        ftsY    4335 ..    4359 +  -2.1  -3.67597   CTACTGCCAAAAACG          TTAGGGAGT GCTTAAG GCTCCCCAA          TTCTTACCTACGCCA  50 11
        mutY NONE
LPH39_RS00030    5832 ..    5850 +  -3.3  -3.92641   ACGTATACAGTGTTT             TTAATAA CCAGT TTATTAA             TTTATGCATCACATT  55 60
LPH39_RS00035    7041 ..    7053 +  -7.7  -4.14472   ACTCCTGGCCTTACA                GCACA TCC TGTGC                TTTTCCAGGTGTTAG  75 493
LPH39_RS00040 NONE
        ruvC    9886 ..    9901 +  -3.3  -2.93901   CAGCATACGGCTTTC              CGTAA AGAGCA TTACG               TATGATTGGTCGCCT  45 97
        ruvA NONE
LPH39_RS00055   12475 ..   12485 +  -3.2  -2.88579   AGCTACGGTTCGCCA                 CGTG GCA CATG                 TATCTCAAGAGTTAC  43 52
        ruvB   13572 ..   13582 +  -3.2  -4.15565   CGGCTCTTAATGATC                 CAGG AGA CTTG                 TTTTGAAGTACTACC  60 9
        ybgC NONE
        tolQ NONE
LPH39_RS00075 NONE
        tolA   16704 ..   16716 +  -2.7  -3.87869   GTTACATTCACGCTG                TTGTT GTT AACGA                TTTCTAAAACATTCA  54 401
        tolB   18166 ..   18176 +  -5.4  -2.83119   CATTGGCGAGGGAGC                 TACC ATA GGTA                 TCGTTATGAACAATT  49 72
         pal NONE
        ybgF NONE
        queE   20461 ..   20472 +  -5.8  -3.12668   CAAATAGGAGTGGGA                TCCC AGTA GGGA                 TATTGACCTTTAGGA  52 215
         nfi   22000 ..   22030 + -12.7  -2.62396   GTAAAGACGCTGGTA       CTCACACCTGCAA AATAA TTGCAGATGTGAG       TACTCTGCGAAGCTA  81 116
LPH39_RS00120   25039 ..   25060 +  -2.9  -3.27298   GATGACTTTGTCAAA           GCGCTCATA GGTC TCTGGGTGC            TTGATGATTGACAGC  46 404
LPH39_RS00135   29901 ..   29911 +    -4  -4.59773   TGCTGCAAGCAAAAA                 TACA TCC TGTA                 TTTTTCCAGCTGCCG  68 64
LPH39_RS00140   30753 ..   30783 + -11.2  -2.96274   CTGAATAACGTAAAA       GCCATGCTAACG CCCGAAT CGCTAGCATGGC       TGTAGTTATCGAAGA  74 165
LPH39_RS00145 NONE
LPH39_RS00215   38535 ..   38548 +  -4.5    -3.794   GAACGATATCGACCT               GCTGC CAAC GTAGC                TTTAATACATTGGCC  59 341
LPH39_RS00225 NONE
LPH39_RS00230   40135 ..   40146 +  -5.8  -2.70932   CCCCTTAAACACCCC                CTGG GCAT CCAG                 TCCTTCACCGCCAGA  48 363
        aspS   49727 ..   49740 +  -2.3   -3.4914   GCCATCGGACGCAAT               GCTGT CATC ACCGC                TTCATATTGTGTTTT  47 96
LPH39_RS00320   58019 ..   58044 +  -6.1  -2.87881   CAGTACATGGCCCTT         TGATCCCTTGC TGAA GGGAGGGGTCA          TGTGTAACGACCTTG  52 69
         xth   59533 ..   59548 +  -6.1  -2.73701   AGGCGAATGGGATCT              GCGTG ACCGAC CACGC               CTTGATTTCATGCAA  51 311
LPH39_RS00330   60332 ..   60355 +  -3.7  -3.60048   TTAATAGCCTGCTGC          TGGGTGCCC GATATA GGGCTCTCG           ATTTTTTACCGGGGC  50 171
        rsmG   61018 ..   61052 +  -4.9  -3.16071   AACGCGGCACTTGGT    GGTCGTGCGG-AAGGG ATAG CGCTTACCGCACATCC     TCTGTTGATGTCGCC  50 7
LPH39_RS00365   68142 ..   68165 + -13.2  -3.90291   TCCGTAGTAAAACGA          TTGGGACGGC TGAG GTCGTCCCAA           TTTCATTAGCACGCT  95 57
         dcp   71687 ..   71714 + -12.1   -4.1851   CCTGTGTGTTCAGCA        GAACGAGGTGG CATCGT CCATCTCGTTC         TTATTTCTAATTTGC  95 46
        folC NONE
LPH39_RS00385   75519 ..   75535 +  -3.7  -3.35465   GCATTATCGGTATGG              TCAGG TCACATC CCTGA              TTACTGTCTCTCCCT  48 9
LPH39_RS00390   76132 ..   76142 +  -3.2  -2.63596   GATTGCCAGTATCCG                 GTGA TAA TCGC                 TGATATCCAGTCCAA  42 12
        purF   78198 ..   78212 +  -4.4  -2.78935   GAATCATAGCTAGTC               TAAAAA TTC TTTTTA               TCTAGTAGGCAGTCT  45 478
        gshB NONE
LPH39_RS00435   90963 ..   90977 +  -3.6  -4.91852   TCAAACAGATTCGAT               TCTTTT CAA GAAAGA               TTTATTTTTAATAGC  73 289
LPH39_RS00440   92019 ..   92030 +  -4.4    -3.727   CGGTAATGGAATAAG                TGCT GATA AGCA                 TTTCGGTATCCTGCA  55 152
LPH39_RS00475  100320 ..  100353 +  -2.3  -4.14739   ATCGCACCTGAAATG     AGCACGCT-GTTGACC GGG GGTTTCCCAGCGTGCG     TTTTCGAGTCACTGC  57 482
LPH39_RS00510  104747 ..  104771 +  -3.5  -3.17392   CACCTGCATCACTAT          CGATGTCTCTC TAT GGGAAACATCA          TTCACTTGGAGAATG  46 177
        purH  107391 ..  107419 +  -5.4   -3.4285   GTCTTCACCGGGGTG       CGCCATTTCCG GCACTGAA CGGAAATG-CG        TTATGGCTTGGATGG  54 8
        purD  110040 ..  110061 + -11.5  -4.72846   GTTTGTTGTCGGGGT           CACCCGCTC AGGC GAGCGGGCG            TTTTTCACTCTGTCC 100 470
LPH39_RS00535  110995 ..  111036 +  -3.7  -3.08679   CCAATCTTCAAAAGG ATTCATCCAGGATGAAAGCG CTG CGCTTGC-TGCTGGAGGAAA TATTGGCTCGCCGCC  45 11
LPH39_RS00540 NONE
        yccS  114092 ..  114108 +  -4.3  -3.98159   AACCGTCGGTGCTCC              ACGGTCA GAC TGGCCGG              TTTACTATTGTCATG  60 308
        folE  122800 ..  122814 +    -7  -2.75992   CTTATAAATGAACCC               GCCCGC ATC GCCGGC               TACTGTTCCCTCCGC  57 54
LPH39_RS00575  124357 ..  124374 +  -2.7  -3.33696   ACCACCACAGATTCC             TCCA-CAC CGC GTGATGGG             TTACTTGCACACGCC  47 362
LPH39_RS00595 NONE
LPH39_RS00600 NONE
LPH39_RS00605 NONE
LPH39_RS00610  132005 ..  132021 +  -2.9  -3.07895   TGGAGCCGGAGTGAA              CGCATGT TGG ACGTGCA              TATATTGACCCTGCC  43 27
LPH39_RS00615  132524 ..  132538 +  -2.1  -2.56596   CGCGAACTGATACAG              GCC-TG GGGA CATGGC               TAACTTACTGGCCGA  39 8
LPH39_RS00620 NONE
LPH39_RS00625  133986 ..  134003 +  -4.8  -3.86822   CCGCTCAACCCGCGG             GGCGTT AGGAGC AGCGCC              TTTATCGGCACCTTA  59 141
LPH39_RS00630 NONE
LPH39_RS00635 NONE
LPH39_RS00640 NONE
LPH39_RS00645  136010 ..  136026 +  -2.1   -4.4017   TCTCATCCCTTAGCG              AGCCATG TTC CAAGGCA              TTTTCTGGCACTTCA  61 398
LPH39_RS00650  136943 ..  136958 +  -8.2  -3.14564   CACCTTGATTGATGA              GGGCGC AAGC GTGCCC               TTCATCGCACGCTAC  64 245
LPH39_RS00660  140583 ..  140593 +  -2.6  -3.70553   TTAGTGACCTTTTAC                 TTTT TTA AAAA                 TTATCTGTTACGTTA  51 335
LPH39_RS00675  143467 ..  143480 +  -2.4   -5.0538   ATAATTAAACTTGAC               TCAG CGGCAT CTGA                TTTTTTCCACTGAGA  75 498
LPH39_RS00685  145674 ..  145685 +  -5.8  -3.05596   TGGCCGCCATGCGGC                TGGG TTAT CCCA                 TTGACTAAAAACCTC  53 6
LPH39_RS00690 NONE
         ppa  148622 ..  148633 +  -5.8  -2.72511   CATACTCACCAGCCA                GGCT CGAA AGCC                 CTTTCAAGGGATGCA  51 50
LPH39_RS00710  151930 ..  151942 +  -4.7  -3.60865   GAGCCATCTGCCGCG                CTGCG GTA CGCTG                TTCTGCTTTGCGCTG  55 63
        leuS  154685 ..  154697 +  -5.5  -2.92463   TCCCATATCGGCGTC                TCCTC CAA GAGGG                TCTCTCAATGATCAA  51 95
        lptE NONE
        holA NONE
        nadD NONE
        rsfS  157965 ..  157975 +  -6.8  -4.56597   GCCGCTACACCCGTT                 GCGT GGC ACGC                 TTTTTGAAAACAGCC  77 490
        mltB NONE
LPH39_RS00750  161062 ..  161100 +  -9.1  -2.99471   CCGTCCACAAATCGT  TG-GCCTATGATCGATCGA TAC TGGATCGA-CATAGGCGCA  TGTCTATCCAGCTCC  66 16
LPH39_RS00765 NONE
LPH39_RS00895 NONE
LPH39_RS00900  191233 ..  191250 +  -8.3  -3.74762   CACTTTGACGTGGTC             GGCGTCC ATCT GGCCGCC              TTCTTGGTGGATGTT  71 466
LPH39_RS00995  211986 ..  212003 +  -3.3  -2.76171   GCCCAATTGGCCCGG             CGCTATG GTGA CAAGGCG              TGATGTTGCCTGAAT  43 15
LPH39_RS01000 NONE
LPH39_RS11945  212694 ..  212718 +  -2.1  -3.08032   CTGTGATATAGGCTT          TTTTTGATCTC ACG GAGAACAGGAG          TGATTTTGAAAAGCC  42 57
LPH39_RS01005  214059 ..  214077 +  -3.1  -3.40611   ATCTTGTTTATCAGA             TCTATGG GTTAG CCTTAGA             TATTCTTCAAGTGGC  47 120
        prmA NONE
LPH39_RS01015 NONE
LPH39_RS01020  216551 ..  216565 +  -3.5  -4.99947   GGTTATTTTGCAAGG               CGCTT GCAGA AGGCG               TTTTGTTTGATTCCC  73 51
        yeiP  217912 ..  217950 +  -2.2  -5.14563   GACCTCACGCATCAA   TGCAATCTCAGCCGCGCT GCG AGTGCTGCCGAGGTAGGG   TTTTTTGATCAGGCC  75 240
        serA  220758 ..  220771 +  -3.1  -3.17075   TCGCGAAGCTTTGCA               T-CGGC AAC GCCGCA               TTCGATTGCAGCACC  45 131
LPH39_RS01040  222603 ..  222625 + -16.3  -3.87583   ACGATCACACCTCAG           GAGGCCGGC CAAGC GCCGGCCTC           TTTACATTTCACTTT 100 41
LPH39_RS01045 NONE
LPH39_RS01050  224775 ..  224787 +  -2.7  -2.75022   TTACGTGGACATCTT                TGAGT CCC ACTTA                CTTGTCTATGGAACC  42 23
LPH39_RS01055 NONE
        mtnC  226071 ..  226086 +  -4.6  -2.73364   AAGCTTCGCACAACT              GCCCTT CTAA ACGGGC               TCATTGCGGTCACAG  46 16
LPH39_RS01075  228322 ..  228334 +  -7.7  -2.84878   ATCCATCGGATACTT                GGTTC ACT GAACC                CTTTGCATTGACGGG  59 143
LPH39_RS01080  229342 ..  229360 +    -3  -3.21595   CAGTGTTGCCGGACT             CCCTCAGC GCC GCTCAGCG             TTAATGATCCGCATT  45 3
LPH39_RS01200  262368 ..  262397 + -12.8  -2.74263   GTACCCATTGATACA       AGC-GGCGGCGGG ACAAC CCCGCCGCCTGCC       ATTTAGCACTCCGCT  81 54
        rpoE NONE
LPH39_RS01225  265551 ..  265568 +  -4.7  -3.70478   TTGTATTTCTACTCA             CCGGTGT AGTT GCCCCGG              TTTGGATCCCTTTGT  57 77
LPH39_RS01230 NONE
        lepA NONE
        lepB  270049 ..  270062 +  -4.5  -2.64099   TTGAATGAAAGTTGC               TCCCT ACCA GGGGA                ATTCTAGTGAGGCAC  46 37
LPH39_RS01245  270409 ..  270420 +  -4.4  -2.63596   CGATACCGAGCAGGA                CTTG ACAT CAAG                 TGCTATCAAGTAAGA  44 1
         rnc NONE
         era  272197 ..  272207 +  -2.4  -4.29304   ACGCTCATAACCGCT                 TGGG TAT CCCC                 TTTCTCTTATGCTCA  57 226
        recO  273289 ..  273299 +  -5.4  -3.10796   AACCAGCCCCACCAG                 CAAC CAC GTTG                 TCTTCGATCGTGACA  50 352
LPH39_RS01270  276241 ..  276259 +  -5.2  -3.29096   ATTTCTGCATCGACA             TGCTTCGA TGA TCGCAGCG             TTGCTCATTGCTCCA  54 230
         acs  281125 ..  281147 +    -4  -3.18264   ACTGACAAATCCACG           GGACGGGATC CAC GATCATGCCC           TTAATCCCTGACAGG  48 36
LPH39_RS01290  282872 ..  282887 +  -2.6   -4.2679   GACTGAAGCTTTGTT              TTAGGA GGTC TCTTAA               TTTTAATACCGCTTG  59 194
LPH39_RS01305  286551 ..  286567 +  -7.3  -4.37211   GAAATTAACGCGTTC              CATTGAG ATA CTCGATG              TTTATTATGCATTTA  76 258
LPH39_RS01310  289758 ..  289787 +  -5.7  -2.72049   CCCAACGAGGCCGTG       CATGACATCGCACG CCT CGCGCAA-GTCATG       TCATTGACCGATGTA  51 485
        glpD  297613 ..  297629 +  -2.9  -3.61178   ATCGATCACACCACC              CACCATA CAC TGAGGTG              TTTCAGCTACATGAA  49 59
LPH39_RS01330 NONE
        glpK  300518 ..  300531 +  -3.7  -2.83519   AATATGCAGGGCCAT               GGCGC TACA GCACC                TCGTCTATTTCTCAG  43 495
        metE NONE
LPH39_RS01355  306601 ..  306615 +  -5.7  -2.96695   CGTCGCGCTGATCGT               GGTTG ATCTG CAACC               TGATTTCATACCCGG  53 76
LPH39_RS01410  319711 ..  319721 +  -5.4  -4.45168   CGCGATGACATTGCT                 CACA GGT TGTG                 TTTGTATTTTCACGC  69 209
LPH39_RS01430  326115 ..  326135 +  -2.4   -2.9632   TCGGTAGCAATAGTA            ACCATGCC ATATG GGCTTGGG            CTTCTTTCACGCTTT  41 366
LPH39_RS01450  331846 ..  331862 +  -2.9  -3.85698   TCTGGGCTGGTCGGA              GCGTGAT TTC GTCACGA              TTTCTCAGCACCAGA  54 109
LPH39_RS01470  336474 ..  336488 +  -2.8  -5.02476   CTTGGTGATACCAGC               TTGGAA TAT TTCCAC               TTTTTTAAAGGCTCT  74 143
LPH39_RS01475 NONE
LPH39_RS01520 NONE
LPH39_RS01525 NONE
LPH39_RS01530  352056 ..  352066 +    -4  -2.57092   ATGTCTATTCTCTTC                 TCAA TCC TTGA                 TGCATTAATGCCGTT  44 161
LPH39_RS01535  353796 ..  353811 +  -3.2   -3.4072   CTTGTAAGCACGCTT              GGCG ATCACCGC CGCC               TTCTCATAGCCAATG  48 372
        purB  357364 ..  357388 +  -2.9  -2.87211   TCTTCCTACGATGGA          GATGCTC AACAGCAGAAC GAGCATC          TCTGTACAACAACAT  42 486
LPH39_RS01550  358977 ..  358992 +  -2.6  -2.92463   AGGTCAAACGTCACT              GCA-ATG GAT CATGTGC              TATATGCGTCATCAG  43 283
LPH39_RS01555 NONE
        sucB  364365 ..  364381 +  -2.9  -3.28712   AGTTGGAAACACCCG              GACGGAT GCT ATTCGAC              TTATAAGGAAGGCAC  47 3
LPH39_RS01565 NONE
        lpdA  366282 ..  366312 +  -9.8  -5.71295   AGTATCTCCTCATCA       GGCATCGCTC TACAGACTCCC GAGCGATGCC       TTTTTGTTTTTATCT 100 50
LPH39_RS01580  371354 ..  371365 +  -2.2  -3.64259   GAATACAGGTTCATA                TTGC TACT GCAG                 TTCTTCCAAATCATT  50 404
        speD  375388 ..  375414 +  -2.3  -2.81727   CCATTGCCACTGGAA        TCGGTG-ACG GCAACAAG CGTGCACCGG         CTTGTTCAGCTTGTT  39 338
        rplM NONE
        rpsI  377046 ..  377070 + -11.5  -4.08692   GTGAAGAATAAAAGC          GGCACCTCA CCTTATT TGAGGTGCC          TTTTGAGGCGACTTA  91 96
        prmC  415316 ..  415329 +  -4.5  -3.13403   GTGACCGTATCACCG               TGGGG CGCT CTCCA                TATTCCTAAGACGGC  50 3
LPH39_RS01740 NONE
         pip NONE
LPH39_RS01775 NONE
         gmk NONE
        rpoZ  424890 ..  424914 +  -9.4   -3.4878   CTAGTAATGCATTAC         GGGGAGTATTG TCGT CAA-ACTCCCC          TTAGTTGTCGTGTAA  71 202
LPH39_RS01800  431029 ..  431054 +  -3.9  -3.34895   ATCCCAGCGACACAT         CGCGACGATTT CACC AGAGCATCGCG          TTCCTTCCCCCTCCA  50 89
        cysI NONE
LPH39_RS01810  433988 ..  433998 +  -4.6  -3.57144   ATGCTTGGTATTCCA                 CCCG TTA TGGG                 TTTCCCGATAGCCGG  55 490
LPH39_RS01825 NONE
LPH39_RS01830  438150 ..  438163 +  -6.7  -3.61178   CAGACATTCCCAAGC               CCTGA TCAA TCAGG                TTTACCATAGATAGG  61 21
LPH39_RS01835  439231 ..  439249 +  -4.5  -3.14211   ATGGAGTGCATCGGC             GATGGCA AAGCA TGCCAAC             TTCATAGCCGGGGAT  50 168
LPH39_RS01845  441990 ..  442005 +    -4  -3.07935   TTGAAACTGAAAAAA              TCTCAA AAAA TTGAGG               TTCAATCGATACGAT  47 390
LPH39_RS01860  446358 ..  446375 +  -6.3  -4.09685   GTCGAGCACGAACAA             GTGAGGA TAAA TCTTCAC              TTTTGGGAAATGAGC  66 443
LPH39_RS01880 NONE
LPH39_RS01895  456544 ..  456562 +  -8.2  -3.62046   TTCGCAAAACGAAAC             TTGGTGCA TCC TGCACTAA             TTATTAGAAACATCA  71 213
LPH39_RS01930 NONE
        sufB NONE
        sufC  466663 ..  466677 +  -2.8  -3.05463   CACCGACGGTCCCAG               CACC CCGGGAA GGTG               TTCGATGAGCACCCT  43 3
        sufD NONE
LPH39_RS01950 NONE
LPH39_RS01955 NONE
LPH39_RS01960 NONE
LPH39_RS01965  472950 ..  472960 +  -6.8   -2.7127   CACACGTCCCCGGCC                 CTGC ACC GCAG                 CTTGTGCTTCAATCA  50 278
LPH39_RS01990  477016 ..  477039 +  -7.5  -3.57263   CAGCCGCATTACGGA          CCA-CACCGT CAATC ACGGTGATGG          TTTCACCATAGAGAT  63 289
LPH39_RS02020 NONE
        trxB  499793 ..  499805 +  -3.4  -3.61398   CTTCTACAATAACGG                CATC CAAAC GATG                TTGTTCACCGCCGGA  50 436
LPH39_RS02095  500960 ..  500977 +  -4.1   -2.8937   CCGTTCCGTAGAGAC             TGAACGA TCAC TCGTGCA              TCTATACCCCTATCT  45 23
         aat  501777 ..  501800 +  -8.8  -2.52464   CGTAGGATATTTGCC          CTTGGCGGCCC GCC GGGCCGC-ATG          TGGATTGCACACAGG  60 98
        infA NONE
LPH39_RS02120 NONE
        mnmA  506863 ..  506879 +  -4.5  -2.79915   AGCTGGCGTGTAATC              TTTTCAA AAC TTGAGAA              TGTGCTGCAATGAAT  47 12
        hflD  507684 ..  507697 +  -3.8  -3.91911   TACTCAAACCACCTA               GGGT AGGATC ACCC                TTTGCTTACAATACG  57 206
LPH39_RS02135  508831 ..  508852 +  -4.3  -3.00946   ACCCGAAAGCCGATT           TGGCATCAG CAAG CTGACGCCC            TCGTTTATGCGAAAC  47 514
        yihA  512868 ..  512879 +    -3  -3.65902   GCGCACAAGCTCATC                TCAA CCCA TTGA                 TTTACATAAAATAAA  51 45
LPH39_RS02160  514601 ..  514625 +  -4.2  -3.29144   CCCTTCTCAATCAAT          CACAGCCGAA CCATT TTCGGATGCG          TTCTACACAACATGC  50 213
LPH39_RS02175 NONE
        xerD  518379 ..  518389 +    -4  -4.77698   GATGCAGCATCCAGC                 TTGT GAG ACAA                 TTTCTTTTAATGTTC  71 116
LPH39_RS02185  519360 ..  519381 +  -3.7  -3.68341   ACGCCACGAATGCGT           GCGGGTACAA TGC TTG-GCTCGC           TTCTTCAATACGGTT  53 177
        purL  523542 ..  523552 +  -3.2  -3.09004   GCAGATGCTCACCAC                 CTGT GCA GCAG                 TCATTTTCGCAATGC  45 188
LPH39_RS02210 NONE
LPH39_RS02215  527758 ..  527792 +  -2.8  -3.31792   ACAAAGTCGACGCCC     TACTGCGAAAATTCGT GCG ATGAGTTGGCGCAGCA     TTCTCAACATCATGC  47 3
        lptC  528330 ..  528342 +  -9.1  -3.30605   ACACCCGTTATGAAC                CGAGC GCC GCTCG                TTAACTTGTTCCTGT  69 9
        lptA NONE
        lptB  529580 ..  529596 +  -2.9  -3.56558   ACTTTTCACCTCTGA              TCGGCAT GCA ACGCTGA              TTATAGTTAGTATTA  49 26
LPH39_RS02235  530991 ..  531006 +  -6.8  -2.94416   TCTCACGAACGCGTC              CGGGTC CTCT GATCCG               TCTATCATCGGCGTC  55 14
        raiA NONE
        hprK NONE
        rapZ  533818 ..  533837 +  -2.8  -3.02144   TGCCCACACAACATT            GCT-CGCCA AGA TGGCTCAGC            TATTACCCAAAGTCC  43 296
LPH39_RS02255 NONE
LPH39_RS02260 NONE
        ptsP  536965 ..  536984 +  -2.8  -3.01924   GAATAATGTCAGTAC            TGATGCTG GTTT CGTCATCA             TATTGACAGAGCATA  43 35
        mgtE  538603 ..  538614 +  -4.4  -2.70932   GAACACTGAAAGATC                GTTC TCAC GAAC                 TCATTCAGAAAAAAA  44 201
        gloA  539590 ..  539603 +  -5.2    -3.737   CTCGCTGAATTCCCA               GGGC ACCTCA GCCC                TTTGCTAACCCCTTG  59 156
LPH39_RS02290  544229 ..  544239 +  -3.2  -3.33525   ATGCCATTGCATTGA                 TGCG TGC TGCA                 TATTATGTCACTCAC  48 240
LPH39_RS02300  546039 ..  546069 +  -5.2  -3.53811   TTCCATAATTTGTAC       CGGTCACGCTGGCC TTC GGCCTGACTGACAG       TTTGAGCACAATGCA  56 237
LPH39_RS02305  546430 ..  546440 +  -2.4  -3.55444   CCCAATGCACCCTAT                 CCCG CAT CGGA                 TTTCAGACATGAGGA  47 92
LPH39_RS02310  547802 ..  547812 +  -5.4  -3.85698   CCATGGATCGCGACT                 CTGT CAC ACAG                 TTTCTGAGCCACGAC  61 8
LPH39_RS02315 NONE
LPH39_RS02320  549153 ..  549163 +  -2.4  -3.07935   CTGACCGTCCTGCTC                 GCCC TAA GCGC                 TTGCGTGCATCAGAT  42 61
LPH39_RS02325  550748 ..  550759 +  -5.8  -4.06678   AACCTATGCACTTGG                CGAC TATC GTCG                 TTTATCTGGATGGAT  66 316
LPH39_RS02335  553090 ..  553102 +  -4.8  -2.82516   CTCATCCTGAACAAA                GTGC AGGAA GCAC                TCTCATCCTGCAACA  47 232
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD  557715 ..  557735 + -10.4  -5.55698   TACCACATACTAAAA           GGCCGCAGG TGAT CC-GCGGCC            TTTTTTTCGGTTGTC 100 49
LPH39_RS02365  563650 ..  563674 +   -10  -4.15222   CACCTTAGCCGCCCC          TCAGCGCAGC CAACC GCTGCGCTAA          TTTCTTAGCCGAAAT  83 33
LPH39_RS02375  568768 ..  568796 +  -9.5  -2.67708   CCATCCACTTACTCA        GAGTGTGCAGCAC CCA GCGCCGTACACTC        TGCTGTGGTCACTTT  66 104
        recQ  570781 ..  570794 +  -3.8  -3.28712   AGATACACTCCTCGA               CAGG AATCGC CCTG                TTCTACCAGAACCCG  50 116
LPH39_RS02385  571268 ..  571284 +  -2.1  -2.90901   CGGCCTCCACAGACT              GCATCCA GTG TGGTAGC              TGTGCTTGCCGGTAT  40 10
LPH39_RS02395  572206 ..  572224 + -10.2  -3.05963   AATTGATGGCATCTG             TGCCTGGG CAG CCCTGGCA             TGTTCGCGTGCGCGT  68 262
        radA  574876 ..  574898 +  -2.6   -3.3353   TCACCCAGAATAACC           CTAGCGATAG TGA CGCTCGTTAG           TATATTTCTCACAGG  47 353
LPH39_RS02460  586539 ..  586550 +  -5.8  -3.61715   TCCGCCACGGTCACC                CGGT CGTC ACCG                 TTATTGAAGAGGATG  58 350
LPH39_RS02540  600773 ..  600802 +  -2.1  -2.95102   TCTCATGTCGCTGAA       TCATTCAAAGCACG CGA CGCGCCT-GGATGA       ATTTATGACTCCAGT  42 491
LPH39_RS02555 NONE
LPH39_RS02560  604221 ..  604234 +  -6.7  -2.79302   GCGTTCCATGCAGAT               GTCTG TAAG CAGAC                TATCATCCAGGTCAT  54 102
LPH39_RS02570  606442 ..  606478 +  -8.7  -2.72799   CAATAAGCTGTCGCG    GATGGTCTCTGGCATAG GCT CAATGCCAGACGCGATC    TAGTCTGTATCCGCA  61 199
LPH39_RS02575  607564 ..  607579 +  -7.6  -2.55213   CGTGATCACCGTGGA              GACATC CTTG GATGTC               TAGATTGCGTCGCTA  57 382
LPH39_RS02600  611047 ..  611082 + -11.1  -2.91264   CGCCTCTTACACGCA    TGACGACGCCGGTTC CATGCA GAACCGACGCCGTCG     TATGTAGCTCCAAGC  74 45
LPH39_RS02605  612291 ..  612301 +  -4.6  -3.63515   TCACTTCGGTGAGGT                 GCGG GAA TCGC                 TTATTGCCAATCCCC  57 334
LPH39_RS02610 NONE
LPH39_RS02615  614198 ..  614215 +  -4.1  -3.61922   TCAGTCAAAAACAAA             CCCG-CCA CGG TGGATGGG             TTTGCGGTCGGTGTT  55 298
        thiD  620248 ..  620262 + -11.4  -4.08216   CCAAGCGAAGCAACG               CAGCCG TTT CGGCTG               TTTTACAGAACATCA  91 156
LPH39_RS02665 NONE
        groL  628333 ..  628350 + -10.5  -6.02919   GTATTTATCGAAAAA             GCCCTGC TGAC GCGGGGC              TTTTTTTCTTTATGC 100 58
LPH39_RS02740 NONE
LPH39_RS02745 NONE
LPH39_RS02750 NONE
LPH39_RS02755 NONE
LPH39_RS02760 NONE
LPH39_RS02765 NONE
LPH39_RS02770 NONE
LPH39_RS02780 NONE
LPH39_RS02785 NONE
LPH39_RS02790 NONE
        purM  661442 ..  661456 +  -2.8  -4.17355   TCCACCACATCAGCT               GCCA CTGTGCT TGGC               TATTTTTTCCCCTTC  59 60
        purN NONE
LPH39_RS02820 NONE
LPH39_RS02825  664026 ..  664037 +  -2.2  -2.94232   CACGGATCAGCTTTA                G-GGC CAC GCCAC                ATTGTTTGCAGCAGC  42 281
LPH39_RS02835  668451 ..  668467 +  -2.2  -3.30124   CAAGGACCTGATGCA              CTGTAC ATTCC GCACAG              TTCTCAGCGATGCAC  45 480
        fabA  669636 ..  669656 +  -6.1  -2.78018   TCTGTGCATCGCCCA            TCAGCAACA CAG TGATGCTGG            TCATTGCTAGACAAT  52 151
        ttcA NONE
        rdgC NONE
LPH39_RS02855  673845 ..  673859 +  -5.6  -3.30507   ACCCAGCCCGCCACA               CCGAGG CAA CCTGGG               TCTATTTCGATTCCT  54 132
LPH39_RS02865 NONE
LPH39_RS02870  676378 ..  676403 +  -2.6  -3.15638   CAGGATCGCGGTAAA         CACTG-AAACG CAGGC CGTTTGCCGTG         TTCGATATCGGTTTT  45 20
        tatB NONE
        tatC  678057 ..  678077 +  -6.8  -3.85698   TGGATGTCATCCGGA            CCAAGCTG CACAC CAGCCTGG            TTTATCCCAAACAAC  63 522
         azu  681262 ..  681278 +  -2.2  -2.77899   GCAAGGAGAACAAGG              TGATGG AAATA CCATCC              TCATTGATAACGGCA  40 68
        rsmI  686870 ..  686896 +  -5.8  -2.52464   GATGCATGACTTCTT         TCCATTGCCG ATCGCTG CGGCGCTGGA         TCGATTGGCACCAGG  50 451
LPH39_RS02920  690660 ..  690683 +   -16  -3.34398   CACCTTGGCATACAC          CAGGGGCCGG CTTG CCGGCCCTTG           TCTTTGGGGAGGCAC 100 50
        metG  692970 ..  692997 +  -5.5  -3.01791   CAGCTCTGCCCCTCT        CGGATGTCTGC TTCCCC GCATCCATCCG         TGTTCGACACCGCAT  51 110
        rnfB NONE
LPH39_RS02940  695103 ..  695117 +   -10  -3.33696   GAGACCAGCCGCCTT               GCGCAA CCG TTGCGC               TTCATTCCGAACCCC  73 142
LPH39_RS02960  698505 ..  698519 +  -7.2  -3.14132   CTCAGAATACTAACG               TTGCTT ATC AAGCAA               TTGGTGACGAACCGC  60 100
LPH39_RS03040  720100 ..  720116 +  -4.4  -3.60048   GAAACTCCCAGTCCA              CGTTGT AGCCC GCAACG              CTTTTTTAAAGCCGC  52 419
        moeB  721736 ..  721758 +  -5.5  -3.37612   CTCCCGAGGCATACA           TGGGGCTGG CACAA TCGGCCTCA           TTGCTTGCGCTTCAC  54 226
         gap  732933 ..  732945 +  -5.5  -3.78312   CTGGCTATATACCAT                GTGCT TGC AGCGC                TTTCCTGGGTAGTTT  59 276
LPH39_RS03110 NONE
        pilH  739490 ..  739502 +  -3.3  -2.78384   TAATACTCAAATCCA                CCCTA AAG TTGGG                TCTGATAAGCGGCAG  43 470
        pssA NONE
LPH39_RS03145 NONE
        rimI  746828 ..  746841 +  -2.3  -3.28791   CCATGCAAATATCCA               GCCTG CGCA CATGC                TTCTACAACCAACGT  45 366
        rpsU  755313 ..  755335 +    -7  -5.80817   GGCGTTCCGCGATAG          CCGG-CACG CGCAAT CGTGACCGG           TTTTTTTGTGTTGCC 100 110
LPH39_RS03190  755846 ..  755859 +  -3.8  -2.91264   ACAAATCTCTGCACT               GGTG AAAAAA CACC                TGTCTCACTAAGCCC  45 1
LPH39_RS03195  757111 ..  757121 +  -2.4  -3.14132   GATGCCAACAAACAT                 CACG GAC CGCG                 TTCCTGAACCAAACA  43 82
        dnaG NONE
LPH39_RS03230 NONE
LPH39_RS03235 NONE
        mlaD NONE
LPH39_RS03245 NONE
LPH39_RS03250 NONE
LPH39_RS03255  775480 ..  775492 +  -3.4  -4.63218   AGGATCGTGACACTG                CACA ACGCA TGTG                TTTTCTTACCAGCCA  66 370
LPH39_RS03275  781408 ..  781428 +  -8.3  -2.81072   GACACTTGATGACAC            CACATGCGT CAG ATGCGTGTG            CTTCTCTTCACTCAC  62 418
LPH39_RS03280 NONE
LPH39_RS03285  783330 ..  783340 +  -2.4  -4.07568   GGAAAACGTGGCAAA                 CAGG CCG CCCG                 TTTTGACCACGCCCA  56 186
LPH39_RS03295  785542 ..  785558 +  -7.2  -2.73771   ACAACGCTGATCTCA              GCTCCG GTCAA CGGGGC              GTTTCAGCCGTATGG  56 31
LPH39_RS03325  794929 ..  794943 +  -4.2  -3.17051   TCATCGTTACTATTC               TCCTGC TTG GCACGA               TATTGCTCGTCACCC  48 173
LPH39_RS03330 NONE
LPH39_RS03335  797174 ..  797196 +  -3.4  -3.40498   TGACAATATCCAATT           GCATTTCAAT CCA ATCGATATGC           TCTTCTTCAGAATTG  48 89
LPH39_RS03355  798777 ..  798787 +  -3.2  -2.66869   GAAATTGCAAGTGCA                 GGGT AAT ACTC                 TCGGTTCTTGCGTCT  42 51
LPH39_RS03360 NONE
LPH39_RS03400  814136 ..  814147 +  -2.2  -3.16881   TTTCGCGACCTTCCG                CTCT ACCA GGAG                 TTAATAAAATGGGTA  43 141
LPH39_RS03405  814703 ..  814718 +  -3.3  -4.03234   ATCCTCAGAATTAAT              GGAAT GGCCGA ATTCC               TTTCTCTACCAAGCC  58 390
LPH39_RS03415 NONE
        thiE  819783 ..  819808 +  -6.1  -4.07568   TATTCCACCCACCAC         CGGATGTGCCGA TAG TCGGCGAA-CCG         TTTTGGGGACGCACC  66 510
LPH39_RS03440  822296 ..  822312 +  -3.7  -4.41353   GAATGCTTGTCTTGA              GGATG GCGTTTA CATCC              TTTTGATCTATGTGG  63 302
LPH39_RS03445  825109 ..  825131 + -14.9    -5.186   CCTGTGACATCATGG           GTGCCCGGT ATGTG ACCGGGCAC           TTTTTCTGTGTTTTG 100 241
LPH39_RS03450  827102 ..  827124 + -14.9  -5.59962   CCTGTTACATCATGA           GTGCCCGGT ACGTG ACCGGGCAC           TTTTTCTTTATTTTG 100 249
LPH39_RS03465  829749 ..  829760 +  -4.4  -3.68619   GTGGATAGTGGGTTG                CAAG GTAC CTTG                 TTTGACTCAGTTGGG  55 248
LPH39_RS03470  831508 ..  831528 +  -6.8  -3.17723   TGGTACGTGTATCTT            TGCGGGAC TCTCC GTCACGCA            TTAGCTTAAGAGTGC  57 86
LPH39_RS03475  832763 ..  832805 + -16.5  -4.42806   ATCAGAATTCGACTT CTCCTGGATTCGCTTGCTGT TGTC AC-GTGAGCGAATCCAGGGG TTTCTTTAAAACTGA 100 91
LPH39_RS03485  837757 ..  837783 +  -2.2   -4.3739   GTGATGGTGCTAGCT         GTGATCAAAATG CTG CGTGTTGTTCGC         TTTTATCCACGGGTG  61 205
        pilM NONE
LPH39_RS03500 NONE
LPH39_RS03505 NONE
LPH39_RS03510  844782 ..  844792 +  -5.4   -3.2115   CGACCAGCCGCACTT                 TCGT TCG ACGA                 TTAATGACTGATTTA  52 11
LPH39_RS03515  846712 ..  846730 +  -5.2  -3.29324   ACTGCCACTTGCTTT             CTGTCGTC TCT GACGGCAA             TTCGGTTTCAGTCCA  54 49
LPH39_RS03520 NONE
LPH39_RS03525  850762 ..  850782 +  -9.1  -2.71712   AATCGGTCATGGAAC            GCATAGAAG CAT CTTTTATGC            ATTTCAAAAGAAGCA  63 505
LPH39_RS03550  859906 ..  859917 +  -4.4  -3.02649   CAGGCAGGTCGTCAA                CACA ATCC TGTG                 TATGTGTGATGCCCT  47 370
