P303_RS00175	SM00387	Histidine kinase-like ATPases
P303_RS00175	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS00180	SM00382	ATPases associated with a variety of cellular activities
P303_RS00180	SM00448	cheY-homologous receiver domain
P303_RS00220	SM00387	Histidine kinase-like ATPases
P303_RS00220	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS00225	SM00448	cheY-homologous receiver domain
P303_RS00225	SM00862	Transcriptional regulatory protein, C terminal
P303_RS00245	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
P303_RS00270	SM00873	B3/4 domain
P303_RS00270	SM00874	tRNA synthetase B5 domain
P303_RS00270	SM00896	Ferredoxin-fold anticodon binding domain
P303_RS00275	SM00411	bacterial (prokaryotic) histone like domain
P303_RS00280	SM00422	helix_turn_helix, mercury resistance
P303_RS00305	SM00528	Domain in histone-like proteins of HNS family
P303_RS00310	SM00474	3'-5' exonuclease
P303_RS00340	SM00646	P303_RS00340
P303_RS00345	SM00853	MutL C terminal dimerisation domain
P303_RS00345	SM01340	P303_RS00345
P303_RS00375	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
P303_RS00380	SM00849	Metallo-beta-lactamase superfamily
P303_RS00430	SM00869	Autotransporter beta-domain
P303_RS00520	SM00842	Cell division protein FtsA
P303_RS00525	SM00864	Tubulin/FtsZ family, GTPase domain
P303_RS00525	SM00865	Tubulin/FtsZ family, C-terminal domain
P303_RS00545	SM00957	SecA DEAD-like domain
P303_RS00545	SM00958	SecA preprotein cross-linking domain
P303_RS00575	SM00637	P303_RS00575
P303_RS00685	SM01149	P303_RS00685
P303_RS00695	SM00758	P303_RS00695
P303_RS00695	SM01217	P303_RS00695
P303_RS00710	SM00636	P303_RS00710
P303_RS00725	SM01005	Alanine racemase, C-terminal domain
P303_RS00735	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
P303_RS00735	SM00387	Histidine kinase-like ATPases
P303_RS00735	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS00745	SM00257	Lysin motif
P303_RS00815	SM00382	ATPases associated with a variety of cellular activities
P303_RS00815	SM00930	P303_RS00815
P303_RS00835	SM00947	Carbonic anhydrase
P303_RS00855	SM00840	P303_RS00855
P303_RS00890	SM00859	Semialdehyde dehydrogenase, NAD binding domain
P303_RS00900	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
P303_RS00970	SM00529	Helix-turn-helix diphteria tox regulatory element
P303_RS01000	SM00869	Autotransporter beta-domain
P303_RS01010	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
P303_RS01015	SM00563	Phosphate acyltransferases
P303_RS01030	SM00996	S-adenosyl-L-homocysteine hydrolase
P303_RS01030	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
P303_RS01070	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P303_RS01160	SM00382	ATPases associated with a variety of cellular activities
P303_RS01210	SM00382	ATPases associated with a variety of cellular activities
P303_RS01215	SM00849	Metallo-beta-lactamase superfamily
P303_RS01230	SM00382	ATPases associated with a variety of cellular activities
P303_RS01315	SM00990	P303_RS01315
P303_RS01325	SM00487	DEAD-like helicases superfamily
P303_RS01345	SM00855	Phosphoglycerate mutase family
P303_RS01350	SM00867	YceI-like domain 
P303_RS01355	SM00155	Phospholipase D. Active site motifs.
