XFUD_RS00005 PF00308 Bacterial dnaA protein XFUD_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix XFUD_RS00005 PF11638 DnaA N-terminal domain XFUD_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain XFUD_RS00010 PF02767 DNA polymerase III beta subunit, central domain XFUD_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain XFUD_RS00015 PF02463 RecF/RecN/SMC N terminal domain XFUD_RS00025 PF00204 DNA gyrase B XFUD_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus XFUD_RS00025 PF01751 Toprim domain XFUD_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS00030 PF02517 CAAX protease self-immunity XFUD_RS00035 PF01435 Peptidase family M48 XFUD_RS00040 PF13181 Tetratricopeptide repeat XFUD_RS00040 PF13432 Tetratricopeptide repeat XFUD_RS00045 PF03544 Gram-negative bacterial TonB protein C-terminal XFUD_RS00050 PF01618 XFUD_RS00050 XFUD_RS00055 PF02472 Biopolymer transport protein ExbD/TolR XFUD_RS00060 PF02472 Biopolymer transport protein ExbD/TolR XFUD_RS00065 PF00326 Prolyl oligopeptidase family XFUD_RS00065 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region XFUD_RS00075 PF01218 Coproporphyrinogen III oxidase XFUD_RS00105 PF00793 DAHP synthetase I family XFUD_RS00120 PF12019 Type II transport protein GspH XFUD_RS00120 PF13633 Prokaryotic N-terminal methylation site XFUD_RS00130 PF16074 XFUD_RS00130 XFUD_RS00135 PF13681 XFUD_RS00135 XFUD_RS00135 PF14341 XFUD_RS00135 XFUD_RS00140 PF05567 Neisseria PilC beta-propeller domain XFUD_RS00150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family XFUD_RS00155 PF00155 Aminotransferase class I and II XFUD_RS00165 PF01741 Large-conductance mechanosensitive channel, MscL XFUD_RS00180 PF07399 XFUD_RS00180 XFUD_RS00185 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ XFUD_RS00190 PF13302 Acetyltransferase (GNAT) domain XFUD_RS00195 PF00270 DEAD/DEAH box helicase XFUD_RS00195 PF00271 Helicase conserved C-terminal domain XFUD_RS00195 PF02559 CarD-like/TRCF domain XFUD_RS00195 PF03461 TRCF domain XFUD_RS00205 PF01220 Dehydroquinase class II XFUD_RS00210 PF00364 Biotin-requiring enzyme XFUD_RS00215 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain XFUD_RS00215 PF02785 Biotin carboxylase C-terminal domain XFUD_RS00215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XFUD_RS00220 PF00580 UvrD/REP helicase N-terminal domain XFUD_RS00220 PF13361 UvrD-like helicase C-terminal domain XFUD_RS00230 PF00042 Globin XFUD_RS00230 PF00175 Oxidoreductase NAD-binding domain XFUD_RS00230 PF00970 Oxidoreductase FAD-binding domain XFUD_RS00245 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ XFUD_RS00250 PF02195 ParB-like nuclease domain XFUD_RS00250 PF08535 KorB domain XFUD_RS00255 PF00156 Phosphoribosyl transferase domain XFUD_RS00260 PF04055 Radical SAM superfamily XFUD_RS00260 PF06968 Biotin and Thiamin Synthesis associated domain XFUD_RS00265 PF01734 Patatin-like phospholipase XFUD_RS00275 PF01040 UbiA prenyltransferase family XFUD_RS00310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XFUD_RS00310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XFUD_RS00315 PF01578 XFUD_RS00315 XFUD_RS00320 PF00448 SRP54-type protein, GTPase domain XFUD_RS00320 PF02881 SRP54-type protein, helical bundle domain XFUD_RS00320 PF02978 Signal peptide binding domain XFUD_RS00330 PF01063 Aminotransferase class IV XFUD_RS00335 PF00419 Fimbrial protein XFUD_RS00340 PF00419 Fimbrial protein XFUD_RS00345 PF00419 Fimbrial protein XFUD_RS00350 PF00577 Outer membrane usher protein XFUD_RS00350 PF13953 PapC C-terminal domain XFUD_RS00350 PF13954 PapC N-terminal domain XFUD_RS00355 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain XFUD_RS00355 PF02753 Pili assembly chaperone PapD, C-terminal domain XFUD_RS00360 PF16970 XFUD_RS00360 XFUD_RS00365 PF02464 Competence-damaged protein XFUD_RS00370 PF00083 Sugar (and other) transporter XFUD_RS00375 PF01926 50S ribosome-binding GTPase XFUD_RS00375 PF13167 XFUD_RS00375 XFUD_RS00375 PF16360 XFUD_RS00375 XFUD_RS00385 PF01715 IPP transferase XFUD_RS00390 PF00809 Pterin binding enzyme XFUD_RS00400 PF00004 ATPase family associated with various cellular activities (AAA) XFUD_RS00400 PF01434 Peptidase family M41 XFUD_RS00400 PF06480 FtsH Extracellular XFUD_RS00405 PF01728 FtsJ-like methyltransferase XFUD_RS00410 PF01985 CRS1 / YhbY (CRM) domain XFUD_RS00415 PF04430 Protein of unknown function (DUF498/DUF598) XFUD_RS00420 PF00920 Dehydratase family XFUD_RS00430 PF10276 Zinc-finger domain XFUD_RS00435 PF00534 Glycosyl transferases group 1 XFUD_RS00435 PF13439 Glycosyltransferase Family 4 XFUD_RS00440 PF04932 XFUD_RS00440 XFUD_RS00445 PF03279 XFUD_RS00445 XFUD_RS00450 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) XFUD_RS00455 PF00754 F5/8 type C domain XFUD_RS00455 PF01120 Alpha-L-fucosidase XFUD_RS00460 PF00886 Ribosomal protein S16 XFUD_RS00465 PF01782 RimM N-terminal domain XFUD_RS00465 PF05239 PRC-barrel domain XFUD_RS00470 PF01746 tRNA (Guanine-1)-methyltransferase XFUD_RS00475 PF01245 Ribosomal protein L19 XFUD_RS00485 PF00557 Metallopeptidase family M24 XFUD_RS00495 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS00495 PF14602 Hexapeptide repeat of succinyl-transferase XFUD_RS00495 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal XFUD_RS00500 PF03960 ArsC family XFUD_RS00505 PF01546 Peptidase family M20/M25/M40 XFUD_RS00505 PF07687 Peptidase dimerisation domain XFUD_RS00510 PF00733 Asparagine synthase XFUD_RS00510 PF13537 Glutamine amidotransferase domain XFUD_RS00515 PF13229 Right handed beta helix region XFUD_RS00520 PF03060 Nitronate monooxygenase XFUD_RS00525 PF00717 Peptidase S24-like XFUD_RS00525 PF01726 LexA DNA binding domain XFUD_RS00530 PF00154 recA bacterial DNA recombination protein XFUD_RS00535 PF01411 tRNA synthetases class II (A) XFUD_RS00535 PF02272 DHHA1 domain XFUD_RS00535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XFUD_RS00540 PF02599 Global regulator protein family XFUD_RS00550 PF01432 Peptidase family M3 XFUD_RS00555 PF00291 Pyridoxal-phosphate dependent enzyme XFUD_RS00565 PF00394 Multicopper oxidase XFUD_RS00565 PF07731 Multicopper oxidase XFUD_RS00565 PF07732 Multicopper oxidase XFUD_RS00570 PF05275 XFUD_RS00570 XFUD_RS00575 PF00133 tRNA synthetases class I (I, L, M and V) XFUD_RS00575 PF08264 Anticodon-binding domain of tRNA XFUD_RS00575 PF10458 Valyl tRNA synthetase tRNA binding arm XFUD_RS00585 PF04364 DNA polymerase III chi subunit, HolC XFUD_RS00595 PF00883 Cytosol aminopeptidase family, catalytic domain XFUD_RS00595 PF02789 Cytosol aminopeptidase family, N-terminal domain XFUD_RS00600 PF03739 XFUD_RS00600 XFUD_RS00605 PF03739 XFUD_RS00605 XFUD_RS00610 PF06271 XFUD_RS00610 XFUD_RS00615 PF01380 SIS domain XFUD_RS00615 PF13522 Glutamine amidotransferase domain XFUD_RS00620 PF01757 XFUD_RS00620 XFUD_RS00625 PF01564 Spermine/spermidine synthase XFUD_RS00630 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XFUD_RS00630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XFUD_RS00635 PF00106 short chain dehydrogenase XFUD_RS00640 PF05036 Sporulation related domain XFUD_RS00645 PF00750 tRNA synthetases class I (R) XFUD_RS00645 PF03485 Arginyl tRNA synthetase N terminal domain XFUD_RS00645 PF05746 DALR anticodon binding domain XFUD_RS00650 PF04002 RadC-like JAB domain XFUD_RS00655 PF02441 Flavoprotein XFUD_RS00655 PF04127 DNA / pantothenate metabolism flavoprotein XFUD_RS00660 PF00692 dUTPase XFUD_RS00665 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFUD_RS00665 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFUD_RS00665 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFUD_RS00665 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFUD_RS00675 PF00156 Phosphoribosyl transferase domain XFUD_RS00685 PF11692 XFUD_RS00685 XFUD_RS00690 PF00112 Papain family cysteine protease XFUD_RS00710 PF10088 XFUD_RS00710 XFUD_RS00715 PF03372 Endonuclease/Exonuclease/phosphatase family XFUD_RS00720 PF13000 XFUD_RS00720 XFUD_RS00725 PF03702 Uncharacterised protein family (UPF0075) XFUD_RS00730 PF01551 Peptidase family M23 XFUD_RS00730 PF04225 Opacity-associated protein A LysM-like domain XFUD_RS00735 PF00579 tRNA synthetases class I (W and Y) XFUD_RS00735 PF01479 S4 domain XFUD_RS00765 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain XFUD_RS00765 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain XFUD_RS00770 PF01578 XFUD_RS00770 XFUD_RS00775 PF05960 Bacterial protein of unknown function (DUF885) XFUD_RS00780 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS00785 PF00009 Elongation factor Tu GTP binding domain XFUD_RS00785 PF16658 XFUD_RS00785 XFUD_RS00790 PF03006 XFUD_RS00790 XFUD_RS00795 PF00535 Glycosyl transferase family 2 XFUD_RS00800 PF01026 TatD related DNase XFUD_RS00805 PF05433 XFUD_RS00805 XFUD_RS00815 PF01597 Glycine cleavage H-protein XFUD_RS00820 PF01571 Aminomethyltransferase folate-binding domain XFUD_RS00820 PF08669 Glycine cleavage T-protein C-terminal barrel domain XFUD_RS00825 PF01957 NfeD-like C-terminal, partner-binding XFUD_RS00830 PF01145 SPFH domain / Band 7 family XFUD_RS00830 PF16200 XFUD_RS00830 XFUD_RS00835 PF03819 MazG nucleotide pyrophosphohydrolase domain XFUD_RS00840 PF00459 Inositol monophosphatase family XFUD_RS00845 PF00293 NUDIX domain XFUD_RS00850 PF00202 Aminotransferase class-III XFUD_RS00855 PF04452 RNA methyltransferase XFUD_RS00865 PF00270 DEAD/DEAH box helicase XFUD_RS00865 PF00271 Helicase conserved C-terminal domain XFUD_RS00870 PF01242 6-pyruvoyl tetrahydropterin synthase XFUD_RS00885 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) XFUD_RS00890 PF01553 Acyltransferase XFUD_RS00895 PF04367 XFUD_RS00895 XFUD_RS00900 PF13489 Methyltransferase domain XFUD_RS00905 PF03653 XFUD_RS00905 XFUD_RS00910 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit XFUD_RS00915 PF01336 OB-fold nucleic acid binding domain XFUD_RS00915 PF02811 PHP domain XFUD_RS00915 PF07733 Bacterial DNA polymerase III alpha subunit XFUD_RS00915 PF14579 Helix-hairpin-helix motif XFUD_RS00920 PF01259 SAICAR synthetase XFUD_RS00925 PF00226 DnaJ domain XFUD_RS00930 PF00834 Ribulose-phosphate 3 epimerase family XFUD_RS00940 PF00425 chorismate binding enzyme XFUD_RS00940 PF04715 Anthranilate synthase component I, N terminal region XFUD_RS00945 PF00117 Glutamine amidotransferase class-I XFUD_RS00950 PF00591 Glycosyl transferase family, a/b domain XFUD_RS00950 PF02885 Glycosyl transferase family, helical bundle domain XFUD_RS00955 PF00218 Indole-3-glycerol phosphate synthase XFUD_RS00960 PF12710 haloacid dehalogenase-like hydrolase XFUD_RS00965 PF01047 MarR family XFUD_RS00980 PF00557 Metallopeptidase family M24 XFUD_RS00980 PF01321 Creatinase/Prolidase N-terminal domain XFUD_RS00985 PF05960 Bacterial protein of unknown function (DUF885) XFUD_RS00990 PF05960 Bacterial protein of unknown function (DUF885) XFUD_RS00995 PF01702 Queuine tRNA-ribosyltransferase XFUD_RS01000 PF02699 Preprotein translocase subunit XFUD_RS01005 PF02355 Protein export membrane protein XFUD_RS01005 PF07549 SecD/SecF GG Motif XFUD_RS01005 PF13721 SecD export protein N-terminal TM region XFUD_RS01020 PF01743 Poly A polymerase head domain XFUD_RS01020 PF12626 Polymerase A arginine-rich C-terminus XFUD_RS01020 PF12627 Probable RNA and SrmB- binding site of polymerase A XFUD_RS01025 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XFUD_RS01030 PF02548 Ketopantoate hydroxymethyltransferase XFUD_RS01035 PF02569 Pantoate-beta-alanine ligase XFUD_RS01040 PF02261 Aspartate decarboxylase XFUD_RS01045 PF00342 Phosphoglucose isomerase XFUD_RS01060 PF02576 Uncharacterised BCR, YhbC family COG0779 XFUD_RS01065 PF00575 S1 RNA binding domain XFUD_RS01065 PF08529 NusA N-terminal domain XFUD_RS01065 PF13184 NusA-like KH domain XFUD_RS01065 PF14520 Helix-hairpin-helix domain XFUD_RS01070 PF00009 Elongation factor Tu GTP binding domain XFUD_RS01070 PF04760 Translation initiation factor IF-2, N-terminal region XFUD_RS01070 PF08364 XFUD_RS01070 XFUD_RS01070 PF11987 Translation-initiation factor 2 XFUD_RS01075 PF02033 Ribosome-binding factor A XFUD_RS01080 PF01509 TruB family pseudouridylate synthase (N terminal domain) XFUD_RS01080 PF09157 Pseudouridine synthase II TruB, C-terminal XFUD_RS01080 PF16198 XFUD_RS01080 XFUD_RS01085 PF00312 Ribosomal protein S15 XFUD_RS01090 PF00013 KH domain XFUD_RS01090 PF00575 S1 RNA binding domain XFUD_RS01090 PF01138 3' exoribonuclease family, domain 1 XFUD_RS01090 PF03725 3' exoribonuclease family, domain 2 XFUD_RS01090 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain XFUD_RS01095 PF01638 HxlR-like helix-turn-helix XFUD_RS01100 PF05368 NmrA-like family XFUD_RS01115 PF00873 AcrB/AcrD/AcrF family XFUD_RS01120 PF13437 HlyD family secretion protein XFUD_RS01120 PF13533 Biotin-lipoyl like XFUD_RS01140 PF00892 EamA-like transporter family XFUD_RS01145 PF00270 DEAD/DEAH box helicase XFUD_RS01145 PF00271 Helicase conserved C-terminal domain XFUD_RS01145 PF03880 DbpA RNA binding domain XFUD_RS01155 PF00766 Electron transfer flavoprotein FAD-binding domain XFUD_RS01155 PF01012 Electron transfer flavoprotein domain XFUD_RS01160 PF01012 Electron transfer flavoprotein domain XFUD_RS01165 PF16363 XFUD_RS01165 XFUD_RS01170 PF00483 Nucleotidyl transferase XFUD_RS01175 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase XFUD_RS01180 PF04321 RmlD substrate binding domain XFUD_RS01185 PF00483 Nucleotidyl transferase XFUD_RS01185 PF01050 Mannose-6-phosphate isomerase XFUD_RS01190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFUD_RS01190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFUD_RS01190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFUD_RS01190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFUD_RS01225 PF00082 Subtilase family XFUD_RS01225 PF03797 Autotransporter beta-domain XFUD_RS01225 PF12951 XFUD_RS01225 XFUD_RS01230 PF06779 XFUD_RS01230 XFUD_RS01235 PF07273 Protein of unknown function (DUF1439) XFUD_RS01240 PF00365 Phosphofructokinase XFUD_RS01245 PF00406 Adenylate kinase XFUD_RS01250 PF01225 Mur ligase family, catalytic domain XFUD_RS01250 PF02875 Mur ligase family, glutamate ligase domain XFUD_RS01250 PF08245 Mur ligase middle domain XFUD_RS01255 PF01569 PAP2 superfamily XFUD_RS01255 PF09335 XFUD_RS01255 XFUD_RS01255 PF14067 XFUD_RS01255 XFUD_RS01260 PF01636 Phosphotransferase enzyme family XFUD_RS01265 PF00883 Cytosol aminopeptidase family, catalytic domain XFUD_RS01270 PF01594 XFUD_RS01270 XFUD_RS01290 PF13180 PDZ domain XFUD_RS01290 PF13365 Trypsin-like peptidase domain XFUD_RS01295 PF01370 NAD dependent epimerase/dehydratase family XFUD_RS01295 PF08338 Domain of unknown function (DUF1731) XFUD_RS01300 PF00501 AMP-binding enzyme XFUD_RS01300 PF13193 AMP-binding enzyme C-terminal domain XFUD_RS01310 PF00330 Aconitase family (aconitate hydratase) XFUD_RS01310 PF00694 Aconitase C-terminal domain XFUD_RS01315 PF04014 Antidote-toxin recognition MazE XFUD_RS01320 PF01850 PIN domain XFUD_RS01325 PF00330 Aconitase family (aconitate hydratase) XFUD_RS01325 PF06434 Aconitate hydratase 2 N-terminus XFUD_RS01325 PF11791 Aconitate B N-terminal domain XFUD_RS01335 PF01863 Protein of unknown function DUF45 XFUD_RS01350 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFUD_RS01350 PF04851 Type III restriction enzyme, res subunit XFUD_RS01355 PF01420 Type I restriction modification DNA specificity domain XFUD_RS01385 PF00121 Triosephosphate isomerase XFUD_RS01390 PF03840 