locus-tag class description D1605_RS00005 PF00308 Bacterial dnaA protein D1605_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix D1605_RS00005 PF11638 DnaA N-terminal domain D1605_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain D1605_RS00010 PF02767 DNA polymerase III beta subunit, central domain D1605_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain D1605_RS00015 PF02463 RecF/RecN/SMC N terminal domain D1605_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS00020 PF01751 Toprim domain D1605_RS00020 PF00204 DNA gyrase B D1605_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus D1605_RS00020 PF18053 DNA gyrase B subunit insert domain D1605_RS00030 PF01435 Peptidase family M48 D1605_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal D1605_RS00045 PF01618 MotA/TolQ/ExbB proton channel family D1605_RS00050 PF02472 Biopolymer transport protein ExbD/TolR D1605_RS00055 PF02472 Biopolymer transport protein ExbD/TolR D1605_RS00060 PF07676 WD40-like Beta Propeller Repeat D1605_RS00060 PF00326 Prolyl oligopeptidase family D1605_RS00070 PF01218 Coproporphyrinogen III oxidase D1605_RS00090 PF00793 DAHP synthetase I family D1605_RS00115 PF05567 Neisseria PilC beta-propeller domain D1605_RS00125 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family D1605_RS00130 PF00155 Aminotransferase class I and II D1605_RS00135 PF01741 Large-conductance mechanosensitive channel, MscL D1605_RS00145 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ D1605_RS00155 PF02559 CarD-like/TRCF domain D1605_RS00155 PF00270 DEAD/DEAH box helicase D1605_RS00155 PF00271 Helicase conserved C-terminal domain D1605_RS00155 PF03461 TRCF domain D1605_RS00155 PF17757 UvrB interaction domain D1605_RS00160 PF01220 Dehydroquinase class II D1605_RS00165 PF00364 Biotin-requiring enzyme D1605_RS00170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1605_RS00170 PF00289 Biotin carboxylase, N-terminal domain D1605_RS00170 PF02785 Biotin carboxylase C-terminal domain D1605_RS00175 PF00580 UvrD/REP helicase N-terminal domain D1605_RS00175 PF13361 UvrD-like helicase C-terminal domain D1605_RS00180 PF00175 Oxidoreductase NAD-binding domain D1605_RS00180 PF00970 Oxidoreductase FAD-binding domain D1605_RS00180 PF00042 Globin D1605_RS00190 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ D1605_RS00195 PF02195 ParB-like nuclease domain D1605_RS00195 PF06613 KorB C-terminal beta-barrel domain D1605_RS00195 PF08535 KorB domain D1605_RS00205 PF00156 Phosphoribosyl transferase domain D1605_RS00210 PF04055 Radical SAM superfamily D1605_RS00210 PF06968 Biotin and Thiamin Synthesis associated domain D1605_RS00215 PF01734 Patatin-like phospholipase D1605_RS00220 PF01040 UbiA prenyltransferase family D1605_RS00255 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1605_RS00255 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1605_RS00260 PF01578 Cytochrome C assembly protein D1605_RS00265 PF00448 SRP54-type protein, GTPase domain D1605_RS00265 PF02881 SRP54-type protein, helical bundle domain D1605_RS00265 PF02978 Signal peptide binding domain D1605_RS00285 PF13953 PapC C-terminal domain D1605_RS00285 PF13954 PapC N-terminal domain D1605_RS00285 PF00577 Outer membrane usher protein D1605_RS00290 PF02753 Pili assembly chaperone PapD, C-terminal domain D1605_RS00290 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain D1605_RS00295 PF16970 Type-1 fimbrial protein, A D1605_RS00305 PF02464 Competence-damaged protein D1605_RS00310 PF00083 Sugar (and other) transporter D1605_RS00315 PF16360 GTP-binding GTPase Middle Region D1605_RS00315 PF13167 GTP-binding GTPase N-terminal D1605_RS00315 PF01926 50S ribosome-binding GTPase D1605_RS00320 PF17209 Hfq protein D1605_RS00330 PF00809 Pterin binding enzyme D1605_RS00335 PF06480 FtsH Extracellular D1605_RS00335 PF01434 Peptidase family M41 D1605_RS00335 PF17862 AAA+ lid domain D1605_RS00335 PF00004 ATPase family associated with various cellular activities (AAA) D1605_RS00340 PF01728 FtsJ-like methyltransferase D1605_RS00345 PF01985 CRS1 / YhbY (CRM) domain D1605_RS00355 PF00920 Dehydratase family D1605_RS00375 PF03279 Bacterial lipid A biosynthesis acyltransferase D1605_RS00380 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) D1605_RS00390 PF00886 Ribosomal protein S16 D1605_RS00395 PF05239 PRC-barrel domain D1605_RS00395 PF01782 RimM N-terminal domain D1605_RS00400 PF01746 tRNA (Guanine-1)-methyltransferase D1605_RS00405 PF01245 Ribosomal protein L19 D1605_RS00410 PF00557 Metallopeptidase family M24 D1605_RS00415 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal D1605_RS00415 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_RS00415 PF14602 Hexapeptide repeat of succinyl-transferase D1605_RS00420 PF03960 ArsC family D1605_RS00425 PF07687 Peptidase dimerisation domain D1605_RS00425 PF01546 Peptidase family M20/M25/M40 D1605_RS00430 PF00733 Asparagine synthase D1605_RS00430 PF13537 Glutamine amidotransferase domain D1605_RS00440 PF03060 Nitronate monooxygenase D1605_RS00445 PF00717 Peptidase S24-like D1605_RS00445 PF01726 LexA DNA binding domain D1605_RS00450 PF00154 recA bacterial DNA recombination protein D1605_RS00455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1605_RS00455 PF02272 DHHA1 domain D1605_RS00455 PF01411 tRNA synthetases class II (A) D1605_RS00460 PF02599 Global regulator protein family D1605_RS00470 PF01432 Peptidase family M3 D1605_RS00485 PF07732 Multicopper oxidase D1605_RS00485 PF07731 Multicopper oxidase D1605_RS00485 PF00394 Multicopper oxidase D1605_RS00490 PF05275 Copper resistance protein B precursor (CopB) D1605_RS00495 PF08264 Anticodon-binding domain of tRNA D1605_RS00495 PF10458 Valyl tRNA synthetase tRNA binding arm D1605_RS00495 PF00133 tRNA synthetases class I (I, L, M and V) D1605_RS00510 PF00883 Cytosol aminopeptidase family, catalytic domain D1605_RS00510 PF02789 Cytosol aminopeptidase family, N-terminal domain D1605_RS00515 PF03739 Lipopolysaccharide export system permease LptF/LptG D1605_RS00530 PF01380 SIS domain D1605_RS00540 PF17284 Spermidine synthase tetramerisation domain D1605_RS00545 PF17810 Arginine decarboxylase helical bundle domain D1605_RS00545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1605_RS00545 PF17944 Arginine decarboxylase C-terminal helical extension D1605_RS00550 PF00106 short chain dehydrogenase D1605_RS00560 PF03485 Arginyl tRNA synthetase N terminal domain D1605_RS00560 PF00750 tRNA synthetases class I (R) D1605_RS00560 PF05746 DALR anticodon binding domain D1605_RS00565 PF04002 RadC-like JAB domain D1605_RS00570 PF02441 Flavoprotein D1605_RS00570 PF04127 DNA / pantothenate metabolism flavoprotein D1605_RS00575 PF00692 dUTPase D1605_RS00590 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1605_RS00590 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1605_RS00590 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1605_RS00590 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1605_RS00600 PF00156 Phosphoribosyl transferase domain D1605_RS00640 PF07690 Major Facilitator Superfamily D1605_RS00645 PF03702 Anhydro-N-acetylmuramic acid kinase D1605_RS00650 PF01551 Peptidase family M23 D1605_RS00650 PF04225 Opacity-associated protein A LysM-like domain D1605_RS00655 PF00579 tRNA synthetases class I (W and Y) D1605_RS00685 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain D1605_RS00685 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain D1605_RS00690 PF01578 Cytochrome C assembly protein D1605_RS00705 PF16658 Class II release factor RF3, C-terminal domain D1605_RS00705 PF00009 Elongation factor Tu GTP binding domain D1605_RS00710 PF03006 Haemolysin-III related D1605_RS00715 PF00535 Glycosyl transferase family 2 D1605_RS00720 PF01026 TatD related DNase D1605_RS00735 PF01597 Glycine cleavage H-protein D1605_RS00740 PF08669 Glycine cleavage T-protein C-terminal barrel domain D1605_RS00740 PF01571 Aminomethyltransferase folate-binding domain D1605_RS00750 PF01145 SPFH domain / Band 7 family D1605_RS00750 PF16200 C-terminal region of band_7 D1605_RS00755 PF03819 MazG nucleotide pyrophosphohydrolase domain D1605_RS00760 PF00459 Inositol monophosphatase family D1605_RS00765 PF00293 NUDIX domain D1605_RS00770 PF00202 Aminotransferase class-III D1605_RS00775 PF04452 RNA methyltransferase D1605_RS00780 PF00270 DEAD/DEAH box helicase D1605_RS00780 PF00271 Helicase conserved C-terminal domain D1605_RS00785 PF01242 6-pyruvoyl tetrahydropterin synthase D1605_RS00810 PF03653 Uncharacterised protein family (UPF0093) D1605_RS00815 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit D1605_RS00820 PF14579 Helix-hairpin-helix motif D1605_RS00820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain D1605_RS00820 PF02811 PHP domain D1605_RS00820 PF01336 OB-fold nucleic acid binding domain D1605_RS00820 PF07733 Bacterial DNA polymerase III alpha NTPase domain D1605_RS00825 PF01259 SAICAR synthetase D1605_RS00830 PF00684 DnaJ central domain D1605_RS00830 PF01556 DnaJ C terminal domain D1605_RS00830 PF00226 DnaJ domain D1605_RS00835 PF00834 Ribulose-phosphate 3 epimerase family D1605_RS00840 PF04715 Anthranilate synthase component I, N terminal region D1605_RS00840 PF00425 chorismate binding enzyme D1605_RS00845 PF00117 Glutamine amidotransferase class-I D1605_RS00850 PF02885 Glycosyl transferase family, helical bundle domain D1605_RS00850 PF00591 Glycosyl transferase family, a/b domain D1605_RS00855 PF00218 Indole-3-glycerol phosphate synthase D1605_RS00880 PF00557 Metallopeptidase family M24 D1605_RS00880 PF01321 Creatinase/Prolidase N-terminal domain D1605_RS00895 PF01702 Queuine tRNA-ribosyltransferase D1605_RS00900 PF02699 Preprotein translocase subunit D1605_RS00905 PF07549 SecD/SecF GG Motif D1605_RS00905 PF13721 SecD export protein N-terminal TM region D1605_RS00905 PF02355 Protein export membrane protein D1605_RS00910 PF07549 SecD/SecF GG Motif D1605_RS00910 PF02355 Protein export membrane protein D1605_RS00920 PF12626 Polymerase A arginine-rich C-terminus D1605_RS00920 PF12627 Probable RNA and SrmB- binding site of polymerase A D1605_RS00920 PF01743 Poly A polymerase head domain D1605_RS00925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1605_RS00930 PF02548 Ketopantoate hydroxymethyltransferase D1605_RS00935 PF02569 Pantoate-beta-alanine ligase D1605_RS00940 PF02261 Aspartate decarboxylase D1605_RS00945 PF00342 Phosphoglucose isomerase D1605_RS00955 PF17384 RimP C-terminal SH3 domain D1605_RS00955 PF02576 RimP N-terminal domain D1605_RS00960 PF00575 S1 RNA binding domain D1605_RS00960 PF08529 NusA N-terminal domain D1605_RS00960 PF13184 NusA-like KH domain D1605_RS00965 PF04760 Translation initiation factor IF-2, N-terminal region D1605_RS00965 PF00009 Elongation factor Tu GTP binding domain D1605_RS00965 PF11987 Translation-initiation factor 2 D1605_RS00965 PF08364 Bacterial translation initiation factor IF-2 associated region D1605_RS00970 PF02033 Ribosome-binding factor A D1605_RS00975 PF09157 Pseudouridine synthase II TruB, C-terminal D1605_RS00975 PF01509 TruB family pseudouridylate synthase (N terminal domain) D1605_RS00975 PF16198 tRNA pseudouridylate synthase B C-terminal domain D1605_RS00980 PF00312 Ribosomal protein S15 D1605_RS00985 PF00575 S1 RNA binding domain D1605_RS00985 PF03725 3' exoribonuclease family, domain 2 D1605_RS00985 PF01138 3' exoribonuclease family, domain 1 D1605_RS00985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain D1605_RS00985 PF00013 KH domain D1605_RS00990 PF01638 HxlR-like helix-turn-helix D1605_RS00995 PF05368 NmrA-like family D1605_RS01005 PF00873 AcrB/AcrD/AcrF family D1605_RS01025 PF00271 Helicase conserved C-terminal domain D1605_RS01025 PF00270 DEAD/DEAH box helicase D1605_RS01025 PF03880 DbpA RNA binding domain D1605_RS01035 PF00766 Electron transfer flavoprotein FAD-binding domain D1605_RS01035 PF01012 Electron transfer flavoprotein domain D1605_RS01040 PF01012 Electron transfer flavoprotein domain D1605_RS01045 PF16363 GDP-mannose 4,6 dehydratase D1605_RS01050 PF00483 Nucleotidyl transferase D1605_RS01055 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase D1605_RS01060 PF04321 RmlD substrate binding domain D1605_RS01065 PF00483 Nucleotidyl transferase D1605_RS01065 PF01050 Mannose-6-phosphate isomerase D1605_RS01070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1605_RS01070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1605_RS01070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1605_RS01070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1605_RS01090 PF03797 Autotransporter beta-domain D1605_RS01090 PF12951 Passenger-associated-transport-repeat D1605_RS01090 PF00082 Subtilase family D1605_RS01100 PF06779 Uncharacterised MFS-type transporter YbfB D1605_RS01110 PF00365 Phosphofructokinase D1605_RS01120 PF08245 Mur ligase middle domain D1605_RS01120 PF02875 Mur ligase family, glutamate ligase domain D1605_RS01120 PF01225 Mur ligase family, catalytic domain D1605_RS01125 PF01569 PAP2 superfamily D1605_RS01140 PF02789 Cytosol aminopeptidase family, N-terminal domain D1605_RS01140 PF00883 Cytosol aminopeptidase family, catalytic domain D1605_RS01145 PF01594 AI-2E family transporter D1605_RS01165 PF00595 PDZ domain D1605_RS01170 PF08338 Domain of unknown function (DUF1731) D1605_RS01170 PF01370 NAD dependent epimerase/dehydratase family D1605_RS01175 PF00501 AMP-binding enzyme D1605_RS01175 PF13193 AMP-binding enzyme C-terminal domain D1605_RS01180 PF00694 Aconitase C-terminal domain D1605_RS01180 PF00330 Aconitase family (aconitate hydratase) D1605_RS01195 PF11791 Aconitate