B9J09_RS00005	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
B9J09_RS00010	SM00480	DNA polymerase III beta subunit
B9J09_RS00025	SM00387	Histidine kinase-like ATPases
B9J09_RS00025	SM00433	TopoisomeraseII
B9J09_RS00040	SM00028	Tetratricopeptide repeats
B9J09_RS00145	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
B9J09_RS00190	SM00487	DEAD-like helicases superfamily
B9J09_RS00190	SM00490	helicase superfamily c-terminal domain
B9J09_RS00190	SM00982	B9J09_RS00190
B9J09_RS00190	SM01058	CarD-like/TRCF domain
B9J09_RS00210	SM00878	Biotin carboxylase C-terminal domain
B9J09_RS00245	SM00470	ParB-like nuclease domain
B9J09_RS00255	SM00729	Elongator protein 3, MiaB family, Radical SAM
B9J09_RS00255	SM00876	Biotin and Thiamin Synthesis associated domain
B9J09_RS00305	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
B9J09_RS00305	SM01232	B9J09_RS00305
B9J09_RS00315	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS00315	SM00962	SRP54-type protein, GTPase domain
B9J09_RS00315	SM00963	SRP54-type protein, helical bundle domain
B9J09_RS00390	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS00400	SM01103	B9J09_RS00400
B9J09_RS00440	SM00812	Alpha-L-fucosidase
B9J09_RS00495	SM01172	B9J09_RS00495
B9J09_RS00500	SM00710	Parallel beta-helix repeats
B9J09_RS00500	SM00722	Domain present in carbohydrate binding proteins and sugar hydrolses
B9J09_RS00515	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS00520	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B9J09_RS00630	SM00836	DALR anticodon binding domain
B9J09_RS00630	SM01016	Arginyl tRNA synthetase N terminal dom
B9J09_RS00675	SM00645	Papain family cysteine protease
B9J09_RS00750	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
B9J09_RS00750	SM01232	B9J09_RS00750
B9J09_RS00765	SM00822	B9J09_RS00765
B9J09_RS00850	SM00487	DEAD-like helicases superfamily
B9J09_RS00850	SM00490	helicase superfamily c-terminal domain
B9J09_RS00870	SM00563	Phosphate acyltransferases
B9J09_RS00895	SM00481	DNA polymerase alpha chain like domain
B9J09_RS00905	SM00271	DnaJ molecular chaperone homology domain
B9J09_RS00945	SM00347	helix_turn_helix multiple antibiotic resistance protein
B9J09_RS00980	SM01323	B9J09_RS00980
B9J09_RS01045	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS01045	SM00322	K homology RNA-binding domain
B9J09_RS01065	SM01387	B9J09_RS01065
B9J09_RS01070	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS01070	SM00322	K homology RNA-binding domain
B9J09_RS01125	SM00487	DEAD-like helicases superfamily
B9J09_RS01125	SM00490	helicase superfamily c-terminal domain
B9J09_RS01135	SM00893	Electron transfer flavoprotein domain
B9J09_RS01140	SM00893	Electron transfer flavoprotein domain
B9J09_RS01265	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B9J09_RS01295	SM00966	SpoVT / AbrB like domain 
B9J09_RS01405	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
B9J09_RS01410	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
B9J09_RS01465	SM00448	cheY-homologous receiver domain
B9J09_RS01465	SM00862	Transcriptional regulatory protein, C terminal
B9J09_RS01470	SM00387	Histidine kinase-like ATPases
B9J09_RS01470	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS01560	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B9J09_RS01560	SM00954	Region found in RelA / SpoT proteins
B9J09_RS01570	SM00487	DEAD-like helicases superfamily
B9J09_RS01570	SM00490	helicase superfamily c-terminal domain
B9J09_RS01635	SM00965	Secretin and TonB N terminus short domain
B9J09_RS01665	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS01665	SM01086	C-terminal, D2-small domain, of ClpB protein
B9J09_RS01695	SM00448	cheY-homologous receiver domain
B9J09_RS01695	SM00862	Transcriptional regulatory protein, C terminal
B9J09_RS01700	SM00387	Histidine kinase-like ATPases
B9J09_RS01750	SM00387	Histidine kinase-like ATPases
B9J09_RS01765	SM00052	Putative diguanylate phosphodiesterase