P303_RS01395	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
P303_RS01395	SM00474	3'-5' exonuclease
P303_RS01395	SM00475	5'-3' exonuclease
P303_RS01395	SM00482	DNA polymerase A domain
P303_RS01405	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
P303_RS01410	SM00851	MGS-like domain
P303_RS01410	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
P303_RS01430	SM00937	P303_RS01430
P303_RS01440	SM00448	cheY-homologous receiver domain
P303_RS01440	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
P303_RS01445	SM00387	Histidine kinase-like ATPases
P303_RS01445	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS01445	SM00448	cheY-homologous receiver domain
P303_RS01495	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS01550	SM00830	Chorismate mutase type II
P303_RS01560	SM00382	ATPases associated with a variety of cellular activities
P303_RS01600	SM01403	P303_RS01600
P303_RS01615	SM01382	P303_RS01615
P303_RS01615	SM01383	P303_RS01615
P303_RS01630	SM00322	K homology RNA-binding domain
P303_RS01650	SM01374	P303_RS01650
P303_RS01655	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
P303_RS01705	SM00363	S4 RNA-binding domain
P303_RS01705	SM01390	P303_RS01705
P303_RS01710	SM00662	RNA polymerases D
P303_RS01725	SM00382	ATPases associated with a variety of cellular activities
P303_RS01745	SM00984	UDP binding domain
P303_RS01770	SM00382	ATPases associated with a variety of cellular activities
P303_RS01770	SM00994	ClpX C4-type zinc finger
P303_RS01770	SM01086	C-terminal, D2-small domain, of ClpB protein
P303_RS01775	SM00382	ATPases associated with a variety of cellular activities
P303_RS01775	SM00464	Found in ATP-dependent protease La (LON)
P303_RS01780	SM00411	bacterial (prokaryotic) histone like domain
P303_RS01850	SM00155	Phospholipase D. Active site motifs.
P303_RS01870	SM00838	Elongation factor G C-terminus
P303_RS01890	SM00382	ATPases associated with a variety of cellular activities
P303_RS01900	SM00382	ATPases associated with a variety of cellular activities
P303_RS01920	SM00487	DEAD-like helicases superfamily
P303_RS01920	SM00490	helicase superfamily c-terminal domain
P303_RS01920	SM00847	Helicase associated domain (HA2)  Add an annotation
P303_RS02005	SM01359	P303_RS02005
P303_RS02005	SM01360	P303_RS02005
P303_RS02015	SM00342	helix_turn_helix, arabinose operon control protein
P303_RS02025	SM00479	P303_RS02025
P303_RS02055	SM00869	Autotransporter beta-domain
P303_RS02060	SM00637	P303_RS02060
P303_RS02065	SM00729	Elongator protein 3, MiaB family, Radical SAM
P303_RS02100	SM00116	Domain in cystathionine beta-synthase and other proteins.
P303_RS02100	SM01091	Transporter associated domain
P303_RS02115	SM00387	Histidine kinase-like ATPases
P303_RS02115	SM00433	TopoisomeraseII
P303_RS02135	SM01192	P303_RS02135
P303_RS02135	SM01193	P303_RS02135
P303_RS02155	SM00463	Small MutS-related domain
P303_RS02185	SM00382	ATPases associated with a variety of cellular activities
P303_RS02210	SM00268	Actin
P303_RS02240	SM00954	Region found in RelA / SpoT proteins
P303_RS02280	SM00478	endonuclease III
P303_RS02285	SM00867	YceI-like domain 
P303_RS02295	SM00867	YceI-like domain 
P303_RS02300	SM00387	Histidine kinase-like ATPases
P303_RS02300	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS02300	SM00448	cheY-homologous receiver domain
P303_RS02370	SM00382	ATPases associated with a variety of cellular activities
P303_RS02385	SM00434	DNA Topoisomerase IV
P303_RS02390	SM00347	helix_turn_helix multiple antibiotic resistance protein
P303_RS02415	SM00849	Metallo-beta-lactamase superfamily
P303_RS02450	SM00859	Semialdehyde dehydrogenase, NAD binding domain
P303_RS02480	SM00382	ATPases associated with a variety of cellular activities
P303_RS02495	SM00341	Helicase and RNase D C-terminal
P303_RS02495	SM00487	DEAD-like helicases superfamily
P303_RS02495	SM00490	helicase superfamily c-terminal domain
P303_RS02495	SM00956	P303_RS02495
P303_RS02505	SM00382	ATPases associated with a variety of cellular activities
P303_RS02505	SM00487	DEAD-like helicases superfamily
P303_RS02505	SM00490	helicase superfamily c-terminal domain
P303_RS02505	SM00847	Helicase associated domain (HA2)  Add an annotation
P303_RS02530	SM00487	DEAD-like helicases superfamily
P303_RS02540	SM00990	P303_RS02540
P303_RS02545	SM00482	DNA polymerase A domain
P303_RS02550	SM01040	BRO family, N-terminal domain
P303_RS02605	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS02640	SM01040	BRO family, N-terminal domain
P303_RS02645	SM00885	D5 N terminal like
P303_RS02725	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS02735	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS02855	SM00924	MgtE intracellular N domain
P303_RS02895	SM00382	ATPases associated with a variety of cellular activities
P303_RS02915	SM00116	Domain in cystathionine beta-synthase and other proteins.