B N-terminal domain D1605_RS01195 PF06434 Aconitate hydratase 2 N-terminus D1605_RS01195 PF00330 Aconitase family (aconitate hydratase) D1605_RS01240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_RS01250 PF00121 Triosephosphate isomerase D1605_RS01265 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 D1605_RS01270 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit D1605_RS01275 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit D1605_RS01280 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit D1605_RS01290 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit D1605_RS01290 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region D1605_RS01290 PF10531 SLBB domain D1605_RS01295 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region D1605_RS01295 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal D1605_RS01295 PF00384 Molybdopterin oxidoreductase D1605_RS01300 PF00146 NADH dehydrogenase D1605_RS01305 PF12838 4Fe-4S dicluster domain D1605_RS01310 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 D1605_RS01315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L D1605_RS01320 PF00361 Proton-conducting membrane transporter D1605_RS01320 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus D1605_RS01325 PF00361 Proton-conducting membrane transporter D1605_RS01325 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus D1605_RS01330 PF00361 Proton-conducting membrane transporter D1605_RS01335 PF00106 short chain dehydrogenase D1605_RS01340 PF03600 Citrate transporter D1605_RS01350 PF00486 Transcriptional regulatory protein, C terminal D1605_RS01350 PF00072 Response regulator receiver domain D1605_RS01355 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS01355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS01355 PF08521 Two-component sensor kinase N-terminal D1605_RS01365 PF00072 Response regulator receiver domain D1605_RS01365 PF00196 Bacterial regulatory proteins, luxR family D1605_RS01370 PF09456 RcsC Alpha-Beta-Loop (ABL) D1605_RS01370 PF00072 Response regulator receiver domain D1605_RS01370 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS01370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS01385 PF00375 Sodium:dicarboxylate symporter family D1605_RS01390 PF00390 Malic enzyme, N-terminal domain D1605_RS01390 PF03949 Malic enzyme, NAD binding domain D1605_RS01390 PF01515 Phosphate acetyl/butaryl transferase D1605_RS01395 PF00183 Hsp90 protein D1605_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS01405 PF01467 Cytidylyltransferase-like D1605_RS01420 PF00037 4Fe-4S binding domain D1605_RS01430 PF00990 Diguanylate cyclase, GGDEF domain D1605_RS01435 PF08460 Bacterial SH3 domain D1605_RS01435 PF01551 Peptidase family M23 D1605_RS01440 PF01979 Amidohydrolase family D1605_RS01445 PF01809 Putative membrane protein insertion efficiency factor D1605_RS01450 PF01258 Prokaryotic dksA/traR C4-type zinc finger D1605_RS01460 PF05977 Transmembrane secretion effector D1605_RS01465 PF02657 Fe-S metabolism associated domain D1605_RS01470 PF01406 tRNA synthetases class I (C) catalytic domain D1605_RS01470 PF09190 DALR domain D1605_RS01480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1605_RS01480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1605_RS01485 PF00764 Arginosuccinate synthase D1605_RS01490 PF07687 Peptidase dimerisation domain D1605_RS01490 PF01546 Peptidase family M20/M25/M40 D1605_RS01495 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase D1605_RS01495 PF00696 Amino acid kinase family D1605_RS01500 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1605_RS01505 PF00206 Lyase D1605_RS01510 PF01472 PUA domain D1605_RS01510 PF00696 Amino acid kinase family D1605_RS01515 PF00171 Aldehyde dehydrogenase family D1605_RS01560 PF14437 MafB19-like deaminase D1605_RS01565 PF02742 Iron dependent repressor, metal binding and dimerisation domain D1605_RS01565 PF01325 Iron dependent repressor, N-terminal DNA binding domain D1605_RS01570 PF01566 Natural resistance-associated macrophage protein D1605_RS01575 PF04377 Arginine-tRNA-protein transferase, C terminus D1605_RS01575 PF04376 Arginine-tRNA-protein transferase, N terminus D1605_RS01595 PF12951 Passenger-associated-transport-repeat D1605_RS01595 PF03797 Autotransporter beta-domain D1605_RS01595 PF00082 Subtilase family D1605_RS01610 PF01553 Acyltransferase D1605_RS01620 PF05221 S-adenosyl-L-homocysteine hydrolase D1605_RS01620 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain D1605_RS01630 PF01351 Ribonuclease HII D1605_RS01635 PF02684 Lipid-A-disaccharide synthetase D1605_RS01640 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 D1605_RS01640 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_RS01645 PF07977 FabA-like domain D1605_RS01650 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD D1605_RS01650 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_RS01655 PF07244 Surface antigen variable number repeat D1605_RS01655 PF01103 Surface antigen D1605_RS01660 PF02163 Peptidase family M50 D1605_RS01660 PF17820 PDZ domain D1605_RS01665 PF13288 DXP reductoisomerase C-terminal domain D1605_RS01665 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase D1605_RS01665 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain D1605_RS01675 PF01255 Putative undecaprenyl diphosphate synthase D1605_RS01680 PF01765 Ribosome recycling factor D1605_RS01685 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) D1605_RS01705 PF00696 Amino acid kinase family D1605_RS01735 PF01081 KDPG and KHG aldolase D1605_RS01740 PF00920 Dehydratase family D1605_RS01745 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase D1605_RS01750 PF02685 Glucokinase D1605_RS01755 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain D1605_RS01755 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain D1605_RS01760 PF17912 MalK OB fold domain D1605_RS01760 PF00005 ABC transporter D1605_RS01765 PF01571 Aminomethyltransferase folate-binding domain D1605_RS01775 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D1605_RS01780 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit D1605_RS01785 PF02910 Fumarate reductase flavoprotein C-term D1605_RS01785 PF00890 FAD binding domain D1605_RS01790 PF13085 2Fe-2S iron-sulfur cluster binding domain D1605_RS01795 PF03937 Flavinator of succinate dehydrogenase D1605_RS01805 PF02687 FtsX-like permease family D1605_RS01805 PF12704 MacB-like periplasmic core domain D1605_RS01810 PF00005 ABC transporter D1605_RS01815 PF00753 Metallo-beta-lactamase superfamily D1605_RS01815 PF03772 Competence protein D1605_RS01820 PF01618 MotA/TolQ/ExbB proton channel family D1605_RS01830 PF00005 ABC transporter D1605_RS01830 PF00664 ABC transporter transmembrane region D1605_RS01835 PF02606 Tetraacyldisaccharide-1-P 4'-kinase D1605_RS01870 PF01381 Helix-turn-helix D1605_RS01875 PF15723 Motility quorum-sensing regulator, toxin of MqsA D1605_RS01880 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA D1605_RS01945 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS01945 PF00589 Phage integrase family D1605_RS01960 PF04264 YceI-like domain D1605_RS01965 PF13091 PLD-like domain D1605_RS01980 PF03358 NADPH-dependent FMN reductase D1605_RS01985 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain D1605_RS01985 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family D1605_RS02000 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain D1605_RS02000 PF00476 DNA polymerase family A D1605_RS02000 PF01612 3'-5' exonuclease D1605_RS02000 PF01367 5'-3' exonuclease, C-terminal SAM fold D1605_RS02005 PF05173 Dihydrodipicolinate reductase, C-terminus D1605_RS02005 PF01113 Dihydrodipicolinate reductase, N-terminus D1605_RS02010 PF00117 Glutamine amidotransferase class-I D1605_RS02010 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain D1605_RS02015 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain D1605_RS02015 PF02142 MGS-like domain D1605_RS02015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain D1605_RS02020 PF03449 Transcription elongation factor, N-terminal D1605_RS02020 PF01272 Transcription elongation factor, GreA/GreB, C-term D1605_RS02030 PF01368 DHH family D1605_RS02030 PF02272 DHHA1 domain D1605_RS02030 PF17768 RecJ OB domain D1605_RS02040 PF00152 tRNA synthetases class II (D, K and N) D1605_RS02040 PF01336 OB-fold nucleic acid binding domain D1605_RS02045 PF00072 Response regulator receiver domain D1605_RS02050 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS02050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS02050 PF00072 Response regulator receiver domain D1605_RS02050 PF01627 Hpt domain D1605_RS02055 PF00378 Enoyl-CoA hydratase/isomerase D1605_RS02060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain D1605_RS02060 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain D1605_RS02070 PF08245 Mur ligase middle domain D1605_RS02080 PF00293 NUDIX domain D1605_RS02085 PF02219 Methylenetetrahydrofolate reductase D1605_RS02095 PF02545 Maf-like protein D1605_RS02100 PF00575 S1 RNA binding domain D1605_RS02100 PF10150 Ribonuclease E/G family D1605_RS02110 PF01523 Putative modulator of DNA gyrase D1605_RS02115 PF04751 Protein of unknown function (DUF615) D1605_RS02120 PF01523 Putative modulator of DNA gyrase D1605_RS02125 PF03466 LysR substrate binding domain D1605_RS02125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1605_RS02140 PF08240 Alcohol dehydrogenase GroES-like domain D1605_RS02140 PF00107 Zinc-binding dehydrogenase D1605_RS02150 PF12804 MobA-like NTP transferase domain D1605_RS02150 PF14602 Hexapeptide repeat of succinyl-transferase D1605_RS02150 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_RS02160 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain D1605_RS02160 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain D1605_RS02165 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1605_RS02165 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1605_RS02170 PF00231 ATP synthase D1605_RS02175 PF02874 ATP synthase alpha/beta family, beta-barrel domain D1605_RS02175 PF00306 ATP synthase alpha/beta chain, C terminal domain D1605_RS02175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1605_RS02180 PF00213 ATP synthase delta (OSCP) subunit D1605_RS02185 PF00430 ATP synthase B/B' CF(0) D1605_RS02190 PF00137 ATP synthase subunit C D1605_RS02195 PF00119 ATP synthase A chain D1605_RS02210 PF00338 Ribosomal protein S10p/S20e D1605_RS02215 PF00297 Ribosomal protein L3 D1605_RS02220 PF00573 Ribosomal protein L4/L1 family D1605_RS02225 PF00276 Ribosomal protein L23 D1605_RS02230 PF00181 Ribosomal Proteins L2, RNA binding domain D1605_RS02230 PF03947 Ribosomal Proteins L2, C-terminal domain D1605_RS02235 PF00203 Ribosomal protein S19 D1605_RS02240 PF00237 Ribosomal protein L22p/L17e D1605_RS02245 PF00189 Ribosomal protein S3, C-terminal domain D1605_RS02245 PF07650 KH domain D1605_RS02250 PF00252 Ribosomal protein L16p/L10e D1605_RS02255 PF00831 Ribosomal L29 protein D1605_RS02260 PF00366 Ribosomal protein S17 D1605_RS02265 PF00238 Ribosomal protein L14p/L23e D1605_RS02270 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 D1605_RS02270 PF00467 KOW motif D1605_RS02275 PF00281 Ribosomal protein L5 D1605_RS02275 PF00673 ribosomal L5P family C-terminus D1605_RS02280 PF00253 Ribosomal protein S14p/S29e D1605_RS02285 PF00410 Ribosomal protein S8 D1605_RS02290 PF00347 Ribosomal protein L6 D1605_RS02295 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast D1605_RS02300 PF00333 Ribosomal protein S5, N-terminal domain D1605_RS02300 PF03719 Ribosomal protein S5, C-terminal domain D1605_RS02305 PF00327 Ribosomal protein L30p/L7e D1605_RS02310 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A D1605_RS02315 PF00344 SecY translocase D1605_RS02320 PF00416 Ribosomal protein S13/S18 D1605_RS02325 PF00411 Ribosomal protein S11 D1605_RS02330 PF00163 Ribosomal protein S4/S9 N-terminal domain D1605_RS02330 PF01479 S4 domain D1605_RS02335 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain D1605_RS02335 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain D1605_RS02335 PF01000 RNA polymerase Rpb3/RpoA insert domain D1605_RS02340 PF01196 Ribosomal protein L17 D1605_RS02345 PF04380 Membrane fusogenic activity D1605_RS02350 PF13335 Magnesium chelatase, subunit ChlI C-terminal D1605_RS02350 PF01078 Magnesium chelatase, subunit ChlI D1605_RS02360 PF00561 alpha/beta hydrolase fold D1605_RS02365 PF03280 Proteobacterial lipase chaperone protein D1605_RS02375 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1605_RS02375 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1605_RS02375 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1605_RS02390 PF05698 Bacterial trigger factor protein (TF) C-terminus D1605_RS02390 PF05697 Bacterial trigger factor protein (TF) D1605_RS02395 PF00574 Clp protease D1605_RS02400 PF07724 AAA domain (Cdc48 subfamily) D1605_RS02400 PF06689 ClpX C4-type zinc finger D1605_RS02400 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_RS02405 PF02190 ATP-dependent protease La (LON) substrate-binding domain D1605_RS02405 PF05362 Lon protease (S16) C-terminal proteolytic domain D1605_RS02405 PF00004 ATPase family associated with various cellular activities (AAA) D1605_RS02410 PF00216 Bacterial DNA-binding protein D1605_RS02435 PF03477 ATP cone domain D1605_RS02435 PF02867 Ribonucleotide reductase, barrel domain D1605_RS02435 PF00317 Ribonucleotide reductase, all-alpha domain D1605_RS02440 PF00268 Ribonucleotide reductase, small chain D1605_RS02455 PF00849 RNA pseudouridylate