B9J09_RS01765	SM00448	cheY-homologous receiver domain
B9J09_RS01805	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS01845	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS01880	SM00400	zinc finger
B9J09_RS01880	SM00493	B9J09_RS01880
B9J09_RS01880	SM00766	DNA primase DnaG DnaB-binding
B9J09_RS01905	SM00905	Dihydroneopterin aldolase
B9J09_RS01915	SM01217	B9J09_RS01915
B9J09_RS01945	SM00528	Domain in histone-like proteins of HNS family
B9J09_RS01960	SM00448	cheY-homologous receiver domain
B9J09_RS01965	SM00829	Enoylreductase
B9J09_RS01970	SM00244	prohibitin homologues
B9J09_RS01975	SM00244	prohibitin homologues
B9J09_RS01985	SM00788	Adenylosuccinate synthetase
B9J09_RS01990	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
B9J09_RS01995	SM00562	B9J09_RS01995
B9J09_RS02005	SM00028	Tetratricopeptide repeats
B9J09_RS02020	SM00564	beta-propeller repeat
B9J09_RS02025	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS02030	SM00450	Rhodanese Homology Domain
B9J09_RS02045	SM00052	Putative diguanylate phosphodiesterase
B9J09_RS02320	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS02360	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
B9J09_RS02385	SM00116	Domain in cystathionine beta-synthase and other proteins.
B9J09_RS02440	SM00883	Chaperonin 10 Kd subunit
B9J09_RS02520	SM00478	endonuclease III
B9J09_RS02520	SM00525	B9J09_RS02520
B9J09_RS02530	SM01160	B9J09_RS02530
B9J09_RS02570	SM00977	TilS substrate C-terminal domain
B9J09_RS02615	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
B9J09_RS02620	SM00822	B9J09_RS02620
B9J09_RS02630	SM00825	Beta-ketoacyl synthase
B9J09_RS02685	SM00841	Elongation factor P, C-terminal
B9J09_RS02685	SM01185	B9J09_RS02685
B9J09_RS02770	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS02790	SM00363	S4 RNA-binding domain
B9J09_RS02870	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS02875	SM00411	bacterial (prokaryotic) histone like domain
B9J09_RS02885	SM00028	Tetratricopeptide repeats
B9J09_RS02910	SM00116	Domain in cystathionine beta-synthase and other proteins.
B9J09_RS02910	SM01240	B9J09_RS02910
B9J09_RS02960	SM00904	Riboflavin kinase
B9J09_RS03070	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS03090	SM00450	Rhodanese Homology Domain
B9J09_RS03115	SM00829	Enoylreductase
B9J09_RS03170	SM01329	B9J09_RS03170
B9J09_RS03225	SM00448	cheY-homologous receiver domain
B9J09_RS03235	SM01118	B9J09_RS03235
B9J09_RS03255	SM00357	Cold shock protein domain
B9J09_RS03260	SM00869	Autotransporter beta-domain
B9J09_RS03310	SM00271	DnaJ molecular chaperone homology domain
B9J09_RS03325	SM00448	cheY-homologous receiver domain
B9J09_RS03325	SM00862	Transcriptional regulatory protein, C terminal
B9J09_RS03360	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS03380	SM00830	Chorismate mutase type II
B9J09_RS03440	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B9J09_RS03440	SM00465	GIY-YIG type nucleases (URI domain)
B9J09_RS03470	SM01004	Delta-aminolevulinic acid dehydratase
B9J09_RS03495	SM00226	Low molecular weight phosphatase family
B9J09_RS03505	SM00487	DEAD-like helicases superfamily
B9J09_RS03510	SM01252	B9J09_RS03510
B9J09_RS03520	SM00990	B9J09_RS03520
B9J09_RS03525	SM00482	DNA polymerase A domain
B9J09_RS03555	SM00849	Metallo-beta-lactamase superfamily
B9J09_RS03565	SM00470	ParB-like nuclease domain
B9J09_RS03580	SM01259	B9J09_RS03580
B9J09_RS03655	SM00564	beta-propeller repeat
B9J09_RS03685	SM00861	Transketolase, pyrimidine binding domain
B9J09_RS03700	SM00358	Double-stranded RNA binding motif
B9J09_RS03700	SM00535	Ribonuclease III family
B9J09_RS03715	SM00838	Elongation factor G C-terminus
B9J09_RS03720	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B9J09_RS03755	SM00271	DnaJ molecular chaperone homology domain
B9J09_RS03770	SM00936	Penicillin-binding protein 5, C-terminal domain 
B9J09_RS03785	SM00732	Likely ribonuclease with RNase H fold.