P303_RS02950	SM01211	P303_RS02950
P303_RS03030	SM00382	ATPases associated with a variety of cellular activities
P303_RS03030	SM01086	C-terminal, D2-small domain, of ClpB protein
P303_RS03035	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS03055	SM00382	ATPases associated with a variety of cellular activities
P303_RS03055	SM00843	P303_RS03055
P303_RS03070	SM00382	ATPases associated with a variety of cellular activities
P303_RS03080	SM00387	Histidine kinase-like ATPases
P303_RS03080	SM00448	cheY-homologous receiver domain
P303_RS03120	SM00354	helix_turn _helix lactose operon repressor
P303_RS03175	SM00382	ATPases associated with a variety of cellular activities
P303_RS03190	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
P303_RS03220	SM00382	ATPases associated with a variety of cellular activities
P303_RS03220	SM01086	C-terminal, D2-small domain, of ClpB protein
P303_RS03235	SM01263	P303_RS03235
P303_RS03245	SM00347	helix_turn_helix multiple antibiotic resistance protein
P303_RS03250	SM00528	Domain in histone-like proteins of HNS family
P303_RS03255	SM00028	Tetratricopeptide repeats
P303_RS03300	SM01409	P303_RS03300
P303_RS03305	SM00072	Guanylate kinase homologues.
P303_RS03325	SM00729	Elongator protein 3, MiaB family, Radical SAM
P303_RS03370	SM00382	ATPases associated with a variety of cellular activities
P303_RS03480	SM00100	Cyclic nucleotide-monophosphate binding domain
P303_RS03480	SM00419	helix_turn_helix, cAMP Regulatory protein
P303_RS03525	SM00861	Transketolase, pyrimidine binding domain
P303_RS03530	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
P303_RS03590	SM01228	P303_RS03590
P303_RS03740	SM01321	P303_RS03740
P303_RS03800	SM00857	Resolvase, N terminal domain
P303_RS03815	SM00849	Metallo-beta-lactamase superfamily
P303_RS03825	SM00479	P303_RS03825
P303_RS03880	SM01011	Aminopeptidase P, N-terminal domain
P303_RS03935	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS03970	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS03970	SM00357	Cold shock protein domain
P303_RS03970	SM00955	P303_RS03970
P303_RS03975	SM00967	RNA 2'-O ribose methyltransferase substrate binding
P303_RS04010	SM01209	P303_RS04010
P303_RS04010	SM01210	P303_RS04010
P303_RS04015	SM00798	AICARFT/IMPCHase bienzyme
P303_RS04015	SM00851	MGS-like domain
P303_RS04095	SM00448	cheY-homologous receiver domain
P303_RS04100	SM00260	Two component signalling adaptor domain
P303_RS04105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
P303_RS04110	SM00073	Histidine Phosphotransfer domain
P303_RS04110	SM00260	Two component signalling adaptor domain
P303_RS04110	SM00387	Histidine kinase-like ATPases
P303_RS04110	SM00448	cheY-homologous receiver domain
P303_RS04110	SM01231	P303_RS04110
P303_RS04155	SM00411	bacterial (prokaryotic) histone like domain
P303_RS04175	SM00861	Transketolase, pyrimidine binding domain
P303_RS04285	SM00507	HNH nucleases