synthase D1605_RS02455 PF01479 S4 domain D1605_RS02460 PF13419 Haloacid dehalogenase-like hydrolase D1605_RS02470 PF00830 Ribosomal L28 family D1605_RS02475 PF00471 Ribosomal protein L33 D1605_RS02480 PF13091 PLD-like domain D1605_RS02480 PF13396 Phospholipase_D-nuclease N-terminal D1605_RS02485 PF02798 Glutathione S-transferase, N-terminal domain D1605_RS02485 PF00043 Glutathione S-transferase, C-terminal domain D1605_RS02490 PF00056 lactate/malate dehydrogenase, NAD binding domain D1605_RS02490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain D1605_RS02495 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD D1605_RS02500 PF03144 Elongation factor Tu domain 2 D1605_RS02500 PF00679 Elongation factor G C-terminus D1605_RS02500 PF00009 Elongation factor Tu GTP binding domain D1605_RS02510 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_RS02510 PF00529 HlyD membrane-fusion protein of T1SS D1605_RS02535 PF03412 Peptidase C39 family D1605_RS02535 PF00005 ABC transporter D1605_RS02535 PF00664 ABC transporter transmembrane region D1605_RS02540 PF01061 ABC-2 type transporter D1605_RS02545 PF00005 ABC transporter D1605_RS02550 PF05567 Neisseria PilC beta-propeller domain D1605_RS02565 PF04408 Helicase associated domain (HA2) D1605_RS02565 PF00270 DEAD/DEAH box helicase D1605_RS02565 PF00271 Helicase conserved C-terminal domain D1605_RS02565 PF08482 ATP-dependent helicase C-terminal D1605_RS02575 PF13185 GAF domain D1605_RS02580 PF01103 Surface antigen D1605_RS02580 PF17243 POTRA domain TamA domain 1 D1605_RS02585 PF04357 TamB, inner membrane protein subunit of TAM complex D1605_RS02595 PF00589 Phage integrase family D1605_RS02715 PF04303 PrpF protein D1605_RS02740 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain D1605_RS02740 PF17962 Bacterial macroglobulin domain 6 D1605_RS02740 PF11974 Bacterial alpha-2-macroglobulin MG3 domain D1605_RS02740 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain D1605_RS02740 PF01835 MG2 domain D1605_RS02740 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain D1605_RS02740 PF07703 Alpha-2-macroglobulin bait region domain D1605_RS02740 PF00207 Alpha-2-macroglobulin family D1605_RS02745 PF07859 alpha/beta hydrolase fold D1605_RS02750 PF12833 Helix-turn-helix domain D1605_RS02750 PF12852 Cupin D1605_RS02760 PF00929 Exonuclease D1605_RS02765 PF00924 Mechanosensitive ion channel D1605_RS02765 PF05552 Conserved TM helix D1605_RS02770 PF00391 PEP-utilising enzyme, mobile domain D1605_RS02770 PF02896 PEP-utilising enzyme, TIM barrel domain D1605_RS02770 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain D1605_RS02775 PF03618 Kinase/pyrophosphorylase D1605_RS02795 PF01341 Glycosyl hydrolases family 6 D1605_RS02795 PF00553 Cellulose binding domain D1605_RS02795 PF00041 Fibronectin type III domain D1605_RS02800 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family D1605_RS02800 PF04055 Radical SAM superfamily D1605_RS02805 PF03099 Biotin/lipoate A/B protein ligase family D1605_RS02810 PF04359 Protein of unknown function (DUF493) D1605_RS02830 PF04286 Protein of unknown function (DUF445) D1605_RS02835 PF03471 Transporter associated domain D1605_RS02835 PF01595 Cyclin M transmembrane N-terminal domain D1605_RS02835 PF00571 CBS domain D1605_RS02850 PF00204 DNA gyrase B D1605_RS02850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS02850 PF01751 Toprim domain D1605_RS02850 PF00986 DNA gyrase B subunit, carboxyl terminus D1605_RS02860 PF00117 Glutamine amidotransferase class-I D1605_RS02860 PF06418 CTP synthase N-terminus D1605_RS02865 PF00793 DAHP synthetase I family D1605_RS02870 PF00113 Enolase, C-terminal TIM barrel domain D1605_RS02870 PF03952 Enolase, N-terminal domain D1605_RS02875 PF04977 Septum formation initiator D1605_RS02880 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase D1605_RS02885 PF02542 YgbB family D1605_RS02890 PF01713 Smr domain D1605_RS02915 PF02470 MlaD protein D1605_RS02915 PF03886 ABC-type transport auxiliary lipoprotein component D1605_RS02920 PF00005 ABC transporter D1605_RS02925 PF02405 Permease MlaE D1605_RS02965 PF04085 rod shape-determining protein MreC D1605_RS02970 PF04093 rod shape-determining protein MreD D1605_RS02975 PF03717 Penicillin-binding Protein dimerisation domain D1605_RS02975 PF00905 Penicillin binding protein transpeptidase domain D1605_RS02980 PF01098 Cell cycle protein D1605_RS02985 PF02547 Queuosine biosynthesis protein D1605_RS02990 PF13291 ACT domain D1605_RS02990 PF04607 Region found in RelA / SpoT proteins D1605_RS02990 PF02824 TGS domain D1605_RS03005 PF03776 Septum formation topological specificity factor MinE D1605_RS03010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D1605_RS03015 PF03775 Septum formation inhibitor MinC, C-terminal domain D1605_RS03015 PF05209 Septum formation inhibitor MinC, N-terminal domain D1605_RS03030 PF00730 HhH-GPD superfamily base excision DNA repair protein D1605_RS03045 PF04264 YceI-like domain D1605_RS03050 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS03050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS03050 PF00072 Response regulator receiver domain D1605_RS03050 PF00672 HAMP domain D1605_RS03050 PF17149 Periplasmic sensor domain found in signal transduction proteins D1605_RS03050 PF01627 Hpt domain D1605_RS03055 PF00145 C-5 cytosine-specific DNA methylase D1605_RS03070 PF01208 Uroporphyrinogen decarboxylase (URO-D) D1605_RS03075 PF01761 3-dehydroquinate synthase D1605_RS03080 PF01202 Shikimate kinase D1605_RS03085 PF01243 Pyridoxamine 5'-phosphate oxidase D1605_RS03085 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region D1605_RS03090 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain D1605_RS03090 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1605_RS03100 PF03932 CutC family D1605_RS03115 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS03120 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS03125 PF00005 ABC transporter D1605_RS03125 PF12857 TOBE-like domain D1605_RS03135 PF00140 Sigma-70 factor, region 1.2 D1605_RS03135 PF04539 Sigma-70 region 3 D1605_RS03135 PF04542 Sigma-70 region 2 D1605_RS03135 PF04546 Sigma-70, non-essential region D1605_RS03135 PF04545 Sigma-70, region 4 D1605_RS03135 PF03979 Sigma-70 factor, region 1.1 D1605_RS03140 PF03989 DNA gyrase C-terminal domain, beta-propeller D1605_RS03140 PF00521 DNA gyrase/topoisomerase IV, subunit A D1605_RS03145 PF01047 MarR family D1605_RS03155 PF12697 Alpha/beta hydrolase family D1605_RS03160 PF00155 Aminotransferase class I and II D1605_RS03170 PF01040 UbiA prenyltransferase family D1605_RS03180 PF01743 Poly A polymerase head domain D1605_RS03180 PF01966 HD domain D1605_RS03180 PF12627 Probable RNA and SrmB- binding site of polymerase A D1605_RS03185 PF01464 Transglycosylase SLT domain D1605_RS03185 PF14718 Soluble lytic murein transglycosylase L domain D1605_RS03190 PF02666 Phosphatidylserine decarboxylase D1605_RS03195 PF02630 SCO1/SenC D1605_RS03205 PF05175 Methyltransferase small domain D1605_RS03210 PF01264 Chorismate synthase D1605_RS03220 PF01118 Semialdehyde dehydrogenase, NAD binding domain D1605_RS03220 PF02774 Semialdehyde dehydrogenase, dimerisation domain D1605_RS03230 PF01416 tRNA pseudouridine synthase D1605_RS03235 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase D1605_RS03240 PF00291 Pyridoxal-phosphate dependent enzyme D1605_RS03245 PF00290 Tryptophan synthase alpha chain D1605_RS03250 PF18073 Rubredoxin metal binding domain D1605_RS03255 PF00296 Luciferase-like monooxygenase D1605_RS03265 PF00270 DEAD/DEAH box helicase D1605_RS03265 PF00271 Helicase conserved C-terminal domain D1605_RS03265 PF16124 RecQ zinc-binding D1605_RS03265 PF09382 RQC domain D1605_RS03265 PF00570 HRDC domain D1605_RS03270 PF00210 Ferritin-like domain D1605_RS03275 PF11898 Domain of unknown function (DUF3418) D1605_RS03275 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold D1605_RS03275 PF00271 Helicase conserved C-terminal domain D1605_RS03275 PF04408 Helicase associated domain (HA2) D1605_RS03275 PF00270 DEAD/DEAH box helicase D1605_RS03280 PF02347 Glycine cleavage system P-protein D1605_RS03285 PF03626 Prokaryotic Cytochrome C oxidase subunit IV D1605_RS03290 PF00510 Cytochrome c oxidase subunit III D1605_RS03295 PF00115 Cytochrome C and Quinol oxidase polypeptide I D1605_RS03300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain D1605_RS03300 PF06481 COX Aromatic Rich Motif D1605_RS03305 PF00348 Polyprenyl synthetase D1605_RS03310 PF00436 Single-strand binding protein family D1605_RS03330 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1605_RS03340 PF02896 PEP-utilising enzyme, TIM barrel domain D1605_RS03340 PF00391 PEP-utilising enzyme, mobile domain D1605_RS03340 PF05524 PEP-utilising enzyme, N-terminal D1605_RS03345 PF00381 PTS HPr component phosphorylation site D1605_RS03355 PF03668 P-loop ATPase protein family D1605_RS03360 PF07475 HPr Serine kinase C-terminal domain D1605_RS03360 PF02603 HPr Serine kinase N terminus D1605_RS03365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein D1605_RS03370 PF04552 Sigma-54, DNA binding domain D1605_RS03370 PF04963 Sigma-54 factor, core binding domain D1605_RS03370 PF00309 Sigma-54 factor, Activator interacting domain (AID) D1605_RS03375 PF12399 Branched-chain amino acid ATP-binding cassette transporter D1605_RS03375 PF00005 ABC transporter D1605_RS03395 PF01380 SIS domain D1605_RS03395 PF00571 CBS domain D1605_RS03400 PF01722 BolA-like protein D1605_RS03405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1605_RS03435 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal D1605_RS03435 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain D1605_RS03435 PF02769 AIR synthase related protein, C-terminal domain D1605_RS03440 PF13098 Thioredoxin-like domain D1605_RS03440 PF10411 Disulfide bond isomerase protein N-terminus D1605_RS03445 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS03445 PF00589 Phage integrase family D1605_RS03450 PF00520 Ion transport protein D1605_RS03450 PF00027 Cyclic nucleotide-binding domain D1605_RS03455 PF00202 Aminotransferase class-III D1605_RS03460 PF04107 Glutamate-cysteine ligase family 2(GCS2) D1605_RS03465 PF01926 50S ribosome-binding GTPase D1605_RS03480 PF01323 DSBA-like thioredoxin domain D1605_RS03485 PF01323 DSBA-like thioredoxin domain D1605_RS03495 PF04356 Protein of unknown function (DUF489) D1605_RS03505 PF00293 NUDIX domain D1605_RS03510 PF02617 ATP-dependent Clp protease adaptor protein ClpS D1605_RS03515 PF02861 Clp amino terminal domain, pathogenicity island component D1605_RS03515 PF07724 AAA domain (Cdc48 subfamily) D1605_RS03515 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_RS03515 PF00004 ATPase family associated with various cellular activities (AAA) D1605_RS03515 PF17871 AAA lid domain D1605_RS03520 PF01176 Translation initiation factor 1A / IF-1 D1605_RS03525 PF03588 Leucyl/phenylalanyl-tRNA protein transferase D1605_RS03535 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_RS03540 PF13491 4TM region of DNA translocase FtsK/SpoIIIE D1605_RS03540 PF17854 FtsK alpha domain D1605_RS03540 PF09397 Ftsk gamma domain D1605_RS03540 PF01580 FtsK/SpoIIIE family D1605_RS03550 PF03548 Outer membrane lipoprotein carrier protein LolA D1605_RS03555 PF00004 ATPase family associated with various cellular activities (AAA) D1605_RS03555 PF12002 MgsA AAA+ ATPase C terminal D1605_RS03555 PF16193 AAA C-terminal domain D1605_RS03560 PF02537 CrcB-like protein, Camphor Resistance (CrcB) D1605_RS03565 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS03570 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) D1605_RS03590 PF02685 Glucokinase D1605_RS03600 PF07690 Major Facilitator Superfamily D1605_RS03605 PF00356 Bacterial regulatory proteins, lacI family D1605_RS03610 PF01380 SIS domain D1605_RS03615 PF01979 Amidohydrolase family D1605_RS03620 PF01039 Carboxyl transferase domain D1605_RS03620 PF17848 Acetyl-coA carboxylase zinc finger domain D1605_RS03625 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain D1605_RS03625 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II D1605_RS03625 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III D1605_RS03625 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I D1605_RS03630 PF01522 Polysaccharide deacetylase D1605_RS03635 PF00534 Glycosyl transferases group 1 D1605_RS03635 PF13439 Glycosyltransferase Family 4 D1605_RS03645 PF00355 Rieske [2Fe-2S] domain D1605_RS03650 PF00266 Aminotransferase class-V D1605_RS03655 PF01458 Uncharacterized protein family (UPF0051) D1605_RS03660 PF00005 ABC transporter D1605_RS03665 PF01458 Uncharacterized protein family (UPF0051) D1605_RS03670 PF02082 Transcriptional regulator D1605_RS03680 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain D1605_RS03680 PF00326 Prolyl oligopeptidase family D1605_RS03690 PF01678 Diaminopimelate epimerase D1605_RS03700 PF00589 Phage integrase family D1605_RS03700 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS03705 PF00227 Proteasome subunit D1605_RS03710 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_RS03710 PF00004 ATPase family associated with various cellular activities (AAA) D1605_RS03710 PF07724 AAA domain (Cdc48 subfamily) D1605_RS03720 PF01209 ubiE/COQ5 methyltransferase family D1605_RS03725 PF11838 ERAP1-like C-terminal domain D1605_RS03725 PF01433 Peptidase family M1 domain D1605_RS03745 PF13369 Transglutaminase-like superfamily D1605_RS03765 PF01507 Phosphoadenosine phosphosulfate reductase family D1605_RS03770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain D1605_RS03770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain D1605_RS03775 PF00258 Flavodoxin D1605_RS03775 PF00175 Oxidoreductase NAD-binding domain D1605_RS03775 PF00667 FAD binding domain D1605_RS03780 PF01507 Phosphoadenosine phosphosulfate reductase family D1605_RS03785 PF00009 Elongation factor Tu GTP binding domain D1605_RS03790 PF01192 RNA polymerase Rpb6 D1605_RS03795 PF00625 Guanylate kinase D1605_RS03800 PF08340 Domain of unknown function (DUF1732) D1605_RS03800 PF03755 YicC-like family, N-terminal region D1605_RS03805 PF01138 3' exoribonuclease family, domain 1 D1605_RS03805 PF03725 3' exoribonuclease family, domain 2 D1605_RS03810 PF01725 Ham1 family D1605_RS03815 PF04055 Radical SAM superfamily D1605_RS03815 PF06969 HemN C-terminal domain D1605_RS03830 PF00561 alpha/beta hydrolase fold D1605_RS03835 PF05175 Methyltransferase small domain D1605_RS03835 PF17827 PrmC N-terminal domain D1605_RS03850 PF05662 Coiled stalk of trimeric autotransporter adhesin D1605_RS03850 PF03895 YadA-like membrane anchor domain D1605_RS03850 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS03850 PF05658 Head domain of trimeric autotransporter adhesin D1605_RS03855 PF00437 Type II/IV secretion system protein D1605_RS03855 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1605_RS03860 PF00482 Type II secretion system (T2SS), protein F D1605_RS03870 PF08334 Type II secretion system (T2SS), protein G D1605_RS03875 PF12019 Type II transport protein GspH D1605_RS03880 PF07963 Prokaryotic N-terminal methylation motif D1605_RS03890 PF03934 Type II secretion system (T2SS), protein K D1605_RS03895 PF05137 Fimbrial assembly protein (PilN) D1605_RS03900 PF10741 Type II secretion system (T2SS), protein M subtype b D1605_RS03910 PF00263 Bacterial type II and III secretion system protein D1605_RS03910 PF03958 Bacterial type II/III secretion system short domain D1605_RS03915 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS03915 PF05658 Head domain of trimeric autotransporter adhesin D1605_RS03915 PF03895 YadA-like membrane anchor domain D1605_RS03915 PF05662 Coiled stalk of trimeric autotransporter adhesin D1605_RS03920 PF10417 C-terminal domain of 1-Cys peroxiredoxin D1605_RS03920 PF00578 AhpC/TSA family D1605_RS03925 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_RS03925 PF13192 Thioredoxin domain D1605_RS03930 PF03466 LysR substrate binding domain D1605_RS03930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1605_RS03935 PF00814 Glycoprotease family D1605_RS03940 PF01197 Ribosomal protein L31 D1605_RS03945 PF00285 Citrate synthase, C-terminal domain D1605_RS03950 PF00380 Ribosomal protein S9/S16 D1605_RS03955 PF00572 Ribosomal protein L13 D1605_RS03960 PF03232 Ubiquinone biosynthesis protein COQ7 D1605_RS03965 PF02675 S-adenosylmethionine decarboxylase D1605_RS03970 PF00027 Cyclic nucleotide-binding domain D1605_RS03970 PF00325 Bacterial regulatory proteins, crp family D1605_RS03990 PF00899 ThiF family D1605_RS04000 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_RS04000 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1605_RS04010 PF00364 Biotin-requiring enzyme D1605_RS04010 PF02817 e3 binding domain D1605_RS04010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1605_RS04015 PF16078 2-oxoglutarate dehydrogenase N-terminus D1605_RS04015 PF02779 Transketolase, pyrimidine binding domain D1605_RS04015 PF00676 Dehydrogenase E1 component D1605_RS04015 PF16870 2-oxoglutarate dehydrogenase C-terminal D1605_RS04020 PF08007 Cupin superfamily protein D1605_RS04025 PF00206 Lyase D1605_RS04025 PF08328 Adenylosuccinate lyase C-terminal D1605_RS04030 PF10415 Fumarase C C-terminus D1605_RS04030 PF00206 Lyase D1605_RS04035 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS04035 PF00589 Phage integrase family D1605_RS04090 PF13932 GidA associated domain D1605_RS04090 PF01134 Glucose inhibited division protein A D1605_RS04095 PF01134 Glucose inhibited division protein A D1605_RS04095 PF13932 GidA associated domain D1605_RS04115 PF13649 Methyltransferase domain D1605_RS04125 PF02649 Type I GTP cyclohydrolase folE2 D1605_RS04130 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_RS04135 PF00873 AcrB/AcrD/AcrF family D1605_RS04140 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_RS04140 PF00529 HlyD membrane-fusion protein of T1SS D1605_RS04145 PF05088 Bacterial NAD-glutamate dehydrogenase D1605_RS04150 PF01513 ATP-NAD kinase D1605_RS04170 PF08401 Domain of unknown function (DUF1738) D1605_RS04170 PF18818 Metallopeptidase superfamily domain D1605_RS04170 PF13362 Toprim domain D1605_RS04175 PF12706 Beta-lactamase superfamily domain D1605_RS04185 PF08411 Exonuclease C-terminal D1605_RS04185 PF00929 Exonuclease D1605_RS04195 PF00999 Sodium/hydrogen exchanger family D1605_RS04205 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) D1605_RS04215 PF01812 5-formyltetrahydrofolate cyclo-ligase family D1605_RS04225 PF05164 Cell division protein ZapA D1605_RS04235 PF03695 Uncharacterised protein family (UPF0149) D1605_RS04240 PF05195 Aminopeptidase P, N-terminal domain D1605_RS04240 PF00557 Metallopeptidase family M24 D1605_RS04245 PF00293 NUDIX domain D1605_RS04250 PF00881 Nitroreductase family D1605_RS04285 PF01063 Amino-transferase class IV D1605_RS04290 PF02954 Bacterial regulatory protein, Fis family D1605_RS04310 PF00535 Glycosyl transferase family 2 D1605_RS04320 PF00925 GTP cyclohydrolase II D1605_RS04325 PF00578 AhpC/TSA family D1605_RS04335 PF08461 Ribonuclease R winged-helix domain D1605_RS04335 PF17876 Cold shock domain D1605_RS04335 PF00773 RNB domain D1605_RS04335 PF08206 Ribonuclease B OB domain D1605_RS04335 PF00575 S1 RNA binding domain D1605_RS04340 PF08032 RNA 2'-O ribose methyltransferase substrate binding D1605_RS04340 PF00588 SpoU rRNA Methylase family D1605_RS04345 PF00132 Bacterial transferase hexapeptide (six repeats) D1605_RS04350 PF01227 GTP cyclohydrolase I D1605_RS04355 PF03895 YadA-like membrane anchor domain D1605_RS04355 PF05658 Head domain of trimeric autotransporter adhesin D1605_RS04355 PF05662 Coiled stalk of trimeric autotransporter adhesin D1605_RS04360 PF03186 CobD/Cbib protein D1605_RS04365 PF12805 FUSC-like inner membrane protein yccS D1605_RS04370 PF02844 Phosphoribosylglycinamide synthetase, N domain D1605_RS04370 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain D1605_RS04370 PF02843 Phosphoribosylglycinamide synthetase, C domain D1605_RS04375 PF01808 AICARFT/IMPCHase bienzyme D1605_RS04375 PF02142 MGS-like domain D1605_RS04385 PF00588 SpoU rRNA Methylase family D1605_RS04395 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1605_RS04395 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1605_RS04400 PF18273 Type III R-M EcoP15I C-terminal domain D1605_RS04400 PF01555 DNA methylase D1605_RS04410 PF00561 alpha/beta hydrolase fold D1605_RS04415 PF03692 Putative zinc- or iron-chelating domain D1605_RS04420 PF02540 NAD synthase D1605_RS04420 PF00795 Carbon-nitrogen hydrolase D1605_RS04425 PF02091 Glycyl-tRNA synthetase alpha subunit D1605_RS04430 PF02092 Glycyl-tRNA synthetase beta subunit D1605_RS04430 PF05746 DALR anticodon binding domain D1605_RS04445 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain D1605_RS04445 PF02951 Prokaryotic glutathione synthetase, N-terminal domain D1605_RS04450 PF00072 Response regulator receiver domain D1605_RS04455 PF01584 CheW-like domain D1605_RS04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain D1605_RS04460 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term D1605_RS04465 PF00072 Response regulator receiver domain D1605_RS04465 PF02895 Signal transducing histidine kinase, homodimeric domain D1605_RS04465 PF01584 CheW-like domain D1605_RS04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS04465 PF01627 Hpt domain D1605_RS04480 PF00156 Phosphoribosyl transferase domain D1605_RS04495 PF02875 Mur ligase family, glutamate ligase domain D1605_RS04495 PF08245 Mur ligase middle domain D1605_RS04505 PF01432 Peptidase family M3 D1605_RS04520 PF01625 Peptide methionine sulfoxide reductase D1605_RS04525 PF00375 Sodium:dicarboxylate symporter family D1605_RS04530 PF02780 Transketolase, C-terminal domain D1605_RS04530 PF00456 Transketolase, thiamine diphosphate binding domain D1605_RS04530 PF02779 Transketolase, pyrimidine binding domain D1605_RS04535 PF02527 rRNA small subunit methyltransferase G D1605_RS04540 PF01648 4'-phosphopantetheinyl transferase superfamily D1605_RS04565 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain D1605_RS04565 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain D1605_RS04570 PF00890 FAD binding domain D1605_RS04570 PF02910 Fumarate reductase flavoprotein C-term D1605_RS04575 PF02445 Quinolinate synthetase A protein D1605_RS04580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1605_RS04580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1605_RS04585 PF01371 Trp repressor protein D1605_RS04610 PF02885 Glycosyl transferase family, helical bundle domain D1605_RS04610 PF00117 Glutamine amidotransferase class-I D1605_RS04610 PF00591 Glycosyl transferase family, a/b domain D1605_RS04615 PF00425 chorismate binding enzyme D1605_RS04615 PF04715 Anthranilate synthase component I, N terminal region D1605_RS04620 PF00425 chorismate binding enzyme D1605_RS04620 PF04715 Anthranilate synthase component I, N terminal region D1605_RS04630 PF01026 TatD related DNase D1605_RS04650 PF02881 SRP54-type protein, helical bundle domain D1605_RS04650 PF00448 SRP54-type protein, GTPase domain D1605_RS04655 PF00730 HhH-GPD superfamily base excision DNA repair protein D1605_RS04655 PF14815 NUDIX domain D1605_RS04655 PF00633 Helix-hairpin-helix motif D1605_RS04660 PF04362 Bacterial Fe(2+) trafficking D1605_RS04670 PF01709 Transcriptional regulator D1605_RS04675 PF02075 Crossover junction endodeoxyribonuclease RuvC D1605_RS04680 PF01330 RuvA N terminal domain D1605_RS04680 PF07499 RuvA, C-terminal domain D1605_RS04685 PF02705 K+ potassium transporter D1605_RS04690 PF17864 RuvB AAA lid domain D1605_RS04690 PF05491 RuvB C-terminal winged helix domain D1605_RS04690 PF05496 Holliday junction DNA helicase RuvB P-loop domain D1605_RS04695 PF03061 Thioesterase superfamily D1605_RS04700 PF01618 MotA/TolQ/ExbB proton channel family D1605_RS04705 PF02472 Biopolymer transport protein ExbD/TolR D1605_RS04715 PF04052 TolB amino-terminal domain D1605_RS04715 PF07676 WD40-like Beta Propeller Repeat D1605_RS04720 PF00691 OmpA family D1605_RS04730 PF04055 Radical SAM superfamily D1605_RS04735 PF00300 Histidine phosphatase superfamily (branch 1) D1605_RS04740 PF04493 Endonuclease V D1605_RS04745 PF00854 POT family D1605_RS04750 PF00255 Glutathione peroxidase D1605_RS04755 PF00175 Oxidoreductase NAD-binding domain D1605_RS04755 PF00970 Oxidoreductase FAD-binding domain D1605_RS04760 PF13667 ThiC-associated domain D1605_RS04760 PF01964 Radical SAM ThiC family D1605_RS04765 PF10459 Peptidase S46 D1605_RS04770 PF00300 Histidine phosphatase superfamily (branch 1) D1605_RS04970 PF06508 Queuosine biosynthesis protein QueC D1605_RS04975 PF02938 GAD domain D1605_RS04975 PF00152 tRNA synthetases class II (D, K and N) D1605_RS04975 PF01336 OB-fold nucleic acid binding domain D1605_RS04980 PF05681 Fumarate hydratase (Fumerase) D1605_RS04980 PF05683 Fumarase C-terminus D1605_RS04995 PF03797 Autotransporter beta-domain D1605_RS04995 PF00082 Subtilase family D1605_RS04995 PF12951 Passenger-associated-transport-repeat D1605_RS05000 PF12323 Helix-turn-helix domain D1605_RS05000 PF01385 Probable transposase D1605_RS05000 PF07282 Putative transposase DNA-binding domain D1605_RS05050 PF05016 ParE toxin of type II toxin-antitoxin system, parDE D1605_RS05055 PF09386 Antitoxin ParD D1605_RS05105 PF10876 Phage tail assemb.y chaperone protein, TAC D1605_RS05160 PF04233 Phage Mu protein F like protein D1605_RS05195 PF05860 haemagglutination activity domain D1605_RS05195 PF13332 Hemagglutinin repeat D1605_RS05195 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS05195 PF04829 Pre-toxin domain with VENN motif D1605_RS05210 PF13356 Arm DNA-binding domain D1605_RS05210 PF00589 Phage integrase family D1605_RS05215 PF06381 Protein of unknown function (DUF1073) D1605_RS05245 PF00959 Phage lysozyme D1605_RS05280 PF02498 BRO family, N-terminal domain D1605_RS05280 PF10548 P22AR C-terminal domain D1605_RS05320 PF02661 Fic/DOC family D1605_RS05320 PF17841 BID domain of Bartonella effector protein (Bep) D1605_RS05325 PF18495 Antitoxin VbhA D1605_RS05365 PF10065 Uncharacterized conserved protein (DUF2303) D1605_RS05395 PF00436 Single-strand binding protein family D1605_RS05405 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS05405 PF00589 Phage integrase family D1605_RS05410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS05410 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS05410 PF00989 PAS fold D1605_RS05415 PF00158 Sigma-54 interaction domain D1605_RS05415 PF00072 Response regulator receiver domain D1605_RS05415 PF02954 Bacterial regulatory protein, Fis family D1605_RS05430 PF00909 Ammonium Transporter Family D1605_RS05435 PF00543 Nitrogen regulatory protein P-II D1605_RS05440 PF00120 Glutamine synthetase, catalytic domain D1605_RS05440 PF03951 Glutamine synthetase, beta-Grasp domain D1605_RS05445 PF02673 Bacitracin resistance protein BacA D1605_RS05450 PF04264 YceI-like domain D1605_RS05470 PF07055 Enoyl reductase FAD binding domain D1605_RS05470 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase D1605_RS05470 PF12241 Trans-2-enoyl-CoA reductase catalytic