LPH39_RS03555  862435 ..  862456 +  -4.3  -3.94846   AACCTGACAGCAAAA           CTCGTTAGG GTTA CCTATCGTG            TTTACATTTTCATGC  57 317
LPH39_RS03560  866715 ..  866740 + -15.5  -3.07236   AGTGTGGCTCCATAG         CGAAGCCTGGC TAAT GCCAGGCTTTG          TCTTGACATGACTTT 100 51
LPH39_RS03565  868761 ..  868791 +    -4  -2.69964   GACCAGTCACTGCGG       TAACAACCAGAAAC AAA GTTTACGGTTGTCA       TGATGTGATTACAGC  44 97
        rlmH  873418 ..  873431 +  -5.3  -3.13899   ACTGTAGCAATCTAA               CACTT ATTA AAGTG                TCTTAATAGACGATT  52 446
LPH39_RS03595  877836 ..  877850 +  -2.8  -4.08945   AACACACCAAACCAT               TCGATT ACA AAGCGA               TTTTAAAAGACTCAT  56 159
LPH39_RS03610 NONE
LPH39_RS03615 NONE
LPH39_RS03620  882929 ..  882944 +  -2.5  -3.41073   ACATGTAAAGTGATG              CGGCA ACCCAG TGTCG               TCTTTCGCTGCAGTG  45 378
LPH39_RS03630  884959 ..  884975 +  -6.5  -3.15249   AATGCCGTACCTCAT              GCGTGGT GTC ACCGTGC              TTGATACAGGGTGTG  57 420
        ettA  896903 ..  896924 +  -7.2  -5.02074   CAGCCGCGGCCCGCC           CAGTGCGG GCCAGG CCGCACAG            TTTTTTCAGCACTGA  88 44
         mqo  899438 ..  899456 +  -4.4  -2.79183   CTTCAACATGCGCTA             CGATGCGG CAT CGGCTTCG             TATGCTAACGATAGA  45 118
LPH39_RS03715  903249 ..  903261 +  -6.3  -3.54307   GGATGCAAGCTCGGT                GCAAT GAA ATTGC                TTTACGGCCAGTGTT  61 75
        miaB  917698 ..  917715 +  -3.3  -4.56597   ACACAGCAACACATC             GCAGTGG TTAC TCACAGC              TTTTTCAAAAAGCAA  66 98
LPH39_RS03775 NONE
        ybeY NONE
LPH39_RS03785 NONE
LPH39_RS03790 NONE
LPH39_RS03795 NONE
LPH39_RS03800  923482 ..  923498 +  -2.2  -2.87132   AAACGAAGGAACATG              AGTGGA AAAAC TCCACC              TGTGTGGCCACCACA  40 274
LPH39_RS03805  924359 ..  924388 +  -2.8   -3.6715   GCAGCGCCCCCATAA       GTGCTCCCATCG TACCGT TGATGCCAGCAC        TTTCGACTTCCCTCC  51 178
        asnS  959717 ..  959729 +  -4.7  -3.08046   CCTATCCACGTGCGC                CCGGC AGC GCCGA                ATTTTGAAATAGGCC  49 6
LPH39_RS03910  961865 ..  961875 +  -2.4  -3.12327   ACGACCGTTACAAGC                 GCCG CAT CGCC                 TATTGGCTCTAACAA  43 3
LPH39_RS03915  962618 ..  962628 +  -5.4  -3.65827   GCGCGCAAGAGGTGT                 GTAC TGC GTAC                 TTTGGGTGAGAATTC  59 6
LPH39_RS03925 NONE
        murB NONE
LPH39_RS03935 NONE
LPH39_RS03950 NONE
LPH39_RS03955  970751 ..  970774 +  -5.2  -2.72379   AGTGGTACGCAGCGC          CTGATGGTCC CCTC GCACCAGCAG           TGCTTCACACCTTAC  48 249
LPH39_RS03975  973974 ..  973989 +  -5.4  -4.15222   ATGTTTTTTAAGAAC              CCCGTCT ACA AG-CGGG              TTTCTTGCCACCCAT  66 40
LPH39_RS03980  976182 ..  976208 +  -6.7  -4.39002   AACAACTGTGCTCTC        TATCAC-CTGAC AAGA GTCAGGGTGATG         TTTTGTGAGCAGTTT  74 65
LPH39_RS03990  977905 ..  977920 +  -4.7  -3.14284   AGATCCTGGCGCACA              TCCAC ACCAAC GTGGA               CTTTATTCCTAAAGG  50 298
LPH39_RS03995 NONE
LPH39_RS04000 NONE
        grxC NONE
LPH39_RS04040  992801 ..  992814 +  -9.5  -3.27676   ATACGGATGGGATAG               GCGCG TAAC CGCGC                TCTATTTGAGTCAGT  73 224
LPH39_RS04050 NONE
LPH39_RS04055  996401 ..  996415 +  -2.1  -2.60075   CACATACAGTAAACG               CGATG CACAA CATTG               ATTCATTCGCAAGCC  39 10
LPH39_RS04060  997278 ..  997296 +  -5.4  -4.43477   AAGCAGAAAAATGCC             TAAGATTT TCG AAATCTTG             TTTTACTTGAATCAA  69 244
LPH39_RS04075 NONE
LPH39_RS04080 1000969 .. 1000984 +    -4  -4.65916   TCATTCAGTCTGGCC              TT-CGCC GAC GGCGCAA              TTTTATTCACATGAC  68 238
LPH39_RS04085 1001556 .. 1001570 +  -6.4  -2.62792   GGGCGAACCCCGGGA               CGCTAA GCT TTGGCG               CTATTTCGCATCGCT  53 368
LPH39_RS04095 1006601 .. 1006650 +  -6.6  -2.70932   AAAACAAGTCGAAGC CCTAAACCTGCACTCTTTGCCATC TTAC GATGGCAAAG-G-GCAGACTTAGA TCATTGCCAGCAACA  53 101
LPH39_RS04110 1011192 .. 1011204 +  -3.3  -2.52464   GAACCCCAGTATATT                GGGCA CTC TGCCG                TACGTTGAACACCCC  42 235
LPH39_RS04120 NONE
LPH39_RS04125 NONE
LPH39_RS04145 1022143 .. 1022155 +  -2.7  -2.68338   GGCCATTTATCCTTT                TTATG AAC CATAG                TGGATTTCAGTTACT  41 109
        hemA NONE
        prfA NONE
LPH39_RS11985 1055902 .. 1055912 +  -2.4  -3.45945   GTCCTCCATCTACAT                 CGGG AGA CACG                 TTCCTTCTCCATCGC  47 438
LPH39_RS04305 1060882 .. 1060901 +  -3.4  -2.85008   ATGAATCAGCGATCC            GCAGCAGG CAAC CCAGCTGG             ATGTTTGTTATGCCG  43 155
LPH39_RS04315 NONE
LPH39_RS04320 NONE
LPH39_RS04330 1063252 .. 1063294 +   -12  -2.58544   CAAATCCAGAAGTAG CACGCTGACTCACCGCAC ACTCACC GTGCTGTTGGTCGGCGTG GTTATCACCCTACCC  78 64
LPH39_RS04335 1063977 .. 1063993 + -10.1  -3.72695   CTTGCGTGGATATAT              CGCGGGA CAC TCCCGTG              TTTGGTCAACACGAT  79 426
LPH39_RS04340 1066171 .. 1066181 +  -2.4  -2.83164   GTTCCGGCTTACAAC                 CCCC TAT GGGA                 TGTAATGATGACTGA  40 169
LPH39_RS04345 1066910 .. 1066922 +  -4.8  -2.85379   TGTGGTTCCAGCTTA                CTGG CCCAA CCAG                CTTGTTGAATTCTCT  47 525
LPH39_RS04355 NONE
LPH39_RS04360 NONE
LPH39_RS04365 NONE
LPH39_RS04370 1070539 .. 1070553 +  -7.8  -3.66666   GACCACTCTTTTAGC               CGCCTG CTG CAGGTG               TTTGAGGCTTTTGGC  68 448
LPH39_RS04405 1076200 .. 1076215 +    -6  -3.20858   TCCAGTATCCACTGT              CACCGC TATC GCGGCG               TTCGTGCATATGATC  55 280
LPH39_RS04410 1077914 .. 1077925 +  -4.4  -2.73619   AATCCAAGTGCTGTA                GACA TCAA TGTC                 GTTTAACACGTGCTT  44 166
LPH39_RS04415 1078916 .. 1078936 +  -2.6  -3.76839   TACATCTATGAAGGC            CACCAA GCCTACCCA TTGGTG            TTTGAATTGAACTTC  51 55
LPH39_RS04435 1090559 .. 1090589 +  -4.6  -2.76418   TAGATATTACGCTCC       GCCAATATCGGTGG TGT CCACTGATACAGCC       ATGTTTCTGTCAACG  47 257
LPH39_RS04465 1101388 .. 1101404 + -10.9  -3.07501   TTCGATGCCCGCATC              TCTGCTC AGA GAGCAGA              TATTCAACATTCTAT  74 465
        trxA 1108501 .. 1108512 +  -2.2  -3.23715   CTTATTCGGCCCCAA                CGCGC GCT GC-CG                TATTCTCAAAATTCT  43 133
         rho NONE
       cas5c NONE
       cas8c NONE
       cas7c 1119028 .. 1119041 +  -2.4  -2.92094   CCGTTGACTCCATCG               GATC GGAGCA GATC                GTATTTTCTGTCAGA  40 281
LPH39_RS04545 1129346 .. 1129359 +  -3.7  -3.72576   CACCAAACCAAATAG               CGAGG TACA CCGCG                TTTCGTCAACCCAAC  53 247
LPH39_RS04550 1130647 .. 1130667 +  -5.4  -3.49102   TGGCTGAGCACCGCG            CGTCTTCT TGGAC AGGGGACG            TTGTCTGCCCGATCT  56 395
LPH39_RS04560 1130899 .. 1130912 +  -6.7  -3.30474   CACAACGATTGACCT               GTGCT GCCG AGCAC                TTCGTGGTTCTCCCA  59 68
        proC 1139560 .. 1139584 +    -3  -3.65883   GCTACCACGTGCATG         TCATGCA-CGTT CGC AACGATGC-TGA         ATTTTTTAACTGCTC  51 317
LPH39_RS04585 1143012 .. 1143037 + -16.2  -3.57144   CTGATGCTGTCACCG         GCGCGCCACT GCTTAA AGTGGCGCGC          TTTCCGGGTGCAAGC 100 37
LPH39_RS04590 1145284 .. 1145304 +  -3.9  -2.78935   GCGATCCAACAGCAG            CACCATGTT CTC AACAGGGCG            TGTGCTCAAAAGTCT  45 368
        ssrA 1146217 .. 1146238 + -12.3   -5.7946   CCACCAATCACTAAA           CCCCAATCG TTCT CGGTTGGGG            TTTTTTTCTTGCCAG 100 35
LPH39_RS04675 1166364 .. 1166381 +  -2.7  -5.49729   CCACTATTCAAAAAA             CCAA-CGG TTC CTGGTTGG             TTTTTTTGGCTCGTT  84 148
LPH39_RS04730 1176791 .. 1176801 +  -8.2  -3.02829   CTTGGTGATGCGCAC                 GCGC AGC GCGC                 TCTTGAAGGCGTCTG  58 149
LPH39_RS04780 NONE
LPH39_RS04785 1181105 .. 1181148 +  -6.6  -4.14243   CACCAGCAGGACACC TGCATCGCGCAACGGGGTCAG TGC CTGTCCCAGT-GCGAGGTGTG TTTTGGGATCCAGTC  68 364
LPH39_RS04810 1183126 .. 1183148 + -10.4  -3.06696   GTGGCGGGTGTCAAC           GCGCCCCGCC GCA GGCGATGCGC           TGTCTTGGAGCCGCG  72 111
LPH39_RS04840 NONE
LPH39_RS04845 1192253 .. 1192270 +  -4.9  -3.38699   CATGAAAAGAGTCTG             GACATTA TTCG TAGTGTC              TGTGTTGTTTCTGGC  52 179
LPH39_RS04855 NONE
LPH39_RS04860 1194251 .. 1194261 +  -4.6   -2.8005   CAGTTCCCTGATGAA                 GGCG AGG TGCC                 ATTTCGGGTGTATTT  47 151
LPH39_RS04865 1194963 .. 1194974 +  -5.8  -2.60901   AGGCTTAATAATGCT                GGTG ATGG CACC                 CTTGATTAGCACTAT  51 89
LPH39_RS04870 NONE
LPH39_RS04875 1200038 .. 1200083 +  -8.3  -2.63348   GCATCCTGGATTTAG TCGC-TGCACCCCGCTCAGAAA CGC TTTCTGGATGGGGTGCGGGAGG GTTCATATTGATGCA  61 41
LPH39_RS04890 1201252 .. 1201263 +  -7.2  -2.54193   CGATGATTGCTCCAA                GCGG CACG CCGC                 TCAGTTGCAGTCATC  56 41
LPH39_RS04900 NONE
LPH39_RS04905 NONE
LPH39_RS04910 1203463 .. 1203473 +  -3.2  -3.27786   AAAGTATACTATCAT                 GGTG TAG CATC                 TTGATCGATTTTCGG  48 103
LPH39_RS04915 1203722 .. 1203742 + -11.1  -3.79687   CGTCGACTTCTGCTT            GCGGCCGAT AGC ATCGGCCCC            TATTTTGTGGCGCAT  80 185
LPH39_RS04945 1206665 .. 1206676 +  -2.2  -4.41616   CACAAATACGATGGG                CGTC CGAG GATG                 TTTCTTTGGGGACAT  61 136
        mrcB NONE
LPH39_RS04970 1214920 .. 1214939 +  -6.4  -2.55999   CAAACGTTACTGAAC            CGTACCAA CAGA TAGGTACG             CTTGGTCTACCATGG  52 28
LPH39_RS04975 1217239 .. 1217251 +  -7.7  -3.05384   CAATATCGAGAGCCT                CACCA CTA TGGTG                TTCGCTGAAGCCAGG  60 224
LPH39_RS05000 1222130 .. 1222147 +  -2.7  -2.90392   CGTGCGAGGCCAATC             GCTGACGT TGA ATGTC-GC             TCTGGTTGACCCCTC  42 21
LPH39_RS05005 NONE
LPH39_RS05010 1225092 .. 1225113 +  -2.9  -2.73007   GTATCGCTTACATGC           GCTCTGCTAC AGT GGAGCGG-GC           ATTTCCAAACATCTT  41 65
LPH39_RS05015 1225981 .. 1225997 + -15.1  -4.66987   TTGCACACAACAAAA              CGGGCCC TAA GGGCCCG              TTTTATTACGCTGTC 100 71
LPH39_RS05025 1227740 .. 1227761 +    -3  -3.95873   CCACTCAACACCGGA           TGCGCT CACGGAGAAC AGCGCA            ATTTTTTTATAGAAA  54 61
        aceF 1229733 .. 1229747 +  -8.6  -3.22491   AAAAGGAATGCCCCC               CACATG GCA CATGTG               TTGATGCTCAAATTT  64 210
        lpdA 1231973 .. 1232023 +  -5.4  -2.87211   CAGCCTATCGACATT CAAACAAC-ACCTTCTGGTTCGG CCATCA CCGAGCCAGATGGTCGATGTCCG TCTGTACAGCGGGGT  49 69
LPH39_RS05040 1233747 .. 1233759 +  -6.3  -3.63627   CACGTCGTCCCAGGC                GTTTC TCT GAAAC                TTTCCAGTATCAAGC  63 88
LPH39_RS05050 1235662 .. 1235674 +  -3.3  -3.27475   ACACTGCGCAGCATC                CGGGT ATC AACCG                TGTTCTGCTCCAACA  48 146
LPH39_RS05065 1239932 .. 1239942 +  -3.2  -4.47786   ACATCGGTATATCGC                 CGTT CCA AGCG                 TTTCTTTCGCTGCTT  63 210
LPH39_RS05070 NONE
        surE NONE
LPH39_RS05080 1243616 .. 1243631 +  -2.6  -4.57569   CCTGCTGTCAGGGAT              GTCGGAT TAA ATCC-AC              TTTTTAAGGACATCG  65 16
LPH39_RS05085 NONE
LPH39_RS05090 1245231 .. 1245241 +  -5.4  -3.13403   TGCTCTGACTCCACA                 TCGT GCA ACGA                 TATTGCTCCAGCACG  52 210
LPH39_RS05095 1245886 .. 1245904 +  -4.6  -5.55769   GCATTTTCCGAGGTT             GAAAGG GTGGATG CCTTTC             TTTTTTCTTGTGCAC  93 205
        msrB 1252682 .. 1252694 +  -4.8  -4.67353   GCCCTCGTCCGATCT                CGGT CAGCC ACCG                TTTTTAAGTAAGTAA  73 461
LPH39_RS05125 NONE
LPH39_RS05130 NONE
LPH39_RS05135 NONE
LPH39_RS05140 NONE
LPH39_RS05145 NONE
LPH39_RS05150 NONE
LPH39_RS05155 1266302 .. 1266315 +  -2.3  -3.09327   TTCACGGCAGATATC               CATCC GGCG GGCTG                TGTTGGATCCAATCG  42 152
LPH39_RS05160 1268300 .. 1268323 +  -2.3  -4.15565   CGCTGACAGCAGCAT          GAGTCAGCG CTCTGA CGATGCCTC           TTTTAACATCCTGCC  57 84
LPH39_RS05180 NONE
        ubiH NONE
LPH39_RS05190 1277251 .. 1277272 +  -6.5  -3.07344   CTGATATCGCGATTG           GGTGGCTCT CCAA ATAGCCGCC            TGTATTCCCGACTAA  54 246
LPH39_RS05200 NONE
LPH39_RS05205 1279078 .. 1279088 +  -3.2  -3.45031   CCATCAAAGACCCAC                 GTTG GTG CAGC                 TTCGATTTTTGACAA  50 3
        cysG NONE
        cysK 1283218 .. 1283230 +  -9.1  -2.69964   GTACATATCGGCAGT                GCCAG CGC CTGGC                TGCTGTACTTGCCGA  59 353
LPH39_RS05260 1291303 .. 1291318 +  -4.6  -3.55622   CCCCTTGATGCACGC              CTTCCC ACTG GGGACG               TTTGCCACCGTTGCA  55 196
        gltX NONE
LPH39_RS05270 1293337 .. 1293348 +  -3.6  -3.17527   GCGACCCAGCCGCCT                CCGC TTAA GTGG                 TGTTGCTGCTGACTG  46 18
LPH39_RS05275 NONE
LPH39_RS05285 1297523 .. 1297544 +  -6.5  -2.73875   ACCGATAACACACTC           CTG-GCTCGC AAC GCGAGCACCG           TCGTGTTCGAACGAC  51 185
LPH39_RS05295 1300922 .. 1300940 +    -6  -3.18199   CCAGATACTCCCCCC             TACACATG CAA CATGGGTA             TTGAATTAAACATTA  55 211
LPH39_RS05305 1303931 .. 1303972 +  -8.1  -4.26903   GAATATCTAGTTAGT GAGTAGGCATTACTGCAAT CGAT ATTGCAGTAATGCGGGGTC  TTTTGCTGCGCTCAC  75 104
LPH39_RS05325 1311680 .. 1311695 +  -3.2  -3.51858   CGACCCGTGGCATCG              TAACCG GTAT CGGCTA               TTGATTCGTTATTTA  50 92
LPH39_RS05425 1336670 .. 1336686 +  -4.4  -3.05384   GCACCAGCAAGGCAA             CGAC-CG GGCT CGCGTCG              TTGCCTCCACAGCAA  47 69
LPH39_RS05430 1337157 .. 1337181 +  -4.1  -2.87132   CACGCAATGCGACCA          GCATGCCCTGT CGC ACGGGGCGGCC          TATCTCGCGCCCCAG  43 378
LPH39_RS05475 NONE
         dcd NONE
        xseA 1354215 .. 1354226 +  -7.2  -3.06796   CGCTGCACTGTTACA                GCCG ACGA CGGC                 TTGCATCAACTACGA  59 65
         rnd 1358783 .. 1358796 +  -6.7  -3.68351   GCATCAGCGACTGTT               CCCTA TCTC TAGGG                TTTGGCTGATAACCA  63 203
LPH39_RS05530 1359408 .. 1359427 + -10.8  -2.67055   TGCCAGTAATATCCA            CGTCTTAG ATGG CTAAGACG             TGCTATCACTCTTAT  72 181
LPH39_RS05590 1372204 .. 1372222 +  -7.4  -3.44146   GGCTGCAACTTCATC             CCACTTCG CCA TGAGGTGG             TTGATTGTAAGCCAA  62 310
        rimK 1375164 .. 1375179 +  -6.2  -2.63182   ACAGTACTTGCGCAA              TTGATG ATGA CATCAA               AGTTTATTTCTTGGG  51 99
LPH39_RS05600 NONE
LPH39_RS05605 1377909 .. 1377921 +  -5.5  -3.22388   CGGTAATTTGTGCAT                CTCCA ATC TGGGG                TTCATGCGTTCAGTA  52 183
LPH39_RS05625 1381915 .. 1381930 +  -3.3  -2.52623   GATAAGTATTATTTT              TGTGA CTTTTT TCACA               CTCTTATCCAAAAAG  42 275
LPH39_RS05635 1385069 .. 1385083 +   -10  -3.85817   GTACTGGACAACACG               TCCAGC AAC GCTGGA               TTTCTCACCAACGCT  79 187
LPH39_RS05640 1385651 .. 1385675 + -17.2  -3.18582   GATCGATGTCGATGA          GAAGCCCGCC TTGAT GGCGGGCTTC          TTGGTGAATACGGTA 100 89
LPH39_RS05645 NONE
        pilB 1388326 .. 1388340 +  -4.2  -3.44851   CGCACGGAAGGTGAT               GCCG AGTTGAG CGGC               TGTCTTTGTCTTATT  52 168
        sucC NONE
        sucD 1393804 .. 1393814 +    -4  -4.57073   CACTCTGGAAAATTG                 CTTT CTC AAAG                 TTTTTCAAAAACATC  68 43
        dnaA 1402052 .. 1402063 +    -3    -3.767   GATGACTGGGACAAA                CTTA TACG TAAG                 TTTAGTGAATAAATG  51 2
        dnaN 1403815 .. 1403827 +  -4.1  -5.61689   GTTAAATCAGATTCT                CATGG AAT TCATG                TTTTTTATTGATTTT  91 384
        recF 1405667 .. 1405678 +    -3  -4.29304   TATTTTTCTTGAATT                GAAT CAAT ATTC                 TTTGTGTTGTACTCC  59 457
        gyrB 1408263 .. 1408274 +  -2.2  -3.48276   GTTATTACGCACGGA                TAGC TGTT GCTG                 TTCTATCAGAAAACG  47 42
LPH39_RS05720 1409115 .. 1409128 +  -3.9  -3.16742   GATTGTATTTTTGGG               GAATT CAAT AATTC                TTACTCAAAATTAAA  48 15
LPH39_RS05725 NONE
LPH39_RS05730 1411766 .. 1411782 +  -5.8  -3.40867   AGCTTAGAAACTGCT              GCGGTG TCAAT CACTGC              TTGATTCATGGATCG  57 512
LPH39_RS05735 1412511 .. 1412536 +  -7.6    -3.646   ACTATAGGCCTAATG         CTGTGGACTGG ACTGC CCAGTCC-CGG         TTATCTGTGCTTCCC  68 34
        exbB NONE
LPH39_RS05745 NONE
LPH39_RS05750 1414296 .. 1414312 +  -9.4  -5.92337   ATATCACCACAAAAA              CGCCAC TTGAT GTGGCG              TTTTTTTTAATATCT 100 79
LPH39_RS05755 1415031 .. 1415046 +  -7.6  -3.42078   CAGATTGGCATCGAA              TTCTCG CATG CGAGAA               TTGTAGTCCCCTGTG  64 185
LPH39_RS05760 NONE
LPH39_RS05765 1418365 .. 1418386 +  -2.9  -4.56436   TTGTAGGTTGCCTGC           ACTGTGCGCG TGG CGCG-ACGGC           TTCTTTTCTTTCATC  65 205
        hemF 1419589 .. 1419608 +  -2.8  -3.98745   CACAGCGTGCGGATG            GCACG-TGG AAT CAAGCGTGC            TTGTTTCGCTGCTTA  56 289
LPH39_RS05775 1420734 .. 1420744 +  -2.4  -3.33492   TGCAAACCACTCCCA                 GGGG CAG CCCG                 TTGTCGCGTGCCTGC  45 66
LPH39_RS05780 1421172 .. 1421182 +  -8.2  -3.60151   CGTTGCGTTGTGAAG                 CCGC TAT GCGG                 TTCTGCTTTGACGAC  69 120
LPH39_RS05800 NONE
        pilV NONE
LPH39_RS05810 NONE
LPH39_RS05815 NONE
LPH39_RS05820 NONE
LPH39_RS05825 1433770 .. 1433783 +  -6.7  -3.65522   CTCGCTCTCCTGCAA               GCTAG TTGT CTAGC                TTGTTACCGTCAATC  63 239
LPH39_RS05835 1437749 .. 1437774 + -13.3  -3.27498   AGATACGCAATGGAA         CACCAGGTACC TGAA GGCACCTGGTG          TTCATATGCCCTATG  91 440
LPH39_RS05850 1440004 .. 1440021 +  -4.9   -3.2812   TATTGCTATCAGGCA             GTCAA-GC CTG GCATTGAC             CTTTTGTGGTGCATC  52 252
LPH39_RS05855 1440507 .. 1440523 +  -2.1  -3.53444   ATTTTTTCGTTCTCT              GAGACAC GCT GTGACCC              TTTAAGGAGGAGTGA  47 67
LPH39_RS05860 1441979 .. 1441990 +  -5.8  -3.06679   CTTGCGGGACATTGT                CGGA TATA TCCG                 TTGCATGGAGGTATT  53 207
        rlmJ 1443479 .. 1443494 +  -4.7  -3.81951   TGATGTTTTGTTTTA              GCGAA GATGCA TTCGC               TTTGGTCATGTCAAG  59 214
LPH39_RS05870 NONE
         mfd 1448376 .. 1448391 +  -2.6  -4.32903   GCCATCCCATGGTCG              CAA-CGT TCT ACGATTG              TTTTCGCTGTTTGCT  62 179
        aroQ NONE
        accB NONE
        accC 1451846 .. 1451866 +  -3.9  -3.42775   CTGGTGGAGGCGCGG            GTGGCCATC CCA GATGACGAC            GTTTTCTTGGTGGCT  50 417
        hmpA 1456638 .. 1456661 +  -9.7  -3.11727   GCCTATTGGGAGTAC          TCATGATCG TTTAGC CGATCATGA           TGTGTTGGACTTGTT  70 429
LPH39_RS05910 NONE
LPH39_RS05915 1459729 .. 1459739 +  -6.8  -3.78775   CCTTACCTTGTCGTG                 CCGA CGC TCGG                 TTTCATGATGAGGGA  63 150
        bioB 1466160 .. 1466178 +  -5.2  -3.38812   ATGCGGAGAAAATCA             CACCGTAT ACA ACGCGGTG             TCTTATTCACGACAC  54 54
LPH39_RS05940 1467755 .. 1467773 +  -3.1  -3.99407   TGCAGGAGGACACGC             GCCTC CGATATGGA GAGGC             TTCTTTCCAGTTTAT  56 225
LPH39_RS05950 1469810 .. 1469825 +  -6.1  -2.80016   AGCCCTGAAGTGCCA              GCCTG CGCATA CAGGC               TACTTGCTGATGCAG  52 179
LPH39_RS05955 1471202 .. 1471232 +  -4.1  -3.66424   GTCCATTTTTCGGTA      TTTCGGCCAAGCGA ATGA TCG-TTGATCGAAA       TTTGGGGTCGTTTTG  55 507
        dacB 1473785 .. 1473795 +  -3.2  -4.40199   TGTGCCCTGTACTTA                 GGTA GGT TGCC                 TTTCTTCGTCTTTTT  63 316
LPH39_RS05970 1475995 .. 1476007 +    -2  -4.18908   CTACTTTCCAATTAT                TACA ATGCA TGTA                TTATTTTAAAAATAT  57 443
LPH39_RS05975 1479577 .. 1479597 +  -3.9  -3.09933   GCAGCATATCATCGT            CCTGTTAGG CGT CCTCACAAG            TTACCTGCATTCAGA  48 49
LPH39_RS05980 NONE
LPH39_RS05985 1479954 .. 1479967 +  -4.5   -3.2375   CATTGAAGCCAGGTG               TGGGC GTGA GTCCA                TTAGATTATGAAGTG  50 168
LPH39_RS05990 1482993 .. 1483003 +  -2.4   -3.4582   CTCCCTATGCGAGAA                 GGTG TAT CTCC                 TCTTTAATGAGGTGA  47 110
         rrf 1483164 .. 1483195 + -15.3  -5.75599   AGGGTCTTTTCCCAT      CGAACCCTCAGCT TGAATT AGCTGAGGGTTTG       TTTTTTTATGCTTTC 100 37
        mutM 1484564 .. 1484589 +  -5.3  -3.14132   GCACGCCGCCAGCGG         TGAACGTTGCG GCGC CGCAACGCACG          TTCCTGAAACCACAA  50 471
         ffh 1486801 .. 1486811 +  -3.2  -3.36991   CTATTTGCGACTGGG                 CCGA TGC TTGG                 TGTTTGCCCATGCTA  48 322
LPH39_RS06015 1488652 .. 1488665 +  -6.7  -3.23899   CATTTTGCGATTGAG               TCCAC CTTT GTGGA                TTGACTTACTTAGCG  57 316
        yhbY 1508413 .. 1508434 +  -2.3  -3.44848   TTGCCAAGCCCTTAA           GCACACGG AGGTCAG CC-TGTGC           TCTTTACTCAGGAAC  47 26
LPH39_RS06090 1509079 .. 1509100 +  -5.9  -2.78154   ACTCAGATCAGTGAC           CATGCGT GCAAAACA ACGCATG            TCATTGCCTGTATAG  52 284
LPH39_RS06095 1509584 .. 1509609 +  -6.1  -3.34043   AATGTGGCGAGTCTG         TTCGGTTCATC GTTG GGTGTGCCGAA          TTGTCAACTAATAAG  57 50
LPH39_RS06105 1512334 .. 1512355 +  -8.8  -3.41125   CAACACGTCGTGATG           CAATCGCA ACATGC TGCGATTG            TTGTCGATGTGTGGC  66 58
LPH39_RS06115 1513052 .. 1513068 +  -2.2  -3.68324   GTGGTGCGATCTACA              CGCTGA TTGAC TGAGCG              TCTTTCTTGCCGATG  50 12
LPH39_RS06120 NONE
LPH39_RS06125 1515521 .. 1515533 +  -2.6   -3.5399   CCGGCAGACGGATAA                CGGT AAGTA GCCG                TTGTGTCGATCTGAT  49 26
        waaA 1518147 .. 1518160 +  -4.5  -3.52341   TATTTTTACGTCAAA               CCTTG ACTC CAGGG                TTGTGATGTTGGAAT  55 144
LPH39_RS06140 1520840 .. 1520862 +  -2.7  -3.85817   TTGTTGTGAGGCGAA           TACTCGG CTATCGCTT CCGAGTG           TTTCTCGCAGCAGGT  54 72
LPH39_RS06145 1522791 .. 1522805 +    -5   -2.9462   CAAACAGTATTCATA               TGATCA TTT TGGTCA               TGATTTCGATCACTC  49 453
        rpsP NONE
        rimM NONE
        trmD 1525488 .. 1525510 +  -2.8   -3.1637   CCCACACCCGAACCC          GTCGTACGT AATGAC ACGTAC-AC           TTAATAAACGTATCT  45 153
        rplS 1526330 .. 1526343 +  -3.7  -3.54951   AATCGCATTGCCTTA               CAGCG CCAG CGCCG                TTCTATGATGCGATG  50 409
         map 1527347 .. 1527373 +    -3  -3.83262   GTGACGCCAACCTGG        C-GCGCGTCGA GTTGGA TCGATGTGCAG         TTATTGTGCCGTTTC  54 80
        dapD NONE
LPH39_RS06185 1531324 .. 1531342 +  -3.8  -3.13566   CCCAACTTCTCATTC             TCATGAGC GAT GTTCTTGA             TCTTGCCTGTGATCT  48 174
        dapE 1532748 .. 1532765 +  -7.7  -5.29445   CATTGATCAACACAT             CCGCATC GCCT GATGTGG              TTTTTGTTATTCAGG  93 314
        asnB 1535015 .. 1535025 +  -6.8  -3.35798   CGGCGGCAACGTTGT                 CGTG GAT CACG                 TTGTCGATCAGGCGT  56 488
LPH39_RS06205 1538385 .. 1538395 +  -3.2  -3.55761   ATGTTGCCGACGTTC                 TCCA TCA TGGG                 TTTCAAGCATCGCTA  50 256
        lexA 1540732 .. 1540743 +  -5.8  -2.81045   CTTTTTCTGACGTTG                TCGC TCTG GCGA                 TGCTGTTGTACGTGA  52 68
        recA 1541927 .. 1541946 +  -2.8  -3.62572   CATTATCGCGGATGA            CAGCAGGA TTAG TGTTGCTG             TTTCCCGTGGTGATG  51 45
        alaS 1545352 .. 1545369 +  -7.7  -3.22476   CCAGGTAATGTAGGT             CGGTTCA GTTG TGGACCG              TTCATCCTGGCTGAT  62 103
        csrA 1545683 .. 1545697 +  -4.9  -3.14344   CCTTCACAAGCCTAT               CCGCC AAAGA GGTGG               TTGGTACCCGGAGTG  50 79
LPH39_RS06235 1546260 .. 1546270 +  -6.8  -5.09221   TGCAGATGTTGACTA                 CCCT CAT AGGG                 TTTATTTTTGTTATC  87 486
LPH39_RS06250 1550778 .. 1550800 +    -4  -3.10895   GATTGCCTGAGAGCC           TTAGGGACGT TGC GCGTCCCACA           TATCTATCTCTTCCG  48 31
LPH39_RS06255 1552783 .. 1552800 +  -4.1  -2.54193   CGCCTGCAGGACAGA             CG-CCAGC GGT GTTGGACG             TCGCTTCGAATGCTG  44 110
LPH39_RS06260 1554327 .. 1554341 +  -4.2  -4.42788   TGCCACAGGCGGTGG               TCCTCT GCC GGGGGA               TTTTGTGGCGTTGGA  65 332
        lptF NONE
        lptG 1562883 .. 1562894 +  -4.4  -3.01712   CATTGCCAGCGACTG                CATG GAGC CATG                 TGTTCACGCACCCGA  46 346
        glmS 1566118 .. 1566130 +  -3.3  -3.94276   AGCATCGTCAACCTT                CCATG GGG CAGGG                TTTGTACGCTCTTTT  56 429
        speA 1570819 .. 1570836 +  -3.3  -3.96624   GTGTTGATCGCTTAT             GTGGGGT TGTG ACACCGC              TTTCTACTGCGGGTG  58 150
       coaBC NONE
         dut NONE
LPH39_RS06360 1579533 .. 1579550 +  -3.3  -4.29326   CACCACTTTTTAGTG             CCCGGTA ACGT TGCAGGG              TTTCTTCGATTTCCC  61 85
LPH39_RS06375 1582646 .. 1582661 +  -3.2  -4.08958   TTCGCTTCCCCATGA              GTTACG GATA CGAAAC               TGTTTTCTTTCATCA  58 439
LPH39_RS06385 NONE
LPH39_RS06390 1586210 .. 1586226 +  -2.1  -2.93447   CGCATTCAAGAAGCA              CCAGACC GGT GATCAGG              ATTTCTCGACGTTGC  42 310
LPH39_RS06395 NONE
LPH39_RS06400 1587929 .. 1587939 +  -3.2  -3.79787   GGTGAAAATAAAGCC                 GCTG CAA TAGC                 TTTGAATTGATCTCA  55 268
LPH39_RS06405 NONE
LPH39_RS06410 1589294 .. 1589310 +  -3.7   -3.1944   AGTTGGAGTAGTGCT              TCGGA TGCTTAT TCCGA              TTCAATGCTTTTCAT  46 518
LPH39_RS06420 NONE
LPH39_RS06425 1593089 .. 1593119 +  -4.7  -3.65738   GTTCGAGCAGCGTTG      CCTGCA-CATCGGC TGGC GATGGTGGTGCAGG       TTGTAGTTGTTTGGT  54 483
        tyrS 1596923 .. 1596940 +  -6.3  -3.72592   TATATCGCAGGTTGG             CACATCG TATA TGATGTG              TTATTCGTGCAGGTT  63 134
LPH39_RS06445 1599162 .. 1599182 +  -3.9  -3.09933   GCAGCATATCATCGT            CCTGTTAGG CGT CCTCACAAG            TTACCTGCATTCAGA  48 49
LPH39_RS06450 NONE
LPH39_RS06455 1599539 .. 1599552 +  -4.5   -3.2375   CATTGAAGCCAGGTG               TGGGC GTGA GTCCA                TTAGATTATGAAGTG  50 168
LPH39_RS06460 1602578 .. 1602588 +  -2.4   -3.4582   CTCCCTATGCGAGAA                 GGTG TAT CTCC                 TCTTTAATGAGGTGA  47 110
         rrf 1602749 .. 1602780 + -15.3  -5.75599   AGGGTCTTTTCCCAT      CGAACCCTCAGCT TGAATT AGCTGAGGGTTTG       TTTTTTTATGCTTTC 100 37
        mutM 1604149 .. 1604174 +  -5.3  -3.14132   GCACGCCGCCAGCGG         TGAACGTTGCG GCGC CGCAACGCACG          TTCCTGAAACCACAA  50 471
LPH39_RS06490 1609211 .. 1609259 +  -6.3  -3.44156   ATGCGGAATGTTTTA TGTGATCATGGCTATCAATAAT CGACTC ATTA-TGATGGTCGGGATCACA TCTTGTCTTGAATTT  59 439
LPH39_RS06500 1614966 .. 1614980 +  -2.8  -3.27498   GCCAACATAAGCAAA               TGTGAA CTA TTCGCG               TTACTGTAGCCTATC  47 73
LPH39_RS06505 1615627 .. 1615670 +  -5.2  -3.97042   ACTTTATTGCAGTAG CTGCGCAGGTCCTATGAGATC GGA GGGCTTG-AGGGCCTGCGGGG TTTAATTCCTCCTGC  64 9
LPH39_RS06520 1620514 .. 1620534 +  -3.2  -5.68039   CCGTCACAACGCCTG            CAACGGGA TTGCT TCTCGTCG            TTTTTTTATCCCTTT  89 95
        bioA NONE
LPH39_RS06570 1633060 .. 1633072 +  -3.3  -3.34222   CATTAGCATCTATTC                TGGCC CAT GGCTG                TTATCACGTGCTGAT  48 488
LPH39_RS06575 1633739 .. 1633772 +  -5.4  -4.39828   ATAGCTCCCAAAGTG     GC-TTCAGTACCAGA TTGAC TCTGGTGTTGGACGC     TTTTATCAAGCTGTT  69 8
LPH39_RS06580 1636172 .. 1636192 + -14.1  -3.30575   ACATATCGGTGATCA            GAGCACAGT GTC ACTGTGCTC            TTACTGCGTTTTTGT  93 50
        queD 1637018 .. 1637029 +    -3  -3.96387   GAACGGATAGATTGT                CAAA AATA TTTG                 TTTGGTTACATTCCT  54 468
LPH39_RS06595 1640424 .. 1640442 +  -7.5  -3.53224   CGGATGACTGCTTTG             GGTGAAA CAAGT TTTCACC             TTTGAAGAAAAGATG  64 328
LPH39_RS06610 1644055 .. 1644067 +  -7.7  -2.71263   CCCATAAGCGCGCAG                GCGTT TGT AACGC                TGATTGAGCAGCGTT  53 225
LPH39_RS06630 1650887 .. 1650900 +  -5.9  -3.36273   TATGACCGTATCCAG               CGTCG ATGC CGGCG                TTGATCTTGGCACCG  57 8