P303_RS04295	SM00382	ATPases associated with a variety of cellular activities
P303_RS04295	SM00962	SRP54-type protein, GTPase domain
P303_RS04295	SM00963	SRP54-type protein, helical bundle domain
P303_RS04300	SM00478	endonuclease III
P303_RS04300	SM00525	P303_RS04300
P303_RS04320	SM00278	Helix-hairpin-helix DNA-binding motif class 1
P303_RS04330	SM00382	ATPases associated with a variety of cellular activities
P303_RS04375	SM00855	Phosphoglycerate mutase family
P303_RS04410	SM00855	Phosphoglycerate mutase family
P303_RS04650	SM00245	tail specific protease
P303_RS04655	SM00869	Autotransporter beta-domain
P303_RS04675	SM00387	Histidine kinase-like ATPases
P303_RS04675	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS04680	SM00382	ATPases associated with a variety of cellular activities
P303_RS04680	SM00448	cheY-homologous receiver domain
P303_RS04690	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
P303_RS04690	SM00493	P303_RS04690
P303_RS04700	SM00938	Nitrogen regulatory protein P-II
P303_RS04705	SM01230	P303_RS04705
P303_RS04715	SM00867	YceI-like domain 
P303_RS04725	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS04835	SM00885	D5 N terminal like
P303_RS04840	SM01040	BRO family, N-terminal domain
P303_RS04860	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS04920	SM00482	DNA polymerase A domain
P303_RS04925	SM00990	P303_RS04925
P303_RS04935	SM00487	DEAD-like helicases superfamily
P303_RS04955	SM00248	ankyrin repeats
P303_RS04965	SM00825	Beta-ketoacyl synthase
P303_RS04990	SM00382	ATPases associated with a variety of cellular activities
P303_RS05015	SM00448	cheY-homologous receiver domain
P303_RS05015	SM00850	LytTr DNA-binding domain
P303_RS05045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
P303_RS05090	SM00984	UDP binding domain
P303_RS05105	SM00382	ATPases associated with a variety of cellular activities
P303_RS05170	SM00966	SpoVT / AbrB like domain 
P303_RS05205	SM00857	Resolvase, N terminal domain
P303_RS05215	SM00990	P303_RS05215
P303_RS05225	SM00487	DEAD-like helicases superfamily
P303_RS05240	SM00382	ATPases associated with a variety of cellular activities
P303_RS05280	SM00382	ATPases associated with a variety of cellular activities
P303_RS05290	SM00479	P303_RS05290
P303_RS05295	SM00650	Ribosomal RNA adenine dimethylases
P303_RS05335	SM00331	Sigma factor PP2C-like phosphatases
P303_RS05335	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
P303_RS05340	SM00479	P303_RS05340
P303_RS05355	SM00849	Metallo-beta-lactamase superfamily
P303_RS05360	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS05360	SM00732	Likely ribonuclease with RNase H fold.
P303_RS05365	SM00028	Tetratricopeptide repeats
P303_RS05510	SM00841	Elongation factor P, C-terminal
P303_RS05510	SM01185	P303_RS05510
P303_RS05535	SM01007	Class II Aldolase and Adducin N-terminal domain
P303_RS05620	SM00732	Likely ribonuclease with RNase H fold.
