved C-terminal domain XF_RS01500 PF00270 DEAD/DEAH box helicase XF_RS01505 PF00067 Cytochrome P450 XF_RS01520 PF00772 DnaB-like helicase N terminal domain XF_RS01520 PF03796 DnaB-like helicase C terminal domain XF_RS01530 PF05736 OprF membrane domain XF_RS01530 PF00691 OmpA family XF_RS01535 PF00294 pfkB family carbohydrate kinase XF_RS01540 PF00248 Aldo/keto reductase family XF_RS01545 PF00905 Penicillin binding protein transpeptidase domain XF_RS01545 PF00912 Transglycosylase XF_RS01545 PF17092 Penicillin-binding protein OB-like domain XF_RS01550 PF11104 Type IV pilus assembly protein PilM; XF_RS01555 PF05137 Fimbrial assembly protein (PilN) XF_RS01560 PF04350 Pilus assembly protein, PilO XF_RS01565 PF04351 Pilus assembly protein, PilP XF_RS01570 PF03958 Bacterial type II/III secretion system short domain XF_RS01570 PF07660 Secretin and TonB N terminus short domain XF_RS01570 PF00263 Bacterial type II and III secretion system protein XF_RS01570 PF11741 AMIN domain XF_RS01580 PF08019 Phosphoethanolamine transferase EptA/EptB XF_RS01580 PF00884 Sulfatase XF_RS01585 PF00067 Cytochrome P450 XF_RS01590 PF02581 Thiamine monophosphate synthase XF_RS01595 PF00301 Rubredoxin XF_RS01600 PF10431 C-terminal, D2-small domain, of ClpB protein XF_RS01600 PF00004 ATPase family associated with various cellular activities (AAA) XF_RS01600 PF07724 AAA domain (Cdc48 subfamily) XF_RS01600 PF17871 AAA lid domain XF_RS01600 PF02861 Clp amino terminal domain, pathogenicity island component XF_RS01615 PF07715 TonB-dependent Receptor Plug Domain XF_RS01615 PF00593 TonB dependent receptor XF_RS01620 PF01207 Dihydrouridine synthase (Dus) XF_RS01630 PF00072 Response regulator receiver domain XF_RS01630 PF00486 Transcriptional regulatory protein, C terminal XF_RS01635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS01640 PF02773 S-adenosylmethionine synthetase, C-terminal domain XF_RS01640 PF02772 S-adenosylmethionine synthetase, central domain XF_RS01640 PF00438 S-adenosylmethionine synthetase, N-terminal domain XF_RS01655 PF00293 NUDIX domain XF_RS01665 PF00210 Ferritin-like domain XF_RS01675 PF00072 Response regulator receiver domain XF_RS01675 PF00486 Transcriptional regulatory protein, C terminal XF_RS01690 PF01521 Iron-sulphur cluster biosynthesis XF_RS01695 PF03741 Integral membrane protein TerC family XF_RS01700 PF10672 S-adenosylmethionine-dependent methyltransferase XF_RS01700 PF17785 PUA-like domain XF_RS01705 PF13520 Amino acid permease XF_RS01715 PF00005 ABC transporter XF_RS01720 PF02646 RmuC family XF_RS01730 PF04333 MlaA lipoprotein XF_RS01740 PF05494 MlaC protein XF_RS01745 PF02470 MlaD protein XF_RS01750 PF02405 Permease MlaE XF_RS01755 PF00005 ABC transporter XF_RS01760 PF17946 RecC C-terminal domain XF_RS01765 PF13361 UvrD-like helicase C-terminal domain XF_RS01765 PF12705 PD-(D/E)XK nuclease superfamily XF_RS01765 PF00580 UvrD/REP helicase N-terminal domain XF_RS01775 PF13538 UvrD-like helicase C-terminal domain XF_RS01780 PF00579 tRNA synthetases class I (W and Y) XF_RS01785 PF01807 CHC2 zinc finger XF_RS01785 PF08275 DNA primase catalytic core, N-terminal domain XF_RS01785 PF08278 DNA primase DnaG DnaB-binding XF_RS01785 PF10410 DnaB-helicase binding domain of primase XF_RS01790 PF03631 Virulence factor BrkB XF_RS01795 PF09424 Yqey-like protein XF_RS01800 PF01165 Ribosomal protein S21 XF_RS01805 PF00814 Glycoprotease family XF_RS01810 PF02152 Dihydroneopterin aldolase XF_RS01815 PF00924 Mechanosensitive ion channel XF_RS01820 PF01915 Glycosyl hydrolase family 3 C-terminal domain XF_RS01820 PF14310 Fibronectin type III-like domain XF_RS01820 PF00933 Glycosyl hydrolase family 3 N terminal domain XF_RS01835 PF01066 CDP-alcohol phosphatidyltransferase XF_RS01845 PF04073 Aminoacyl-tRNA editing domain XF_RS01845 PF03129 Anticodon binding domain XF_RS01845 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XF_RS01860 PF00072 Response regulator receiver domain XF_RS01865 PF08240 Alcohol dehydrogenase GroES-like domain XF_RS01865 PF00107 Zinc-binding dehydrogenase XF_RS01870 PF12221 Bacterial membrane protein N terminal XF_RS01870 PF01145 SPFH domain / Band 7 family XF_RS01875 PF01145 SPFH domain / Band 7 family XF_RS01885 PF00709 Adenylosuccinate synthetase XF_RS01890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XF_RS01890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XF_RS01895 PF00334 Nucleoside diphosphate kinase XF_RS01900 PF04055 Radical SAM superfamily XF_RS01920 PF13360 PQQ-like domain XF_RS01920 PF01011 PQQ enzyme repeat XF_RS01925 PF01926 50S ribosome-binding GTPase XF_RS01925 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XF_RS01930 PF00899 ThiF family XF_RS01940 PF12792 CSS motif domain associated with EAL XF_RS01940 PF00563 EAL domain XF_RS01950 PF14245 Type IV pilin PilA XF_RS01950 PF07963 Prokaryotic N-terminal methylation motif XF_RS01970 PF05567 Neisseria PilC beta-propeller domain XF_RS01975 PF07963 Prokaryotic N-terminal methylation motif XF_RS01975 PF00114 Pilin (bacterial filament) XF_RS01995 PF00436 Single-strand binding protein family XF_RS02015 PF07963 Prokaryotic N-terminal methylation motif XF_RS02065 PF06114 IrrE N-terminal-like domain XF_RS02085 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT XF_RS02105 PF01807 CHC2 zinc finger XF_RS02105 PF08275 DNA primase catalytic core, N-terminal domain XF_RS02105 PF10410 DnaB-helicase binding domain of primase XF_RS02105 PF08278 DNA primase DnaG DnaB-binding XF_RS02140 PF00574 Clp protease XF_RS02155 PF00959 Phage lysozyme XF_RS02200 PF09356 Phage conserved hypothetical protein BR0599 XF_RS02200 PF09931 Uncharacterized conserved protein (DUF2163) XF_RS02265 PF12323 Helix-turn-helix domain XF_RS02265 PF01385 Probable transposase XF_RS02265 PF07282 Putative transposase DNA-binding domain XF_RS02275 PF07963 Prokaryotic N-terminal methylation motif XF_RS02275 PF00114 Pilin (bacterial filament) XF_RS02280 PF07963 Prokaryotic N-terminal methylation motif XF_RS02280 PF08334 Type II secretion system (T2SS), protein G XF_RS02300 PF04060 Putative Fe-S cluster XF_RS02305 PF01588 Putative tRNA binding domain XF_RS02305 PF09334 tRNA synthetases class I (M) XF_RS02310 PF00593 TonB dependent receptor XF_RS02310 PF07715 TonB-dependent Receptor Plug Domain XF_RS02315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XF_RS02320 PF04348 LppC putative lipoprotein XF_RS02325 PF02021 Uncharacterised protein family UPF0102 XF_RS02330 PF03193 RsgA GTPase XF_RS02335 PF00127 Copper binding proteins, plastocyanin/azurin family XF_RS02345 PF00958 GMP synthase C terminal domain XF_RS02345 PF00117 Glutamine amidotransferase class-I XF_RS02355 PF00902 Sec-independent protein translocase protein (TatC) XF_RS02360 PF02416 mttA/Hcf106 family XF_RS02365 PF02416 mttA/Hcf106 family XF_RS02375 PF00762 Ferrochelatase XF_RS02385 PF04381 Putative exonuclease, RdgC XF_RS02390 PF01171 PP-loop family XF_RS02400 PF07977 FabA-like domain XF_RS02415 PF05649 Peptidase family M13 XF_RS02415 PF01431 Peptidase family M13 XF_RS02420 PF02223 Thymidylate kinase XF_RS02435 PF00551 Formyl transferase XF_RS02440 PF00586 AIR synthase related protein, N-terminal domain XF_RS02440 PF02769 AIR synthase related protein, C-terminal domain XF_RS02450 PF01594 AI-2E family transporter XF_RS02455 PF00308 Bacterial dnaA protein XF_RS02460 PF00483 Nucleotidyl transferase XF_RS02465 PF01636 Phosphotransferase enzyme family XF_RS02475 PF02424 ApbE family XF_RS02495 PF18331 PKHD-type hydroxylase C-terminal domain XF_RS02495 PF13640 2OG-Fe(II) oxygenase superfamily XF_RS02500 PF00593 TonB dependent receptor XF_RS02500 PF07715 TonB-dependent Receptor Plug Domain XF_RS02520 PF00291 Pyridoxal-phosphate dependent enzyme XF_RS02535 PF16363 GDP-mannose 4,6 dehydratase XF_RS02540 PF16363 GDP-mannose 4,6 dehydratase XF_RS02545 PF01370 NAD dependent epimerase/dehydratase family XF_RS02570 PF00118 TCP-1/cpn60 chaperonin family XF_RS02575 PF00166 Chaperonin 10 Kd subunit XF_RS02580 PF03091 CutA1 divalent ion tolerance protein XF_RS02585 PF02683 Cytochrome C biogenesis protein transmembrane region XF_RS02585 PF11412 Disulphide bond corrector protein DsbC XF_RS02590 PF02581 Thiamine monophosphate synthase XF_RS02590 PF08543 Phosphomethylpyrimidine kinase XF_RS02595 PF08501 Shikimate dehydrogenase substrate binding domain XF_RS02595 PF01488 Shikimate / quinate 5-dehydrogenase XF_RS02595 PF18317 Shikimate 5'-dehydrogenase C-terminal domain XF_RS02675 PF01555 DNA methylase XF_RS02685 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XF_RS02685 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XF_RS02695 PF10576 Iron-sulfur binding domain of endonuclease III XF_RS02695 PF00730 HhH-GPD superfamily base excision DNA repair protein XF_RS02695 PF00633 Helix-hairpin-helix motif XF_RS02705 PF04235 Protein of unknown function (DUF418) XF_RS02710 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XF_RS02715 PF00877 NlpC/P60 family XF_RS02720 PF00877 NlpC/P60 family XF_RS02730 PF00375 Sodium:dicarboxylate symporter family XF_RS02735 PF00245 Alkaline phosphatase XF_RS02740 PF09179 TilS substrate binding domain XF_RS02740 PF01171 PP-loop family XF_RS02740 PF11734 TilS substrate C-terminal domain XF_RS02745 PF02609 Exonuclease VII small subunit XF_RS02750 PF00348 Polyprenyl synthetase XF_RS02775 PF06594 Haemolysin-type calcium binding protein related domain XF_RS02775 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XF_RS02780 PF00456 Transketolase, thiamine diphosphate binding domain XF_RS02780 PF17831 Pyruvate dehydrogenase E1 component middle domain XF_RS02785 PF00698 Acyl transferase domain XF_RS02795 PF00550 Phosphopantetheine attachment site XF_RS02800 PF00109 Beta-ketoacyl synthase, N-terminal domain XF_RS02800 PF02801 Beta-ketoacyl synthase, C-terminal domain XF_RS02805 PF00425 chorismate binding enzyme XF_RS02805 PF04715 Anthranilate synthase component I, N terminal region XF_RS02810 PF02618 YceG-like family XF_RS02815 PF09115 DNA polymerase III, delta subunit, C terminal XF_RS02975 PF00959 Phage lysozyme XF_RS03045 PF01381 Helix-turn-helix XF_RS03075 PF17482 Phage tail sheath C-terminal domain XF_RS03075 PF04984 Phage tail sheath protein subtilisin-like domain XF_RS03120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XF_RS03120 PF02824 TGS domain XF_RS03120 PF03129 Anticodon binding domain XF_RS03120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XF_RS03125 PF05198 Translation initiation factor IF-3, N-terminal domain XF_RS03125 PF00707 Translation initiation factor IF-3, C-terminal domain XF_RS03130 PF01632 Ribosomal protein L35 XF_RS03135 PF00453 Ribosomal protein L20 XF_RS03140 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XF_RS03140 PF01409 tRNA synthetases class II core domain (F) XF_RS03145 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain XF_RS03145 PF01588 Putative tRNA binding domain XF_RS03145 PF03483 B3/4 domain XF_RS03145 PF03484 tRNA synthetase B5 domain XF_RS03145 PF03147 Ferredoxin-fold anticodon binding domain XF_RS03150 PF00216 