Preprotein translocase SecG subunit XFUD_RS01400 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 XFUD_RS01405 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit XFUD_RS01410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit XFUD_RS01415 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit XFUD_RS01420 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin XFUD_RS01425 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit XFUD_RS01425 PF10531 SLBB domain XFUD_RS01425 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XFUD_RS01430 PF00384 Molybdopterin oxidoreductase XFUD_RS01430 PF01568 Molydopterin dinucleotide binding domain XFUD_RS01430 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XFUD_RS01430 PF13510 2Fe-2S iron-sulfur cluster binding domain XFUD_RS01435 PF00146 NADH dehydrogenase XFUD_RS01440 PF12838 4Fe-4S dicluster domain XFUD_RS01445 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 XFUD_RS01450 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L XFUD_RS01455 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFUD_RS01455 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus XFUD_RS01460 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFUD_RS01465 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains XFUD_RS01470 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS01475 PF03600 Citrate transporter XFUD_RS01480 PF07396 Phosphate-selective porin O and P XFUD_RS01485 PF00072 Response regulator receiver domain XFUD_RS01485 PF00486 Transcriptional regulatory protein, C terminal XFUD_RS01490 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS01490 PF08521 XFUD_RS01490 XFUD_RS01495 PF13531 Bacterial extracellular solute-binding protein XFUD_RS01505 PF12323 XFUD_RS01505 XFUD_RS01510 PF01385 XFUD_RS01510 XFUD_RS01510 PF07282 XFUD_RS01510 XFUD_RS01545 PF07120 XFUD_RS01545 XFUD_RS01550 PF02590 Predicted SPOUT methyltransferase XFUD_RS01555 PF00593 TonB dependent receptor XFUD_RS01555 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS01560 PF02600 Disulfide bond formation protein DsbB XFUD_RS01570 PF00691 OmpA family XFUD_RS01570 PF13505 Outer membrane protein beta-barrel domain XFUD_RS01580 PF01565 FAD binding domain XFUD_RS01580 PF02913 FAD linked oxidases, C-terminal domain XFUD_RS01585 PF02824 TGS domain XFUD_RS01585 PF04607 Region found in RelA / SpoT proteins XFUD_RS01585 PF13291 ACT domain XFUD_RS01585 PF13328 HD domain XFUD_RS01590 PF01042 Endoribonuclease L-PSP XFUD_RS01595 PF00270 DEAD/DEAH box helicase XFUD_RS01595 PF00271 Helicase conserved C-terminal domain XFUD_RS01595 PF17191 XFUD_RS01595 XFUD_RS01600 PF00067 Cytochrome P450 XFUD_RS01605 PF03583 Secretory lipase XFUD_RS01610 PF03583 Secretory lipase XFUD_RS01615 PF00772 DnaB-like helicase N terminal domain XFUD_RS01615 PF03796 DnaB-like helicase C terminal domain XFUD_RS01625 PF00691 OmpA family XFUD_RS01625 PF13488 XFUD_RS01625 XFUD_RS01630 PF00294 pfkB family carbohydrate kinase XFUD_RS01635 PF00248 Aldo/keto reductase family XFUD_RS01640 PF00905 Penicillin binding protein transpeptidase domain XFUD_RS01640 PF00912 Transglycosylase XFUD_RS01640 PF17092 XFUD_RS01640 XFUD_RS01645 PF11104 Type IV pilus assembly protein PilM; XFUD_RS01650 PF05137 XFUD_RS01650 XFUD_RS01655 PF04350 Pilus assembly protein, PilO XFUD_RS01660 PF04351 Pilus assembly protein, PilP XFUD_RS01665 PF00263 XFUD_RS01665 XFUD_RS01665 PF03958 Bacterial type II/III secretion system short domain XFUD_RS01665 PF07660 Secretin and TonB N terminus short domain XFUD_RS01670 PF01569 PAP2 superfamily XFUD_RS01675 PF00884 Sulfatase XFUD_RS01675 PF08019 XFUD_RS01675 XFUD_RS01680 PF00067 Cytochrome P450 XFUD_RS01685 PF02581 Thiamine monophosphate synthase/TENI XFUD_RS01690 PF00301 Rubredoxin XFUD_RS01695 PF00004 ATPase family associated with various cellular activities (AAA) XFUD_RS01695 PF02861 Clp amino terminal domain XFUD_RS01695 PF07724 AAA domain (Cdc48 subfamily) XFUD_RS01695 PF10431 C-terminal, D2-small domain, of ClpB protein XFUD_RS01700 PF17067 XFUD_RS01700 XFUD_RS01705 PF03203 XFUD_RS01705 XFUD_RS01710 PF00593 TonB dependent receptor XFUD_RS01710 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS01715 PF01207 Dihydrouridine synthase (Dus) XFUD_RS01725 PF00072 Response regulator receiver domain XFUD_RS01725 PF00486 Transcriptional regulatory protein, C terminal XFUD_RS01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS01740 PF00438 S-adenosylmethionine synthetase, N-terminal domain XFUD_RS01740 PF02772 S-adenosylmethionine synthetase, central domain XFUD_RS01740 PF02773 S-adenosylmethionine synthetase, C-terminal domain XFUD_RS01755 PF00293 NUDIX domain XFUD_RS01760 PF04324 BFD-like [2Fe-2S] binding domain XFUD_RS01765 PF00210 Ferritin-like domain XFUD_RS01770 PF01627 Hpt domain XFUD_RS01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS01800 PF00072 Response regulator receiver domain XFUD_RS01800 PF00563 EAL domain XFUD_RS01800 PF00990 GGDEF domain XFUD_RS01810 PF04519 XFUD_RS01810 XFUD_RS01815 PF01521 Iron-sulphur cluster biosynthesis XFUD_RS01820 PF03741 XFUD_RS01820 XFUD_RS01825 PF10672 S-adenosylmethionine-dependent methyltransferase XFUD_RS01830 PF13520 Amino acid permease XFUD_RS01835 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS01840 PF00005 ABC transporter XFUD_RS01840 PF09821 XFUD_RS01840 XFUD_RS01845 PF02646 XFUD_RS01845 XFUD_RS01855 PF04333 XFUD_RS01855 XFUD_RS01860 PF13466 STAS domain XFUD_RS01865 PF05494 Toluene tolerance, Ttg2 XFUD_RS01870 PF02470 XFUD_RS01870 XFUD_RS01875 PF02405 XFUD_RS01875 XFUD_RS01880 PF00005 ABC transporter XFUD_RS01890 PF00580 UvrD/REP helicase N-terminal domain XFUD_RS01890 PF12705 PD-(D/E)XK nuclease superfamily XFUD_RS01890 PF13361 UvrD-like helicase C-terminal domain XFUD_RS01900 PF13538 UvrD-like helicase C-terminal domain XFUD_RS01900 PF13604 AAA domain XFUD_RS01910 PF00579 tRNA synthetases class I (W and Y) XFUD_RS01915 PF01807 CHC2 zinc finger XFUD_RS01915 PF08275 DNA primase catalytic core, N-terminal domain XFUD_RS01915 PF08278 DNA primase DnaG DnaB-binding XFUD_RS01915 PF10410 DnaB-helicase binding domain of primase XFUD_RS01915 PF13155 Toprim-like XFUD_RS01920 PF03631 XFUD_RS01920 XFUD_RS01925 PF09424 Yqey-like protein XFUD_RS01930 PF01165 Ribosomal protein S21 XFUD_RS01935 PF00814 Glycoprotease family XFUD_RS01940 PF02152 Dihydroneopterin aldolase XFUD_RS01945 PF00924 Mechanosensitive ion channel XFUD_RS01950 PF00933 Glycosyl hydrolase family 3 N terminal domain XFUD_RS01950 PF01915 Glycosyl hydrolase family 3 C-terminal domain XFUD_RS01950 PF14310 Fibronectin type III-like domain XFUD_RS01955 PF13673 Acetyltransferase (GNAT) domain XFUD_RS01965 PF01066 CDP-alcohol phosphatidyltransferase XFUD_RS01970 PF13511 XFUD_RS01970 XFUD_RS01975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFUD_RS01975 PF03129 Anticodon binding domain XFUD_RS01975 PF04073 Aminoacyl-tRNA editing domain XFUD_RS01980 PF00816 H-NS histone family XFUD_RS01990 PF04342 XFUD_RS01990 XFUD_RS01995 PF00072 Response regulator receiver domain XFUD_RS02000 PF00107 Zinc-binding dehydrogenase XFUD_RS02005 PF01145 SPFH domain / Band 7 family XFUD_RS02010 PF01145 SPFH domain / Band 7 family XFUD_RS02015 PF09838 XFUD_RS02015 XFUD_RS02020 PF00709 Adenylosuccinate synthetase XFUD_RS02025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XFUD_RS02025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain XFUD_RS02030 PF00334 Nucleoside diphosphate kinase XFUD_RS02035 PF04055 Radical SAM superfamily XFUD_RS02040 PF13181 Tetratricopeptide repeat XFUD_RS02050 PF09976 Tetratricopeptide repeat XFUD_RS02055 PF01011 PQQ enzyme repeat XFUD_RS02055 PF13360 PQQ-like domain XFUD_RS02060 PF01926 50S ribosome-binding GTPase XFUD_RS02060 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal XFUD_RS02065 PF00581 Rhodanese-like domain XFUD_RS02065 PF00899 ThiF family XFUD_RS02080 PF00563 EAL domain XFUD_RS02080 PF12792 XFUD_RS02080 XFUD_RS02090 PF12019 Type II transport protein GspH XFUD_RS02090 PF13633 Prokaryotic N-terminal methylation site XFUD_RS02100 PF16074 XFUD_RS02100 XFUD_RS02105 PF14341 XFUD_RS02105 XFUD_RS02110 PF05567 Neisseria PilC beta-propeller domain XFUD_RS02115 PF16732 XFUD_RS02115 XFUD_RS02135 PF00436 Single-strand binding protein family XFUD_RS02140 PF07505 XFUD_RS02140 XFUD_RS02155 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS02160 PF00114 Pilin (bacterial filament) XFUD_RS02185 PF07603 XFUD_RS02185 XFUD_RS02210 PF06114 Domain of unknown function (DUF955) XFUD_RS02215 PF14367 XFUD_RS02215 XFUD_RS02230 PF15943 XFUD_RS02230 XFUD_RS02250 PF01807 CHC2 zinc finger XFUD_RS02255 PF05272 XFUD_RS02255 XFUD_RS02265 PF05876 XFUD_RS02265 XFUD_RS02280 PF05136 XFUD_RS02280 XFUD_RS02285 PF00574 Clp protease XFUD_RS02290 PF09956 XFUD_RS02290 XFUD_RS02300 PF00959 Phage lysozyme XFUD_RS02345 PF09356 XFUD_RS02345 XFUD_RS02345 PF09931 XFUD_RS02345 XFUD_RS02360 PF13550 XFUD_RS02360 XFUD_RS02390 PF14384 XFUD_RS02390 XFUD_RS02395 PF04365 Protein of unknown function (DUF497) XFUD_RS02400 PF01381 Helix-turn-helix XFUD_RS02405 PF05016 Plasmid stabilisation system protein XFUD_RS02415 PF12323 XFUD_RS02415 XFUD_RS02425 PF13274 XFUD_RS02425 XFUD_RS02430 PF00114 Pilin (bacterial filament) XFUD_RS02430 PF13633 Prokaryotic N-terminal methylation site XFUD_RS02435 PF00114 Pilin (bacterial filament) XFUD_RS02435 PF13633 Prokaryotic N-terminal methylation site XFUD_RS02470 PF04060 Putative Fe-S cluster XFUD_RS02470 PF14697 4Fe-4S dicluster domain XFUD_RS02475 PF01588 Putative tRNA binding domain XFUD_RS02475 PF09334 tRNA synthetases class I (M) XFUD_RS02480 PF00593 TonB dependent receptor XFUD_RS02480 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS02485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases XFUD_RS02490 PF04348 LppC putative lipoprotein XFUD_RS02495 PF02021 Uncharacterised protein family UPF0102 XFUD_RS02500 PF03193 Protein of unknown function, DUF258 XFUD_RS02505 PF00127 Copper binding proteins, plastocyanin/azurin family XFUD_RS02520 PF00117 Glutamine amidotransferase class-I XFUD_RS02530 PF00902 Sec-independent protein translocase protein (TatC) XFUD_RS02535 PF02416 mttA/Hcf106 family XFUD_RS02540 PF02416 mttA/Hcf106 family XFUD_RS02545 PF04366 XFUD_RS02545 XFUD_RS02550 PF00762 Ferrochelatase XFUD_RS02555 PF01863 Protein of unknown function DUF45 XFUD_RS02560 PF04381 Putative exonuclease, RdgC XFUD_RS02565 PF01171 PP-loop family XFUD_RS02575 PF07977 FabA-like domain XFUD_RS02595 PF01431 Peptidase family M13 XFUD_RS02595 PF05649 Peptidase family M13 XFUD_RS02605 PF02223 Thymidylate kinase XFUD_RS02615 PF11306 Protein of unknown function (DUF3108) XFUD_RS02620 PF11306 Protein of unknown function (DUF3108) XFUD_RS02625 PF00551 Formyl transferase XFUD_RS02635 PF00586 AIR synthase related protein, N-terminal domain XFUD_RS02635 PF02769 AIR synthase related protein, C-terminal domain XFUD_RS02640 PF09839 XFUD_RS02640 XFUD_RS02645 PF01594 XFUD_RS02645 XFUD_RS02650 PF01695 IstB-like ATP binding protein XFUD_RS02655 PF00483 Nucleotidyl transferase XFUD_RS02660 PF01636 Phosphotransferase enzyme family XFUD_RS02665 PF12836 Helix-hairpin-helix motif XFUD_RS02670 PF02424 ApbE family XFUD_RS02675 PF10670 XFUD_RS02675 XFUD_RS02680 PF10029 XFUD_RS02680 XFUD_RS02685 PF16357 XFUD_RS02685 XFUD_RS02690 PF13640 2OG-Fe(II) oxygenase superfamily XFUD_RS02695 PF00593 TonB dependent receptor XFUD_RS02695 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS02700 PF14346 Domain of unknown function (DUF4398) XFUD_RS02710 PF04325 Protein of unknown function (DUF465) XFUD_RS02715 PF00291 Pyridoxal-phosphate dependent enzyme XFUD_RS02715 PF00571 CBS domain XFUD_RS02720 PF05050 Methyltransferase FkbM domain XFUD_RS02725 PF00534 Glycosyl transferases group 1 XFUD_RS02725 PF13439 Glycosyltransferase Family 4 XFUD_RS02730 PF16363 XFUD_RS02730 XFUD_RS02735 PF16363 XFUD_RS02735 XFUD_RS02740 PF16363 XFUD_RS02740 XFUD_RS02745 PF00535 Glycosyl transferase family 2 XFUD_RS02750 PF04138 XFUD_RS02750 XFUD_RS02765 PF00118 TCP-1/cpn60 chaperonin family XFUD_RS02770 PF00166 Chaperonin 10 Kd subunit XFUD_RS02775 PF03091 CutA1 divalent ion tolerance protein XFUD_RS02780 PF11412 Disulphide bond corrector protein DsbC XFUD_RS02780 PF13899 Thioredoxin-like XFUD_RS02785 PF08543 Phosphomethylpyrimidine kinase XFUD_RS02795 PF01488 Shikimate / quinate 5-dehydrogenase XFUD_RS02795 PF08501 Shikimate dehydrogenase substrate binding domain XFUD_RS02820 PF10137 XFUD_RS02820 XFUD_RS02825 PF10083 XFUD_RS02825 XFUD_RS02830 PF00589 Phage integrase family XFUD_RS02830 PF13356 Domain of unknown function (DUF4102) XFUD_RS02835 PF12728 Helix-turn-helix domain XFUD_RS02840 PF13481 AAA domain XFUD_RS02880 PF12183 Restriction endonuclease NotI XFUD_RS02885 PF01555 DNA methylase XFUD_RS02895 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFUD_RS02895 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XFUD_RS02905 PF00633 Helix-hairpin-helix motif XFUD_RS02905 PF00730 HhH-GPD superfamily base excision DNA repair protein XFUD_RS02905 PF10576 Iron-sulfur binding domain of endonuclease III XFUD_RS02915 PF01694 Rhomboid family XFUD_RS02920 PF04235 XFUD_RS02920 XFUD_RS02925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFUD_RS02930 PF00877 NlpC/P60 family XFUD_RS02935 PF00877 NlpC/P60 family XFUD_RS02945 PF00375 Sodium:dicarboxylate symporter family XFUD_RS02950 PF00245 Alkaline phosphatase XFUD_RS02955 PF01171 PP-loop family XFUD_RS02955 PF09179 TilS substrate binding domain XFUD_RS02955 PF11734 TilS substrate C-terminal domain XFUD_RS02960 PF02609 Exonuclease VII small subunit XFUD_RS02965 PF00348 Polyprenyl synthetase XFUD_RS03000 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFUD_RS03000 PF06594 XFUD_RS03000 XFUD_RS03010 PF00456 Transketolase, thiamine diphosphate binding domain XFUD_RS03020 PF00698 Acyl transferase domain XFUD_RS03025 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS03030 PF00550 Phosphopantetheine attachment site XFUD_RS03035 PF00109 Beta-ketoacyl synthase, N-terminal domain XFUD_RS03035 PF02801 Beta-ketoacyl synthase, C-terminal domain XFUD_RS03040 PF00425 chorismate binding enzyme XFUD_RS03040 PF04715 Anthranilate synthase component I, N terminal region XFUD_RS03045 PF02618 YceG-like family XFUD_RS03050 PF13177 DNA polymerase III, delta subunit XFUD_RS03055 PF07238 PilZ domain XFUD_RS03065 PF00589 Phage integrase family XFUD_RS03080 PF00176 SNF2 family N-terminal domain XFUD_RS03090 PF08774 VRR-NUC domain XFUD_RS03095 PF00476 DNA polymerase family A XFUD_RS03100 PF02498 XFUD_RS03100 XFUD_RS03105 PF10991 Protein of unknown function (DUF2815) XFUD_RS03110 PF10926 XFUD_RS03110 XFUD_RS03155 PF00717 Peptidase S24-like XFUD_RS03155 PF01381 Helix-turn-helix XFUD_RS03200 PF02498 XFUD_RS03200 XFUD_RS03205 PF03288 Poxvirus D5 protein-like XFUD_RS03205 PF08706 XFUD_RS03205 XFUD_RS03220 PF00959 Phage lysozyme XFUD_RS03225 PF16083 XFUD_RS03225 XFUD_RS03240 PF07471 Phage DNA packaging protein Nu1 XFUD_RS03245 PF05876 XFUD_RS03245 XFUD_RS03255 PF05136 XFUD_RS03255 XFUD_RS03260 PF04586 XFUD_RS03260 XFUD_RS03260 PF05065 Phage capsid family XFUD_RS03285 PF04717 Phage-related baseplate assembly protein XFUD_RS03290 PF01381 Helix-turn-helix XFUD_RS03295 PF05015 Plasmid maintenance system killer protein XFUD_RS03300 PF04965 Gene 25-like lysozyme XFUD_RS03305 PF04865 XFUD_RS03305 XFUD_RS03310 PF09684 XFUD_RS03310 XFUD_RS03320 PF04984 Phage tail sheath protein XFUD_RS03325 PF04985 