         rpe 1651781 .. 1651791 +  -6.8  -3.18383   GACCGAGATGAGGTA                 CCAG AGT CTGG                 TTGATGGATGCAGAT  57 181
        trpE 1655936 .. 1655951 +    -4  -3.14961   GATTTTCCTAACTGC              GTAATG AGTC CATTGC               TATGTTACTCATGCT  48 189
LPH39_RS06650 1656547 .. 1656557 +  -3.2  -3.12283   TTCTGAGGGATACAT                 CAGC TGT GTTG                 CTTTTGCATCAATTC  46 35
        trpD NONE
        trpC NONE
LPH39_RS06665 1659431 .. 1659442 +    -3  -4.09805   TTGCTTCGATCACAT                GTTT GTCA AAAC                 TTTCGTTGTTGATGA  56 234
LPH39_RS06670 1660947 .. 1660957 +  -5.4  -3.62775   GGTTTGATCTAGCGA                 TACC AAG GGTA                 TTATTGCAGCGTGCT  59 201
LPH39_RS06680 1664040 .. 1664065 + -11.2  -3.76837   ATTGTTTTCTTCGGG         TCGCCGGTAT TATTAC GTACCGGCGA          TTCTTGCATTCTCTA  81 79
LPH39_RS06690 NONE
LPH39_RS06695 1667861 .. 1667875 +  -2.8  -2.73875   CCGTCGCCGGCGATT               GACAGG CCG TTTGTC               TGATGTTCAAGAGAC  41 8
LPH39_RS06700 1669872 .. 1669903 +  -3.5  -3.38564   GCCCGGGGGGTGTCA      CAGGCGCGGCCGC AGTGAC GCGTACCCGTCTG       TTCTGCATCGCTTTG  48 8
LPH39_RS12025 1670301 .. 1670332 +  -8.6  -3.45532   GCGATCTGGGTTTCA      GTGCTCGTGGCAGC TTTC GCACCCGTGAGCAC       TATCTTTGTTACTTG  69 309
         tgt NONE
        yajC 1673013 .. 1673037 +  -8.5  -3.17194   GCGGTGCTGCAGCTG          GCGTCGCGCGA GAC TTGCGCAATGC          TTGAATTCCCCCGCT  64 71
        secD NONE
        secF 1676034 .. 1676052 +  -3.8  -4.19238   TGATTTGGCGCTCCC             TAGGGG GCTCGAA CCCCTG             TTTTAGCCTTGAGAG  62 196
        pcnB NONE
        folK 1677954 .. 1677970 +  -2.2  -2.90955   TGGCTTGGTACCAAT              CAGGTA GATAA TACCCG              CTTATTAGTCTTTAA  40 19
        panB NONE
        panC NONE
LPH39_RS06755 NONE
         pgi 1681983 .. 1682000 +  -7.1  -2.91467   ATATCGTAAGTGTGA             TTGATGT AAGC ACATCAA              TGTCCTTCCAGGTTT  57 378
LPH39_RS06765 1683629 .. 1683656 +  -2.6  -5.34365   GTTGGTTTGGTGATT        TCCTCGGTGAGA TTGG TTTCTCTGCGGA         TTTTTCTTCTTGTCG  77 57
        rimP NONE
        nusA NONE
        infB 1689980 .. 1690008 +  -2.3  -2.79248   TCGAACGTATTGAGG        TGGCGCGTACGTT GTA AGCGTACAGGTCG        TGCTTGGCTGTTAAT  40 9
        rbfA 1690496 .. 1690526 +  -4.8   -3.1478   CGAGTGTGATTAAAT      CTTG-CATTGGTG TGCAAC CACCAATGTCCAG       TGTTGATCCACTGCT  50 28
        truB 1691573 .. 1691587 +  -7.8  -2.71364   TTTCATTAGGTACCT               TGCGCT CCA AGCGCG               TCCTTCCAGCAATCG  58 106
        rpsO 1692039 .. 1692051 +  -4.1  -3.08639   GTTATTGGCAAAGAC                TGAGC ACA GTTCA                TCTGTTGAAAGTATT  47 133
         pnp 1694589 .. 1694624 + -22.2  -2.79183   TCCATCCTTAGCACA    TCCATTCATAACCTCG TTTA CGAGGTTATGAATGGA     TGTGCTAAGCATAGA 100 427
LPH39_RS06810 1696093 .. 1696117 +  -3.5  -3.32647   ATTAAGGTACTTCTG          TGTGTGGTTAG ATT CCAGTCACGCA          TTGGTATGGTTGACG  48 36
LPH39_RS12030 1702744 .. 1702755 +    -3  -4.51699   TGTTTAGCAGCGCAC                CAAT GGCG ATTG                 TTTTGTGATGGTTCT  64 284
LPH39_RS06835 1705876 .. 1705890 +  -6.4   -3.3197   TGCTCTAGAAGCCGA               CGCTAT CCA GTAGCG               TTATGACGATCATCT  59 409
        rfbB 1712174 .. 1712189 +  -3.9  -2.91924   TTGAGCGTATAGGGA              CTGCG GTGTAA CGCGG               ATTTCTGGAAAATAA  45 15
        rfbA NONE
        rfbC 1713680 .. 1713694 +  -5.6  -2.84325   CGCTTGCCGGTATAC               GTGCCG TGA CGGTGC               TGGTGTTTGGGGCGG  49 17
        rfbD 1714721 .. 1714757 +   -10  -4.56597   GCAGCGCATCCGGCA   GCAGCCACGTGGGCCGC TGTT GCGGCCC-CGGACCTGC    TTTTTCAAGCACGAC  91 153
LPH39_RS06890 1719804 .. 1719836 +  -2.1  -4.95876   TTTCTCCATAATTGT      GAATCTAATCACA CAATAAT TGTGATTAGAGTA      TTTTTAATTATAGTT  70 289
LPH39_RS06895 1720181 .. 1720219 + -16.1  -3.06133   AAGTAAGCTGTGGTG   TGGTCTAGGCAGCTGGA TGCAT TCCAGCTGCTTAGTCCG   TTCGATGAGACGTTG 100 35
LPH39_RS06900 1722416 .. 1722444 + -13.1  -3.09175   GCGGGACGAGATTAA        GCAGCACTCGAAC CAC GCGCGAGTGCTGC        TATTGGGTACAGCTT  83 370
LPH39_RS06905 1723115 .. 1723129 +  -7.8  -2.91681   AAAGTTGGTTGCCTG               GCCGAC CAC GTTGGC               TGTGTCGCGTTGCCG  59 89
LPH39_RS06925 1728015 .. 1728041 + -15.9  -2.62616   TCTTGGGTATGGAGG         CTGACGCACGG TGATC CCGTGCGTCGG         TGGTGTCCCGGATGG 100 41
LPH39_RS06930 1732130 .. 1732156 + -15.9  -2.62616   TCTTGGGTATGGAGG         CTGACGCACGG TGATC CCGTGCGTCGG         TGGTGTCCCGGATGG 100 41
LPH39_RS06940 1734702 .. 1734721 +  -5.8  -4.06491   GATGACTATGCTGTT            TTGCTATT AATG AATAGCGA             TTTGTATAACGTTGA  66 168
LPH39_RS06955 1737958 .. 1737983 +  -9.7  -3.14878   CTGGTTTAGGTGGGC         TCCTTCTCACC TGGA GGAGGGAAGGA          TATTGACTTGCCGGG  70 107
         mpl 1739963 .. 1739978 +  -6.8  -3.60296   GTAGTAGATAGCCTG              GGTCCG CTTG CGGATC               TTTGAAATGACAGTA  61 409
LPH39_RS06970 1743017 .. 1743040 +  -6.7  -3.82031   ATAGTCGTAGACTGG          TGCAGCGAT TCCGTC ACCGCTGCA           TTTCCTCGTCCTTGG  66 50
LPH39_RS06975 1743837 .. 1743854 +  -4.1   -3.0094   ATCCGATGAATCTGA             AGATGGT CAAC ACCATCC              TGTCTCTCGCTGAGC  47 104
LPH39_RS06980 1744585 .. 1744614 +  -6.3  -3.34609   CTGCCACGTTGTTCT       CGGCTTGCTTGCA TTGG TGCAAGCTCGCAG        TGTTGGTTTGCATCC  59 297
        rarD 1746654 .. 1746690 +  -6.5  -2.77658   GGATGGTGTGTCAAA    CAGTCGGCATCCTGT TGTATGT GCAGGTGGCTGACTG    TAGTTGGGTATGGTG  54 483
LPH39_RS07040 NONE
LPH39_RS07045 NONE
        acnB 1765417 .. 1765456 + -19.4   -3.0263   ATTGTACGTTGTCAT  CTCAACCAGCCCGGAG CCTGTCAT CTCCGGGCTGGTTGCG   TGTTAGGCAAGTGCT 100 47
LPH39_RS07055 1766130 .. 1766151 +  -6.5   -5.4505   CCACCAATATCAAAA           GGTCAACCG TGTG CTGTTGGCC            TTTTTTCTTGCCCGA  93 35
LPH39_RS07060 NONE
LPH39_RS07065 NONE
LPH39_RS07070 NONE
LPH39_RS07075 NONE
LPH39_RS07080 NONE
LPH39_RS07085 1774443 .. 1774453 +  -3.2  -2.73364   ACCTAGATGCAAGAA                 TCAC TCA GTGG                 TGATTGCGATAAAGA  42 56
LPH39_RS07090 1775510 .. 1775524 +  -7.8  -3.53012   ACTGCTGCTGCTGCT               CACGGC CTG GCTGTG               TTTGACGCGGCGCGG  66 77
LPH39_RS07095 1776191 .. 1776210 +  -8.6   -5.4505   CACCCATACCAAAAG            GTCAACAG TGCG CTGTTGGC             TTTTTTCTTGCCCGA 100 294
LPH39_RS07100 1778155 .. 1778171 +  -2.9  -2.92668   AGGTATTGCTCTGAG              GACGATG GAG TATCGGC              TATCCTTGCCTACTA  43 368
        tpiA NONE
        secG NONE
LPH39_RS07115 1779558 .. 1779569 +  -5.8  -2.87132   GGCGATTTCGTCAGC                GTGG AGTT CCAC                 TGTATCCCCCCCCCC  52 58
LPH39_RS07120 NONE
LPH39_RS07125 NONE
LPH39_RS07130 NONE
LPH39_RS07135 NONE
        nuoE NONE
        nuoF NONE
        nuoG 1786710 .. 1786723 +  -4.5  -2.91912   ATCGGTGCTGGTCGC               GTCAC GATG GTGGC                TGTATGAATGCATGG  47 5
        nuoH NONE
        nuoI 1788303 .. 1788322 +  -2.1  -3.09987   CTGCCGATGCTGCCT            TCCGTTG AGGTCA CGATGGA             TTGGGTGAATATTGC  43 18
LPH39_RS07165 NONE
        nuoK NONE
        nuoL NONE
LPH39_RS07180 NONE
        nuoN 1794455 .. 1794473 +  -3.2  -4.69868   TCGCGCATCTGGCCT             GAAGAT TGGGTGC ATCTTC             TTATTTTTATTCTAT  69 24
LPH39_RS07205 NONE
LPH39_RS07210 NONE
LPH39_RS07215 1801608 .. 1801618 +  -6.8  -3.75933   TGTACGCCGTGCGGT                 GTGC ATT GCAC                 TTTAATCAGGTGTCT  63 57
LPH39_RS07220 1803091 .. 1803106 +    -4  -3.87373   TTCCGAGGTGACTAA              GATGACC CGT GG-CATC              TTTCTCCAGCGTGTG  58 200
LPH39_RS07235 1808346 .. 1808375 +  -7.1  -3.07962   AGGTCTCGTCATTGG       CGTGCAGGTAGAA TCCG TTCTTCCTGCGCC        TATTCAGGTATCCAG  59 140
LPH39_RS07240 1810840 .. 1810869 + -16.5  -2.70826   TATTGGACCGTGAGG       ACAATGCCCCTGG ATGT CCAGGGGCATTGC        TGGTGTATCGGTGTG 100 175
        rsmD NONE
        coaD 1814174 .. 1814186 +  -3.4  -3.12668   CCCTCAGGGAGGAAC                CATG AAGAA CATG                TTGCGTGTGGCAGTG  46 73
LPH39_RS07260 1814815 .. 1814843 +  -3.1  -2.53905   ATGTGGCTAGCTTTA        TTTCAGAGACACC CGT GATGTCGTTGAAG        ATTAATGCATTGTGC  40 171
LPH39_RS07265 1815106 .. 1815118 +  -3.3  -4.05529   ATGAAAAGGAACCTC                CCGCA ATA TGAGG                TTATTTACTCGTTGT  58 15
LPH39_RS07275 1819909 .. 1819961 +  -6.5  -3.35679   CCTTTACTGGTGTTC CGGTC-GG-TGC-GGCGATGTCCA-TC CCT GAGTGGCCATTGCCTGCAGTCTGACCG TTGTAGATGCGGGCA  56 406
        dksA 1823254 .. 1823265 +  -3.6  -3.77808   GTCGCTGCAGTTCTT                CCGG AATG CTGG                 TTCTCTTCTCGTAAC  53 145
LPH39_RS07300 1824731 .. 1824747 +  -3.6  -5.00884   CACTAAGAAATGTTC              CGATCG TGGAC CGACCG              TTTTTTGAGGCGCGT  75 393
LPH39_RS07305 1825051 .. 1825106 +  -8.4  -3.36452   TCGACCATGCACACA TGGGGTTGCACTGATTTCCATGCG TTCACTGC CGCATGGAAATCATCTCAACACTA TTAGTGTTCACAGAT  66 12
LPH39_RS07310 1825624 .. 1825638 +  -4.2  -3.06261   AGCCATGCGTCAAGA               TCGTCA TCA TGGCGG               TCTTGACGCTTACGG  47 54
LPH39_RS07315 1825915 .. 1825928 +  -3.7  -2.55015   TCACGCAGGTCCAAC               CGGCG TAGC CGCGG                TGCCTTCAGTGCGGT  42 77
LPH39_RS07335 1830140 .. 1830156 +  -9.4  -5.48054   ATCCGTTCAAAAAAA              CCCAGC CCGAT GCTGGG              TTTTTTCATTTTGGT 100 273
LPH39_RS07340 NONE
LPH39_RS07345 1832872 .. 1832899 + -16.4  -3.21395   ATATTGCTGAAGTCA        TCCCTCCGCCAGT GCA AC-GGCGGAGGGA        TATTCTGCCGGCCAT 100 383
LPH39_RS07350 NONE
LPH39_RS07355 1835918 .. 1835951 +   -11  -3.84825   TCCCCGATACCGCAT     TGCGGAAACACCGCC AAGCA GGCGGTG-TGCCGCG     TTTGGTCTGCATCGC  80 209
        argC NONE
        argH 1838455 .. 1838467 +  -4.8  -3.36991   GGGGATTCGGACAGC                CGCA CCGCC TGCG                TCTTTCCGGGTACTG  52 74
LPH39_RS07375 NONE
        proB 1840080 .. 1840091 +  -5.8  -3.53012   TGTTTTGCTGCAGGG                GCTG TCTC CAGC                 TTTGCGAAGACAGAC  59 64
LPH39_RS07385 1841733 .. 1841750 + -12.7  -2.55205   CGGTGAGGGCCAAGT             GCGGCAC TGAT GTGCCGC              CTCTTGGTGTGTTGT  81 16
LPH39_RS07390 1842791 .. 1842801 +  -3.2  -4.27316   ATATTCCCGTTGTGG                 TCCG TTT TGGA                 TTTTAAATTAGAGAA  60 9
LPH39_RS07395 1844020 .. 1844038 +  -7.4  -2.86164   CCCAAGTGCTGGTCG             AGTTGCTG CGG CAGCAACG             TATCATCATTCCGAC  57 454
LPH39_RS07405 1846911 .. 1846924 +  -2.3    -4.431   GGCACTGTGGAGTGT               CCGTC AAAC GACCG                TTTTATGAATAGGTC  61 239
LPH39_RS07415 1850964 .. 1850981 +  -6.9  -4.54047   GCACATTGAACAATC             GGGCAGC ATCC GCTGCCG              TTTTCTGTCCAGTGC  76 268
LPH39_RS07435 1852581 .. 1852610 +  -2.7  -3.14581   CTCACGCATAAAGTG       CTGCTCCCAGGTA GCAG TACCCTCGAGCGG        TCTATTGCTCGCTTG  45 30
LPH39_RS07440 1853315 .. 1853327 +  -2.7  -4.72272   TTGGCCAATGCCGTT                TATGT CTT ACATG                TTTTTCATAAAGAAG  68 255
LPH39_RS07450 1853710 .. 1853723 +  -9.5  -4.20749   ACCGCATAGAAGAAA               GGCCC GGAA GGGCC                TTTATTGCGCTGTTG  83 40
        trbG 1857397 .. 1857415 +  -4.5  -3.20078   CTGAGTCAATGAGTC             TGTACCG CATCA CGGTTCA             TGTTGGTGTGCAGTC  50 409
        trbJ NONE
LPH39_RS07485 NONE
        trbL NONE
LPH39_RS07495 NONE
LPH39_RS07500 1861730 .. 1861744 +  -4.2  -3.66784   CCGAAATTTCCGTCA               GCCAAT CAA ACTGGC               TTGTCTTGCGCCTGA  54 73
        gcvA 1867489 .. 1867502 +  -3.1  -3.81414   GTAGCGGATCAAGCC               CTG-CC TTC GGTCAG               TTCTTCATTGAGAAT  54 368
LPH39_RS07550 1868780 .. 1868791 +  -5.8  -3.21218   TGGAACGAGGTCGAA                GACG ATTG CGTC                 TTCGTGCTGAGCCGT  55 256
LPH39_RS07560 NONE
LPH39_RS07565 1871488 .. 1871501 +  -5.2  -3.06492   AGGCCGCTTCCGCAC               CGCG AACCCG CGCG                TCTTCGGCTCGGTGC  51 157
LPH39_RS07575 1872275 .. 1872288 +  -4.5  -4.31412   TGATGGGACGATCAT               CGGTT TGGT AGCCG                TTTTCATCAATCTTT  65 298
LPH39_RS07590 1874156 .. 1874194 + -10.4  -3.54129   CACCGCCATGTCAGA   TGTTTGATGTAACACGAT ATC GTCGGGTTTCATCAAGCA   TTTCACAGGCATGTA  77 306
LPH39_RS07600 1875131 .. 1875169 + -15.6  -3.54129   AACAGCTGTGTCAGA   TCTTTGATGAAACACGAT ATG ATGGTGTTTCATCAAGGA   TTTCACAGGCATGTA 100 306
LPH39_RS07610 1875807 .. 1875817 +  -5.4  -3.42366   ATCATCCCATTGTGG                 TCCA GTT TGGA                 TTCTAAAATTTTAAA  54 9
LPH39_RS07615 1880170 .. 1880193 + -19.6  -3.27498   GTGTTGTGTTACTGG          GAGGCCCCGC AGAT GCGGGGCCTC           TTGGTATGGCCTCTG 100 45
LPH39_RS07630 1883026 .. 1883042 +  -3.6  -4.59109   GGTCTCTCATCCTGT              GCGGCG GTGTG TGTCGC              TTTTTACGAGGTATG  66 80
LPH39_RS07635 NONE
LPH39_RS07640 1886089 .. 1886105 +  -5.1  -3.69323   GGGATGGCGATTTCG              GTTGCTT GAG AGGCGAC              TTTGCGTGCTCATAG  59 355
LPH39_RS07680 1896974 .. 1897000 + -15.9  -2.62616   TCTTGGGTATGGAGG         CTGACGCACGG TGATC CCGTGCGTCGG         TGGTGTCCCGGATGG 100 41
         ffs 1898375 .. 1898391 +  -5.1  -4.33754   TTATTGAGGTACCGG              CATCAGG CCG TCTGGTG              TTTTCAATTGTGGTT  69 352
LPH39_RS07700 1903859 .. 1903871 +  -6.9  -3.69069   CGATCATAGGTCTGG                GCGTG GCA CGCGC                TTCTGTTGACATTCC  63 422
LPH39_RS07715 1912657 .. 1912693 +  -9.3  -4.59081   GTTCTGAAGCACCAT    AATGCCCGTCGTCCGGT TGC GTCAGTCGACGGGCATG    TTTTCTATGGCTTTG  90 34
LPH39_RS07730 1918448 .. 1918467 +  -2.8  -3.68738   TGGAAGAGATTGGAT            TGTGGCTT TTAC AAGGCACG             TTATATGTTCGAATA  51 481
LPH39_RS07790 1932920 .. 1932934 +  -2.9  -3.90328   TCAGGTGAATTTTAA               CAAAA CTTAT TTTTG               TTTATCCGACTTCTG  54 103
LPH39_RS07800 1936146 .. 1936162 +  -4.3  -2.59191   GCAATTGTGCGGCGG              CTGCGTC AGC GACACGG              GTTCTGAACGTGTGC  44 2
LPH39_RS07805 1936647 .. 1936658 +    -3  -4.98255   TTTTTCTTTCGTAAA                CTAT CGAT ATAG                 TTTTTATCATTCAAA  71 86
        rnpB 1937875 .. 1937891 +  -2.9  -5.24129   TAAAGTTAAAGTTTG              TGTCGTG CGC CACGGAA              TTTTTTATCGCCCGC  77 209
LPH39_RS07830 1943242 .. 1943259 +  -3.4  -5.14563   AGTATTGTTTGACCG             CGGC-GA TTATT TCTGCCG             TTTTTTAATAACAGG  75 349
LPH39_RS07840 NONE
LPH39_RS07845 NONE
LPH39_RS07850 NONE
LPH39_RS07855 NONE
LPH39_RS07860 1947377 .. 1947398 +  -2.3  -3.41961   GCTAAGGAAGTGCGC           CATGATTGAG TTG CTCA-TCCTG           TTGATTGGTCCTGCT  45 17
LPH39_RS07865 NONE
LPH39_RS07870 NONE
LPH39_RS07875 1948443 .. 1948466 +  -6.1  -3.62775   CTTTTTGTGCATGCC          GAACACGACT GTCAG AG-CGTGTTC          TTCTTCCGGCGTGAT  61 293
        ugpC 1958117 .. 1958146 +  -8.5  -3.14132   CAGACGTGCTATCAA       TGGGCTTACCCGT CTCA GCGTGCAAGCCCA        TTGATGAAAGGGACG  64 162
LPH39_RS07930 NONE
        sdhC NONE
        sdhD 1960273 .. 1960283 +  -3.2  -3.00585   TAGTTCGTATCGCGC                 TCGG GAA CTGA                 TAATTTGATGTCCTA  45 15
        sdhA NONE
LPH39_RS07950 1962951 .. 1962961 +  -2.4  -2.85503   TTGGCCTTGGGTTGA                 AGCC TCT GGCG                 GTTTCGCTATTGCGG  40 89
LPH39_RS07955 NONE
LPH39_RS07960 1963674 .. 1963684 +  -5.4   -3.0264   GCCGTTTTTTATCAC                 TTGG GTT CCAA                 TGTTCAACCCACTTT  51 40
LPH39_RS07965 1964908 .. 1964939 +  -6.5  -3.51232   ATTCAGCCAGCAGAG      GCGCTGCGCTATG AATGAG CATGGCACAACGC       TTGCTTTGACAGGAC  61 8
        lolD 1965653 .. 1965672 +  -6.4  -3.62906   TGAGCGTGGGGCCCT            CGTGTGCA TATC TGCATGCG             TTGGTTCTTCTCTTT  63 38
LPH39_RS07975 NONE
LPH39_RS07980 NONE
LPH39_RS07985 NONE
        msbA NONE
        lpxK 1972662 .. 1972679 +  -4.9  -3.61103   TCTTGACCCATTTCA             CGCACACA GCC TGT-TGCG             TTTACCATCAAATTG  55 192
LPH39_RS08000 NONE
LPH39_RS08005 1974948 .. 1974960 +  -4.7  -2.56828   TTCTGGTGGCCGTGA                CGCCG TGT CTGCG                ATCTTATGGATCTTT  46 26
LPH39_RS08010 NONE
LPH39_RS08015 1977877 .. 1977890 +  -2.4  -5.28176   TTGCATTGGCATCCA               TCAG TCCGTC CTGA                TTTTTTGTGCCTGAA  76 429
LPH39_RS08020 1978898 .. 1978908 +  -3.2  -2.87527   CTCCTTTATCCTTGC                 GGGT CAG ATCC                 ATTTCGTCGTAGCTG  43 468
        pncB 1982942 .. 1982976 +  -5.8  -3.27725   TTGACAGGGCGAGAG    CAGCAATCCGCAGGT CAAGTT ACCT-TGGATGGCTG     TCATTTTGTTGGTAC  57 432
         def 1994569 .. 1994579 +  -6.8   -3.0169   CCTAATATTCCTCAT                 CAGG ATC CCTG                 TCATTTATGAGAATT  55 114
         fmt 1995501 .. 1995530 + -10.7  -2.70932   CGAGATTTGCAGGTC       CGTGCGTGAGCAAC GGT GTTGCAC-CGCGCG       TGGTTGCGGCGCGGG  72 17
        rsmB NONE
LPH39_RS08105 1998888 .. 1998907 +  -5.6  -3.07043   ATGTATTGAGTGCAG            CGGCGCTC CATC GAGTGCCA             TCTTCCGGTGATAAA  51 370
LPH39_RS08130 2003113 .. 2003168 +  -7.4  -3.12402   GCGGCCCAGGCGGGC GCGGTGGTCATCAGCGCCGCCAGGTGC CCG GCAT-TGAAGGCGCTGTGGGTTGCCGC TTCGGTGATGATTTC  57 373
LPH39_RS08165 2006690 .. 2006724 +  -7.9  -3.60971   AGTAGCATTTGATTA    GCATCCCTGTGATGGAG GTC CGCCGTCAC-GGGA-GC    TTTCACAGTTAGGAT  66 133
         cfa 2008188 .. 2008204 +  -2.9  -4.19817   GAGACATGTAATGCC              ATGACCA GAA TGGTCGC              TTTTCACTGGCTGCA  59 214
LPH39_RS08180 2009149 .. 2009165 +  -5.1  -2.59742   GGACTTTCACAGCGC              CACTCGT GCC ATGGGTG              CTTCTAAGACTTCCA  48 2
LPH39_RS08190 2010605 .. 2010617 +  -7.7  -3.71527   TGTTGTCATTCATCA                CAGGA CTA TCCTG                TTTGGATGATTGGAA  68 353
LPH39_RS08205 2011934 .. 2011956 +  -2.7  -3.55603   TATATCCTGATCATC          GCCCA-CATG AATT CATGATCGGC           ATTTTGTTTGATGAA  49 401
LPH39_RS08210 2012657 .. 2012677 +  -3.4  -3.72576   TTAAAAATTCTGCTA           TGTAAGCTT CTTG AAGCTT-CA            TTTCCTGCAAACGCA  53 51
LPH39_RS08215 2013141 .. 2013158 +  -4.1  -3.40022   TCTGTCTTGATCGGA             GAGGCAC CGTG GTGTTTC              TTAATGTATTCATTG  50 154
LPH39_RS08220 2013335 .. 2013346 +  -5.8  -3.07344   TGTCAGTTGAAGATC                GGCA GTCG TGCC                 TATATTGGAAAATGC  53 41
LPH39_RS08225 2013739 .. 2013763 +  -3.6  -3.36327   CTTCGCTAAACGTGT         GATCTGCGG CGCACTAA CCGC-GATC          TTGTCGATACAGTCG  48 24
LPH39_RS08230 2017294 .. 2017309 +  -6.2  -3.84808   ATCAGATACAGGCAT              GCTTAT AACA ATAAGC               TTATTGTGCGTTGAG  64 513
        polA 2021089 .. 2021120 + -15.1  -4.50943   AAGTGTCCGCTCTCC      GGCCTCGCCGACC TTCCTT GGTCAGCGGGGCC       TTTTATCGATTCTTC 100 256
LPH39_RS08245 2022836 .. 2022849 +  -5.9  -3.08327   AATCTAGCGTTGGAC               CGGCC TCAG GGTCG                TGTTCGCACTTTCCT  53 135
        carA 2024429 .. 2024443 +  -4.2  -3.30124   CGAATTGCCCGATCA               GGTGAC TTG GTTGCC               TTCTGAGGCGTAACA  50 406
        carB NONE
        greA NONE
LPH39_RS08265 NONE
        recJ 2030911 .. 2030921 +  -6.8  -3.39844   CGGGCTTCTAACAGT                 CTCC AGT GGAG                 TGTTTGACCTGTACG  59 42
        prfB 2032745 .. 2032759 +  -5.6  -2.82491   CGATTTAAAACGGCA               CCTGAG TTT CTCTGG               TGTCATCCCTATCTC  49 139
        lysS 2034379 .. 2034390 +  -5.8   -2.5598   ACGACGATATCGTGT                GTCG GATT CGAC                 CTATTCTACCTATGT  50 67
LPH39_RS08285 NONE
LPH39_RS08290 2037899 .. 2037914 +    -4  -3.27653   GTCCACCCAGATCTC              GGTGAT GCGT ATCATC               TCTTGTAATGAGACT  48 161
LPH39_RS08300 2041766 .. 2041784 +  -7.4  -3.16071   CGGTCCCGTTGTAAC             CACGATCA TAT TGCTCGTG             TATCTTGCTGTACGG  60 50
        murL NONE
        murD 2044769 .. 2044780 +  -3.6  -3.28712   CACTGCTGAGCGATA                GCGG GTGG CTGC                 TTCTGAACCAGGGCA  48 217
LPH39_RS12045 NONE
LPH39_RS08320 2045409 .. 2045422 +  -5.3  -3.55563   CGATAAAGAGATGAC               TCAAC ACTG GTTGA                TTTAAACAATCAAGT  56 42
LPH39_RS08330 NONE
LPH39_RS08335 2049374 .. 2049393 +  -5.8  -3.71873   GTGTGAGGTCGTTTT            TAAGGTCT TTGT AGATCTTA             TTTGCCTGTGGATCA  61 250
LPH39_RS08350 NONE
         rng 2054563 .. 2054574 +  -5.8  -3.60948   TTGTCTAGGATGTCT                GCTC TGTT GAGC                 TTTCCCCGTGTGTTC  59 175
LPH39_RS08360 2058459 .. 2058472 +  -4.5  -3.72374   ATCGTGCTGATGCAA               CGCGA GTGC TTGCG                TGTTTCTTGATCCGC  57 115
        tldD 2060153 .. 2060168 +  -5.4   -4.2123   TGAGTGAGGTTTGCT              TGGCTA TCTA TAGCCG               TTTGTTGCATGAATG  66 218
        pmbA 2062590 .. 2062608 +  -2.3  -3.05384   GGATCTGTGCTGGAT             GGTGCCG TGTGT TGCCACC             TTCCCTGACGAGCAC  42 152
LPH39_RS08390 2063609 .. 2063624 +  -5.4   -3.0644   TCATTCACGCTTCAA              TGCTGA CTGA TCAGCG               TCTTGCGCATTGGCT  51 95
LPH39_RS08410 2067250 .. 2067260 +  -2.4  -3.29511   GCGCCGCTTTCAGCC                 CGTG TGA CCCG                 TTGTACCCCAATCCC  45 19
LPH39_RS08415 2067621 .. 2067641 +  -7.5  -2.71144   CCATGTTGGTTTCCG            GCCACGTTG CAG TGGCGTGGC            TGGTTGGCAACCCTG  56 53
LPH39_RS08420 NONE
LPH39_RS08425 2069819 .. 2069831 +  -5.5  -3.05046   GCGGTGCTCGGTGAG                CGTGA TTG TCGCG                GTTTTGGCGACATCG  51 410
LPH39_RS08430 2070502 .. 2070520 +  -5.8   -3.2794   CCAATGATCGGTGAG             CGGGCACG TGC CGCGACCG             TTCGTATCACTCCAC  57 34
LPH39_RS08435 2071727 .. 2071744 +  -3.3   -3.2327   TGGATGACCATGACG             GGTGCCG ATGA TGGAACC              TTGGTGCTCAATTGA  46 208
LPH39_RS08440 2072749 .. 2072765 +  -2.1  -4.31397   TGGGATGTGGAATGC              CGGCAGC GGC GCTTACG              TTATTTTCTGGCGGT  61 376
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW 2087124 .. 2087138 +  -4.2  -2.51966   GCAGCCAATGTTTGA               GGTGTG ACC CATGCC               ATTGATAAAGTTTAA  44 26
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC 2089300 .. 2089325 +  -2.5  -3.36273   GCTGAGCGGTCCTCT         CGTCGCGTC CGTGAGGT GAGGTGACG          TTAATGTTACAGCCA  45 2
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 2091860 .. 2091883 +  -2.4  -2.59971   TTTGAAAAGCTGATA          CTTGATTTGC TAAA GAGGATCAAG           GTTGCTCTCTCATAG  39 83
        rpsH NONE
        rplF NONE
        rplR 2093300 .. 2093321 +  -2.3  -4.35958   TGCGCGTGATGGGGG           GTTGAACTT CTAA AAGTTCAGG            TTGTTTCTTTAGTGG  61 13
        rpsE 2094005 .. 2094019 +  -2.8  -2.79098   ACGTGGTAAGAGCGT               TAGAGA GTT TCGCTA               TGATTGATGAATGCG  42 4
        rpmD NONE
        rplO 2094635 .. 2094647 +  -5.5  -4.09685   GGGTTTTGGTCGAAA                CTGCT GGT GGCAG                TTTTCAGGAGTAACA  64 0
        secY 2096088 .. 2096099 +  -3.6  -3.77912   TTTGTTGTTCTTGGC                GCTC CGAT GGGC                 CTTTTTTAGTTAATT  53 72
        rpsM NONE
        rpsK NONE
        rpsD 2097758 .. 2097770 +  -3.4  -4.15044   CGAAATAATTTACAT                TGGA AATCC TCCA                TTTGTTACAGGAGGG  60 33
        rpoA 2098800 .. 2098810 +  -2.6  -5.42131   ATATGGAATGCTTGG                 TTAA TAT TTAA                 TTTTTTCTGTAGTTC  80 22
        rplQ 2099810 .. 2099820 +  -3.2  -4.63592   AGAAAATCTTAATTA                 GGTT CGC GACC                 TTATTTTTCTTCCAG  66 423
LPH39_RS08640 NONE
LPH39_RS08645 2102863 .. 2102878 +  -3.4  -3.49048   CGATTTTAGAAAGAT              TTAATT CATG AATTAA               TATTGTTCATTAAAC  50 232
LPH39_RS08650 2105557 .. 2105569 +  -6.9  -3.18912   CATGTTGACTTTACT                GTGCC CAG GGCGC                TTCCTCAATCACTGG  57 248
LPH39_RS08665 2108855 .. 2108871 +  -5.9  -4.58663   GTGGTTGGGACAAGT              TTACGTT CCC AACGTGA              TTTTTAAACGATGGT  75 297
         tig 2114259 .. 2114271 +  -4.8  -3.39352   TTCCAGGAAGCGATC                CAGC AATAA GCTG                TTAGCTTTTGGATTA  52 17
        clpP 2115017 .. 2115036 +  -4.4  -3.46081   CTCGGGCAGCGCCCT            GAAGAGTTG ATC CAA-TCTTC            TTGATTAATTACATG  52 2
        clpX 2116520 .. 2116550 +  -5.3  -4.34444   GCTCTTGCAAGCTTA       CCCAAATGGCCTC ATAAC GGGGCCGTTGGCG       TTTCTGTTGTCTTAA  69 104
         lon 2119043 .. 2119065 +  -6.3  -3.99985   AAGGATCAAACAATG           CGCGTGTCA AGCAC TGATATGCG           TTATTTAAATGTGTG  68 9
LPH39_RS08700 2119554 .. 2119568 +  -2.7  -2.75064   ATGCCGTAAACTTCC               CCGCC GACTA GGGGG               TGCTTAGCTCAGCGG  42 15
LPH39_RS08705 NONE
LPH39_RS08710 2119809 .. 2119828 +  -3.6  -2.57132   AAAAGCAATAGTTTC            TTCCTGTT GTTA AAGAGGAA             CTTCTAAAGCGCGGA  42 87
LPH39_RS08715 2122073 .. 2122089 +  -3.6  -4.30791   GAATCACAATTGTAA              CGCAGT CGATA ACAGCG              TCTTTTTGTTTGGTT  60 26
LPH39_RS08720 2124232 .. 2124244 +  -2.7  -4.04206   GCCCCGCATGCACGC                TTGAA TGC TTCGA                TTTATCTGGCGCTAA  56 370
LPH39_RS08725 2129067 .. 2129079 +  -2.6  -2.57795   GGTGTTCAAGCTAAT                GGCG CTTGC CGTC                TGAATTCGTAGTACA  41 27
LPH39_RS08730 NONE
LPH39_RS08735 NONE
LPH39_RS08740 2130989 .. 2130999 +  -3.2  -3.56844   AGATGTGATCAGCGC                 TCGT TTT ACGG                 TATTTCATTACTCGA  50 40
LPH39_RS08750 2131938 .. 2131949 +  -4.4  -4.13767   TGGCTGAGCAAGCAT                CATG ACCG CATG                 TTTTGGACTGCACCG  60 99
LPH39_RS08755 2132204 .. 2132219 +  -4.6  -2.97902   ATACTCACCGCCATT              GGCCTC ATAC GAGGCG               TGTGTGCTGATGTTG  49 67
LPH39_RS08760 NONE
LPH39_RS08765 2134273 .. 2134284 +  -3.6  -4.10657   CCTGTGATGTGCATT                CCGT TGCT GCGG                 TTTTGACGGATGTGG  58 430
LPH39_RS08775 2135869 .. 2135882 +  -3.1  -3.42395   GGATGATTGCATGTC               GG-AGG TGA CCTGCC               TGTTTGACTGCTCAG  47 107
        rpmB NONE
        rpmG 2137561 .. 2137581 +  -4.7  -3.57651   GGGTTCGTTGTGTAC            TTGGTTCTG AGT CAGAACAGA            TTCTGTGATGTGGCC  55 135
         cls 2139379 .. 2139391 +  -6.9  -2.55668   CATGATGCTGACGAC                CTGCC TTG GGCGG                CTTCCTGTAGCGGTA  52 364
LPH39_RS08815 2143724 .. 2143779 +  -7.4  -3.12402   GCGGCCCAGGCGGGC GCGGTGGTCATCAGCGCCGCCAGGTGC CCG GCAT-TGAAGGCGCTGTGGGTTGCCGC TTCGGTGATGATTTC  60 373
LPH39_RS08830 2145535 .. 2145552 +  -2.7  -2.83345   TCCATCAATTGTATG             TAGCTAC GAAC GTAGATA              TAATTGCTGTATGAA  42 58
LPH39_RS08835 NONE
LPH39_RS08840 2146262 .. 2146281 + -11.4   -5.7946   GCGATTTCCCTCCAA            GCCCTGTG CACC CGCAGGGC             TTTTTTTATTGAGCA 100 169
LPH39_RS08845 NONE
LPH39_RS08850 NONE
LPH39_RS08855 NONE
LPH39_RS08860 NONE
LPH39_RS08865 NONE
LPH39_RS08870 NONE
LPH39_RS08875 2149301 .. 2149314 +  -2.3  -3.67775   GCATCGTCGCTGATT               CATGG TATG CCTTG                TTGTTGCATGCCGAT  50 28
LPH39_RS08880 2150106 .. 2150139 +  -3.1  -4.21631   CACTGCTGCACTTGT     TTTTGCGGACCGATT CTCT GATCGGTTTGCCGGA      TTTATTCAATACGTT  59 398
LPH39_RS08885 2151778 .. 2151791 +  -6.7   -3.4759   GCAGATCTTTGACGA               TGGTG TATT CACCA                TTGATTGTCATGACT  58 302
        typA NONE
LPH39_RS08905 2155969 .. 2155988 +  -5.8  -3.55946   TGTAGAGATAATCAA            GGGTATGAT GAA ATCA-ACCC            TGTTCTTTGGAGTGA  59 133
LPH39_RS08910 NONE
LPH39_RS08915 2157701 .. 2157720 +  -2.2  -2.67512   TAGTAATAATTGATT            TTTCAAAT AATA ATATGAAA             TGGGTTTGAATATAT  39 28
LPH39_RS08920 2158255 .. 2158266 +  -3.6  -3.97836   GATGAAAACTTCCTA                CTCC TGAT GGGG                 TTGCTTTTTATTATT  58 130
LPH39_RS08925 2158680 .. 2158696 +  -3.7  -3.74361   ATTTTAAAATTGGAG              CCGTTAT TTT ATAACAG              TTCTTGCTAAATCTG  53 71
LPH39_RS08930 NONE
LPH39_RS08935 2159770 .. 2159798 +  -3.8  -4.58698   TCTTTGGAATTTTGC        GGGGCTGTATTA AGAAC TGATGCCGCCTC        TTCTTTTTAATTTGA  68 255