Bacterial DNA-binding protein XF_RS03165 PF18125 RlmM ferredoxin-like domain XF_RS03165 PF01728 FtsJ-like methyltransferase XF_RS03175 PF01612 3'-5' exonuclease XF_RS03175 PF00570 HRDC domain XF_RS03190 PF02601 Exonuclease VII, large subunit XF_RS03190 PF13742 OB-fold nucleic acid binding domain XF_RS03195 PF01256 Carbohydrate kinase XF_RS03195 PF03853 YjeF-related protein N-terminus XF_RS03200 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE XF_RS03205 PF11741 AMIN domain XF_RS03205 PF01520 N-acetylmuramoyl-L-alanine amidase XF_RS03210 PF01119 DNA mismatch repair protein, C-terminal domain XF_RS03210 PF08676 MutL C terminal dimerisation domain XF_RS03220 PF00692 dUTPase XF_RS03225 PF01925 Sulfite exporter TauE/SafE XF_RS03235 PF04143 Sulphur transport XF_RS03245 PF04273 Putative phosphatase (DUF442) XF_RS03245 PF00753 Metallo-beta-lactamase superfamily XF_RS03270 PF07977 FabA-like domain XF_RS03300 PF01757 Acyltransferase family XF_RS03325 PF02597 ThiS family XF_RS03325 PF05690 Thiazole biosynthesis protein ThiG XF_RS03330 PF05690 Thiazole biosynthesis protein ThiG XF_RS03335 PF02390 Putative methyltransferase XF_RS03340 PF02080 TrkA-C domain XF_RS03340 PF03600 Citrate transporter XF_RS03350 PF02381 MraZ protein, putative antitoxin-like XF_RS03355 PF01795 MraW methylase family XF_RS03360 PF04999 Cell division protein FtsL XF_RS03365 PF03717 Penicillin-binding Protein dimerisation domain XF_RS03365 PF00905 Penicillin binding protein transpeptidase domain XF_RS03370 PF01225 Mur ligase family, catalytic domain XF_RS03370 PF02875 Mur ligase family, glutamate ligase domain XF_RS03370 PF08245 Mur ligase middle domain XF_RS03375 PF02875 Mur ligase family, glutamate ligase domain XF_RS03375 PF01225 Mur ligase family, catalytic domain XF_RS03375 PF08245 Mur ligase middle domain XF_RS03380 PF00953 Glycosyl transferase family 4 XF_RS03385 PF01098 Cell cycle protein XF_RS03390 PF03033 Glycosyltransferase family 28 N-terminal domain XF_RS03390 PF04101 Glycosyltransferase family 28 C-terminal domain XF_RS03395 PF08245 Mur ligase middle domain XF_RS03395 PF02875 Mur ligase family, glutamate ligase domain XF_RS03395 PF01225 Mur ligase family, catalytic domain XF_RS03400 PF07478 D-ala D-ala ligase C-terminus XF_RS03405 PF08478 POTRA domain, FtsQ-type XF_RS03405 PF03799 Cell division protein FtsQ XF_RS03410 PF02491 SHS2 domain inserted in FTSA XF_RS03415 PF00091 Tubulin/FtsZ family, GTPase domain XF_RS03415 PF12327 FtsZ family, C-terminal domain XF_RS03420 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XF_RS03430 PF08525 Opacity-associated protein A N-terminal motif XF_RS03430 PF01476 LysM domain XF_RS03430 PF01551 Peptidase family M23 XF_RS03435 PF02810 SEC-C motif XF_RS03435 PF07517 SecA DEAD-like domain XF_RS03435 PF07516 SecA Wing and Scaffold domain XF_RS03435 PF01043 SecA preprotein cross-linking domain XF_RS03440 PF03330 Lytic transglycolase XF_RS03455 PF00675 Insulinase (Peptidase family M16) XF_RS03455 PF05193 Peptidase M16 inactive domain XF_RS03460 PF00150 Cellulase (glycosyl hydrolase family 5) XF_RS03460 PF00553 Cellulose binding domain XF_RS03470 PF01475 Ferric uptake regulator family XF_RS03475 PF00749 tRNA synthetases class I (E and Q), catalytic domain XF_RS03480 PF00162 Phosphoglycerate kinase XF_RS03485 PF00224 Pyruvate kinase, barrel domain XF_RS03485 PF02887 Pyruvate kinase, alpha/beta domain XF_RS03490 PF00274 Fructose-bisphosphate aldolase class-I XF_RS03510 PF00291 Pyridoxal-phosphate dependent enzyme XF_RS03520 PF03466 LysR substrate binding domain XF_RS03520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XF_RS03525 PF01494 FAD binding domain XF_RS03530 PF01494 FAD binding domain XF_RS03535 PF04453 LPS transport system D XF_RS03540 PF09312 SurA N-terminal domain XF_RS03540 PF00639 PPIC-type PPIASE domain XF_RS03545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XF_RS03550 PF01301 Glycosyl hydrolases family 35 XF_RS03555 PF17678 Glycosyl hydrolase family 92 N-terminal domain XF_RS03555 PF07971 Glycosyl hydrolase family 92 XF_RS03570 PF14310 Fibronectin type III-like domain XF_RS03570 PF01915 Glycosyl hydrolase family 3 C-terminal domain XF_RS03570 PF07691 PA14 domain XF_RS03570 PF00933 Glycosyl hydrolase family 3 N terminal domain XF_RS03580 PF02838 Glycosyl hydrolase family 20, domain 2 XF_RS03580 PF00728 Glycosyl hydrolase family 20, catalytic domain XF_RS03580 PF07691 PA14 domain XF_RS03585 PF00704 Glycosyl hydrolases family 18 XF_RS03585 PF01476 LysM domain XF_RS03590 PF01641 SelR domain XF_RS03595 PF01266 FAD dependent oxidoreductase XF_RS03600 PF01168 Alanine racemase, N-terminal domain XF_RS03600 PF00842 Alanine racemase, C-terminal domain XF_RS03605 PF00512 His Kinase A (phospho-acceptor) domain XF_RS03605 PF00989 PAS fold XF_RS03605 PF16736 Single Cache-like XF_RS03605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS03615 PF01551 Peptidase family M23 XF_RS03615 PF01476 LysM domain XF_RS03620 PF09335 SNARE associated Golgi protein XF_RS03630 PF01975 Survival protein SurE XF_RS03635 PF01551 Peptidase family M23 XF_RS03640 PF00561 alpha/beta hydrolase fold XF_RS03645 PF01053 Cys/Met metabolism PLP-dependent enzyme XF_RS03650 PF01545 Cation efflux family XF_RS03660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XF_RS03660 PF07992 Pyridine nucleotide-disulphide oxidoreductase XF_RS03665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XF_RS03665 PF00364 Biotin-requiring enzyme XF_RS03665 PF02817 e3 binding domain XF_RS03675 PF03180 NLPA lipoprotein XF_RS03680 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS03685 PF09383 NIL domain XF_RS03685 PF00005 ABC transporter XF_RS03690 PF01522 Polysaccharide deacetylase XF_RS03700 PF00484 Carbonic anhydrase XF_RS03710 PF13307 Helicase C-terminal domain XF_RS03710 PF04851 Type III restriction enzyme, res subunit XF_RS03720 PF14814 Bifunctional transglycosylase second domain XF_RS03720 PF00905 Penicillin binding protein transpeptidase domain XF_RS03720 PF00912 Transglycosylase XF_RS03855 PF03471 Transporter associated domain XF_RS03855 PF00571 CBS domain XF_RS03865 PF02130 Uncharacterized protein family UPF0054 XF_RS03870 PF02562 PhoH-like protein XF_RS03875 PF04055 Radical SAM superfamily XF_RS03875 PF00919 Uncharacterized protein family UPF0004 XF_RS03875 PF01938 TRAM domain XF_RS03880 PF01464 Transglycosylase SLT domain XF_RS03885 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XF_RS03885 PF00355 Rieske [2Fe-2S] domain XF_RS03890 PF00032 Cytochrome b(C-terminal)/b6/petD XF_RS03890 PF00033 Cytochrome b/b6/petB XF_RS03895 PF02167 Cytochrome C1 family XF_RS03900 PF00043 Glutathione S-transferase, C-terminal domain XF_RS03900 PF02798 Glutathione S-transferase, N-terminal domain XF_RS03905 PF04386 Stringent starvation protein B XF_RS03940 PF01300 Telomere recombination XF_RS03945 PF01751 Toprim domain XF_RS03945 PF01131 DNA topoisomerase XF_RS03945 PF13368 Topoisomerase C-terminal repeat XF_RS03955 PF04361 Protein of unknown function (DUF494) XF_RS03960 PF17782 DprA winged helix domain XF_RS03960 PF02481 DNA recombination-mediator protein A XF_RS03970 PF01327 Polypeptide deformylase XF_RS03975 PF02911 Formyl transferase, C-terminal domain XF_RS03975 PF00551 Formyl transferase XF_RS03980 PF01189 16S rRNA methyltransferase RsmB/F XF_RS03980 PF01029 NusB family XF_RS03985 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase XF_RS04000 PF07664 Ferrous iron transport protein B C terminus XF_RS04000 PF17910 FeoB cytosolic helical domain XF_RS04000 PF07670 Nucleoside recognition XF_RS04000 PF04023 FeoA domain XF_RS04000 PF02421 Ferrous iron transport protein B XF_RS04020 PF13525 Outer membrane lipoprotein XF_RS04025 PF01479 S4 domain XF_RS04025 PF00849 RNA pseudouridylate synthase XF_RS04030 PF02578 Multi-copper polyphenol oxidoreductase laccase XF_RS04035 PF04134 Protein of unknown function, DUF393 XF_RS04040 PF06039 Malate:quinone oxidoreductase (Mqo) XF_RS04045 PF12848 ABC transporter XF_RS04045 PF00005 ABC transporter XF_RS04050 PF00464 Serine hydroxymethyltransferase XF_RS04060 PF03477 ATP cone domain XF_RS04065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XF_RS04065 PF01872 RibD C-terminal domain XF_RS04070 PF00677 Lumazine binding domain XF_RS04075 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XF_RS04075 PF00925 GTP cyclohydrolase II XF_RS04080 PF00885 6,7-dimethyl-8-ribityllumazine synthase XF_RS04085 PF01029 NusB family XF_RS04090 PF00586 AIR synthase related protein, N-terminal domain XF_RS04090 PF02769 AIR synthase related protein, C-terminal domain XF_RS04110 PF00578 AhpC/TSA family XF_RS04120 PF00701 Dihydrodipicolinate synthetase family XF_RS04135 PF17757 UvrB interaction domain XF_RS04135 PF00271 Helicase conserved C-terminal domain XF_RS04135 PF02151 UvrB/uvrC motif XF_RS04135 PF04851 Type III restriction enzyme, res subunit XF_RS04135 PF12344 Ultra-violet resistance protein B XF_RS04160 PF00072 Response regulator receiver domain XF_RS04160 PF00196 Bacterial regulatory proteins, luxR family XF_RS04165 PF00512 His Kinase A (phospho-acceptor) domain XF_RS04165 PF09456 RcsC Alpha-Beta-Loop (ABL) XF_RS04165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS04165 PF00072 Response regulator receiver domain XF_RS04180 PF00375 Sodium:dicarboxylate symporter family XF_RS04185 PF01515 Phosphate acetyl/butaryl transferase XF_RS04185 PF03949 Malic enzyme, NAD binding domain XF_RS04185 PF00390 Malic enzyme, N-terminal domain XF_RS04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS04190 PF00183 Hsp90 protein XF_RS04200 PF01467 Cytidylyltransferase-like XF_RS04210 PF00037 4Fe-4S binding domain XF_RS04220 PF00990 Diguanylate cyclase, GGDEF domain XF_RS04225 PF08460 Bacterial SH3 domain XF_RS04225 PF01551 Peptidase family M23 XF_RS04230 PF01979 Amidohydrolase family XF_RS04235 PF01809 Putative membrane protein insertion efficiency factor XF_RS04240 PF01258 Prokaryotic dksA/traR C4-type zinc finger XF_RS04250 PF05977 Transmembrane secretion effector XF_RS04255 PF02657 Fe-S metabolism associated domain XF_RS04260 PF09190 DALR domain XF_RS04260 PF01406 tRNA synthetases class I (C) catalytic domain XF_RS04270 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XF_RS04270 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XF_RS04275 PF00764 Arginosuccinate synthase XF_RS04280 PF01546 Peptidase family M20/M25/M40 XF_RS04280 PF07687 Peptidase dimerisation domain XF_RS04285 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase XF_RS04285 PF00696 Amino acid kinase family XF_RS04290 PF01118 Semialdehyde dehydrogenase, NAD binding domain XF_RS04295 PF00206 Lyase XF_RS04300 PF00696 Amino acid kinase family XF_RS04300 PF01472 PUA domain XF_RS04305 PF00171 Aldehyde dehydrogenase family XF_RS04335 PF06594 Haemolysin-type calcium binding protein related domain XF_RS04335 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XF_RS04340 PF14437 MafB19-like deaminase XF_RS04345 PF02742 Iron dependent repressor, metal binding and dimerisation domain XF_RS04345 PF01325 Iron dependent