XFUD_RS03325 XFUD_RS03330 PF10109 XFUD_RS03330 XFUD_RS03335 PF10145 XFUD_RS03335 XFUD_RS03340 PF06995 XFUD_RS03340 XFUD_RS03345 PF05489 Phage Tail Protein X XFUD_RS03350 PF05954 Phage late control gene D protein (GPD) XFUD_RS03360 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFUD_RS03360 PF02824 TGS domain XFUD_RS03360 PF03129 Anticodon binding domain XFUD_RS03360 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain XFUD_RS03365 PF00707 Translation initiation factor IF-3, C-terminal domain XFUD_RS03365 PF05198 Translation initiation factor IF-3, N-terminal domain XFUD_RS03370 PF01632 Ribosomal protein L35 XFUD_RS03375 PF00453 Ribosomal protein L20 XFUD_RS03380 PF01409 tRNA synthetases class II core domain (F) XFUD_RS03380 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain XFUD_RS03385 PF01588 Putative tRNA binding domain XFUD_RS03385 PF03147 Ferredoxin-fold anticodon binding domain XFUD_RS03385 PF03483 B3/4 domain XFUD_RS03385 PF03484 tRNA synthetase B5 domain XFUD_RS03390 PF00216 Bacterial DNA-binding protein XFUD_RS03395 PF13411 MerR HTH family regulatory protein XFUD_RS03410 PF01728 FtsJ-like methyltransferase XFUD_RS03415 PF00816 H-NS histone family XFUD_RS03420 PF00570 HRDC domain XFUD_RS03420 PF01612 3'-5' exonuclease XFUD_RS03425 PF03781 Sulfatase-modifying factor enzyme 1 XFUD_RS03430 PF06057 Bacterial virulence protein (VirJ) XFUD_RS03435 PF02601 XFUD_RS03435 XFUD_RS03435 PF13742 XFUD_RS03435 XFUD_RS03440 PF01256 Carbohydrate kinase XFUD_RS03440 PF03853 YjeF-related protein N-terminus XFUD_RS03445 PF02367 Uncharacterised P-loop hydrolase UPF0079 XFUD_RS03455 PF01119 DNA mismatch repair protein, C-terminal domain XFUD_RS03455 PF08676 MutL C terminal dimerisation domain XFUD_RS03455 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS03460 PF07920 Protein of unknown function (DUF1684) XFUD_RS03465 PF00692 dUTPase XFUD_RS03470 PF01925 XFUD_RS03470 XFUD_RS03480 PF04143 XFUD_RS03480 XFUD_RS03485 PF12840 Helix-turn-helix domain XFUD_RS03490 PF00753 Metallo-beta-lactamase superfamily XFUD_RS03490 PF04273 Putative phosphatase (DUF442) XFUD_RS03505 PF00550 Phosphopantetheine attachment site XFUD_RS03520 PF03279 XFUD_RS03520 XFUD_RS03530 PF03176 MMPL family XFUD_RS03540 PF01757 XFUD_RS03540 XFUD_RS03560 PF00657 GDSL-like Lipase/Acylhydrolase XFUD_RS03560 PF03797 Autotransporter beta-domain XFUD_RS03565 PF02597 ThiS family XFUD_RS03570 PF05690 Thiazole biosynthesis protein ThiG XFUD_RS03575 PF02390 Putative methyltransferase XFUD_RS03595 PF02381 MraZ protein XFUD_RS03600 PF01795 MraW methylase family XFUD_RS03605 PF04999 XFUD_RS03605 XFUD_RS03610 PF00905 Penicillin binding protein transpeptidase domain XFUD_RS03610 PF03717 Penicillin-binding Protein dimerisation domain XFUD_RS03615 PF01225 Mur ligase family, catalytic domain XFUD_RS03615 PF02875 Mur ligase family, glutamate ligase domain XFUD_RS03615 PF08245 Mur ligase middle domain XFUD_RS03620 PF01225 Mur ligase family, catalytic domain XFUD_RS03620 PF02875 Mur ligase family, glutamate ligase domain XFUD_RS03620 PF08245 Mur ligase middle domain XFUD_RS03625 PF00953 Glycosyl transferase family 4 XFUD_RS03630 PF01098 XFUD_RS03630 XFUD_RS03635 PF03033 Glycosyltransferase family 28 N-terminal domain XFUD_RS03635 PF04101 Glycosyltransferase family 28 C-terminal domain XFUD_RS03640 PF01225 Mur ligase family, catalytic domain XFUD_RS03640 PF02875 Mur ligase family, glutamate ligase domain XFUD_RS03640 PF08245 Mur ligase middle domain XFUD_RS03645 PF01820 D-ala D-ala ligase N-terminus XFUD_RS03645 PF07478 D-ala D-ala ligase C-terminus XFUD_RS03650 PF03799 Cell division protein FtsQ XFUD_RS03650 PF08478 POTRA domain, FtsQ-type XFUD_RS03655 PF02491 SHS2 domain inserted in FTSA XFUD_RS03655 PF14450 Cell division protein FtsA XFUD_RS03660 PF00091 Tubulin/FtsZ family, GTPase domain XFUD_RS03660 PF12327 FtsZ family, C-terminal domain XFUD_RS03670 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase XFUD_RS03675 PF05258 XFUD_RS03675 XFUD_RS03680 PF01551 Peptidase family M23 XFUD_RS03685 PF01043 SecA preprotein cross-linking domain XFUD_RS03685 PF02810 SEC-C motif XFUD_RS03685 PF07516 SecA Wing and Scaffold domain XFUD_RS03685 PF07517 SecA DEAD-like domain XFUD_RS03690 PF00150 Cellulase (glycosyl hydrolase family 5) XFUD_RS03690 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XFUD_RS03700 PF09849 XFUD_RS03700 XFUD_RS03705 PF00675 Insulinase (Peptidase family M16) XFUD_RS03705 PF05193 Peptidase M16 inactive domain XFUD_RS03715 PF00150 Cellulase (glycosyl hydrolase family 5) XFUD_RS03715 PF00553 Cellulose binding domain XFUD_RS03720 PF02225 PA domain XFUD_RS03720 PF04389 Peptidase family M28 XFUD_RS03725 PF01475 Ferric uptake regulator family XFUD_RS03730 PF00749 tRNA synthetases class I (E and Q), catalytic domain XFUD_RS03735 PF00162 Phosphoglycerate kinase XFUD_RS03745 PF00224 Pyruvate kinase, barrel domain XFUD_RS03745 PF02887 Pyruvate kinase, alpha/beta domain XFUD_RS03755 PF00274 Fructose-bisphosphate aldolase class-I XFUD_RS03775 PF00291 Pyridoxal-phosphate dependent enzyme XFUD_RS03785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS03785 PF03466 LysR substrate binding domain XFUD_RS03790 PF01494 FAD binding domain XFUD_RS03795 PF01494 FAD binding domain XFUD_RS03805 PF04453 Organic solvent tolerance protein XFUD_RS03810 PF00639 PPIC-type PPIASE domain XFUD_RS03810 PF09312 SurA N-terminal domain XFUD_RS03815 PF04166 Pyridoxal phosphate biosynthetic protein PdxA XFUD_RS03820 PF01301 Glycosyl hydrolases family 35 XFUD_RS03825 PF07971 Glycosyl hydrolase family 92 XFUD_RS03830 PF06824 Protein of unknown function (DUF1237) XFUD_RS03840 PF00933 Glycosyl hydrolase family 3 N terminal domain XFUD_RS03840 PF01915 Glycosyl hydrolase family 3 C-terminal domain XFUD_RS03840 PF07691 PA14 domain XFUD_RS03840 PF14310 Fibronectin type III-like domain XFUD_RS03845 PF00703 Glycosyl hydrolases family 2 XFUD_RS03850 PF00728 Glycosyl hydrolase family 20, catalytic domain XFUD_RS03850 PF02838 Glycosyl hydrolase family 20, domain 2 XFUD_RS03850 PF13290 XFUD_RS03850 XFUD_RS03855 PF00704 Glycosyl hydrolases family 18 XFUD_RS03860 PF01641 SelR domain XFUD_RS03865 PF01266 FAD dependent oxidoreductase XFUD_RS03870 PF00842 Alanine racemase, C-terminal domain XFUD_RS03870 PF01168 Alanine racemase, N-terminal domain XFUD_RS03880 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS03880 PF08448 PAS fold XFUD_RS03890 PF01476 LysM domain XFUD_RS03890 PF01551 Peptidase family M23 XFUD_RS03895 PF09335 XFUD_RS03895 XFUD_RS03900 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XFUD_RS03905 PF01975 Survival protein SurE XFUD_RS03925 PF01551 Peptidase family M23 XFUD_RS03930 PF00561 alpha/beta hydrolase fold XFUD_RS03935 PF01053 Cys/Met metabolism PLP-dependent enzyme XFUD_RS03940 PF01545 Cation efflux family XFUD_RS03955 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XFUD_RS03955 PF00364 Biotin-requiring enzyme XFUD_RS03955 PF02817 e3 binding domain XFUD_RS03965 PF03922 OmpW family XFUD_RS03970 PF03180 NLPA lipoprotein XFUD_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS03980 PF00005 ABC transporter XFUD_RS03980 PF09383 NIL domain XFUD_RS03995 PF01522 Polysaccharide deacetylase XFUD_RS04000 PF13439 Glycosyltransferase Family 4 XFUD_RS04000 PF13692 Glycosyl transferases group 1 XFUD_RS04005 PF00484 Carbonic anhydrase XFUD_RS04010 PF02557 D-alanyl-D-alanine carboxypeptidase XFUD_RS04015 PF00270 DEAD/DEAH box helicase XFUD_RS04015 PF13307 Helicase C-terminal domain XFUD_RS04025 PF00905 Penicillin binding protein transpeptidase domain XFUD_RS04025 PF00912 Transglycosylase XFUD_RS04025 PF14814 Bifunctional transglycosylase second domain XFUD_RS04030 PF13692 Glycosyl transferases group 1 XFUD_RS04040 PF00534 Glycosyl transferases group 1 XFUD_RS04040 PF13439 Glycosyltransferase Family 4 XFUD_RS04050 PF05590 XFUD_RS04050 XFUD_RS04070 PF05590 XFUD_RS04070 XFUD_RS04080 PF05590 XFUD_RS04080 XFUD_RS04090 PF05590 XFUD_RS04090 XFUD_RS04100 PF05590 XFUD_RS04100 XFUD_RS04105 PF13332 XFUD_RS04105 XFUD_RS04120 PF01544 CorA-like Mg2+ transporter protein XFUD_RS04125 PF13387 XFUD_RS04125 XFUD_RS04130 PF00571 CBS domain XFUD_RS04130 PF03471 Transporter associated domain XFUD_RS04140 PF02130 Uncharacterized protein family UPF0054 XFUD_RS04145 PF02562 PhoH-like protein XFUD_RS04150 PF00919 Uncharacterized protein family UPF0004 XFUD_RS04150 PF01938 TRAM domain XFUD_RS04150 PF04055 Radical SAM superfamily XFUD_RS04155 PF01464 Transglycosylase SLT domain XFUD_RS04160 PF00355 Rieske [2Fe-2S] domain XFUD_RS04160 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal XFUD_RS04165 PF00032 Cytochrome b(C-terminal)/b6/petD XFUD_RS04165 PF00033 Cytochrome b(N-terminal)/b6/petB XFUD_RS04170 PF02167 Cytochrome C1 family XFUD_RS04180 PF04386 Stringent starvation protein B XFUD_RS04185 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS04190 PF01381 Helix-turn-helix XFUD_RS04210 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS04215 PF01300 Telomere recombination XFUD_RS04220 PF01131 DNA topoisomerase XFUD_RS04220 PF01751 Toprim domain XFUD_RS04220 PF13368 XFUD_RS04220 XFUD_RS04225 PF04361 XFUD_RS04225 XFUD_RS04230 PF02481 DNA recombination-mediator protein A XFUD_RS04235 PF01476 LysM domain XFUD_RS04240 PF01327 Polypeptide deformylase XFUD_RS04245 PF00551 Formyl transferase XFUD_RS04245 PF02911 Formyl transferase, C-terminal domain XFUD_RS04250 PF01029 NusB family XFUD_RS04250 PF01189 NOL1/NOP2/sun family XFUD_RS04255 PF13231 XFUD_RS04255 XFUD_RS04265 PF04023 FeoA domain XFUD_RS04270 PF02421 Ferrous iron transport protein B XFUD_RS04270 PF07664 XFUD_RS04270 XFUD_RS04270 PF07670 Nucleoside recognition XFUD_RS04280 PF02086 D12 class N6 adenine-specific DNA methyltransferase XFUD_RS04285 PF09566 XFUD_RS04285 XFUD_RS04290 PF13525 Outer membrane lipoprotein XFUD_RS04295 PF00849 RNA pseudouridylate synthase XFUD_RS04295 PF01479 S4 domain XFUD_RS04300 PF02578 Multi-copper polyphenol oxidoreductase laccase XFUD_RS04305 PF04134 XFUD_RS04305 XFUD_RS04310 PF06039 XFUD_RS04310 XFUD_RS04315 PF00005 ABC transporter XFUD_RS04315 PF12848 ABC transporter XFUD_RS04320 PF00464 Serine hydroxymethyltransferase XFUD_RS04330 PF03477 ATP cone domain XFUD_RS04335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XFUD_RS04335 PF01872 RibD C-terminal domain XFUD_RS04340 PF00677 Lumazine binding domain XFUD_RS04345 PF00925 GTP cyclohydrolase II XFUD_RS04345 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase XFUD_RS04350 PF00885 6,7-dimethyl-8-ribityllumazine synthase XFUD_RS04355 PF01029 NusB family XFUD_RS04360 PF00586 AIR synthase related protein, N-terminal domain XFUD_RS04360 PF02769 AIR synthase related protein, C-terminal domain XFUD_RS04380 PF00578 AhpC/TSA family XFUD_RS04385 PF13740 ACT domain XFUD_RS04390 PF00701 Dihydrodipicolinate synthetase family XFUD_RS04405 PF00271 Helicase conserved C-terminal domain XFUD_RS04405 PF02151 UvrB/uvrC motif XFUD_RS04405 PF04851 Type III restriction enzyme, res subunit XFUD_RS04405 PF12344 Ultra-violet resistance protein B XFUD_RS04435 PF00072 Response regulator receiver domain XFUD_RS04435 PF00196 Bacterial regulatory proteins, luxR family XFUD_RS04450 PF07396 Phosphate-selective porin O and P XFUD_RS04455 PF00375 Sodium:dicarboxylate symporter family XFUD_RS04460 PF00390 Malic enzyme, N-terminal domain XFUD_RS04460 PF01515 Phosphate acetyl/butaryl transferase XFUD_RS04460 PF03949 Malic enzyme, NAD binding domain XFUD_RS04465 PF00183 Hsp90 protein XFUD_RS04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS04470 PF03602 Conserved hypothetical protein 95 XFUD_RS04475 PF01467 Cytidylyltransferase XFUD_RS04485 PF00037 4Fe-4S binding domain XFUD_RS04490 PF01019 Gamma-glutamyltranspeptidase XFUD_RS04495 PF00990 GGDEF domain XFUD_RS04495 PF07695 XFUD_RS04495 XFUD_RS04495 PF07696 7TMR-DISM extracellular 2 XFUD_RS04500 PF01551 Peptidase family M23 XFUD_RS04505 PF01979 Amidohydrolase family XFUD_RS04510 PF01809 XFUD_RS04510 XFUD_RS04515 PF01258 Prokaryotic dksA/traR C4-type zinc finger XFUD_RS04520 PF12146 Putative lysophospholipase XFUD_RS04525 PF05977 Transmembrane secretion effector XFUD_RS04530 PF02657 Fe-S metabolism associated domain XFUD_RS04535 PF01406 tRNA synthetases class I (C) catalytic domain XFUD_RS04535 PF09190 DALR domain XFUD_RS04550 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XFUD_RS04550 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XFUD_RS04555 PF00764 Arginosuccinate synthase XFUD_RS04560 PF01546 Peptidase family M20/M25/M40 XFUD_RS04560 PF07687 Peptidase dimerisation domain XFUD_RS04565 PF00696 Amino acid kinase family XFUD_RS04565 PF04768 Protein of unknown function (DUF619) XFUD_RS04575 PF00206 Lyase XFUD_RS04580 PF00696 Amino acid kinase family XFUD_RS04580 PF01472 PUA domain XFUD_RS04585 PF00171 Aldehyde dehydrogenase family XFUD_RS04615 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFUD_RS04615 PF06594 XFUD_RS04615 XFUD_RS04620 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region XFUD_RS04625 PF01325 Iron dependent repressor, N-terminal DNA binding domain XFUD_RS04625 PF02742 Iron dependent repressor, metal binding and dimerisation domain XFUD_RS04630 PF01566 XFUD_RS04630 XFUD_RS04640 PF04376 XFUD_RS04640 XFUD_RS04640 PF04377 XFUD_RS04640 XFUD_RS04650 PF13622 Thioesterase-like superfamily XFUD_RS04660 PF00082 Subtilase family XFUD_RS04660 PF03797 Autotransporter beta-domain XFUD_RS04660 PF12951 XFUD_RS04660 XFUD_RS04680 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XFUD_RS04680 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain XFUD_RS04685 PF01553 Acyltransferase XFUD_RS04705 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain XFUD_RS04705 PF05221 S-adenosyl-L-homocysteine hydrolase XFUD_RS04710 PF00501 AMP-binding enzyme XFUD_RS04715 PF01351 Ribonuclease HII XFUD_RS04720 PF02684 XFUD_RS04720 XFUD_RS04725 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS04725 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 XFUD_RS04730 PF07977 FabA-like domain XFUD_RS04735 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS04735 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD XFUD_RS04735 PF14602 Hexapeptide repeat of succinyl-transferase XFUD_RS04740 PF01103 Surface antigen XFUD_RS04740 PF07244 Surface antigen variable number repeat XFUD_RS04745 PF02163 Peptidase family M50 XFUD_RS04750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase XFUD_RS04750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal XFUD_RS04750 PF13288 DXP reductoisomerase C-terminal domain XFUD_RS04755 PF01148 Cytidylyltransferase family XFUD_RS04760 PF01255 Putative undecaprenyl diphosphate synthase XFUD_RS04765 PF01765 Ribosome recycling factor XFUD_RS04770 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) XFUD_RS04775 PF01694 Rhomboid family XFUD_RS04780 PF08850 XFUD_RS04780 XFUD_RS04795 PF00696 Amino acid kinase family XFUD_RS04820 PF01081 KDPG and KHG aldolase XFUD_RS04825 PF00920 Dehydratase family XFUD_RS04830 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase XFUD_RS04835 PF02685 Glucokinase XFUD_RS04840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain XFUD_RS04840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain XFUD_RS04845 PF00005 ABC transporter XFUD_RS04845 PF08402 TOBE domain XFUD_RS04850 PF08669 Glycine cleavage T-protein C-terminal barrel domain XFUD_RS04855 PF07896 Protein of unknown function (DUF1674) XFUD_RS04860 