LPH39_RS08940 2162513 .. 2162537 +  -8.7   -3.3514   AAGCGGCTCCTTGAC          TCGCTTGATTT ACA AAATCAGGTGA          TTGTGGCATGTCGAT  66 449
LPH39_RS08955 2169903 .. 2169957 + -15.3  -3.06492   ATCAGTTATCTTTAC GGTCATGACCAAGCTGCATCTCAATAT GTT GTATTGAGATGCAGCA-GGTC-TGCCC TCTTAAGATGCATGA 100 376
LPH39_RS08985 2180558 .. 2180570 +  -4.8  -2.76708   ACCTCGCTTTGGGGG                CAGC ATGGG GCTG                ATTGTATCTGGCTTG  47 72
LPH39_RS08990 2184828 .. 2184838 +  -5.4  -3.43689   GTGCGCGTCAATGAG                 CGAT GCC ATCG                 TGTTGTGTGTCTTTG  54 509
        prpB 2186646 .. 2186673 +  -7.6  -2.90075   CGCGTTGCTCCTGGA        GGCCGAGCACAC GTAT GTGTGCCTGCCC         TGTGATTGCCGGAAC  59 353
LPH39_RS09005 NONE
LPH39_RS12055 NONE
        acnD 2190179 .. 2190202 +  -7.4  -4.15044   CGTCTTGCTTGTTCT          GGTGGCCATG CCGG TGTGGCTACC           TTTGTTAGGGAGGAG  73 256
        prpF 2191592 .. 2191602 +  -3.2  -3.68302   GGTGTATTGCGGGGC                 CATC CTT GGTG                 TTGTTGGCGTGTTGG  53 105
LPH39_RS12060 2191926 .. 2191949 + -12.4  -2.90194   AGTCAGGCGCTAGAT          GACGTGGGTG GGCG CGCCCGCGTC           TGTGCTTGCAGCCAT  80 57
LPH39_RS09030 2195415 .. 2195425 +  -3.2  -3.76952   TCTCAGTGTGGCGCT                 GTAC GGT GTGC                 TTTCGGTTGCCTGGA  53 104
LPH39_RS09035 2200801 .. 2200846 +  -8.3  -2.66634   CTATCTGTGGGGATC TACCTGCGGCGGGCAGGA-AAG GGT CTTCTCTTGCTCGCTTCAGGCG TGCTGTGGTGGCGTG  61 215
LPH39_RS09055 2205650 .. 2205664 +  -4.2  -2.64616   CAAAATGCAAGCTTC               TCCCCA GGT TTGGGA               TGATGTCCATGCAGG  44 326
         orn 2211833 .. 2211845 +  -4.8  -3.40689   GGGCAACCTTTAGAA                GCAC TTCCT GTGC                CTTTTTCAAGTTGTC  52 516
LPH39_RS09090 2215844 .. 2215859 +  -5.4   -3.1582   CCGGATCGTTATTGC              CGGCAT GGTG ATGCTG               CTTTTGGTGCAGTGA  52 62
LPH39_RS09095 2216419 .. 2216436 +  -2.6  -2.80779   GCTGCTCTTGTGAAA             GCAGGC ATACTC GCCTCC              TCATCTTGCTGTTGA  42 52
LPH39_RS09100 2217051 .. 2217062 +  -4.4  -3.74526   TCAATCGGCGCGACA                GTGT ATCT ACAC                 TTCTTCAGTTGGTCG  55 128
LPH39_RS09120 2226612 .. 2226628 +  -6.5  -3.08467   GTAGTTCTCTTTGCA              GCGTTGC AAT GCAACGG              TCTGTCGTTTATCAG  55 256
LPH39_RS09125 2227378 .. 2227391 +  -9.5  -3.52073   GCTGTGAATGCATGT               GGCGC CTTT GCGCC                TTCTCATGTTGAGCG  74 34
        lipB 2228051 .. 2228061 +  -4.6  -2.95341   CTGGTTTTTTATGTG                 CGGT CTA GCCG                 ATTTGGTATTGCGAT  49 18
        lipA 2229112 .. 2229127 +  -8.2  -2.67477   CAATCGGATGCTACA              GCGCTC TAAC GGGCGC               TGATATCGCTTCATT  61 52
LPH39_RS09140 2230228 .. 2230240 +  -3.4  -4.10744   GGTGGATGCAATGCA                TGCT AAAGC AGCA                TTATTGTTTCGATGC  58 438
LPH39_RS09145 2231210 .. 2231222 +  -7.7  -2.80344   CAGATCAACGCGCAC                GCAAG TTA CTTGC                ATTATTGGGTGAGCA  59 369
LPH39_RS09150 2231428 .. 2231444 +  -5.1  -2.80493   CAGAGAACATGGACA              TCTTGGT CAG ACCAGGG              ATTGTCTCTTGCAAC  49 50
LPH39_RS09155 NONE
LPH39_RS09160 2232720 .. 2232733 +  -8.1  -3.90112   TGGTGATTGGGTCGT               CCTGG CTGG CCAGG                TTTGATTGAAGGAAA  70 141
LPH39_RS09175 2236588 .. 2236619 +  -5.8  -3.80461   ATGGTGCGCTGGTGT      TGTGTGTCACCTGC CTGT GTCGGTGACACGGA       TTTCCTGGTCCATTG  64 0
LPH39_RS09185 2239956 .. 2239983 + -15.6  -5.76633   CTTAGTTACCTGCGC        CGACGCCCCG TATGAGCC CGGGGCGTCG         TTTTTTTATGTCTCA 100 48
LPH39_RS09190 2241769 .. 2241781 +  -2.7  -3.65542   GTGTTGCTGATTTGA                TCTTT GGT GAAGA                TGTTTTGGGGATCGG  51 48
        kdsA 2243134 .. 2243145 +  -2.2   -4.3953   AAGATCAGACAGCAT                CAGC TGGG GTTG                 TTTGTTGTCCTTAAC  61 441
         eno 2244630 .. 2244651 +  -5.1  -2.72839   GCGATGCGTTCGTTT           CGCTCAAGT GCTG ATTTGTGCG            TAATTGGCGCTGGTT  48 12
        ftsB NONE
        ispD 2245692 .. 2245704 +  -2.7  -3.91144   GTTGTCACGACGTGT                TTGAG TGG CTTAA                TTTATGGAGTATCAA  54 22
        ispF 2246341 .. 2246354 +  -2.3  -3.89348   GCAAAGTGAAAGTGT               CGCTC TTGA GATCG                TTATTGTGTAGGGTT  52 140
LPH39_RS09235 2252014 .. 2252024 +  -6.8  -3.51411   GTTGACTTCGATGGT                 TGCC GTT GGCA                 TTCGTTTCCCAGCGT  58 457
LPH39_RS09260 2256794 .. 2256806 +  -3.5  -4.16371   TTTAATATAAAGCCA                TAAAA TTT TTTTA                TTTAATTATTTAGTG  60 98
LPH39_RS09265 2257244 .. 2257254 +  -2.6  -3.70919   GTGTTTATCTAGAGA                 TTTT CTA AAAA                 TTATTGAAATTTAGG  51 43
LPH39_RS09270 NONE
LPH39_RS09275 2257648 .. 2257680 +  -2.4  -2.56914   CTATCAAGGTTACAA     TAAAAAAT-AATAAA TCCG TTTGTTGATTTTTTA      TAAATTAATCAAGTC  39 16
LPH39_RS09280 NONE
LPH39_RS09285 NONE
LPH39_RS09290 2258838 .. 2258867 + -12.2  -3.13403   TTTAGCTTCGTTTAT       GCCCCTTCATAG TTAATT CTCTGAAGGGGC        TCTTGATAGCAGCAC  82 362
LPH39_RS09295 NONE
LPH39_RS09300 2259723 .. 2259749 +  -7.3  -2.74792   TTAAGTTTAATCTGT         GTGGGCACT ATGATTTTG GGTGCCCAC         CTTTAAAGGTGATGA  57 37
LPH39_RS09305 NONE
LPH39_RS09310 2260800 .. 2260810 +  -3.2  -3.60627   AGTGACGTAGGCATA                 GCAT GAT GTGC                 TTTCAGGTGGGATCG  50 415
LPH39_RS09315 2262687 .. 2262699 +  -6.3  -2.60496   TGCCATGGCGATTCC                GTATG ATC CATAC                ATGTTTCACGCAGGG  53 46
        mreD NONE
        mrdA NONE
        rodA 2267577 .. 2267593 +  -2.3  -3.02511   ACAATGCTAAGCATG              CAGAA CGAGTGT TTCTG              TATTGAAAAAGTCCG  42 107
        queA 2269047 .. 2269060 +  -4.5  -4.09923   TGGACAAGAGATGAT               GTGGT AGGA ACCGC                TTGTTTCATTGAATT  62 436
LPH39_RS09345 NONE
LPH39_RS09350 2273969 .. 2273981 +  -4.1  -4.10161   AAATTCATATGTTGA                GTAAG CCT CTTGC                TTTTAGCCAGTCGTA  60 488
LPH39_RS09385 2279072 .. 2279092 + -10.4  -5.03145   TTGATGTTGTTAGAA            CGTGCTGC TGAGT GCGGCACG            TTTTTTCAACCGTTC 100 60
LPH39_RS09390 2280366 .. 2280392 + -12.3  -3.63068   TCGCACATAAAAAAA         CGGCGGACC CGACGAGGC GGTCCGCCG         TTTGAGGTGCTGTAG  88 378
LPH39_RS09410 2286057 .. 2286072 +  -6.8  -3.61715   TGGCATGGCTGTCAG              TGCAGC ACGT GCTGCG               TTGTTGCAGAGCGTG  63 144
LPH39_RS09415 2287140 .. 2287162 + -12.8  -3.64103   TGGTATGAAAACTCA           GTGTTCAGCG CAT CGTTGAACAC           TTTCGACTCTGAATG  90 224
        pdxH NONE
LPH39_RS09440 2292108 .. 2292134 + -12.2  -2.87211   GTCAGTGGATTTGTG         TGGTGGTGCCGC TCA GCGGCCCTGCCA         TGTGTCACGCAGCGT  80 517
LPH39_RS09450 NONE
LPH39_RS09455 2296061 .. 2296082 +  -5.1  -2.70525   GAGGTCTGCCAAGAG           CGGTCATGG TTCG TCATGACAG            GTTAATTTCCGAACA  48 368
LPH39_RS09460 2297405 .. 2297416 +  -5.8   -4.8667   GTTCAGATGTGGCAA                CCTG TATT CAGG                 TTTTTGTGCCGTGTG  81 185
LPH39_RS09465 2297738 .. 2297751 +  -4.5  -3.18681   ATGCTGCTGGGTGTG               CGGCA AAGG TGTCG                TTGGTACGCTTCAGG  50 71
LPH39_RS09470 NONE
        cysT NONE
        cysW NONE
LPH39_RS09485 2302278 .. 2302291 +  -3.7  -4.72986   GGTTGATGGCCGTAT               CGGTG GCAA CTCCG                TTTTTGCTGGGGATG  69 291
LPH39_RS09520 NONE
LPH39_RS09525 2306402 .. 2306435 +  -5.9  -3.18681   GGACAGATCGCCGGT     CATCTGCACCTTGGG GGTG TCCAAGGTGACGCTG      TTGCTGGCCTTGAGG  55 161
LPH39_RS09580 NONE
LPH39_RS09585 2312622 .. 2312634 +  -9.1  -3.73402   GCAGCCTGATCCACG                CTGCG TAA CGCAG                TTTGCTCACACCTAT  74 32
LPH39_RS09595 NONE
LPH39_RS09600 NONE
LPH39_RS09605 2315385 .. 2315420 +  -5.2  -3.35813   GGCGTCGTCTGCAAA    GCACGTCCGGACTGAC GCGT GCCAAGCCGTGCGTGC     TTCGTTGACCTGAAA  54 11
LPH39_RS09610 NONE
LPH39_RS09615 2316634 .. 2316656 +  -6.2   -3.2794   TTACTAGATTAATCC           CGATGGCAAC CAA GGTGGCATCG           TTGCTATGAATGAAG  57 330
        rpoD 2320274 .. 2320284 +    -4   -3.6106   TTAGCTGTTCATTAG                 CATT ACA AATG                 TTTAGCGATGTTCCC  52 127
LPH39_RS09630 2321119 .. 2321129 +  -6.8  -3.26842   TTGCGCGTCTTGGGA                 GACG AGT CGTC                 TTGCTCGATTGTTTT  57 171
LPH39_RS09640 NONE
LPH39_RS09645 2327529 .. 2327541 +  -2.7  -4.20084   CCCTCCGCTTCTTCG                CATTT TTG AGATG                TTTTCCATGAGTGAT  59 17
LPH39_RS09650 NONE
LPH39_RS09655 2330780 .. 2330791 +  -7.2  -3.18239   CCACCTGCGGCATTG                CGGC TCCA GCCG                 TTGCTGAACTATCTG  60 504
LPH39_RS09670 NONE
        cyoE 2336564 .. 2336578 +  -4.4  -4.79955   GTTTTTCATTGTGCT               TTATTT TTA AAATAA               TTTTCTTGTGGCTGT  71 514
LPH39_RS09680 2338152 .. 2338166 +  -7.8  -3.12999   GAAGCACGGTCACGT               CGCGTT GGC AGCGCG               TTACATGTAGCGTGC  62 323
LPH39_RS09740 2350004 .. 2350026 +  -3.2  -2.78596   AACCAATTGCACGGC           GGTGTCGACG GCA CGACGGCGCA           TATCATCCACGAGTG  43 49
LPH39_RS09745 2350699 .. 2350718 +  -6.4  -2.73875   CGCCAGCGGCTGGGT            GAAACCCG ATGA CGGCTTTC             TGGTCTTGGACCGCA  53 145
        fabD 2358764 .. 2358777 +  -3.8  -3.42702   CCCCTTATTACTTTG               CTGC CGTTAT GCAG                TGTTATTCACTCATC  50 79
        fabG 2359608 .. 2359627 +  -3.4  -3.68325   GATTGTGATTATGCT            GCGGTGCA TGGT TCCCCCGC             TTCTATTACACTATA  53 83
        acpP 2360010 .. 2360027 + -14.1  -3.41738   TGCATCATCTGCATG             GGGCCGC TGCT GCGGCCC              TGTCTTTATTGCAAA  93 79
        fabF 2361382 .. 2361408 +  -8.6  -3.17941   CTTGCCAAGTGGGGA         GGGGAGCATCCC TGA GTGATGCGCCTC         TTAATAGGGTGTGCT  64 56
LPH39_RS09780 NONE
        mltG NONE
LPH39_RS09790 NONE
LPH39_RS09795 2365411 .. 2365427 +  -2.2  -3.15574   CAACTCGGATAAGTC              GACACA CACCA TGTGAC              TGTTACTGCGCTTGA  43 10
LPH39_RS09800 2365860 .. 2365883 +  -3.8  -3.70037   TGGATTCTGCTAGGT          CTCGGCTTCA CGTG TGGAGATGAG           TTTGCCTACTGGTTA  55 323
LPH39_RS09815 2371414 .. 2371431 +  -6.9   -3.3782   GATGGTGTCGTTGAC             GCCGTGC AGCA GGACGGC              TTGGTTGAGTAACTG  56 506
         efp 2372870 .. 2372883 +  -3.8  -3.24032   GGGAGTACGTCTCGC               GGGT GAAATA ACCC                TGTTCCTTGGCGGCT  48 15
LPH39_RS09830 NONE
        ubiG NONE
LPH39_RS09840 NONE
LPH39_RS09845 2376527 .. 2376547 +  -2.5  -3.05596   GTGGAGATTGAGGGG            GGATGGAAG TGA TTTCTTTCC            TTGCCTGCGGGAATG  42 30
LPH39_RS09850 2376697 .. 2376709 +  -6.9  -2.78216   CTGCTGTAGCTGGCA                CGGCG TGA CGCTG                TCATTGCTAAACCTG  54 32
LPH39_RS09890 2384824 .. 2384837 +  -2.3  -3.90112   GGCGGCGGCGGTCGA               GCGGT TGCA ACGGC                TTTGATTGGGAGGAC  52 7
LPH39_RS09895 2385786 .. 2385803 +  -5.5  -4.63218   AGTATTGGGCCATGG             CCGCG GCCTTGAG CGCGG              TTTTATTGACGCCGC  73 140
LPH39_RS09920 NONE
LPH39_RS09925 NONE
LPH39_RS09930 2391466 .. 2391488 +  -3.4  -3.93369   GTAAGCCTTACGTAT           TGGTGGATTC AAT GAATCTGCAA           TTTACTTCACATTGG  55 440
LPH39_RS09935 NONE
LPH39_RS09940 NONE
LPH39_RS09945 NONE
LPH39_RS09950 NONE
LPH39_RS09955 2399461 .. 2399477 +  -2.1  -3.36803   CCATATGGTGCGCTT              CCAGCAG TAC CCACTGG              TTGTGGGTGGGGTTG  45 231
         cmk 2404619 .. 2404639 +  -8.9  -3.92522   TGTTGTAGACAGGCT            CCGTTGCGC GAT GCGTGGCGG            TTTATCCACTTAAAC  76 121
        rpsA 2406458 .. 2406484 +  -3.7  -3.95747   TCGGCCTAGGTGTTC        TGCCTGG-ACCG ATTC CGGTGTCAAGCA         ATTTTTTGTCTTTTA  55 82
LPH39_RS09995 2406825 .. 2406850 +  -3.3  -3.34962   CTGAGTAACCAGTTC         TGATCGGTTAA GCTA TTGGCTGATCG          TTCTCGGATGTGACC  48 33
LPH39_RS10000 2407152 .. 2407176 +  -2.1   -3.0894   CTGCGTCCTACCGAT          GGATTGCATTG ATC CTATGGAATTC          TTGGATGAGTGGTTC  42 14
        lapB NONE
LPH39_RS10010 NONE
LPH39_RS10015 NONE
        galU 2412175 .. 2412203 + -10.4  -3.01924   CAAAGATGCCCAGCA        TACGTCGTCC TTATCTTCT GGACGACGTA        TCTTCAGGCGGCGTG  72 67
        folD NONE
        guaB 2414943 .. 2414954 +  -3.6  -5.14965   GATTTCCTATGTGTC                GCGT TGCT GCGC                 TTTTTTCCTGAGCAT  75 163
        guaA 2416728 .. 2416740 +  -4.8  -3.57144   ACCGTTTACTATTCG                GACC AAACC GGTC                TTTGCAGGTAAAACA  55 181
LPH39_RS10040 NONE
LPH39_RS10045 2417650 .. 2417672 +  -5.5  -2.92475   CCGCAGGTGGTTGAT           CTGTTGCGC CCGGC GCACGACAG           CTTTGTGGCGCTACA  51 98
LPH39_RS10050 2418243 .. 2418261 +  -3.7  -4.19817   CATGCTTGGCGTGAA             CCCGCTC GGGTA GGGCAGG             TTTTGCGTAGGTAGA  60 106
LPH39_RS10085 NONE
LPH39_RS10090 2425458 .. 2425473 +  -2.4  -3.14931   TTGCTAAGATGGCTG              CCGGGT TAAT GCCGGG               TTAATGCCGGATAAC  43 6
LPH39_RS10095 2426508 .. 2426527 +  -4.2  -4.32177   GTGGCTCGGCGTGGG            GGGCATGC ATGC GCATGGTC             TTTCTTATGGCATCA  65 112
        rplU NONE
        rpmA 2430639 .. 2430654 + -11.8  -4.77867   CATCACGGCTAAAGG              CCCCGC TATA GCGGGG               TTTTGTGTTCTCTAT 100 74
        obgE 2431990 .. 2432006 +  -2.9  -4.88067   CTGTCAACCGACTCT              TATGGCG GGC CGCTTTA              TTTTTATGAATCAAT  74 183
        murJ 2434038 .. 2434061 +  -4.4   -4.7629   GTGACGTATCACCAC          GCCCGGCCAT CCCC GTATCCGGGC           TTTTTGGATTGATCA  71 142
LPH39_RS10130 NONE
        ileS NONE
        lspA NONE
        ispH 2439829 .. 2439845 +  -7.9  -3.53012   CCAGGCGTTCGGGCT              GCCAGCG GTC CGATGGC              TTTGCAGGACAGACA  66 171
LPH39_RS10150 2439974 .. 2439996 +  -4.8  -5.07523   CATGATGTAGCGGAA          GGCCGT-CC ACTTAA GGTGCGGCC           TTTTGTTTGTCTCTC  80 39
LPH39_RS10170 2443518 .. 2443533 +    -9  -3.29471   TCACCACCATCTTGC              GACGCT CGTT AGCGTC               TTGCTCTCCTCAGGC  69 230
LPH39_RS10180 2444440 .. 2444454 +  -4.2  -3.67597   CACTACAGCGTCATT               CGCG CCATCCC CGCG               TTATTGCCTAACGCC  55 363
LPH39_RS10185 NONE
LPH39_RS10190 NONE
LPH39_RS12070 2445494 .. 2445520 +  -2.2  -3.01924   TTGCTATCTGGACAA         TCACGATGCC GAGGCAG GGCATGGTGC         TGTTGCCCACCGCTG  42 108
LPH39_RS10195 2445662 .. 2445680 +  -3.8  -3.37344   GTCGGATTATCCTTG             CGTCGG AAGGGGG CTGACG             TTCGTTCGATCAGAC  50 9
LPH39_RS10205 2446502 .. 2446512 +  -2.4   -3.9392   GACATGCCTGCTGGG                 GGGC TGC GCCA                 TTGTTTCGGATGACG  52 192
LPH39_RS10290 2469908 .. 2469922 +    -7  -4.65494   TGGAAGTACACGATG               CTCCCC CCT GGGGCG               TTTTCTATGTCATTT  80 41
        grxD 2472781 .. 2472794 +  -3.8  -4.26202   GTTGGGTGGACATGC               CAGG GATTTG CCTG                TTTGTTCGTGGCTCT  62 524
LPH39_RS10315 2476797 .. 2476810 +  -2.3  -2.57069   AGGAACGGCTGCGTA               GTAGG TAAA CCAAC                CCTTTCTTTCATCCA  39 39
LPH39_RS10320 2477923 .. 2477935 +  -3.3  -2.89081   CAAGAAACCTAAGGA                GGCCA TCA TGTCC                ATTATTGCTTCGCTC  43 29
LPH39_RS10325 NONE
LPH39_RS10330 2479285 .. 2479315 +  -7.6  -3.46647   GGCGCCAATGGCATT      GCGGAGAGCAGCG GAGTGA CG-TGATCTCCGC       TCTTTCGTGCCTGCG  66 60
LPH39_RS10340 2481121 .. 2481134 +  -3.7  -3.36135   TTCGTGATTGATAAC               GCGAC CTTG GCCGC                TTGATTAAACATTAT  48 8
LPH39_RS10345 2482198 .. 2482208 +  -2.4   -5.1101   TCCATAAGCATTGAT                 CAGC AGT GCGG                 TTTTTTCGATGCTGA  73 27
LPH39_RS10350 2482883 .. 2482900 + -11.3  -3.17685   TTGAAGTAGCGACTC             GCGTGGA TGCA TCCACGC              TTCCGTGTGTGCTTC  76 521
LPH39_RS10355 2483422 .. 2483447 +  -4.8  -3.53091   TGAGCTGCCACTGAC        GGCC-TCACGTC CAGT GA-GTGATGGCC         TTTCCAGAACGACAT  55 27
LPH39_RS10360 2484635 .. 2484675 +  -5.4  -3.04144   TCGGACGAAAGCGTA C-GATTGAGGCTGCGCGCA TGGC TGCACGCGGTTCCAATCCG  TGTTCGCGCTGCGCC  48 434
        queF 2493146 .. 2493158 +  -3.3  -3.85698   TGTGGATGTGGTGTT                TGGGC TTT GTCCG                TTTGTACGAGGCAGC  55 52
LPH39_RS12075 2494012 .. 2494039 +  -2.8  -2.52623   TGAGAGAATAGTATG        GTTAG-GACGATG ATG CATGGTTGCTAAC        GTCTTATACACGCGA  40 116
        leuC 2498325 .. 2498342 +  -2.7  -3.10493   AAATCAGCCGAATGG             TCGATCCA TAT TGGG-CGA             TATGTGTGTTGGCAG  45 118
        leuD 2499476 .. 2499491 +  -6.1  -2.91997   TGGCCAATATCGGTT              CCGAC GTTGTG GTCGG               TCGTTGTGTGTCGCA  52 319
        leuB 2501082 .. 2501092 +  -5.4  -3.47762   GACATATATTGCAAT                 CTGT TTC ACAG                 TCTTTAATCGATGTT  56 242
LPH39_RS10410 NONE
LPH39_RS10415 2503745 .. 2503764 +  -2.2  -3.69605   TTTCAGGGATTTAGT            TCTGATGCA CGG TG-GTCAGA            TTCGTTTTAAGTAAA  50 98
LPH39_RS10420 2505392 .. 2505404 +  -4.8  -3.14134   TCACGCATAGTTGGA                GCAG GGGAG CTGC                TATGTTAATGCGTAT  50 57
LPH39_RS10425 NONE
LPH39_RS10430 2508080 .. 2508091 +  -4.4  -3.57462   TGTGTTTGTTCTATT                GACA GTGA TGTC                 TTTGCCCGTGACCTG  52 343
LPH39_RS10435 2509552 .. 2509562 +  -3.2  -4.24786   TGCATGGAGCAGAAT                 CCGA GGG TTGG                 TTTATGTGTTGTCAG  60 226
LPH39_RS10440 NONE
LPH39_RS10445 2511498 .. 2511510 +  -2.7  -4.15106   GGTTCTTAATTCATC                CATTT TTA AGATG                TTTTGAAAATTCATA  59 32
LPH39_RS10450 2512825 .. 2512844 +  -7.2  -3.36569   TGTAGAAGTATGGAA            TCATGCAT CTTA ATGCATGG             TGTTTGGAGAATTAG  62 106
LPH39_RS10455 2514607 .. 2514618 +  -3.6  -3.83169   GCACTTGTGTATTTA                GTGC AGAA GCGC                 TTTGATGGCTTTGTA  55 254
        rlmD NONE
LPH39_RS10470 2517498 .. 2517518 + -11.9  -3.78436   CTGCTGCTGAGCAGC            GATGCCAAG AGA CTTGGCGTC            TTATTGGTGTGAATT  85 118
        nagZ 2518684 .. 2518694 +  -5.4  -2.52208   TTTATTTGAACGATT                 TGGA ACA TCCA                 CTTGATGCCTACTTT  48 10
LPH39_RS10480 NONE
LPH39_RS10485 NONE
LPH39_RS10490 2520396 .. 2520421 +  -7.5  -5.13527   ACGGCCAATGATTTT         GGCGACGTTCA GTGA TGGGCGTCGCA          TTTTATTTATTAGTT  88 116
LPH39_RS10495 2524362 .. 2524379 + -11.3  -5.77632   CTCAACACCACTGTG             GAGCCAC GTTT GTGGCTC              TTTTTTTGTGGTTTT 100 69
LPH39_RS10505 NONE
LPH39_RS10510 2526052 .. 2526070 +    -3  -4.24413   AGATCGACGGGGTAC             CAAGTAGC ATG GCGACCTG             TTGTTTGTTCATGCC  61 287
         fur 2526857 .. 2526869 +  -9.1   -3.6336   GGGATCGTCCCGCTC                CCAGC GGC GCTGG                TTATATCTCCTGTAA  74 148
        hrcA 2529694 .. 2529707 +  -3.1  -3.08173   GGCACGGCACTGGAG               C-CACC GAT GGTGCG               TTAGGTGAGGTTAAT  43 8
        grpE 2530434 .. 2530450 + -11.5  -2.83522   CACATTTGAACCAGA              CCCCGGC ACG GCTGGGG              ATTTGATGCAAAACT  76 109
        dnaK 2532422 .. 2532457 +    -9  -4.27686   TGAGGTGGAAGGACA    CTGCGAATGGGTGAGGC TAA GCTTTGCCC-TTCGCTG    TTTTCCCTGGTTTTG  80 52
        dnaJ 2533821 .. 2533831 +  -6.8  -4.72007   GACAGTTTCTAGCCC                 GTCG ACA CGAC                 TTTATTTTGGTCCCG  80 203
LPH39_RS10550 2535532 .. 2535544 +  -6.9  -3.53224   GAGGGTTTACACATT                CCGGC CAA GTCGG                TTTCCGAAGAGCGTC  61 488
LPH39_RS10555 2537384 .. 2537409 +  -3.2  -3.45788   TGTGGCAGAATCGTT         GCGTTCCG TGGGCATGTT CGGGGCGC          TGTTCTGTTATGCCA  50 269
LPH39_RS10560 2537838 .. 2537848 +  -3.2  -3.55447   TTTTTAATACCTTTG                 CTTG CGG CAGG                 TTATCTGATGGATGG  50 34
         lgt NONE
LPH39_RS10570 2539596 .. 2539611 +    -4  -3.00918   ATCCGGCCATCAAGG              CAC-CTG TGG CAGTGTG              ATTTATGGTGTCAGT  47 9
LPH39_RS10575 2540627 .. 2540645 +  -5.2  -3.36452   GTGCTGAATAAGTAG             CTGTGGAA CGA TGCCGCAG             TTGGTATTAGGGACT  54 217
LPH39_RS10680 2568764 .. 2568774 +  -2.4  -4.08394   GCAATGCTTTAACAG                 GACG TGA CGGC                 TTTTGGAAGAGGTAT  55 56
LPH39_RS10690 2573284 .. 2573295 +  -5.8  -3.03124   CAGCAGGATTGAGTC                CCCT GGAT AGGG                 TATTGGGAGCTGGGC  53 120
        apbC 2582132 .. 2582144 + -10.5  -2.55213   CAATCCGGCACACAG                GGCCG CTG CGGCC                TGGCTTAGATGCGTA  64 498
LPH39_RS10735 2585299 .. 2585312 +  -2.3  -3.54424   CGAAATGGGTTGTAG               AACGC TGAA GCGTA                TTTGGCGGAATAGGC  48 337
LPH39_RS10745 2587153 .. 2587169 +    -5    -3.767   GTTTTGATGGAGACT              GCCCCG TGTGT CGTGGC              TTTGGTGGATGCGTG  57 89
        pcaD 2588322 .. 2588336 +  -4.2  -3.68244   GCACGGGTACCGCGA               TCGAAC GCA GTCCGA               TTTCCCATTCCTGAT  55 255
LPH39_RS10770 2593538 .. 2593551 +  -4.5  -2.92789   GGCCGCGTGGTGAGT               CCGCA GCGA TGTGG                TGTGGTATTGCGTGT  49 28
LPH39_RS10775 2594708 .. 2594735 +   -10   -3.1585   TAGCCCCACAGGTAT        TTTCGGACATTT CAGA AAATGACCGAAA         TGTTCAGTTGGATCA  70 445
LPH39_RS10800 2599800 .. 2599816 +  -5.1  -3.48027   GAATGTGTAGGTGCA              CTGGCTG TAC TAGTCAG              ATTTTCTTCCTTATG  56 126
       folE2 NONE
LPH39_RS10810 2601443 .. 2601456 +  -4.5  -2.71791   AAATGCAAAAATTTC               TACCG TAGG CGGTG                CTTTGGGGAACAACT  46 88
LPH39_RS10825 NONE
LPH39_RS10830 NONE
LPH39_RS10835 2614296 .. 2614308 +  -6.9  -3.41839   AACGCTGTACGGGTT                CCTGC AAA GCGGG                TTCTGGATGTATCTG  59 427
LPH39_RS10845 2616129 .. 2616162 +  -5.3  -3.38046   GACTGAAGACAAGGC     TGTTTCCCAATAG-GC TGG GCTCTGTTGGGGACCG     TATTTAAAATGACAC  54 192
LPH39_RS10865 2621592 .. 2621606 +  -4.2  -3.62224   CATCAGGCAGTGCAG               CTCTTC AAC GATGAG               TTGTTGCCCAACTGT  55 412
LPH39_RS10870 NONE
LPH39_RS10875 2623062 .. 2623081 +  -7.2  -4.26076   GGAGAGGATGAGTTT            CATCGAGCA CAT TGC-CGATG            TTTTCATGGAGATGA  73 500
LPH39_RS10880 2625343 .. 2625366 +  -5.3  -2.93901   ATCTCTTGCGTCTGT          CGTTGCAGT CGGCGC ACTGCGATG           TATCCTTGGTGGAGT  51 377
LPH39_RS10885 2626411 .. 2626427 +  -2.9  -2.72881   ATCGGTAGTGGGAAC              TTGCCTA GCA TGGGCAC              CTGTTTGCTTGGATC  41 500
LPH39_RS10920 NONE
LPH39_RS10925 2632006 .. 2632026 + -11.1  -2.59683   GATGTCCTCGTTAGC            GTCACCGCC TCC GGCGCTGAC            CTTGTGCAATCCAGT  67 288
LPH39_RS10935 2633213 .. 2633223 +  -3.2  -3.73107   TGGTGCAGATGTATT                 GCAT GGC GTGC                 TTTAACCTTTGATAG  53 267
LPH39_RS10945 2635679 .. 2635692 +  -4.5  -4.54205   AGCGATTTTGAGGAG               TGTCG CTGA CGGCA                TTTCTTTCGTCTGAT  71 82
LPH39_RS10950 2638288 .. 2638304 + -10.9  -2.90496   CACAGCATGGGGCAT              CGCTTTC AGA GAAAGCG              TGATTTGAGAACCCA  74 162
        sufT 2639498 .. 2639513 +  -2.6  -2.63476   GCGTTAATGCGTTCC              CCT-TTG CTT CAACAGG              AATTTTTGCGTGCCT  41 59
LPH39_RS10965 2640764 .. 2640779 +    -9   -2.8371   AATCGCACGCTGATC              CCTGCT GTTA AGCAGG               CTTTGGGTGGTTGTT  60 178
LPH39_RS10995 2644176 .. 2644187 +  -4.4  -4.67608   TCCAAATACCACTGA                TCGT ATCT ACGA                 TTTTCTATTGCCATA  71 189
LPH39_RS11000 2645495 .. 2645509 +  -5.6  -2.94416   GGCGTTGCGTGAGGT               GAGCGC GCA GCGGTC               TCTATAATGCCGGTG  51 4
LPH39_RS11005 NONE
LPH39_RS11010 2647587 .. 2647597 +  -6.8  -3.60151   TGCGGTCAATGCGCA                 GCCA CAG TGGC                 TTGTACTTTGGCAGA  61 162
LPH39_RS11025 2652842 .. 2652854 + -10.5  -3.70863   TGAGCCAGTTTGCAG                GGCCC TTC GGGCC                TTTGCATCCTGTCTG  79 140
LPH39_RS11030 2654738 .. 2654777 +   -21  -3.54984   CTAGTCTCTAAAGCT  TAAGAGTCGTCACCTGTA TATA TACAGGTGACGACTCTGA   TTGGTATTTCTTGCT 100 518
LPH39_RS11070 NONE
LPH39_RS11075 2660637 .. 2660660 +  -8.2  -2.71712   GCGGTTCTGGATTCC          GAATCAGCAA TGTC TTGCCGATTC           CTTTCCACCACCCCG  56 241
LPH39_RS11085 NONE
LPH39_RS11090 NONE
LPH39_RS11095 2663695 .. 2663707 +  -3.3  -2.71712   AATAGCTGGGCGTAA                TCCCT ATC AGGGC                CTTTGCAACACCGAA  42 26
LPH39_RS11100 2663971 .. 2663983 +  -4.1  -3.40611   GCCCTAATTTTGCGG                CCTTG GAC TAAGG                TGTTGTTACGATGCG  50 15
LPH39_RS11105 2665215 .. 2665245 +  -7.5  -3.37622   TAGCCACGGTCACGG       CGCGGCTTTGCCA AGTTG TAGCAAGGACGCG       TTATCGATACGTATT  62 185
LPH39_RS11115 NONE
        rnhA NONE
        dnaQ 2667973 .. 2667989 +    -8  -2.75712   TGATTGGAGATATGA              CTTGGC CATTA GCCAAG              TACTTCCATGAGTGA  59 68
LPH39_RS11135 2669123 .. 2669138 +  -3.2  -3.06671   GTATATCGCTTACAG              TAGGCA ACGG TGCCGA               TATTAGCGTGGCTCT  45 238
LPH39_RS11140 2671427 .. 2671437 +  -5.4  -2.75498   GTAGTGGTGCCTGAG                 TCTG CGC CAGA                 ATTGTGTCTGCGGTC  47 402
LPH39_RS11150 2672949 .. 2672972 +  -3.8  -5.12068   TAGTGCTTACTGATA          GCTACCTTCA AGCA TGAAGGTCCC           TTTTTATTCAATCTG  77 83
        mdoH 2675359 .. 2675373 +    -5  -2.83082   CTTCGCCGCGTTAGG               CAAGCA TAA TGTTTG               GTTCTCTCTGTTTGG  47 17
LPH39_RS11160 2676086 .. 2676096 +  -5.4  -3.03007   AGCTGCTCCTGTGCC                 GCAA TCA TTGC                 TGTTGCGCCCGTCTT  51 40
LPH39_RS11165 NONE
LPH39_RS11170 NONE
        hemC 2679043 .. 2679059 +  -2.3  -4.21194   CTTCGACTAGCAAAT              TATTGAT TAG ATCAGTG              TTTTCGCTGATGCGG  60 248
LPH39_RS11205 NONE
LPH39_RS11210 2688586 .. 2688622 +  -3.8  -4.07687   ACGGTGACGTGAGAT    GTGATTTTCCAAAGGT CTCTT ACCATTCGAAAATGAC    TTTTGCGGAAAACGT  60 478
LPH39_RS11230 NONE
LPH39_RS11235 2695325 .. 2695362 +  -2.1  -4.19704   TTGCTTCTTCATATG   TGATTGTTGGTCGATCTA AGT TGGATTGATCGACGG-CA   TTTTAAGTCGGGTTA  57 363
LPH39_RS11245 2699949 .. 2699967 +  -2.4  -3.80862   GTGCATCTTGCTATT             CAAGATGA AAG TCAATTTG             TTTAGTAGTAGCTTT  52 326
LPH39_RS11250 2700322 .. 2700341 +  -7.2  -3.44274   CTTGTTCGTAGCGTA            CGTACGGTA CCG TACCGT-CG            TTACTGTTCTCATTG  62 238
        mtgA 2703238 .. 2703254 +  -6.6  -3.20349   TGGAGGTGCTTTGAT              CAACGA GTAAA TCGTTG              TATTGGCTTTGCCAG  57 282
        mutS 2706792 .. 2706822 +    -9  -4.56702   ACAGTGCATGCACGA       AACGGATAACCTCT TCG GGAGGTAATCCGTA       TTTGTTTGCTTCGCC  83 383
LPH39_RS11280 NONE
LPH39_RS11285 2708558 .. 2708581 +    -6  -2.77701   ATAGCTGCGTTCCAT          CAGTCTGCACA AAT TGAGC-GACTG          TGATCTTCATAAGCT  52 341
        birA NONE
LPH39_RS11295 2710605 .. 2710618 +  -3.1  -3.63336   AGCGATCTGGGCGGC               CGTTG CGGC TAACG                TTTAGAATCGTCTCT  51 7
LPH39_RS11300 2711264 .. 2711276 +  -6.3   -2.6989   ACGTTACGCTAGAAG                CGTAT CGC ATACG                TCCGTTTGGTACTTT  53 29
LPH39_RS11305 2711582 .. 2711601 +   -10  -3.04144   GGTTCTGTGGAGGTT            CCACGAGG GGCA CTTCGTGG             TCTTAGCGCTCGCGC  69 114
LPH39_RS11310 NONE
LPH39_RS11315 NONE
LPH39_RS11320 2713778 .. 2713788 +  -5.4  -4.27467   TAAGAATGATCCAGC                 TAGC GTC GCTA                 TTTCTGTTGGTATTC  66 69
LPH39_RS11325 2714609 .. 2714627 +  -3.8  -3.61398   GAACACGGATCAGCG             GAGGGTAT AAC AAACTCTC             TTGTTACCACAGCCA  52 56
LPH39_RS11345 2716630 .. 2716643 +  -9.5  -5.79595   TATTGAAAGCACAGA               CCGCC TTTG GGCGG                TTTTTTGTTTTGAGG 100 223
LPH39_RS11350 2717139 .. 2717151 +  -9.1  -3.54459   GGCATGTAGGGATAA                GGCCA CAC TGGCC                TTTGGAAGCCATTCA  71 48
LPH39_RS11365 2718647 .. 2718661 +  -5.6   -2.7555   GCGCGCCCCTATCGG               GATGCG CAC CGCACC               TAGTGTTGCGGTGTA  49 8
LPH39_RS11370 NONE
LPH39_RS11375 NONE