repressor, N-terminal DNA binding domain XF_RS04350 PF01566 Natural resistance-associated macrophage protein XF_RS04355 PF04377 Arginine-tRNA-protein transferase, C terminus XF_RS04355 PF04376 Arginine-tRNA-protein transferase, N terminus XF_RS04375 PF03797 Autotransporter beta-domain XF_RS04375 PF12951 Passenger-associated-transport-repeat XF_RS04375 PF00082 Subtilase family XF_RS04390 PF01553 Acyltransferase XF_RS04405 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XF_RS04405 PF05221 S-adenosyl-L-homocysteine hydrolase XF_RS04415 PF01351 Ribonuclease HII XF_RS04420 PF02684 Lipid-A-disaccharide synthetase XF_RS04425 PF00132 Bacterial transferase hexapeptide (six repeats) XF_RS04425 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XF_RS04430 PF07977 FabA-like domain XF_RS04435 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XF_RS04435 PF00132 Bacterial transferase hexapeptide (six repeats) XF_RS04440 PF01103 Surface antigen XF_RS04440 PF07244 Surface antigen variable number repeat XF_RS04445 PF17820 PDZ domain XF_RS04445 PF02163 Peptidase family M50 XF_RS04450 PF13288 DXP reductoisomerase C-terminal domain XF_RS04450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XF_RS04450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain XF_RS04460 PF01255 Putative undecaprenyl diphosphate synthase XF_RS04465 PF01765 Ribosome recycling factor XF_RS04470 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XF_RS04485 PF00696 Amino acid kinase family XF_RS04510 PF01081 KDPG and KHG aldolase XF_RS04515 PF00920 Dehydratase family XF_RS04520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XF_RS04525 PF02685 Glucokinase XF_RS04530 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XF_RS04530 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XF_RS04535 PF17912 MalK OB fold domain XF_RS04535 PF00005 ABC transporter XF_RS04540 PF01571 Aminomethyltransferase folate-binding domain XF_RS04550 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XF_RS04555 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XF_RS04560 PF00890 FAD binding domain XF_RS04560 PF02910 Fumarate reductase flavoprotein C-term XF_RS04565 PF13085 2Fe-2S iron-sulfur cluster binding domain XF_RS04570 PF03937 Flavinator of succinate dehydrogenase XF_RS04580 PF12704 MacB-like periplasmic core domain XF_RS04580 PF02687 FtsX-like permease family XF_RS04585 PF00005 ABC transporter XF_RS04590 PF03772 Competence protein XF_RS04590 PF00753 Metallo-beta-lactamase superfamily XF_RS04595 PF01618 MotA/TolQ/ExbB proton channel family XF_RS04605 PF00005 ABC transporter XF_RS04605 PF00664 ABC transporter transmembrane region XF_RS04610 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XF_RS04625 PF04264 YceI-like domain XF_RS04630 PF13091 PLD-like domain XF_RS04640 PF03358 NADPH-dependent FMN reductase XF_RS04645 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XF_RS04645 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain XF_RS04660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XF_RS04660 PF01612 3'-5' exonuclease XF_RS04660 PF01367 5'-3' exonuclease, C-terminal SAM fold XF_RS04660 PF00476 DNA polymerase family A XF_RS04670 PF01113 Dihydrodipicolinate reductase, N-terminus XF_RS04670 PF05173 Dihydrodipicolinate reductase, C-terminus XF_RS04675 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XF_RS04675 PF00117 Glutamine amidotransferase class-I XF_RS04680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XF_RS04680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XF_RS04680 PF02142 MGS-like domain XF_RS04685 PF03449 Transcription elongation factor, N-terminal XF_RS04685 PF01272 Transcription elongation factor, GreA/GreB, C-term XF_RS04695 PF01368 DHH family XF_RS04695 PF02272 DHHA1 domain XF_RS04695 PF17768 RecJ OB domain XF_RS04700 PF03462 PCRF domain XF_RS04700 PF00472 RF-1 domain XF_RS04705 PF00152 tRNA synthetases class II (D, K and N) XF_RS04705 PF01336 OB-fold nucleic acid binding domain XF_RS04710 PF00072 Response regulator receiver domain XF_RS04715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS04715 PF00072 Response regulator receiver domain XF_RS04715 PF01627 Hpt domain XF_RS04715 PF00512 His Kinase A (phospho-acceptor) domain XF_RS04720 PF00378 Enoyl-CoA hydratase/isomerase XF_RS04725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XF_RS04725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XF_RS04735 PF08245 Mur ligase middle domain XF_RS04745 PF00293 NUDIX domain XF_RS04750 PF02219 Methylenetetrahydrofolate reductase XF_RS04760 PF02545 Maf-like protein XF_RS04765 PF00575 S1 RNA binding domain XF_RS04765 PF10150 Ribonuclease E/G family XF_RS04775 PF01523 Putative modulator of DNA gyrase XF_RS04780 PF04751 Protein of unknown function (DUF615) XF_RS04785 PF01523 Putative modulator of DNA gyrase XF_RS04790 PF03466 LysR substrate binding domain XF_RS04790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XF_RS04795 PF00258 Flavodoxin XF_RS04805 PF00107 Zinc-binding dehydrogenase XF_RS04805 PF08240 Alcohol dehydrogenase GroES-like domain XF_RS04820 PF12804 MobA-like NTP transferase domain XF_RS04820 PF14602 Hexapeptide repeat of succinyl-transferase XF_RS04820 PF00132 Bacterial transferase hexapeptide (six repeats) XF_RS04830 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XF_RS04830 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XF_RS04835 PF02874 ATP synthase alpha/beta family, beta-barrel domain XF_RS04835 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XF_RS04840 PF00231 ATP synthase XF_RS04845 PF02874 ATP synthase alpha/beta family, beta-barrel domain XF_RS04845 PF00306 ATP synthase alpha/beta chain, C terminal domain XF_RS04845 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XF_RS04850 PF00213 ATP synthase delta (OSCP) subunit XF_RS04855 PF00430 ATP synthase B/B' CF(0) XF_RS04860 PF00137 ATP synthase subunit C XF_RS04865 PF00119 ATP synthase A chain XF_RS04870 PF00338 Ribosomal protein S10p/S20e XF_RS04875 PF00297 Ribosomal protein L3 XF_RS04880 PF00573 Ribosomal protein L4/L1 family XF_RS04885 PF00276 Ribosomal protein L23 XF_RS04890 PF00181 Ribosomal Proteins L2, RNA binding domain XF_RS04890 PF03947 Ribosomal Proteins L2, C-terminal domain XF_RS04900 PF00237 Ribosomal protein L22p/L17e XF_RS04905 PF00189 Ribosomal protein S3, C-terminal domain XF_RS04905 PF07650 KH domain XF_RS04910 PF00252 Ribosomal protein L16p/L10e XF_RS04915 PF00831 Ribosomal L29 protein XF_RS04920 PF00366 Ribosomal protein S17 XF_RS04925 PF00238 Ribosomal protein L14p/L23e XF_RS04930 PF00467 KOW motif XF_RS04930 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 XF_RS04935 PF00673 ribosomal L5P family C-terminus XF_RS04935 PF00281 Ribosomal protein L5 XF_RS04940 PF00410 Ribosomal protein S8 XF_RS04945 PF00347 Ribosomal protein L6 XF_RS04950 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast XF_RS04955 PF00333 Ribosomal protein S5, N-terminal domain XF_RS04955 PF03719 Ribosomal protein S5, C-terminal domain XF_RS04960 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A XF_RS04965 PF00344 SecY translocase XF_RS04970 PF00416 Ribosomal protein S13/S18 XF_RS04975 PF00411 Ribosomal protein S11 XF_RS04980 PF01479 S4 domain XF_RS04980 PF00163 Ribosomal protein S4/S9 N-terminal domain XF_RS04985 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XF_RS04985 PF01000 RNA polymerase Rpb3/RpoA insert domain XF_RS04985 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XF_RS04990 PF01196 Ribosomal protein L17 XF_RS04995 PF04380 Membrane fusogenic activity XF_RS05000 PF01078 Magnesium chelatase, subunit ChlI XF_RS05000 PF13335 Magnesium chelatase, subunit ChlI C-terminal XF_RS05005 PF00561 alpha/beta hydrolase fold XF_RS05010 PF03280 Proteobacterial lipase chaperone protein XF_RS05020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XF_RS05020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XF_RS05020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XF_RS05035 PF05698 Bacterial trigger factor protein (TF) C-terminus XF_RS05035 PF05697 Bacterial trigger factor protein (TF) XF_RS05040 PF00574 Clp protease XF_RS05045 PF10431 C-terminal, D2-small domain, of ClpB protein XF_RS05045 PF06689 ClpX C4-type zinc finger XF_RS05045 PF07724 AAA domain (Cdc48 subfamily) XF_RS05050 PF00004 ATPase family associated with various cellular activities (AAA) XF_RS05050 PF05362 Lon protease (S16) C-terminal proteolytic domain XF_RS05050 PF02190 ATP-dependent protease La (LON) substrate-binding domain XF_RS05055 PF00216 Bacterial DNA-binding protein XF_RS05085 PF03477 ATP cone domain XF_RS05085 PF02867 Ribonucleotide reductase, barrel domain XF_RS05085 PF00317 Ribonucleotide reductase, all-alpha domain XF_RS05090 PF00268 Ribonucleotide reductase, small chain XF_RS05105 PF00849 RNA pseudouridylate synthase XF_RS05105 PF01479 S4 domain XF_RS05110 PF13419 Haloacid dehalogenase-like hydrolase XF_RS05125 PF00830 Ribosomal L28 family XF_RS05130 PF00471 Ribosomal protein L33 XF_RS05135 PF13091 PLD-like domain XF_RS05135 PF13396 Phospholipase_D-nuclease N-terminal XF_RS05140 PF02798 Glutathione S-transferase, N-terminal domain XF_RS05140 PF00043 Glutathione S-transferase, C-terminal domain XF_RS05145 PF00056 lactate/malate dehydrogenase, NAD binding domain XF_RS05145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XF_RS05150 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XF_RS05155 PF00009 Elongation factor Tu GTP binding domain XF_RS05155 PF03144 Elongation factor Tu domain 2 XF_RS05155 PF00679 Elongation factor G C-terminus XF_RS05165 PF00529 HlyD membrane-fusion protein of T1SS XF_RS05165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XF_RS05175 PF03412 Peptidase C39 family XF_RS05175 PF00664 ABC transporter transmembrane region XF_RS05175 PF00005 ABC transporter XF_RS05180 PF01061 ABC-2 type transporter XF_RS05185 PF00005 ABC transporter XF_RS05190 PF05567 Neisseria PilC beta-propeller domain XF_RS05205 PF08482 ATP-dependent helicase C-terminal XF_RS05205 PF00271 Helicase conserved C-terminal domain XF_RS05205 PF04408 Helicase associated domain (HA2) XF_RS05205 PF00270 DEAD/DEAH box helicase XF_RS05210 PF13185 GAF domain XF_RS05215 PF01103 Surface antigen XF_RS05215 PF17243 POTRA domain TamA domain 1 XF_RS05220 PF04357 TamB, inner membrane protein subunit of TAM complex XF_RS05265 PF04303 PrpF protein XF_RS05295 PF07703 Alpha-2-macroglobulin bait region domain XF_RS05295 PF11974 Bacterial alpha-2-macroglobulin MG3 domain XF_RS05295 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain XF_RS05295 PF17962 Bacterial macroglobulin domain 6 XF_RS05295 PF01835 MG2 domain XF_RS05295 PF00207 Alpha-2-macroglobulin family XF_RS05295 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain XF_RS05295 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain XF_RS05300 PF07859 alpha/beta hydrolase fold XF_RS05305 PF12833 Helix-turn-helix domain XF_RS05305 PF12852 Cupin XF_RS05320 PF00929 Exonuclease XF_RS05325 PF05552 Conserved TM helix XF_RS05325 PF00924 Mechanosensitive ion