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XFUD_RS04865 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit XFUD_RS04870 PF00890 FAD binding domain XFUD_RS04870 PF02910 Fumarate reductase flavoprotein C-term XFUD_RS04875 PF13085 2Fe-2S iron-sulfur cluster binding domain XFUD_RS04875 PF13534 4Fe-4S dicluster domain XFUD_RS04880 PF03937 Flavinator of succinate dehydrogenase XFUD_RS04890 PF02687 XFUD_RS04890 XFUD_RS04890 PF12704 MacB-like periplasmic core domain XFUD_RS04895 PF00005 ABC transporter XFUD_RS04900 PF00753 Metallo-beta-lactamase superfamily XFUD_RS04900 PF03772 XFUD_RS04900 XFUD_RS04900 PF13567 XFUD_RS04900 XFUD_RS04905 PF01618 XFUD_RS04905 XFUD_RS04910 PF02472 Biopolymer transport protein ExbD/TolR XFUD_RS04915 PF00005 ABC transporter XFUD_RS04915 PF00664 ABC transporter transmembrane region XFUD_RS04920 PF02606 Tetraacyldisaccharide-1-P 4'-kinase XFUD_RS04925 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XFUD_RS04930 PF00300 Histidine phosphatase superfamily (branch 1) XFUD_RS04935 PF04264 YceI-like domain XFUD_RS04940 PF13091 PLD-like domain XFUD_RS04945 PF13560 Helix-turn-helix domain XFUD_RS04960 PF00710 Asparaginase XFUD_RS04965 PF03358 NADPH-dependent FMN reductase XFUD_RS04970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family XFUD_RS04985 PF11191 Protein of unknown function (DUF2782) XFUD_RS04990 PF00476 DNA polymerase family A XFUD_RS04990 PF01367 5'-3' exonuclease, C-terminal SAM fold XFUD_RS04990 PF01612 3'-5' exonuclease XFUD_RS04990 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain XFUD_RS05000 PF01113 Dihydrodipicolinate reductase, N-terminus XFUD_RS05000 PF05173 Dihydrodipicolinate reductase, C-terminus XFUD_RS05005 PF00117 Glutamine amidotransferase class-I XFUD_RS05005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain XFUD_RS05010 PF02142 MGS-like domain XFUD_RS05010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain XFUD_RS05010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XFUD_RS05015 PF01272 Transcription elongation factor, GreA/GreB, C-term XFUD_RS05015 PF03449 Transcription elongation factor, N-terminal XFUD_RS05025 PF01368 DHH family XFUD_RS05025 PF02272 DHHA1 domain XFUD_RS05030 PF00472 RF-1 domain XFUD_RS05030 PF03462 PCRF domain XFUD_RS05035 PF00152 tRNA synthetases class II (D, K and N) XFUD_RS05035 PF01336 OB-fold nucleic acid binding domain XFUD_RS05040 PF00072 Response regulator receiver domain XFUD_RS05040 PF13487 HD domain XFUD_RS05045 PF00072 Response regulator receiver domain XFUD_RS05045 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS05045 PF01627 Hpt domain XFUD_RS05045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS05050 PF00378 Enoyl-CoA hydratase/isomerase family XFUD_RS05055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain XFUD_RS05055 PF00696 Amino acid kinase family XFUD_RS05055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain XFUD_RS05065 PF08245 Mur ligase middle domain XFUD_RS05075 PF00293 NUDIX domain XFUD_RS05075 PF02581 Thiamine monophosphate synthase/TENI XFUD_RS05080 PF02219 Methylenetetrahydrofolate reductase XFUD_RS05085 PF04402 Protein of unknown function (DUF541) XFUD_RS05090 PF02545 Maf-like protein XFUD_RS05095 PF00575 S1 RNA binding domain XFUD_RS05095 PF10150 Ribonuclease E/G family XFUD_RS05100 PF13116 XFUD_RS05100 XFUD_RS05100 PF13502 XFUD_RS05100 XFUD_RS05105 PF01523 Putative modulator of DNA gyrase XFUD_RS05110 PF04751 Protein of unknown function (DUF615) XFUD_RS05115 PF01523 Putative modulator of DNA gyrase XFUD_RS05120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS05120 PF03466 LysR substrate binding domain XFUD_RS05125 PF03358 NADPH-dependent FMN reductase XFUD_RS05135 PF00107 Zinc-binding dehydrogenase XFUD_RS05135 PF08240 Alcohol dehydrogenase GroES-like domain XFUD_RS05140 PF01965 DJ-1/PfpI family XFUD_RS05150 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS05150 PF12804 MobA-like NTP transferase domain XFUD_RS05155 PF01817 Chorismate mutase type II XFUD_RS05160 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain XFUD_RS05160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain XFUD_RS05165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFUD_RS05165 PF02874 ATP synthase alpha/beta family, beta-barrel domain XFUD_RS05170 PF00231 ATP synthase XFUD_RS05175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFUD_RS05175 PF00306 ATP synthase alpha/beta chain, C terminal domain XFUD_RS05175 PF02874 ATP synthase alpha/beta family, beta-barrel domain XFUD_RS05180 PF00213 ATP synthase delta (OSCP) subunit XFUD_RS05185 PF00430 ATP synthase B/B' CF(0) XFUD_RS05190 PF00137 ATP synthase subunit C XFUD_RS05195 PF00119 ATP synthase A chain XFUD_RS05205 PF00338 Ribosomal protein S10p/S20e XFUD_RS05210 PF00297 Ribosomal protein L3 XFUD_RS05215 PF00573 Ribosomal protein L4/L1 family XFUD_RS05220 PF00276 Ribosomal protein L23 XFUD_RS05225 PF00181 Ribosomal Proteins L2, RNA binding domain XFUD_RS05225 PF03947 Ribosomal Proteins L2, C-terminal domain XFUD_RS05230 PF00203 Ribosomal protein S19 XFUD_RS05235 PF00237 Ribosomal protein L22p/L17e XFUD_RS05240 PF00189 Ribosomal protein S3, C-terminal domain XFUD_RS05240 PF07650 KH domain XFUD_RS05245 PF00252 Ribosomal protein L16p/L10e XFUD_RS05250 PF00831 Ribosomal L29 protein XFUD_RS05255 PF00366 Ribosomal protein S17 XFUD_RS05260 PF00238 Ribosomal protein L14p/L23e XFUD_RS05265 PF00467 KOW motif XFUD_RS05265 PF17136 XFUD_RS05265 XFUD_RS05270 PF00281 Ribosomal protein L5 XFUD_RS05270 PF00673 ribosomal L5P family C-terminus XFUD_RS05275 PF00253 Ribosomal protein S14p/S29e XFUD_RS05280 PF00410 Ribosomal protein S8 XFUD_RS05285 PF00347 Ribosomal protein L6 XFUD_RS05290 PF00861 Ribosomal L18p/L5e family XFUD_RS05295 PF00333 Ribosomal protein S5, N-terminal domain XFUD_RS05295 PF03719 Ribosomal protein S5, C-terminal domain XFUD_RS05300 PF00327 Ribosomal protein L30p/L7e XFUD_RS05305 PF00828 Ribosomal protein L18e/L15 XFUD_RS05310 PF00344 SecY translocase XFUD_RS05315 PF00416 Ribosomal protein S13/S18 XFUD_RS05320 PF00411 Ribosomal protein S11 XFUD_RS05325 PF00163 Ribosomal protein S4/S9 N-terminal domain XFUD_RS05325 PF01479 S4 domain XFUD_RS05330 PF01000 RNA polymerase Rpb3/RpoA insert domain XFUD_RS05330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain XFUD_RS05330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain XFUD_RS05335 PF01196 Ribosomal protein L17 XFUD_RS05340 PF04380 XFUD_RS05340 XFUD_RS05345 PF01078 Magnesium chelatase, subunit ChlI XFUD_RS05345 PF13335 XFUD_RS05345 XFUD_RS05345 PF13541 Subunit ChlI of Mg-chelatase XFUD_RS05350 PF00561 alpha/beta hydrolase fold XFUD_RS05355 PF03280 Proteobacterial lipase chaperone protein XFUD_RS05365 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XFUD_RS05365 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XFUD_RS05365 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XFUD_RS05380 PF05697 Bacterial trigger factor protein (TF) XFUD_RS05380 PF05698 Bacterial trigger factor protein (TF) C-terminus XFUD_RS05385 PF00574 Clp protease XFUD_RS05390 PF06689 ClpX C4-type zinc finger XFUD_RS05390 PF07724 AAA domain (Cdc48 subfamily) XFUD_RS05390 PF10431 C-terminal, D2-small domain, of ClpB protein XFUD_RS05395 PF00004 ATPase family associated with various cellular activities (AAA) XFUD_RS05395 PF02190 ATP-dependent protease La (LON) domain XFUD_RS05395 PF05362 Lon protease (S16) C-terminal proteolytic domain XFUD_RS05400 PF00216 Bacterial DNA-binding protein XFUD_RS05415 PF13616 PPIC-type PPIASE domain XFUD_RS05415 PF13623 XFUD_RS05415 XFUD_RS05420 PF04332 XFUD_RS05420 XFUD_RS05435 PF00317 Ribonucleotide reductase, all-alpha domain XFUD_RS05435 PF02867 Ribonucleotide reductase, barrel domain XFUD_RS05440 PF00268 Ribonucleotide reductase, small chain XFUD_RS05445 PF00258 Flavodoxin XFUD_RS05450 PF00085 Thioredoxin XFUD_RS05455 PF00849 RNA pseudouridylate synthase XFUD_RS05460 PF13419 Haloacid dehalogenase-like hydrolase XFUD_RS05470 PF07209 XFUD_RS05470 XFUD_RS05480 PF00830 Ribosomal L28 family XFUD_RS05485 PF00471 Ribosomal protein L33 XFUD_RS05490 PF13091 PLD-like domain XFUD_RS05495 PF00043 Glutathione S-transferase, C-terminal domain XFUD_RS05495 PF02798 Glutathione S-transferase, N-terminal domain XFUD_RS05500 PF00056 lactate/malate dehydrogenase, NAD binding domain XFUD_RS05500 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain XFUD_RS05505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD XFUD_RS05510 PF00009 Elongation factor Tu GTP binding domain XFUD_RS05510 PF00679 Elongation factor G C-terminus XFUD_RS05510 PF03144 Elongation factor Tu domain 2 XFUD_RS05515 PF09900 XFUD_RS05515 XFUD_RS05520 PF13437 HlyD family secretion protein XFUD_RS05555 PF00005 ABC transporter XFUD_RS05580 PF00271 Helicase conserved C-terminal domain XFUD_RS05580 PF04408 Helicase associated domain (HA2) XFUD_RS05580 PF08482 XFUD_RS05580 XFUD_RS05585 PF13185 GAF domain XFUD_RS05590 PF01103 Surface antigen XFUD_RS05590 PF07244 Surface antigen variable number repeat XFUD_RS05595 PF04357 XFUD_RS05595 XFUD_RS05600 PF13714 Phosphoenolpyruvate phosphomutase XFUD_RS05610 PF01555 DNA methylase XFUD_RS05645 PF04303 PrpF protein XFUD_RS05685 PF00491 Arginase family XFUD_RS05690 PF00207 Alpha-2-macroglobulin family XFUD_RS05690 PF01835 MG2 domain XFUD_RS05690 PF07703 Alpha-2-macroglobulin family N-terminal region XFUD_RS05690 PF11974 Alpha-2-macroglobulin MG1 domain XFUD_RS05695 PF07859 alpha/beta hydrolase fold XFUD_RS05700 PF12833 Helix-turn-helix domain XFUD_RS05700 PF12852 Cupin XFUD_RS05710 PF00929 Exonuclease XFUD_RS05715 PF00924 Mechanosensitive ion channel XFUD_RS05720 PF00391 PEP-utilising enzyme, mobile domain XFUD_RS05720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain XFUD_RS05720 PF02896 PEP-utilising enzyme, TIM barrel domain XFUD_RS05725 PF03618 XFUD_RS05725 XFUD_RS05730 PF06853 XFUD_RS05730 XFUD_RS05735 PF00293 NUDIX domain XFUD_RS05745 PF01391 Collagen triple helix repeat (20 copies) XFUD_RS05755 PF00553 Cellulose binding domain XFUD_RS05755 PF01341 Glycosyl hydrolases family 6 XFUD_RS05760 PF04055 Radical SAM superfamily XFUD_RS05760 PF16881 XFUD_RS05760 XFUD_RS05765 PF03099 Biotin/lipoate A/B protein ligase family XFUD_RS05770 PF04359 Protein of unknown function (DUF493) XFUD_RS05775 PF16697 XFUD_RS05775 XFUD_RS05780 PF05597 XFUD_RS05780 XFUD_RS05790 PF04286 XFUD_RS05790 XFUD_RS05795 PF00571 CBS domain XFUD_RS05795 PF01595 XFUD_RS05795 XFUD_RS05795 PF03471 Transporter associated domain XFUD_RS05800 PF00450 Serine carboxypeptidase XFUD_RS05815 PF00204 DNA gyrase B XFUD_RS05815 PF00986 DNA gyrase B subunit, carboxyl terminus XFUD_RS05815 PF01751 Toprim domain XFUD_RS05815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS05825 PF00117 Glutamine amidotransferase class-I XFUD_RS05825 PF06418 CTP synthase N-terminus XFUD_RS05830 PF00793 DAHP synthetase I family XFUD_RS05835 PF00113 Enolase, C-terminal TIM barrel domain XFUD_RS05835 PF03952 Enolase, N-terminal domain XFUD_RS05840 PF04977 Septum formation initiator XFUD_RS05845 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase XFUD_RS05850 PF02542 YgbB family XFUD_RS05855 PF01713 Smr domain XFUD_RS05860 PF08450 SMP-30/Gluconolaconase/LRE-like region XFUD_RS05865 PF01946 Thi4 family XFUD_RS05865 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase XFUD_RS05870 PF13532 2OG-Fe(II) oxygenase superfamily XFUD_RS05875 PF03886 Protein of unknown function (DUF330) XFUD_RS05880 PF02470 XFUD_RS05880 XFUD_RS05885 PF00005 ABC transporter XFUD_RS05890 PF02405 XFUD_RS05890 XFUD_RS05895 PF06738 XFUD_RS05895 XFUD_RS05895 PF12821 XFUD_RS05895 XFUD_RS05935 PF06723 MreB/Mbl protein XFUD_RS05940 PF04085 rod shape-determining protein MreC XFUD_RS05945 PF04093 XFUD_RS05945 XFUD_RS05950 PF00905 Penicillin binding protein transpeptidase domain XFUD_RS05950 PF03717 Penicillin-binding Protein dimerisation domain XFUD_RS05955 PF01098 XFUD_RS05955 XFUD_RS05960 PF02547 Queuosine biosynthesis protein XFUD_RS05965 PF02824 TGS domain XFUD_RS05965 PF04607 Region found in RelA / SpoT proteins XFUD_RS05965 PF13291 ACT domain XFUD_RS05965 PF13328 HD domain XFUD_RS05980 PF03776 Septum formation topological specificity factor MinE XFUD_RS05985 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain XFUD_RS05990 PF03775 Septum formation inhibitor MinC, C-terminal domain XFUD_RS05990 PF05209 Septum formation inhibitor MinC, N-terminal domain XFUD_RS05995 PF00583 Acetyltransferase (GNAT) family XFUD_RS06010 PF00730 HhH-GPD superfamily base excision DNA repair protein XFUD_RS06015 PF04264 YceI-like domain XFUD_RS06020 PF01292 Prokaryotic cytochrome b561 XFUD_RS06025 PF04264 YceI-like domain XFUD_RS06030 PF00072 Response regulator receiver domain XFUD_RS06030 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS06030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS06030 PF07494 Two component regulator propeller XFUD_RS06030 PF07495 Y_Y_Y domain XFUD_RS06040 PF01208 Uroporphyrinogen decarboxylase (URO-D) XFUD_RS06050 PF01761 3-dehydroquinate synthase XFUD_RS06055 PF01202 Shikimate kinase XFUD_RS06065 PF01243 Pyridoxamine 5'-phosphate oxidase XFUD_RS06065 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region XFUD_RS06070 PF00749 tRNA synthetases class I (E and Q), catalytic domain XFUD_RS06070 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain XFUD_RS06090 PF13531 Bacterial extracellular solute-binding protein XFUD_RS06095 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS06100 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS06105 PF00005 ABC transporter XFUD_RS06110 PF03279 XFUD_RS06110 XFUD_RS06115 PF00140 Sigma-70 factor, region 1 XFUD_RS06115 PF03979 Sigma-70 factor, region 1 XFUD_RS06115 PF04539 Sigma-70 region 3 XFUD_RS06115 PF04542 Sigma-70 region 2 XFUD_RS06115 PF04545 Sigma-70, region 4 XFUD_RS06115 PF04546 Sigma-70, non-essential region XFUD_RS06120 PF00521 DNA gyrase/topoisomerase IV, subunit A XFUD_RS06120 PF03989 DNA gyrase C-terminal domain, beta-propeller XFUD_RS06125 PF01047 MarR family XFUD_RS06135 PF12697 Alpha/beta hydrolase family XFUD_RS06140 PF00155 Aminotransferase class I and II XFUD_RS06145 PF02628 XFUD_RS06145 XFUD_RS06150 PF01040 UbiA prenyltransferase family XFUD_RS06155 PF00753 Metallo-beta-lactamase superfamily XFUD_RS06160 PF01743 Poly A polymerase head domain XFUD_RS06160 PF01966 HD domain XFUD_RS06160 PF12627 Probable RNA and SrmB- binding site of polymerase A XFUD_RS06165 PF01464 Transglycosylase SLT domain XFUD_RS06165 PF14718 Soluble lytic murein transglycosylase L domain XFUD_RS06175 PF02666 XFUD_RS06175 XFUD_RS06180 PF02630 SCO1/SenC XFUD_RS06185 PF05175 Methyltransferase small domain XFUD_RS06190 PF01264 Chorismate synthase XFUD_RS06200 PF01118 Semialdehyde dehydrogenase, NAD binding domain XFUD_RS06200 PF02774 Semialdehyde dehydrogenase, dimerisation domain XFUD_RS06210 PF01416 tRNA pseudouridine synthase XFUD_RS06215 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase XFUD_RS06220 PF00291 Pyridoxal-phosphate dependent enzyme XFUD_RS06225 PF00290 Tryptophan synthase alpha chain XFUD_RS06230 PF13481 AAA domain XFUD_RS06230 PF13541 Subunit ChlI of Mg-chelatase XFUD_RS06235 PF00296 Luciferase-like monooxygenase XFUD_RS06245 PF00270 DEAD/DEAH box helicase XFUD_RS06245 PF00271 Helicase conserved C-terminal domain XFUD_RS06245 PF00570 HRDC domain XFUD_RS06245 PF09382 RQC domain XFUD_RS06245 PF16124 XFUD_RS06245 