LPH39_RS11380 2720508 .. 2720550 +  -2.8  -4.61566   GAGTGACTTTAAAAT GCCACGTGTTGCCGTCA CCATCTTCAA TGATGGC-ATGTGTGGC TTTTATCCTTTCCCC  65 203
LPH39_RS11400 2722295 .. 2722310 +  -7.6  -3.21416   TGCAGGACATTAATT              GAGCAT TGAC ATGCTC               TTGATAATACGAGTG  62 17
LPH39_RS11405 2722737 .. 2722747 +  -5.4  -2.73085   GCGGGAGGCTATGTG                 TCTG TCT CAGA                 ATATTCTTTCCACTG  48 246
LPH39_RS11410 NONE
LPH39_RS11415 NONE
LPH39_RS11420 NONE
LPH39_RS11425 2724899 .. 2724924 + -12.6  -2.71924   TCTCTTTCATGTGGA         CGGGGTGTCT TTGTAC AGGCACCCCG          ATTTAAGGAGGCATG  81 54
LPH39_RS11430 NONE
LPH39_RS11435 NONE
LPH39_RS11440 2727885 .. 2727932 +  -2.6  -4.13973   CAGGGCACGGTCAGG GGGTGTTGCCTTGACTGCTCAT GATG GTGAGTGGTCATGGTAGCCTGC TTCTTTCTGATGTCT  59 12
LPH39_RS11455 2729866 .. 2729885 +  -2.8  -3.51411   TAGGCTAGGTGTCCA            GCGCGTGAT GTT GTCGCG-GC            TTCGTTTACGGCGGT  48 203
LPH39_RS11500 NONE
LPH39_RS11505 2737152 .. 2737179 + -14.4   -3.0127   CCTCCATAGTGCGTA        TACTGACAAAGT ATAT ACTTTGTCAGTA         TGTATGGTTCGATAG  90 469
LPH39_RS11515 NONE
LPH39_RS11520 2738804 .. 2738820 +  -4.3  -3.71552   ATCACCTCGCGTCGT              CAGCTCC TTT GGTGTTG              TTCTCTTGCTGAACT  55 377
LPH39_RS11535 NONE
LPH39_RS11540 2746032 .. 2746046 +  -2.1  -4.56775   GGATAAAGCGTTGGA               CTTGG TACAC CTAAG               TTTTTAGCGACCGGT  63 112
LPH39_RS11560 2749762 .. 2749795 +  -5.3  -3.28261   GTTGCCGGACCTGTG     GCAGGGCGAG-TGAAC CTG GTTTGGCTTCCCCTGC     TTGCTATCGAGTTAT  54 13
LPH39_RS11565 NONE
        secB NONE
LPH39_RS11575 2752059 .. 2752085 +  -7.3  -3.16191   GCCTAAATAAAAAAA        GAAG-CCCGATC CTTG GATCGGGGCCTC         TTCCTCAAAATGTGG  60 90
LPH39_RS11585 2754062 .. 2754083 +  -6.5   -3.5002   CCTGCTGAGAAGCGG           TGTAGGCCG CTTG CCGCCTGCA            TTCGTTGTACTTCAC  61 403
LPH39_RS11590 2754727 .. 2754744 +  -6.9  -3.65902   CCATGTAGGTGAAGG             CCTGGTG AGCG CCCCAGG              TTTACCTGGAATGAC  63 181
        dnaX NONE
LPH39_RS11610 2759050 .. 2759061 +    -3  -3.90856   GTATCGTAGACACGT                TATG CATA CATA                 TTTGCTTGAGCAATT  54 210
        recR 2759694 .. 2759706 +  -3.3   -4.0827   CTGACCCGCTAAGCT                TGGTG TAT CCCCA                TTTCTGTGAGTGTGT  58 72
LPH39_RS11620 2760085 .. 2760111 +  -9.5  -2.54896   GCTATTTGAAATATG        CGCCGCCGCTTGA CGG TCA-GCGGCG-CG        TGCCTTACCTACAGA  66 42
LPH39_RS11645 2766822 .. 2766850 +  -3.9  -3.05647   TATCAATGGCTAGCG        CCAGGATTGTT CTGATTT GACAATACTGG        TCTCTATCCTTAGGA  47 479
LPH39_RS11650 NONE
        rpmF 2767732 .. 2767753 +  -9.4  -5.22039   GCATGTGCTTTGGAA           GTCGCGTC TGTCCC GACGCGGC            TTTTTTAAATTTAGG 100 78
LPH39_RS11660 2769016 .. 2769028 +  -6.3  -2.72829   TGTTGTTGCGTAATG                CAACA CGT TGTTG                ATTTACCAACGTGTC  53 290
LPH39_RS11745 2793904 .. 2793945 +  -2.2  -2.73994   CTCGACTGGTGAGGT TGTGTTCGGAAACGGCGGC ATGAA GGCGTTG-TTCCGAGCCCG TCGTATTGGCAAGGT  39 3
        ubiB 2795799 .. 2795827 +  -5.3  -2.53903   TCATCCCTGTAACCC        TGGCAAAGAAATC GTA GATTCCTTGGTCA        CTCATTTTTCGCGCA  46 243
LPH39_RS11780 2801960 .. 2801973 +  -4.5  -2.98356   TTAGTTGATCTAGTT               GTGCT TTCA GGCAC                TATCTCAATTTACAT  49 42
LPH39_RS11785 2803146 .. 2803164 +  -3.7  -3.71527   CTTCCAACCAGTTTT             CGTGGCG TATCT CACCGCG             TTTGAATAATTCCAG  55 452
        glnA 2805393 .. 2805423 + -11.9  -3.78026   GCAATTCCAGTGGCA       GCGATGGTGGGTA CTTCC TTTCCACCATCGC       TATTTTCCATTTCAC  85 41
LPH39_RS11800 NONE
         amt 2807461 .. 2807475 +  -6.4  -3.14344   GTCAGCGTATGACTC               CTGAGC GTG GTTCAG               TTCATAGACCCGATA  57 22
LPH39_RS11815 NONE
LPH39_RS11840 2815396 .. 2815420 +  -5.8   -2.8055   TTCCGTCTTCCGGAA         CCCA-GTTCAT TTGT ATGAGCCTGGG          TCATATTCTGGAATG  52 8
LPH39_RS11845 2816542 .. 2816569 +  -7.2  -4.32857   CATTAAACCGGTTAT        TCATCATTC-ATG AAT CATTGAGTGATGA        TTTATATTTCAGAAG  76 35
LPH39_RS11865 NONE
LPH39_RS11870 2818267 .. 2818277 +  -3.2  -4.01646   GAGGAATCTCTTTCC                 GTAG CGG CTGC                 TTAGTTTTTTATATG  58 11
LPH39_RS11875 NONE
LPH39_RS11880 2818921 .. 2818965 +  -2.5  -2.87581   CCACTGTCAATGAGA TGTGCACACGGTGCCGTAGGC AAT GTCCACGGATACGTGAGCCCG TGATCTTTCCGTTGA  40 153
LPH39_RS11885 2819646 .. 2819686 +  -3.9  -2.52464   CTGTGGGTACTCAAG  CGGTTCTTCCTTGTCTCCT GCT GGGGGGTAAGGGGGGATCA  TAGCTTGACCCCACA  44 94
LPH39_RS11890 2820168 .. 2820184 +  -4.3  -3.26545   TCTAAGGTGGCGTAG              TGATGCC TGT GGCAACG              TTGCTGGTGTCTGCG  48 26
LPH39_RS11895 NONE
LPH39_RS11900 2820646 .. 2820668 +  -9.1  -5.03314   TATTTTGATGTGTTT           GGGGTGTCT TGGTC GGGCACCCC           TTTTTTCGAGGTGGG 100 50
LPH39_RS11905 NONE
LPH39_RS11910 2822539 .. 2822550 +  -3.6  -3.08015   GGTTTCTTGACAGGG                GGCG TGTA TGCC                 TATTCACGTGATTAC  45 31
LPH39_RS11915 2823701 .. 2823721 +  -2.5  -3.43773   AGAATTTGATGATAG            TCGCAGC GACCGCA GCTCCGA            TATTTACATATACAA  45 53
LPH39_RS11920 NONE
LPH39_RS11925 2824658 .. 2824686 +  -2.4  -5.09426   GGCAGGGCCGCCTTG       TAATGGAAC-CGC TCGT GCGTGCTCCATCA        TTTTTTGCCATTCCC  75 235
LPH39_RS11930 NONE
LPH39_RS11860 2817234 .. 2817264 - -11.2  -2.82516   TCTTCGATGACTACA       GCCATGCTAGCG ATGCTGG CGTTAGCATGGC       TTTAACGTTATTCAG  74 58
LPH39_RS11855 NONE
LPH39_RS11850 2816369 .. 2816382 -  -3.1  -3.01712   GTCGTTGTTTCAATA               CCGAT GGTT ATCAG                ATTGATATGAGTGCG  42 221
LPH39_RS11835 2813086 .. 2813122 - -14.6  -3.66424   TAAAATCAGGTTAAA   CACCGACGCAGCCGATA ACAT TATCGACCGCGT-GGTG    ATTGTATAGCTGATT  95 103
        nadA NONE
LPH39_RS11825 2809963 .. 2809981 -  -3.1   -2.9732   GTGGAAGGGAAACGA             GGTTCAT GTCAG AAGAACC             TTATCTTTTGAAACA  43 10
        nadC 2808927 .. 2808944 -  -3.3  -3.54424   GCTGATGGGTTTAAA             CGCACGC GATG GCCTACG              TATGACAGGCCGCCT  50 181
LPH39_RS11790 2802880 .. 2802938 -  -2.6  -3.90729   AAGAAGGGGTAGAAA CTCCAGTCACATTGGCGCCT-TCCGGTCT AGGA AACCCGGTCAGGCGCCAAT-CAA-TGAAG TTAATGCGCCAGTAC  54 75
LPH39_RS11775 NONE
LPH39_RS11770 2799396 .. 2799406 -    -4   -2.7185   AGGAGGCGTGAATGA                 TTCA TGG TGAA                 GCTCCCATTCTTGCA  44 16
LPH39_RS11765 2798611 .. 2798625 -  -6.4  -3.38768   TCATATCATCCAGAA               CCTAGC TAA GCTAGA               GGCAGGGATTGCCGT  59 246
LPH39_RS11760 2796529 .. 2796543 -  -4.3  -3.40403   CTTGGCGGATTACAA               TTCGA TCACG TCGAA               AGCAACTTCCGGATT  50 5
LPH39_RS11755 NONE
        purU 2791435 .. 2791447 -  -3.3  -2.97475   GTTTTCATCAGAAAT                GCCCC TAG GAGAC                GGACGGCGGAATATC  45 85
LPH39_RS11735 2790824 .. 2790842 -  -7.4  -2.74192   CACTTTTCAACACGA             TCATCGGC ACG GCCCATGA             GGACGATTCGGTGGC  56 209
LPH39_RS11730 2789172 .. 2789195 -  -7.5  -2.62184   CTCGGCCTCAGATTA          GCGATTG-CG ACACG CGACAATCGC          TTTAGGGATGCACCA  56 58
LPH39_RS11725 NONE
        zapE 2786693 .. 2786708 -  -2.5  -3.30507   AGGAACTGAAACACA              GTACC CACTTT GGCAC               ATTACTGAAAGGAAC  45 327
LPH39_RS11715 2785906 .. 2785923 -  -9.1  -2.88579   CTAACCTGCGATATA             CCAGCAC CATT GCGCTGG              TGTCTGGATTGAACT  65 179
LPH39_RS11710 NONE
LPH39_RS11705 2781232 .. 2781257 -  -9.8  -3.14132   CCTGGTTTCGACGAA         CATCGGCATC TTTAGG GATACCGATG          CTGGATGGCCGGTTG  70 290
        ilvC NONE
        ilvG NONE
LPH39_RS11690 2777288 .. 2777304 -  -4.4  -2.88887   TGCAAAGAAAATCTA             GCG-GCA GTAT TGCGCGC              GGTATAGCACTTAGT  45 51
LPH39_RS11685 NONE
LPH39_RS11680 2774105 .. 2774117 -  -5.5  -3.16742   TGCAATGTTTAGCAA                TCCCG AAT CAGGA                CAGCTTCGCTAAACT  52 454
LPH39_RS11675 2771177 .. 2771200 -  -9.5   -4.3129   CAGGGATTACGAAAA          GCGGGGCCT TGGTTT AGGCCCCTC           CCACAAACGTCGCAT  85 113
LPH39_RS11670 2770188 .. 2770204 -  -7.9  -2.78384   CGCGTTCGGACGACA              GGCCACT CAA AGAGGCC              ATAATGGAAGTGGTT  59 108
LPH39_RS11665 2768558 .. 2768568 -  -2.4  -2.55544   GTATTATCGAAGCTA                 CCGC AAG GCGT                 TTAGATATGTCGATG  38 453
LPH39_RS11640 NONE
LPH39_RS11635 NONE
LPH39_RS11630 NONE
LPH39_RS11625 2760084 .. 2760110 - -10.1  -2.62613   TGCTATTTGAAATAT         GCGCCGCCG CTTGACGGT CAGCGGCGC         GTGCCTTACCTACAG  69 52
LPH39_RS11600 2756365 .. 2756384 - -10.7  -5.25699   ATTAGATAATAAAAA            GGCCACC TCGACG GGTGGCC             TTCTTGCAACATGTT 100 48
LPH39_RS11595 2755386 .. 2755396 -    -4  -3.39449   TCGCAGCAAGACGAA                 CTTT CGG AAAG                 GGGGGGGCGCTGGAA  50 405
LPH39_RS11580 2752059 .. 2752085 -  -9.5  -5.95539   GCCTAAATAAAAAAA        GAAG-CCCGATC CTTG GATCGGGGCCTC         TTCCTCAAAATGTGG 100 85
LPH39_RS11555 NONE
LPH39_RS11550 NONE
LPH39_RS11545 NONE
LPH39_RS11530 NONE
LPH39_RS11525 2739753 .. 2739765 -  -3.3  -3.62255   GGCAAGAAGAAGTAA                TGTCG AAT CGGCA                TAGATGCGTTTCAGG  53 404
LPH39_RS11510 2736576 .. 2736593 -  -2.7  -3.66095   AAAGGCGCAGCTAAA             CGGTA CGCACCTT TACCG              CACGCTGTCTGCTAA  50 283
LPH39_RS11495 NONE
LPH39_RS11490 NONE
LPH39_RS11485 NONE
LPH39_RS11480 2731278 .. 2731305 -  -5.4  -5.40072   CCCCCCTGAAAAAAA        TCTCCGCGCCGC TCCG ACAGCGCCGTGA         CACTTGAAAATCATC  87 39
LPH39_RS11475 NONE
LPH39_RS11470 NONE
LPH39_RS11465 NONE
LPH39_RS11460 2729238 .. 2729251 -  -2.3  -3.09933   GGCCAATGTACTCAA               GTTGC ATTG GCATC                AGGTAGATATTGTTC  42 475
LPH39_RS11450 NONE
LPH39_RS11445 2727650 .. 2727661 -  -5.8  -2.70932   TCTGGCGGTGAAGGA                CTGG ATGC CCAG                 GGGGTGTTTAAGGGG  48 267
LPH39_RS11395 2721451 .. 2721461 -    -4  -4.17048   GCCTCCTGAAAATAA                 TTAG CTG CTAA                 ACGCTTATTTTTCCT  62 22
LPH39_RS11390 NONE
LPH39_RS11385 2720618 .. 2720632 -  -4.3  -3.60475   AATAAACGGTCCAAA               TTTCG GCGCA CGAAA               CTGTTTTCTTCTACG  52 75
LPH39_RS11360 NONE
LPH39_RS11355 2716938 .. 2716953 - -11.8  -2.62616   CGATGCCGGACATGA              GCGGCG ATGC CGCCGC               CGCCGGGGCCAAAGG  70 236
LPH39_RS11275 2706396 .. 2706408 -  -5.5  -4.19746   TTGACGCCAAAACAA                GCACT GGA AGCGC                TTTACCGGCTCAAAG  67 98
LPH39_RS11260 2701245 .. 2701257 -  -4.9  -3.39288   GATTGTTTAACAAGA                TGAAA TCC TTTCA                GATAGTGATAATCAT  52 40
LPH39_RS11255 2700093 .. 2700103 -  -2.4  -3.53012   GGTTGTGGGTTCAAA                 TCCC GCC GGGG                 CCACCAAACTTTTAG  47 221
        mprF 2695920 .. 2695943 -  -3.2  -2.83271   TCAGGGCGATAATGA          CTTTTCATAA ATCT CTAGGAAAAG           GTTTGTTATCCTCTA  43 175
LPH39_RS11225 NONE
LPH39_RS11220 NONE
LPH39_RS11215 2688297 .. 2688321 -  -5.7  -2.79915   ACTTACCGCACCACA          TCATCAATCCA TCC TGGATTGGGGA          GCTTGACCTTCAATT  52 169
LPH39_RS11200 2683049 .. 2683063 -  -5.7  -2.78015   GTAAGGACGTGAAAT               CGATG GTCGT CATCG               GTATTGCTCCTTTGC  52 181
LPH39_RS11195 2681744 .. 2681761 -    -7  -2.51966   GCAAAGGTTAGCAAT             TGCCAC ATTGCG GTGGCA              GTTGCTCCGGAATGC  56 195
LPH39_RS11185 2679807 .. 2679818 -  -4.4  -2.82742   AGGTTTCGAGAACTA                GGTT GGAA AACC                 TTTAGAGCGTATGTT  45 51
LPH39_RS11180 NONE
LPH39_RS11145 2671015 .. 2671025 -  -5.4  -5.07486   TATGTTGAAGAAAAA                 TCCT ATC AGGA                 TTACCGCTCAGTCGA  84 68
LPH39_RS11130 2667973 .. 2667989 -  -8.7  -2.69799   TGATTGGAGATATGA              CTTGGCC ATT AGCCAAG              TACTTCCATGAGTGA  61 17
        gloB 2664978 .. 2664998 -  -3.9  -3.75169   GAGCATGCCAGCAAA            CTGTTAGGT CAC ACCGAGCAG            GACATCACCGAGAGG  55 349
LPH39_RS11080 2660020 .. 2660075 -  -7.4  -3.12402   GAAATCATCACCGAA GCGGCAACCCACAGCGCCTTCA-ATGC CGG GCACCTGGCGGCGCTGATGACCACCGC GCCCGCCTGGGCCGC  60 373
LPH39_RS11065 2658219 .. 2658229 -  -3.2  -2.80472   TGGTACTAAAAAATG                 GTAC CTA GCAC                 GAGAGTTCACTGGGA  43 93
LPH39_RS11060 NONE
LPH39_RS11055 2657414 .. 2657433 - -11.4   -5.7946   TGCTCAATAAAAAAA            GCCCTGCG GGTG CACAGGGC             TTGGAGGGAAATCGC 100 201
LPH39_RS11050 NONE
LPH39_RS11045 NONE
LPH39_RS11040 NONE
LPH39_RS11035 2654504 .. 2654525 -  -2.5  -5.16237   AATCTTACGAAAAAA           CATTAAATAT CAA ATATTTA-TG           TGCAATTAGTTTCTG  73 247
LPH39_RS11020 NONE
        ribA 2647872 .. 2647886 -  -3.4  -3.14564   TCACTGGGTCAGCAA               CTCCAG TGT CCGGTG               ATCAGGATGTGGTCA  46 438
LPH39_RS10990 NONE
LPH39_RS10985 NONE
         fis NONE
LPH39_RS10975 2641100 .. 2641115 -  -5.4  -3.55761   TACGCATGGTCCAAA              CTCACA GGCA CGTGAG               GCGAACCCGGGATTG  56 113
LPH39_RS10970 2640546 .. 2640576 -    -6  -3.33696   TCGTTGCGTAAGGAA       CTGACCGACATCCA ATA CGGCCGTCTGCCAG       ATCGCTATGGGTGGA  54 171
LPH39_RS10955 NONE
LPH39_RS10940 2633157 .. 2633173 -  -2.2  -2.62184   TTGGTCTCGATACCA              CGGTAA TCGGC TTGCCG              GACGGTACCAGATAA  39 332
LPH39_RS10930 2631800 .. 2631811 -  -2.2  -3.02511   CTGAGCTTCGCAATA                GCTCG ACT CG-GC                TTGCTGGTCCTGCTT  42 67
LPH39_RS10915 NONE
LPH39_RS10910 2629192 .. 2629209 -  -5.5  -3.19026   GACGTTAACAGTCAA             TGCGCTG TATT CATCGCA              TTCTCCAGACGCCGT  52 4
        ssrS 2628778 .. 2628791 -  -2.3   -3.7948   GGAAGATGCATCAAA               CACCC CAGC GTGTG                GTTTATGTGGCTTGC  52 136
LPH39_RS10900 NONE
LPH39_RS10895 2626819 .. 2626832 -  -6.7  -4.10657   GGAGAGGTGGGAAAA               CTGAC AGGC GTCAG                CTGACGGTTGAGTTC  68 39
        rpiA NONE
        sbcB NONE
LPH39_RS10855 2618193 .. 2618204 -  -5.8  -3.21099   GTGCTTGAGGATCAA                CACC CGGT GGTG                 CTCCTAGCGTTCTGT  55 377
LPH39_RS10850 2616789 .. 2616802 -  -3.1  -3.88291   GACCACGCCTATAAA               GC-CAC CAG GTGCGC               TGCTGGGCGTTTGAC  54 280
LPH39_RS10840 2614283 .. 2614306 -  -3.8  -3.11634   TTCTATAGCAGTGAA          CGCTGTAC-GG GTT CCTGCAAAGCG          GGTTCTGGATGTATC  48 73
LPH39_RS10820 NONE
LPH39_RS10815 2601523 .. 2601552 - -20.1  -2.53263   TTTATCCTGAAGGCA       CGAAGCCCCGGTC TTAT GACCGAGGCTTCG        GAGGCCTGTCCAGGC 100 49
LPH39_RS10795 2598458 .. 2598474 -  -5.1  -3.61506   TCATTTTCAAAAAAT              TCACCGT TTT ATGGTGA              CAGCAATGATTTTTC  56 82
        bioC NONE
        lpxO NONE
        mnmG 2590066 .. 2590076 -  -2.4  -2.71731   GTCACTGTTCAATGA                 GGTG AAA CTCC                 AGCGCGGCGCATTAA  39 148
LPH39_RS10760 2589411 .. 2589424 -  -6.7  -3.55444   GCTTCAGCGGTGAAA               TCAGC TCAT GCTGA                GGTGAGCTTGGCCAA  61 64
        hemB 2584807 .. 2584827 -  -4.8  -3.20382   CGTGATATCGATTAA           CCAGTTGAT TACT ATCA-CTGG            AGTGGATCCATTCCC  50 100
        hemL 2581714 .. 2581724 -  -3.2  -3.67188   ACTGAGCTGAAAACA                 GCAA TGT CTGC                 AACAGTCGCACTTTG  53 121
        kdsB NONE
LPH39_RS10715 2578526 .. 2578549 -    -6  -3.80573   TGGATGATCAGCAAA          GCGACTCA AACACGCG TGAGCCGC           ACCAAGCTGGCCTGT  64 7
        uvrC NONE
        pgsA NONE
LPH39_RS10700 2575003 .. 2575020 -  -2.5  -2.82623   TCCGCTGCATAACCA             CTCTGCC ACCA GGCCGGG              AACAGGATTGTATAG  40 93
LPH39_RS10695 2574925 .. 2574948 -  -5.4  -5.20154   ATAGAACCTAAAAAA          CTCCAATA GCGGTCTG TATTGGAG           GCCTGGGTCGGAATC  85 20
LPH39_RS10675 2564324 .. 2564360 - -17.3  -3.14522   CGAATGCATACTCAA    TGTTCCTGGACCGATGC ATG GCACCGGTCCAGGGACT    GGATTCACCACTTGT 100 30
LPH39_RS10670 2561484 .. 2561504 -  -3.3  -4.26076   GTACTTTCATGAAAA            CTCCAATAG TGC CCATTAAAG            AGCCAGCAGATATCT  60 477
        pstS NONE
        pstC NONE
        pstA NONE
        pstB NONE
        phoU NONE
         rnt 2555674 .. 2555689 -  -3.2  -2.72558   AGAAGTGCCTAAGTA              CTCCTT GGAG ATGGAG               ATTGTTAGCTAGAAT  42 313
        rsmA NONE
        apaG NONE
LPH39_RS10625 2552397 .. 2552410 -  -3.1  -3.34716   GTACTTGTGAAAAAG               CAATG CAAC CATCG                TGATGCTCCAAACGG  47 330
LPH39_RS10620 2550089 .. 2550112 -  -5.4  -3.91897   CCGGCGAGCCAGAAA          TCGAGTGTCAT CGC ATGAC-CTCAA          ACGTTATCGCACAGG  61 118
        kdpF 2550017 .. 2550031 -  -5.6  -2.57132   TGTTCCTTTCAGAAG               CGTTCG GGG CGGACG               AGCACCGCCACGAGA  48 4
        kdpA NONE
        kdpB NONE
        kdpC NONE
LPH39_RS10595 NONE
LPH39_RS10590 2542201 .. 2542212 -  -5.8  -4.99134   ATGCCAAAGTAAAAA                GCAG AAAC CTGC                 TATGAATCTCCCCTA  81 100
LPH39_RS10585 NONE
LPH39_RS10580 2540698 .. 2540716 -  -3.8  -3.07994   GGCAATCGGAGCCAA             GCCAATCA AGG TGATGAGC             ATGACATCAAGCTTC  47 125
        recN 2526401 .. 2526414 -  -3.1  -3.03159   CGAACTGCTCGAACA               GTCCA GCAG TGAAC                ATCATCTCAGTGCTG  42 481
LPH39_RS10515 2525760 .. 2525783 - -13.8  -2.73681   GATTGATCCTAAGGA          GGCACGGCGC CGAC GCGCTGTGCC           GACGTAATACTTCTA  84 61
        smpB 2524012 .. 2524035 -  -5.3  -3.61715   CAGCGCTGTGAATAA          CCAACGTAC CTCAGC GTATGTTGG           TGCAGATGTTACCGT  56 525
LPH39_RS10460 NONE
LPH39_RS10390 NONE
LPH39_RS10385 2493928 .. 2493962 -  -9.8  -3.12803   TATCTATAGTTAAGA     CAGACGCAGGCTTCCC ATT GGCCTGCCAGCGTCTG     CATGATCCCTATTGA  70 190
LPH39_RS10375 2490851 .. 2490863 - -10.5  -3.15544   CGTCAGTTGGAGCAA                GCGCG TGA CGCGC                TGCAAGATAAATTAA  73 43
LPH39_RS10370 2487528 .. 2487562 -  -4.9  -2.66634   GAGTGGAGGACATGA    GC-CCGGCCTGCACAC ACGG ATGTACCGGCAGGTGC     CGGTGTGTGAATGGG  46 49
LPH39_RS10365 2484164 .. 2484196 -  -6.2  -3.30124   GGCGACCGTGCACAA     CGCTT-GGCTGCCGC TCGG GCGGCGGCTGAAGCA      GCGGTGGCTGCACAA  54 222
LPH39_RS10335 2479235 .. 2479260 -  -4.8  -3.63895   TGGAAGCATTCCAAA         GCTGATAAAT GGTTGA ATTTTTCAGC          TGGAATGAAGGCGCC  57 293
LPH39_RS10310 2474413 .. 2474438 -  -8.9  -4.17958   AAGATGTTTAATAAA         GGCGCATCGTG TATA CCCGATGCGTC          ACCGACATAGTACGT  80 511
LPH39_RS10305 2472759 .. 2472774 -    -6  -2.92091   ACACCTATTTACACA              CCCCCC TGTT GGGTGG               ACATGCCAGGGATTT  52 81
LPH39_RS10295 2470271 .. 2470297 -  -3.6  -3.45324   CATCTGTAGTAAACA         CAGCGGTACC TGCACAT GGTGCCGTTG         AAGCGCTATTACGAT  50 241
LPH39_RS10285 NONE
LPH39_RS10280 2464617 .. 2464631 -  -6.4  -3.80855   CTGTGGAAAAAGTAA               GGCAAT CGC ATCGCC               AAGGCTCACAACGTT  66 43
LPH39_RS10275 2463885 .. 2463899 -  -8.6  -3.73968   AAATCCTTGATGAAA               CCCAAT GGC ATTGGG               TTTTATTAAACATCT  71 412
LPH39_RS10270 2463130 .. 2463143 -  -2.3  -4.03413   ATCTTTTTATATAAA               GCGCA TAAC TGCTC                TTGGGTGCTAATACT  55 97
LPH39_RS10265 NONE
LPH39_RS10260 NONE
LPH39_RS10255 NONE
LPH39_RS10250 NONE
LPH39_RS10245 NONE
LPH39_RS10240 NONE
LPH39_RS10235 NONE
LPH39_RS10230 NONE
LPH39_RS10225 NONE
LPH39_RS10220 2450945 .. 2450968 - -19.6  -3.59698   CGAGCCCATATATAA          GAGGCCCCGC ATCT GCGGGGCCTC           CCAGTAACACAACAC 100 45
LPH39_RS10215 NONE
LPH39_RS10210 2446333 .. 2446353 -  -9.7  -3.28712   CCGGTGGTTGCAGAA            TGAATCGGC ATT GCCGATGCA            CCGGGCACCACCGAT  73 202
LPH39_RS10200 2445740 .. 2445765 -  -5.3  -3.03441   CAGTACTGGTGAATA         CGCTTGCACCG TGAT CGGCCCAAGTG          AACGCAATCACTGGC  51 161
LPH39_RS10175 2443101 .. 2443117 -    -3  -2.97475   TGCGTCATTAGAAAC             GCA-TGC ATGA GCAGTGC              CGCTGCGCTGGAGCG  43 451
LPH39_RS10165 2442145 .. 2442165 -  -2.4  -3.09878   GGCACGCACCCAACA            GGGATCGC TGCGC GCGAGCCG            CCATTCCAGCGCATC  43 509
LPH39_RS10160 NONE
LPH39_RS10155 2440109 .. 2440128 -  -7.9  -2.53581   TAGACGCTCAATGCA            TCGTGTC GCCGGT GACACGA             TGCATTGCCACGATT  57 443
        rpsT 2431664 .. 2431684 -  -3.2  -3.39556   AATGCCCGAAGAAGA           GGCTCACGC CGTT GCG-GAGGC            ACTGATTGCCGAACT  48 287
        uvrA 2426750 .. 2426760 -  -6.8  -3.53811   TGGATGCGGTCTAAA                 GGTG TAC CACC                 TGTGCGACCATGACA  61 10
LPH39_RS10080 2422716 .. 2422727 -  -7.2  -2.76263   GCCAGGACGGAACCA                GCGG GGTT CCGC                 CGCGCGGGCCGCCGT  57 59
LPH39_RS10075 NONE
LPH39_RS10070 NONE
LPH39_RS10065 NONE
LPH39_RS10060 2419517 .. 2419532 -  -6.1  -5.40072   CGGCCCTCAAAAAAA              CGAGG TTACAG CCTCG               CTGGAGGACACATTG  90 1
LPH39_RS10055 2418380 .. 2418398 -    -6  -3.65522   TACCTATCGGAACAA             CGTGCT GGAGCGA AGCACG             GCCAAGTCAAGCGCT  61 73
        ykgO 2403453 .. 2403466 -  -9.5  -5.98675   CAGAAAAACAAAAAA               CCGCC CTGA GGCGG                TTTTCCAGGACACAC 100 58
LPH39_RS09975 NONE
LPH39_RS09970 NONE
LPH39_RS09965 NONE
LPH39_RS09960 2399388 .. 2399404 -  -2.9  -2.70932   TCGCTGGTTCAACGA              TCCCTCT AAA AGAGGAT              CCACTGAAGTTTGTG  41 201
LPH39_RS09915 NONE
        scpB NONE
LPH39_RS09905 NONE
LPH39_RS12065 NONE
        ccmD 2381405 .. 2381422 -  -2.6  -3.49653   AGGATGGGGACATAA             CGCACC TGCAGG GGTGTG              TTGCCAGCGGTGACG  49 242
LPH39_RS09865 NONE
LPH39_RS09860 2378543 .. 2378554 -  -5.8  -3.44848   TGCTGTTATCAAAGA                CGCT CTGT AGCG                 GCGTTTACTTTAGGG  59 238
LPH39_RS09855 2376721 .. 2376732 -  -2.2  -3.57144   GCTGTCATTGCTAAA                CCTG CACG CAGA                 CAGCGGATGTTTGCC  47 308
        epmB 2371134 .. 2371153 -  -4.2  -2.52543   ACTCTGCGTAATCCA            GACGATGG ACAG CCAACATC             TGTGTGTCGAGTGGC  44 55
LPH39_RS09810 2368861 .. 2368893 -  -4.2  -4.19879   ATAAAACGCCCAAAA     GCACAGA-CCCTCAC GACT ATGAGAGATGTGTGC      CAGTCTAGCCGTATT  62 360
        bioD 2366741 .. 2366751 -  -5.4  -3.05384   CTCGTTGGCATCGAA                 GGTT CGG AACC                 CGTGTCCGGAGGATA  51 116
        aceE 2351334 .. 2351348 -  -3.4   -3.5393   AGGACCGTCTCGAAA               CCTCCG GGC CGGTGA               CCCGCACCGTGTATT  50 337
LPH39_RS09735 2349219 .. 2349231 -  -6.2  -2.62192   CCGTAGTCAAGGAAG                GGCC GTCCA GGCC                ATCGTGATCGCACTT  51 4
LPH39_RS09730 2348259 .. 2348269 -  -4.6  -4.51743   GCAGCAGGAAATAAA                 CCGC GTT GCAG                 CTCGTGCCCTGATCA  71 250
LPH39_RS09725 2347705 .. 2347742 - -26.5  -2.63301   GAGACGTGCAGACCA   CCAGGGAGTGACGTCAG CAAG CTGACGCCACTCCCTGG    CGACAAAGCTTGCGA 100 53
LPH39_RS09720 2347515 .. 2347531 -  -4.3  -3.75153   TCCGCTGAACCTAAA              GCTGAGC AAG ACGCAGC              TGCTCATCAGCACGG  55 53
LPH39_RS09715 2346212 .. 2346228 -  -5.7  -3.02144   CGACGTCTTGGAATA              GCACGCC ACT GGCAAGC              CGCTTCTTGGCCGAC  53 460
LPH39_RS09705 NONE
         asd 2344953 .. 2344974 -  -4.3  -5.00616   GTCGCGTGGAAAAAA           GCTGGCCTG CTTT CATGGCAGC            GGCGGGTCACAACAC  74 96
LPH39_RS09695 NONE
LPH39_RS09690 2339617 .. 2339631 -  -4.3  -2.53581   TAGATTTTCAATGCA               TCATC TCAGT GATGA               GATACCGAGGATGGT  44 90
LPH39_RS09685 2338074 .. 2338085 -  -5.8  -3.76224   CTTCGATCCAGCAAA                GCTG ACAG CAGC                 TCGTTTTTGAATTGG  61 302
        bioF NONE
        bioH 2330538 .. 2330554 -  -3.6  -3.06679   AACATGGGTATTGAA              GGCTGC TCAAT GCAGTC              AATCCGTACTTGGCG  45 473
        parC 2322758 .. 2322775 -  -5.5   -2.9176   AACCGCATGCATATA             CAACCCG TACA CGTGTTG              TCGATTCATGGCATC  49 222
LPH39_RS09620 2316559 .. 2316575 -  -5.1   -3.1272   TCAGAAAACCAGACA              TGTCGAT ATG AACGACA              CCTTCGATGATAAAT  52 433
LPH39_RS09590 2312374 .. 2312385 -  -2.2  -4.67478   GAAATACAAAAAGAA                GATG ACCG CACC                 AGCCATATAGCGATT  67 366
LPH39_RS09575 NONE
LPH39_RS09570 NONE
LPH39_RS09565 2310079 .. 2310096 -  -9.1  -3.01712   GCCCGGCTTTGAACA             TGCCGCC TAAA GGCAGCA              TGCGCTGATGCCATG  66 233
LPH39_RS09555 2308289 .. 2308315 -  -7.2  -3.33696   TCGTGGGTCAACCAA         TCGTGCTGCCCT GCG ATGACGGCACGA         TCGTGTTTCTTGAAA  62 244
LPH39_RS09550 NONE
LPH39_RS09545 NONE
LPH39_RS09540 NONE
LPH39_RS09535 NONE
LPH39_RS09530 2305924 .. 2305934 -  -2.4  -4.09685   TTTCATTTGGGAAAA                 CGGC GAT GCCT                 ATCAGGTTGAAATTG  56 367
LPH39_RS09515 NONE
LPH39_RS09510 2303944 .. 2303981 -  -6.3  -2.74019   GAGAATGTGTAACCA   CCCAGCAGCAGTAGTACA GGT CG-ATTGCTGCTGCTGGA   GTGGAGCGTCTGTTG  53 406
LPH39_RS09500 2303385 .. 2303401 -    -3   -2.5409   ACAATCTCCAATGTA             TCC-GCA TGAC TGCCGGA              TGCATCCGCAAGCCG  40 184
LPH39_RS09490 2302370 .. 2302382 -  -6.3  -3.56594   GTAAATCGCTTGAAA                CGTAA GGG TTACG                GGAGTTTTTTCATAA  61 342
LPH39_RS09445 2292016 .. 2292032 -  -2.1   -3.1352   TGCCAATCCAACAGA              GGATCGC GGT GAGGTCC              GATGCATCGCCCCTC  43 113
LPH39_RS09430 NONE
        aroB 2288512 .. 2288532 -  -3.2  -2.99449   TTGGAGAGAATGAGA            CCGTTCGT TGTCC ACAGACGG            GTGTTGCAGCAGCGT  45 199
        hemE 2287140 .. 2287162 - -10.6  -2.77781   TGGTATGAAAACTCA           GTGTTCAGCG CAT CGTTGAACAC           TTTCGACTCTGAATG  71 89
LPH39_RS09405 NONE
LPH39_RS09400 NONE
LPH39_RS09395 2280366 .. 2280392 - -12.3  -5.71712   TCGCACATAAAAAAA         CGGCGGACC CGACGAGGC GGTCCGCCG         TTTGAGGTGCTGTAG 100 47
LPH39_RS09380 NONE
LPH39_RS09375 NONE
        minC NONE
        minD NONE
        minE NONE
LPH39_RS09355 2273716 .. 2273726 -    -4  -3.34398   GTTTTTCCGTAAAGA                 TTTC CAC GAAA                 GCGGTGTTCCATACG  50 257
LPH39_RS09255 NONE
LPH39_RS09250 NONE
LPH39_RS09245 2252448 .. 2252458 -  -3.2  -3.79747   TCATTTAGGATCAAA                 CTCC TTC GGAA                 CATCGCGACCGAACA  55 0
LPH39_RS09240 2251729 .. 2251741 -  -4.8   -2.7185   ATTATGTTGGAATGA                CAGC GTGCT GCTG                TTCCTGATGTTATGG  46 79
LPH39_RS09230 NONE
LPH39_RS09225 2247574 .. 2247609 -  -8.4  -2.93858   GATCATATTCATAGA    TGTCTATCGTTAAGAC ATAT GCCTTAACGATAGCGA     TAACATGAGTATTCA  63 38
LPH39_RS09220 2246051 .. 2246071 -  -4.6  -3.38314   GTGAATGGCCAAAGA            TCGCTCCG CATGT CAGTGCGA            TGCGTGAGGGTATTG  52 401
        parE NONE
LPH39_RS09170 2234535 .. 2234560 -  -3.2  -2.96695   TGGGCTATGAAATGA         GGGTGTCGAC AATGCG GCCAACATCC          GACATGCGATGCTGC  45 369
LPH39_RS09165 NONE
LPH39_RS09115 2224526 .. 2224536 -  -2.4  -3.48505   TTCCAAAAACCAAGA                 CCGC TGT GTGG                 TGATGTAGGCTTTGC  47 60
LPH39_RS09110 2221457 .. 2221474 -    -7  -3.71913   GGGATATGGAAAACA             GTGCTG CATCCC CAGCAC              GTCGATAGGGCGCAA  67 329
LPH39_RS09105 2217498 .. 2217515 - -11.3  -5.88197   TCAAAGATAAAAAAA             GAGCCAC ATGC GTGGCTC              TTAAGTTGTATTCAA 100 71
        ppsA NONE
LPH39_RS09080 2211047 .. 2211060 -  -2.4  -3.90298   CTGAAGCAAACACAA               TTGC TTTCTT GCAA                CAATGGGTCGACACC  54 481
LPH39_RS09070 NONE
LPH39_RS09065 2208306 .. 2208349 -  -5.5  -3.06696   TTGGCGTTTAACAGA TAATAAAAAAAGCTCCTTC ATGATG GAAGTTGCTTTGTTTATTA GCTTTCATTTATTGG  51 68
LPH39_RS09060 2206499 .. 2206528 - -16.5  -2.89564   CCTTTATTGGATACA       GGACGCCACACGA GAGA TGGTGTGGCGTCC        GTGGCACTCAGTTGC 100 64
LPH39_RS09050 2203168 .. 2203179 -  -5.8  -2.85056   ACTTTCAATTGAAAT                GCTG ATCG CAGC                 GTCTTTAAAACATTC  52 88
LPH39_RS09045 NONE
LPH39_RS09040 NONE
LPH39_RS09025 2194723 .. 2194744 -  -3.7  -2.95766   TATAAGAGACAAGCA           CTAGGGTAG GAGC CTAACCTAA            GTTAGCTGCTCTTGC  45 27