channel XF_RS05330 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XF_RS05330 PF02896 PEP-utilising enzyme, TIM barrel domain XF_RS05330 PF00391 PEP-utilising enzyme, mobile domain XF_RS05335 PF03618 Kinase/pyrophosphorylase XF_RS05360 PF01341 Glycosyl hydrolases family 6 XF_RS05360 PF00553 Cellulose binding domain XF_RS05360 PF00041 Fibronectin type III domain XF_RS05365 PF04055 Radical SAM superfamily XF_RS05365 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family XF_RS05370 PF03099 Biotin/lipoate A/B protein ligase family XF_RS05375 PF04359 Protein of unknown function (DUF493) XF_RS05395 PF04286 Protein of unknown function (DUF445) XF_RS05400 PF00571 CBS domain XF_RS05400 PF03471 Transporter associated domain XF_RS05400 PF01595 Cyclin M transmembrane N-terminal domain XF_RS05420 PF00204 DNA gyrase B XF_RS05420 PF00986 DNA gyrase B subunit, carboxyl terminus XF_RS05420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS05420 PF01751 Toprim domain XF_RS05430 PF06418 CTP synthase N-terminus XF_RS05430 PF00117 Glutamine amidotransferase class-I XF_RS05435 PF00793 DAHP synthetase I family XF_RS05440 PF00113 Enolase, C-terminal TIM barrel domain XF_RS05440 PF03952 Enolase, N-terminal domain XF_RS05445 PF04977 Septum formation initiator XF_RS05450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XF_RS05455 PF02542 YgbB family XF_RS05460 PF01713 Smr domain XF_RS05485 PF03886 ABC-type transport auxiliary lipoprotein component XF_RS05485 PF02470 MlaD protein XF_RS05490 PF00005 ABC transporter XF_RS05495 PF02405 Permease MlaE XF_RS05520 PF04085 rod shape-determining protein MreC XF_RS05525 PF04093 rod shape-determining protein MreD XF_RS05530 PF00905 Penicillin binding protein transpeptidase domain XF_RS05530 PF03717 Penicillin-binding Protein dimerisation domain XF_RS05535 PF01098 Cell cycle protein XF_RS05540 PF02547 Queuosine biosynthesis protein XF_RS05545 PF02824 TGS domain XF_RS05545 PF04607 Region found in RelA / SpoT proteins XF_RS05545 PF13291 ACT domain XF_RS05560 PF03776 Septum formation topological specificity factor MinE XF_RS05565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XF_RS05570 PF03775 Septum formation inhibitor MinC, C-terminal domain XF_RS05570 PF05209 Septum formation inhibitor MinC, N-terminal domain XF_RS05590 PF00730 HhH-GPD superfamily base excision DNA repair protein XF_RS05600 PF01292 Prokaryotic cytochrome b561 XF_RS05605 PF04264 YceI-like domain XF_RS05610 PF01627 Hpt domain XF_RS05610 PF00512 His Kinase A (phospho-acceptor) domain XF_RS05610 PF00072 Response regulator receiver domain XF_RS05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS05615 PF01208 Uroporphyrinogen decarboxylase (URO-D) XF_RS05620 PF01761 3-dehydroquinate synthase XF_RS05625 PF01202 Shikimate kinase XF_RS05635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XF_RS05635 PF01243 Pyridoxamine 5'-phosphate oxidase XF_RS05640 PF00749 tRNA synthetases class I (E and Q), catalytic domain XF_RS05640 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XF_RS05650 PF03932 CutC family XF_RS05665 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS05675 PF00005 ABC transporter XF_RS05675 PF12857 TOBE-like domain XF_RS05685 PF04542 Sigma-70 region 2 XF_RS05685 PF03979 Sigma-70 factor, region 1.1 XF_RS05685 PF00140 Sigma-70 factor, region 1.2 XF_RS05685 PF04545 Sigma-70, region 4 XF_RS05685 PF04546 Sigma-70, non-essential region XF_RS05685 PF04539 Sigma-70 region 3 XF_RS05690 PF00521 DNA gyrase/topoisomerase IV, subunit A XF_RS05690 PF03989 DNA gyrase C-terminal domain, beta-propeller XF_RS05695 PF01047 MarR family XF_RS05705 PF12697 Alpha/beta hydrolase family XF_RS05710 PF00155 Aminotransferase class I and II XF_RS05720 PF01040 UbiA prenyltransferase family XF_RS05725 PF00753 Metallo-beta-lactamase superfamily XF_RS05730 PF12627 Probable RNA and SrmB- binding site of polymerase A XF_RS05730 PF01966 HD domain XF_RS05730 PF01743 Poly A polymerase head domain XF_RS05735 PF14718 Soluble lytic murein transglycosylase L domain XF_RS05735 PF01464 Transglycosylase SLT domain XF_RS05745 PF02666 Phosphatidylserine decarboxylase XF_RS05755 PF05175 Methyltransferase small domain XF_RS05760 PF01264 Chorismate synthase XF_RS05765 PF02774 Semialdehyde dehydrogenase, dimerisation domain XF_RS05765 PF01118 Semialdehyde dehydrogenase, NAD binding domain XF_RS05775 PF01416 tRNA pseudouridine synthase XF_RS05780 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XF_RS05785 PF00291 Pyridoxal-phosphate dependent enzyme XF_RS05790 PF00290 Tryptophan synthase alpha chain XF_RS05795 PF18073 Rubredoxin metal binding domain XF_RS05800 PF00296 Luciferase-like monooxygenase XF_RS05810 PF16124 RecQ zinc-binding XF_RS05810 PF00570 HRDC domain XF_RS05810 PF09382 RQC domain XF_RS05810 PF00271 Helicase conserved C-terminal domain XF_RS05810 PF00270 DEAD/DEAH box helicase XF_RS05815 PF00210 Ferritin-like domain XF_RS05820 PF00270 DEAD/DEAH box helicase XF_RS05820 PF04408 Helicase associated domain (HA2) XF_RS05820 PF00271 Helicase conserved C-terminal domain XF_RS05820 PF11898 Domain of unknown function (DUF3418) XF_RS05820 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XF_RS05835 PF02347 Glycine cleavage system P-protein XF_RS05840 PF03626 Prokaryotic Cytochrome C oxidase subunit IV XF_RS05845 PF00510 Cytochrome c oxidase subunit III XF_RS05850 PF00115 Cytochrome C and Quinol oxidase polypeptide I XF_RS05855 PF06481 COX Aromatic Rich Motif XF_RS05855 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XF_RS05860 PF00348 Polyprenyl synthetase XF_RS05865 PF00436 Single-strand binding protein family XF_RS05880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XF_RS05895 PF02896 PEP-utilising enzyme, TIM barrel domain XF_RS05895 PF05524 PEP-utilising enzyme, N-terminal XF_RS05895 PF00391 PEP-utilising enzyme, mobile domain XF_RS05900 PF00381 PTS HPr component phosphorylation site XF_RS05910 PF03668 P-loop ATPase protein family XF_RS05915 PF02603 HPr Serine kinase N terminus XF_RS05915 PF07475 HPr Serine kinase C-terminal domain XF_RS05920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XF_RS05925 PF04552 Sigma-54, DNA binding domain XF_RS05925 PF04963 Sigma-54 factor, core binding domain XF_RS05925 PF00309 Sigma-54 factor, Activator interacting domain (AID) XF_RS05930 PF00005 ABC transporter XF_RS05930 PF12399 Branched-chain amino acid ATP-binding cassette transporter XF_RS05950 PF01380 SIS domain XF_RS05950 PF00571 CBS domain XF_RS05955 PF01722 BolA-like protein XF_RS05960 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XF_RS05995 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal XF_RS05995 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain XF_RS05995 PF02769 AIR synthase related protein, C-terminal domain XF_RS06000 PF10411 Disulfide bond isomerase protein N-terminus XF_RS06000 PF13098 Thioredoxin-like domain XF_RS06005 PF00589 Phage integrase family XF_RS06005 PF02899 Phage integrase, N-terminal SAM-like domain XF_RS06010 PF00027 Cyclic nucleotide-binding domain XF_RS06010 PF00520 Ion transport protein XF_RS06015 PF00202 Aminotransferase class-III XF_RS06020 PF04107 Glutamate-cysteine ligase family 2(GCS2) XF_RS06025 PF01926 50S ribosome-binding GTPase XF_RS06045 PF01323 DSBA-like thioredoxin domain XF_RS06050 PF01323 DSBA-like thioredoxin domain XF_RS06060 PF04356 Protein of unknown function (DUF489) XF_RS06070 PF00293 NUDIX domain XF_RS06075 PF02617 ATP-dependent Clp protease adaptor protein ClpS XF_RS06080 PF02861 Clp amino terminal domain, pathogenicity island component XF_RS06080 PF10431 C-terminal, D2-small domain, of ClpB protein XF_RS06080 PF00004 ATPase family associated with various cellular activities (AAA) XF_RS06080 PF07724 AAA domain (Cdc48 subfamily) XF_RS06080 PF17871 AAA lid domain XF_RS06085 PF01176 Translation initiation factor 1A / IF-1 XF_RS06090 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XF_RS06100 PF07992 Pyridine nucleotide-disulphide oxidoreductase XF_RS06105 PF17854 FtsK alpha domain XF_RS06105 PF09397 Ftsk gamma domain XF_RS06105 PF01580 FtsK/SpoIIIE family XF_RS06105 PF13491 4TM region of DNA translocase FtsK/SpoIIIE XF_RS06115 PF03548 Outer membrane lipoprotein carrier protein LolA XF_RS06120 PF12002 MgsA AAA+ ATPase C terminal XF_RS06120 PF16193 AAA C-terminal domain XF_RS06120 PF00004 ATPase family associated with various cellular activities (AAA) XF_RS06125 PF02537 CrcB-like protein, Camphor Resistance (CrcB) XF_RS06130 PF00512 His Kinase A (phospho-acceptor) domain XF_RS06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS06135 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XF_RS06155 PF02685 Glucokinase XF_RS06165 PF07690 Major Facilitator Superfamily XF_RS06170 PF00356 Bacterial regulatory proteins, lacI family XF_RS06175 PF01380 SIS domain XF_RS06180 PF01979 Amidohydrolase family XF_RS06185 PF17848 Acetyl-coA carboxylase zinc finger domain XF_RS06185 PF01039 Carboxyl transferase domain XF_RS06190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XF_RS06190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XF_RS06190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XF_RS06190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XF_RS06195 PF01522 Polysaccharide deacetylase XF_RS06200 PF13439 Glycosyltransferase Family 4 XF_RS06200 PF00534 Glycosyl transferases group 1 XF_RS06205 PF00355 Rieske [2Fe-2S] domain XF_RS06210 PF00266 Aminotransferase class-V XF_RS06215 PF01458 Uncharacterized protein family (UPF0051) XF_RS06220 PF00005 ABC transporter XF_RS06225 PF01458 Uncharacterized protein family (UPF0051) XF_RS06230 PF02082 Transcriptional regulator XF_RS06240 PF00326 Prolyl oligopeptidase family XF_RS06240 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XF_RS06245 PF01678 Diaminopimelate epimerase XF_RS06255 PF00589 Phage integrase family XF_RS06255 PF02899 Phage integrase, N-terminal SAM-like domain XF_RS06260 PF00227 Proteasome subunit XF_RS06265 PF10431 C-terminal, D2-small domain, of ClpB protein XF_RS06265 PF00004 ATPase family associated with various cellular activities (AAA) XF_RS06265 PF07724 AAA domain (Cdc48 subfamily) XF_RS06275 PF01209 ubiE/COQ5 methyltransferase family XF_RS06280 PF01433 Peptidase family M1 domain XF_RS06280 PF11838 ERAP1-like C-terminal domain XF_RS06305 PF13369 Transglutaminase-like superfamily XF_RS06320 PF01507 Phosphoadenosine phosphosulfate reductase family XF_RS06325 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XF_RS06325 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XF_RS06330 PF00258 Flavodoxin XF_RS06330 PF00667 FAD binding domain XF_RS06330 PF00175 Oxidoreductase NAD-binding domain XF_RS06335 PF01507 Phosphoadenosine phosphosulfate reductase family XF_RS06340 PF00009 Elongation factor Tu GTP binding domain XF_RS06345 PF01192 RNA polymerase Rpb6 XF_RS06350 PF00625 Guanylate kinase XF_RS06355 PF08340 Domain of unknown function (DUF1732) XF_RS06355 PF03755 YicC-like family, N-terminal region XF_RS06360 PF01138 3' exoribonuclease family, domain 1 