XFUD_RS06250 PF00210 Ferritin-like domain XFUD_RS06255 PF00270 DEAD/DEAH box helicase XFUD_RS06255 PF00271 Helicase conserved C-terminal domain XFUD_RS06255 PF04408 Helicase associated domain (HA2) XFUD_RS06255 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold XFUD_RS06255 PF11898 XFUD_RS06255 XFUD_RS06260 PF10142 PhoPQ-activated pathogenicity-related protein XFUD_RS06270 PF02347 Glycine cleavage system P-protein XFUD_RS06275 PF03626 XFUD_RS06275 XFUD_RS06280 PF00510 Cytochrome c oxidase subunit III XFUD_RS06285 PF00115 Cytochrome C and Quinol oxidase polypeptide I XFUD_RS06290 PF00116 Cytochrome C oxidase subunit II, periplasmic domain XFUD_RS06290 PF06481 COX Aromatic Rich Motif XFUD_RS06295 PF00348 Polyprenyl synthetase XFUD_RS06300 PF00436 Single-strand binding protein family XFUD_RS06305 PF13649 Methyltransferase domain XFUD_RS06310 PF00999 Sodium/hydrogen exchanger family XFUD_RS06315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XFUD_RS06325 PF00391 PEP-utilising enzyme, mobile domain XFUD_RS06325 PF02896 PEP-utilising enzyme, TIM barrel domain XFUD_RS06325 PF05524 PEP-utilising enzyme, N-terminal XFUD_RS06330 PF00381 PTS HPr component phosphorylation site XFUD_RS06335 PF03610 PTS system fructose IIA component XFUD_RS06340 PF03668 XFUD_RS06340 XFUD_RS06345 PF02603 HPr Serine kinase N terminus XFUD_RS06345 PF07475 HPr Serine kinase C-terminal domain XFUD_RS06350 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein XFUD_RS06355 PF00309 XFUD_RS06355 XFUD_RS06355 PF04552 Sigma-54, DNA binding domain XFUD_RS06355 PF04963 Sigma-54 factor, core binding domain XFUD_RS06360 PF00005 ABC transporter XFUD_RS06360 PF12399 Branched-chain amino acid ATP-binding cassette transporter XFUD_RS06365 PF03968 OstA-like protein XFUD_RS06370 PF06835 Lipopolysaccharide-assembly, LptC-related XFUD_RS06375 PF08282 haloacid dehalogenase-like hydrolase XFUD_RS06380 PF00571 CBS domain XFUD_RS06380 PF01380 SIS domain XFUD_RS06385 PF01722 BolA-like protein XFUD_RS06390 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XFUD_RS06410 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS06430 PF02769 AIR synthase related protein, C-terminal domain XFUD_RS06430 PF13507 CobB/CobQ-like glutamine amidotransferase domain XFUD_RS06435 PF10411 Disulfide bond isomerase protein N-terminus XFUD_RS06435 PF13098 Thioredoxin-like domain XFUD_RS06440 PF00589 Phage integrase family XFUD_RS06440 PF02899 Phage integrase, N-terminal SAM-like domain XFUD_RS06445 PF00520 Ion transport protein XFUD_RS06450 PF00202 Aminotransferase class-III XFUD_RS06455 PF04107 Glutamate-cysteine ligase family 2(GCS2) XFUD_RS06460 PF01926 50S ribosome-binding GTPase XFUD_RS06485 PF13462 Thioredoxin XFUD_RS06490 PF13462 Thioredoxin XFUD_RS06495 PF03372 Endonuclease/Exonuclease/phosphatase family XFUD_RS06500 PF04356 Protein of unknown function (DUF489) XFUD_RS06515 PF02617 ATP-dependent Clp protease adaptor protein ClpS XFUD_RS06520 PF00004 ATPase family associated with various cellular activities (AAA) XFUD_RS06520 PF02861 Clp amino terminal domain XFUD_RS06520 PF07724 AAA domain (Cdc48 subfamily) XFUD_RS06520 PF10431 C-terminal, D2-small domain, of ClpB protein XFUD_RS06530 PF01176 Translation initiation factor 1A / IF-1 XFUD_RS06535 PF03588 Leucyl/phenylalanyl-tRNA protein transferase XFUD_RS06540 PF04339 XFUD_RS06540 XFUD_RS06545 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFUD_RS06550 PF01580 FtsK/SpoIIIE family XFUD_RS06550 PF09397 Ftsk gamma domain XFUD_RS06550 PF13491 XFUD_RS06550 XFUD_RS06555 PF01841 Transglutaminase-like superfamily XFUD_RS06555 PF12969 Domain of Unknown Function with PDB structure (DUF3857) XFUD_RS06560 PF03548 Outer membrane lipoprotein carrier protein LolA XFUD_RS06565 PF05496 Holliday junction DNA helicase ruvB N-terminus XFUD_RS06565 PF12002 MgsA AAA+ ATPase C terminal XFUD_RS06565 PF16193 XFUD_RS06565 XFUD_RS06570 PF02537 XFUD_RS06570 XFUD_RS06575 PF00072 Response regulator receiver domain XFUD_RS06575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS06580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) XFUD_RS06585 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS06590 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase XFUD_RS06600 PF02685 Glucokinase XFUD_RS06610 PF07690 Major Facilitator Superfamily XFUD_RS06615 PF00356 Bacterial regulatory proteins, lacI family XFUD_RS06615 PF13377 Periplasmic binding protein-like domain XFUD_RS06620 PF01380 SIS domain XFUD_RS06625 PF01979 Amidohydrolase family XFUD_RS06630 PF01039 Carboxyl transferase domain XFUD_RS06635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain XFUD_RS06635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I XFUD_RS06635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II XFUD_RS06635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III XFUD_RS06640 PF01522 Polysaccharide deacetylase XFUD_RS06645 PF00534 Glycosyl transferases group 1 XFUD_RS06645 PF13439 Glycosyltransferase Family 4 XFUD_RS06655 PF00355 Rieske [2Fe-2S] domain XFUD_RS06660 PF00266 Aminotransferase class-V XFUD_RS06665 PF01458 Uncharacterized protein family (UPF0051) XFUD_RS06670 PF00005 ABC transporter XFUD_RS06675 PF01458 Uncharacterized protein family (UPF0051) XFUD_RS06680 PF02082 Transcriptional regulator XFUD_RS06685 PF00856 SET domain XFUD_RS06690 PF00326 Prolyl oligopeptidase family XFUD_RS06690 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain XFUD_RS06700 PF01678 Diaminopimelate epimerase XFUD_RS06705 PF04340 Protein of unknown function, DUF484 XFUD_RS06715 PF00227 Proteasome subunit XFUD_RS06720 PF00004 ATPase family associated with various cellular activities (AAA) XFUD_RS06720 PF07724 AAA domain (Cdc48 subfamily) XFUD_RS06720 PF10431 C-terminal, D2-small domain, of ClpB protein XFUD_RS06725 PF10009 XFUD_RS06725 XFUD_RS06730 PF01209 ubiE/COQ5 methyltransferase family XFUD_RS06735 PF01433 Peptidase family M1 XFUD_RS06735 PF09127 Leukotriene A4 hydrolase, C-terminal XFUD_RS06740 PF13899 Thioredoxin-like XFUD_RS06750 PF01047 MarR family XFUD_RS06755 PF00816 H-NS histone family XFUD_RS06760 PF13369 XFUD_RS06760 XFUD_RS06760 PF13371 Tetratricopeptide repeat XFUD_RS06765 PF02643 Uncharacterized ACR, COG1430 XFUD_RS06770 PF00593 TonB dependent receptor XFUD_RS06770 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS06775 PF01507 Phosphoadenosine phosphosulfate reductase family XFUD_RS06780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain XFUD_RS06780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain XFUD_RS06790 PF01507 Phosphoadenosine phosphosulfate reductase family XFUD_RS06795 PF00009 Elongation factor Tu GTP binding domain XFUD_RS06795 PF01583 Adenylylsulphate kinase XFUD_RS06800 PF01192 RNA polymerase Rpb6 XFUD_RS06805 PF00625 Guanylate kinase XFUD_RS06810 PF03755 XFUD_RS06810 XFUD_RS06810 PF08340 XFUD_RS06810 XFUD_RS06815 PF01138 3' exoribonuclease family, domain 1 XFUD_RS06815 PF03725 3' exoribonuclease family, domain 2 XFUD_RS06820 PF01725 Ham1 family XFUD_RS06825 PF04055 Radical SAM superfamily XFUD_RS06825 PF06969 HemN C-terminal domain XFUD_RS06830 PF07793 XFUD_RS06830 XFUD_RS06835 PF07238 PilZ domain XFUD_RS06840 PF00561 alpha/beta hydrolase fold XFUD_RS06850 PF05175 Methyltransferase small domain XFUD_RS06860 PF03547 XFUD_RS06860 XFUD_RS06865 PF03895 YadA-like C-terminal region XFUD_RS06865 PF05658 Head domain of trimeric autotransporter adhesin XFUD_RS06865 PF05662 Coiled stalk of trimeric autotransporter adhesin XFUD_RS06870 PF00437 Type II/IV secretion system protein XFUD_RS06870 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XFUD_RS06875 PF00482 Type II secretion system (T2SS), protein F XFUD_RS06880 PF08334 Type II secretion system (T2SS), protein G XFUD_RS06890 PF13544 XFUD_RS06890 XFUD_RS06900 PF03934 Type II secretion system (T2SS), protein K XFUD_RS06905 PF05137 XFUD_RS06905 XFUD_RS06910 PF10741 XFUD_RS06910 XFUD_RS06920 PF00263 XFUD_RS06920 XFUD_RS06920 PF03958 Bacterial type II/III secretion system short domain XFUD_RS06930 PF03895 YadA-like C-terminal region XFUD_RS06930 PF05658 Head domain of trimeric autotransporter adhesin XFUD_RS06930 PF05662 Coiled stalk of trimeric autotransporter adhesin XFUD_RS06930 PF06669 XFUD_RS06930 XFUD_RS06935 PF00578 AhpC/TSA family XFUD_RS06940 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFUD_RS06940 PF13192 Thioredoxin domain XFUD_RS06945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS06945 PF03466 LysR substrate binding domain XFUD_RS06950 PF00814 Glycoprotease family XFUD_RS06955 PF01197 Ribosomal protein L31 XFUD_RS06960 PF00285 Citrate synthase XFUD_RS06965 PF00380 Ribosomal protein S9/S16 XFUD_RS06970 PF00572 Ribosomal protein L13 XFUD_RS06975 PF03232 XFUD_RS06975 XFUD_RS06980 PF02675 S-adenosylmethionine decarboxylase XFUD_RS06985 PF00027 Cyclic nucleotide-binding domain XFUD_RS06985 PF00325 Bacterial regulatory proteins, crp family XFUD_RS06995 PF00899 ThiF family XFUD_RS07000 PF05433 XFUD_RS07000 XFUD_RS07005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain XFUD_RS07005 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFUD_RS07015 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) XFUD_RS07015 PF00364 Biotin-requiring enzyme XFUD_RS07015 PF02817 e3 binding domain XFUD_RS07020 PF00676 Dehydrogenase E1 component XFUD_RS07020 PF02779 Transketolase, pyrimidine binding domain XFUD_RS07020 PF16078 XFUD_RS07020 XFUD_RS07020 PF16870 XFUD_RS07020 XFUD_RS07025 PF08007 Cupin superfamily protein XFUD_RS07030 PF00206 Lyase XFUD_RS07030 PF08328 Adenylosuccinate lyase C-terminal XFUD_RS07040 PF00206 Lyase XFUD_RS07040 PF10415 Fumarase C C-terminus XFUD_RS07050 PF13986 XFUD_RS07050 XFUD_RS07055 PF00436 Single-strand binding protein family XFUD_RS07065 PF07120 XFUD_RS07065 XFUD_RS07085 PF04365 Protein of unknown function (DUF497) XFUD_RS07090 PF14384 XFUD_RS07090 XFUD_RS07095 PF00959 Phage lysozyme XFUD_RS07100 PF16083 XFUD_RS07100 XFUD_RS07125 PF06381 XFUD_RS07125 XFUD_RS07130 PF13744 Helix-turn-helix domain XFUD_RS07135 PF05973 XFUD_RS07135 XFUD_RS07140 PF04233 XFUD_RS07140 XFUD_RS07145 PF09979 XFUD_RS07145 XFUD_RS07155 PF09950 XFUD_RS07155 XFUD_RS07165 PF13262 XFUD_RS07165 XFUD_RS07185 PF11863 XFUD_RS07185 XFUD_RS07190 PF11681 XFUD_RS07190 XFUD_RS07195 PF10876 XFUD_RS07195 XFUD_RS07215 PF01850 PIN domain XFUD_RS07275 PF00005 ABC transporter XFUD_RS07280 PF00255 Glutathione peroxidase XFUD_RS07285 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase XFUD_RS07285 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase XFUD_RS07290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain XFUD_RS07290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain XFUD_RS07290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain XFUD_RS07295 PF04102 SlyX XFUD_RS07300 PF09831 XFUD_RS07300 XFUD_RS07305 PF07690 Major Facilitator Superfamily XFUD_RS07310 PF00294 pfkB family carbohydrate kinase XFUD_RS07315 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) XFUD_RS07320 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family XFUD_RS07335 PF01022 Bacterial regulatory protein, arsR family XFUD_RS07335 PF08241 Methyltransferase domain XFUD_RS07345 PF00144 Beta-lactamase XFUD_RS07350 PF13632 Glycosyl transferase family group 2 XFUD_RS07355 PF02230 Phospholipase/Carboxylesterase XFUD_RS07360 PF06580 XFUD_RS07360 XFUD_RS07365 PF00072 Response regulator receiver domain XFUD_RS07365 PF04397 LytTr DNA-binding domain XFUD_RS07370 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain XFUD_RS07370 PF03900 Porphobilinogen deaminase, C-terminal domain XFUD_RS07385 PF13280 XFUD_RS07385 XFUD_RS07390 PF00437 Type II/IV secretion system protein XFUD_RS07395 PF00437 Type II/IV secretion system protein XFUD_RS07410 PF00535 Glycosyl transferase family 2 XFUD_RS07420 PF00535 Glycosyl transferase family 2 XFUD_RS07425 PF13723 XFUD_RS07425 XFUD_RS07430 PF00109 Beta-ketoacyl synthase, N-terminal domain XFUD_RS07430 PF02801 Beta-ketoacyl synthase, C-terminal domain XFUD_RS07440 PF12796 Ankyrin repeats (3 copies) XFUD_RS07445 PF03706 XFUD_RS07445 XFUD_RS07445 PF09924 Uncharacterized conserved protein (DUF2156) XFUD_RS07450 PF00589 Phage integrase family XFUD_RS07455 PF13986 XFUD_RS07455 XFUD_RS07460 PF00436 Single-strand binding protein family XFUD_RS07465 PF02498 XFUD_RS07465 XFUD_RS07470 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS07475 PF09588 YqaJ-like viral recombinase domain XFUD_RS07480 PF03837 XFUD_RS07480 XFUD_RS07485 PF10065 XFUD_RS07485 XFUD_RS07525 PF02661 Fic/DOC family XFUD_RS07530 PF00717 Peptidase S24-like XFUD_RS07565 PF02498 XFUD_RS07565 XFUD_RS07570 PF07120 XFUD_RS07570 XFUD_RS07575 PF07120 XFUD_RS07575 XFUD_RS07595 PF07927 YcfA-like protein XFUD_RS07600 PF05534 XFUD_RS07600 XFUD_RS07605 PF00959 Phage lysozyme XFUD_RS07610 PF16083 XFUD_RS07610 XFUD_RS07640 PF13744 Helix-turn-helix domain XFUD_RS07645 PF05973 XFUD_RS07645 XFUD_RS07650 PF04233 XFUD_RS07650 XFUD_RS07655 PF09979 XFUD_RS07655 XFUD_RS07665 PF09950 XFUD_RS07665 XFUD_RS07675 PF13262 XFUD_RS07675 XFUD_RS07695 PF11863 XFUD_RS07695 XFUD_RS07700 PF11681 XFUD_RS07700 XFUD_RS07705 PF10876 XFUD_RS07705 XFUD_RS07715 PF10439 XFUD_RS07715 XFUD_RS07725 PF04014 Antidote-toxin recognition MazE XFUD_RS07730 PF05016 Plasmid stabilisation system protein XFUD_RS07765 PF01381 Helix-turn-helix XFUD_RS07770 PF05973 XFUD_RS07770 XFUD_RS07775 PF04865 XFUD_RS07775 XFUD_RS07780 PF11041 XFUD_RS07780 XFUD_RS07785 PF07484 Phage Tail Collar Domain XFUD_RS07795 PF01381 Helix-turn-helix XFUD_RS07810 PF01042 Endoribonuclease L-PSP XFUD_RS07830 PF00912 Transglycosylase XFUD_RS07835 PF00488 MutS domain V XFUD_RS07835 PF01624 MutS domain I XFUD_RS07835 PF05188 MutS domain II XFUD_RS07835 PF05190 MutS family domain IV XFUD_RS07835 PF05192 MutS domain III XFUD_RS07840 PF01168 Alanine racemase, N-terminal domain XFUD_RS07850 PF00589 Phage integrase family XFUD_RS07850 PF13356 Domain of unknown function (DUF4102) XFUD_RS07850 PF14659 Phage integrase, N-terminal SAM-like domain XFUD_RS07855 PF03466 LysR substrate binding domain XFUD_RS07860 PF13560 Helix-turn-helix domain XFUD_RS07865 PF03466 LysR substrate binding domain XFUD_RS07870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS07875 PF00248 Aldo/keto reductase family XFUD_RS07880 PF00248 Aldo/keto reductase family XFUD_RS07885 PF01361 Tautomerase enzyme XFUD_RS07890 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS07895 PF00107 Zinc-binding dehydrogenase XFUD_RS07895 PF08240 Alcohol dehydrogenase GroES-like domain XFUD_RS07900 PF07690 Major Facilitator Superfamily XFUD_RS07905 PF00248 Aldo/keto reductase family XFUD_RS07910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS07910 PF03466 LysR substrate binding domain XFUD_RS07915 PF00724 NADH:flavin oxidoreductase / NADH oxidase family XFUD_RS07920 PF03358 NADPH-dependent FMN reductase XFUD_RS07925 PF00107 Zinc-binding dehydrogenase XFUD_RS07925 PF08240 Alcohol dehydrogenase GroES-like domain XFUD_RS07930 PF07995 Glucose / Sorbosone dehydrogenase XFUD_RS07935 PF10012 XFUD_RS07935 XFUD_RS07940 PF03807 NADP oxidoreductase coenzyme F420-dependent XFUD_RS07950 PF12706 Beta-lactamase superfamily domain XFUD_RS07955 PF07995 Glucose / Sorbosone dehydrogenase XFUD_RS07960 PF00106 short chain dehydrogenase XFUD_RS07965 PF08450 SMP-30/Gluconolaconase/LRE-like region XFUD_RS07970 PF07859 alpha/beta hydrolase fold XFUD_RS07975 PF00106 short chain dehydrogenase