P303_RS05630	SM00936	Penicillin-binding protein 5, C-terminal domain 
P303_RS05645	SM00271	DnaJ molecular chaperone homology domain
P303_RS05685	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P303_RS05690	SM00838	Elongation factor G C-terminus
P303_RS05705	SM00358	Double-stranded RNA binding motif
P303_RS05705	SM00535	Ribonuclease III family
P303_RS05720	SM00861	Transketolase, pyrimidine binding domain
P303_RS05750	SM00564	beta-propeller repeat
P303_RS05810	SM01259	P303_RS05810
P303_RS05825	SM00470	ParB-like nuclease domain
P303_RS05835	SM00849	Metallo-beta-lactamase superfamily
P303_RS05885	SM00278	Helix-hairpin-helix DNA-binding motif class 1
P303_RS05885	SM00465	GIY-YIG type nucleases (URI domain)
P303_RS05910	SM01004	Delta-aminolevulinic acid dehydratase
P303_RS05945	SM00226	Low molecular weight phosphatase family
P303_RS05960	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS06045	SM00830	Chorismate mutase type II
P303_RS06065	SM00382	ATPases associated with a variety of cellular activities
P303_RS06095	SM00448	cheY-homologous receiver domain
P303_RS06095	SM00862	Transcriptional regulatory protein, C terminal
P303_RS06105	SM00271	DnaJ molecular chaperone homology domain
P303_RS06155	SM00869	Autotransporter beta-domain
P303_RS06160	SM00357	Cold shock protein domain
P303_RS06180	SM01118	P303_RS06180
P303_RS06245	SM01329	P303_RS06245
P303_RS06295	SM00829	Enoylreductase
P303_RS06310	SM00450	Rhodanese Homology Domain
P303_RS06325	SM00382	ATPases associated with a variety of cellular activities
P303_RS06435	SM00904	Riboflavin kinase
P303_RS06485	SM00116	Domain in cystathionine beta-synthase and other proteins.
P303_RS06485	SM01240	P303_RS06485
P303_RS06510	SM00028	Tetratricopeptide repeats
P303_RS06520	SM00411	bacterial (prokaryotic) histone like domain
P303_RS06525	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS06595	SM00363	S4 RNA-binding domain
P303_RS06615	SM00382	ATPases associated with a variety of cellular activities
P303_RS06650	SM00028	Tetratricopeptide repeats
P303_RS06695	SM00841	Elongation factor P, C-terminal
P303_RS06695	SM01185	P303_RS06695
P303_RS06745	SM00825	Beta-ketoacyl synthase
P303_RS06755	SM00822	P303_RS06755
P303_RS06760	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
P303_RS06810	SM00977	TilS substrate C-terminal domain
P303_RS06815	SM00098	Alkaline phosphatase homologues
P303_RS06850	SM01160	P303_RS06850
P303_RS06860	SM00478	endonuclease III
P303_RS06860	SM00525	P303_RS06860
P303_RS06925	SM00883	Chaperonin 10 Kd subunit
P303_RS06980	SM00116	Domain in cystathionine beta-synthase and other proteins.