region D1605_RS05480 PF03109 ABC1 family D1605_RS05490 PF00551 Formyl transferase D1605_RS05495 PF07683 Cobalamin synthesis protein cobW C-terminal domain D1605_RS05495 PF02492 CobW/HypB/UreG, nucleotide-binding domain D1605_RS05505 PF03969 AFG1-like ATPase D1605_RS05510 PF02566 OsmC-like protein D1605_RS05515 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family D1605_RS05520 PF17804 Tail specific protease N-terminal domain D1605_RS05520 PF00595 PDZ domain D1605_RS05520 PF03572 Peptidase family S41 D1605_RS05520 PF11818 C-terminal domain of tail specific protease (DUF3340) D1605_RS05525 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain D1605_RS05525 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain D1605_RS05530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain D1605_RS05530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain D1605_RS05530 PF00205 Thiamine pyrophosphate enzyme, central domain D1605_RS05540 PF00291 Pyridoxal-phosphate dependent enzyme D1605_RS05545 PF00682 HMGL-like D1605_RS05545 PF08502 LeuA allosteric (dimerisation) domain D1605_RS05550 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal D1605_RS05550 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III D1605_RS05555 PF01783 Ribosomal L32p protein family D1605_RS05560 PF02620 Large ribosomal RNA subunit accumulation protein YceD D1605_RS05570 PF17863 AAA lid domain D1605_RS05570 PF07726 ATPase family associated with various cellular activities (AAA) D1605_RS05580 PF01841 Transglutaminase-like superfamily D1605_RS05580 PF13559 Domain of unknown function (DUF4129) D1605_RS05580 PF11992 Domain of unknown function (DUF3488) D1605_RS05590 PF01230 HIT domain D1605_RS05595 PF02132 RecR protein D1605_RS05595 PF13662 Toprim domain D1605_RS05600 PF02575 YbaB/EbfC DNA-binding family D1605_RS05605 PF12170 DNA polymerase III tau subunit V interacting with alpha D1605_RS05605 PF12169 DNA polymerase III subunits gamma and tau domain III D1605_RS05635 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus D1605_RS05635 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus D1605_RS05640 PF02556 Preprotein translocase subunit SecB D1605_RS05645 PF00581 Rhodanese-like domain D1605_RS05670 PF03099 Biotin/lipoate A/B protein ligase family D1605_RS05670 PF08279 HTH domain D1605_RS05670 PF02237 Biotin protein ligase C terminal domain D1605_RS05675 PF03309 Type III pantothenate kinase D1605_RS05705 PF00114 Pilin (bacterial filament) D1605_RS05705 PF07963 Prokaryotic N-terminal methylation motif D1605_RS05720 PF01168 Alanine racemase, N-terminal domain D1605_RS05725 PF01624 MutS domain I D1605_RS05725 PF00488 MutS domain V D1605_RS05725 PF05192 MutS domain III D1605_RS05725 PF05188 MutS domain II D1605_RS05725 PF05190 MutS family domain IV D1605_RS05730 PF00912 Transglycosylase D1605_RS05735 PF01430 Hsp33 protein D1605_RS05750 PF01042 Endoribonuclease L-PSP D1605_RS05790 PF17482 Phage tail sheath C-terminal domain D1605_RS05790 PF04984 Phage tail sheath protein subtilisin-like domain D1605_RS05815 PF04221 RelB antitoxin D1605_RS05820 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ D1605_RS05890 PF00959 Phage lysozyme D1605_RS05955 PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT D1605_RS06025 PF02498 BRO family, N-terminal domain D1605_RS06025 PF10548 P22AR C-terminal domain D1605_RS06060 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS06060 PF00589 Phage integrase family D1605_RS06065 PF09924 Uncharacterised conserved protein (DUF2156) D1605_RS06065 PF03706 Lysylphosphatidylglycerol synthase TM region D1605_RS06075 PF00109 Beta-ketoacyl synthase, N-terminal domain D1605_RS06075 PF02801 Beta-ketoacyl synthase, C-terminal domain D1605_RS06085 PF00535 Glycosyl transferase family 2 D1605_RS06100 PF00437 Type II/IV secretion system protein D1605_RS06105 PF00437 Type II/IV secretion system protein D1605_RS06120 PF03900 Porphobilinogen deaminase, C-terminal domain D1605_RS06120 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain D1605_RS06125 PF04397 LytTr DNA-binding domain D1605_RS06125 PF00072 Response regulator receiver domain D1605_RS06130 PF06580 Histidine kinase D1605_RS06130 PF07694 5TMR of 5TMR-LYT D1605_RS06135 PF02230 Phospholipase/Carboxylesterase D1605_RS06140 PF13632 Glycosyl transferase family group 2 D1605_RS06155 PF01209 ubiE/COQ5 methyltransferase family D1605_RS06180 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family D1605_RS06190 PF00294 pfkB family carbohydrate kinase D1605_RS06195 PF07690 Major Facilitator Superfamily D1605_RS06205 PF04102 SlyX D1605_RS06210 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain D1605_RS06210 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain D1605_RS06210 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain D1605_RS06215 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1605_RS06215 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1605_RS06220 PF00255 Glutathione peroxidase D1605_RS06225 PF00005 ABC transporter D1605_RS06255 PF05973 Phage derived protein Gp49-like (DUF891) D1605_RS06260 PF01381 Helix-turn-helix D1605_RS06310 PF10876 Phage tail assemb.y chaperone protein, TAC D1605_RS06365 PF02899 Phage integrase, N-terminal SAM-like domain D1605_RS06365 PF00589 Phage integrase family D1605_RS06370 PF00005 ABC transporter D1605_RS06370 PF12848 ABC transporter D1605_RS06375 PF00593 TonB dependent receptor D1605_RS06375 PF07715 TonB-dependent Receptor Plug Domain D1605_RS06380 PF01323 DSBA-like thioredoxin domain D1605_RS06385 PF07715 TonB-dependent Receptor Plug Domain D1605_RS06385 PF00593 TonB dependent receptor D1605_RS06390 PF02254 TrkA-N domain D1605_RS06390 PF00999 Sodium/hydrogen exchanger family D1605_RS06395 PF12849 PBP superfamily domain D1605_RS06400 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS06405 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS06410 PF00005 ABC transporter D1605_RS06415 PF01895 PhoU domain D1605_RS06420 PF00929 Exonuclease D1605_RS06425 PF00398 Ribosomal RNA adenine dimethylase D1605_RS06430 PF04379 ApaG domain D1605_RS06435 PF00149 Calcineurin-like phosphoesterase D1605_RS06450 PF01075 Glycosyltransferase family 9 (heptosyltransferase) D1605_RS06470 PF00929 Exonuclease D1605_RS06475 PF00075 RNase H D1605_RS06485 PF16123 Hydroxyacylglutathione hydrolase C-terminus D1605_RS06485 PF00753 Metallo-beta-lactamase superfamily D1605_RS06500 PF16921 Tex protein YqgF-like domain D1605_RS06500 PF09371 Tex-like protein N-terminal domain D1605_RS06500 PF00575 S1 RNA binding domain D1605_RS06500 PF17674 HHH domain D1605_RS06515 PF00719 Inorganic pyrophosphatase D1605_RS06520 PF00085 Thioredoxin D1605_RS06530 PF13603 Leucyl-tRNA synthetase, Domain 2 D1605_RS06530 PF00133 tRNA synthetases class I (I, L, M and V) D1605_RS06530 PF08264 Anticodon-binding domain of tRNA D1605_RS06545 PF01467 Cytidylyltransferase-like D1605_RS06565 PF13406 Transglycosylase SLT domain D1605_RS06570 PF05036 Sporulation related domain D1605_RS06570 PF03330 Lytic transglycolase D1605_RS06620 PF13332 Hemagglutinin repeat D1605_RS06620 PF05860 haemagglutination activity domain D1605_RS06620 PF04829 Pre-toxin domain with VENN motif D1605_RS06620 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS06650 PF01132 Elongation factor P (EF-P) OB domain D1605_RS06650 PF08207 Elongation factor P (EF-P) KOW-like domain D1605_RS06650 PF09285 Elongation factor P, C-terminal D1605_RS06655 PF01565 FAD binding domain D1605_RS06655 PF02913 FAD linked oxidases, C-terminal domain D1605_RS06660 PF01842 ACT domain D1605_RS06660 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain D1605_RS06660 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain D1605_RS06665 PF13520 Amino acid permease D1605_RS06675 PF00596 Class II Aldolase and Adducin N-terminal domain D1605_RS06680 PF03079 ARD/ARD' family D1605_RS06690 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase D1605_RS06690 PF01502 Phosphoribosyl-AMP cyclohydrolase D1605_RS06695 PF00977 Histidine biosynthesis protein D1605_RS06700 PF00977 Histidine biosynthesis protein D1605_RS06705 PF00117 Glutamine amidotransferase class-I D1605_RS06710 PF00475 Imidazoleglycerol-phosphate dehydratase D1605_RS06715 PF00155 Aminotransferase class I and II D1605_RS06720 PF00815 Histidinol dehydrogenase D1605_RS06725 PF01634 ATP phosphoribosyltransferase D1605_RS06725 PF08029 HisG, C-terminal domain D1605_RS06735 PF13393 Histidyl-tRNA synthetase D1605_RS06735 PF03129 Anticodon binding domain D1605_RS06740 PF14821 Threonine synthase N terminus D1605_RS06740 PF00291 Pyridoxal-phosphate dependent enzyme D1605_RS06745 PF00288 GHMP kinases N terminal domain D1605_RS06745 PF08544 GHMP kinases C terminal D1605_RS06750 PF00742 Homoserine dehydrogenase D1605_RS06750 PF13840 ACT domain D1605_RS06750 PF00696 Amino acid kinase family D1605_RS06750 PF03447 Homoserine dehydrogenase, NAD binding domain D1605_RS06750 PF01842 ACT domain D1605_RS06755 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain D1605_RS06755 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain D1605_RS06760 PF03652 Holliday junction resolvase D1605_RS06765 PF02622 Uncharacterized ACR, COG1678 D1605_RS06770 PF07943 Penicillin-binding protein 5, C-terminal domain D1605_RS06770 PF00768 D-alanyl-D-alanine carboxypeptidase D1605_RS06780 PF00141 Peroxidase D1605_RS06785 PF01556 DnaJ C terminal domain D1605_RS06785 PF00226 DnaJ domain D1605_RS06795 PF00905 Penicillin binding protein transpeptidase domain D1605_RS06795 PF00912 Transglycosylase D1605_RS06795 PF06832 Penicillin-Binding Protein C-terminus Family D1605_RS06805 PF00593 TonB dependent receptor D1605_RS06805 PF07715 TonB-dependent Receptor Plug Domain D1605_RS06810 PF04542 Sigma-70 region 2 D1605_RS06810 PF08281 Sigma-70, region 4 D1605_RS06820 PF13180 PDZ domain D1605_RS06825 PF06421 GTP-binding protein LepA C-terminus D1605_RS06825 PF03144 Elongation factor Tu domain 2 D1605_RS06825 PF00009 Elongation factor Tu GTP binding domain D1605_RS06825 PF00679 Elongation factor G C-terminus D1605_RS06830 PF10502 Signal peptidase, peptidase S26 D1605_RS06840 PF00035 Double-stranded RNA binding motif D1605_RS06840 PF14622 Ribonuclease-III-like D1605_RS06845 PF01926 50S ribosome-binding GTPase D1605_RS06845 PF07650 KH domain D1605_RS06850 PF11967 Recombination protein O N terminal D1605_RS06850 PF02565 Recombination protein O C terminal D1605_RS06855 PF13292 1-deoxy-D-xylulose-5-phosphate synthase D1605_RS06855 PF02779 Transketolase, pyrimidine binding domain D1605_RS06855 PF02780 Transketolase, C-terminal domain D1605_RS06860 PF00474 Sodium:solute symporter family D1605_RS06870 PF13193 AMP-binding enzyme C-terminal domain D1605_RS06870 PF00501 AMP-binding enzyme D1605_RS06870 PF16177 Acetyl-coenzyme A synthetase N-terminus D1605_RS06875 PF02659 Putative manganese efflux pump D1605_RS06885 PF13360 PQQ-like domain D1605_RS06890 PF07676 WD40-like Beta Propeller Repeat D1605_RS06890 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region D1605_RS06890 PF00326 Prolyl oligopeptidase family D1605_RS06895 PF03169 OPT oligopeptide transporter protein D1605_RS06905 PF01266 FAD dependent oxidoreductase D1605_RS06905 PF16901 C-terminal domain of alpha-glycerophosphate oxidase D1605_RS06910 PF00230 Major intrinsic protein D1605_RS06915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain D1605_RS06915 PF02782 FGGY family of carbohydrate kinases, C-terminal domain D1605_RS06925 PF01263 Aldose 1-epimerase D1605_RS06930 PF08267 Cobalamin-independent synthase, N-terminal domain D1605_RS06930 PF01717 Cobalamin-independent synthase, Catalytic domain D1605_RS06935 PF02677 Epoxyqueuosine reductase QueH D1605_RS06940 PF00857 Isochorismatase family D1605_RS06945 PF00501 AMP-binding enzyme D1605_RS06955 PF00535 Glycosyl transferase family 2 D1605_RS06960 PF01370 NAD dependent epimerase/dehydratase family D1605_RS06965 PF02195 ParB-like nuclease domain D1605_RS06965 PF17762 HTH domain found in ParB protein D1605_RS06970 PF13614 AAA domain D1605_RS06980 PF02403 Seryl-tRNA synthetase N-terminal domain D1605_RS06980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1605_RS06985 PF03544 Gram-negative bacterial TonB protein C-terminal D1605_RS07015 PF01555 DNA methylase D1605_RS07025 PF01541 GIY-YIG catalytic domain D1605_RS07025 PF02151 UvrB/uvrC motif D1605_RS07025 PF08459 UvrC Helix-hairpin-helix N-terminal D1605_RS07030 PF01066 CDP-alcohol phosphatidyltransferase D1605_RS07050 PF00490 Delta-aminolevulinic acid dehydratase D1605_RS07055 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily D1605_RS07070 PF00202 Aminotransferase class-III D1605_RS07075 PF10609 NUBPL iron-transfer P-loop NTPase D1605_RS07080 PF02348 Cytidylyltransferase D1605_RS07085 PF01451 Low molecular weight phosphotyrosine protein phosphatase D1605_RS07090 PF01555 DNA methylase D1605_RS07175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) D1605_RS07180 PF01817 Chorismate mutase type II D1605_RS07180 PF00800 Prephenate dehydratase D1605_RS07180 PF01842 ACT domain D1605_RS07185 PF00266 Aminotransferase class-V D1605_RS07195 PF12679 ABC-2 family transporter protein D1605_RS07200 PF00005 ABC transporter D1605_RS07210 PF00186 Dihydrofolate reductase D1605_RS07215 PF00303 Thymidylate synthase D1605_RS07220 PF01790 Prolipoprotein diacylglyceryl transferase D1605_RS07225 PF01219 Prokaryotic diacylglycerol kinase D1605_RS07230 PF00486 Transcriptional regulatory protein, C terminal D1605_RS07230 PF00072 Response regulator receiver domain D1605_RS07235 PF01817 Chorismate mutase type II D1605_RS07235 PF02153 