XF_RS06360 PF03725 3' exoribonuclease family, domain 2 XF_RS06365 PF01725 Ham1 family XF_RS06370 PF04055 Radical SAM superfamily XF_RS06370 PF06969 HemN C-terminal domain XF_RS06385 PF00561 alpha/beta hydrolase fold XF_RS06390 PF05175 Methyltransferase small domain XF_RS06390 PF17827 PrmC N-terminal domain XF_RS06405 PF05662 Coiled stalk of trimeric autotransporter adhesin XF_RS06405 PF05658 Head domain of trimeric autotransporter adhesin XF_RS06405 PF03895 YadA-like membrane anchor domain XF_RS06405 PF13018 Extended Signal Peptide of Type V secretion system XF_RS06410 PF00437 Type II/IV secretion system protein XF_RS06410 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XF_RS06415 PF00482 Type II secretion system (T2SS), protein F XF_RS06420 PF08334 Type II secretion system (T2SS), protein G XF_RS06425 PF12019 Type II transport protein GspH XF_RS06430 PF07963 Prokaryotic N-terminal methylation motif XF_RS06440 PF03934 Type II secretion system (T2SS), protein K XF_RS06445 PF05137 Fimbrial assembly protein (PilN) XF_RS06450 PF10741 Type II secretion system (T2SS), protein M subtype b XF_RS06460 PF00263 Bacterial type II and III secretion system protein XF_RS06460 PF03958 Bacterial type II/III secretion system short domain XF_RS06465 PF03895 YadA-like membrane anchor domain XF_RS06465 PF05658 Head domain of trimeric autotransporter adhesin XF_RS06465 PF05662 Coiled stalk of trimeric autotransporter adhesin XF_RS06470 PF10417 C-terminal domain of 1-Cys peroxiredoxin XF_RS06470 PF00578 AhpC/TSA family XF_RS06475 PF13192 Thioredoxin domain XF_RS06475 PF07992 Pyridine nucleotide-disulphide oxidoreductase XF_RS06480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XF_RS06480 PF03466 LysR substrate binding domain XF_RS06485 PF00814 Glycoprotease family XF_RS06490 PF01197 Ribosomal protein L31 XF_RS06495 PF00285 Citrate synthase, C-terminal domain XF_RS06500 PF00380 Ribosomal protein S9/S16 XF_RS06505 PF00572 Ribosomal protein L13 XF_RS06510 PF03232 Ubiquinone biosynthesis protein COQ7 XF_RS06515 PF02675 S-adenosylmethionine decarboxylase XF_RS06520 PF00325 Bacterial regulatory proteins, crp family XF_RS06520 PF00027 Cyclic nucleotide-binding domain XF_RS06530 PF00899 ThiF family XF_RS06540 PF07992 Pyridine nucleotide-disulphide oxidoreductase XF_RS06540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XF_RS06550 PF00364 Biotin-requiring enzyme XF_RS06550 PF02817 e3 binding domain XF_RS06550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XF_RS06555 PF16870 2-oxoglutarate dehydrogenase C-terminal XF_RS06555 PF00676 Dehydrogenase E1 component XF_RS06555 PF16078 2-oxoglutarate dehydrogenase N-terminus XF_RS06555 PF02779 Transketolase, pyrimidine binding domain XF_RS06560 PF08007 Cupin superfamily protein XF_RS06565 PF00206 Lyase XF_RS06565 PF08328 Adenylosuccinate lyase C-terminal XF_RS06575 PF00206 Lyase XF_RS06575 PF10415 Fumarase C C-terminus XF_RS06585 PF00436 Single-strand binding protein family XF_RS06625 PF00959 Phage lysozyme XF_RS06675 PF04233 Phage Mu protein F like protein XF_RS06730 PF10876 Phage tail assemb.y chaperone protein, TAC XF_RS06745 PF01850 PIN domain XF_RS06780 PF01381 Helix-turn-helix XF_RS06785 PF05973 Phage derived protein Gp49-like (DUF891) XF_RS06805 PF00005 ABC transporter XF_RS06810 PF00255 Glutathione peroxidase XF_RS06815 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XF_RS06815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XF_RS06820 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XF_RS06820 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XF_RS06820 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XF_RS06825 PF04102 SlyX XF_RS06835 PF07690 Major Facilitator Superfamily XF_RS06840 PF00294 pfkB family carbohydrate kinase XF_RS06850 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XF_RS06865 PF01209 ubiE/COQ5 methyltransferase family XF_RS06880 PF13632 Glycosyl transferase family group 2 XF_RS06885 PF02230 Phospholipase/Carboxylesterase XF_RS06890 PF07694 5TMR of 5TMR-LYT XF_RS06890 PF06580 Histidine kinase XF_RS06895 PF04397 LytTr DNA-binding domain XF_RS06895 PF00072 Response regulator receiver domain XF_RS06900 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XF_RS06900 PF03900 Porphobilinogen deaminase, C-terminal domain XF_RS06915 PF00437 Type II/IV secretion system protein XF_RS06920 PF00437 Type II/IV secretion system protein XF_RS06940 PF00535 Glycosyl transferase family 2 XF_RS06950 PF02801 Beta-ketoacyl synthase, C-terminal domain XF_RS06950 PF00109 Beta-ketoacyl synthase, N-terminal domain XF_RS06965 PF09924 Uncharacterised conserved protein (DUF2156) XF_RS06965 PF03706 Lysylphosphatidylglycerol synthase TM region XF_RS06970 PF02899 Phage integrase, N-terminal SAM-like domain XF_RS06970 PF00589 Phage integrase family XF_RS06975 PF00436 Single-strand binding protein family XF_RS07000 PF10065 Uncharacterized conserved protein (DUF2303) XF_RS07035 PF18495 Antitoxin VbhA XF_RS07040 PF17841 BID domain of Bartonella effector protein (Bep) XF_RS07040 PF02661 Fic/DOC family XF_RS07115 PF00959 Phage lysozyme XF_RS07165 PF04233 Phage Mu protein F like protein XF_RS07220 PF10876 Phage tail assemb.y chaperone protein, TAC XF_RS07270 PF01381 Helix-turn-helix XF_RS07275 PF05973 Phage derived protein Gp49-like (DUF891) XF_RS07300 PF01381 Helix-turn-helix XF_RS07315 PF01042 Endoribonuclease L-PSP XF_RS07335 PF00912 Transglycosylase XF_RS07340 PF05192 MutS domain III XF_RS07340 PF01624 MutS domain I XF_RS07340 PF05190 MutS family domain IV XF_RS07340 PF00488 MutS domain V XF_RS07340 PF05188 MutS domain II XF_RS07345 PF01168 Alanine racemase, N-terminal domain XF_RS07355 PF13356 Arm DNA-binding domain XF_RS07355 PF14659 Phage integrase, N-terminal SAM-like domain XF_RS07355 PF00589 Phage integrase family XF_RS07365 PF01381 Helix-turn-helix XF_RS07375 PF00248 Aldo/keto reductase family XF_RS07380 PF00248 Aldo/keto reductase family XF_RS07385 PF01361 Tautomerase enzyme XF_RS07395 PF00107 Zinc-binding dehydrogenase XF_RS07395 PF08240 Alcohol dehydrogenase GroES-like domain XF_RS07400 PF07690 Major Facilitator Superfamily XF_RS07405 PF00248 Aldo/keto reductase family XF_RS07410 PF03466 LysR substrate binding domain XF_RS07410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XF_RS07415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XF_RS07420 PF03358 NADPH-dependent FMN reductase XF_RS07425 PF00107 Zinc-binding dehydrogenase XF_RS07425 PF08240 Alcohol dehydrogenase GroES-like domain XF_RS07430 PF07995 Glucose / Sorbosone dehydrogenase XF_RS07450 PF12706 Beta-lactamase superfamily domain XF_RS07455 PF07995 Glucose / Sorbosone dehydrogenase XF_RS07460 PF00106 short chain dehydrogenase XF_RS07465 PF08450 SMP-30/Gluconolactonase/LRE-like region XF_RS07470 PF07859 alpha/beta hydrolase fold XF_RS07475 PF00106 short chain dehydrogenase XF_RS07480 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XF_RS07485 PF00107 Zinc-binding dehydrogenase XF_RS07485 PF08240 Alcohol dehydrogenase GroES-like domain XF_RS07490 PF16653 Saccharopine dehydrogenase C-terminal domain XF_RS07490 PF03435 Saccharopine dehydrogenase NADP binding domain XF_RS07500 PF07690 Major Facilitator Superfamily XF_RS07505 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XF_RS07515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XF_RS07515 PF03466 LysR substrate binding domain XF_RS07585 PF07690 Major Facilitator Superfamily XF_RS07605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XF_RS07605 PF03466 LysR substrate binding domain XF_RS07640 PF01381 Helix-turn-helix XF_RS07640 PF00145 C-5 cytosine-specific DNA methylase XF_RS07650 PF00145 C-5 cytosine-specific DNA methylase XF_RS07660 PF00436 Single-strand binding protein family XF_RS07700 PF13614 AAA domain XF_RS07745 PF03309 Type III pantothenate kinase XF_RS07750 PF02237 Biotin protein ligase C terminal domain XF_RS07750 PF03099 Biotin/lipoate A/B protein ligase family XF_RS07750 PF08279 HTH domain XF_RS07775 PF00581 Rhodanese-like domain XF_RS07780 PF02556 Preprotein translocase subunit SecB XF_RS07785 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XF_RS07785 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XF_RS07795 PF02086 D12 class N6 adenine-specific DNA methyltransferase XF_RS07810 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding XF_RS07810 PF12169 DNA polymerase III subunits gamma and tau domain III XF_RS07810 PF12170 DNA polymerase III tau subunit V interacting with alpha XF_RS07815 PF02575 YbaB/EbfC DNA-binding family XF_RS07820 PF02132 RecR protein XF_RS07820 PF13662 Toprim domain XF_RS07825 PF01230 HIT domain XF_RS07835 PF13559 Domain of unknown function (DUF4129) XF_RS07835 PF01841 Transglutaminase-like superfamily XF_RS07835 PF11992 Domain of unknown function (DUF3488) XF_RS07845 PF07726 ATPase family associated with various cellular activities (AAA) XF_RS07845 PF17863 AAA lid domain XF_RS07855 PF02620 Large ribosomal RNA subunit accumulation protein YceD XF_RS07860 PF01783 Ribosomal L32p protein family XF_RS07865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XF_RS07865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XF_RS07870 PF00682 HMGL-like XF_RS07870 PF08502 LeuA allosteric (dimerisation) domain XF_RS07875 PF00291 Pyridoxal-phosphate dependent enzyme XF_RS07885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XF_RS07885 PF00205 Thiamine pyrophosphate enzyme, central domain XF_RS07885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XF_RS07890 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XF_RS07890 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain XF_RS07895 PF11818 C-terminal domain of tail specific protease (DUF3340) XF_RS07895 PF17804 Tail specific protease N-terminal domain XF_RS07895 PF03572 Peptidase family S41 XF_RS07895 PF00595 PDZ domain XF_RS07900 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XF_RS07905 PF02566 OsmC-like protein XF_RS07910 PF03969 AFG1-like ATPase XF_RS07920 PF02492 CobW/HypB/UreG, nucleotide-binding domain XF_RS07920 PF07683 Cobalamin synthesis protein cobW C-terminal domain XF_RS07925 PF00551 Formyl transferase XF_RS07935 PF03109 ABC1 family XF_RS07945 PF12241 Trans-2-enoyl-CoA reductase catalytic region XF_RS07945 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XF_RS07945 PF07055 Enoyl reductase FAD binding domain XF_RS07965 PF04264 YceI-like domain XF_RS07970 PF02673 Bacitracin resistance protein BacA XF_RS07975 PF03951 Glutamine synthetase, beta-Grasp domain XF_RS07975 PF00120 Glutamine synthetase, catalytic domain XF_RS07980 PF00543 Nitrogen regulatory protein P-II XF_RS07985 PF00909 Ammonium Transporter Family XF_RS07990 PF01751 Toprim domain XF_RS07990 PF01131 DNA topoisomerase XF_RS07995 PF02954 Bacterial regulatory protein, Fis family XF_RS07995 PF00072 Response regulator receiver domain XF_RS07995 PF00158 Sigma-54 interaction domain XF_RS08000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS08000 PF00512 His Kinase A (phospho-acceptor) domain XF_RS08000 PF00989 PAS fold