P303_RS07005	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
P303_RS07045	SM00382	ATPases associated with a variety of cellular activities
P303_RS07255	SM00400	zinc finger
P303_RS07325	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS07480	SM00400	zinc finger
P303_RS07590	SM00052	Putative diguanylate phosphodiesterase
P303_RS07595	SM00450	Rhodanese Homology Domain
P303_RS07600	SM00382	ATPases associated with a variety of cellular activities
P303_RS07605	SM00564	beta-propeller repeat
P303_RS07620	SM00028	Tetratricopeptide repeats
P303_RS07630	SM00562	P303_RS07630
P303_RS07635	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
P303_RS07640	SM00788	Adenylosuccinate synthetase
P303_RS07650	SM00244	prohibitin homologues
P303_RS07655	SM00244	prohibitin homologues
P303_RS07660	SM00829	Enoylreductase
P303_RS07665	SM00448	cheY-homologous receiver domain
P303_RS07675	SM00528	Domain in histone-like proteins of HNS family
P303_RS07705	SM01217	P303_RS07705
P303_RS07715	SM00905	Dihydroneopterin aldolase
P303_RS07740	SM00400	zinc finger
P303_RS07740	SM00493	P303_RS07740
P303_RS07740	SM00766	DNA primase DnaG DnaB-binding
P303_RS07790	SM00382	ATPases associated with a variety of cellular activities
P303_RS07830	SM00382	ATPases associated with a variety of cellular activities
P303_RS07870	SM00052	Putative diguanylate phosphodiesterase
P303_RS07870	SM00448	cheY-homologous receiver domain
P303_RS07915	SM00387	Histidine kinase-like ATPases
P303_RS07920	SM00448	cheY-homologous receiver domain
P303_RS07920	SM00862	Transcriptional regulatory protein, C terminal
P303_RS07950	SM00382	ATPases associated with a variety of cellular activities
P303_RS07950	SM01086	C-terminal, D2-small domain, of ClpB protein
P303_RS07980	SM00965	Secretin and TonB N terminus short domain
P303_RS08045	SM00487	DEAD-like helicases superfamily
P303_RS08045	SM00490	helicase superfamily c-terminal domain
P303_RS08055	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
P303_RS08055	SM00954	Region found in RelA / SpoT proteins
P303_RS08315	SM01040	BRO family, N-terminal domain
P303_RS08320	SM01040	BRO family, N-terminal domain
P303_RS08410	SM01040	BRO family, N-terminal domain
P303_RS08415	SM00482	DNA polymerase A domain
P303_RS08420	SM00990	P303_RS08420
P303_RS08430	SM00487	DEAD-like helicases superfamily
P303_RS08475	SM00833	Cobalamin synthesis protein cobW C-terminal domain
P303_RS08500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P303_RS08500	SM00245	tail specific protease
P303_RS08525	SM00917	LeuA allosteric (dimerisation) domain
P303_RS08560	SM00460	Transglutaminase/protease-like homologues
P303_RS08575	SM00493	P303_RS08575
P303_RS08585	SM00382	ATPases associated with a variety of cellular activities
P303_RS08620	SM00450	Rhodanese Homology Domain
P303_RS08705	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
P303_RS08705	SM00534	ATPase domain of DNA mismatch repair MUTS family
P303_RS08735	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS08845	SM00885	D5 N terminal like
P303_RS08850	SM01040	BRO family, N-terminal domain
P303_RS08870	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS08920	SM01040	BRO family, N-terminal domain
P303_RS08925	SM00482	DNA polymerase A domain
P303_RS08930	SM00990	P303_RS08930
P303_RS08940	SM00487	DEAD-like helicases superfamily
P303_RS08960	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS09185	SM01040	BRO family, N-terminal domain
P303_RS09190	SM01040	BRO family, N-terminal domain
P303_RS09195	SM01040	BRO family, N-terminal domain
P303_RS09295	SM01040	BRO family, N-terminal domain
P303_RS09315	SM00487	DEAD-like helicases superfamily
P303_RS09315	SM00490	helicase superfamily c-terminal domain
P303_RS09330	SM01130	P303_RS09330
P303_RS09410	SM00382	ATPases associated with a variety of cellular activities
P303_RS09430	SM00363	S4 RNA-binding domain
P303_RS09450	SM00899	P303_RS09450
P303_RS09475	SM00257	Lysin motif
P303_RS09490	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
P303_RS09490	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
P303_RS09490	SM00493	P303_RS09490
P303_RS09515	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS09555	SM00729	Elongator protein 3, MiaB family, Radical SAM
P303_RS09575	SM00116	Domain in cystathionine beta-synthase and other proteins.