Prephenate dehydrogenase D1605_RS07240 PF00684 DnaJ central domain D1605_RS07240 PF00226 DnaJ domain D1605_RS07240 PF01556 DnaJ C terminal domain D1605_RS07245 PF00012 Hsp70 protein D1605_RS07250 PF01025 GrpE D1605_RS07255 PF01628 HrcA protein C terminal domain D1605_RS07255 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding D1605_RS07260 PF13476 AAA domain D1605_RS07260 PF02463 RecF/RecN/SMC N terminal domain D1605_RS07265 PF01475 Ferric uptake regulator family D1605_RS07270 PF04355 SmpA / OmlA family D1605_RS07275 PF03658 RnfH family Ubiquitin D1605_RS07285 PF01668 SmpB protein D1605_RS07295 PF00313 'Cold-shock' DNA-binding domain D1605_RS07300 PF01048 Phosphorylase superfamily D1605_RS07305 PF00156 Phosphoribosyl transferase domain D1605_RS07310 PF00933 Glycosyl hydrolase family 3 N terminal domain D1605_RS07315 PF01928 CYTH domain D1605_RS07320 PF05958 tRNA (Uracil-5-)-methyltransferase D1605_RS07325 PF00486 Transcriptional regulatory protein, C terminal D1605_RS07325 PF00072 Response regulator receiver domain D1605_RS07330 PF03808 Glycosyl transferase WecB/TagA/CpsF family D1605_RS07340 PF14667 Polysaccharide biosynthesis C-terminal domain D1605_RS07345 PF13439 Glycosyltransferase Family 4 D1605_RS07345 PF00534 Glycosyl transferases group 1 D1605_RS07360 PF02397 Bacterial sugar transferase D1605_RS07375 PF00180 Isocitrate/isopropylmalate dehydrogenase D1605_RS07380 PF00694 Aconitase C-terminal domain D1605_RS07385 PF00330 Aconitase family (aconitate hydratase) D1605_RS07405 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term D1605_RS07405 PF14489 QueF-like protein D1605_RS07410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion D1605_RS07415 PF00873 AcrB/AcrD/AcrF family D1605_RS07420 PF00873 AcrB/AcrD/AcrF family D1605_RS07430 PF08240 Alcohol dehydrogenase GroES-like domain D1605_RS07430 PF00107 Zinc-binding dehydrogenase D1605_RS07445 PF00462 Glutaredoxin D1605_RS07450 PF01522 Polysaccharide deacetylase D1605_RS07455 PF00155 Aminotransferase class I and II D1605_RS07460 PF03412 Peptidase C39 family D1605_RS07460 PF00005 ABC transporter D1605_RS07460 PF00664 ABC transporter transmembrane region D1605_RS07525 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_RS07525 PF06594 Haemolysin-type calcium binding protein related domain D1605_RS07535 PF13091 PLD-like domain D1605_RS07535 PF13087 AAA domain D1605_RS07570 PF02401 LytB protein D1605_RS07575 PF01252 Signal peptidase (SPase) II D1605_RS07580 PF06827 Zinc finger found in FPG and IleRS D1605_RS07580 PF00133 tRNA synthetases class I (I, L, M and V) D1605_RS07580 PF08264 Anticodon-binding domain of tRNA D1605_RS07585 PF01687 Riboflavin kinase D1605_RS07585 PF06574 FAD synthetase D1605_RS07590 PF03023 Lipid II flippase MurJ D1605_RS07595 PF01649 Ribosomal protein S20 D1605_RS07600 PF01926 50S ribosome-binding GTPase D1605_RS07600 PF01018 GTP1/OBG D1605_RS07605 PF01016 Ribosomal L27 protein D1605_RS07610 PF00829 Ribosomal prokaryotic L21 protein D1605_RS07615 PF00005 ABC transporter D1605_RS07615 PF17760 UvrA interaction domain D1605_RS07615 PF17755 UvrA DNA-binding domain D1605_RS07630 PF00958 GMP synthase C terminal domain D1605_RS07630 PF00117 Glutamine amidotransferase class-I D1605_RS07630 PF02540 NAD synthase D1605_RS07635 PF00478 IMP dehydrogenase / GMP reductase domain D1605_RS07635 PF00571 CBS domain D1605_RS07640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain D1605_RS07640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain D1605_RS07645 PF00483 Nucleotidyl transferase D1605_RS07650 PF02719 Polysaccharide biosynthesis protein D1605_RS07655 PF00953 Glycosyl transferase family 4 D1605_RS07660 PF18073 Rubredoxin metal binding domain D1605_RS07670 PF00216 Bacterial DNA-binding protein D1605_RS07675 PF00575 S1 RNA binding domain D1605_RS07680 PF02224 Cytidylate kinase D1605_RS07685 PF00444 Ribosomal protein L36 D1605_RS07695 PF04371 Porphyromonas-type peptidyl-arginine deiminase D1605_RS07700 PF00795 Carbon-nitrogen hydrolase D1605_RS07715 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS07745 PF02616 Segregation and condensation protein ScpA D1605_RS07750 PF04079 Segregation and condensation complex subunit ScpB D1605_RS07755 PF00849 RNA pseudouridylate synthase D1605_RS07755 PF01479 S4 domain D1605_RS07765 PF00795 Carbon-nitrogen hydrolase D1605_RS07770 PF00155 Aminotransferase class I and II D1605_RS07775 PF00005 ABC transporter D1605_RS07780 PF03379 CcmB protein D1605_RS07785 PF01578 Cytochrome C assembly protein D1605_RS07795 PF03100 CcmE D1605_RS07800 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal D1605_RS07800 PF01578 Cytochrome C assembly protein D1605_RS07805 PF08534 Redoxin D1605_RS07810 PF03918 Cytochrome C biogenesis protein D1605_RS07825 PF00561 alpha/beta hydrolase fold D1605_RS07830 PF00295 Glycosyl hydrolases family 28 D1605_RS07845 PF13419 Haloacid dehalogenase-like hydrolase D1605_RS07855 PF01979 Amidohydrolase family D1605_RS07860 PF08207 Elongation factor P (EF-P) KOW-like domain D1605_RS07860 PF01132 Elongation factor P (EF-P) OB domain D1605_RS07860 PF09285 Elongation factor P, C-terminal D1605_RS07865 PF04055 Radical SAM superfamily D1605_RS07870 PF00588 SpoU rRNA Methylase family D1605_RS07875 PF00459 Inositol monophosphatase family D1605_RS07895 PF09115 DNA polymerase III, delta subunit, C terminal D1605_RS07900 PF02618 YceG-like family D1605_RS07905 PF00425 chorismate binding enzyme D1605_RS07905 PF04715 Anthranilate synthase component I, N terminal region D1605_RS07910 PF02801 Beta-ketoacyl synthase, C-terminal domain D1605_RS07910 PF00109 Beta-ketoacyl synthase, N-terminal domain D1605_RS07915 PF00550 Phosphopantetheine attachment site D1605_RS07925 PF00698 Acyl transferase domain D1605_RS07930 PF00456 Transketolase, thiamine diphosphate binding domain D1605_RS07930 PF17831 Pyruvate dehydrogenase E1 component middle domain D1605_RS07935 PF06594 Haemolysin-type calcium binding protein related domain D1605_RS07935 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_RS07970 PF00348 Polyprenyl synthetase D1605_RS07975 PF02609 Exonuclease VII small subunit D1605_RS07980 PF09179 TilS substrate binding domain D1605_RS07980 PF11734 TilS substrate C-terminal domain D1605_RS07980 PF01171 PP-loop family D1605_RS07990 PF00245 Alkaline phosphatase D1605_RS07995 PF00375 Sodium:dicarboxylate symporter family D1605_RS08005 PF00877 NlpC/P60 family D1605_RS08010 PF00877 NlpC/P60 family D1605_RS08015 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1605_RS08020 PF04235 Protein of unknown function (DUF418) D1605_RS08030 PF00633 Helix-hairpin-helix motif D1605_RS08030 PF10576 Iron-sulfur binding domain of endonuclease III D1605_RS08030 PF00730 HhH-GPD superfamily base excision DNA repair protein D1605_RS08040 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase D1605_RS08040 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase D1605_RS08080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain D1605_RS08080 PF01488 Shikimate / quinate 5-dehydrogenase D1605_RS08080 PF08501 Shikimate dehydrogenase substrate binding domain D1605_RS08090 PF02581 Thiamine monophosphate synthase D1605_RS08090 PF08543 Phosphomethylpyrimidine kinase D1605_RS08095 PF02683 Cytochrome C biogenesis protein transmembrane region D1605_RS08095 PF11412 Disulphide bond corrector protein DsbC D1605_RS08100 PF03091 CutA1 divalent ion tolerance protein D1605_RS08105 PF00166 Chaperonin 10 Kd subunit D1605_RS08110 PF00118 TCP-1/cpn60 chaperonin family D1605_RS08135 PF01370 NAD dependent epimerase/dehydratase family D1605_RS08140 PF01370 NAD dependent epimerase/dehydratase family D1605_RS08145 PF16363 GDP-mannose 4,6 dehydratase D1605_RS08160 PF00291 Pyridoxal-phosphate dependent enzyme D1605_RS08180 PF07715 TonB-dependent Receptor Plug Domain D1605_RS08180 PF00593 TonB dependent receptor D1605_RS08185 PF13640 2OG-Fe(II) oxygenase superfamily D1605_RS08185 PF18331 PKHD-type hydroxylase C-terminal domain D1605_RS08205 PF02424 ApbE family D1605_RS08215 PF01636 Phosphotransferase enzyme family D1605_RS08220 PF00483 Nucleotidyl transferase D1605_RS08225 PF00308 Bacterial dnaA protein D1605_RS08230 PF01594 AI-2E family transporter D1605_RS08240 PF00586 AIR synthase related protein, N-terminal domain D1605_RS08240 PF02769 AIR synthase related protein, C-terminal domain D1605_RS08245 PF00551 Formyl transferase D1605_RS08260 PF02223 Thymidylate kinase D1605_RS08270 PF01431 Peptidase family M13 D1605_RS08270 PF05649 Peptidase family M13 D1605_RS08280 PF07977 FabA-like domain D1605_RS08285 PF01171 PP-loop family D1605_RS08290 PF04381 Putative exonuclease, RdgC D1605_RS08300 PF00762 Ferrochelatase D1605_RS08310 PF02416 mttA/Hcf106 family D1605_RS08315 PF02416 mttA/Hcf106 family D1605_RS08320 PF00902 Sec-independent protein translocase protein (TatC) D1605_RS08330 PF00958 GMP synthase C terminal domain D1605_RS08330 PF00117 Glutamine amidotransferase class-I D1605_RS08340 PF00127 Copper binding proteins, plastocyanin/azurin family D1605_RS08345 PF03193 RsgA GTPase D1605_RS08350 PF02021 Uncharacterised protein family UPF0102 D1605_RS08355 PF04348 LppC putative lipoprotein D1605_RS08360 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1605_RS08365 PF07715 TonB-dependent Receptor Plug Domain D1605_RS08365 PF00593 TonB dependent receptor D1605_RS08370 PF01588 Putative tRNA binding domain D1605_RS08370 PF09334 tRNA synthetases class I (M) D1605_RS08380 PF04060 Putative Fe-S cluster D1605_RS08435 PF08275 DNA primase catalytic core, N-terminal domain D1605_RS08435 PF01807 CHC2 zinc finger D1605_RS08455 PF00436 Single-strand binding protein family D1605_RS08500 PF07963 Prokaryotic N-terminal methylation motif D1605_RS08500 PF00114 Pilin (bacterial filament) D1605_RS08505 PF05567 Neisseria PilC beta-propeller domain D1605_RS08525 PF14245 Type IV pilin PilA D1605_RS08525 PF07963 Prokaryotic N-terminal methylation motif D1605_RS08530 PF03641 Possible lysine decarboxylase D1605_RS08530 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases D1605_RS08530 PF11892 Domain of unknown function (DUF3412) D1605_RS08535 PF00563 EAL domain D1605_RS08535 PF12792 CSS motif domain associated with EAL D1605_RS08540 PF00899 ThiF family D1605_RS08545 PF01926 50S ribosome-binding GTPase D1605_RS08545 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal D1605_RS08550 PF13360 PQQ-like domain D1605_RS08550 PF01011 PQQ enzyme repeat D1605_RS08570 PF04055 Radical SAM superfamily D1605_RS08575 PF00334 Nucleoside diphosphate kinase D1605_RS08580 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain D1605_RS08580 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain D1605_RS08585 PF00709 Adenylosuccinate synthetase D1605_RS08595 PF01145 SPFH domain / Band 7 family D1605_RS08600 PF12221 Bacterial membrane protein N terminal D1605_RS08600 PF01145 SPFH domain / Band 7 family D1605_RS08605 PF08240 Alcohol dehydrogenase GroES-like domain D1605_RS08605 PF00107 Zinc-binding dehydrogenase D1605_RS08610 PF00072 Response regulator receiver domain D1605_RS08625 PF03129 Anticodon binding domain D1605_RS08625 PF04073 Aminoacyl-tRNA editing domain D1605_RS08625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1605_RS08635 PF01066 CDP-alcohol phosphatidyltransferase D1605_RS08650 PF14310 Fibronectin type III-like domain D1605_RS08650 PF00933 Glycosyl hydrolase family 3 N terminal domain D1605_RS08650 PF01915 Glycosyl hydrolase family 3 C-terminal domain D1605_RS08655 PF00924 Mechanosensitive ion channel D1605_RS08660 PF02152 Dihydroneopterin aldolase D1605_RS08665 PF00814 Glycoprotease family D1605_RS08670 PF01165 Ribosomal protein S21 D1605_RS08675 PF09424 Yqey-like protein D1605_RS08680 PF03631 Virulence factor BrkB D1605_RS08685 PF08278 DNA primase DnaG DnaB-binding D1605_RS08685 PF01807 CHC2 zinc finger D1605_RS08685 PF08275 DNA primase catalytic core, N-terminal domain D1605_RS08685 PF10410 DnaB-helicase binding domain of primase D1605_RS08700 PF01555 DNA methylase D1605_RS08710 PF00579 tRNA synthetases class I (W and Y) D1605_RS08715 PF13538 UvrD-like helicase C-terminal domain D1605_RS08725 PF00580 UvrD/REP helicase N-terminal domain D1605_RS08725 PF12705 PD-(D/E)XK nuclease superfamily D1605_RS08725 PF13361 UvrD-like helicase C-terminal domain D1605_RS08730 PF17946 RecC C-terminal domain D1605_RS08735 PF00005 ABC transporter D1605_RS08740 PF02405 Permease MlaE D1605_RS08750 PF05494 MlaC protein D1605_RS08760 PF04333 MlaA lipoprotein D1605_RS08765 PF02646 RmuC family D1605_RS08770 PF00005 ABC transporter D1605_RS08780 PF13520 Amino acid permease D1605_RS08785 PF17785 PUA-like domain D1605_RS08785 PF10672 S-adenosylmethionine-dependent methyltransferase D1605_RS08790 PF03741 Integral membrane protein TerC family D1605_RS08795 PF01521 Iron-sulphur cluster biosynthesis D1605_RS08810 PF00072 Response regulator receiver domain D1605_RS08810 PF00486 Transcriptional regulatory protein, C terminal D1605_RS08825 PF00210 Ferritin-like domain D1605_RS08835 PF00293 NUDIX domain D1605_RS08850 PF02772 S-adenosylmethionine synthetase, central domain D1605_RS08850 PF02773 S-adenosylmethionine synthetase, C-terminal domain D1605_RS08850 PF00438 S-adenosylmethionine synthetase, N-terminal domain D1605_RS08855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS08860 PF00486 Transcriptional regulatory protein, C terminal D1605_RS08860 PF00072 Response regulator receiver domain D1605_RS08870 PF01207 Dihydrouridine synthase (Dus) D1605_RS08880 PF00593 TonB dependent receptor D1605_RS08880 PF07715 TonB-dependent Receptor Plug Domain D1605_RS08895 PF00004 