XFUD_RS07980 PF01738 Dienelactone hydrolase family XFUD_RS07985 PF00107 Zinc-binding dehydrogenase XFUD_RS07985 PF08240 Alcohol dehydrogenase GroES-like domain XFUD_RS07990 PF13460 NADH(P)-binding XFUD_RS07995 PF01872 RibD C-terminal domain XFUD_RS08000 PF07690 Major Facilitator Superfamily XFUD_RS08005 PF05448 Acetyl xylan esterase (AXE1) XFUD_RS08015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS08015 PF03466 LysR substrate binding domain XFUD_RS08020 PF07514 Putative helicase XFUD_RS08020 PF07515 Protein of unknown function (DUF1528) XFUD_RS08035 PF08808 XFUD_RS08035 XFUD_RS08040 PF12553 XFUD_RS08040 XFUD_RS08065 PF11679 XFUD_RS08065 XFUD_RS08070 PF12101 XFUD_RS08070 XFUD_RS08080 PF01507 Phosphoadenosine phosphosulfate reductase family XFUD_RS08085 PF11284 XFUD_RS08085 XFUD_RS08095 PF07690 Major Facilitator Superfamily XFUD_RS08100 PF02627 Carboxymuconolactone decarboxylase family XFUD_RS08105 PF07883 Cupin domain XFUD_RS08110 PF07883 Cupin domain XFUD_RS08115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family XFUD_RS08115 PF03466 LysR substrate binding domain XFUD_RS08150 PF00145 C-5 cytosine-specific DNA methylase XFUD_RS08160 PF00145 C-5 cytosine-specific DNA methylase XFUD_RS08170 PF00436 Single-strand binding protein family XFUD_RS08175 PF11358 XFUD_RS08175 XFUD_RS08180 PF08900 XFUD_RS08180 XFUD_RS08195 PF11198 XFUD_RS08195 XFUD_RS08210 PF13614 AAA domain XFUD_RS08215 PF05930 Prophage CP4-57 regulatory protein (AlpA) XFUD_RS08255 PF05036 Sporulation related domain XFUD_RS08260 PF03309 Type III pantothenate kinase XFUD_RS08265 PF02237 Biotin protein ligase C terminal domain XFUD_RS08265 PF03099 Biotin/lipoate A/B protein ligase family XFUD_RS08265 PF08279 HTH domain XFUD_RS08270 PF07219 XFUD_RS08270 XFUD_RS08275 PF04375 XFUD_RS08275 XFUD_RS08280 PF02602 Uroporphyrinogen-III synthase HemD XFUD_RS08290 PF00581 Rhodanese-like domain XFUD_RS08295 PF02556 Preprotein translocase subunit SecB XFUD_RS08300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XFUD_RS08300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus XFUD_RS08305 PF13505 Outer membrane protein beta-barrel domain XFUD_RS08310 PF02086 D12 class N6 adenine-specific DNA methyltransferase XFUD_RS08325 PF12169 DNA polymerase III subunits gamma and tau domain III XFUD_RS08325 PF12170 DNA polymerase III tau subunit V interacting with alpha XFUD_RS08325 PF13177 DNA polymerase III, delta subunit XFUD_RS08330 PF02575 YbaB/EbfC DNA-binding family XFUD_RS08335 PF02132 RecR protein XFUD_RS08335 PF13662 Toprim domain XFUD_RS08340 PF01230 HIT domain XFUD_RS08345 PF03843 XFUD_RS08345 XFUD_RS08350 PF01841 Transglutaminase-like superfamily XFUD_RS08350 PF11992 XFUD_RS08350 XFUD_RS08355 PF01882 XFUD_RS08355 XFUD_RS08360 PF07726 ATPase family associated with various cellular activities (AAA) XFUD_RS08365 PF13231 XFUD_RS08365 XFUD_RS08370 PF02620 XFUD_RS08370 XFUD_RS08375 PF01783 Ribosomal L32p protein family XFUD_RS08380 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XFUD_RS08380 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XFUD_RS08385 PF00682 HMGL-like XFUD_RS08385 PF08502 LeuA allosteric (dimerisation) domain XFUD_RS08390 PF00291 Pyridoxal-phosphate dependent enzyme XFUD_RS08395 PF13710 ACT domain XFUD_RS08400 PF00205 Thiamine pyrophosphate enzyme, central domain XFUD_RS08400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFUD_RS08400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain XFUD_RS08405 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain XFUD_RS08405 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain XFUD_RS08410 PF00595 PDZ domain (Also known as DHR or GLGF) XFUD_RS08410 PF03572 Peptidase family S41 XFUD_RS08410 PF11818 XFUD_RS08410 XFUD_RS08415 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family XFUD_RS08420 PF02566 OsmC-like protein XFUD_RS08425 PF03969 AFG1-like ATPase XFUD_RS08430 PF02129 X-Pro dipeptidyl-peptidase (S15 family) XFUD_RS08435 PF02492 CobW/HypB/UreG, nucleotide-binding domain XFUD_RS08435 PF07683 Cobalamin synthesis protein cobW C-terminal domain XFUD_RS08440 PF00551 Formyl transferase XFUD_RS08440 PF13740 ACT domain XFUD_RS08445 PF02036 SCP-2 sterol transfer family XFUD_RS08450 PF03109 XFUD_RS08450 XFUD_RS08455 PF13899 Thioredoxin-like XFUD_RS08460 PF07055 Enoyl reductase FAD binding domain XFUD_RS08460 PF12241 Trans-2-enoyl-CoA reductase catalytic region XFUD_RS08460 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase XFUD_RS08470 PF09916 XFUD_RS08470 XFUD_RS08475 PF06258 XFUD_RS08475 XFUD_RS08480 PF04264 YceI-like domain XFUD_RS08485 PF02673 XFUD_RS08485 XFUD_RS08490 PF00120 Glutamine synthetase, catalytic domain XFUD_RS08490 PF03951 Glutamine synthetase, beta-Grasp domain XFUD_RS08495 PF00543 Nitrogen regulatory protein P-II XFUD_RS08500 PF00909 Ammonium Transporter Family XFUD_RS08510 PF00072 Response regulator receiver domain XFUD_RS08510 PF00158 Sigma-54 interaction domain XFUD_RS08510 PF02954 Bacterial regulatory protein, Fis family XFUD_RS08515 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS08515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS08530 PF00082 Subtilase family XFUD_RS08530 PF03797 Autotransporter beta-domain XFUD_RS08530 PF12951 XFUD_RS08530 XFUD_RS08545 PF03572 Peptidase family S41 XFUD_RS08545 PF14684 Tricorn protease C1 domain XFUD_RS08550 PF05681 XFUD_RS08550 XFUD_RS08550 PF05683 Fumarase C-terminus XFUD_RS08555 PF00152 tRNA synthetases class II (D, K and N) XFUD_RS08555 PF01336 OB-fold nucleic acid binding domain XFUD_RS08555 PF02938 GAD domain XFUD_RS08560 PF06508 Queuosine biosynthesis protein QueC XFUD_RS08570 PF12472 XFUD_RS08570 XFUD_RS08575 PF02486 XFUD_RS08575 XFUD_RS08585 PF02452 PemK-like protein XFUD_RS08590 PF11455 XFUD_RS08590 XFUD_RS08595 PF12472 XFUD_RS08595 XFUD_RS08625 PF10734 XFUD_RS08625 XFUD_RS08630 PF05707 Zonular occludens toxin (Zot) XFUD_RS08645 PF12375 XFUD_RS08645 XFUD_RS08655 PF05707 Zonular occludens toxin (Zot) XFUD_RS08660 PF10734 XFUD_RS08660 XFUD_RS08680 PF05840 XFUD_RS08680 XFUD_RS08700 PF12472 XFUD_RS08700 XFUD_RS08705 PF00300 Histidine phosphatase superfamily (branch 1) XFUD_RS08710 PF10459 Peptidase S46 XFUD_RS08715 PF01964 ThiC family XFUD_RS08715 PF13667 ThiC-associated domain XFUD_RS08720 PF00175 Oxidoreductase NAD-binding domain XFUD_RS08720 PF00970 Oxidoreductase FAD-binding domain XFUD_RS08725 PF00255 Glutathione peroxidase XFUD_RS08730 PF00854 POT family XFUD_RS08735 PF04493 Endonuclease V XFUD_RS08740 PF00300 Histidine phosphatase superfamily (branch 1) XFUD_RS08745 PF04055 Radical SAM superfamily XFUD_RS08745 PF13394 4Fe-4S single cluster domain XFUD_RS08750 PF13525 Outer membrane lipoprotein XFUD_RS08750 PF16331 XFUD_RS08750 XFUD_RS08755 PF00691 OmpA family XFUD_RS08760 PF04052 TolB amino-terminal domain XFUD_RS08760 PF07676 WD40-like Beta Propeller Repeat XFUD_RS08765 PF13103 TonB C terminal XFUD_RS08770 PF02472 Biopolymer transport protein ExbD/TolR XFUD_RS08775 PF01618 XFUD_RS08775 XFUD_RS08780 PF03061 Thioesterase superfamily XFUD_RS08785 PF05491 Holliday junction DNA helicase ruvB C-terminus XFUD_RS08785 PF05496 Holliday junction DNA helicase ruvB N-terminus XFUD_RS08790 PF02705 XFUD_RS08790 XFUD_RS08795 PF01330 RuvA N terminal domain XFUD_RS08795 PF07499 RuvA, C-terminal domain XFUD_RS08795 PF14520 Helix-hairpin-helix domain XFUD_RS08800 PF02075 Crossover junction endodeoxyribonuclease RuvC XFUD_RS08805 PF01709 Transcriptional regulator XFUD_RS08810 PF10881 XFUD_RS08810 XFUD_RS08815 PF04362 Bacterial Fe(2+) trafficking XFUD_RS08820 PF00730 HhH-GPD superfamily base excision DNA repair protein XFUD_RS08820 PF14815 NUDIX domain XFUD_RS08825 PF00448 SRP54-type protein, GTPase domain XFUD_RS08825 PF02881 SRP54-type protein, helical bundle domain XFUD_RS08835 PF14279 XFUD_RS08835 XFUD_RS08840 PF01026 TatD related DNase XFUD_RS08845 PF00425 chorismate binding enzyme XFUD_RS08845 PF04715 Anthranilate synthase component I, N terminal region XFUD_RS08850 PF00117 Glutamine amidotransferase class-I XFUD_RS08860 PF00583 Acetyltransferase (GNAT) family XFUD_RS08865 PF14518 Iron-containing redox enzyme XFUD_RS08870 PF03358 NADPH-dependent FMN reductase XFUD_RS08875 PF01371 Trp repressor protein XFUD_RS08880 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XFUD_RS08880 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XFUD_RS08890 PF02445 Quinolinate synthetase A protein XFUD_RS08895 PF00890 FAD binding domain XFUD_RS08895 PF02910 Fumarate reductase flavoprotein C-term XFUD_RS08900 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain XFUD_RS08900 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain XFUD_RS08955 PF03372 Endonuclease/Exonuclease/phosphatase family XFUD_RS08960 PF01648 4'-phosphopantetheinyl transferase superfamily XFUD_RS08965 PF02527 rRNA small subunit methyltransferase G XFUD_RS08970 PF00456 Transketolase, thiamine diphosphate binding domain XFUD_RS08970 PF02779 Transketolase, pyrimidine binding domain XFUD_RS08970 PF02780 Transketolase, C-terminal domain XFUD_RS08975 PF00375 Sodium:dicarboxylate symporter family XFUD_RS08980 PF01625 Peptide methionine sulfoxide reductase XFUD_RS08985 PF08332 Calcium/calmodulin dependent protein kinase II Association XFUD_RS09000 PF00216 Bacterial DNA-binding protein XFUD_RS09005 PF01432 Peptidase family M3 XFUD_RS09010 PF06903 XFUD_RS09010 XFUD_RS09015 PF08245 Mur ligase middle domain XFUD_RS09020 PF05036 Sporulation related domain XFUD_RS09025 PF02674 XFUD_RS09025 XFUD_RS09030 PF13522 Glutamine amidotransferase domain XFUD_RS09035 PF01584 CheW-like domain XFUD_RS09040 PF01339 CheB methylesterase XFUD_RS09045 PF00072 Response regulator receiver domain XFUD_RS09045 PF01584 CheW-like domain XFUD_RS09045 PF01627 Hpt domain XFUD_RS09045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS09045 PF02895 Signal transducing histidine kinase, homodimeric domain XFUD_RS09050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain XFUD_RS09055 PF01584 CheW-like domain XFUD_RS09060 PF00072 Response regulator receiver domain XFUD_RS09065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain XFUD_RS09065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain XFUD_RS09070 PF03544 Gram-negative bacterial TonB protein C-terminal XFUD_RS09080 PF02092 XFUD_RS09080 XFUD_RS09080 PF05746 DALR anticodon binding domain XFUD_RS09085 PF02091 Glycyl-tRNA synthetase alpha subunit XFUD_RS09090 PF00795 Carbon-nitrogen hydrolase XFUD_RS09090 PF02540 NAD synthase XFUD_RS09100 PF03692 XFUD_RS09100 XFUD_RS09105 PF00561 alpha/beta hydrolase fold XFUD_RS09110 PF04851 Type III restriction enzyme, res subunit XFUD_RS09120 PF01555 DNA methylase XFUD_RS09125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal XFUD_RS09125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III XFUD_RS09130 PF13698 XFUD_RS09130 XFUD_RS09135 PF00588 SpoU rRNA Methylase family XFUD_RS09150 PF01808 AICARFT/IMPCHase bienzyme XFUD_RS09150 PF02142 MGS-like domain XFUD_RS09155 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain XFUD_RS09155 PF02843 Phosphoribosylglycinamide synthetase, C domain XFUD_RS09155 PF02844 Phosphoribosylglycinamide synthetase, N domain XFUD_RS09165 PF12805 XFUD_RS09165 XFUD_RS09165 PF13515 XFUD_RS09165 XFUD_RS09175 PF03895 YadA-like C-terminal region XFUD_RS09175 PF05658 Head domain of trimeric autotransporter adhesin XFUD_RS09175 PF05662 Coiled stalk of trimeric autotransporter adhesin XFUD_RS09185 PF01227 GTP cyclohydrolase I XFUD_RS09190 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS09195 PF00588 SpoU rRNA Methylase family XFUD_RS09195 PF08032 RNA 2'-O ribose methyltransferase substrate binding XFUD_RS09205 PF00575 S1 RNA binding domain XFUD_RS09205 PF00773 RNB domain XFUD_RS09205 PF08206 Ribonuclease B OB domain XFUD_RS09215 PF00578 AhpC/TSA family XFUD_RS09220 PF00925 GTP cyclohydrolase II XFUD_RS09230 PF00535 Glycosyl transferase family 2 XFUD_RS09235 PF04932 XFUD_RS09235 XFUD_RS09245 PF01381 Helix-turn-helix XFUD_RS09250 PF11906 XFUD_RS09250 XFUD_RS09255 PF02954 Bacterial regulatory protein, Fis family XFUD_RS09260 PF01063 Aminotransferase class IV XFUD_RS09265 PF01883 Domain of unknown function DUF59 XFUD_RS09280 PF07793 XFUD_RS09280 XFUD_RS09290 PF07793 XFUD_RS09290 XFUD_RS09295 PF00881 Nitroreductase family XFUD_RS09300 PF00293 NUDIX domain XFUD_RS09305 PF00557 Metallopeptidase family M24 XFUD_RS09305 PF05195 Aminopeptidase P, N-terminal domain XFUD_RS09310 PF03695 Uncharacterised protein family (UPF0149) XFUD_RS09320 PF05164 Cell division protein ZapA XFUD_RS09330 PF01812 5-formyltetrahydrofolate cyclo-ligase family XFUD_RS09335 PF01878 EVE domain XFUD_RS09340 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) XFUD_RS09350 PF00999 Sodium/hydrogen exchanger family XFUD_RS09365 PF00929 Exonuclease XFUD_RS09365 PF08411 Exonuclease C-terminal XFUD_RS09370 PF09365 XFUD_RS09370 XFUD_RS09375 PF12706 Beta-lactamase superfamily domain XFUD_RS09380 PF13662 Toprim domain XFUD_RS09385 PF03692 XFUD_RS09385 XFUD_RS09390 PF00239 Resolvase, N terminal domain XFUD_RS09390 PF02796 Helix-turn-helix domain of resolvase XFUD_RS09405 PF04255 Protein of unknown function (DUF433) XFUD_RS09410 PF09386 Antitoxin ParD XFUD_RS09415 PF05016 Plasmid stabilisation system protein XFUD_RS09445 PF13480 Acetyltransferase (GNAT) domain XFUD_RS09450 PF04299 Putative FMN-binding domain XFUD_RS09455 PF05118 Aspartyl/Asparaginyl beta-hydroxylase XFUD_RS09460 PF11899 XFUD_RS09460 XFUD_RS09465 PF14518 Iron-containing redox enzyme XFUD_RS09510 PF04610 XFUD_RS09510 XFUD_RS09525 PF03743 Bacterial conjugation TrbI-like protein XFUD_RS09530 PF07283 XFUD_RS09530 XFUD_RS09535 PF03524 Conjugal transfer protein XFUD_RS09540 PF04335 VirB8 protein XFUD_RS09550 PF05101 XFUD_RS09550 XFUD_RS09555 PF04956 XFUD_RS09555 XFUD_RS09560 PF00437 Type II/IV secretion system protein XFUD_RS09565 PF02534 Type IV secretory system Conjugative DNA transfer XFUD_RS09570 PF10502 Signal peptidase, peptidase S26 XFUD_RS09575 PF01131 DNA topoisomerase XFUD_RS09575 PF01751 Toprim domain XFUD_RS09585 PF08401 XFUD_RS09585 XFUD_RS09585 PF13662 Toprim domain XFUD_RS09610 PF05016 Plasmid stabilisation system protein XFUD_RS09635 PF03693 Uncharacterised protein family (UPF0156) XFUD_RS09645 PF05016 Plasmid stabilisation system protein XFUD_RS09650 PF01402 Ribbon-helix-helix protein, copG family XFUD_RS09655 PF07282 XFUD_RS09655 XFUD_RS09675 PF15738 XFUD_RS09675 XFUD_RS09680 PF04221 RelB antitoxin XFUD_RS09685 PF00106 short chain dehydrogenase XFUD_RS09690 PF00873 AcrB/AcrD/AcrF family XFUD_RS09695 PF16576 XFUD_RS09695 XFUD_RS09700 PF00440 Bacterial regulatory proteins, tetR family XFUD_RS09715 PF07883 Cupin domain XFUD_RS09720 PF06189 XFUD_RS09720 XFUD_RS09725 PF01513 ATP-NAD kinase XFUD_RS09740 PF16576 XFUD_RS09740 XFUD_RS09745 PF00873 AcrB/AcrD/AcrF family XFUD_RS09750 PF00132 Bacterial transferase hexapeptide (six repeats) XFUD_RS09755 PF02649 Type I GTP cyclohydrolase folE2 XFUD_RS09770 PF08241 Methyltransferase domain XFUD_RS09775 PF05118 Aspartyl/Asparaginyl beta-hydroxylase XFUD_RS09780 PF02698 DUF218 domain XFUD_RS09795 PF01134 Glucose inhibited division protein A XFUD_RS09795 PF13932 GidA associated domain 3 XFUD_RS09825 PF01381 Helix-turn-helix XFUD_RS09860 PF13550 XFUD_RS09860 XFUD_RS09885 PF05136 XFUD_RS09885 XFUD_RS09895 PF05876 XFUD_RS09895 XFUD_RS09900 PF05272 XFUD_RS09900 XFUD_RS09905 PF01807 CHC2 zinc finger XFUD_RS09925 PF15943 XFUD_RS09925 