B9J09_RS03870	SM01007	Class II Aldolase and Adducin N-terminal domain
B9J09_RS03895	SM00841	Elongation factor P, C-terminal
B9J09_RS03895	SM01185	B9J09_RS03895
B9J09_RS04060	SM00028	Tetratricopeptide repeats
B9J09_RS04065	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS04065	SM00732	Likely ribonuclease with RNase H fold.
B9J09_RS04080	SM00849	Metallo-beta-lactamase superfamily
B9J09_RS04095	SM00479	B9J09_RS04095
B9J09_RS04100	SM00331	Sigma factor PP2C-like phosphatases
B9J09_RS04100	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
B9J09_RS04145	SM00650	Ribosomal RNA adenine dimethylases
B9J09_RS04150	SM00479	B9J09_RS04150
B9J09_RS04160	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS04205	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS04230	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS04255	SM00400	zinc finger
B9J09_RS04365	SM01228	B9J09_RS04365
B9J09_RS04565	SM00857	Resolvase, N terminal domain
B9J09_RS04575	SM00493	B9J09_RS04575
B9J09_RS04580	SM00849	Metallo-beta-lactamase superfamily
B9J09_RS04590	SM00479	B9J09_RS04590
B9J09_RS04650	SM01011	Aminopeptidase P, N-terminal domain
B9J09_RS04710	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS04750	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS04750	SM00357	Cold shock protein domain
B9J09_RS04750	SM00955	B9J09_RS04750
B9J09_RS04760	SM00967	RNA 2'-O ribose methyltransferase substrate binding
B9J09_RS04795	SM01209	B9J09_RS04795
B9J09_RS04795	SM01210	B9J09_RS04795
B9J09_RS04800	SM00798	AICARFT/IMPCHase bienzyme
B9J09_RS04800	SM00851	MGS-like domain
B9J09_RS04895	SM00448	cheY-homologous receiver domain
B9J09_RS04900	SM00260	Two component signalling adaptor domain
B9J09_RS04905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
B9J09_RS04910	SM00073	Histidine Phosphotransfer domain
B9J09_RS04910	SM00260	Two component signalling adaptor domain
B9J09_RS04910	SM00387	Histidine kinase-like ATPases
B9J09_RS04910	SM00448	cheY-homologous receiver domain
B9J09_RS04910	SM01231	B9J09_RS04910
B9J09_RS04955	SM00411	bacterial (prokaryotic) histone like domain
B9J09_RS04985	SM00861	Transketolase, pyrimidine binding domain
B9J09_RS05120	SM00507	HNH nucleases
B9J09_RS05130	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS05130	SM00962	SRP54-type protein, GTPase domain
B9J09_RS05130	SM00963	SRP54-type protein, helical bundle domain
B9J09_RS05135	SM00478	endonuclease III
B9J09_RS05135	SM00525	B9J09_RS05135
B9J09_RS05160	SM00278	Helix-hairpin-helix DNA-binding motif class 1
B9J09_RS05170	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS05215	SM00855	Phosphoglycerate mutase family
B9J09_RS05250	SM00855	Phosphoglycerate mutase family
B9J09_RS05680	SM00245	tail specific protease
B9J09_RS05695	SM00869	Autotransporter beta-domain
B9J09_RS05810	SM00885	D5 N terminal like
B9J09_RS05815	SM01040	BRO family, N-terminal domain
B9J09_RS05850	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS05915	SM01040	BRO family, N-terminal domain
B9J09_RS05920	SM00482	DNA polymerase A domain
B9J09_RS05925	SM00990	B9J09_RS05925
B9J09_RS05935	SM00487	DEAD-like helicases superfamily
B9J09_RS05950	SM00387	Histidine kinase-like ATPases