LPH39_RS09020 2193719 .. 2193775 - -18.1  -2.52676   GAGTCGGTCAAGGGA GTGGGTTGTATTATCTCCTCCGAGTGC AAT GCACTCGGAGGAGAATGTATAACGCAC CGGCTCCGATTCCAA 100 62
LPH39_RS09000 2186062 .. 2186077 -    -9  -3.01712   CGGTGCTCGCCAACA              TGACCG AATT CGGTCA               AACCCCACTGTTGAC  61 355
LPH39_RS08980 NONE
LPH39_RS08975 2176470 .. 2176480 -  -5.4  -2.52464   TCTTGTGGTAACGCA                 GTGA TCG TCAC                 CAGCATTGATGTCCT  48 407
        hrpB NONE
LPH39_RS08965 2171933 .. 2171948 -  -2.6  -4.16016   GTATCTGGGAATAAA              TTGAAA CTAA CTTCAA               TAGAAAATGGAGTAC  59 191
LPH39_RS08960 2169915 .. 2169947 -   -18  -3.21416   TACGGTCATGACCAA      GCTGCATCTCAATA TGTTG TATTGAGATGCAGC      AGGTCTGCCCTCTTA 100 281
LPH39_RS08950 NONE
LPH39_RS08945 2163029 .. 2163039 -  -5.4  -3.79747   GTAGTGATTATTAAA                 CTCT CAC AGAG                 TCTAGGCTTGGTACA  61 82
LPH39_RS08895 2152788 .. 2152800 -  -4.1  -2.57132   GCCCGTGGCGAGAAG                GACGT TCA ACATC                AGGTAGCAAGAATCG  44 24
LPH39_RS08890 2151629 .. 2151655 - -12.3  -2.59482   TAAATTAGGAAGCGA         TGGGCGCCG GATATCAGT CGGCGCCCA         GTAGCTGCTACAGCT  78 44
LPH39_RS08825 NONE
LPH39_RS08820 2143142 .. 2143160 -  -5.8  -4.64598   TAACCAGCTTAAAAA             CGCGGGGG TTC CTCCTGCG             CACGCCGAGGCACAA  75 243
LPH39_RS08810 NONE
LPH39_RS08805 2141085 .. 2141097 -  -3.3  -2.71712   TTCGGTGTTGCAAAG                GCCCT GAT AGGGA                TTACGCCCAGCTATT  42 26
LPH39_RS08800 NONE
LPH39_RS08795 2139727 .. 2139778 -  -2.4  -3.89235   ACCAAATAAAATCAA TGAATTGCAAAGCTATGCCCGCT CCGCAAT AGTG-GTATCGCTCCGCAATTCA CCGCGTGGGCGTGGC  52 23
LPH39_RS08770 2134478 .. 2134491 -  -2.3  -3.14931   TGCATGCTCGACCAA               GGCTT GAAG ATGCC                GCCACACGGTCAGGT  43 255
LPH39_RS08745 2130731 .. 2130742 -  -5.8  -3.31144   GGTGGACTTCTATAA                GGAC CATT GTCC                 TGGCTGTCGTATGCT  57 290
LPH39_RS08675 2111971 .. 2111987 -  -6.5  -3.25088   TCGTAAATCTACCAA              GCCTCCT CTG AGGATGC              TGCGTTGTTTTTGTC  57 519
LPH39_RS08670 2110253 .. 2110269 -  -7.3  -3.10715   GTGATTAGTATTGAA              GTTGGAA GTG CTCCAAC              TTGATCTCGGCAATG  60 371
LPH39_RS08660 2107007 .. 2107020 -  -2.4  -3.16564   GTCCCATCCTACCAA               GGAT GGTTTG ATCC                ACTCTGCCAACGCTC  43 74
LPH39_RS08500 NONE
        atpB NONE
        atpE NONE
LPH39_RS08485 NONE
LPH39_RS08480 NONE
        atpA 2079856 .. 2079878 -  -9.8   -3.5774   ATTCAAGTCGGTAAA           GTAGCGGACC TGA AGCCCGCCAC           AACCGCTACGGTTAC  74 37
        atpG 2078940 .. 2078956 -  -4.3   -2.8655   GGGATTCAGATCAGA              CGGCAGC GGC ACCGCCA              ACGATCTCTGATATT  45 4
        atpD 2077406 .. 2077428 -  -2.6  -2.69977   AGAGGGGACAGATGA           CGAGCCGA GGTTTAT CCGACCCG           TCGTGGATACCAATC  41 52
LPH39_RS08460 2076924 .. 2076938 -    -5  -3.61398   CCCTGTCGGGAAGAA               CATCAA TGC TTGACG               GTGCGGCGGAGGCGC  55 13
LPH39_RS08455 NONE
        glmU 2074079 .. 2074091 -  -3.3  -2.83522   AGTGTCTGATCAAAC                CGGCA CAC CGCCA                TAGGCATTTCAATGT  43 288
LPH39_RS08405 2065347 .. 2065367 -  -2.5  -2.87211   ATGCTGCCGGATAGA            CCGGATT CTGGCGT ACTCCGG            TGAGTGTTACCAAGT  40 252
LPH39_RS08400 NONE
LPH39_RS08395 2063492 .. 2063517 -  -2.5  -4.07885   CAGTCGTCTTGAAAA         CGATCGAGGGCG AGT CCCCCTCCAT-G         AGTTTGAATCTCGCA  55 113
LPH39_RS08370 2060436 .. 2060448 -  -3.4  -4.15565   TGCACGAGGTCAAAA                GATG GTGTG CATC                GCAGTATGATTCGAT  60 44
LPH39_RS08345 NONE
        metF 2049441 .. 2049452 -  -2.2  -2.60901   ATACGGCGAATCAAG                GCTA GGGT CAGC                 TGGTCAGCGGTGGAG  39 74
LPH39_RS08325 NONE
LPH39_RS08315 2044658 .. 2044673 -  -4.6   -3.7282   TCACTTGACTAACAA              GCCCTG TATG CAGCGC               TGCCACGACCCCATC  57 152
LPH39_RS08295 2037737 .. 2037749 -  -4.7  -3.61398   GCGCGCCGGCAAGAA                CGCCG GCG CGGGG                AGACGTTGCCGTGAT  55 76
LPH39_RS08235 2017548 .. 2017584 -  -5.9  -3.14132   GTTGTTTTTGAGGAA   GATGCCG-CTGCTCCAC TGACT GGGGAGCAGGCGAC-TC   ATGAGTTTCTTTGGG  55 156
LPH39_RS08200 2010855 .. 2010867 -  -5.5  -3.04715   TAGGCGGGTCAAAAG                GCCTA TGT CAGGC                GACCTCCTGCGAAGG  51 20
LPH39_RS08195 2010320 .. 2010335 -    -4  -4.07568   TCTTCGCCTCTAAAA              TCTCCT GGTA AAGAGA               TGCAATCTTGGAATA  60 119
LPH39_RS08185 2008777 .. 2008791 -  -4.2  -3.16191   CTACAGTTCTACGAA               CGTGGC ACC ACCACA               CCCAAACTCACCTGG  47 446
LPH39_RS08155 2004980 .. 2005007 -  -2.6  -2.55351   CTCGGGGATAGCAAG        GCGTGCTGGCTCA TGG CGAGACA-CCCGC        GTTAACAACCGCTTT  40 8
LPH39_RS08150 NONE
LPH39_RS08145 2003351 .. 2003361 -  -2.4  -2.80816   GTCCCATGTAGGACA                 GGGC CCC GTCC                 GCATCTACTCTTGCT  40 30
LPH39_RS08140 NONE
LPH39_RS08135 2002510 .. 2002528 -  -5.8  -4.64598   TAACCAGCTTAAAAA             CGCGGGGG TTC CTCCTGCG             CACGCCGAGGCACAA  75 264
LPH39_RS08125 NONE
LPH39_RS08120 2000453 .. 2000465 -  -3.3  -2.71712   TTCGGTGTTGCAAAG                GCCCT GAT AGGGA                TTACGCCCAGCTATT  42 26
LPH39_RS08115 2000177 .. 2000189 -  -4.1  -3.40611   CGCATCGTAACAACA                CCTTA GTC CAAGG                CCGCAAAATTAGGGC  50 15
LPH39_RS08110 1998846 .. 1998858 -  -3.3  -3.98172   ACTAAGAGCGAGAAA                CAGGG AAA CGCTG                AATCCTTGCCACGCA  58 272
LPH39_RS08085 1992644 .. 1992654 -  -3.2   -2.7263   ACCATTGTCGGAAAC                 CAGC CTT GCTA                 AGAGATGCTCTGGCC  42 40
        dprA NONE
LPH39_RS08075 1990888 .. 1990901 -  -2.3  -2.95656   AATGGAATGCATACA               GCAGG TAGG CCTGT                ATATGTTGAGCGCTT  42 40
LPH39_RS08070 1989746 .. 1989756 -  -5.4  -3.65529   ATAGGCCTAGGGAAA                 TCAC GGA GTGA                 CGAAAGTATCACACA  59 56
LPH39_RS08065 NONE
LPH39_RS08060 1986083 .. 1986095 -  -7.7  -3.78329   TGTGACCAAGGTAAA                CCATC AAT GATGG                TGGCAGGTGATCCGG  68 304
LPH39_RS08055 1984848 .. 1984866 -  -3.2  -2.76225   AAGTAACCGTAACCA             TCCTAGAT GGC ATCTAAAA             CTTTTTCTACCTTGC  43 108
LPH39_RS08050 1983596 .. 1983608 -  -4.7  -3.55447   TCATTCAGCAGAGAA                GACGC ATA GCGGC                CAAGTTGATATGCAG  55 220
        wrbA NONE
LPH39_RS08035 1979120 .. 1979133 -  -3.1  -3.50393   TGGCACCGGATACAA               GCGGTG CAT CAC-GC               CATCTTGATTGATTC  49 253
LPH39_RS08030 NONE
LPH39_RS08025 1978267 .. 1978278 -  -5.8  -4.06179   CTGAAAACGCAGAAA                GACG CTAT CGTC                 GATCTGGTCAATTTG  66 159
LPH39_RS07925 1958117 .. 1958146 -   -10  -3.15249   CAGACGTGCTATCAA       TGGGCTTACCCG TCTCAG CGTGCAAGCCCA        TTGATGAAAGGGACG  70 10
         zwf NONE
         glk NONE
         pgl NONE
         edd NONE
LPH39_RS07895 NONE
LPH39_RS07890 NONE
LPH39_RS07885 1949278 .. 1949303 -  -6.9  -4.27886   TGTTAAACACAGAAA         CCTTCGACATT GGGG AGTATCGAAGG          TATGGCGTCCCCACG  71 28
LPH39_RS07880 1949022 .. 1949045 -  -3.8  -3.46474   ACTAAAAATGAAAAT          GCCCGG AACCTTCACAAG CCGGGC           GTTTCATAGTGAACC  52 75
LPH39_RS07835 1942805 .. 1942819 -  -5.7  -3.88291   CAGTATCGTTACAAA               GTCAC GGCTG GTGAC               CGCTACAGTGGGGTG  64 454
LPH39_RS07825 1942129 .. 1942141 -  -3.4  -3.83844   GGGATGAAGGAATAA                CAAG CCTAC CTTG                GTGCCATTGATGCGA  55 170
        pyrH 1939319 .. 1939330 -  -4.4  -3.01712   CGGCGTTGCTGAAGA                CAGT TGAA ACTG                 AAATGAAGTGCTGTG  47 505
LPH39_RS07815 1937664 .. 1937687 -  -8.1  -2.78384   TGGCTGTCCATGACA          GAACCCGGC TTATAG GCCGGCTTC           ACCGTTTCCCCATTA  59 483
LPH39_RS07795 NONE
         frr NONE
        uppS NONE
LPH39_RS07775 NONE
         dxr NONE
        rseP NONE
        bamA NONE
        lpxD NONE
        fabZ NONE
        lpxA NONE
        lpxB NONE
LPH39_RS07735 1918992 .. 1919010 -  -4.4  -3.18869   GAATAAATGAGGGAA             GTGCGTTG TGT CGGCGCAC             AGCGTCCGGTTGGGC  48 122
LPH39_RS07725 1915557 .. 1915578 -  -3.7  -2.71731   TTGATTGGCGAATGA           CTTACCTGA AAAA TCAAGAAAG            TAGTCTGAATCTCAA  42 484
        ahcY 1912659 .. 1912691 - -12.7  -3.47227   TCTGAAGCACCATAA      TGCCCGTCGTCCG GTTGCGT CAGTCGACGGGCA      TGTTTTCTATGGCTT  89 414
LPH39_RS07710 1907261 .. 1907273 -  -4.7  -2.88544   TTTCATGGTGATAGA                TGCGG CCA CCGCC                ATTCACTATGTGTGG  47 53
        plsB 1904562 .. 1904574 -  -3.4  -3.72576   CGTCGTGCCAGCAAA                GATG TAGAC CATC                ATCATCGACAATGGC  53 69
LPH39_RS07695 NONE
LPH39_RS07690 1899800 .. 1899815 -  -3.2  -3.06501   TATAGCGTGATTCAA              GTCCGA TGAG TCTGAC               GCAGACGCAATCGCT  45 120
LPH39_RS07675 NONE
LPH39_RS07670 1893380 .. 1893395 -  -3.2  -4.01419   GAGCAATGAATCAAA              GACGAT ATGC ATCGAC               TTAACTCGGCTGAAC  58 26
LPH39_RS07665 1892421 .. 1892462 - -13.2  -4.18494   TACGGTCAGTTAAAA GCCCAGGAGAAAGCCGCTGG CAAA CCAGCGGCTT--TCCTGAAC ACGTGAAGTACTGAA 100 47
LPH39_RS07660 NONE
        tesB 1889441 .. 1889453 -  -3.4  -3.53012   GCGCTGGCTGTTAAA                GATG GCACG CATC                GATTAATCCTTGGGC  50 28
LPH39_RS07650 1888635 .. 1888646 -  -2.2  -3.06569   CCAAGGTTGCAAAAG                CGAC GTGC ATCG                 TATTGGTGTTTCACA  42 340
LPH39_RS07645 1887179 .. 1887192 -  -2.3  -2.73483   ATGTCATCGCAAGGA               GACGG TGTG CCGTT                GCTGTATCGGTCGGA  39 409
        mntR NONE
        tadA 1879914 .. 1879928 -  -5.7  -2.56596   CTCTTTACGAAGTCA               GGAGA CGATC TCTCC               ATCCTTTTCAATCAT  48 491
LPH39_RS07580 1872135 .. 1872170 -   -12  -2.81815   GTGAATTACTAATGA    TGACCAAGGGACTTAA CTAG CTAAGTCTCTCGGTCA     TAGGGTTTAACTGCA  80 32
LPH39_RS07545 NONE
LPH39_RS07540 1866780 .. 1866794 -  -2.7  -4.07568   CTGGCGCTTGCAAAA               GCCTG CGGAC CTGGC               CCAGGAAACCCTGAT  58 405
LPH39_RS07530 1865221 .. 1865250 -  -2.8  -4.84359   CCAGGTTGATAAAAA       CAGGGCAGGCACC GTCAA AGCGCCTG-CATG       CGACACATCAGTTGC  71 33
LPH39_RS07525 NONE
LPH39_RS07520 1864322 .. 1864354 - -21.4  -3.21099   TGGTTTCAGTAGGAA     GCC-CCCGCCATCGG CGTA CCGATGGCGGGAGGC      GCTACAGACAGCGAT 100 40
LPH39_RS07515 1863856 .. 1863900 -  -6.4  -3.65351   TGATGTTTATCCAAA CGGGGACAGCGG-CATGGC TCGTCCAG GCGATGGCAGCCATCCCCG GTCAATACGGCTTAC  63 37
LPH39_RS07510 NONE
LPH39_RS07505 1861468 .. 1861502 - -16.5   -3.3785   TCAAGCGAGCCAGAA     CGTGGGAAAACTGGC TCGTC GCCCGCTTTCCCACG     TTCGATGCCACGCAA  90 215
LPH39_RS07430 NONE
LPH39_RS07425 1851516 .. 1851527 -  -5.8  -2.54193   GACGACTTCAATGGA                GTCG ACCA CGAC                 ACGATAGATCACGAT  50 41
LPH39_RS07420 1850442 .. 1850454 -  -4.1  -3.48593   CAGTGCCTCAGACAA                CGATA TTT CATCG                AATTATTTTACGCTT  50 365
LPH39_RS07410 1846968 .. 1847001 -  -5.4  -3.01791   ATCTCTTTTTCAATA    TGATGGGATGC-CCCT GCAA AGGAAGCATCCC-CCA     TCAATACGTGCCGCA  51 108
LPH39_RS07360 1835553 .. 1835593 -  -5.4  -4.16016   TGATGCGCGAAGAAA CGCCGCAGCTGTTCTGGCG TTCC CGCCACAACAACC-CAGCC  AATGTTTTTTACTAC  64 195
        cysS 1827745 .. 1827765 -  -8.3  -2.56604   ACAAGCCATAAAACG            CACTTGCTG ATG CATCAAGTG            ATTGCCGCATGTGTT  60 53
LPH39_RS07325 NONE
LPH39_RS07320 1825614 .. 1825648 - -11.4  -2.52543   ATGCTTGTCAAGCCA     TGCGTCAAGATCGTCA TCA TGGCGGTCTTGACGCT     TACGGTGCACGGCTA  75 270
        yidD NONE
LPH39_RS07285 1820425 .. 1820445 -  -7.6  -2.79803   CAACTGCAGGTAAAG            TCAGCATG ACTAA CATGCCGA            GTCTGAGCAACTTGT  59 59
LPH39_RS07280 1819180 .. 1819194 -  -2.8  -3.25088   TTTCAAACGCATCAA               TGACGA ATA TGGTCA               TGCTGCTGGAGACGC  46 459
        htpG 1810844 .. 1810865 - -15.9  -3.41051   GGACCGTGAGGACAA           TGCCCCTGG ATGT CCAGGGGCA            TTGCTGGTGTATCGG 100 94
LPH39_RS07230 1805356 .. 1805387 -  -5.3  -3.14211   AGCGGTGGTGATGAA     TGGCTGCTGCA-GTG ATTG CACGTACAGCAGC-A      TTGATGGCCTTATGT  52 63
LPH39_RS07225 1802800 .. 1802821 -    -3  -3.15249   CAGATTGCCTATGAA           CTGGGTTT GGCGGA AAACACAG            TCAAGGTGCATGTGA  43 163
LPH39_RS07200 NONE
LPH39_RS07195 1795563 .. 1795575 -  -2.7  -2.85668   GAGGGTCATACGAGA                TTCCT TGA AGAAA                TTGAAAGTAGGCGTG  42 65
        phbB 1794784 .. 1794807 -  -2.4  -3.10464   GTAGTAAGGTGAAGA          CGTG-TTGCTA TGG CAGCGATCACG          TGTGGCCCTTATTCC  43 34
        acnA 1759088 .. 1759108 -  -6.7  -2.71712   GCGTTGCTGGTAAAG            CGCTGGTGC CTG GCTCAAGCG            GGCTTGCGTGTGTTC  53 19
LPH39_RS07030 1756044 .. 1756064 -    -4  -4.13304   AAATGAGGTCCAAAA            GTGCTGAT CAGGT ATCAGGAC            GATCCATGGAGAGAT  60 66
LPH39_RS07025 1753526 .. 1753549 -  -3.8  -4.08394   AGAGTGTTGCCAAAA          TCGAGGTCAG GGTG CTAACCCCCA           AGCCGGTTAAGTCCG  60 329
LPH39_RS07020 1751450 .. 1751460 -  -6.8  -2.84602   GGTAGGTGAGGAAAG                 CTGG TGG CCAG                 TCGGTTAGACCAGAG  54 142
LPH39_RS07015 NONE
LPH39_RS07010 NONE
LPH39_RS07005 1749986 .. 1749996 -  -5.4  -2.97902   GAAGAGGATCATATA                 TCCA TTG TGGA                 GCAGGTTGAAGCACC  51 64
LPH39_RS07000 1748852 .. 1748863 -  -3.6  -3.05844   TGTTCTATTCCAACA                GCCG TGCC CAGC                 GTTGCAAATCCTCGA  45 3
LPH39_RS06995 NONE
LPH39_RS06990 1746654 .. 1746690 -  -3.6  -3.53444   GGATGGTGTGTCAAA    CAGTCGGCATCCTG TTGTATGTG CAGGTGGCTGACTG    TAGTTGGGTATGGTG  50 280
LPH39_RS06965 1740078 .. 1740091 -  -2.3   -4.0162   CCGTGACAGGATAAA               TGTCG TACC CGTCA                TGTGGAGATATCCAT  55 149
LPH39_RS06950 1735840 .. 1735850 -  -6.8  -2.60075   CTTGCTGGAAGCAAG                 CGGA ATG TCCG                 AGCATCAGGTCTTAA  53 90
LPH39_RS06945 1734396 .. 1734417 -  -6.5   -3.3056   ACAAGAAGATTAACA           GTCAATCGG ATCA CCGCCTGAC            TCGGCGCCGTGTCGG  56 474
LPH39_RS06935 1732231 .. 1732253 -  -6.2  -3.62096   GTTCATCAGTCCAAA           GGGGCCATTC CAG GAATGGCAGC           CGTAGTGCGTGGGAC  61 69
LPH39_RS12040 1728541 .. 1728555 -  -8.6  -2.77523   GTGCCATGAACATTA               CCAGTT TGT AACTGG               TGGCCCAGCCCAAGC  62 203
LPH39_RS06920 1724160 .. 1724175 -  -3.2  -3.57144   TGCGTGATTCTGAAA              GCATGA ATTT TCCTGC               CGAACATCAACACGC  50 516
LPH39_RS06915 NONE
LPH39_RS06910 1723156 .. 1723167 -  -4.4  -4.13767   GCCGGTACCCTAAAA                CTGT TAGC ACAG                 CAAAACTATATCTTG  60 321
LPH39_RS12035 1722150 .. 1722163 -  -5.3  -2.91264   CTTGCCAGCGAGATA               CTTGA TGAA TCAAG                TAAGCCAACGATGCT  49 274
LPH39_RS06885 NONE
LPH39_RS06880 1714317 .. 1714339 -  -7.6  -2.71712   GGCTGGTCCGCAAAG           GATGCCTGCG GGT CTCTGGCATC           TGACGGCAGCCGGTC  53 448
LPH39_RS06855 NONE
LPH39_RS06850 NONE
LPH39_RS06845 1706962 .. 1706981 -  -7.2  -4.11484   GCTAACGCTCTAAAA            CATGGCTGG TAG CCAGC-ATG            GCGCCCATGGAAGAC  71 87
LPH39_RS06840 1705996 .. 1706011 -  -2.6  -3.14132   TCCTGCGGCTAGCAA              TATCCA GATG TGAATA               CCTAAGGTTGACGTT  45 236
LPH39_RS06830 1704046 .. 1704064 -    -6  -3.53012   CTTTGTGCTTGGAAA             CCATGTCA AAT TGACACAG             ATGGCGGTGTTGTAT  59 199
LPH39_RS06825 1702608 .. 1702621 -  -2.3  -3.67296   CATCACCCAGTTAAA               CAGCG GTGT CGCCA                TCAATGTGGAGAGGA  50 47
LPH39_RS06820 NONE
LPH39_RS06815 1697390 .. 1697404 -  -4.2  -4.14392   GGCCAATGCTCAAAA               TCATCG TTT CGCTGA               TTTCTTCAGGGTACG  62 149
LPH39_RS06805 1694589 .. 1694624 - -22.2  -2.79183   TCCATCCTTAGCACA    TCCATTCATAACCTCG TTTA CGAGGTTATGAATGGA     TGTGCTAAGCATAGA 100 55
LPH39_RS06730 1675809 .. 1675819 -  -5.4   -3.2048   TTTAAAGGTCAGCAA                 GCAA GAT TTGC                 TGCCGAAGACGAAAG  50 230
LPH39_RS06685 1665052 .. 1665068 -  -3.6  -5.38054   GCTCACAAATAAAAA              CGCCCA ACCGA TGGGAG              GTATGAGCGTGGAAT  81 43
        pstS 1661441 .. 1661466 - -11.8  -4.42287   TAAAGAATCAATAAA         GGGACGCTGC TTGGAG GCTGCGTCCC          AATCATTGTGATTAA  93 62
LPH39_RS06640 1652710 .. 1652730 -  -3.3   -4.6821   AAGCGGAATAGAAAA           CG-CAGCA GTACGG TGCTGACG            ACTGGCATTAGTAGC  69 33
LPH39_RS06625 1648708 .. 1648734 -  -7.2  -3.14132   CTGTGGTCGGAGGAA         GGGACAAGCCTT GAC AGGGCCTGTCCT         GACCCAAGTTTAAGG  60 447
        dnaE 1644989 .. 1644999 -  -6.8  -2.76492   GGATTCATGGCAAAC                 CGTC TTT GACG                 TAAGGCGGCAAGTGT  54 102
LPH39_RS06615 1643660 .. 1643682 -  -4.9  -3.54919   AACCATGGTTGGAAA          CGGCA-GCAA TTGG TTGCATGCCA           AGGTTGGGTTGGTGA  54 365
LPH39_RS06605 1642656 .. 1642673 -  -5.6  -3.32963   ATCTCGAGCCCAGAA             CTGCTT TGCTGG AAGCAG              CCTGGTGTAGTGAGG  54 91
LPH39_RS06600 1640898 .. 1640908 -  -5.4  -3.04461   GAGGGATCTTTAATA                 GGAT ATT ATCC                 GGATTCGCTGTTTCT  51 359
LPH39_RS06590 1638281 .. 1638307 -  -6.6  -3.08464   TTACGATGCAGGTAA         GTGTGTAGCA GGATTAT TGCAACACAC         GTACCTGTAGGCTGT  55 270
        nudE NONE
        cysQ 1629030 .. 1629045 -  -3.3  -2.74999   GAATGGGGAATAGGA              TGGTT CAGGCC AACCA               ATCGCGCCAAGGCAG  43 14
        mazG 1627784 .. 1627797 -  -5.3  -4.89567   GTTGAAAAGATAAAA               CCATT TAGA AATGG                TGAAAGCGTGGTACG  78 396
LPH39_RS06545 1626533 .. 1626543 -  -2.4  -3.09834   CAGCGCATGACTCAA                 CCTC GGT GCGG                 TGGTTGAGACTGTGT  43 11
LPH39_RS06540 NONE
        gcvT 1624381 .. 1624392 -  -3.6  -3.01791   AGGTCTGTCCGAATA                GCGC ATTG ACGC                 CATAGCTATGGAACG  45 462
        gcvH 1623592 .. 1623611 -  -6.4  -3.14132   TCCTGTTCGGATTAA            CAGTGGAT TGTG ATCCTCTG             CCACAGATACGCTTT  57 81
LPH39_RS06525 1621859 .. 1621895 -  -6.6  -5.43974   AAAAGGAAATAAAAA   GT-CCTCTTCCCGATGG GCAT CGGTCAGGAAGAGGGAC    GGATAAACTATGATC  93 50
LPH39_RS06515 1618538 .. 1618550 -  -4.8  -3.53563   ACAGCGGCCTGGAAA                CTGG TGATT CCAG                TTGTCAAGTGGGTGT  55 29
LPH39_RS06510 1616081 .. 1616104 -  -8.2  -3.09834   CATTGGAGCAGGGAA          CCCAACAAGCG ATC CG-TTGCTGGG          TCAGCAGTTGCTTTG  64 283
        fabG 1610248 .. 1610262 -  -2.1  -4.64598   GAACTATTCGAAAAA               TGAGC ATGTG ACTCA               ATCGTATTGAGTACA  63 437
LPH39_RS06485 1607792 .. 1607803 -  -4.4  -3.55444   CTGTGATGGTGTAAA                GAAG AGCT CTTC                 TTCAAGATCATGAGC  52 300
        ccsA 1603464 .. 1603492 -  -3.7   -3.6543   GAAGCCGGCAAAATA        TCTGCCCAACGTT ATC AGCGCTTGGCTGA        AGTGGTTAAGGATAT  52 339
LPH39_RS06435 NONE
LPH39_RS06430 1592758 .. 1592768 -  -3.2  -3.53012   TTTTGTTTGGTGAAA                 CGGT TGG ACCA                 GTTTGCTATTTTCTA  50 41
LPH39_RS06415 1588829 .. 1588847 -  -3.1  -2.71011   ATGGGTGCGGAAGTA             TGGCCTT GCATG AAGGCGA             TGTGCATGGCAGCAA  41 522
LPH39_RS06380 1582468 .. 1582503 -  -7.7  -4.08485   CTGAGGCAAAGTAAA   GCGG-T-GCCAGCTCACT GGA AGCG-GCTGGCAAGCCGC   CAATTCCCCATTCGA  73 57
        pyrE NONE
LPH39_RS06365 1579086 .. 1579098 -  -5.5  -3.02144   GTATGGCTTTGAAGA                CGCAC TGT ATGCG                GCGGTGCGTTTGCTG  48 407
        radC 1574568 .. 1574586 -    -3  -2.64099   CGTCTGTATGAGAAG             CTTGCTGA CGT TCAGCTTG             TGCTCTGCTTGGCAT  41 73
        argS NONE
LPH39_RS06335 NONE
LPH39_RS06330 NONE
        speE 1567532 .. 1567559 -  -6.9  -3.53444   TCACCGCGTCTGAAA        CCGGCAGCCTT ATCCCG ATGGCTGCCTG         TGGAGGTGAGCCAAG  61 198
LPH39_RS06315 1566705 .. 1566720 -  -5.4  -3.55889   ATAGAGCAATGACAA              GGAGTA CGAC CACTCC               TACGAAGTAACCGAA  56 236
LPH39_RS06310 1565854 .. 1565869 -  -3.2  -3.72576   GCTGGTTTGAGTAAA              GAACCC GAAC GGGTTT               TAAGTGGAGTGCACA  53 64
LPH39_RS06300 1562684 .. 1562725 -  -7.4  -3.31183   AGAATCCAAATCCAA TGGCAGCGAGCGCTACCCTG GCGA CAGCGTAGCG-TCGCCAC-A GCATGCTCCAACTGG  62 65
LPH39_RS06285 1558728 .. 1558744 -  -4.3  -3.72695   ATGCGCCTCATGAAA              GTAGGCC AGA GGCTCAC              GATGAGAGCGGCTAT  55 70
LPH39_RS06280 NONE
LPH39_RS06275 NONE
LPH39_RS06270 NONE
LPH39_RS06265 1554571 .. 1554586 -  -3.2  -3.38991   ACGCGGCCAATAACA              CAGGCA TAGG TGCGTG               ATCCCATGATGCAGG  48 115
LPH39_RS06245 NONE
LPH39_RS06240 1546776 .. 1546790 -  -2.7  -4.42653   ACGGCATCTAGAAAA               GCCGC ATTGA GCGTC               TCACCACCTTTACTC  62 35
LPH39_RS06210 1538970 .. 1538985 -  -2.6  -3.70149   TGCATATCACGCAAA              TGT-TCC AGT GGACACA              TTGTGTGCGACTGAT  51 101
LPH39_RS06200 1534557 .. 1534585 -  -9.5  -3.05384   CGCTGTCCTAGTGAA        CTTGACGCCTCAC CAC ATGCGGCGTCATG        CAGGCTTGGGGTGAC  69 51
LPH39_RS06130 1515500 .. 1515510 -  -2.4   -4.1822   CGCGACGGTAAGAAA                 GCAG GTC CGGC                 AGACGGATAACGGTA  57 232
LPH39_RS06110 1512337 .. 1512352 -  -5.4  -3.05596   CACGTCGTGATGCAA              TCGCAA CATG CTGCGA               TTGTTGTCGATGTGT  51 91
        ilvD 1509390 .. 1509400 -  -2.4  -4.68724   TCATCCAAGATAAAA                 CGGC GTT GCCT                 GAAGCGAGCTACCCG  69 262
        rlmE NONE
        ftsH 1505356 .. 1505379 - -14.6  -2.85257   TTTCAAAGACACAAT          CGGCCCTGGA TTGC TCCAGGACCG           GGGTTGTGGAGGTAC  90 59
        folP NONE
        miaA NONE
         hfq NONE
        hflX 1501521 .. 1501532 -  -4.4  -3.37537   TATCTTAAAACTTAA                GTGT GGTA ACAC                 CGAGTGTCCGCCGTA  50 10
LPH39_RS06050 1500086 .. 1500099 -  -4.5  -3.35679   TGTTGGTACGCATAA               TGAGG GAAT CCCCA                TTGTTGTTGTAGCTG  52 80
LPH39_RS06045 1499318 .. 1499329 -  -4.4  -3.36492   TTCGGAACTGGATAA                CCTT GACG AAGG                 TTGTTCAGAAGGATT  50 278
LPH39_RS06040 1496227 .. 1496268 - -10.3  -4.90778   GCTACTGAAATAAAA CGCAGCAAGACGACGCACG GAATGA CGTGCGTCATCC-G-TGCG CAGTTATCGCTTACT 100 36
LPH39_RS06035 NONE
LPH39_RS06030 NONE
LPH39_RS06025 1491151 .. 1491167 -  -2.1  -3.86015   CATCGGTCTGATAAA              CATTGGC CAT GCCGCTG              ACTGCTGTTATTCGG  52 474
LPH39_RS06020 NONE
        ccsA 1483879 .. 1483907 -  -3.7   -3.6543   GAAGCCGGCAAAATA        TCTGCCCAACGTT ATC AGCGCTTGGCTGA        AGTGGTTAAGGATAT  52 339
LPH39_RS05960 1471118 .. 1471137 -  -2.9   -3.8969   CGATGCAGATAAGAA            CAGAGCAG TCGAC CTGCT-TG            CAACTAGTTTGGTGA  54 276
        ubiA 1468137 .. 1468153 -  -8.7  -2.64155   GCTTCGTCAAAGTCA              GCGTGTA GTA CACACGC              AACTTGCTCATTATG  61 446
LPH39_RS05930 1464273 .. 1464283 -    -4  -2.62735   ATATTTTTCAGATCA                 GAAT TGC ATTC                 AGAGAAGATATTGCC  44 82
LPH39_RS05925 1463656 .. 1463670 -  -4.2  -2.84574   CATCCTAAGCAACGA               CAATGC TCA GCAGTG               ATTTGATGACATTCC  45 165
LPH39_RS05920 1460786 .. 1460802 -  -6.6  -3.65353   TGAAAGGATCCGAAA              CGAAAC AGCGA GTTTCG              AACTTCTGAAGATTC  63 301
LPH39_RS05900 1454158 .. 1454174 -  -5.1  -2.80935   AGGTGATCGAGCACA              TGAGAGA CGT TCACTCA              AGGATTCTACCGTGG  49 461
        uvrD 1451815 .. 1451840 -  -8.3  -3.61178   GGCATGTATTTCAAA         CCTCCA-CTGCA CCT TGCTGGTGGAGG         CGCGGGTGGCCATCC  69 170
LPH39_RS05845 NONE
        mscL 1437749 .. 1437774 - -15.5  -3.20432   AGATACGCAATGGAA         CACCAGGTACC TGAA GGCACCTGGTG          TTCATATGCCCTATG 100 140
        pyrF 1433887 .. 1433899 -  -3.3  -3.62597   TGCACGGTTGAACAA                TTGCG TAT CGCTA                TTGAACAAGAACGAT  53 127
LPH39_RS12015 1424904 .. 1424925 - -11.6   -5.4505   GTGGGCAATAAAAAA           GCCGCCAA AATATG TTGGCGGC            TTTCAAGGATGCGAA 100 51
LPH39_RS05795 1423703 .. 1423715 -  -3.3  -3.64822   ATGGTTGGAGCGAAA                CGCGC GTG ACACG                ATGATCATTGGTTGG  53 51
LPH39_RS05790 1422678 .. 1422691 -  -2.3  -4.18018   TCGTTTCAGTGAAAA               GGGCT TGGG AGTCC                GTCTGACAGATAACG  57 142
LPH39_RS05785 1421028 .. 1421039 -  -2.2  -3.84246   GGTCGAATGATCAAA                CAGA AATG CCTG                 CCACTGGGTTGGCGG  51 328
        rpmH NONE
        rnpA NONE
        yidC NONE
LPH39_RS05680 NONE
        mnmE 1393864 .. 1393897 -  -7.4  -3.75332   ACGGTTTAAGGTAAA     CGACGAGATCTCCG GAAACT CGGAGACCTAGTTG      CTCTTGTCATATGCT  67 174
LPH39_RS05660 1389794 .. 1389812 -  -3.9  -3.92324   GGTTGCAATATGAAA            TGGTGGTG CTAA CAC-ACCA             CAGTAAGCACGTCCT  57 69
LPH39_RS05655 1388178 .. 1388225 -   -13  -3.73072   AACCGGGTCACCAAA GATTAG-GCATCAGGCTCAGCC GTTGAT GGCTGAGCC-AATGCACCAATC ATCCGCGATGCATGA  90 75
LPH39_RS05630 1383640 .. 1383658 -  -4.5  -3.56921   TGGAACACAACAACA            GCAC-GCG TGAT CGCCGCGC             AACCTTCAGAGAAGC  55 129
LPH39_RS05620 NONE
LPH39_RS05615 NONE
        coaE 1377591 .. 1377627 -  -8.1   -2.7263   AGGACGCCGCCAAAC   TGTTCCAACGTGGGTA TCGCGG TACCCACGCAGG-ACA    CTCGCAAGGTGGTGG  57 448
        thrS NONE
        infC 1367869 .. 1367886 -  -7.7  -4.17296   CTTCACACAGAGAAA             CCAGCTC CAAA AAGCTGG              GCTCTTAGTATCCCA  75 104
        rpmI NONE
        rplT 1366992 .. 1367020 -  -8.2  -3.37537   GACTCTAAAACGCAA       CGTGG-GAAGGAC TCAT GCCCTTCCCCACA        TGTCTGCACTATATA  66 161
        pheS 1365839 .. 1365852 -  -3.1  -4.55826   GGTAAAAGAGCAAAA               TGG-GC TAA GCACCA               CCGAAATACGGCAAG  65 62
        pheT NONE
LPH39_RS05555 NONE
LPH39_RS05550 1362647 .. 1362659 -  -6.2  -2.73875   CCCCGCTCAACAGCA                CGCC GGTGT GGCG                GCAGGGCGCGATTAT  51 125
LPH39_RS05545 1362298 .. 1362308 -  -3.2  -4.08767   CTGATCCTCTGAAAA                 GCAA ACA CTGC                 CATCTGCACGGGCAA  58 277
LPH39_RS05540 1361203 .. 1361216 -  -3.7   -3.6106   GGCAACAGTTTCAAA               CGCGG GATG CCGAG                TGGCCACGGTGCATT  50 458
LPH39_RS05520 NONE
LPH39_RS05515 1354128 .. 1354142 -  -7.1  -3.59979   CTGCTGGACGCCAAA               CTGGC ACACG GCCAG               CTGCGCGTGCGGGTG  60 119
LPH39_RS05505 NONE
        tsaE NONE
LPH39_RS05495 1348798 .. 1348818 -  -6.1  -3.55761   CAGGCATCCGGGAAA            CCCGGAT CAACGGC ACCCGGG            CTCCGGTTCACTCCA  59 68
        mutL NONE
LPH39_RS05485 1345812 .. 1345822 -  -4.6  -3.21395   ACCGCGGTCATAACA                 GGCC ATT GACC                 GAAGCAACGACCATA  50 101
LPH39_RS05465 1342173 .. 1342195 -   -12  -3.14931   CCCACCCGTCAGGAA           TCGCCAGCCA CGG TGGCTGGCCA           AGCTGAGCAAGCACC  82 525
LPH39_RS05455 NONE
LPH39_RS05450 NONE
LPH39_RS05445 1339924 .. 1339955 - -11.7  -2.63301   CACATCGGCACATCA      CCGCTCT-CGTGAG CAAAC CTCACGTAGAACGG      CCATGACATAGCGCG  75 13
LPH39_RS05440 NONE
LPH39_RS05435 1336665 .. 1336691 - -13.1  -3.25282   ATGAAGCACCAGCAA        GGCAACGAC-CG GGCT CGCGTCGTTGCC         TCCACAGCAAAGCAA  84 315
        thiS NONE
LPH39_RS05415 1333622 .. 1333637 -    -4  -3.10343   ACATCCATCATCCAA              CCAATC CCTC AATTGG               GCTGGACGCCGCAGC  48 2
        trmB NONE
LPH39_RS05405 1330691 .. 1330709 -  -4.5  -3.75153   TGCCTTCAAGGTAAA             CACGCCT AAATG ATGCGTG             TATAGCCTCTCATCA  57 306
LPH39_RS05400 1328440 .. 1328471 -  -2.2  -3.05384   TGCGGTGCCAGGCAA      TCGGACCACCCTGTG TCG CACATGG-GTTCCCA      CTCACAACCTGAGAT  42 27
        rsmH 1327467 .. 1327491 -  -6.3  -3.36878   ACAGAACAATCAACA          GAAGGCGGCTC ATT GCACCACCTCC          AACCTATCCAACTTC  59 10
        ftsL NONE
LPH39_RS05385 NONE
LPH39_RS05380 NONE
        murF NONE
        mraY 1321409 .. 1321422 -  -2.3  -4.15044   GCCTGGCGCAAGAAA               GCGTT CATC AGCGC                ACCTTCAACGTCGCC  57 19