ATPase family associated with various cellular activities (AAA) D1605_RS08895 PF07724 AAA domain (Cdc48 subfamily) D1605_RS08895 PF17871 AAA lid domain D1605_RS08895 PF02861 Clp amino terminal domain, pathogenicity island component D1605_RS08895 PF10431 C-terminal, D2-small domain, of ClpB protein D1605_RS08900 PF00301 Rubredoxin D1605_RS08905 PF02581 Thiamine monophosphate synthase D1605_RS08910 PF00067 Cytochrome P450 D1605_RS08915 PF00884 Sulfatase D1605_RS08915 PF08019 Phosphoethanolamine transferase EptA/EptB D1605_RS08925 PF11741 AMIN domain D1605_RS08925 PF00263 Bacterial type II and III secretion system protein D1605_RS08925 PF03958 Bacterial type II/III secretion system short domain D1605_RS08925 PF07660 Secretin and TonB N terminus short domain D1605_RS08930 PF04351 Pilus assembly protein, PilP D1605_RS08935 PF04350 Pilus assembly protein, PilO D1605_RS08940 PF05137 Fimbrial assembly protein (PilN) D1605_RS08945 PF11104 Type IV pilus assembly protein PilM; D1605_RS08950 PF17092 Penicillin-binding protein OB-like domain D1605_RS08950 PF00905 Penicillin binding protein transpeptidase domain D1605_RS08950 PF00912 Transglycosylase D1605_RS08955 PF00248 Aldo/keto reductase family D1605_RS08960 PF00294 pfkB family carbohydrate kinase D1605_RS08965 PF05736 OprF membrane domain D1605_RS08965 PF00691 OmpA family D1605_RS08970 PF00772 DnaB-like helicase N terminal domain D1605_RS08970 PF03796 DnaB-like helicase C terminal domain D1605_RS09000 PF00067 Cytochrome P450 D1605_RS09010 PF00271 Helicase conserved C-terminal domain D1605_RS09010 PF00270 DEAD/DEAH box helicase D1605_RS09010 PF17191 RecG wedge domain D1605_RS09015 PF01042 Endoribonuclease L-PSP D1605_RS09020 PF02824 TGS domain D1605_RS09020 PF13291 ACT domain D1605_RS09020 PF04607 Region found in RelA / SpoT proteins D1605_RS09025 PF02913 FAD linked oxidases, C-terminal domain D1605_RS09025 PF01565 FAD binding domain D1605_RS09030 PF00691 OmpA family D1605_RS09030 PF05736 OprF membrane domain D1605_RS09035 PF02600 Disulfide bond formation protein DsbB D1605_RS09040 PF07715 TonB-dependent Receptor Plug Domain D1605_RS09040 PF00593 TonB dependent receptor D1605_RS09045 PF02590 Predicted SPOUT methyltransferase D1605_RS09140 PF02498 BRO family, N-terminal domain D1605_RS09140 PF10548 P22AR C-terminal domain D1605_RS09185 PF17757 UvrB interaction domain D1605_RS09185 PF04851 Type III restriction enzyme, res subunit D1605_RS09185 PF02151 UvrB/uvrC motif D1605_RS09185 PF00271 Helicase conserved C-terminal domain D1605_RS09185 PF12344 Ultra-violet resistance protein B D1605_RS09200 PF00701 Dihydrodipicolinate synthetase family D1605_RS09210 PF00578 AhpC/TSA family D1605_RS09230 PF02769 AIR synthase related protein, C-terminal domain D1605_RS09230 PF00586 AIR synthase related protein, N-terminal domain D1605_RS09235 PF01029 NusB family D1605_RS09240 PF00885 6,7-dimethyl-8-ribityllumazine synthase D1605_RS09245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase D1605_RS09245 PF00925 GTP cyclohydrolase II D1605_RS09250 PF00677 Lumazine binding domain D1605_RS09255 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region D1605_RS09255 PF01872 RibD C-terminal domain D1605_RS09260 PF03477 ATP cone domain D1605_RS09270 PF00464 Serine hydroxymethyltransferase D1605_RS09275 PF00005 ABC transporter D1605_RS09275 PF12848 ABC transporter D1605_RS09280 PF06039 Malate:quinone oxidoreductase (Mqo) D1605_RS09285 PF04134 Protein of unknown function, DUF393 D1605_RS09295 PF02578 Multi-copper polyphenol oxidoreductase laccase D1605_RS09300 PF01479 S4 domain D1605_RS09300 PF00849 RNA pseudouridylate synthase D1605_RS09305 PF13525 Outer membrane lipoprotein D1605_RS09315 PF17910 FeoB cytosolic helical domain D1605_RS09315 PF07664 Ferrous iron transport protein B C terminus D1605_RS09315 PF04023 FeoA domain D1605_RS09315 PF02421 Ferrous iron transport protein B D1605_RS09315 PF07670 Nucleoside recognition D1605_RS09325 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase D1605_RS09330 PF01189 16S rRNA methyltransferase RsmB/F D1605_RS09330 PF01029 NusB family D1605_RS09335 PF02911 Formyl transferase, C-terminal domain D1605_RS09335 PF00551 Formyl transferase D1605_RS09340 PF01327 Polypeptide deformylase D1605_RS09350 PF02481 DNA recombination-mediator protein A D1605_RS09350 PF17782 DprA winged helix domain D1605_RS09355 PF04361 Protein of unknown function (DUF494) D1605_RS09360 PF13368 Topoisomerase C-terminal repeat D1605_RS09360 PF01131 DNA topoisomerase D1605_RS09360 PF01751 Toprim domain D1605_RS09365 PF01300 Telomere recombination D1605_RS09395 PF04386 Stringent starvation protein B D1605_RS09400 PF02798 Glutathione S-transferase, N-terminal domain D1605_RS09400 PF00043 Glutathione S-transferase, C-terminal domain D1605_RS09405 PF02167 Cytochrome C1 family D1605_RS09410 PF00032 Cytochrome b(C-terminal)/b6/petD D1605_RS09410 PF00033 Cytochrome b/b6/petB D1605_RS09415 PF00355 Rieske [2Fe-2S] domain D1605_RS09415 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal D1605_RS09420 PF01464 Transglycosylase SLT domain D1605_RS09425 PF01938 TRAM domain D1605_RS09425 PF00919 Uncharacterized protein family UPF0004 D1605_RS09425 PF04055 Radical SAM superfamily D1605_RS09430 PF02562 PhoH-like protein D1605_RS09435 PF02130 Uncharacterized protein family UPF0054 D1605_RS09445 PF03471 Transporter associated domain D1605_RS09445 PF00571 CBS domain D1605_RS09455 PF01544 CorA-like Mg2+ transporter protein D1605_RS09490 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS09490 PF04829 Pre-toxin domain with VENN motif D1605_RS09490 PF05860 haemagglutination activity domain D1605_RS09490 PF13332 Hemagglutinin repeat D1605_RS09490 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS09490 PF05860 haemagglutination activity domain D1605_RS09490 PF04829 Pre-toxin domain with VENN motif D1605_RS09490 PF13332 Hemagglutinin repeat D1605_RS09510 PF00905 Penicillin binding protein transpeptidase domain D1605_RS09510 PF00912 Transglycosylase D1605_RS09510 PF14814 Bifunctional transglycosylase second domain D1605_RS09520 PF13307 Helicase C-terminal domain D1605_RS09520 PF04851 Type III restriction enzyme, res subunit D1605_RS09530 PF00484 Carbonic anhydrase D1605_RS09540 PF01522 Polysaccharide deacetylase D1605_RS09550 PF00005 ABC transporter D1605_RS09550 PF09383 NIL domain D1605_RS09555 PF00528 Binding-protein-dependent transport system inner membrane component D1605_RS09560 PF03180 NLPA lipoprotein D1605_RS09575 PF00364 Biotin-requiring enzyme D1605_RS09575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) D1605_RS09575 PF02817 e3 binding domain D1605_RS09580 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_RS09580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain D1605_RS09590 PF01545 Cation efflux family D1605_RS09595 PF01053 Cys/Met metabolism PLP-dependent enzyme D1605_RS09600 PF00561 alpha/beta hydrolase fold D1605_RS09605 PF01551 Peptidase family M23 D1605_RS09615 PF01975 Survival protein SurE D1605_RS09625 PF09335 SNARE associated Golgi protein D1605_RS09630 PF01551 Peptidase family M23 D1605_RS09630 PF01476 LysM domain D1605_RS09640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS09640 PF16736 Single Cache-like D1605_RS09640 PF00989 PAS fold D1605_RS09640 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS09645 PF00842 Alanine racemase, C-terminal domain D1605_RS09645 PF01168 Alanine racemase, N-terminal domain D1605_RS09650 PF01266 FAD dependent oxidoreductase D1605_RS09655 PF01641 SelR domain D1605_RS09660 PF01476 LysM domain D1605_RS09660 PF00704 Glycosyl hydrolases family 18 D1605_RS09665 PF00728 Glycosyl hydrolase family 20, catalytic domain D1605_RS09665 PF02838 Glycosyl hydrolase family 20, domain 2 D1605_RS09665 PF07691 PA14 domain D1605_RS09675 PF00933 Glycosyl hydrolase family 3 N terminal domain D1605_RS09675 PF07691 PA14 domain D1605_RS09675 PF14310 Fibronectin type III-like domain D1605_RS09675 PF01915 Glycosyl hydrolase family 3 C-terminal domain D1605_RS09690 PF07971 Glycosyl hydrolase family 92 D1605_RS09690 PF17678 Glycosyl hydrolase family 92 N-terminal domain D1605_RS09695 PF01301 Glycosyl hydrolases family 35 D1605_RS09700 PF04166 Pyridoxal phosphate biosynthetic protein PdxA D1605_RS09705 PF00639 PPIC-type PPIASE domain D1605_RS09705 PF09312 SurA N-terminal domain D1605_RS09710 PF03968 OstA-like protein D1605_RS09710 PF04453 LPS transport system D D1605_RS09715 PF01494 FAD binding domain D1605_RS09720 PF01494 FAD binding domain D1605_RS09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family D1605_RS09730 PF03466 LysR substrate binding domain D1605_RS09735 PF14824 Sirohaem biosynthesis protein central D1605_RS09735 PF10414 Sirohaem synthase dimerisation region D1605_RS09735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases D1605_RS09740 PF00291 Pyridoxal-phosphate dependent enzyme D1605_RS09760 PF00274 Fructose-bisphosphate aldolase class-I D1605_RS09765 PF00224 Pyruvate kinase, barrel domain D1605_RS09765 PF02887 Pyruvate kinase, alpha/beta domain D1605_RS09770 PF00162 Phosphoglycerate kinase D1605_RS09780 PF00749 tRNA synthetases class I (E and Q), catalytic domain D1605_RS09785 PF01475 Ferric uptake regulator family D1605_RS09795 PF00150 Cellulase (glycosyl hydrolase family 5) D1605_RS09795 PF00553 Cellulose binding domain D1605_RS09825 PF03330 Lytic transglycolase D1605_RS09830 PF07516 SecA Wing and Scaffold domain D1605_RS09830 PF01043 SecA preprotein cross-linking domain D1605_RS09830 PF07517 SecA DEAD-like domain D1605_RS09830 PF02810 SEC-C motif D1605_RS09835 PF08525 Opacity-associated protein A N-terminal motif D1605_RS09835 PF01476 LysM domain D1605_RS09835 PF01551 Peptidase family M23 D1605_RS09845 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase D1605_RS09850 PF12327 FtsZ family, C-terminal domain D1605_RS09850 PF00091 Tubulin/FtsZ family, GTPase domain D1605_RS09855 PF02491 SHS2 domain inserted in FTSA D1605_RS09860 PF03799 Cell division protein FtsQ D1605_RS09860 PF08478 POTRA domain, FtsQ-type D1605_RS09865 PF07478 D-ala D-ala ligase C-terminus D1605_RS09865 PF01820 D-ala D-ala ligase N-terminus D1605_RS09870 PF08245 Mur ligase middle domain D1605_RS09870 PF01225 Mur ligase family, catalytic domain D1605_RS09870 PF02875 Mur ligase family, glutamate ligase domain D1605_RS09875 PF03033 Glycosyltransferase family 28 N-terminal domain D1605_RS09875 PF04101 Glycosyltransferase family 28 C-terminal domain D1605_RS09880 PF01098 Cell cycle protein D1605_RS09885 PF00953 Glycosyl transferase family 4 D1605_RS09890 PF01225 Mur ligase family, catalytic domain D1605_RS09890 PF02875 Mur ligase family, glutamate ligase domain D1605_RS09890 PF08245 Mur ligase middle domain D1605_RS09895 PF08245 Mur ligase middle domain D1605_RS09895 PF02875 Mur ligase family, glutamate ligase domain D1605_RS09895 PF01225 Mur ligase family, catalytic domain D1605_RS09900 PF00905 Penicillin binding protein transpeptidase domain D1605_RS09900 PF03717 Penicillin-binding Protein dimerisation domain D1605_RS09905 PF04999 Cell division protein FtsL D1605_RS09910 PF01795 MraW methylase family D1605_RS09915 PF02381 MraZ protein, putative antitoxin-like D1605_RS09920 PF02080 TrkA-C domain D1605_RS09920 PF03600 Citrate transporter D1605_RS09925 PF02390 Putative methyltransferase D1605_RS09930 PF05690 Thiazole biosynthesis protein ThiG D1605_RS09935 PF05690 Thiazole biosynthesis protein ThiG D1605_RS09935 PF02597 ThiS family D1605_RS09970 PF07977 FabA-like domain D1605_RS09990 PF04273 Putative phosphatase (DUF442) D1605_RS09990 PF00753 Metallo-beta-lactamase superfamily D1605_RS10000 PF04143 Sulphur transport D1605_RS10010 PF01925 Sulfite exporter TauE/SafE D1605_RS10015 PF00692 dUTPase D1605_RS10025 PF01119 DNA mismatch repair protein, C-terminal domain D1605_RS10025 PF08676 MutL C terminal dimerisation domain D1605_RS10030 PF01520 N-acetylmuramoyl-L-alanine amidase D1605_RS10030 PF11741 AMIN domain D1605_RS10035 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE D1605_RS10040 PF01256 Carbohydrate kinase D1605_RS10040 PF03853 YjeF-related protein N-terminus D1605_RS10045 PF02601 Exonuclease VII, large subunit D1605_RS10045 PF13742 OB-fold nucleic acid binding domain D1605_RS10060 PF00570 HRDC domain D1605_RS10060 PF01612 3'-5' exonuclease D1605_RS10070 PF01728 FtsJ-like methyltransferase D1605_RS10070 PF18125 RlmM ferredoxin-like domain D1605_RS10090 PF00216 Bacterial DNA-binding protein D1605_RS10095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain D1605_RS10095 PF03483 B3/4 domain D1605_RS10095 PF01588 Putative tRNA binding domain D1605_RS10095 PF03147 Ferredoxin-fold anticodon binding domain D1605_RS10095 PF03484 tRNA synthetase B5 domain D1605_RS10100 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain D1605_RS10100 PF01409 tRNA synthetases class II core domain (F) D1605_RS10105 PF00453 Ribosomal protein L20 D1605_RS10110 PF01632 Ribosomal protein L35 D1605_RS10115 PF00707 Translation initiation factor IF-3, C-terminal domain D1605_RS10115 PF05198 Translation initiation factor IF-3, N-terminal domain D1605_RS10120 PF03129 Anticodon binding domain D1605_RS10120 PF02824 TGS domain D1605_RS10120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) D1605_RS10120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain D1605_RS10135 PF08443 RimK-like ATP-grasp domain D1605_RS10135 PF18030 RimK PreATP-grasp domain D1605_RS10140 PF00486 Transcriptional regulatory protein, C terminal D1605_RS10140 PF00072 Response regulator receiver domain D1605_RS10145 PF00672 HAMP domain