B9J09_RS05950	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS05955	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS05955	SM00448	cheY-homologous receiver domain
B9J09_RS05970	SM00938	Nitrogen regulatory protein P-II
B9J09_RS05975	SM01230	B9J09_RS05975
B9J09_RS05985	SM00867	YceI-like domain 
B9J09_RS06030	SM00833	Cobalamin synthesis protein cobW C-terminal domain
B9J09_RS06055	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B9J09_RS06055	SM00245	tail specific protease
B9J09_RS06080	SM00917	LeuA allosteric (dimerisation) domain
B9J09_RS06115	SM00460	Transglutaminase/protease-like homologues
B9J09_RS06130	SM00493	B9J09_RS06130
B9J09_RS06140	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS06175	SM00450	Rhodanese Homology Domain
B9J09_RS06245	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
B9J09_RS06245	SM00534	ATPase domain of DNA mismatch repair MUTS family
B9J09_RS06505	SM01040	BRO family, N-terminal domain
B9J09_RS06510	SM01040	BRO family, N-terminal domain
B9J09_RS06545	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS06625	SM01040	BRO family, N-terminal domain
B9J09_RS06650	SM00248	ankyrin repeats
B9J09_RS06660	SM00825	Beta-ketoacyl synthase
B9J09_RS06690	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS06720	SM00448	cheY-homologous receiver domain
B9J09_RS06720	SM00850	LytTr DNA-binding domain
B9J09_RS06750	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B9J09_RS06795	SM00984	UDP binding domain
B9J09_RS06815	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS06865	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS07105	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
B9J09_RS07110	SM00861	Transketolase, pyrimidine binding domain
B9J09_RS07145	SM00100	Cyclic nucleotide-monophosphate binding domain
B9J09_RS07145	SM00419	helix_turn_helix, cAMP Regulatory protein
B9J09_RS07260	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07305	SM00729	Elongator protein 3, MiaB family, Radical SAM
B9J09_RS07325	SM00072	Guanylate kinase homologues.
B9J09_RS07330	SM01409	B9J09_RS07330
B9J09_RS07370	SM00028	Tetratricopeptide repeats
B9J09_RS07375	SM00528	Domain in histone-like proteins of HNS family
B9J09_RS07380	SM00347	helix_turn_helix multiple antibiotic resistance protein
B9J09_RS07390	SM01263	B9J09_RS07390
B9J09_RS07405	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07405	SM01086	C-terminal, D2-small domain, of ClpB protein
B9J09_RS07440	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
B9J09_RS07455	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07510	SM00354	helix_turn _helix lactose operon repressor
B9J09_RS07550	SM00387	Histidine kinase-like ATPases
B9J09_RS07550	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS07550	SM00448	cheY-homologous receiver domain
B9J09_RS07560	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07575	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07575	SM00843	B9J09_RS07575
B9J09_RS07595	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS07605	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07605	SM01086	C-terminal, D2-small domain, of ClpB protein
B9J09_RS07685	SM01211	B9J09_RS07685
B9J09_RS07730	SM00116	Domain in cystathionine beta-synthase and other proteins.