XF_RS08005 PF12323 Helix-turn-helix domain XF_RS08005 PF07282 Putative transposase DNA-binding domain XF_RS08005 PF01385 Probable transposase XF_RS08015 PF00082 Subtilase family XF_RS08015 PF03797 Autotransporter beta-domain XF_RS08015 PF12951 Passenger-associated-transport-repeat XF_RS08025 PF05681 Fumarate hydratase (Fumerase) XF_RS08025 PF05683 Fumarase C-terminus XF_RS08030 PF01336 OB-fold nucleic acid binding domain XF_RS08030 PF02938 GAD domain XF_RS08030 PF00152 tRNA synthetases class II (D, K and N) XF_RS08035 PF06508 Queuosine biosynthesis protein QueC XF_RS08055 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system XF_RS08155 PF00300 Histidine phosphatase superfamily (branch 1) XF_RS08160 PF10459 Peptidase S46 XF_RS08165 PF13667 ThiC-associated domain XF_RS08165 PF01964 Radical SAM ThiC family XF_RS08170 PF00175 Oxidoreductase NAD-binding domain XF_RS08170 PF00970 Oxidoreductase FAD-binding domain XF_RS08175 PF00255 Glutathione peroxidase XF_RS08180 PF00854 POT family XF_RS08185 PF04493 Endonuclease V XF_RS08190 PF00300 Histidine phosphatase superfamily (branch 1) XF_RS08195 PF04055 Radical SAM superfamily XF_RS08205 PF00691 OmpA family XF_RS08210 PF07676 WD40-like Beta Propeller Repeat XF_RS08210 PF04052 TolB amino-terminal domain XF_RS08220 PF02472 Biopolymer transport protein ExbD/TolR XF_RS08225 PF01618 MotA/TolQ/ExbB proton channel family XF_RS08230 PF03061 Thioesterase superfamily XF_RS08235 PF05496 Holliday junction DNA helicase RuvB P-loop domain XF_RS08235 PF05491 RuvB C-terminal winged helix domain XF_RS08235 PF17864 RuvB AAA lid domain XF_RS08240 PF02705 K+ potassium transporter XF_RS08245 PF07499 RuvA, C-terminal domain XF_RS08245 PF01330 RuvA N terminal domain XF_RS08250 PF02075 Crossover junction endodeoxyribonuclease RuvC XF_RS08255 PF01709 Transcriptional regulator XF_RS08260 PF04362 Bacterial Fe(2+) trafficking XF_RS08265 PF14815 NUDIX domain XF_RS08265 PF00730 HhH-GPD superfamily base excision DNA repair protein XF_RS08265 PF00633 Helix-hairpin-helix motif XF_RS08270 PF00448 SRP54-type protein, GTPase domain XF_RS08270 PF02881 SRP54-type protein, helical bundle domain XF_RS08285 PF01026 TatD related DNase XF_RS08290 PF04715 Anthranilate synthase component I, N terminal region XF_RS08290 PF00425 chorismate binding enzyme XF_RS08295 PF04715 Anthranilate synthase component I, N terminal region XF_RS08295 PF00425 chorismate binding enzyme XF_RS08320 PF01371 Trp repressor protein XF_RS08325 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XF_RS08325 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XF_RS08335 PF02445 Quinolinate synthetase A protein XF_RS08340 PF00890 FAD binding domain XF_RS08340 PF02910 Fumarate reductase flavoprotein C-term XF_RS08345 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XF_RS08345 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XF_RS08385 PF01648 4'-phosphopantetheinyl transferase superfamily XF_RS08390 PF02527 rRNA small subunit methyltransferase G XF_RS08395 PF00456 Transketolase, thiamine diphosphate binding domain XF_RS08395 PF02780 Transketolase, C-terminal domain XF_RS08395 PF02779 Transketolase, pyrimidine binding domain XF_RS08400 PF00375 Sodium:dicarboxylate symporter family XF_RS08405 PF01625 Peptide methionine sulfoxide reductase XF_RS08425 PF01432 Peptidase family M3 XF_RS08435 PF08245 Mur ligase middle domain XF_RS08435 PF02875 Mur ligase family, glutamate ligase domain XF_RS08450 PF00156 Phosphoribosyl transferase domain XF_RS08465 PF01627 Hpt domain XF_RS08465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS08465 PF02895 Signal transducing histidine kinase, homodimeric domain XF_RS08465 PF00072 Response regulator receiver domain XF_RS08465 PF01584 CheW-like domain XF_RS08470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XF_RS08470 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term XF_RS08475 PF01584 CheW-like domain XF_RS08480 PF00072 Response regulator receiver domain XF_RS08485 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XF_RS08485 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XF_RS08500 PF02092 Glycyl-tRNA synthetase beta subunit XF_RS08500 PF05746 DALR anticodon binding domain XF_RS08505 PF02091 Glycyl-tRNA synthetase alpha subunit XF_RS08510 PF00795 Carbon-nitrogen hydrolase XF_RS08510 PF02540 NAD synthase XF_RS08520 PF03692 Putative zinc- or iron-chelating domain XF_RS08525 PF00561 alpha/beta hydrolase fold XF_RS08535 PF18273 Type III R-M EcoP15I C-terminal domain XF_RS08535 PF01555 DNA methylase XF_RS08540 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XF_RS08540 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XF_RS08550 PF00588 SpoU rRNA Methylase family XF_RS08560 PF01808 AICARFT/IMPCHase bienzyme XF_RS08560 PF02142 MGS-like domain XF_RS08565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XF_RS08565 PF02843 Phosphoribosylglycinamide synthetase, C domain XF_RS08565 PF02844 Phosphoribosylglycinamide synthetase, N domain XF_RS08575 PF12805 FUSC-like inner membrane protein yccS XF_RS08580 PF03186 CobD/Cbib protein XF_RS08585 PF05662 Coiled stalk of trimeric autotransporter adhesin XF_RS08585 PF05658 Head domain of trimeric autotransporter adhesin XF_RS08585 PF03895 YadA-like membrane anchor domain XF_RS08590 PF01227 GTP cyclohydrolase I XF_RS08595 PF00132 Bacterial transferase hexapeptide (six repeats) XF_RS08600 PF08032 RNA 2'-O ribose methyltransferase substrate binding XF_RS08600 PF00588 SpoU rRNA Methylase family XF_RS08620 PF08534 Redoxin XF_RS08625 PF00925 GTP cyclohydrolase II XF_RS08635 PF00535 Glycosyl transferase family 2 XF_RS08645 PF01381 Helix-turn-helix XF_RS08655 PF01063 Amino-transferase class IV XF_RS08690 PF00293 NUDIX domain XF_RS08695 PF00557 Metallopeptidase family M24 XF_RS08695 PF05195 Aminopeptidase P, N-terminal domain XF_RS08700 PF03695 Uncharacterised protein family (UPF0149) XF_RS08710 PF05164 Cell division protein ZapA XF_RS08715 PF01812 5-formyltetrahydrofolate cyclo-ligase family XF_RS08725 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XF_RS08735 PF00999 Sodium/hydrogen exchanger family XF_RS08750 PF00929 Exonuclease XF_RS08750 PF08411 Exonuclease C-terminal XF_RS08760 PF12706 Beta-lactamase superfamily domain XF_RS08765 PF08401 Domain of unknown function (DUF1738) XF_RS08765 PF13362 Toprim domain XF_RS08765 PF18818 Metallopeptidase superfamily domain XF_RS08775 PF00239 Resolvase, N terminal domain XF_RS08775 PF02796 Helix-turn-helix domain of resolvase XF_RS08795 PF09386 Antitoxin ParD XF_RS08800 PF05016 ParE toxin of type II toxin-antitoxin system, parDE XF_RS08890 PF03743 Bacterial conjugation TrbI-like protein XF_RS08900 PF03524 Conjugal transfer protein XF_RS08920 PF04956 TrbC/VIRB2 family XF_RS08925 PF00437 Type II/IV secretion system protein XF_RS08930 PF10502 Signal peptidase, peptidase S26 XF_RS08935 PF01751 Toprim domain XF_RS08935 PF01131 DNA topoisomerase XF_RS08945 PF13362 Toprim domain XF_RS08945 PF18818 Metallopeptidase superfamily domain XF_RS08945 PF08401 Domain of unknown function (DUF1738) XF_RS09005 PF00171 Aldehyde dehydrogenase family XF_RS09005 PF14850 DNA-binding domain of Proline dehydrogenase XF_RS09005 PF18327 Proline utilization A proline dehydrogenase N-terminal domain XF_RS09005 PF01619 Proline dehydrogenase XF_RS09035 PF04221 RelB antitoxin XF_RS09045 PF00873 AcrB/AcrD/AcrF family XF_RS09055 PF00440 Bacterial regulatory proteins, tetR family XF_RS09075 PF01513 ATP-NAD kinase XF_RS09080 PF05088 Bacterial NAD-glutamate dehydrogenase XF_RS09090 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XF_RS09090 PF00529 HlyD membrane-fusion protein of T1SS XF_RS09095 PF00873 AcrB/AcrD/AcrF family XF_RS09100 PF00132 Bacterial transferase hexapeptide (six repeats) XF_RS09105 PF02649 Type I GTP cyclohydrolase folE2 XF_RS09110 PF13649 Methyltransferase domain XF_RS09125 PF01134 Glucose inhibited division protein A XF_RS09125 PF13932 GidA associated domain XF_RS09215 PF08278 DNA primase DnaG DnaB-binding XF_RS09215 PF01807 CHC2 zinc finger XF_RS09215 PF08275 DNA primase catalytic core, N-terminal domain XF_RS09215 PF10410 DnaB-helicase binding domain of primase XF_RS09250 PF12848 ABC transporter XF_RS09250 PF00005 ABC transporter XF_RS09255 PF07715 TonB-dependent Receptor Plug Domain XF_RS09255 PF00593 TonB dependent receptor XF_RS09260 PF01323 DSBA-like thioredoxin domain XF_RS09265 PF07715 TonB-dependent Receptor Plug Domain XF_RS09265 PF00593 TonB dependent receptor XF_RS09275 PF00999 Sodium/hydrogen exchanger family XF_RS09275 PF02254 TrkA-N domain XF_RS09280 PF12849 PBP superfamily domain XF_RS09285 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS09290 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS09295 PF00005 ABC transporter XF_RS09300 PF01895 PhoU domain XF_RS09305 PF00929 Exonuclease XF_RS09310 PF00398 Ribosomal RNA adenine dimethylase XF_RS09315 PF04379 ApaG domain XF_RS09320 PF00149 Calcineurin-like phosphoesterase XF_RS09335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XF_RS09355 PF00929 Exonuclease XF_RS09360 PF00075 RNase H XF_RS09370 PF00753 Metallo-beta-lactamase superfamily XF_RS09370 PF16123 Hydroxyacylglutathione hydrolase C-terminus XF_RS09375 PF00575 S1 RNA binding domain XF_RS09375 PF09371 Tex-like protein N-terminal domain XF_RS09375 PF16921 Tex protein YqgF-like domain XF_RS09375 PF17674 HHH domain XF_RS09390 PF00719 Inorganic pyrophosphatase XF_RS09395 PF00085 Thioredoxin XF_RS09405 PF13603 Leucyl-tRNA synthetase, Domain 2 XF_RS09405 PF00133 tRNA synthetases class I (I, L, M and V) XF_RS09405 PF08264 Anticodon-binding domain of tRNA XF_RS09420 PF01467 Cytidylyltransferase-like XF_RS09445 PF13406 Transglycosylase SLT domain XF_RS09450 PF03330 Lytic transglycolase XF_RS09450 PF05036 Sporulation related domain XF_RS09585 PF09285 Elongation factor P, C-terminal XF_RS09585 PF01132 Elongation factor P (EF-P) OB domain XF_RS09585 PF08207 Elongation factor P (EF-P) KOW-like domain XF_RS09590 PF02913 FAD linked oxidases, C-terminal domain XF_RS09590 PF01565 FAD binding domain XF_RS09595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XF_RS09595 PF01842 ACT domain XF_RS09595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XF_RS09600 PF13520 Amino acid permease XF_RS09605 PF13520 Amino acid permease XF_RS09610 PF00596 Class II Aldolase and Adducin N-terminal domain XF_RS09615 PF03079 ARD/ARD' family XF_RS09625 PF01502 Phosphoribosyl-AMP cyclohydrolase XF_RS09625 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XF_RS09630 PF00977 Histidine biosynthesis protein XF_RS09635 PF00977 Histidine biosynthesis protein XF_RS09640 PF00117 Glutamine amidotransferase class-I XF_RS09645 PF00475 Imidazoleglycerol-phosphate dehydratase XF_RS09650 PF00155 Aminotransferase class I and II XF_RS09655 PF00815 Histidinol dehydrogenase XF_RS09660 PF08029 HisG, C-terminal domain XF_RS09660 PF01634 ATP phosphoribosyltransferase XF_RS09670 PF03129 Anticodon binding domain XF_RS09670 PF13393 Histidyl-tRNA synthetase XF_RS09675 PF14821 Threonine synthase N terminus