        ftsW NONE
        murG NONE
        murC NONE
LPH39_RS05350 1316555 .. 1316565 -  -3.2  -3.47841   ACACGCACATCACAA                 CGCT GCC AGCA                 CAACATGCACACCCG  50 75
LPH39_RS05345 NONE
        ftsA NONE
        ftsZ 1312804 .. 1312840 -  -7.2  -3.10727   CAACAGACACATACA    GCGGCCAAAACCACTG AGACG CAGAAGTTATGGCAGC    ATATAAAGCGCGCGT  60 223
        lpxC 1311663 .. 1311673 -  -6.8  -2.74741   ACGAGATTGGAACCA                 CACG ACC CGTG                 GCATCGTAACCGGTA  53 117
LPH39_RS05320 1310126 .. 1310144 - -12.4  -4.72272   CGCCGTCAGCAAAAA             CAGGGCGC ACT GCACCCTG             TTCGTGGTCAATCCA 100 92
        secA 1307266 .. 1307280 -  -3.5  -3.77832   CCTCAAAGCTAATAA               GCCTC CCATC AAGGC               ATCTCTGAAGATCGG  53 52
LPH39_RS05300 1301797 .. 1301807 -  -4.6   -3.1739   ACATGATGCGAGTAA                 GCCC GTA GAGC                 GTCGTTGCGTGTATG  50 230
LPH39_RS05290 1297227 .. 1297241 -  -8.6  -3.10464   CGATCAAGGGCAAGA               TCCAGA AGC TCTGGA               GCGCATATGGGTCAC  60 189
LPH39_RS05280 1294003 .. 1294013 -  -6.8   -3.9534   AGTCACATCCAGAAA                 CAGG ACA CCTG                 TCGGACCCAAGGAGG  66 109
LPH39_RS05255 1290056 .. 1290078 -   -12  -2.52279   GCAGCAAACATACAC           CGCCGTTCCA ATC CGAAACGGCG           CTCCCACATCGTGGA  78 116
LPH39_RS05250 1288245 .. 1288261 -  -4.3  -3.44319   TTGAATTGACCAGAA              CGCCACG CGA CACGGCA              CGCAGCACCACAGCG  52 42
         pyk 1286031 .. 1286043 -  -3.4  -3.28447   GCATCGACCACAACA                GCAA AATCA TTGC                TTCCCCAAGATCTCC  48 75
LPH39_RS05240 1285747 .. 1285772 -  -3.2  -3.54129   CACATCGGTTGCAAA         CAGCACCCTA CCTAAC TAGGGAGATG          CAACCAGCACCCACC  50 7
LPH39_RS05235 NONE
LPH39_RS05230 1284255 .. 1284286 - -15.9  -2.64144   GCGCCATCTAAACAC      CGAAGGCACCGGC ATCGCA GCCAGCGCCTTCG       CCACAATGACCAGAC 100 55
LPH39_RS05225 1282502 .. 1282535 -  -7.3  -4.11484   GCGAAGTGCTGAAAA     TCGCTCGCCCGGACG TCAA CATCACGGCTAGCGA      ACCCGCCAGCGCAGC  71 494
LPH39_RS05210 1279279 .. 1279314 -  -3.4  -4.72497   GACTCATCAAGAAAA    TACGTGGATCTCAA-AC AGC GTATTGAAACCCACTCA    ATTGGTGATGGTCTG  69 23
LPH39_RS05195 1277180 .. 1277222 -    -4    -3.922   AAACGGGGAAGTAAA GCACGCTAAGCCAGAAACAG TGT CCGTCTCTTGCTCAGATGGC TTCCCGTATCCGTCT  57 17
        lptD NONE
LPH39_RS05170 1269528 .. 1269542 -  -2.8   -2.9155   GGTTGCAACATGAGA               TCAGTG CTT CATTGA               GGACGGTGACGTGAC  42 11
        pdxA 1268402 .. 1268418 -    -8  -2.67515   GTCATGACCACAGCA              CCAAGC GGGTA GCTTGG              TATCGGCTACTCCTG  58 138
LPH39_RS05115 1251452 .. 1251474 -  -4.1  -3.04054   AAACAACACTACAGA          CACCGGCAGC AATC GC-ACCAGTG           GGCACCAGTACATAA  47 155
LPH39_RS05110 1249996 .. 1250010 -  -5.6  -2.72052   AAATCAATTACAGCA               TGAGCG GGA CGCACA               GATATGGTCTCTTAC  48 37
         alr 1248566 .. 1248580 -  -3.4  -3.53811   CTCACCCTTGTCAAA               CCCGAC ACT GACAGG               TCACACCCACGCCAT  50 366
LPH39_RS05060 NONE
LPH39_RS05055 1236244 .. 1236295 -  -7.5  -2.94416   CACCGCTACCAGAGA CGCTGTGTACATCAGTAT-GGCAGT AGCT ACCACCGACACCGATGGACACA-CG GTCCGCATACGCGTA  59 54
LPH39_RS05045 1233842 .. 1233866 -  -4.9  -4.09685   TCGTATTCCCCAAAA          GATGGCACCCG TCA CACGTGCAATC          ACGACGACAGTCAAC  62 51
LPH39_RS12000 1231982 .. 1232013 - -10.8  -3.58256   GACATTCAAACAACA      CCTTCTGGTTCGGC CATC ACCGAGCCAGATGG       TCGATGTCCGTCTGT  79 235
LPH39_RS05020 1225976 .. 1226002 - -17.4  -3.49102   ACACGTTGCACACAA         CAAAACGGGCCC TAA GGGCCCGTTTTA         TTACGCTGTCATTAG 100 56
LPH39_RS04995 NONE
LPH39_RS04990 1219269 .. 1219295 -  -4.5  -4.81212   CCCATTACAACAAAA        CCAACAGCAGTA CAAA TAC-GCTGTTGC         AACACTTTTCACGTC  73 504
         can 1218113 .. 1218124 -  -2.2  -4.05446   GTTCTGAACCATAAA                CGGT TGCA ACCA                 GTCTGGACGTTGCTG  55 286
LPH39_RS04960 NONE
LPH39_RS04955 NONE
LPH39_RS04950 1207457 .. 1207470 -  -4.5  -3.30124   GCTGATCGTCGACAA               TACGG TCAT CCGCA                ATATCCCGCAGCATC  52 304
LPH39_RS04940 1205040 .. 1205064 -  -2.8  -2.75382   TACTCCAGGCAAGTA          CACTCATTGC ATCCA GGATTGAGTG          CGCTATCCGACTGAA  42 128
LPH39_RS04935 NONE
LPH39_RS04930 NONE
LPH39_RS04925 1204157 .. 1204177 -  -7.5  -3.54543   ATGTAGCCTGGGAAA            CTGACCAGC TTG GCAGGTCAA            TGTCCCGTTTAGTAC  64 132
LPH39_RS04920 1203220 .. 1203236 - -10.1  -2.70143   ATCGGAATTAGAGCA              CCGGCCT TCT AAGCCGG              CGGTTACAGGTTCGA  62 355
LPH39_RS04895 1201866 .. 1201876 -  -3.2   -4.2535   ACATCATATGGAAAA                 CGTC AGC GACA                 CATGCAAACGGCGCG  60 254
LPH39_RS04835 1190382 .. 1190399 -  -6.9  -3.14132   GTGGTCCTCTAGCAA             TGCCGGC GTAC GGCGGCA              TCTGGGTGTGTTTGG  57 60
LPH39_RS04830 NONE
LPH39_RS04825 NONE
LPH39_RS04820 NONE
LPH39_RS04815 1182796 .. 1182808 -  -3.3  -3.54459   CCAACGTTGGTGAAA                CTGGC GCC GCCAC                ACTGGCAAGGGACAT  50 417
LPH39_RS04805 NONE
LPH39_RS04800 NONE
LPH39_RS04795 1181630 .. 1181644 -  -3.5  -5.10933   TCACGGAAAATAAAA               CATGC TACGT GCACG               CAGCGGCTGGCCACC  75 143
LPH39_RS04790 1180584 .. 1180612 -  -9.5  -2.87132   GCGCTGCTGGACATA        TGGCACGCATCCG ATG CAGCCACGTGCCA        TCTGCGTGCTGATGC  63 197
LPH39_RS04775 NONE
LPH39_RS04770 NONE
LPH39_RS04765 1179160 .. 1179171 -  -7.2  -2.71243   TGGATAGAACAACAG                CGGG TACT CCCG                 TCACATCTGCATATG  56 271
LPH39_RS04755 NONE
LPH39_RS04750 NONE
LPH39_RS04745 NONE
LPH39_RS04740 NONE
LPH39_RS04735 1176490 .. 1176513 -  -6.7  -2.70932   GTTGCCCTTGAAGGA          CACCCGCGGC CTGGC GCC-CGGATG          CTTGCGGACATGCCG  50 201
LPH39_RS04725 NONE
LPH39_RS04720 NONE
LPH39_RS04715 NONE
LPH39_RS04710 NONE
LPH39_RS04705 1169561 .. 1169615 -  -6.5  -3.05384   CGCGGTGTGACGCAA CACGATCATGTCATCGATGTCTGAAT GTTC ATCCATCCACCGAGG-CAAGATCGTG CCGCAGCAGACATGC  55 273
LPH39_RS04700 NONE
LPH39_RS04695 1167853 .. 1167869 - -10.1  -3.13522   AGTGCGCCATGAAGA              CAGCAGC GAC GCCGCTG              ATGCGCGAGGCCAGG  73 200
LPH39_RS04690 1167602 .. 1167613 -  -2.2  -2.56715   AGGCCGATCAATCTA                TGAC GCTG GCCA                 GGATGCTGACACGGC  39 6
LPH39_RS04685 NONE
LPH39_RS04680 1165782 .. 1165798 -  -7.9  -3.21924   TGACTGTGGAGAACA              GCAGCGA CAA TCGCAGC              TCTCTGAGTATCTCT  62 494
LPH39_RS04670 NONE
LPH39_RS04665 NONE
LPH39_RS04660 NONE
LPH39_RS04655 NONE
LPH39_RS04650 1152047 .. 1152091 - -10.6  -3.08934   GGATAGACGGCAATA CCCGCACCGGCGCCGC-CCCC TTTA GGGACACGGCACGGGTGCAGC AACACCGCTCACCTC  72 69
LPH39_RS04645 NONE
LPH39_RS04640 NONE
LPH39_RS04635 NONE
LPH39_RS04630 1149170 .. 1149198 - -13.9  -2.75064   GGGCTGATTTAACTA        GCCGCTGGCAACA CCA TATCACCAGCGGC        CTTGATGCTTATCCA  88 34
LPH39_RS04625 1148327 .. 1148348 -  -8.1  -3.08679   TGCTTCGATTCAACA           GCGATGCTTG CAG CAA-CATCGC           ATGCAAGCACCTAAA  60 490
LPH39_RS04615 NONE
LPH39_RS04610 1147480 .. 1147492 -  -3.3  -4.63932   CAGCCTTGAATAAAA                CCCCA GGA TGGGT                ATTCACCGTCACACT  66 127
LPH39_RS04605 NONE
LPH39_RS04600 1146217 .. 1146238 - -10.1  -3.85704   CCACCAATCACTAAA           CCCCAATCG TTCT CGGTTGGGG            TTTTTTTCTTGCCAG  82 367
LPH39_RS04575 1137747 .. 1137761 -  -7.8  -3.74158   TCAATGACATTGAAA               GACGCG ACT CGCATC               GAAATCCCTGCCGGC  68 364
        gltB NONE
LPH39_RS04565 1131258 .. 1131278 -  -8.9  -4.46233   CGAATGGGAAACAAA            CATGCGCCC CAG GGGCTCACG            CGATGCCGGCAACGC  83 133
LPH39_RS04535 1123444 .. 1123454 -  -5.4  -2.94708   GAGTCTGCAAATAAC                 GATC ATT GATC                 CGTGACACACACCCC  51 59
LPH39_RS04530 1121715 .. 1121725 -  -6.8  -3.60296   CACGTTCATCCGAAA                 CAGC ATG GCTG                 TCCACGATCTCCGCA  61 183
LPH39_RS11995 NONE
LPH39_RS04510 1110791 .. 1110805 -  -6.4  -3.14878   CTCTCCAATCCAACA               GAGCAG TTC CTACTC               CACCTTCATATCTGT  57 425
        rhlB NONE
        ftsE NONE
        ftsX NONE
LPH39_RS04480 NONE
         ung 1102846 .. 1102857 -  -2.2  -2.74322   TTTAACTTTTTAAAG                CCCT ATCT AGGA                 TTGCCATGAATCGAT  39 66
        rpoH 1101595 .. 1101615 -  -4.7   -3.7282   CTAGCCTATGAATAA            CACGCTTAT TAA ATAACCGCG            CCATCCCCCCCAAAA  57 298
LPH39_RS04460 1097336 .. 1097351 -  -2.4  -3.67648   ACACAAACAACAACA              CGTACG ACGG CGCTCG               GTTCTGATCATCGAC  50 33
LPH39_RS04455 1096529 .. 1096542 -  -5.3  -2.92175   TTGGAATATATCACA               CTTTC ATCA GAAAG                TAGGGAACCCAAGCC  51 276
LPH39_RS04450 1095038 .. 1095059 -  -3.7  -2.82635   ACGCCGATCAGCATA           GCG-GGTG TCGGCAT CACCGCGC           TGTGACTGGGAATTT  43 39
        sppA 1093031 .. 1093049 -  -6.7  -3.19285   AAAGACAAAAGCAGA            GTCCGGCC CGAA GGCC-GAC             ACACGGAATCCAATC  57 64
LPH39_RS04440 1090318 .. 1090330 -  -4.1  -4.46215   GACATTCAAAAACAA                TCGTC AGT GACAA                CGAAAATTATTCCGT  65 235
         rep 1087435 .. 1087445 -  -6.8  -2.63715   ACCGACTCCACAGTA                 CGCA CGC TGCG                 ATGAGCACCCTTACG  53 209
LPH39_RS04425 1083781 .. 1083796 -  -6.2  -2.61322   ATATTTTCCAAATAT              TGATCA AAGA TGATCA               GCATACATTTCCATG  51 503
LPH39_RS04420 1080063 .. 1080095 - -16.4  -4.55826   TGGAAAATATTAAAA      GCTCACCTGAAGCC TCATC GGCTTCAGGTGAGT      TAAATGCTGATGATC 100 57
        purE NONE
LPH39_RS04395 1073737 .. 1073754 -  -2.7  -3.47349   CCGGGAAACGTACAA             CACCA-TG GGA CACTGGCG             TAGCGCTGCCAGGCA  49 200
        grxD 1072430 .. 1072444 -  -8.5  -3.41839   TATACAGACGTATAA               CCCGG GTCCG CCGGG               GATACTGCGCCAATT  66 493
LPH39_RS04385 1071228 .. 1071255 - -10.6  -2.75993   CGACGGATAGACAAT        CGCCACACTCCA CCAA TGGAGTATGTCG         CGATTGTCAACACGG  71 422
LPH39_RS04380 1070603 .. 1070617 -  -2.8  -3.09648   GAAGAGAGCGCAACA               GCCT CTTCAGC AGGC               GTGAGAATACTCAAG  45 115
LPH39_RS04375 1070090 .. 1070101 -  -4.4  -2.55015   ATCTTAGTCAAGGCA                GCAA AGCA TTGC                 TTTATAAGTCGGTAG  44 27
LPH39_RS04325 1062294 .. 1062322 -  -7.3  -3.29144   TCACTTCCCTGACAA        GACGCGCGCATTC GAG GATTGCGGACGCC        AGCCGACCACGCACA  59 422
LPH39_RS04310 1060717 .. 1060729 -  -6.9  -3.75153   TGGCCGCAAGTCAAA                GCGGC ACT GCCAC                AACTGCGGCACCTGA  63 168
LPH39_RS04300 1059267 .. 1059282 -  -6.8  -3.53444   GTAGCTCCCTTTAAA              GCGTCG CAAG CAACGC               CGCAAACGCCTGCGC  61 5
LPH39_RS11990 1058451 .. 1058468 -  -3.3   -5.0538   CGCGATGGGAAAAAA             CAGCAGC AGAA GCCGCCA              CACGGAGCGCCATGT  75 285
       rlmKL 1055731 .. 1055756 -  -7.5  -3.21395   ACGCCCCGTAGAACA         GCACTGACGCC ACAA GCCACCAGTGC          GATGGTTGCGACCGC  60 491
LPH39_RS04290 1054387 .. 1054397 -  -8.2   -3.4052   CTGGAAGCGAATTAA                 CGGC ACT GCCG                 GGTGTTCTCACTCAT  66 37
LPH39_RS04275 NONE
        lolB NONE
        ispE NONE
LPH39_RS04260 1047831 .. 1047843 -  -4.1  -3.49419   CTTTCGTAGAAAAAC                CCAAT GAA ACTGG                CAGGGGCGGTAGGAT  52 23
LPH39_RS04255 1046676 .. 1046689 -  -5.9  -3.97406   TTAAAAGTTGAGAAA               CCGCC TCGC AGCGG                CAGAACGCGACTCTC  66 87
LPH39_RS04250 NONE
         pth NONE
        ychF NONE
LPH39_RS04235 NONE
LPH39_RS04230 NONE
LPH39_RS04225 NONE
         tuf 1042438 .. 1042466 -  -9.5  -4.08557   TTTTTGAAATAACAA        CGGCGAACCGA GGTTCAA CCGGCCCGCCG        TTTGCACGAATCCAA  81 72
LPH39_RS04215 NONE
        secE 1041883 .. 1041893 -  -3.2  -3.31196   TCAAAGCGACAGGAA                 CCAC TGC GTGA                 GCTTCTGTATCACGA  48 0
        nusG 1041191 .. 1041203 -  -4.9  -3.57561   CTTTAATCGTCTAAA                TAAAG ACT CTTTA                TGTGCCAACAAACCC  55 119
        rplK NONE
        rplA 1039772 .. 1039811 - -10.8  -3.98857   CAAGGAAAAAATTAA  GCACTCCACAGACTTAAGC GTT GCCAAAGCC-GTAGAGTGC  ACCTGCGATCTTTGA  87 181
        rplJ NONE
        rplL 1038446 .. 1038472 -  -6.5   -4.4715   CTTCAAGGGATAAAA        GGCCGGGAGTTG ATAT CCAC-CCCAGCC         TTCAATGCATCGTTA  74 68
        rpoB NONE
        rpoC 1029580 .. 1029602 -  -9.1  -4.35327   GCATTAAAAAGGAAA           GCAGGGAAG TGAGG CTGCCCTGC           CGTTAACCGAACCAG  83 198
        rpsL NONE
        rpsG 1028650 .. 1028664 -  -4.3  -4.88918   GGAGTGCAAAGAAAA               CTCTT TACTC AAGAG               TCCATAAATCACCAG  74 34
        fusA 1026360 .. 1026370 -  -4.6  -3.26712   ATTTTTAATAACACA                 GCGC CCA GCAC                 AAGAGCCGTTGTTTA  50 72
         tuf 1025044 .. 1025072 -  -9.5  -4.08557   TTTTTGAAATAACAA        CGGCGAACCGA GGTTCAA CCGGCCCGCCG        TTTGCACGAATCCAA  81 72
        htpX 1022044 .. 1022056 -  -4.1  -2.79557   AATTAGCTCAACAAT                GAACC ACG AGTTC                TAATACAAGCAGCCC  45 418
LPH39_RS04140 1018194 .. 1018225 -   -16  -3.00039   TACGCAGAACTAAAG      GAAACGCCAGAAGC GTGA ACTTCTGGCGTTCC       GAGAACAGTATCTAA 100 53
LPH39_RS04135 1016056 .. 1016070 -  -8.6  -3.69506   GACGCGAAAAGAATA               GATTGC ACA GCAATC               AAGCAACCCAACACA  71 250
LPH39_RS04130 1013797 .. 1013809 -  -4.7   -4.1552   CACTGTCGCAACAAA                GCCGC TTT GCTGC                TGCACTTGGCAAGCC  61 332
LPH39_RS04115 1012285 .. 1012310 - -11.1  -4.36262   ATACCGACATGAAAA         GAGCCGAGATC GCAC GTTCCCGGCTC          TTAGGGTGACCGAAA  91 59
LPH39_RS04105 1008015 .. 1008029 -  -6.4  -3.47762   AACATTGATCAAACA               CACTGT TAC ACAGCG               CCACCCAAATAAAGC  61 140
LPH39_RS04100 1006859 .. 1006873 -  -7.2  -3.88884   GTAATGAAACAAACA               TGATCT ACC AGATCA               AAAGCGACGTACAAG  69 382
LPH39_RS04090 1001732 .. 1001751 -  -2.7  -3.86202   CTGGATCAGACTAAA            GACGGTC TAACGC GGCCGCC             AAGTCCTCCGCCAAC  54 1
LPH39_RS04070  999186 ..  999218 -  -7.7  -3.07994   TGCAACGGCATTCAA      TCCACCCAGCCATAT GGC AAACGACTAGGCGGA      TAGAGAATTAACCAG  60 107
LPH39_RS04065  997190 ..  997204 -  -4.2    -3.214   CTCACCACAGCAAGA               TCGTTC TTC GACCGA               ATCTACATCCATATA  48 515
LPH39_RS04045  992675 ..  992700 -  -2.6   -4.3953   TCTAACTAGAATAAA         TCCCACAACA CGTGTT TGTTGTGACA          CAGACTCGTCAATCT  62 336
LPH39_RS04030  988555 ..  988568 -  -3.8  -2.57541   ATCGACAATCAAGAC               GCGT TTTTGC ACGC                TCAGGTACCGCCTTA  44 105
        phoB  987821 ..  987862 -  -4.5  -3.23899   CTTGAACCAAGCTAA CCGAATACGGTGGAGTGTGG AGA CGATACTC-ACGGTATTCGA CGGGATACTCAGATC  50 40
        phoR  986410 ..  986421 -  -7.2  -3.66727   GAATTAGACATAGAA                CGCC TTGG GGCG                 AAAGATATAGGAAGA  67 114
        ppk1 NONE
         ppx  982553 ..  982590 -  -7.2  -3.65522   GACTGATTCGAACAA  CTGAC-TCTCTGCCCATG CCCG CATGG-CAGATACGTCAG   AAATCTCGCTCGCAC  67 149
        lpxH  980609 ..  980621 -  -4.1  -3.69364   ATTCAACACAGATAA                CCAAA ATA TTCGG                CAACGATAACCGCGT  55 260
LPH39_RS03985  976417 ..  976435 - -13.2  -2.73799   TGTATAAACAATGCA             CGCAGATG ATG CATCTGCG             CACTGGTATTTTCTG  84 139
        rpsB  972016 ..  972029 -  -8.1  -2.81464   CCACCAGGGAGGACA               GGCGA GAAT TCGCC                AGTCCTTATTATGTA  59 148
         tsf  971031 ..  971048 - -10.5  -4.07306   ACACGGAATTACAAA             GCGGCGG CATA CCACCGC              TCCTCGGAACAAACA  85 58
        ispG NONE
LPH39_RS03940  966164 ..  966174 -  -3.2  -3.55122   TACGATTCAAATCAA                 GCAA CTC TCGC                 ACCTTGATCCACCAG  50 413
LPH39_RS03900  957596 ..  957619 - -14.6  -2.90212   TGATTAGGGCAGACA          GCTCC-CCGGC AAC GCCGGTGGAGC          AAGGGCTCCCCGCCA  90 185
        rpsF NONE
        rpsR NONE
        rplI  956225 ..  956254 - -14.3  -5.01845   GACAACAACGAAAAA       TGCGACGGGCGCT TTGA AGCGCCCGTCAGA        CACGATGGAGGCAAC 100 46
         smc NONE
        zipA  951560 ..  951575 -  -4.6  -3.72909   TCAAGCAACACAGAA              GCCTGA GTGA TCCGGC               TGATGAGACATAGGG  57 216
LPH39_RS03870  951174 ..  951186 -  -4.8  -3.82031   TCAATCACCAGGAAA                CGCT TTGAT AGCG                TGCTTGCCAATCAGG  59 108
        ligA NONE
LPH39_RS03860 NONE
        epmA  946491 ..  946501 -  -8.2  -3.18467   AAACGTCCAAGTCAA                 GCGG CAC CCGC                 GCAGATCAGGATTCC  64 106
LPH39_RS03850 NONE
        mtnA  944314 ..  944326 -  -3.3  -2.64144   CCGTCATGTAAAGAG                GCGCT ACA AGCTC                GCAAGCAACCGCTGT  42 191
        gyrA  941543 ..  941556 -  -9.5  -2.78384   GCGGGGCTCAGGACA               CCGGC ACAT GCCGG                TGTCCTCATGGACTT  68 40
LPH39_RS03835  938830 ..  938862 -  -4.8  -3.14132   TGCGGTCTGGATGAA     GCCAGACCTCGCCAC ACTG ATAGCG-GGTCCGTC      AATGCGATGCGGGCG  50 24
LPH39_RS03830 NONE
LPH39_RS03825 NONE
LPH39_RS03820 NONE
LPH39_RS03815 NONE
LPH39_RS03810  924220 ..  924232 -  -4.1  -4.61852   AACACGACAAACAAA                GTCAA CGT CTGAC                CTACCCAAGAAGGCT  68 385
LPH39_RS03765  914547 ..  914558 -  -5.8   -4.3014   AGACACCCACCAAAA                CCGA AATC TCGG                 GCCTGATCGAACGCA  69 522
LPH39_RS03745  911511 ..  911525 -  -6.4  -3.20991   CCGAACGCAATGCAA               GGCTAT CAA ACAGCC               AAGTCACGTAATTTC  57 16
LPH39_RS03740  910982 ..  910997 -    -4  -3.96224   TAAAGCACCTACAAA              TGGCATG CAT CA-GCCA              TAGATATCCAGCCGT  57 73
LPH39_RS03735  908495 ..  908513 - -13.2   -3.2218   CTCAAGAGCTATCAA             CGCATCTG CTC CAGATGCG             AGACACTCGCTGCCA  88 352
LPH39_RS03730 NONE
        feoB NONE
LPH39_RS03720  904057 ..  904068 -  -2.2  -3.76775   TTCAATACACTGAAA                CACT CTGG AGCG                 GACATCACCTGATGA  50 289
        rluD  901205 ..  901222 -  -4.1  -3.10715   GGCATTAGCACCCAA             GATGGAA GCGT CCCCATC              TCAGCGTCACTCCCG  48 32
        pgeF  900199 ..  900216 -  -9.1  -2.73969   ATCCATTAAAGCAAC             GGCGCCA ATGC TAGCGCC              CCTCATGACTGACAA  63 248
LPH39_RS03700  899349 ..  899375 - -14.4  -3.64283   CAAACGCTCTAACAA         CGGCCCGCTGGA GCG TCCAGCGGGTCA         TCATCCAGATACAAA  95 175
LPH39_RS03685 NONE
LPH39_RS03680 NONE
        nrdR  892197 ..  892209 -  -2.6  -3.74251   CATATCCCCATCAAA                GCAG GTAAG CCGC                TCGACTTCGGCCAAA  51 109
LPH39_RS03670 NONE
        ribD  890516 ..  890532 -  -5.1  -3.76641   ATGCCAATATGGAAA              TAGCACA TTG CGTGCCA              GCCGATACAACACTC  59 292
LPH39_RS03660 NONE
        ribB  888384 ..  888402 -  -2.3  -3.25479   TGAGGAAACATTTAA             TCGACAC GCTGG GGGCCGA             CCGGAGCCTGGCCGC  43 3
        ribH NONE
        nusB  887370 ..  887381 -  -7.2  -3.06991   TAGTACGGGGAAAAT                CCGC CTTT GCGG                 GTCGCTGCTACGCGC  59 62
        thiL  885885 ..  885918 -  -4.5  -3.79874   TGTCAGAGAACAGAA     CGCTG-CACAGACATC GTG GATGAATGTGACGGCG     TCAGCCCGGTGCTGG  59 467
LPH39_RS03635  884546 ..  884573 -  -7.1  -2.81547   TCCGGATATCAATGA       CCAGG-GCACTCA TGCT TGAG-GCACCTGG        ACTTGGAGGTCAACC  57 7
LPH39_RS11980  884041 ..  884059 -  -6.7  -2.80816   TGGCGATCGACGACA             GAGTCCA GGAAT CGGACTC             AATGCCTTGGCTACC  54 188
LPH39_RS03625  883176 ..  883187 -  -5.8  -3.61589   GGAATAGGAAACGAA                GCAG TACA CTGC                 TCACCACTGTCGTTA  59 268
        dapA NONE
LPH39_RS03600  878311 ..  878342 -  -8.6  -3.57106   CTTAAGCCAAAGCAA      GACGATGCCCCAGA ATTT CCGGGGGCATTGCC       ATTTATCTTATGATC  69 92
        uvrB  874954 ..  874966 -  -4.7  -4.04023   ACTAAGTAACAACAA                GCTCG CCG CGTGC                AGAAAAATGCTTGAC  62 49
LPH39_RS03585  874277 ..  874311 -  -3.6  -4.98857   ACTCAATGACAAAAA     GATCAAATACGGCAGT ACA ACTGCTATATTGCATC     CATGCACTGAGGAAC  73 520
LPH39_RS03580  873418 ..  873431 -  -5.3  -3.20901   ACTGTAGCAATCTAA               CACTT ATTA AAGTG                TCTTAATAGACGATT  52 309
LPH39_RS03570  869463 ..  869482 -   -15  -5.42975   CGACACAAACAAAAA            CCCCGGTC TAAT GACCGGGG             TTTTGCGGGTCTAGC 100 50
LPH39_RS03545  856065 ..  856079 -  -3.5  -3.08187   AAATATGGCATCGAA               CGCTC CGTAT GAGCA               GTGCATGCTTGAAAG  45 159
LPH39_RS03540 NONE
        recG  852988 ..  853003 -  -5.4  -3.63805   ACTGTACAGCTCAAA              GCACGT GGCC ACATGC               TTCATCAACCCGATA  59 406
LPH39_RS03530  850997 ..  851021 -  -2.7  -4.64766   CTCATAGCTCAAAAA          GTTGCGTTGAC ATG GTCTCTGCAAC          TTCTCTCAGGTTAAT  65 81
LPH39_RS03490 NONE
LPH39_RS03480  834775 ..  834795 -  -3.9  -3.75657   GCAAAGATGCAAGAA            GCACATGCA ATG CACAGGTGC            GGTTCTTTCTGGTCA  55 352
LPH39_RS03460 NONE
LPH39_RS03455  827889 ..  827899 -  -5.4  -3.04398   GCGGGGTTTCAAAAG                 TACC AGC GGTA                 TAGGTGATTTTTTAG  51 53
LPH39_RS03435  819854 ..  819869 -    -4  -4.31433   CATCTTCACAACAAA              TGCTGT CCAA ACAACA               CCGTCTGGTTCTCGA  65 0
LPH39_RS03430  819483 ..  819499 -  -5.1   -3.1544   GCACATGACACCGAA              CTTCTGG CAT CCAGAAC              AGATCTTGCACATCT  52 54
LPH39_RS03420  818217 ..  818228 -  -5.8  -4.69415   ATCAACACAAACAAA                CCTG CAAT CAGG                 GCATCAGTCATTGAC  78 212
        clpB  815065 ..  815084 -  -3.7  -4.16921   CAACAATCGGTAAAA            GTTATTT TGGTTG AAATAAC             CACACTCTTTGGGCA  60 81
LPH39_RS03395  811305 ..  811328 - -13.8   -5.1356   TCTGACTAATAAAAA          GCGGCGCCCC TTGC GGGACGCCAC           TCTGAAAAACACACC 100 105
        dusA NONE
LPH39_RS03385 NONE
LPH39_RS03380 NONE
LPH39_RS03375  803827 ..  803842 -    -4  -4.41348   TGCCTGTGAAATAAA              TCAGAC TTCG ATCTGA               CAAAATACATGACAT  65 440
LPH39_RS03370  802816 ..  802833 -  -5.5   -3.6869   GAGATCAATGCCAAA             GATGAGG ATAA CCTCAAC              ACAAGAAAGAGTAGA  59 203
        metK  799280 ..  799292 -  -4.9  -3.97709   ACTAGCGAAGAATAA                TTGAA CAT TTCAA                CCTAATACCCTCCCC  62 151
LPH39_RS03345  797604 ..  797616 -  -2.7  -3.21934   TCTCCGGTAGAAAAT                TACAA GTA CTGTA                GCTTTCCTGATCTAC  45 73
         bfr  796878 ..  796891 -  -5.9  -3.73775   CGCAGCTGCAGGAAA               GCGCC ACAA GGCAC                GAAACTAATCTACTG  61 246
LPH39_RS03320 NONE
LPH39_RS03315 NONE
        erpA  790237 ..  790252 -  -6.2  -3.72642   AATGAATGAGGCAAA              TTGATG GATG CATCAA               GCACAAACGCGACAC  61 373
LPH39_RS03290  782616 ..  782639 -    -3  -3.72576   TGCGTCTGGACGAAA          TCGCCGCGCT GGCT AACGCGGGCA           CGCTGGCCGCGTTCA  53 524
LPH39_RS03270  778910 ..  778923 -  -5.3  -3.48395   AGGGGTGTCAGACAA               GTTCA TTGA TGAAC                TCCAGTCGAAAGCAG  56 49
LPH39_RS03265  777530 ..  777548 -  -8.2  -3.55487   TGACAGCAAGCAGAA             CATCATGC ATC ACATGATG             CCGGGCTCACTCAAC  69 91
LPH39_RS03260  775603 ..  775613 -  -6.8  -3.84887   ATAAAAGTCATTAAA                 TCGG AAA CCGA                 GCACCTTCAAGCCAA  66 276
        recC NONE
LPH39_RS03220 NONE
        recD  761344 ..  761358 -  -4.2  -3.68908   AAACATCCACGCAAA               GATCGA TGC TCGCTC               ATGCCCCACACCTGA  55 352
LPH39_RS03210  759465 ..  759475 -  -4.6  -3.99327   CACCCATCAAAAACA                 CCGC ACC GCAG                 GCACCTTTTCCACTT  62 201
LPH39_RS03205  758985 ..  758997 -  -6.9  -3.57561   CGTGAACTTCTGAAA                GCGCG CGC CACGC                TGCGGTGAAACACCC  61 142
        tsaD  753739 ..  753749 -  -5.4   -5.3104   TTAGGAAAAATAAAA                 CACT CAG AGTG                 CAGAAAACGGTTTCA  85 62
        folB  753323 ..  753345 -  -4.8  -3.16683   ACTGGATTGCAGCAA           CGTCAGCATC CAA GATGCTCACC           ACACTTAAGCGGCCT  50 30
LPH39_RS03170  751551 ..  751565 -  -2.1  -4.46976   ACTAACAAAGATAAA               CAGAT CAAAC ACCTG               TATGTCTCGCTGCAC  61 281
LPH39_RS03165  749012 ..  749028 -  -2.2  -3.01329   CCATACAGTAAATCA              GGCCCT CCCCT AGAACC              TAGGCATCAATCCAA  42 83
LPH39_RS03160  748438 ..  748463 -  -6.2  -3.13728   AGCATTGACATCGAA         TCGCTCATCA TTCCCG TGATGAGCCA          ATACCACTCCACACT  55 190
LPH39_RS03155  747440 ..  747450 -  -3.2  -4.56607   GTACTAAGGACAAAA                 CGTG CGG CACA                 CTTCAACCTGTGTTA  66 285
LPH39_RS03135  744206 ..  744219 -  -6.7  -4.22346   CAAACGCATCGAAAA               GCTTC CCAA GAAGC                AGAAATCCCATATTC  71 98
LPH39_RS03130  742278 ..  742290 -  -4.1  -3.14463   AAGCGCGTTTAGTAA                CAACA CTG TGCTG                TTTCTGAGCAGCTTT  48 240
LPH39_RS03120  740360 ..  740370 -  -8.2  -4.57882   TGCAAGAACAACAAA                 CCGC CAA GCGG                 CATCACAACATCACT  83 36
        hflK NONE
LPH39_RS03100 NONE
LPH39_RS03095  734958 ..  734994 - -13.7  -4.33105   GAAGCATCATCAAAA    CACCTCAGACACCGCGA TGA TCGCGATGTCTGGGAAG    TAACATTAGCCATAC 100 115
LPH39_RS03090  733204 ..  733219 -    -9  -4.19953   TATTTAATCTCAAAA              GCTGCA CTGC TGCAGC               TTGACGAAGAACAGC  80 374
         ndk NONE
        rlmN NONE
        pilW  725987 ..  726008 -  -5.1  -2.51872   CTGATCACAATACAT           TAGCCCCTGG GTT CC-GCGGCTA           CATTTTCGGGAAACT  48 3
LPH39_RS03065  725050 ..  725066 - -10.1   -3.5944   ATCGATATCCTCAAA              CCCACCG TTC CAGTGGG              ACCTATTTAATTTAA  77 72
LPH39_RS03060  724404 ..  724419 -  -3.2  -2.78798   ATCTCTCATTTAAAT              CGGATCC ACA GG-CCCG              GGCACCAGGCCTCCC  43 4
        bamB NONE
         der NONE
LPH39_RS03035  714618 ..  714650 -  -5.6  -3.78934   CTGTTCCTAGAAGAA     CGTTGCACGCCGT TTTACCTC ACGGCGTGC-ATG      ACAACCAGGTTCACA  59 192
        ppnN  711842 ..  711856 -  -5.6  -3.54919   AACTATCGCTGTAAA               GCAGAC ACT GTCAGC               ACATTACAGAGCAAA  56 112
LPH39_RS03025  711238 ..  711291 -  -2.9  -3.95584   CTTCGATCAACGAAA CTCCAAGCGGACGCACAGACCACTG CCAA CAACGGTTTGAGCGCCCTCTCATTG GCACACACCCTTGTC  54 20
        pilV NONE
LPH39_RS03015 NONE
LPH39_RS03010 NONE
LPH39_RS03005 NONE
LPH39_RS03000  704028 ..  704053 -  -8.4  -2.81281   TCAGCTAAAAGCAAT         TCCTGAGTGCT TTACC AGCACTC-GGA         TAATTGGCCTTGACT  62 11
LPH39_RS02995  703814 ..  703841 - -11.4  -4.41633   CACGCGGAAAAACAA        CAAGGGCCTTCA TCTC TGAAAACCCTTG         CATTTAAAGCAATTC  93 42
LPH39_RS02990 NONE
LPH39_RS02985 NONE
LPH39_RS11975  702758 ..  702770 -  -4.7  -2.93382   CGTTACAGGTACAGA                CGGCC TAG GGCCT                GCCCAACCCACATCC  49 151
LPH39_RS02980  701409 ..  701425 -  -5.2  -3.36648   TAAGACAGGCTAGAA              GTTATC GCTGA GATAAC              GGCTAATAAAAATAG  54 3
LPH39_RS02975  700890 ..  700907 -  -8.4  -2.73441   CATCATGTGGCAAAT             CGCTGG CAACGT CCAGCG              GGGTGAGGCAGTAAG  61 61
LPH39_RS02970  700004 ..  700028 - -11.6     -3.24   AAATTAAGCCAGCAA          TATAGCCTCA CGTTC TGAGGCTATA          GACATCACTGCCGAC  79 483
LPH39_RS02965  698458 ..  698484 - -16.6  -3.58037   GATTAATCTTCCAAA         GCGTAAGGGGCC AAA GGCCCCCTACAC         CCTCACTCAGAATAC 100 40
LPH39_RS02955  697517 ..  697534 -  -9.1  -5.37865   CCAAGAATGAAAAAA             CCCCGCA TCGC TGCGAGG              CCTGCTTTTAAGCTG 100 382
LPH39_RS02950  697004 ..  697034 -  -8.8  -2.85351   CTTCCGTACAGTACA       CGCCGCTACGGCAC ATG GATCCGCAGCGGTG       GCTAAGAGAGTTTGG  62 27
LPH39_RS02945  695903 ..  695916 -  -3.1  -4.07568   GCCCCGGTTCGAAAA               CG-CCT CCA AGGACG               CCATGAGTGGTATGT  56 490