B9J09_RS07750	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07855	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07855	SM00487	DEAD-like helicases superfamily
B9J09_RS07855	SM00490	helicase superfamily c-terminal domain
B9J09_RS07855	SM00847	Helicase associated domain (HA2)  Add an annotation
B9J09_RS07865	SM00341	Helicase and RNase D C-terminal
B9J09_RS07865	SM00487	DEAD-like helicases superfamily
B9J09_RS07865	SM00490	helicase superfamily c-terminal domain
B9J09_RS07865	SM00956	B9J09_RS07865
B9J09_RS07880	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS07910	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B9J09_RS07955	SM00849	Metallo-beta-lactamase superfamily
B9J09_RS07985	SM00347	helix_turn_helix multiple antibiotic resistance protein
B9J09_RS07990	SM00434	DNA Topoisomerase IV
B9J09_RS08005	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08080	SM00387	Histidine kinase-like ATPases
B9J09_RS08080	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS08080	SM00448	cheY-homologous receiver domain
B9J09_RS08085	SM00867	YceI-like domain 
B9J09_RS08095	SM00867	YceI-like domain 
B9J09_RS08100	SM00478	endonuclease III
B9J09_RS08145	SM00954	Region found in RelA / SpoT proteins
B9J09_RS08175	SM00268	Actin
B9J09_RS08225	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08255	SM00463	Small MutS-related domain
B9J09_RS08275	SM01192	B9J09_RS08275
B9J09_RS08275	SM01193	B9J09_RS08275
B9J09_RS08295	SM00387	Histidine kinase-like ATPases
B9J09_RS08295	SM00433	TopoisomeraseII
B9J09_RS08310	SM00116	Domain in cystathionine beta-synthase and other proteins.
B9J09_RS08310	SM01091	Transporter associated domain
B9J09_RS08345	SM00729	Elongator protein 3, MiaB family, Radical SAM
B9J09_RS08350	SM00637	B9J09_RS08350
B9J09_RS08385	SM00479	B9J09_RS08385
B9J09_RS08395	SM00342	helix_turn_helix, arabinose operon control protein
B9J09_RS08405	SM01359	B9J09_RS08405
B9J09_RS08405	SM01360	B9J09_RS08405
B9J09_RS08585	SM00487	DEAD-like helicases superfamily
B9J09_RS08585	SM00490	helicase superfamily c-terminal domain
B9J09_RS08585	SM00847	Helicase associated domain (HA2)  Add an annotation
B9J09_RS08610	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08620	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08655	SM00838	Elongation factor G C-terminus
B9J09_RS08675	SM00155	Phospholipase D. Active site motifs.
B9J09_RS08770	SM00411	bacterial (prokaryotic) histone like domain
B9J09_RS08775	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08775	SM00464	Found in ATP-dependent protease La (LON)
B9J09_RS08780	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08780	SM00994	ClpX C4-type zinc finger
B9J09_RS08780	SM01086	C-terminal, D2-small domain, of ClpB protein
B9J09_RS08805	SM00984	UDP binding domain
B9J09_RS08825	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS08840	SM00662	RNA polymerases D
B9J09_RS08845	SM00363	S4 RNA-binding domain
B9J09_RS08845	SM01390	B9J09_RS08845
B9J09_RS08905	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
B9J09_RS08910	SM01374	B9J09_RS08910
B9J09_RS08930	SM00322	K homology RNA-binding domain
B9J09_RS08945	SM01382	B9J09_RS08945
B9J09_RS08945	SM01383	B9J09_RS08945
B9J09_RS08965	SM01403	B9J09_RS08965
B9J09_RS09005	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS09015	SM00830	Chorismate mutase type II
B9J09_RS09075	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS09125	SM00387	Histidine kinase-like ATPases
B9J09_RS09125	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS09125	SM00448	cheY-homologous receiver domain
B9J09_RS09130	SM00448	cheY-homologous receiver domain
B9J09_RS09130	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
B9J09_RS09140	SM00937	B9J09_RS09140
B9J09_RS09160	SM00851	MGS-like domain
B9J09_RS09160	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
B9J09_RS09165	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
B9J09_RS09180	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
B9J09_RS09180	SM00474	3'-5' exonuclease
B9J09_RS09180	SM00475	5'-3' exonuclease
B9J09_RS09180	SM00482	DNA polymerase A domain
B9J09_RS09220	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS09225	SM00155	Phospholipase D. Active site motifs.