P303_RS09575	SM01091	Transporter associated domain
P303_RS09650	SM00491	P303_RS09650
P303_RS09670	SM01234	P303_RS09670
P303_RS09685	SM00267	diguanylate cyclase
P303_RS09715	SM00387	Histidine kinase-like ATPases
P303_RS09720	SM00919	Malic enzyme, NAD binding domain
P303_RS09720	SM01274	P303_RS09720
P303_RS09735	SM00387	Histidine kinase-like ATPases
P303_RS09735	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS09735	SM00448	cheY-homologous receiver domain
P303_RS09740	SM00421	helix_turn_helix, Lux Regulon
P303_RS09740	SM00448	cheY-homologous receiver domain
P303_RS09750	SM00387	Histidine kinase-like ATPases
P303_RS09750	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS09755	SM00448	cheY-homologous receiver domain
P303_RS09755	SM00862	Transcriptional regulatory protein, C terminal
P303_RS09810	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
P303_RS09815	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
P303_RS09875	SM00530	Helix-turn-helix XRE-family like proteins 
P303_RS09935	SM00966	SpoVT / AbrB like domain 
P303_RS09955	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P303_RS10025	SM00869	Autotransporter beta-domain
P303_RS10080	SM00893	Electron transfer flavoprotein domain
P303_RS10085	SM00893	Electron transfer flavoprotein domain
P303_RS10095	SM00487	DEAD-like helicases superfamily
P303_RS10095	SM00490	helicase superfamily c-terminal domain
P303_RS10140	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS10140	SM00322	K homology RNA-binding domain
P303_RS10145	SM01387	P303_RS10145
P303_RS10165	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS10165	SM00322	K homology RNA-binding domain
P303_RS10230	SM01323	P303_RS10230
P303_RS10270	SM00347	helix_turn_helix multiple antibiotic resistance protein
P303_RS10305	SM00271	DnaJ molecular chaperone homology domain
P303_RS10315	SM00481	DNA polymerase alpha chain like domain
P303_RS10340	SM00563	Phosphate acyltransferases
P303_RS10355	SM00487	DEAD-like helicases superfamily
P303_RS10355	SM00490	helicase superfamily c-terminal domain
P303_RS10385	SM00244	prohibitin homologues
P303_RS10435	SM00822	P303_RS10435
P303_RS10450	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
P303_RS10450	SM01232	P303_RS10450
P303_RS10480	SM00363	S4 RNA-binding domain
P303_RS10525	SM00645	Papain family cysteine protease
P303_RS10565	SM00836	DALR anticodon binding domain
P303_RS10565	SM01016	Arginyl tRNA synthetase N terminal dom
P303_RS10675	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
P303_RS10680	SM00382	ATPases associated with a variety of cellular activities
P303_RS10695	SM00710	Parallel beta-helix repeats
P303_RS10695	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
P303_RS10700	SM01172	P303_RS10700
P303_RS10745	SM00812	Alpha-L-fucosidase
P303_RS10785	SM01103	P303_RS10785
P303_RS10870	SM00382	ATPases associated with a variety of cellular activities
P303_RS10870	SM00962	SRP54-type protein, GTPase domain
P303_RS10870	SM00963	SRP54-type protein, helical bundle domain
P303_RS10880	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
P303_RS10880	SM01232	P303_RS10880
P303_RS10925	SM00729	Elongator protein 3, MiaB family, Radical SAM
P303_RS10925	SM00876	Biotin and Thiamin Synthesis associated domain
P303_RS10935	SM00470	ParB-like nuclease domain
P303_RS10960	SM00878	Biotin carboxylase C-terminal domain
P303_RS10975	SM00487	DEAD-like helicases superfamily