XF_RS09675 PF00291 Pyridoxal-phosphate dependent enzyme XF_RS09680 PF08544 GHMP kinases C terminal XF_RS09680 PF00288 GHMP kinases N terminal domain XF_RS09685 PF13840 ACT domain XF_RS09685 PF00696 Amino acid kinase family XF_RS09685 PF03447 Homoserine dehydrogenase, NAD binding domain XF_RS09685 PF00742 Homoserine dehydrogenase XF_RS09685 PF01842 ACT domain XF_RS09690 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XF_RS09690 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XF_RS09695 PF03652 Holliday junction resolvase XF_RS09700 PF02622 Uncharacterized ACR, COG1678 XF_RS09705 PF07943 Penicillin-binding protein 5, C-terminal domain XF_RS09705 PF00768 D-alanyl-D-alanine carboxypeptidase XF_RS09715 PF00141 Peroxidase XF_RS09720 PF00226 DnaJ domain XF_RS09720 PF01556 DnaJ C terminal domain XF_RS09730 PF00912 Transglycosylase XF_RS09730 PF00905 Penicillin binding protein transpeptidase domain XF_RS09730 PF06832 Penicillin-Binding Protein C-terminus Family XF_RS09735 PF00593 TonB dependent receptor XF_RS09735 PF07715 TonB-dependent Receptor Plug Domain XF_RS09745 PF08281 Sigma-70, region 4 XF_RS09745 PF04542 Sigma-70 region 2 XF_RS09755 PF13180 PDZ domain XF_RS09760 PF00009 Elongation factor Tu GTP binding domain XF_RS09760 PF00679 Elongation factor G C-terminus XF_RS09760 PF06421 GTP-binding protein LepA C-terminus XF_RS09760 PF03144 Elongation factor Tu domain 2 XF_RS09765 PF10502 Signal peptidase, peptidase S26 XF_RS09775 PF14622 Ribonuclease-III-like XF_RS09775 PF00035 Double-stranded RNA binding motif XF_RS09780 PF01926 50S ribosome-binding GTPase XF_RS09780 PF07650 KH domain XF_RS09785 PF11967 Recombination protein O N terminal XF_RS09785 PF02565 Recombination protein O C terminal XF_RS09790 PF02780 Transketolase, C-terminal domain XF_RS09790 PF02779 Transketolase, pyrimidine binding domain XF_RS09790 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XF_RS09795 PF00474 Sodium:solute symporter family XF_RS09805 PF16177 Acetyl-coenzyme A synthetase N-terminus XF_RS09805 PF00501 AMP-binding enzyme XF_RS09805 PF13193 AMP-binding enzyme C-terminal domain XF_RS09810 PF02659 Putative manganese efflux pump XF_RS09820 PF13360 PQQ-like domain XF_RS09825 PF00326 Prolyl oligopeptidase family XF_RS09825 PF07676 WD40-like Beta Propeller Repeat XF_RS09825 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XF_RS09830 PF03169 OPT oligopeptide transporter protein XF_RS09840 PF01266 FAD dependent oxidoreductase XF_RS09840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase XF_RS09845 PF00230 Major intrinsic protein XF_RS09850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XF_RS09850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XF_RS09860 PF01263 Aldose 1-epimerase XF_RS09865 PF01717 Cobalamin-independent synthase, Catalytic domain XF_RS09865 PF08267 Cobalamin-independent synthase, N-terminal domain XF_RS09870 PF02677 Epoxyqueuosine reductase QueH XF_RS09880 PF00501 AMP-binding enzyme XF_RS09890 PF00535 Glycosyl transferase family 2 XF_RS09895 PF01370 NAD dependent epimerase/dehydratase family XF_RS09900 PF02195 ParB-like nuclease domain XF_RS09900 PF17762 HTH domain found in ParB protein XF_RS09905 PF13614 AAA domain XF_RS09915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XF_RS09915 PF02403 Seryl-tRNA synthetase N-terminal domain XF_RS09920 PF03544 Gram-negative bacterial TonB protein C-terminal XF_RS09965 PF01451 Low molecular weight phosphotyrosine protein phosphatase XF_RS09970 PF02348 Cytidylyltransferase XF_RS09975 PF10609 NUBPL iron-transfer P-loop NTPase XF_RS09980 PF00202 Aminotransferase class-III XF_RS09995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XF_RS10000 PF00490 Delta-aminolevulinic acid dehydratase XF_RS10020 PF01066 CDP-alcohol phosphatidyltransferase XF_RS10025 PF08459 UvrC Helix-hairpin-helix N-terminal XF_RS10025 PF02151 UvrB/uvrC motif XF_RS10025 PF01541 GIY-YIG catalytic domain XF_RS10035 PF01555 DNA methylase XF_RS10040 PF00959 Phage lysozyme XF_RS10080 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XF_RS10085 PF01842 ACT domain XF_RS10085 PF00800 Prephenate dehydratase XF_RS10085 PF01817 Chorismate mutase type II XF_RS10090 PF00266 Aminotransferase class-V XF_RS10100 PF12679 ABC-2 family transporter protein XF_RS10105 PF00005 ABC transporter XF_RS10115 PF00186 Dihydrofolate reductase XF_RS10120 PF00303 Thymidylate synthase XF_RS10125 PF01790 Prolipoprotein diacylglyceryl transferase XF_RS10130 PF01219 Prokaryotic diacylglycerol kinase XF_RS10135 PF00072 Response regulator receiver domain XF_RS10135 PF00486 Transcriptional regulatory protein, C terminal XF_RS10140 PF01817 Chorismate mutase type II XF_RS10140 PF02153 Prephenate dehydrogenase XF_RS10145 PF00226 DnaJ domain XF_RS10145 PF00684 DnaJ central domain XF_RS10145 PF01556 DnaJ C terminal domain XF_RS10150 PF00012 Hsp70 protein XF_RS10155 PF01025 GrpE XF_RS10160 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XF_RS10160 PF01628 HrcA protein C terminal domain XF_RS10165 PF02463 RecF/RecN/SMC N terminal domain XF_RS10170 PF01475 Ferric uptake regulator family XF_RS10175 PF04355 SmpA / OmlA family XF_RS10180 PF03658 RnfH family Ubiquitin XF_RS10190 PF01668 SmpB protein XF_RS10205 PF01048 Phosphorylase superfamily XF_RS10210 PF00156 Phosphoribosyl transferase domain XF_RS10215 PF00933 Glycosyl hydrolase family 3 N terminal domain XF_RS10220 PF01928 CYTH domain XF_RS10225 PF05958 tRNA (Uracil-5-)-methyltransferase XF_RS10230 PF00072 Response regulator receiver domain XF_RS10230 PF00486 Transcriptional regulatory protein, C terminal XF_RS10235 PF03808 Glycosyl transferase WecB/TagA/CpsF family XF_RS10245 PF14667 Polysaccharide biosynthesis C-terminal domain XF_RS10255 PF00534 Glycosyl transferases group 1 XF_RS10255 PF13439 Glycosyltransferase Family 4 XF_RS10270 PF02397 Bacterial sugar transferase XF_RS10285 PF00180 Isocitrate/isopropylmalate dehydrogenase XF_RS10290 PF00694 Aconitase C-terminal domain XF_RS10295 PF00330 Aconitase family (aconitate hydratase) XF_RS10310 PF14489 QueF-like protein XF_RS10310 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XF_RS10315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion XF_RS10320 PF00873 AcrB/AcrD/AcrF family XF_RS10325 PF00873 AcrB/AcrD/AcrF family XF_RS10335 PF08240 Alcohol dehydrogenase GroES-like domain XF_RS10335 PF00107 Zinc-binding dehydrogenase XF_RS10350 PF00462 Glutaredoxin XF_RS10355 PF01522 Polysaccharide deacetylase XF_RS10360 PF00155 Aminotransferase class I and II XF_RS10365 PF03412 Peptidase C39 family XF_RS10365 PF00005 ABC transporter XF_RS10365 PF00664 ABC transporter transmembrane region XF_RS10420 PF13091 PLD-like domain XF_RS10420 PF13087 AAA domain XF_RS10445 PF02401 LytB protein XF_RS10450 PF01252 Signal peptidase (SPase) II XF_RS10455 PF00133 tRNA synthetases class I (I, L, M and V) XF_RS10455 PF08264 Anticodon-binding domain of tRNA XF_RS10455 PF06827 Zinc finger found in FPG and IleRS XF_RS10460 PF06574 FAD synthetase XF_RS10460 PF01687 Riboflavin kinase XF_RS10465 PF03023 Lipid II flippase MurJ XF_RS10470 PF01649 Ribosomal protein S20 XF_RS10475 PF01926 50S ribosome-binding GTPase XF_RS10475 PF01018 GTP1/OBG XF_RS10480 PF01016 Ribosomal L27 protein XF_RS10485 PF00829 Ribosomal prokaryotic L21 protein XF_RS10490 PF17760 UvrA interaction domain XF_RS10490 PF00005 ABC transporter XF_RS10490 PF17755 UvrA DNA-binding domain XF_RS10505 PF02540 NAD synthase XF_RS10505 PF00958 GMP synthase C terminal domain XF_RS10505 PF00117 Glutamine amidotransferase class-I XF_RS10510 PF00478 IMP dehydrogenase / GMP reductase domain XF_RS10510 PF00571 CBS domain XF_RS10515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XF_RS10515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XF_RS10520 PF00483 Nucleotidyl transferase XF_RS10525 PF02719 Polysaccharide biosynthesis protein XF_RS10530 PF00953 Glycosyl transferase family 4 XF_RS10535 PF18073 Rubredoxin metal binding domain XF_RS10545 PF00216 Bacterial DNA-binding protein XF_RS10550 PF00575 S1 RNA binding domain XF_RS10555 PF02224 Cytidylate kinase XF_RS10565 PF04371 Porphyromonas-type peptidyl-arginine deiminase XF_RS10570 PF00795 Carbon-nitrogen hydrolase XF_RS10585 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS10590 PF00528 Binding-protein-dependent transport system inner membrane component XF_RS10610 PF02616 Segregation and condensation protein ScpA XF_RS10615 PF04079 Segregation and condensation complex subunit ScpB XF_RS10620 PF00849 RNA pseudouridylate synthase XF_RS10620 PF01479 S4 domain XF_RS10630 PF00005 ABC transporter XF_RS10635 PF03379 CcmB protein XF_RS10640 PF01578 Cytochrome C assembly protein XF_RS10645 PF03100 CcmE XF_RS10650 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal XF_RS10650 PF01578 Cytochrome C assembly protein XF_RS10655 PF08534 Redoxin XF_RS10660 PF03918 Cytochrome C biogenesis protein XF_RS10675 PF00561 alpha/beta hydrolase fold XF_RS10690 PF13419 Haloacid dehalogenase-like hydrolase XF_RS10700 PF01979 Amidohydrolase family XF_RS10705 PF09285 Elongation factor P, C-terminal XF_RS10705 PF08207 Elongation factor P (EF-P) KOW-like domain XF_RS10705 PF01132 Elongation factor P (EF-P) OB domain XF_RS10710 PF04055 Radical SAM superfamily XF_RS10715 PF00588 SpoU rRNA Methylase family XF_RS10720 PF00459 Inositol monophosphatase family XF_RS10765 PF17482 Phage tail sheath C-terminal domain XF_RS10765 PF04984 Phage tail sheath protein subtilisin-like domain XF_RS10790 PF15723 Motility quorum-sensing regulator, toxin of MqsA XF_RS10795 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA XF_RS10865 PF00959 Phage lysozyme XF_RS11015 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain XF_RS11015 PF00589 Phage integrase family XF_RS11030 PF00072 Response regulator receiver domain XF_RS11030 PF00486 Transcriptional regulatory protein, C terminal XF_RS11035 PF00672 HAMP domain XF_RS11035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS11035 PF00512 His Kinase A (phospho-acceptor) domain XF_RS11040 PF01121 Dephospho-CoA kinase XF_RS11045 PF06750 Bacterial Peptidase A24 N-terminal domain XF_RS11045 PF01478 Type IV leader peptidase family XF_RS11050 PF00482 Type II secretion system (T2SS), protein F XF_RS11055 PF07963 Prokaryotic N-terminal methylation motif XF_RS11055 PF00114 Pilin (bacterial filament) XF_RS11065 PF00114 Pilin (bacterial filament) XF_RS11065 PF07963 Prokaryotic N-terminal methylation motif XF_RS11075 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XF_RS11075 PF00437 Type II/IV secretion system protein XF_RS11080 PF00158 Sigma-54 interaction domain XF_RS11080 PF02954 Bacterial regulatory protein, Fis family XF_RS11080 PF00072 Response regulator receiver domain XF_RS11085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS11085 PF00512 His Kinase A (phospho-acceptor) domain XF_RS11090 PF00549 CoA-ligase XF_RS11090 PF08442 ATP-grasp domain XF_RS11095 PF00549 CoA-ligase XF_RS11095 PF02629 CoA binding domain XF_RS11105 PF08479 POTRA domain, ShlB-type XF_RS11105 PF17287 POTRA domain XF_RS11105 