D1605_RS10145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS10145 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS10150 PF01121 Dephospho-CoA kinase D1605_RS10155 PF01478 Type IV leader peptidase family D1605_RS10155 PF06750 Bacterial Peptidase A24 N-terminal domain D1605_RS10160 PF00482 Type II secretion system (T2SS), protein F D1605_RS10165 PF00114 Pilin (bacterial filament) D1605_RS10165 PF07963 Prokaryotic N-terminal methylation motif D1605_RS10175 PF00114 Pilin (bacterial filament) D1605_RS10175 PF07963 Prokaryotic N-terminal methylation motif D1605_RS10180 PF00437 Type II/IV secretion system protein D1605_RS10180 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain D1605_RS10185 PF00072 Response regulator receiver domain D1605_RS10185 PF02954 Bacterial regulatory protein, Fis family D1605_RS10185 PF00158 Sigma-54 interaction domain D1605_RS10190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS10190 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS10195 PF00549 CoA-ligase D1605_RS10195 PF08442 ATP-grasp domain D1605_RS10200 PF00549 CoA-ligase D1605_RS10200 PF02629 CoA binding domain D1605_RS10210 PF08479 POTRA domain, ShlB-type D1605_RS10210 PF17287 POTRA domain D1605_RS10210 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB D1605_RS10220 PF03989 DNA gyrase C-terminal domain, beta-propeller D1605_RS10220 PF00521 DNA gyrase/topoisomerase IV, subunit A D1605_RS10225 PF01008 Initiation factor 2 subunit family D1605_RS10235 PF00152 tRNA synthetases class II (D, K and N) D1605_RS10245 PF00533 BRCA1 C Terminus (BRCT) domain D1605_RS10245 PF01653 NAD-dependent DNA ligase adenylation domain D1605_RS10245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain D1605_RS10245 PF03120 NAD-dependent DNA ligase OB-fold domain D1605_RS10245 PF12826 Helix-hairpin-helix motif D1605_RS10250 PF04354 ZipA, C-terminal FtsZ-binding domain D1605_RS10255 PF02463 RecF/RecN/SMC N terminal domain D1605_RS10260 PF01281 Ribosomal protein L9, N-terminal domain D1605_RS10260 PF03948 Ribosomal protein L9, C-terminal domain D1605_RS10265 PF01084 Ribosomal protein S18 D1605_RS10270 PF01250 Ribosomal protein S6 D1605_RS10275 PF01521 Iron-sulphur cluster biosynthesis D1605_RS10280 PF00152 tRNA synthetases class II (D, K and N) D1605_RS10280 PF01336 OB-fold nucleic acid binding domain D1605_RS10285 PF01061 ABC-2 type transporter D1605_RS10290 PF00005 ABC transporter D1605_RS10305 PF01180 Dihydroorotate dehydrogenase D1605_RS10310 PF01565 FAD binding domain D1605_RS10310 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain D1605_RS10315 PF00892 EamA-like transporter family D1605_RS10320 PF01569 PAP2 superfamily D1605_RS10325 PF04551 GcpE protein D1605_RS10335 PF00072 Response regulator receiver domain D1605_RS10340 PF00889 Elongation factor TS D1605_RS10345 PF00318 Ribosomal protein S2 D1605_RS10355 PF00005 ABC transporter D1605_RS10355 PF00664 ABC transporter transmembrane region D1605_RS10365 PF02321 Outer membrane efflux protein D1605_RS10370 PF00149 Calcineurin-like phosphoesterase D1605_RS10375 PF02541 Ppx/GppA phosphatase family D1605_RS10380 PF02503 Polyphosphate kinase middle domain D1605_RS10380 PF17941 Polyphosphate kinase C-terminal domain 1 D1605_RS10380 PF13090 Polyphosphate kinase C-terminal domain 2 D1605_RS10380 PF13089 Polyphosphate kinase N-terminal domain D1605_RS10385 PF00989 PAS fold D1605_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase D1605_RS10385 PF00512 His Kinase A (phospho-acceptor) domain D1605_RS10385 PF11808 Phosphate regulon sensor protein PhoR D1605_RS10390 PF00486 Transcriptional regulatory protein, C terminal D1605_RS10390 PF00072 Response regulator receiver domain D1605_RS10395 PF01435 Peptidase family M48 D1605_RS10395 PF13181 Tetratricopeptide repeat D1605_RS10400 PF00462 Glutaredoxin D1605_RS10405 PF18324 Hypothetical protein TT1725 D1605_RS10405 PF00180 Isocitrate/isopropylmalate dehydrogenase D1605_RS10415 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain D1605_RS10415 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain D1605_RS10420 PF00884 Sulfatase D1605_RS10420 PF11893 Domain of unknown function (DUF3413) D1605_RS10425 PF00037 4Fe-4S binding domain D1605_RS10425 PF11953 Domain of unknown function (DUF3470) D1605_RS10435 PF01106 NifU-like domain D1605_RS10440 PF01329 Pterin 4 alpha carbinolamine dehydratase D1605_RS10450 PF00849 RNA pseudouridylate synthase D1605_RS10450 PF01479 S4 domain D1605_RS10455 PF10150 Ribonuclease E/G family D1605_RS10455 PF00575 S1 RNA binding domain D1605_RS10455 PF12111 Polyribonucleotide phosphorylase C terminal D1605_RS10460 PF00196 Bacterial regulatory proteins, luxR family D1605_RS10460 PF00072 Response regulator receiver domain D1605_RS10465 PF17773 UPF0176 acylphosphatase like domain D1605_RS10475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain D1605_RS10475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain D1605_RS10480 PF00545 ribonuclease D1605_RS10490 PF12848 ABC transporter D1605_RS10490 PF16326 ABC transporter C-terminal domain D1605_RS10490 PF00005 ABC transporter D1605_RS10500 PF02696 Uncharacterized ACR, YdiU/UPF0061 family D1605_RS10505 PF00313 'Cold-shock' DNA-binding domain D1605_RS10510 PF00990 Diguanylate cyclase, GGDEF domain D1605_RS10510 PF00563 EAL domain D1605_RS10510 PF00072 Response regulator receiver domain D1605_RS10515 PF01435 Peptidase family M48 D1605_RS10520 PF03144 Elongation factor Tu domain 2 D1605_RS10520 PF00009 Elongation factor Tu GTP binding domain D1605_RS10520 PF03143 Elongation factor Tu C-terminal domain D1605_RS10525 PF00679 Elongation factor G C-terminus D1605_RS10525 PF03144 Elongation factor Tu domain 2 D1605_RS10525 PF14492 Elongation Factor G, domain II D1605_RS10525 PF03764 Elongation factor G, domain IV D1605_RS10525 PF00009 Elongation factor Tu GTP binding domain D1605_RS10530 PF00177 Ribosomal protein S7p/S5e D1605_RS10535 PF00164 Ribosomal protein S12/S23 D1605_RS10540 PF04983 RNA polymerase Rpb1, domain 3 D1605_RS10540 PF04997 RNA polymerase Rpb1, domain 1 D1605_RS10540 PF00623 RNA polymerase Rpb1, domain 2 D1605_RS10540 PF04998 RNA polymerase Rpb1, domain 5 D1605_RS10540 PF05000 RNA polymerase Rpb1, domain 4 D1605_RS10545 PF04561 RNA polymerase Rpb2, domain 2 D1605_RS10545 PF00562 RNA polymerase Rpb2, domain 6 D1605_RS10545 PF10385 RNA polymerase beta subunit external 1 domain D1605_RS10545 PF04565 RNA polymerase Rpb2, domain 3 D1605_RS10545 PF04563 RNA polymerase beta subunit D1605_RS10545 PF04560 RNA polymerase Rpb2, domain 7 D1605_RS10550 PF00542 Ribosomal protein L7/L12 C-terminal domain D1605_RS10550 PF16320 Ribosomal protein L7/L12 dimerisation domain D1605_RS10555 PF00466 Ribosomal protein L10 D1605_RS10560 PF00687 Ribosomal protein L1p/L10e family D1605_RS10565 PF00298 Ribosomal protein L11, RNA binding domain D1605_RS10565 PF03946 Ribosomal protein L11, N-terminal domain D1605_RS10570 PF00467 KOW motif D1605_RS10570 PF02357 Transcription termination factor nusG D1605_RS10585 PF03144 Elongation factor Tu domain 2 D1605_RS10585 PF00009 Elongation factor Tu GTP binding domain D1605_RS10585 PF03143 Elongation factor Tu C-terminal domain D1605_RS10605 PF06071 Protein of unknown function (DUF933) D1605_RS10605 PF01926 50S ribosome-binding GTPase D1605_RS10610 PF01195 Peptidyl-tRNA hydrolase D1605_RS10615 PF14693 Ribosomal protein TL5, C-terminal domain D1605_RS10615 PF01386 Ribosomal L25p family D1605_RS10620 PF14572 Phosphoribosyl synthetase-associated domain D1605_RS10620 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase D1605_RS10630 PF08544 GHMP kinases C terminal D1605_RS10630 PF00288 GHMP kinases N terminal domain D1605_RS10635 PF03550 Outer membrane lipoprotein LolB D1605_RS10645 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain D1605_RS10645 PF01488 Shikimate / quinate 5-dehydrogenase D1605_RS10645 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain D1605_RS10650 PF03462 PCRF domain D1605_RS10650 PF00472 RF-1 domain D1605_RS10655 PF01170 Putative RNA methylase family UPF0020 D1605_RS10655 PF02926 THUMP domain D1605_RS10655 PF10672 S-adenosylmethionine-dependent methyltransferase D1605_RS10695 PF01914 MarC family integral membrane protein D1605_RS10705 PF00462 Glutaredoxin D1605_RS10710 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain D1605_RS10710 PF02222 ATP-grasp domain D1605_RS10715 PF00731 AIR carboxylase D1605_RS10730 PF07732 Multicopper oxidase D1605_RS10730 PF07731 Multicopper oxidase D1605_RS10740 PF13361 UvrD-like helicase C-terminal domain D1605_RS10740 PF00580 UvrD/REP helicase N-terminal domain D1605_RS10745 PF04349 Periplasmic glucan biosynthesis protein, MdoG D1605_RS10750 PF01343 Peptidase family S49 D1605_RS10755 PF01554 MatE D1605_RS10770 PF17764 3′ DNA-binding domain (3′BD) D1605_RS10770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain D1605_RS10770 PF00270 DEAD/DEAH box helicase D1605_RS10770 PF00271 Helicase conserved C-terminal domain D1605_RS10770 PF18074 Primosomal protein N C-terminal domain D1605_RS10780 PF04542 Sigma-70 region 2 D1605_RS10780 PF04545 Sigma-70, region 4 D1605_RS10785 PF03167 Uracil DNA glycosylase superfamily D1605_RS10790 PF00072 Response regulator receiver domain D1605_RS10790 PF01339 CheB methylesterase D1605_RS10795 PF18075 FtsX extracellular domain D1605_RS10800 PF00005 ABC transporter D1605_RS10805 PF00270 DEAD/DEAH box helicase D1605_RS10805 PF00271 Helicase conserved C-terminal domain D1605_RS10805 PF12300 ATP-dependent RNA helicase RhlB D1605_RS10810 PF00085 Thioredoxin D1605_RS10815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain D1605_RS10815 PF07497 Rho termination factor, RNA-binding domain D1605_RS10815 PF07498 Rho termination factor, N-terminal domain D1605_RS10820 PF03971 Monomeric isocitrate dehydrogenase D1605_RS10830 PF03572 Peptidase family S41 D1605_RS10830 PF13180 PDZ domain D1605_RS10835 PF01551 Peptidase family M23 D1605_RS10850 PF00150 Cellulase (glycosyl hydrolase family 5) D1605_RS10855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster D1605_RS10855 PF07992 Pyridine nucleotide-disulphide oxidoreductase D1605_RS10860 PF00310 Glutamine amidotransferases class-II D1605_RS10860 PF04898 Glutamate synthase central domain D1605_RS10860 PF01645 Conserved region in glutamate synthase D1605_RS10860 PF01493 GXGXG motif D1605_RS10865 PF14748 Pyrroline-5-carboxylate reductase dimerisation D1605_RS10865 PF03807 NADP oxidoreductase coenzyme F420-dependent D1605_RS10910 PF18766 SWI2/SNF2 ATPase D1605_RS10910 PF11867 Domain of unknown function (DUF3387) D1605_RS10910 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1605_RS10920 PF12161 HsdM N-terminal domain D1605_RS10920 PF02384 N-6 DNA Methylase D1605_RS10930 PF18766 SWI2/SNF2 ATPase D1605_RS10930 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) D1605_RS10930 PF12008 Type I restriction and modification enzyme - subunit R C terminal D1605_RS10935 PF01420 Type I restriction modification DNA specificity domain D1605_RS10945 PF12161 HsdM N-terminal domain D1605_RS10945 PF02384 N-6 DNA Methylase D1605_RS10950 PF01810 LysE type translocator D1605_RS10960 PF11855 Protein of unknown function (DUF3375) D1605_RS11055 PF06594 Haemolysin-type calcium binding protein related domain D1605_RS11055 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_RS11070 PF06594 Haemolysin-type calcium binding protein related domain D1605_RS11070 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) D1605_RS11105 PF01381 Helix-turn-helix D1605_RS11110 PF05973 Phage derived protein Gp49-like (DUF891) D1605_RS11185 PF13018 Extended Signal Peptide of Type V secretion system D1605_RS11185 PF13332 Hemagglutinin repeat D1605_RS11185 PF05860 haemagglutination activity domain D1605_RS11185 PF04829 Pre-toxin domain with VENN motif D1605_RS11190 PF01926 50S ribosome-binding GTPase D1605_RS11190 PF10396 GTP-binding protein TrmE N-terminus D1605_RS11190 PF12631 MnmE helical domain D1605_RS11200 PF14849 YidC periplasmic domain D1605_RS11200 PF02096 60Kd inner membrane protein D1605_RS11205 PF00825 Ribonuclease P D1605_RS11210 PF00468 Ribosomal protein L34 D1605_RS11215 PF10502 Signal peptidase, peptidase S26 D1605_RS11220 PF01751 Toprim domain D1605_RS11220 PF01131 DNA topoisomerase D1605_RS11230 PF13362 Toprim domain D1605_RS11230 PF18818 Metallopeptidase superfamily domain D1605_RS11230 PF08401 Domain of unknown function (DUF1738) D1605_RS11255 PF00239 Resolvase, N terminal domain D1605_RS11290 PF03743 Bacterial conjugation TrbI-like protein D1605_RS11300 PF03524 Conjugal transfer protein D1605_RS11310 PF03135 CagE, TrbE, VirB family, component of type IV transporter system D1605_RS11325 PF00437 Type II/IV secretion system protein D1605_RS11330 PF16509 TrfB plasmid transcriptional repressor D1605_RS11335 PF00436 Single-strand binding protein family D1605_RS11350 PF17394 Uncharacterized KleE stable inheritance protein D1605_RS11355 PF12323 Helix-turn-helix domain D1605_RS11355 PF07282 Putative transposase DNA-binding domain D1605_RS11355 PF01385 Probable transposase D1605_RS11365 PF16509 TrfB plasmid transcriptional repressor D1605_RS11370 PF13614 AAA domain D1605_RS11375 PF08535 KorB domain D1605_RS11375 PF06613 KorB C-terminal beta-barrel domain D1605_RS11375 PF02195 ParB-like nuclease domain D1605_RS11390 PF11657 Transcriptional activator TraM D1605_RS11395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain D1605_RS11410 PF18821 Large polyvalent protein-associated domain 7 D1605_RS11410 PF03432 Relaxase/Mobilisation nuclease domain D1605_RS11415 PF02534 Type IV secretory system Conjugative DNA transfer