XFUD_RS09930 PF00717 Peptidase S24-like XFUD_RS09945 PF13986 XFUD_RS09945 XFUD_RS09955 PF00005 ABC transporter XFUD_RS09955 PF12848 ABC transporter XFUD_RS09960 PF00593 TonB dependent receptor XFUD_RS09960 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS09965 PF01323 DSBA-like thioredoxin domain XFUD_RS09970 PF00593 TonB dependent receptor XFUD_RS09970 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS09980 PF00999 Sodium/hydrogen exchanger family XFUD_RS09980 PF02254 TrkA-N domain XFUD_RS09985 PF12849 PBP superfamily domain XFUD_RS09990 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS09995 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS10000 PF00005 ABC transporter XFUD_RS10005 PF01895 PhoU domain XFUD_RS10010 PF00929 Exonuclease XFUD_RS10015 PF00398 Ribosomal RNA adenine dimethylase XFUD_RS10020 PF04379 Protein of unknown function (DUF525) XFUD_RS10025 PF00149 Calcineurin-like phosphoesterase XFUD_RS10030 PF03583 Secretory lipase XFUD_RS10040 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family XFUD_RS10045 PF01075 Glycosyltransferase family 9 (heptosyltransferase) XFUD_RS10060 PF13672 Protein phosphatase 2C XFUD_RS10065 PF00929 Exonuclease XFUD_RS10070 PF00075 RNase H XFUD_RS10080 PF00753 Metallo-beta-lactamase superfamily XFUD_RS10080 PF16123 XFUD_RS10080 XFUD_RS10095 PF00575 S1 RNA binding domain XFUD_RS10095 PF09371 Tex-like protein N-terminal domain XFUD_RS10095 PF12836 Helix-hairpin-helix motif XFUD_RS10095 PF16921 XFUD_RS10095 XFUD_RS10100 PF13432 Tetratricopeptide repeat XFUD_RS10105 PF01161 Phosphatidylethanolamine-binding protein XFUD_RS10110 PF00719 Inorganic pyrophosphatase XFUD_RS10120 PF00085 Thioredoxin XFUD_RS10120 PF14559 Tetratricopeptide repeat XFUD_RS10120 PF14561 Tetratricopeptide repeat XFUD_RS10125 PF06197 XFUD_RS10125 XFUD_RS10130 PF00133 tRNA synthetases class I (I, L, M and V) XFUD_RS10130 PF08264 Anticodon-binding domain of tRNA XFUD_RS10130 PF13603 Leucyl-tRNA synthetase, Domain 2 XFUD_RS10135 PF04390 Lipopolysaccharide-assembly XFUD_RS10140 PF06144 DNA polymerase III, delta subunit XFUD_RS10145 PF01467 Cytidylyltransferase XFUD_RS10150 PF02410 Oligomerisation domain XFUD_RS10175 PF13406 Transglycosylase SLT domain XFUD_RS10180 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel XFUD_RS10180 PF05036 Sporulation related domain XFUD_RS10185 PF01694 Rhomboid family XFUD_RS10195 PF13930 DNA/RNA non-specific endonuclease XFUD_RS10215 PF05590 XFUD_RS10215 XFUD_RS10220 PF04591 Protein of unknown function, DUF596 XFUD_RS10225 PF05590 XFUD_RS10225 XFUD_RS10225 PF05594 XFUD_RS10225 XFUD_RS10225 PF05860 haemagglutination activity domain XFUD_RS10225 PF13018 XFUD_RS10225 XFUD_RS10225 PF13332 XFUD_RS10225 XFUD_RS10235 PF04591 Protein of unknown function, DUF596 XFUD_RS10245 PF04591 Protein of unknown function, DUF596 XFUD_RS10250 PF06325 Ribosomal protein L11 methyltransferase (PrmA) XFUD_RS10260 PF01132 Elongation factor P (EF-P) OB domain XFUD_RS10260 PF08207 Elongation factor P (EF-P) KOW-like domain XFUD_RS10260 PF09285 Elongation factor P, C-terminal XFUD_RS10265 PF01565 FAD binding domain XFUD_RS10265 PF02913 FAD linked oxidases, C-terminal domain XFUD_RS10270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain XFUD_RS10270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain XFUD_RS10275 PF13520 Amino acid permease XFUD_RS10280 PF13520 Amino acid permease XFUD_RS10285 PF00596 Class II Aldolase and Adducin N-terminal domain XFUD_RS10290 PF03079 ARD/ARD' family XFUD_RS10300 PF01502 Phosphoribosyl-AMP cyclohydrolase XFUD_RS10300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase XFUD_RS10305 PF00977 Histidine biosynthesis protein XFUD_RS10310 PF00977 Histidine biosynthesis protein XFUD_RS10315 PF00117 Glutamine amidotransferase class-I XFUD_RS10320 PF00475 Imidazoleglycerol-phosphate dehydratase XFUD_RS10325 PF00155 Aminotransferase class I and II XFUD_RS10330 PF00815 Histidinol dehydrogenase XFUD_RS10335 PF01634 ATP phosphoribosyltransferase XFUD_RS10335 PF08029 HisG, C-terminal domain XFUD_RS10340 PF01371 Trp repressor protein XFUD_RS10345 PF03129 Anticodon binding domain XFUD_RS10345 PF13393 Histidyl-tRNA synthetase XFUD_RS10350 PF00291 Pyridoxal-phosphate dependent enzyme XFUD_RS10350 PF14821 Threonine synthase N terminus XFUD_RS10355 PF00288 GHMP kinases N terminal domain XFUD_RS10355 PF08544 GHMP kinases C terminal XFUD_RS10360 PF00696 Amino acid kinase family XFUD_RS10360 PF00742 Homoserine dehydrogenase XFUD_RS10360 PF03447 Homoserine dehydrogenase, NAD binding domain XFUD_RS10360 PF13840 ACT domain XFUD_RS10365 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain XFUD_RS10365 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain XFUD_RS10370 PF03652 Uncharacterised protein family (UPF0081) XFUD_RS10375 PF02622 Uncharacterized ACR, COG1678 XFUD_RS10385 PF00768 D-alanyl-D-alanine carboxypeptidase XFUD_RS10385 PF07943 Penicillin-binding protein 5, C-terminal domain XFUD_RS10395 PF00141 Peroxidase XFUD_RS10400 PF00226 DnaJ domain XFUD_RS10400 PF01556 DnaJ C terminal domain XFUD_RS10405 PF00011 Hsp20/alpha crystallin family XFUD_RS10410 PF00905 Penicillin binding protein transpeptidase domain XFUD_RS10410 PF00912 Transglycosylase XFUD_RS10410 PF06832 XFUD_RS10410 XFUD_RS10420 PF00593 TonB dependent receptor XFUD_RS10420 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS10430 PF04542 Sigma-70 region 2 XFUD_RS10430 PF08281 Sigma-70, region 4 XFUD_RS10435 PF03872 Anti sigma-E protein RseA, N-terminal domain XFUD_RS10440 PF13180 PDZ domain XFUD_RS10440 PF13365 Trypsin-like peptidase domain XFUD_RS10445 PF00009 Elongation factor Tu GTP binding domain XFUD_RS10445 PF00679 Elongation factor G C-terminus XFUD_RS10445 PF03144 Elongation factor Tu domain 2 XFUD_RS10445 PF06421 GTP-binding protein LepA C-terminus XFUD_RS10450 PF00717 Peptidase S24-like XFUD_RS10455 PF16137 XFUD_RS10455 XFUD_RS10460 PF00035 Double-stranded RNA binding motif XFUD_RS10460 PF14622 Ribonuclease-III-like XFUD_RS10465 PF01926 50S ribosome-binding GTPase XFUD_RS10465 PF07650 KH domain XFUD_RS10470 PF02565 Recombination protein O C terminal XFUD_RS10470 PF11967 Recombination protein O N terminal XFUD_RS10475 PF02779 Transketolase, pyrimidine binding domain XFUD_RS10475 PF02780 Transketolase, C-terminal domain XFUD_RS10475 PF13292 1-deoxy-D-xylulose-5-phosphate synthase XFUD_RS10480 PF00474 Sodium:solute symporter family XFUD_RS10485 PF04341 XFUD_RS10485 XFUD_RS10490 PF00501 AMP-binding enzyme XFUD_RS10490 PF13193 AMP-binding enzyme C-terminal domain XFUD_RS10490 PF16177 XFUD_RS10490 XFUD_RS10495 PF02659 XFUD_RS10495 XFUD_RS10505 PF13360 PQQ-like domain XFUD_RS10510 PF00326 Prolyl oligopeptidase family XFUD_RS10510 PF07676 WD40-like Beta Propeller Repeat XFUD_RS10515 PF03169 XFUD_RS10515 XFUD_RS10525 PF01266 FAD dependent oxidoreductase XFUD_RS10525 PF16901 XFUD_RS10525 XFUD_RS10530 PF00230 Major intrinsic protein XFUD_RS10535 PF00370 FGGY family of carbohydrate kinases, N-terminal domain XFUD_RS10535 PF02782 FGGY family of carbohydrate kinases, C-terminal domain XFUD_RS10540 PF00106 short chain dehydrogenase XFUD_RS10540 PF13561 Enoyl-(Acyl carrier protein) reductase XFUD_RS10545 PF01263 Aldose 1-epimerase XFUD_RS10555 PF01717 Cobalamin-independent synthase, Catalytic domain XFUD_RS10555 PF08267 Cobalamin-independent synthase, N-terminal domain XFUD_RS10560 PF02677 XFUD_RS10560 XFUD_RS10570 PF00501 AMP-binding enzyme XFUD_RS10575 PF07578 Lipid A Biosynthesis N-terminal domain XFUD_RS10580 PF00535 Glycosyl transferase family 2 XFUD_RS10585 PF01370 NAD dependent epimerase/dehydratase family XFUD_RS10590 PF02195 ParB-like nuclease domain XFUD_RS10595 PF13614 AAA domain XFUD_RS10600 PF00753 Metallo-beta-lactamase superfamily XFUD_RS10605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) XFUD_RS10605 PF02403 Seryl-tRNA synthetase N-terminal domain XFUD_RS10610 PF03544 Gram-negative bacterial TonB protein C-terminal XFUD_RS10615 PF00589 Phage integrase family XFUD_RS10620 PF13986 XFUD_RS10620 XFUD_RS10635 PF08774 VRR-NUC domain XFUD_RS10645 PF04383 KilA-N domain XFUD_RS10650 PF00176 SNF2 family N-terminal domain XFUD_RS10660 PF01451 Low molecular weight phosphotyrosine protein phosphatase XFUD_RS10665 PF02348 Cytidylyltransferase XFUD_RS10670 PF10609 ParA/MinD ATPase like XFUD_RS10675 PF00202 Aminotransferase class-III XFUD_RS10690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily XFUD_RS10695 PF00490 Delta-aminolevulinic acid dehydratase XFUD_RS10720 PF01066 CDP-alcohol phosphatidyltransferase XFUD_RS10725 PF01541 GIY-YIG catalytic domain XFUD_RS10725 PF02151 UvrB/uvrC motif XFUD_RS10725 PF08459 UvrC Helix-hairpin-helix N-terminal XFUD_RS10740 PF00959 Phage lysozyme XFUD_RS10745 PF04865 XFUD_RS10745 XFUD_RS10780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) XFUD_RS10785 PF00800 Prephenate dehydratase XFUD_RS10785 PF01817 Chorismate mutase type II XFUD_RS10785 PF01842 ACT domain XFUD_RS10790 PF00266 Aminotransferase class-V XFUD_RS10795 PF03544 Gram-negative bacterial TonB protein C-terminal XFUD_RS10800 PF12679 XFUD_RS10800 XFUD_RS10805 PF00005 ABC transporter XFUD_RS10810 PF00561 alpha/beta hydrolase fold XFUD_RS10810 PF08386 TAP-like protein XFUD_RS10815 PF00186 Dihydrofolate reductase XFUD_RS10820 PF00303 Thymidylate synthase XFUD_RS10825 PF01790 XFUD_RS10825 XFUD_RS10830 PF01219 Prokaryotic diacylglycerol kinase XFUD_RS10840 PF00072 Response regulator receiver domain XFUD_RS10840 PF00486 Transcriptional regulatory protein, C terminal XFUD_RS10850 PF02153 Prephenate dehydrogenase XFUD_RS10860 PF00012 Hsp70 protein XFUD_RS10865 PF01025 GrpE XFUD_RS10870 PF01628 HrcA protein C terminal domain XFUD_RS10870 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding XFUD_RS10875 PF02463 RecF/RecN/SMC N terminal domain XFUD_RS10880 PF01475 Ferric uptake regulator family XFUD_RS10885 PF04355 SmpA / OmlA family XFUD_RS10890 PF03658 RnfH family Ubiquitin XFUD_RS10895 PF03364 Polyketide cyclase / dehydrase and lipid transport XFUD_RS10900 PF01668 SmpB protein XFUD_RS10910 PF00313 'Cold-shock' DNA-binding domain XFUD_RS10920 PF00156 Phosphoribosyl transferase domain XFUD_RS10930 PF01928 CYTH domain XFUD_RS10935 PF05958 tRNA (Uracil-5-)-methyltransferase XFUD_RS10940 PF00072 Response regulator receiver domain XFUD_RS10940 PF01627 Hpt domain XFUD_RS10945 PF03808 XFUD_RS10945 XFUD_RS10955 PF13440 XFUD_RS10955 XFUD_RS10965 PF00534 Glycosyl transferases group 1 XFUD_RS10965 PF13439 Glycosyltransferase Family 4 XFUD_RS10980 PF02397 XFUD_RS10980 XFUD_RS10980 PF13727 CoA-binding domain XFUD_RS10985 PF02706 Chain length determinant protein XFUD_RS10985 PF13807 XFUD_RS10985 XFUD_RS10990 PF02563 Polysaccharide biosynthesis/export protein XFUD_RS10990 PF10531 SLBB domain XFUD_RS10995 PF00180 Isocitrate/isopropylmalate dehydrogenase XFUD_RS11000 PF00694 Aconitase C-terminal domain XFUD_RS11005 PF00330 Aconitase family (aconitate hydratase) XFUD_RS11025 PF14489 QueF-like protein XFUD_RS11025 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term XFUD_RS11030 PF16576 XFUD_RS11030 XFUD_RS11035 PF00873 AcrB/AcrD/AcrF family XFUD_RS11040 PF00873 AcrB/AcrD/AcrF family XFUD_RS11050 PF00107 Zinc-binding dehydrogenase XFUD_RS11050 PF08240 Alcohol dehydrogenase GroES-like domain XFUD_RS11060 PF01183 Glycosyl hydrolases family 25 XFUD_RS11070 PF00462 Glutaredoxin XFUD_RS11070 PF00581 Rhodanese-like domain XFUD_RS11075 PF01522 Polysaccharide deacetylase XFUD_RS11080 PF00155 Aminotransferase class I and II XFUD_RS11085 PF00005 ABC transporter XFUD_RS11085 PF00664 ABC transporter transmembrane region XFUD_RS11085 PF03412 Peptidase C39 family XFUD_RS11090 PF13437 HlyD family secretion protein XFUD_RS11130 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFUD_RS11130 PF06594 XFUD_RS11130 XFUD_RS11140 PF13087 AAA domain XFUD_RS11140 PF13091 PLD-like domain XFUD_RS11140 PF13245 Part of AAA domain XFUD_RS11145 PF13166 XFUD_RS11145 XFUD_RS11170 PF02401 LytB protein XFUD_RS11175 PF01252 XFUD_RS11175 XFUD_RS11185 PF01687 Riboflavin kinase XFUD_RS11185 PF06574 FAD synthetase XFUD_RS11190 PF03023 XFUD_RS11190 XFUD_RS11195 PF01649 Ribosomal protein S20 XFUD_RS11200 PF01018 GTP1/OBG XFUD_RS11200 PF01926 50S ribosome-binding GTPase XFUD_RS11205 PF01016 Ribosomal L27 protein XFUD_RS11210 PF00829 Ribosomal prokaryotic L21 protein XFUD_RS11230 PF00117 Glutamine amidotransferase class-I XFUD_RS11230 PF00958 GMP synthase C terminal domain XFUD_RS11230 PF02540 NAD synthase XFUD_RS11235 PF00478 IMP dehydrogenase / GMP reductase domain XFUD_RS11235 PF00571 CBS domain XFUD_RS11240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain XFUD_RS11240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain XFUD_RS11245 PF00483 Nucleotidyl transferase XFUD_RS11250 PF02719 Polysaccharide biosynthesis protein XFUD_RS11250 PF13727 CoA-binding domain XFUD_RS11255 PF00953 Glycosyl transferase family 4 XFUD_RS11260 PF13432 Tetratricopeptide repeat XFUD_RS11265 PF06305 XFUD_RS11265 XFUD_RS11270 PF00216 Bacterial DNA-binding protein XFUD_RS11275 PF00575 S1 RNA binding domain XFUD_RS11280 PF02224 Cytidylate kinase XFUD_RS11285 PF00444 Ribosomal protein L36 XFUD_RS11295 PF04371 Porphyromonas-type peptidyl-arginine deiminase XFUD_RS11300 PF00795 Carbon-nitrogen hydrolase XFUD_RS11305 PF01963 XFUD_RS11305 XFUD_RS11310 PF00754 F5/8 type C domain XFUD_RS11310 PF06202 Amylo-alpha-1,6-glucosidase XFUD_RS11315 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component XFUD_RS11325 PF01547 Bacterial extracellular solute-binding protein XFUD_RS11330 PF10091 Putative glucoamylase XFUD_RS11335 PF01722 BolA-like protein XFUD_RS11345 PF02616 ScpA/B protein XFUD_RS11350 PF04079 Putative transcriptional regulators (Ypuh-like) XFUD_RS11355 PF00849 RNA pseudouridylate synthase XFUD_RS11355 PF01479 S4 domain XFUD_RS11365 PF00795 Carbon-nitrogen hydrolase XFUD_RS11370 PF00155 Aminotransferase class I and II XFUD_RS11375 PF00005 ABC transporter XFUD_RS11380 PF03379 XFUD_RS11380 XFUD_RS11385 PF01578 XFUD_RS11385 XFUD_RS11390 PF04995 XFUD_RS11390 XFUD_RS11395 PF03100 CcmE XFUD_RS11400 PF01578 XFUD_RS11400 XFUD_RS11400 PF16327 XFUD_RS11400 XFUD_RS11405 PF08534 Redoxin XFUD_RS11410 PF03918 Cytochrome C biogenesis protein XFUD_RS11415 PF13432 Tetratricopeptide repeat XFUD_RS11415 PF14559 Tetratricopeptide repeat XFUD_RS11425 PF00561 alpha/beta hydrolase fold XFUD_RS11445 PF13419 Haloacid dehalogenase-like hydrolase XFUD_RS11450 PF13489 Methyltransferase domain XFUD_RS11455 PF01979 Amidohydrolase family XFUD_RS11460 PF01132 Elongation factor P (EF-P) OB domain XFUD_RS11460 PF08207 Elongation factor P (EF-P) KOW-like domain XFUD_RS11460 PF09285 Elongation factor P, C-terminal XFUD_RS11465 PF13394 4Fe-4S single cluster domain XFUD_RS11470 PF00588 SpoU rRNA Methylase family XFUD_RS11475 PF00459 Inositol monophosphatase family XFUD_RS11480 PF13500 AAA domain XFUD_RS11485 PF00589 Phage integrase family XFUD_RS11490 PF05954 Phage late control gene D protein (GPD) XFUD_RS11495 PF05489 Phage Tail Protein X XFUD_RS11500 PF06995 XFUD_RS11500 XFUD_RS11505 PF10145 XFUD_RS11505 XFUD_RS11510 PF10109 XFUD_RS11510 XFUD_RS11515 PF04985 XFUD_RS11515 XFUD_RS11520 PF04984 Phage tail sheath protein XFUD_RS11530 PF09684 XFUD_RS11530 XFUD_RS11535 PF04865 XFUD_RS11535 XFUD_RS11540 PF04965 Gene 25-like lysozyme XFUD_RS11545 PF15723 XFUD_RS11545 XFUD_RS11550 PF15731 XFUD_RS11550 XFUD_RS11555 PF04717 Phage-related