P303_RS10975	SM00490	helicase superfamily c-terminal domain
P303_RS10975	SM00982	P303_RS10975
P303_RS10975	SM01058	CarD-like/TRCF domain
P303_RS11015	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
P303_RS11110	SM00028	Tetratricopeptide repeats
P303_RS11125	SM00387	Histidine kinase-like ATPases
P303_RS11125	SM00433	TopoisomeraseII
P303_RS11140	SM00480	DNA polymerase III beta subunit
P303_RS11145	SM00382	ATPases associated with a variety of cellular activities
P303_RS11145	SM00760	Bacterial dnaA protein helix-turn-helix domain
P303_RS11290	SM00487	DEAD-like helicases superfamily
P303_RS11345	SM00812	Alpha-L-fucosidase
P303_RS11390	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
P303_RS11390	SM00245	tail specific protease
P303_RS11400	SM00357	Cold shock protein domain
P303_RS11400	SM00382	ATPases associated with a variety of cellular activities
P303_RS11400	SM00959	Rho termination factor, N-terminal domain
P303_RS11410	SM00487	DEAD-like helicases superfamily
P303_RS11410	SM00490	helicase superfamily c-terminal domain
P303_RS11415	SM00382	ATPases associated with a variety of cellular activities
P303_RS11425	SM00448	cheY-homologous receiver domain
P303_RS11430	SM00986	Uracil DNA glycosylase superfamily
P303_RS11430	SM00987	UreE urease accessory protein, C-terminal domain 
P303_RS11440	SM00487	DEAD-like helicases superfamily
P303_RS11440	SM00490	helicase superfamily c-terminal domain
P303_RS11505	SM01001	AIR carboxylase
P303_RS11545	SM00644	P303_RS11545
P303_RS11555	SM00981	P303_RS11555
P303_RS11560	SM00937	P303_RS11560
P303_RS11570	SM00028	Tetratricopeptide repeats
P303_RS11590	SM01400	P303_RS11590
P303_RS11640	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
P303_RS11640	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
P303_RS11645	SM00649	Ribosomal protein L11/L12
P303_RS11670	SM00663	RNA polymerase I subunit A N-terminus
P303_RS11685	SM00838	Elongation factor G C-terminus
P303_RS11685	SM00889	Elongation factor G, domain IV
P303_RS11700	SM00052	Putative diguanylate phosphodiesterase
P303_RS11700	SM00267	diguanylate cyclase
P303_RS11705	SM00357	Cold shock protein domain
P303_RS11720	SM00382	ATPases associated with a variety of cellular activities
P303_RS11740	SM00448	cheY-homologous receiver domain
P303_RS11745	SM00450	Rhodanese Homology Domain
P303_RS11750	SM00421	helix_turn_helix, Lux Regulon
P303_RS11750	SM00448	cheY-homologous receiver domain
P303_RS11755	SM00316	Ribosomal protein S1-like RNA-binding domain
P303_RS11760	SM00363	S4 RNA-binding domain
P303_RS11800	SM01329	P303_RS11800
P303_RS11815	SM00448	cheY-homologous receiver domain
P303_RS11815	SM00862	Transcriptional regulatory protein, C terminal
P303_RS11820	SM00387	Histidine kinase-like ATPases
P303_RS11820	SM00388	His Kinase A (phosphoacceptor) domain
P303_RS11855	SM00382	ATPases associated with a variety of cellular activities
P303_RS11875	SM00448	cheY-homologous receiver domain
P303_RS11880	SM00387	Histidine kinase-like ATPases
P303_RS11890	SM00014	Acid phosphatase homologues
P303_RS11915	SM00382	ATPases associated with a variety of cellular activities
P303_RS11950	SM00968	SMC proteins Flexible Hinge Domain
P303_RS11955	SM00771	ZipA, C-terminal domain (FtsZ-binding)
P303_RS11965	SM00292	breast cancer carboxy-terminal domain
P303_RS11965	SM00532	Ligase N family
P303_RS11990	SM00434	DNA Topoisomerase IV
P303_RS12020	SM00881	CoA binding domain
P303_RS12050	SM01040	BRO family, N-terminal domain