B9J09_RS09230	SM00867	YceI-like domain 
B9J09_RS09235	SM00855	Phosphoglycerate mutase family
B9J09_RS09250	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS09265	SM00849	Metallo-beta-lactamase superfamily
B9J09_RS09270	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS09320	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS09420	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B9J09_RS09460	SM00996	S-adenosyl-L-homocysteine hydrolase
B9J09_RS09460	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
B9J09_RS09480	SM00563	Phosphate acyltransferases
B9J09_RS09485	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
B9J09_RS09500	SM00869	Autotransporter beta-domain
B9J09_RS09535	SM00529	Helix-turn-helix diphteria tox regulatory element
B9J09_RS09580	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
B9J09_RS09590	SM00859	Semialdehyde dehydrogenase, NAD binding domain
B9J09_RS09625	SM00840	B9J09_RS09625
B9J09_RS09650	SM01234	B9J09_RS09650
B9J09_RS09665	SM00267	diguanylate cyclase
B9J09_RS09700	SM00387	Histidine kinase-like ATPases
B9J09_RS09705	SM00919	Malic enzyme, NAD binding domain
B9J09_RS09705	SM01274	B9J09_RS09705
B9J09_RS09730	SM00421	helix_turn_helix, Lux Regulon
B9J09_RS09730	SM00448	cheY-homologous receiver domain
B9J09_RS09760	SM00487	DEAD-like helicases superfamily
B9J09_RS09760	SM00490	helicase superfamily c-terminal domain
B9J09_RS09775	SM01130	B9J09_RS09775
B9J09_RS09860	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS09880	SM00363	S4 RNA-binding domain
B9J09_RS09900	SM00899	B9J09_RS09900
B9J09_RS09925	SM00257	Lysin motif
B9J09_RS09945	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B9J09_RS09945	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B9J09_RS09945	SM00493	B9J09_RS09945
B9J09_RS09970	SM00530	Helix-turn-helix XRE-family like proteins 
B9J09_RS10010	SM00729	Elongator protein 3, MiaB family, Radical SAM
B9J09_RS10030	SM00116	Domain in cystathionine beta-synthase and other proteins.
B9J09_RS10030	SM01091	Transporter associated domain
B9J09_RS10105	SM00491	B9J09_RS10105
B9J09_RS10115	SM00947	Carbonic anhydrase
B9J09_RS10140	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS10140	SM00930	B9J09_RS10140
B9J09_RS10225	SM00257	Lysin motif
B9J09_RS10235	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
B9J09_RS10235	SM00091	PAS domain
B9J09_RS10235	SM00387	Histidine kinase-like ATPases
B9J09_RS10235	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS10245	SM01005	Alanine racemase, C-terminal domain
B9J09_RS10260	SM00636	B9J09_RS10260
B9J09_RS10275	SM00758	B9J09_RS10275
B9J09_RS10275	SM01217	B9J09_RS10275
B9J09_RS10285	SM01149	B9J09_RS10285
B9J09_RS10405	SM00637	B9J09_RS10405
B9J09_RS10435	SM00957	SecA DEAD-like domain
B9J09_RS10435	SM00958	SecA preprotein cross-linking domain
B9J09_RS10460	SM00864	Tubulin/FtsZ family, GTPase domain
B9J09_RS10460	SM00865	Tubulin/FtsZ family, C-terminal domain
B9J09_RS10465	SM00842	Cell division protein FtsA
B9J09_RS10560	SM00869	Autotransporter beta-domain
B9J09_RS10640	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
B9J09_RS10670	SM00853	MutL C terminal dimerisation domain
B9J09_RS10670	SM01340	B9J09_RS10670
B9J09_RS10675	SM00646	B9J09_RS10675
B9J09_RS10710	SM00474	3'-5' exonuclease
B9J09_RS10715	SM00528	Domain in histone-like proteins of HNS family
B9J09_RS10735	SM00422	helix_turn_helix, mercury resistance
B9J09_RS10740	SM00411	bacterial (prokaryotic) histone like domain
B9J09_RS10745	SM00873	B3/4 domain
B9J09_RS10745	SM00874	tRNA synthetase B5 domain
B9J09_RS10745	SM00896	Ferredoxin-fold anticodon binding domain
B9J09_RS10770	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
B9J09_RS10795	SM00448	cheY-homologous receiver domain