baseplate assembly protein XFUD_RS11555 PF06890 Bacteriophage Mu Gp45 protein XFUD_RS11580 PF04586 XFUD_RS11580 XFUD_RS11580 PF05065 Phage capsid family XFUD_RS11585 PF05136 XFUD_RS11585 XFUD_RS11595 PF05876 XFUD_RS11595 XFUD_RS11600 PF07471 Phage DNA packaging protein Nu1 XFUD_RS11615 PF16083 XFUD_RS11615 XFUD_RS11620 PF00959 Phage lysozyme XFUD_RS11630 PF03288 Poxvirus D5 protein-like XFUD_RS11630 PF08706 XFUD_RS11630 XFUD_RS11635 PF02498 XFUD_RS11635 XFUD_RS11665 PF00717 Peptidase S24-like XFUD_RS11665 PF01381 Helix-turn-helix XFUD_RS11725 PF10926 XFUD_RS11725 XFUD_RS11730 PF10991 Protein of unknown function (DUF2815) XFUD_RS11735 PF02498 XFUD_RS11735 XFUD_RS11740 PF00476 DNA polymerase family A XFUD_RS11745 PF08774 VRR-NUC domain XFUD_RS11755 PF00176 SNF2 family N-terminal domain XFUD_RS11760 PF13986 XFUD_RS11760 XFUD_RS11765 PF00589 Phage integrase family XFUD_RS11785 PF00072 Response regulator receiver domain XFUD_RS11785 PF00486 Transcriptional regulatory protein, C terminal XFUD_RS11790 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS11790 PF00672 HAMP domain XFUD_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS11795 PF01121 Dephospho-CoA kinase XFUD_RS11800 PF01478 Type IV leader peptidase family XFUD_RS11800 PF06750 XFUD_RS11800 XFUD_RS11805 PF00482 Type II secretion system (T2SS), protein F XFUD_RS11810 PF00114 Pilin (bacterial filament) XFUD_RS11810 PF13633 Prokaryotic N-terminal methylation site XFUD_RS11820 PF00114 Pilin (bacterial filament) XFUD_RS11820 PF13633 Prokaryotic N-terminal methylation site XFUD_RS11830 PF00437 Type II/IV secretion system protein XFUD_RS11830 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain XFUD_RS11835 PF00072 Response regulator receiver domain XFUD_RS11835 PF00158 Sigma-54 interaction domain XFUD_RS11835 PF02954 Bacterial regulatory protein, Fis family XFUD_RS11840 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS11845 PF00549 CoA-ligase XFUD_RS11845 PF08442 ATP-grasp domain XFUD_RS11850 PF00549 CoA-ligase XFUD_RS11850 PF02629 CoA binding domain XFUD_RS11860 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB XFUD_RS11860 PF08479 POTRA domain, ShlB-type XFUD_RS11865 PF00326 Prolyl oligopeptidase family XFUD_RS11870 PF00521 DNA gyrase/topoisomerase IV, subunit A XFUD_RS11870 PF03989 DNA gyrase C-terminal domain, beta-propeller XFUD_RS11875 PF01008 Initiation factor 2 subunit family XFUD_RS11880 PF11218 XFUD_RS11880 XFUD_RS11885 PF00152 tRNA synthetases class II (D, K and N) XFUD_RS11890 PF00583 Acetyltransferase (GNAT) family XFUD_RS11895 PF00533 BRCA1 C Terminus (BRCT) domain XFUD_RS11895 PF01653 NAD-dependent DNA ligase adenylation domain XFUD_RS11895 PF03119 NAD-dependent DNA ligase C4 zinc finger domain XFUD_RS11895 PF03120 NAD-dependent DNA ligase OB-fold domain XFUD_RS11895 PF12826 Helix-hairpin-helix motif XFUD_RS11900 PF04354 ZipA, C-terminal FtsZ-binding domain XFUD_RS11905 PF02463 RecF/RecN/SMC N terminal domain XFUD_RS11905 PF06470 SMC proteins Flexible Hinge Domain XFUD_RS11910 PF01281 Ribosomal protein L9, N-terminal domain XFUD_RS11910 PF03948 Ribosomal protein L9, C-terminal domain XFUD_RS11915 PF01084 Ribosomal protein S18 XFUD_RS11920 PF01250 Ribosomal protein S6 XFUD_RS11925 PF01521 Iron-sulphur cluster biosynthesis XFUD_RS11930 PF00152 tRNA synthetases class II (D, K and N) XFUD_RS11930 PF01336 OB-fold nucleic acid binding domain XFUD_RS11940 PF01061 XFUD_RS11940 XFUD_RS11945 PF00005 ABC transporter XFUD_RS11955 PF13828 XFUD_RS11955 XFUD_RS11960 PF01180 Dihydroorotate dehydrogenase XFUD_RS11965 PF01565 FAD binding domain XFUD_RS11965 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain XFUD_RS11970 PF00892 EamA-like transporter family XFUD_RS11980 PF04551 GcpE protein XFUD_RS11990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS11995 PF00072 Response regulator receiver domain XFUD_RS11995 PF02954 Bacterial regulatory protein, Fis family XFUD_RS12000 PF00889 Elongation factor TS XFUD_RS12005 PF00318 Ribosomal protein S2 XFUD_RS12015 PF00005 ABC transporter XFUD_RS12015 PF00664 ABC transporter transmembrane region XFUD_RS12025 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) XFUD_RS12030 PF02321 Outer membrane efflux protein XFUD_RS12035 PF12850 Calcineurin-like phosphoesterase superfamily domain XFUD_RS12045 PF02541 Ppx/GppA phosphatase family XFUD_RS12050 PF02503 Polyphosphate kinase middle domain XFUD_RS12050 PF13089 Polyphosphate kinase N-terminal domain XFUD_RS12050 PF13090 Polyphosphate kinase C-terminal domain XFUD_RS12055 PF00512 His Kinase A (phospho-acceptor) domain XFUD_RS12055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase XFUD_RS12055 PF11808 XFUD_RS12055 XFUD_RS12055 PF13188 PAS domain XFUD_RS12060 PF00072 Response regulator receiver domain XFUD_RS12060 PF00486 Transcriptional regulatory protein, C terminal XFUD_RS12065 PF01435 Peptidase family M48 XFUD_RS12070 PF00462 Glutaredoxin XFUD_RS12075 PF00180 Isocitrate/isopropylmalate dehydrogenase XFUD_RS12080 PF13211 XFUD_RS12080 XFUD_RS12085 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain XFUD_RS12085 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain XFUD_RS12090 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase XFUD_RS12095 PF00037 4Fe-4S binding domain XFUD_RS12095 PF11953 Domain of unknown function (DUF3470) XFUD_RS12105 PF01106 NifU-like domain XFUD_RS12110 PF01329 Pterin 4 alpha carbinolamine dehydratase XFUD_RS12115 PF03544 Gram-negative bacterial TonB protein C-terminal XFUD_RS12120 PF00849 RNA pseudouridylate synthase XFUD_RS12120 PF01479 S4 domain XFUD_RS12125 PF00575 S1 RNA binding domain XFUD_RS12125 PF10150 Ribonuclease E/G family XFUD_RS12130 PF00072 Response regulator receiver domain XFUD_RS12130 PF00196 Bacterial regulatory proteins, luxR family XFUD_RS12140 PF00072 Response regulator receiver domain XFUD_RS12150 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain XFUD_RS12150 PF02777 Iron/manganese superoxide dismutases, C-terminal domain XFUD_RS12155 PF00545 ribonuclease XFUD_RS12160 PF01337 Barstar (barnase inhibitor) XFUD_RS12165 PF00005 ABC transporter XFUD_RS12165 PF12848 ABC transporter XFUD_RS12165 PF16326 XFUD_RS12165 XFUD_RS12175 PF02696 XFUD_RS12175 XFUD_RS12180 PF00313 'Cold-shock' DNA-binding domain XFUD_RS12185 PF00563 EAL domain XFUD_RS12185 PF00989 PAS fold XFUD_RS12185 PF00990 GGDEF domain XFUD_RS12190 PF01435 Peptidase family M48 XFUD_RS12200 PF00009 Elongation factor Tu GTP binding domain XFUD_RS12200 PF03143 Elongation factor Tu C-terminal domain XFUD_RS12200 PF03144 Elongation factor Tu domain 2 XFUD_RS12205 PF00009 Elongation factor Tu GTP binding domain XFUD_RS12205 PF00679 Elongation factor G C-terminus XFUD_RS12205 PF03144 Elongation factor Tu domain 2 XFUD_RS12205 PF03764 Elongation factor G, domain IV XFUD_RS12205 PF14492 Elongation Factor G, domain II XFUD_RS12210 PF00177 Ribosomal protein S7p/S5e XFUD_RS12215 PF00164 Ribosomal protein S12/S23 XFUD_RS12220 PF00623 RNA polymerase Rpb1, domain 2 XFUD_RS12220 PF04983 RNA polymerase Rpb1, domain 3 XFUD_RS12220 PF04997 RNA polymerase Rpb1, domain 1 XFUD_RS12220 PF04998 RNA polymerase Rpb1, domain 5 XFUD_RS12220 PF05000 RNA polymerase Rpb1, domain 4 XFUD_RS12225 PF00562 RNA polymerase Rpb2, domain 6 XFUD_RS12225 PF04560 RNA polymerase Rpb2, domain 7 XFUD_RS12225 PF04561 RNA polymerase Rpb2, domain 2 XFUD_RS12225 PF04563 RNA polymerase beta subunit XFUD_RS12225 PF04565 RNA polymerase Rpb2, domain 3 XFUD_RS12225 PF10385 RNA polymerase beta subunit external 1 domain XFUD_RS12230 PF00542 Ribosomal protein L7/L12 C-terminal domain XFUD_RS12230 PF16320 XFUD_RS12230 XFUD_RS12235 PF00466 Ribosomal protein L10 XFUD_RS12240 PF00687 Ribosomal protein L1p/L10e family XFUD_RS12245 PF00298 Ribosomal protein L11, RNA binding domain XFUD_RS12245 PF03946 Ribosomal protein L11, N-terminal domain XFUD_RS12250 PF00467 KOW motif XFUD_RS12250 PF02357 Transcription termination factor nusG XFUD_RS12255 PF00584 SecE/Sec61-gamma subunits of protein translocation complex XFUD_RS12265 PF00009 Elongation factor Tu GTP binding domain XFUD_RS12265 PF03143 Elongation factor Tu C-terminal domain XFUD_RS12265 PF03144 Elongation factor Tu domain 2 XFUD_RS12285 PF01926 50S ribosome-binding GTPase XFUD_RS12285 PF06071 Protein of unknown function (DUF933) XFUD_RS12290 PF01195 Peptidyl-tRNA hydrolase XFUD_RS12295 PF01386 Ribosomal L25p family XFUD_RS12295 PF14693 Ribosomal protein TL5, C-terminal domain XFUD_RS12300 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase XFUD_RS12300 PF14572 Phosphoribosyl synthetase-associated domain XFUD_RS12310 PF00288 GHMP kinases N terminal domain XFUD_RS12310 PF08544 GHMP kinases C terminal XFUD_RS12315 PF03550 Outer membrane lipoprotein LolB XFUD_RS12325 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain XFUD_RS12325 PF01488 Shikimate / quinate 5-dehydrogenase XFUD_RS12325 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain XFUD_RS12330 PF00472 RF-1 domain XFUD_RS12330 PF03462 PCRF domain XFUD_RS12340 PF01170 Putative RNA methylase family UPF0020 XFUD_RS12340 PF02926 THUMP domain XFUD_RS12340 PF10672 S-adenosylmethionine-dependent methyltransferase XFUD_RS12360 PF01510 N-acetylmuramoyl-L-alanine amidase XFUD_RS12390 PF10053 XFUD_RS12390 XFUD_RS12395 PF01914 XFUD_RS12395 XFUD_RS12405 PF00462 Glutaredoxin XFUD_RS12410 PF02222 ATP-grasp domain XFUD_RS12415 PF00731 AIR carboxylase XFUD_RS12420 PF03966 Trm112p-like protein XFUD_RS12430 PF10030 XFUD_RS12430 XFUD_RS12435 PF07731 Multicopper oxidase XFUD_RS12435 PF07732 Multicopper oxidase XFUD_RS12440 PF06057 Bacterial virulence protein (VirJ) XFUD_RS12445 PF00580 UvrD/REP helicase N-terminal domain XFUD_RS12445 PF13361 UvrD-like helicase C-terminal domain XFUD_RS12450 PF04349 Periplasmic glucan biosynthesis protein, MdoG XFUD_RS12455 PF01343 Peptidase family S49 XFUD_RS12460 PF01554 MatE XFUD_RS12470 PF11304 XFUD_RS12470 XFUD_RS12480 PF00270 DEAD/DEAH box helicase XFUD_RS12480 PF00271 Helicase conserved C-terminal domain XFUD_RS12485 PF04542 Sigma-70 region 2 XFUD_RS12485 PF04545 Sigma-70, region 4 XFUD_RS12490 PF03167 Uracil DNA glycosylase superfamily XFUD_RS12495 PF00072 Response regulator receiver domain XFUD_RS12505 PF00005 ABC transporter XFUD_RS12510 PF00270 DEAD/DEAH box helicase XFUD_RS12510 PF00271 Helicase conserved C-terminal domain XFUD_RS12510 PF12300 XFUD_RS12510 XFUD_RS12515 PF00085 Thioredoxin XFUD_RS12520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain XFUD_RS12520 PF07497 Rho termination factor, RNA-binding domain XFUD_RS12520 PF07498 Rho termination factor, N-terminal domain XFUD_RS12525 PF03971 Monomeric isocitrate dehydrogenase XFUD_RS12535 PF03572 Peptidase family S41 XFUD_RS12535 PF13180 PDZ domain XFUD_RS12540 PF01551 Peptidase family M23 XFUD_RS12545 PF04389 Peptidase family M28 XFUD_RS12555 PF00150 Cellulase (glycosyl hydrolase family 5) XFUD_RS12560 PF07992 Pyridine nucleotide-disulphide oxidoreductase XFUD_RS12560 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster XFUD_RS12565 PF00310 Glutamine amidotransferases class-II XFUD_RS12565 PF01493 GXGXG motif XFUD_RS12565 PF01645 Conserved region in glutamate synthase XFUD_RS12565 PF04898 Glutamate synthase central domain XFUD_RS12575 PF03807 NADP oxidoreductase coenzyme F420-dependent XFUD_RS12575 PF14748 Pyrroline-5-carboxylate reductase dimerisation XFUD_RS12580 PF00593 TonB dependent receptor XFUD_RS12580 PF07715 TonB-dependent Receptor Plug Domain XFUD_RS12595 PF00440 Bacterial regulatory proteins, tetR family XFUD_RS12600 PF00106 short chain dehydrogenase XFUD_RS12625 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFUD_RS12625 PF04851 Type III restriction enzyme, res subunit XFUD_RS12630 PF01420 Type I restriction modification DNA specificity domain XFUD_RS12640 PF07510 XFUD_RS12640 XFUD_RS12645 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFUD_RS12645 PF04851 Type III restriction enzyme, res subunit XFUD_RS12645 PF12008 Type I restriction and modification enzyme - subunit R C terminal XFUD_RS12650 PF01420 Type I restriction modification DNA specificity domain XFUD_RS12660 PF02384 N-6 DNA Methylase XFUD_RS12660 PF12161 HsdM N-terminal domain XFUD_RS12665 PF01810 XFUD_RS12665 XFUD_RS12680 PF11855 XFUD_RS12680 XFUD_RS12685 PF13835 XFUD_RS12685 XFUD_RS12690 PF13555 P-loop containing region of AAA domain XFUD_RS12690 PF13558 Putative exonuclease SbcCD, C subunit XFUD_RS12695 PF09983 XFUD_RS12695 XFUD_RS12695 PF11795 XFUD_RS12695 XFUD_RS12710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) XFUD_RS12710 PF04851 Type III restriction enzyme, res subunit XFUD_RS12710 PF11867 XFUD_RS12710 XFUD_RS12720 PF01420 Type I restriction modification DNA specificity domain XFUD_RS12725 PF02384 N-6 DNA Methylase XFUD_RS12725 PF12161 HsdM N-terminal domain XFUD_RS12740 PF05590 XFUD_RS12740 XFUD_RS12800 PF00353 Hemolysin-type calcium-binding repeat (2 copies) XFUD_RS12800 PF06594 XFUD_RS12800 XFUD_RS12805 PF12811 XFUD_RS12805 XFUD_RS12845 PF05973 XFUD_RS12845 XFUD_RS12870 PF04591 Protein of unknown function, DUF596 XFUD_RS12875 PF05590 XFUD_RS12875 XFUD_RS12880 PF04591 Protein of unknown function, DUF596 XFUD_RS12885 PF05590 XFUD_RS12885 XFUD_RS12890 PF04830 XFUD_RS12890 XFUD_RS12895 PF04591 Protein of unknown function, DUF596 XFUD_RS12915 PF01926 50S ribosome-binding GTPase XFUD_RS12915 PF10396 GTP-binding protein TrmE N-terminus XFUD_RS12915 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE XFUD_RS12920 PF00656 Caspase domain XFUD_RS12920 PF01522 Polysaccharide deacetylase XFUD_RS12930 PF00825 Ribonuclease P XFUD_RS12935 PF00468 Ribosomal protein L34 XFUD_RS12940 PF01381 Helix-turn-helix XFUD_RS12945 PF01464 Transglycosylase SLT domain XFUD_RS12950 PF01131 DNA topoisomerase XFUD_RS12950 PF01396 XFUD_RS12950 XFUD_RS12950 PF01751 Toprim domain XFUD_RS12960 PF04956 XFUD_RS12960 XFUD_RS12965 PF05101 XFUD_RS12965 XFUD_RS12970 PF03135 XFUD_RS12970 XFUD_RS12975 PF07996 Type IV secretion system proteins XFUD_RS12990 PF04610 XFUD_RS12990 XFUD_RS13000 PF04335 VirB8 protein XFUD_RS13005 PF03524 Conjugal transfer protein XFUD_RS13010 PF03743 Bacterial conjugation TrbI-like protein XFUD_RS13015 PF00437 Type II/IV secretion system protein XFUD_RS13020 PF02534 Type IV secretory system Conjugative DNA transfer XFUD_RS13045 PF00239 Resolvase, N terminal domain XFUD_RS13045 PF02796 Helix-turn-helix domain of resolvase XFUD_RS13055 PF13470 XFUD_RS13055 XFUD_RS13060 PF16762 XFUD_RS13060 XFUD_RS13065 PF08681 Protein of unknown function (DUF1778) XFUD_RS13070 PF13508 Acetyltransferase (GNAT) domain XFUD_RS13075 PF13828 XFUD_RS13075 XFUD_RS13080 PF02452 PemK-like protein XFUD_RS13095 PF05016 Plasmid stabilisation system protein XFUD_RS13110 PF12697 Alpha/beta hydrolase family XFUD_RS13120 PF05973 XFUD_RS13120 XFUD_RS13125 PF13744 Helix-turn-helix domain XFUD_RS13135 PF04610 XFUD_RS13135 XFUD_RS13150 PF03743 Bacterial conjugation TrbI-like protein XFUD_RS13155 PF07283 XFUD_RS13155 XFUD_RS13160 PF03524 Conjugal transfer protein XFUD_RS13165 PF04335 VirB8 protein XFUD_RS13190 PF03432 XFUD_RS13190 XFUD_RS13195 PF05713 XFUD_RS13195 XFUD_RS13215 PF09827 CRISPR associated protein Cas2 XFUD_RS13230 PF13708 XFUD_RS13230 XFUD_RS13240 PF16509 XFUD_RS13240 XFUD_RS13250 PF02195 ParB-like nuclease domain XFUD_RS13250 PF08535 KorB domain XFUD_RS13255 PF13614 AAA domain XFUD_RS13260 PF00436 Single-strand binding protein family XFUD_RS13265 PF12083 XFUD_RS13265