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XF_RS11115 PF00521 DNA gyrase/topoisomerase IV, subunit A XF_RS11115 PF03989 DNA gyrase C-terminal domain, beta-propeller XF_RS11120 PF01008 Initiation factor 2 subunit family XF_RS11130 PF00152 tRNA synthetases class II (D, K and N) XF_RS11140 PF03120 NAD-dependent DNA ligase OB-fold domain XF_RS11140 PF01653 NAD-dependent DNA ligase adenylation domain XF_RS11140 PF12826 Helix-hairpin-helix motif XF_RS11140 PF00533 BRCA1 C Terminus (BRCT) domain XF_RS11140 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XF_RS11145 PF04354 ZipA, C-terminal FtsZ-binding domain XF_RS11150 PF02463 RecF/RecN/SMC N terminal domain XF_RS11155 PF03948 Ribosomal protein L9, C-terminal domain XF_RS11155 PF01281 Ribosomal protein L9, N-terminal domain XF_RS11160 PF01084 Ribosomal protein S18 XF_RS11165 PF01250 Ribosomal protein S6 XF_RS11170 PF01521 Iron-sulphur cluster biosynthesis XF_RS11175 PF01336 OB-fold nucleic acid binding domain XF_RS11175 PF00152 tRNA synthetases class II (D, K and N) XF_RS11180 PF01061 ABC-2 type transporter XF_RS11185 PF00005 ABC transporter XF_RS11200 PF01180 Dihydroorotate dehydrogenase XF_RS11205 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XF_RS11205 PF01565 FAD binding domain XF_RS11210 PF00892 EamA-like transporter family XF_RS11220 PF04551 GcpE protein XF_RS11235 PF00072 Response regulator receiver domain XF_RS11240 PF00889 Elongation factor TS XF_RS11245 PF00318 Ribosomal protein S2 XF_RS11255 PF00005 ABC transporter XF_RS11255 PF00664 ABC transporter transmembrane region XF_RS11265 PF02321 Outer membrane efflux protein XF_RS11270 PF12850 Calcineurin-like phosphoesterase superfamily domain XF_RS11275 PF02541 Ppx/GppA phosphatase family XF_RS11280 PF02503 Polyphosphate kinase middle domain XF_RS11280 PF13090 Polyphosphate kinase C-terminal domain 2 XF_RS11280 PF17941 Polyphosphate kinase C-terminal domain 1 XF_RS11280 PF13089 Polyphosphate kinase N-terminal domain XF_RS11285 PF11808 Phosphate regulon sensor protein PhoR XF_RS11285 PF00512 His Kinase A (phospho-acceptor) domain XF_RS11285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XF_RS11285 PF00989 PAS fold XF_RS11290 PF00072 Response regulator receiver domain XF_RS11290 PF00486 Transcriptional regulatory protein, C terminal XF_RS11295 PF13181 Tetratricopeptide repeat XF_RS11295 PF01435 Peptidase family M48 XF_RS11300 PF00462 Glutaredoxin XF_RS11305 PF00180 Isocitrate/isopropylmalate dehydrogenase XF_RS11305 PF18324 Hypothetical protein TT1725 XF_RS11315 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XF_RS11315 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XF_RS11325 PF11953 Domain of unknown function (DUF3470) XF_RS11325 PF00037 4Fe-4S binding domain XF_RS11335 PF01106 NifU-like domain XF_RS11340 PF01329 Pterin 4 alpha carbinolamine dehydratase XF_RS11350 PF00849 RNA pseudouridylate synthase XF_RS11350 PF01479 S4 domain XF_RS11355 PF10150 Ribonuclease E/G family XF_RS11355 PF00575 S1 RNA binding domain XF_RS11355 PF12111 Polyribonucleotide phosphorylase C terminal XF_RS11360 PF00196 Bacterial regulatory proteins, luxR family XF_RS11360 PF00072 Response regulator receiver domain XF_RS11365 PF17773 UPF0176 acylphosphatase like domain XF_RS11375 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XF_RS11375 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XF_RS11380 PF00545 ribonuclease XF_RS11390 PF12848 ABC transporter XF_RS11390 PF16326 ABC transporter C-terminal domain XF_RS11390 PF00005 ABC transporter XF_RS11395 PF02696 Uncharacterized ACR, YdiU/UPF0061 family XF_RS11400 PF00313 'Cold-shock' DNA-binding domain XF_RS11405 PF00072 Response regulator receiver domain XF_RS11405 PF00563 EAL domain XF_RS11405 PF00990 Diguanylate cyclase, GGDEF domain XF_RS11410 PF01435 Peptidase family M48 XF_RS11415 PF03144 Elongation factor Tu domain 2 XF_RS11415 PF00009 Elongation factor Tu GTP binding domain XF_RS11415 PF03143 Elongation factor Tu C-terminal domain XF_RS11420 PF00679 Elongation factor G C-terminus XF_RS11420 PF03764 Elongation factor G, domain IV XF_RS11420 PF00009 Elongation factor Tu GTP binding domain XF_RS11420 PF14492 Elongation Factor G, domain II XF_RS11420 PF03144 Elongation factor Tu domain 2 XF_RS11425 PF00177 Ribosomal protein S7p/S5e XF_RS11430 PF00164 Ribosomal protein S12/S23 XF_RS11435 PF04997 RNA polymerase Rpb1, domain 1 XF_RS11435 PF00623 RNA polymerase Rpb1, domain 2 XF_RS11435 PF04983 RNA polymerase Rpb1, domain 3 XF_RS11435 PF05000 RNA polymerase Rpb1, domain 4 XF_RS11435 PF04998 RNA polymerase Rpb1, domain 5 XF_RS11440 PF04561 RNA polymerase Rpb2, domain 2 XF_RS11440 PF00562 RNA polymerase Rpb2, domain 6 XF_RS11440 PF10385 RNA polymerase beta subunit external 1 domain XF_RS11440 PF04560 RNA polymerase Rpb2, domain 7 XF_RS11440 PF04563 RNA polymerase beta subunit XF_RS11440 PF04565 RNA polymerase Rpb2, domain 3 XF_RS11445 PF00542 Ribosomal protein L7/L12 C-terminal domain XF_RS11445 PF16320 Ribosomal protein L7/L12 dimerisation domain XF_RS11450 PF00466 Ribosomal protein L10 XF_RS11455 PF00687 Ribosomal protein L1p/L10e family XF_RS11460 PF00298 Ribosomal protein L11, RNA binding domain XF_RS11460 PF03946 Ribosomal protein L11, N-terminal domain XF_RS11465 PF02357 Transcription termination factor nusG XF_RS11465 PF00467 KOW motif XF_RS11470 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XF_RS11480 PF00009 Elongation factor Tu GTP binding domain XF_RS11480 PF03144 Elongation factor Tu domain 2 XF_RS11480 PF03143 Elongation factor Tu C-terminal domain XF_RS11500 PF06071 Protein of unknown function (DUF933) XF_RS11500 PF01926 50S ribosome-binding GTPase XF_RS11505 PF01195 Peptidyl-tRNA hydrolase XF_RS11510 PF14693 Ribosomal protein TL5, C-terminal domain XF_RS11510 PF01386 Ribosomal L25p family XF_RS11515 PF14572 Phosphoribosyl synthetase-associated domain XF_RS11515 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XF_RS11525 PF00288 GHMP kinases N terminal domain XF_RS11525 PF08544 GHMP kinases C terminal XF_RS11530 PF03550 Outer membrane lipoprotein LolB XF_RS11540 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XF_RS11540 PF01488 Shikimate / quinate 5-dehydrogenase XF_RS11540 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XF_RS11545 PF00472 RF-1 domain XF_RS11545 PF03462 PCRF domain XF_RS11550 PF10672 S-adenosylmethionine-dependent methyltransferase XF_RS11550 PF02926 THUMP domain XF_RS11550 PF01170 Putative RNA methylase family UPF0020 XF_RS11590 PF01914 MarC family integral membrane protein XF_RS11595 PF00462 Glutaredoxin XF_RS11600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain XF_RS11600 PF02222 ATP-grasp domain XF_RS11605 PF00731 AIR carboxylase XF_RS11610 PF01926 50S ribosome-binding GTPase XF_RS11610 PF12631 MnmE helical domain XF_RS11610 PF10396 GTP-binding protein TrmE N-terminus XF_RS11620 PF07732 Multicopper oxidase XF_RS11620 PF07731 Multicopper oxidase XF_RS11630 PF13361 UvrD-like helicase C-terminal domain XF_RS11630 PF00580 UvrD/REP helicase N-terminal domain XF_RS11635 PF04349 Periplasmic glucan biosynthesis protein, MdoG XF_RS11640 PF01343 Peptidase family S49 XF_RS11645 PF01554 MatE XF_RS11665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain XF_RS11665 PF18074 Primosomal protein N C-terminal domain XF_RS11665 PF17764 3′ DNA-binding domain (3′BD) XF_RS11665 PF00271 Helicase conserved C-terminal domain XF_RS11665 PF00270 DEAD/DEAH box helicase XF_RS11670 PF04545 Sigma-70, region 4 XF_RS11670 PF04542 Sigma-70 region 2 XF_RS11675 PF03167 Uracil DNA glycosylase superfamily XF_RS11680 PF00072 Response regulator receiver domain XF_RS11680 PF01339 CheB methylesterase XF_RS11685 PF18075 FtsX extracellular domain XF_RS11690 PF00005 ABC transporter XF_RS11695 PF00271 Helicase conserved C-terminal domain XF_RS11695 PF12300 ATP-dependent RNA helicase RhlB XF_RS11695 PF00270 DEAD/DEAH box helicase XF_RS11700 PF00085 Thioredoxin XF_RS11705 PF07497 Rho termination factor, RNA-binding domain XF_RS11705 PF07498 Rho termination factor, N-terminal domain XF_RS11705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XF_RS11710 PF03971 Monomeric isocitrate dehydrogenase XF_RS11720 PF13180 PDZ domain XF_RS11720 PF03572 Peptidase family S41 XF_RS11725 PF01551 Peptidase family M23 XF_RS11735 PF00150 Cellulase (glycosyl hydrolase family 5) XF_RS11740 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XF_RS11740 PF07992 Pyridine nucleotide-disulphide oxidoreductase XF_RS11745 PF01645 Conserved region in glutamate synthase XF_RS11745 PF01493 GXGXG motif XF_RS11745 PF04898 Glutamate synthase central domain XF_RS11745 PF00310 Glutamine amidotransferases class-II XF_RS11750 PF14748 Pyrroline-5-carboxylate reductase dimerisation XF_RS11750 PF03807 NADP oxidoreductase coenzyme F420-dependent XF_RS11770 PF00106 short chain dehydrogenase XF_RS11795 PF18766 SWI2/SNF2 ATPase XF_RS11795 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XF_RS11795 PF11867 Domain of unknown function (DUF3387) XF_RS11815 PF18766 SWI2/SNF2 ATPase XF_RS11815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XF_RS11815 PF12008 Type I restriction and modification enzyme - subunit R C terminal XF_RS11820 PF01420 Type I restriction modification DNA specificity domain XF_RS11830 PF12161 HsdM N-terminal domain XF_RS11830 PF02384 N-6 DNA Methylase XF_RS11835 PF01810 LysE type translocator XF_RS11850 PF11855 Protein of unknown function (DUF3375) XF_RS11875 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XF_RS11875 PF11867 Domain of unknown function (DUF3387) XF_RS11875 PF18766 SWI2/SNF2 ATPase XF_RS11890 PF02384 N-6 DNA Methylase XF_RS11960 PF06594 Haemolysin-type calcium binding protein related domain XF_RS11960 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) XF_RS11995 PF01381 Helix-turn-helix XF_RS12000 PF05973 Phage derived protein Gp49-like (DUF891) XF_RS12105 PF10396 GTP-binding protein TrmE N-terminus XF_RS12105 PF01926 50S ribosome-binding GTPase XF_RS12105 PF12631 MnmE helical domain XF_RS12115 PF02096 60Kd inner membrane protein XF_RS12115 PF14849 YidC periplasmic domain XF_RS12120 PF00825 Ribonuclease P XF_RS12125 PF00468 Ribosomal protein L34 XF_RS12160 PF02463 RecF/RecN/SMC N terminal domain XF_RS12280 PF00793 DAHP synthetase I family XF_RS12400 PF00271 Helicase conserved C-terminal domain XF_RS12400 PF17757 UvrB interaction domain XF_RS12400 PF00270 DEAD/DEAH box helicase XF_RS12400 PF02559 CarD-like/TRCF domain XF_RS12400 PF03461 TRCF domain XF_RS12410 PF00271 Helicase conserved C-terminal domain XF_RS12410 PF17757 UvrB interaction domain XF_RS12410 PF02559 CarD-like/TRCF domain XF_RS12410 PF03461 TRCF domain XF_RS12410 PF00270 DEAD/DEAH box helicase XF_RS12535 PF01526 Tn3 transposase DDE domain XF_RS12535 PF13700 Domain of unknown function (DUF4158) XF_RS12565 PF13332 Hemagglutinin repeat XF_RS12565 PF04829 Pre-toxin domain with VENN motif XF_RS12565 PF05860 haemagglutination activity domain XF_RS12595 PF02498 BRO family, N-terminal domain XF_RS12595 PF10548 P22AR C-terminal domain