B9J09_RS10795	SM00862	Transcriptional regulatory protein, C terminal
B9J09_RS10800	SM00387	Histidine kinase-like ATPases
B9J09_RS10800	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS10845	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS10845	SM00448	cheY-homologous receiver domain
B9J09_RS10850	SM00387	Histidine kinase-like ATPases
B9J09_RS10850	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS10860	SM00881	CoA binding domain
B9J09_RS10880	SM00434	DNA Topoisomerase IV
B9J09_RS10905	SM00292	breast cancer carboxy-terminal domain
B9J09_RS10905	SM00532	Ligase N family
B9J09_RS10915	SM00771	ZipA, C-terminal domain (FtsZ-binding)
B9J09_RS10920	SM00968	SMC proteins Flexible Hinge Domain
B9J09_RS10960	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS11000	SM00387	Histidine kinase-like ATPases
B9J09_RS11005	SM00448	cheY-homologous receiver domain
B9J09_RS11025	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS11065	SM00387	Histidine kinase-like ATPases
B9J09_RS11065	SM00388	His Kinase A (phosphoacceptor) domain
B9J09_RS11070	SM00448	cheY-homologous receiver domain
B9J09_RS11070	SM00862	Transcriptional regulatory protein, C terminal
B9J09_RS11085	SM01329	B9J09_RS11085
B9J09_RS11130	SM00363	S4 RNA-binding domain
B9J09_RS11135	SM00316	Ribosomal protein S1-like RNA-binding domain
B9J09_RS11140	SM00421	helix_turn_helix, Lux Regulon
B9J09_RS11140	SM00448	cheY-homologous receiver domain
B9J09_RS11145	SM00450	Rhodanese Homology Domain
B9J09_RS11150	SM00448	cheY-homologous receiver domain
B9J09_RS11175	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS11190	SM00357	Cold shock protein domain
B9J09_RS11195	SM00052	Putative diguanylate phosphodiesterase
B9J09_RS11195	SM00091	PAS domain
B9J09_RS11195	SM00267	diguanylate cyclase
B9J09_RS11215	SM00838	Elongation factor G C-terminus
B9J09_RS11215	SM00889	Elongation factor G, domain IV
B9J09_RS11230	SM00663	RNA polymerase I subunit A N-terminus
B9J09_RS11255	SM00649	Ribosomal protein L11/L12
B9J09_RS11260	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
B9J09_RS11260	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
B9J09_RS11310	SM01400	B9J09_RS11310
B9J09_RS11330	SM00028	Tetratricopeptide repeats
B9J09_RS11340	SM00937	B9J09_RS11340
B9J09_RS11350	SM00981	B9J09_RS11350
B9J09_RS11370	SM00644	B9J09_RS11370
B9J09_RS11420	SM01001	AIR carboxylase
B9J09_RS11485	SM00487	DEAD-like helicases superfamily
B9J09_RS11485	SM00490	helicase superfamily c-terminal domain
B9J09_RS11495	SM00986	Uracil DNA glycosylase superfamily
B9J09_RS11495	SM00987	UreE urease accessory protein, C-terminal domain 
B9J09_RS11500	SM00448	cheY-homologous receiver domain
B9J09_RS11510	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS11515	SM00487	DEAD-like helicases superfamily
B9J09_RS11515	SM00490	helicase superfamily c-terminal domain
B9J09_RS11525	SM00357	Cold shock protein domain
B9J09_RS11525	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS11525	SM00959	Rho termination factor, N-terminal domain
B9J09_RS11540	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
B9J09_RS11540	SM00245	tail specific protease
B9J09_RS11590	SM00812	Alpha-L-fucosidase
B9J09_RS11625	SM00487	DEAD-like helicases superfamily
B9J09_RS11645	SM00487	DEAD-like helicases superfamily
B9J09_RS11710	SM00487	DEAD-like helicases superfamily
B9J09_RS11925	SM00470	ParB-like nuclease domain
B9J09_RS11975	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
B9J09_RS11975	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
B9J09_RS11975	SM00493	B9J09_RS11975
B9J09_RS11985	SM00493	B9J09_RS11985
B9J09_RS11990	SM00857	Resolvase, N terminal domain
B9J09_RS12080	SM00382	ATPases associated with a variety of cellular activities
B9J09_RS12085	SM00530	Helix-turn-helix XRE-family like proteins 