LPH39_RS02930  692527 ..  692540 -  -3.8  -3.79849   CAAGCACAGCAACAA               CTGC AGAAGA GCAG                GAAACAGCCATCCCC  55 439
LPH39_RS02910 NONE
LPH39_RS02905  683267 ..  683294 -  -9.8  -3.09878   GGTAGCCATTCAACA        CCGCCCCAGCATG GCA CTTAC-GGGGCGG        CTGTGGAAAATGCGA  70 173
        rsgA  681983 ..  681999 -  -2.3  -4.82678   CTACAAAAATTAAAA              CAATTCA ACC TGAATTC              GAAGGAACGTCAGGG  67 53
LPH39_RS02890  678526 ..  678536 -  -3.2  -3.90586   ATACCATGCCATAAA                 GATG CAG CACC                 CTGGAGCAATTATCA  55 234
LPH39_RS02885  677391 ..  677411 -  -2.5  -3.51232   GTTGGGTCAAACCAA            CGCAACT GCGTGAA AGCCGCG            GTTATGCGATCGTTG  46 238
        hemH  674015 ..  674028 -  -5.3  -4.19735   GTGCTGAAAAGTAAA               CATTG CCTA CAATG                CACTGCACCAAACTC  66 66
         tmk  663927 ..  663945 -  -4.6   -2.6927   ACCCGGCAGACACCA             CATGGT GCCAGCA ACCATG             CAAGCAAGCAGATGT  46 416
LPH39_RS02805 NONE
LPH39_RS02800 NONE
         hda  657094 ..  657108 -  -4.2  -2.58544   GGCTACGGTCACAAG               CCGCCT CCT AGACAG               ATTACAAAATGTTCG  44 121
LPH39_RS02775  653086 ..  653100 -  -4.2  -2.52464   TGCCTCCTCAAGGCA               TCTTGC CTA GCAAGG               TAACGGCCACACATC  44 73
LPH39_RS02735 NONE
LPH39_RS02730  642858 ..  642877 -  -3.5  -3.19602   GTGGGCAGAGTAATA            GTGCAGT AACGGG ACAGCAC             TGACCGGTGTATTCA  46 81
LPH39_RS02725  642329 ..  642345 -  -2.2  -3.96705   GCGAGAAAAGCCAAA              GGAGAA AGCAA TTCACC              GCTCGCTGCAAGATG  55 66
LPH39_RS02720 NONE
LPH39_RS02715 NONE
LPH39_RS02710 NONE
         gmd  635537 ..  635550 -  -3.1  -3.84406   CGCTTACCAGAAGAA               CTCAT TAGA ACGAG                AAATCACGTTCGCTG  54 16
LPH39_RS02700  634575 ..  634586 -  -2.2  -3.52192   TGCAACTTGACAGAA                CCCA AGTC TGGA                 TTTCGCAAGACACAA  47 66
LPH39_RS02695 NONE
LPH39_RS02690 NONE
LPH39_RS02685 NONE
LPH39_RS02680 NONE
LPH39_RS02675  629313 ..  629329 -  -7.3  -5.13473   ACTACACTGAAAAAA              TTGACCG TTT CAGTCAA              ACAAATTAGAGTGCA  88 187
LPH39_RS02660  625302 ..  625312 -  -3.2  -3.05536   AAATCATTGCCAACA                 CACA GAG TGCG                 GCTAAACGATGTAAG  45 45
LPH39_RS02655  622895 ..  622911 -  -2.9  -3.97636   AGCCGAACTCATAAA              CAATGCG ATT CGGACTG              CCCATCAATTCCAGG  56 155
LPH39_RS02650  622429 ..  622442 -  -2.4  -2.59569   GCTTGAAATCAACAG               TGGT GTAGAA ACCA                GTCTAGTCTTCTAAA  39 28
LPH39_RS02645  621661 ..  621671 -  -3.2  -3.91281   CGATACAAAAAGTAA                 GCCT CCC AGAC                 AAGGAGAAAGCAGAC  55 251
LPH39_RS02640  620123 ..  620154 -    -3  -4.69214   TACCGAATAAACAAA      CAGGGATTGATACT CAAG AGTACCAACACCCA       TGAGCATTGACTGCT  68 351
        aroE  616313 ..  616323 -  -3.2  -3.24456   AGAGATCATCAGCAA                 CACT AAA AGCG                 CGCCTATTCTTCAGT  46 36
LPH39_RS02625  615018 ..  615033 -  -3.9  -3.53012   GCTGCCGGTGCCAAA              GGGCG CGTTGC CACCC               AAGAAGGCAGTTGAT  52 133
LPH39_RS02620 NONE
LPH39_RS11970  614194 ..  614219 -  -6.9  -4.65895   TTGGTCAGTCAAAAA         CAAACCC-GCCA CGG TGGATGGGTTTG         CGGTCGGTGTTGCTT  77 71
LPH39_RS02595  609553 ..  609568 -  -3.2  -2.90392   GATTGCCGAACTATA              CCGG GTCATGCT CCGG               GAATATCCGGGGGCT  43 168
LPH39_RS02590 NONE
         nth  608050 ..  608063 -  -6.7  -3.21416   CATGCCTATGAGGAA               GCATG GAGT CATGC                AATCTGACGCCAATG  57 431
LPH39_RS02580  607341 ..  607356 - -10.4   -2.7898   CGCAACACGGAAGCA              GCCTCG GCTG CGAGGC               AATCGCTGCAAGTAC  71 411
LPH39_RS02565  604276 ..  604290 -  -5.6  -3.63305   GATACAACTTTCAAA               CAGCGC TTG GCACCG               ATGGTTAGATGGTTA  59 243
LPH39_RS02550  601596 ..  601610 -  -7.8  -2.70525   CTGTTCGAAAGTAAG               GGAGCA TAA TGCCCC               GGTCCAGGCTGTATA  58 94
LPH39_RS02545  600719 ..  600735 -  -2.2  -5.04597   ACTTATAGAGAAAAA              GTGCAT TCAAG ATGCTC              ACTCTCCCTCAATCG  73 67
        tilS  595686 ..  595698 -  -3.4  -2.71712   CGGGGCTGGTCAAAT                CAAC GTGTT GTTG                TTGGATTCCCAACGC  42 7
LPH39_RS02525 NONE
LPH39_RS02520  594501 ..  594524 -  -3.8  -3.41708   TTAACGAAAATCCAA          GACCACGCCTC AGT GAG-CGCGTTC          TACAGCCACGCGCGC  50 11
LPH39_RS02515 NONE
LPH39_RS02510  593378 ..  593388 -    -4  -2.72344   CCGTATTCCGAATTA                 GTAT GGA ATAC                 TGTTTGTTGTATTCT  44 152
LPH39_RS02505 NONE
LPH39_RS02500  592481 ..  592494 -  -3.7  -4.08767   GTCATCGTGGTAAAA               GCGGC TGAG GCCTC                ATGGCAGGTGGTTGG  58 24
LPH39_RS02495  591586 ..  591599 -  -3.9  -2.81547   TGCGGACATCAATTA               TTCAA TTAA TTGAA                TGTGGGCTGCTTGCT  45 204
LPH39_RS02490 NONE
LPH39_RS02485  590683 ..  590694 -  -4.4  -3.72893   TAGTCCCTCATCAAA                GCAA TGAT TTGC                 TGTAGCTGCACGATG  55 127
LPH39_RS02480 NONE
LPH39_RS02475  589474 ..  589493 -  -2.8  -3.42996   TATTACTCATTACAA            CTCCTTAC GGTA ATATGGAG             ATACAAAAATCATGT  47 0
LPH39_RS02470  589177 ..  589189 -  -4.9    -3.965   CCCCAAAACCAAGAA                CAAAA TAA TTTTG                ACCTCGACGAGTGGC  62 101
LPH39_RS02465  586303 ..  586322 - -16.4  -4.36931   GAAGCCATACCAAAA            GGCCCCGC ATCT GCGGGGCC             TCCCAGTACACAACA 100 46
        prmB NONE
        aroC NONE
LPH39_RS02445  583388 ..  583410 -  -7.6  -2.50994   TGCAATCGGAGCAAT           GCAGCAAACG TCC CGTATGCAGC           CCACACCTCAAGGAC  57 33
LPH39_RS02440  581882 ..  581894 -  -6.2  -3.76169   TGAACACCAATATAA                CCGG TGTAG CCGG                AATTCTGAATCCAAC  61 147
LPH39_RS02435  580072 ..  580084 -  -9.1  -2.53876   CGGGACCTCAACCGA                CAGGC ATC GCCTG                TTTATGCAATTTGGT  63 27
        truA  579278 ..  579295 -  -4.1  -3.92373   GAGGCGATTCATAAA             CTCACCT CGGT AGGCAAG              CACCACTTTGCCGGA  57 1
LPH39_RS02425  578590 ..  578602 -  -3.3  -3.87551   ATGACGAAACGTAAA                TGCGG TAT CCCCA                GCAGGCCACTCAAAA  55 35
        trpB NONE
        trpA  575693 ..  575707 -  -8.5  -4.69324   ACAAGAAACAATAAA               GGGCC CTATT GGCCC               GACAGTGACACTGAT  88 340
LPH39_RS02410  574678 ..  574696 -    -3  -3.93236   GACCAACTCCAGAAA             GGCCGCTG CAC CATCAACC             ATCGGGATCATGAAA  54 205
LPH39_RS02400  571951 ..  571963 -  -7.7  -3.28873   ATGCATCAAAAAGGA                CGATG GCA CATCG                CAATAATCGCAATAC  64 61
LPH39_RS02390  571012 ..  571027 - -10.4  -2.63102   ACTATGGCGACACCA              GCGGCA TACC TGCCGC               AACCACTGATAAAAG  64 445
LPH39_RS02370  563383 ..  563412 -  -7.1  -3.64716   GGACGGCCCAAAACA       CACAGGCAC-GCGA CTT CCGCTACGCCTGCG       GCATCCGTTATGCGT  60 252
        gcvP  558384 ..  558400 -  -7.3  -3.12999   GTAGCGGATATGCAA              TGTGACA AAT TGCCACA              TTAAGCAACGCCATA  60 333
LPH39_RS02330  551029 ..  551041 -  -4.8  -3.78597   ACGCATCAATGGAAA                CGCT TACCG AGCG                TGCACATGCATTCTC  57 140
LPH39_RS02295  544363 ..  544373 -  -2.6  -3.81689   AACATTATTATCAAA                 TAAA GGC TTTA                 CTCACTAGGTATGAG  54 146
LPH39_RS02285  542539 ..  542560 -  -2.4  -3.72009   AGAACACCATGCAAA           TTGAT-AGC ACCCG GCTCATCAA           ACATAGCAAGACGTC  50 22
LPH39_RS02280  539969 ..  539997 -  -9.6  -3.52539   CAAGTCCAACGACAA       CACA-GCGCCTCG AAAT CTAGGCGCATGTG        TCATTTATCCCAAGC  74 170
        murA  524587 ..  524603 -  -2.1  -3.03243   AGCGACTTTGCAAGA              TCATGCG ATA CGCCGGA              TCGAGGCACCCAGCG  42 9
LPH39_RS02195  523816 ..  523858 -  -8.4   -3.9693   GACTTACTCAAATAA CGCGCGGTGTATTGCCCCTT TAC AAAAAGCATCACACCGCAAG CAGCAGCCATGAACC  76 449
LPH39_RS02170  514845 ..  514856 -    -3  -2.87463   AACCTCCCTTACACA                TGAT TGGT ATCA                 GCTACGGGAACGTGA  42 23
LPH39_RS02165  514601 ..  514625 -  -6.4  -2.60075   CCCTTCTCAATCAAT          CACAGCCGAA CCATT TTCGGATGCG          TTCTACACAACATGC  53 108
LPH39_RS11965  511369 ..  511406 -  -5.6    -3.551   CCCTAACCTACAGAA   TTCAGCACATGTTCAT CTTTAT ATGGGCATGGGCTGAA    TTGCAACATCATCAG  56 337
LPH39_RS02150  510554 ..  510564 -  -3.2  -3.53012   GCGGGTCTGGCCAAA                 GCCA GCT TGAC                 GGTGATCATGATACG  50 58
LPH39_RS02145 NONE
LPH39_RS02140  508824 ..  508840 -  -4.4  -3.63782   GAAGATGACCCGAAA              GCCGAT TTGGC ATCAGC              AAGCTGACGCCCTCG  55 151
        clpS  504751 ..  504765 -  -4.3  -3.14136   GCACCAACCATGCAA               TCCAA GTAGA TTGGA               ATTAGGGATTTATGC  48 35
        clpA NONE
LPH39_RS02085  495736 ..  495761 -    -4  -3.86822   CAAGGGTGCCATAAA         CACCTGATTT AATGGA AACCCAGGTG          AGAATTAAATAACTT  57 54
LPH39_RS02080  493525 ..  493546 -  -8.7  -2.87211   ACGCTCGGCTATACA           GTGCATCAC ATCA GCGACGCAC            GCTTCTTAAGCCAGG  62 201
LPH39_RS02075 NONE
        lolA  491631 ..  491643 -  -3.3  -3.15544   TTGTATCGTGAGCAA                GACGA AGG TCGGC                ACGTACAGGCGAATA  46 156
LPH39_RS02065  490119 ..  490140 -  -4.4  -3.17486   AACAATGCGGAGGAA           GATGATGG CAATTT CCAGCATC            ACATTCTCCAATTGG  48 127
        crcB  489628 ..  489648 -  -3.9  -2.69799   TGATCGCACATATCA            GCATGCACC AAG GCTCCATGC            CACGCCAACGCTCAA  44 44
LPH39_RS02055  488776 ..  488788 -  -6.3  -2.94099   CGTGGTGACCACATA                CCATT CCC AATGG                TCCATTAGGCGGGCC  55 403
LPH39_RS02050  487746 ..  487759 -  -2.3  -4.55287   TCTATCTATACAAAA               CTGTG ACAT CACTG                AATTGAGTGCATCAT  63 215
LPH39_RS02045  485725 ..  485739 -  -6.4  -3.48063   TACCTAAACTCAGAA               GCACGA TGG TCATGC               AGTATTCGCGCCTGT  61 156
LPH39_RS02030  483335 ..  483351 -  -2.1  -4.00868   TGATCCACAAGCAAA              GCCACAG CAT CGGTCGC              GAACGCGGTCTCCAT  55 48
LPH39_RS02025  482580 ..  482608 -  -7.4   -3.1247   ACCCGGGATACTCAA        TCTGTACCACGC ACTGG GCGCGATACAGG        ACGTCCCCCGTACCT  57 390
        gluP  479553 ..  479567 -  -4.2  -3.18118   GCAGTCGACAATATA               GACACA CGC CGCGTC               GCCCGGATCCGCGGT  48 483
LPH39_RS02000 NONE
        nagA  476506 ..  476527 -  -4.5  -3.80625   GTCCGACAATCCAAA           GTGCATCCTC GAA AAGGAT-CAC           AGCACGATAGATCTG  57 269
LPH39_RS01985  475565 ..  475582 -  -4.1  -3.74626   AGCAAACCATCCAAA             GATGGCA GCCA TGACATC              AATCAATACAAAACC  55 28
LPH39_RS01980  475167 ..  475195 -  -6.7  -3.76224   TGTTGATCTATCAAA        CAGCATCGAGTGA GTT TCACTTAAAGCTG        TAAGCTCCTCCACAC  63 113
        accD NONE
        glmM  472783 ..  472795 -  -4.7  -5.18297   CAACAAGAAATAAAA                CGCGG CGG CCTCG                CCTGCTACAACAAAC  83 48
LPH39_RS01925  462671 ..  462683 -  -9.1  -3.38415   TGAAGCACAAATACA                CCAGG ATG CCTGG                TCAACACATTGACCC  69 488
LPH39_RS01920  459532 ..  459544 -  -4.1  -3.31365   CACCACAGTACAATA                GATAC GAA GCATC                GCAAGAGCACCATCC  50 47
LPH39_RS01915 NONE
        dapF NONE
LPH39_RS01905 NONE
        xerC  456391 ..  456408 -  -6.3  -3.28173   ACCACAAGACGAATA             GTGATTG AGAA CAACCAC              GAGTAGGATCTTAGA  59 440
        hslV  453837 ..  453849 -    -2  -3.17146   CTGGCTTAGAAGACA                TAGA TAAAC TCTA                GATTGCGGCCGCAGC  43 80
        hslU  452370 ..  452380 -  -3.2  -3.55084   GCCGAATACCAAACA                 CCAC GGA GTAG                 CAATACACCTGACCG  50 109
        ubiE  449612 ..  449630 -  -9.6  -3.35996   CAGTGGCACTGACAA             GTCTCTAG AAT CCAGAGAC             AGATAATACGTTCCG  73 132
LPH39_RS01870 NONE
LPH39_RS01865  446118 ..  446129 -  -2.2  -5.46629   AATACCCCAAAAAAA                GTGC TAAT ACAC                 CTCCATCACACATAA  79 125
LPH39_RS01850  443351 ..  443361 -  -3.2  -2.74488   TAACTAGTCTAAGCA                 GCAC CTA ATGC                 ATCCAGGTCAATCAA  42 133
LPH39_RS01840  440520 ..  440532 -  -3.4  -4.37658   AACTTCCCCACAAAA                GCTT ATATG AAGC                CTGCTTCAGCCCGGA  63 31
LPH39_RS01820  434286 ..  434302 -  -3.7   -3.2819   ACCGAACATCAGCAA              TGCAG TCACCAC CTGCA              GCGTGCGAAGGTCGT  48 458
LPH39_RS01815  433321 ..  433345 -  -4.9   -4.3898   ACGAGCGCTACAAAA          TCAGCCCGATC GCC GACTGGACCGA          CCGTGACATTTGGCA  68 442
        cysD  427982 ..  427992 -  -8.2  -2.85896   CTGACCAATCAAGCA                 CGCG TTT CGCG                 TTTTCAATCCGAGTG  62 45
        cysN  425759 ..  425777 -  -8.8  -2.75064   CCGTCCAGCCAAGTA             CCAACCCT CTA AGGGATGG             AATCAACTCCCGATC  62 281
         rph NONE
        rdgB  420977 ..  420990 -  -3.8  -3.71751   AGACAATATAGACAA               GCAG GTCCTT CTGC                ACTCCATCACAACGG  55 119
        hemW NONE
LPH39_RS01755 NONE
LPH39_RS01750  416832 ..  416852 -  -8.3  -2.73875   GCCTCGGTAACACCA            TGTCAATGC CCA GCATTGACC            CAGCGGCGTACGTAC  61 7
LPH39_RS01730 NONE
LPH39_RS01725  412018 ..  412037 -  -6.4  -2.64794   GGCAATCTCACACCA            GCGAAGCT GGAT AACCTCGC             CCGTAACCGTTACAG  53 102
LPH39_RS01720  404919 ..  404944 - -18.3  -5.48787   ACAATACAGAAAAAA         CGCGGGCAGCA CAGT CGCTGCCCGCG          CATACACATCACCAG 100 34
        gspE  402863 ..  402877 -  -2.1  -2.71912   TTATAGCGATACAAC               GGCAT GCGTT ATACC               TCAACGTCCACTGGC  39 51
LPH39_RS01710  401518 ..  401532 -  -4.2  -3.87147   AGATAATAAGAAATA               GATGCA GAA CGCACC               CGTATCATGTTAAGA  57 143
        gspG  401020 ..  401036 -  -2.1  -3.30771   CGAGACTGCTGACAA              CGCAATG GAA CAGAGCG              AGACAACATGCCGCT  45 40
LPH39_RS01700  400546 ..  400563 -  -6.3  -2.60763   CTGACACTTCATAAT             GCTGCAGA CGT TC-GCAGC             GGACCGGAACGCACC  53 1
LPH39_RS01695 NONE
LPH39_RS01690 NONE
LPH39_RS01685 NONE
LPH39_RS01680  398326 ..  398340 -  -2.1   -3.1704   AACAAAATCTGAATA              CG-GCA CAAT TGCTCG               GCCACCTTCAGGCCC  43 185
LPH39_RS01675 NONE
LPH39_RS01670 NONE
        gspM NONE
LPH39_RS01660 NONE
        gspD  392838 ..  392853 -  -3.3  -3.75105   GCAATTCATTAATAA              CATCA TGACCG TGATG               CTGCTGATACGAATC  53 258
LPH39_RS01650  384180 ..  384209 - -10.1  -3.73914   ATCACCGAGTAACAA       GCCGAGATTCC TCCTTAAT GAAATCTCGGC        TTTTGTTGCCCTTAC  79 224
        ahpC  383226 ..  383239 -  -3.8  -4.32034   TGAGGAGGATTAAAA               GCGA ACAGCA TCGC                TGCGCTGCACATCGC  65 171
        ahpF  381513 ..  381525 -  -5.5  -3.89215   GTTCATAAAGCCAAA                CCTCG CGG CAAGG                GAGCGAATTTAAGTC  61 108
LPH39_RS01635  380372 ..  380386 -  -2.8  -3.55173   AGCAGAACAGCACAA               GAAGTC AAA AACTCC               AATCAGTGGCTTGTT  49 207
        tsaB  379184 ..  379198 -  -2.8  -3.18681   GCTCAACCTGATGAA               GCGT AATACAG ACGC               CCCCCCCCCCACAAA  45 415
LPH39_RS01625  378445 ..  378470 - -14.7  -3.48766   CTTACAATGGAAAGA         CGCCCACACGG CAAA CCGTACGGGCG          GTTGTTAGATATTCA  93 200
LPH39_RS01620  377044 ..  377072 -  -4.5  -4.90079   AGGTGAAGAATAAAA        GCGGCACCTCA CCTTATT TGAGGTGCCTT        TTGAGGCGACTTAGT  77 52
        coq7  375175 ..  375185 -  -6.8  -3.09208   AAATCATCGAGTCAA                 TGCG AAG CGCA                 TCGGTACCCTCCTAC  55 169
         crp  372994 ..  373021 -  -4.9  -3.65902   TCTATGTCACGTAAA        GC-ATCCCCCTG TAAGG CAAGGGAATAGC        TACGTTCAAACGGCG  57 454
LPH39_RS01590 NONE
LPH39_RS01585  372043 ..  372068 -  -9.7  -4.40605   ATCCAGAAATATAAA         GGAGCCCAGGA TTCA TGCTGGACTCC          TTTGAGGAATTGCAC  85 43
LPH39_RS01575  368258 ..  368281 - -15.4   -4.7373   TCACTCCACCAAAAA          GAAAGCCCTC TGCA GAGGGCTTTC           CTTGAATTGTTTTAA 100 111
LPH39_RS01540  353268 ..  353280 -  -7.7  -3.59262   TTGGACACCTGCAAA                TGCTG CGT CAGCA                AGCGATGGAAATAAC  63 400
LPH39_RS11960  351835 ..  351856 -  -7.9  -3.26722   TTCACATTTACAACA           GCTCCGACC TATG GATCGGCGC            ATCCGTAGGTATAGC  59 277
LPH39_RS01515  348294 ..  348307 -  -5.9   -3.0814   ACGGAGACTCCAATA               GCAGC GATG GCCGC                CGTGGCAATGGTTGA  53 475
LPH39_RS01510  346939 ..  346949 -  -2.4  -2.73275   CATGCATAGAGATGA                 CTCC TTA GGCG                 GGGATTAAGGAAGGA  39 30
LPH39_RS01505  345590 ..  345601 -  -2.2  -3.51924   TCTTCATGCATACAA                CGAA CGAC CTCG                 CCCAATCCCATAGTA  47 2
LPH39_RS01500 NONE
LPH39_RS01495  344491 ..  344505 -  -7.2  -2.50988   TCAGACCACCAAGAC               TGACTT GCC AAGTCA               TAAGACATGACCGAC  56 196
        fucP NONE
LPH39_RS01485 NONE
LPH39_RS01480  339253 ..  339269 -  -2.1  -3.68836   ACACCGATCCAACAA              GTGGAAC CAA GCCCCCC              GTCCTTGCACAGATA  50 137
LPH39_RS01460  332319 ..  332333 -  -2.8  -4.68994   AGGATCAGCTAAAAA               CATGCT GCC AACACG               CCTTCAAAACGATTA  68 218
LPH39_RS01455  331587 ..  331602 -  -6.1  -3.61268   TATGGAATGGTGAAA              CCGGA CTACCT TCCGG               ACTACTACTCACCAT  58 323
LPH39_RS01445 NONE
LPH39_RS01440 NONE
LPH39_RS01435  325704 ..  325718 -  -4.2  -4.13014   TGCATACGGTCAAAA               GCTGGA AAT TCGAGC               CAGTTAAGGCCATGG  61 180
        serC  322949 ..  322965 -  -2.2  -2.78996   TACGGGGACCCAAAT              CAACCG TAGCG CTGTTG              GAAATCATGCATGAA  40 8
        pheA  321674 ..  321711 -    -2  -5.00616   GGTTTCTGCAAAAAA  CGGCGACCACAGCA-CAA ACTG CCGATGCGGTGGTCA-CG   TGTGCAGACATCGAA  70 57
        aroA  320049 ..  320066 -  -9.9   -5.2189   GTAACCAGGAAAAAA             GCATGCA CACC TGCATGC              ACAACTCAATTTCTT 100 264
        serS  317041 ..  317055 -  -4.2  -4.66537   AATAAAGCAAATAAA               GCGGAA AAT TTCTGC               TCAGCAATCGGCACA  71 402
LPH39_RS01400  315251 ..  315279 -  -2.6  -3.55122   CATCATTCAAATGAA       GCGTGTGTT-TTCA GAT CGAACAACACA-GC       AAACAGTCAACCAAT  49 177
LPH39_RS01395  314118 ..  314128 -  -2.4   -4.1899   CCACTTCATTGAAAA                 GCCG TAT CGTC                 TCCATTTTTCTGCCC  57 5
LPH39_RS01390 NONE
LPH39_RS01385  311546 ..  311562 -    -5  -2.75891   AGATCCATCCAACCA              GCCGCC GCACA GGCGCC              CATGCTTTCCATAGC  47 336
LPH39_RS01380 NONE
LPH39_RS01375 NONE
LPH39_RS01370  308925 ..  308936 -  -4.4  -2.65521   CCCACATCAACCAAG                CACA CATC TGTG                 AAATAAATTTACTCT  44 496
LPH39_RS01365  306675 ..  306690 -  -4.6  -3.53444   CCATCGTGCCTGAAA              TCGCTG CACT CTGCGA               TGCACGCCGGATACC  55 120
LPH39_RS01340  300650 ..  300686 -  -5.8  -3.01712   CGCTCTTCTCCAATA   GGCTAGACGTGTGGCCT CTCA AGGCCACACGA-TCGAC    TTCGCATCGAATGGG  53 221
LPH39_RS11955  294279 ..  294291 -  -3.3  -3.61506   TGATCCGCAAAAAAC                CGAGC CAC GCTAG                CGCTTCAGCCCAAGC  50 22
LPH39_RS01320  291973 ..  291987 -  -4.2  -4.43309   CAATGGGAAGCAAAA               GCGACA CGG CGTCAC               CCAAACCCGAAAGCA  65 319
LPH39_RS01315  289300 ..  289345 - -11.9  -3.64599   CTAGCAGACGGTAAA CTCCG-GCCACTGGAGGCAGGC TGT GCCTACCTCCAGTTGCACCAAA CGTCCTTTCCAAACC  85 468
LPH39_RS01300 NONE
LPH39_RS01295  284039 ..  284069 - -12.1  -5.31456   TCAACTTACAAAAAA       TAAAAAAGCTGTC GCAAT GACAGCTTTCTTA       TTAAATCAATCCATT 100 26
LPH39_RS01280 NONE
LPH39_RS01275  276290 ..  276316 - -10.9  -4.49756   CTTCAAATACCAAAA        CGCCGCACCTCGG CAA CCGAGG-GCG-CG        AACGTTCCATAGCCT 100 49
         dxs  272956 ..  272969 -  -8.1  -3.60792   TCTCGAATCGCCAAA               GCCCT GAAC AGGGC                TCCACACGTGTACTC  66 127
LPH39_RS01215  263805 ..  263815 -  -5.4  -2.91383   AGCTCCAGTCACACA                 CTCT GCG AGAG                 CAGATGAAGCCTGAC  49 8
LPH39_RS01210  263493 ..  263508 -  -2.5   -3.6543   CAACTCGGGAAAAGA              CCGAA CTTTAT CTCGG               GCAAACCAATCAGGG  50 88
LPH39_RS11950  257695 ..  257709 -  -6.4  -2.72799   TCTTCAGACAGATGA               TCTCAG CAG CCGAGA               AGCCCGTCACAGCAA  53 32
        pbpC  255071 ..  255081 -  -5.4  -2.82327   CCGCCACATGCAAAC                 GTGA GTA TCAC                 TGAACGCCGACACGC  49 82
LPH39_RS01190  253882 ..  253905 - -11.7  -4.53034   CTCACACAAGGAAAA          GCCCGTAGC ATCGAA GCCACGGGC           CCGCCCGATCCGTTC 100 129
LPH39_RS01185  252692 ..  252704 -  -4.1   -4.3351   AGAAAATGCAATAAA                GAAAC CTC GCTTC                AACGCTTGCCAAGCC  65 300
        katG  250140 ..  250155 -  -3.2  -5.38549   GCGAAACAACAAAAA              TCAGTG CGAA CACTGT               TGCCGTACTCATCAA  81 125
LPH39_RS01175  247790 ..  247801 -    -3  -2.62263   ATGCTGGTTAGATTA                TTGA CGGA TCAA                 GGATCCAGCTCTGTT  41 241
LPH39_RS01170  246944 ..  246967 -  -7.4  -3.01924   TACCGTCGGGGAATA          TGGGCGATGCC TCA GGCAT-GCCCT          GTATAGTCCGTTAAC  59 13
        ruvX  246499 ..  246516 -  -3.3  -3.80855   GGTTCGAAAAATCAA             GGAAGCG ACGT CGCCTGC              GTGGGATCGGCAAAC  55 4
LPH39_RS01160  245510 ..  245522 -  -5.5   -2.8934   TTGCAAACGACGACA                CCGCA TCA TGCAG                TCGCGCTCAGCCCAG  49 32
LPH39_RS01155  245030 ..  245040 -  -5.4  -2.85668   CAGCCGGACAGCAGA                 CGAT GAC ATCG                 ACAGACCTCATGATG  49 114
        thrA NONE
LPH39_RS01145 NONE
        thrC  239894 ..  239917 -  -2.3  -4.82548   CAAAAACAGATAAAA          GCAGGCAGC CATTTT ACCGGCTGC           GGTCCCTGCAGATGA  67 330
        hisS NONE
LPH39_RS01130  238092 ..  238103 -  -7.2  -3.06501   TACATCTTGATTTAA                GCCG GCAA CGGC                 GCTTGACCGCATCTC  59 135
LPH39_RS01125 NONE
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA  231446 ..  231461 -  -4.6  -2.78384   TGTGCCGCCACCACA              CGGCCA GAGA CGGCCA               TGCGGACATACCACA  47 63
        hisF NONE
       hisIE  229680 ..  229705 -  -7.6   -3.0976   CTCAATACCTCAATA         CCACGGTATG CCAAGC CACACCGTAG          CCCAATGCAATGCTG  62 323
LPH39_RS01070  226760 ..  226786 - -11.6  -3.72576   CGTTCGGCCATGAAA         CGCGCCGCCTTA ACC TAAGGCAACGCA         AGTTGCGACTTCACT  85 68
LPH39_RS01065  226127 ..  226152 -  -8.9  -3.25942   ATCCCCGCACATCAA         TCCGCAACCAC CGTC GTGGGAGCGGA          TCTGCACTTGCATTA  67 92
LPH39_RS01030  217578 ..  217592 -  -4.2  -3.73775   GGCACGGCCACCAAA               CGCC CCAAACC GGCG               AAGCTCATGACGGGC  57 273
LPH39_RS00990 NONE
LPH39_RS00985 NONE
LPH39_RS00980  200280 ..  200322 -  -3.3  -2.94962   ATATTAGCAATCATA CCCGCACCGGCACC-C-CCCC TTG GGGACGCGGCACCCGTGCAGC AACACCACTCACCTC  45 69
LPH39_RS00975 NONE
LPH39_RS00970 NONE
LPH39_RS00965 NONE
LPH39_RS00960  196182 ..  196203 -  -8.1  -3.08679   TGCTTCGATTCAACA           GCGATGCTTG CAG CAA-CATCGC           ATGCAAGCACCTAAA  60 102
LPH39_RS00955 NONE
LPH39_RS00950 NONE
LPH39_RS00945 NONE
LPH39_RS00940 NONE
LPH39_RS00935  193361 ..  193390 -  -8.5  -2.75382   GAGCTTATTTAACTA       GCCGCTGGCGGCA CCAT TATCACCAGCAGC        CTTGATGCTCATCCA  62 34
LPH39_RS00930 NONE
LPH39_RS00925  192512 ..  192533 -  -8.1  -3.08679   TGCTTCGATTCAACA           GCGATGCTTG CAG CAA-CATCGC           ATGCAAGCACCTAAA  60 102
LPH39_RS00920 NONE
LPH39_RS00915  191686 ..  191696 -  -2.4  -2.94962   ATATTAGCAATCATA                 CCCG CAC CGGC                 ACCCCCCCTTTAGGG  42 102
LPH39_RS00910 NONE
LPH39_RS00905  190401 ..  190411 -  -2.4  -3.54741   TATGACGCGCTGAAA                 GCCG ATC CCGC                 CCGAGCTATCACCCC  48 485
LPH39_RS00890 NONE
LPH39_RS00885 NONE
LPH39_RS00880 NONE
LPH39_RS00875 NONE
LPH39_RS00870 NONE
LPH39_RS00865 NONE
LPH39_RS00860 NONE
LPH39_RS00855 NONE
LPH39_RS00850  171524 ..  171552 - -13.9   -2.7556   AAGCTGATTTAACTA        GCCGCTGGTAACA TCA TGTCATCAGCGGC        CTTGATGCTCATCCA  88 34
LPH39_RS00845 NONE
LPH39_RS00840 NONE
LPH39_RS00835 NONE
LPH39_RS00830 NONE
LPH39_RS00825 NONE
LPH39_RS00820 NONE
LPH39_RS00815 NONE
LPH39_RS00810 NONE
LPH39_RS00805 NONE
LPH39_RS00800  165719 ..  165742 -  -2.6  -4.16121   CAAAAACACTATAAA          TTTATTC-AGC AAC GCTTAAATAAA          ACACCAGGATAGACG  59 7
LPH39_RS00795 NONE
LPH39_RS00790 NONE
LPH39_RS00785 NONE
LPH39_RS00780 NONE
LPH39_RS11940  164085 ..  164097 -  -3.3  -4.93288   AACATTTAAATAAAA                CCCCA AGA TGGGT                ATTCACCGTCACACC  73 34
LPH39_RS00775 NONE
LPH39_RS00770  162962 ..  162978 -  -2.2  -4.26188   GCCAGAGACCGAAAA              GCAGCT TGGCG AGCTGT              ACCGCCACATTGCAA  60 336
LPH39_RS00760  162303 ..  162320 -  -4.7  -3.72453   ACCAACAACGCCAAA             CAGCGCC CAGC GGCGACG              CGGCCTTGCTGAGTA  57 294
LPH39_RS00755  161150 ..  161160 -  -6.8  -2.96216   TCGCAGCAGCATACA                 CCGA GCT TCGG                 AGTCAGCCTTGCTGA  55 438
LPH39_RS00740  157585 ..  157607 -  -7.6  -2.75382   CAGGTGATCCAATCA           CTCAGACGGC CAC GCCGCTCGAG           CCATGGATTATGCAT  59 161
        trxA  150165 ..  150178 -  -5.9  -3.37879   ATCAATCTGAATGAA               GCAGC CTGT GCCGC                TTAACCACCAAGCAC  57 98
LPH39_RS00700  148775 ..  148797 -    -4  -3.75153   TCGGTTCAAGGGAAA           CGGCCGGGAT GAG ATCACTGCCA           CTACAGGCCGGGCCG  55 238
LPH39_RS00680  143054 ..  143066 -  -2.7  -4.21936   CTGATAACTCGAAAA                CTCAT GAA ATAAG                CTAAACGTACAATCA  59 197
LPH39_RS00670  140615 ..  140637 -  -8.4  -3.26031   GTTACGTTAAACATA           TCGACTGCTG TTA CAGCAGCAGA           AAACAAGCTCATTAA  64 94
LPH39_RS00665  140011 ..  140040 -  -7.3  -3.67498   TAATTTTTAAGACAA       TTGAAATACTTAG TAAA CCAAGTATTTCCA        TCATTACAGGAGGCG  67 331
         rnr  126103 ..  126145 - -11.5  -3.17797   GTCATATACACCGAA TCCTTCCATCTTCAAGCAA CAGCT TCACCTGAAGATGGAAGCA GTCCCACCCGCTCGG  79 84
        rlmB  124872 ..  124882 -  -3.2  -3.40331   AATTCATTGAAAAAT                 CGCA AAT TGCA                 TCCTTGACCGGGACA  48 214
LPH39_RS00570  122560 ..  122579 -  -2.9  -4.51378   AGGTACAGGAGAAAA            TGACTGCA CAGAT TGCAG-CA            TGCATCCAGGACACA  64 308
LPH39_RS00560  116962 ..  116974 -  -2.6  -3.28041   AATGTCAAGCACCAA                GCGA TCATG CCGC                AGAAGCCGATTGACA  47 492
        ampE  115329 ..  115347 -  -2.4  -4.36262   ACAGTGATATGAAAA             TCGAGC AAGGCCG GCTCAA             TCTCAGTCAGCACTT  61 201
LPH39_RS00550  114552 ..  114563 -  -2.2  -4.06904   TGACGGAATTAGAAA                CCGA CTCC TCGA                 CTATCTGAACGGCCA  55 344
LPH39_RS11935 NONE
LPH39_RS00530  109654 ..  109679 -  -8.9  -3.14344   CAGCTTGCCCATGAA         CGCGCAGTGCC TACC GGCACTGTGCT          GACCGCGTGCACGTT  67 43
LPH39_RS00515  104770 ..  104786 -  -5.1  -2.62613   CTCTATGGGAAACAT              CATTCAC TTG GAGAATG              TTAAGCGTGAGTCAC  48 26
LPH39_RS00505  103402 ..  103416 -    -7  -2.95009   AACATAAATAAATAG               CGCCAG AAT CGGGCG               AGAGGCGGTTATTCT  59 107
LPH39_RS00500  102330 ..  102357 -  -2.6  -3.45324   CAGGGGCATCAAAGA        CTCCCCTCATTT TTCA ACATGAGGGCTG         CTTGGCCCATCCTGG  49 43
LPH39_RS00495 NONE
LPH39_RS00490  100453 ..  100470 - -11.3  -3.12351   TGGGTTGACACTCAA             GCCATGC AGCA GCATGGC              CCACAAACGCATAGC  76 60
LPH39_RS00485 NONE
LPH39_RS00480   99774 ..   99786 - -10.5  -2.92157   CAGCAATGCGACACA                GCGCG GCG CGCGC                ACGGACTGCACATCC  67 99
LPH39_RS00470   99011 ..   99028 -  -6.9  -2.82193   AGCAGAGGTACCAGA             GGCGCAC ACGC ACGCGCC              AACGGAATACTGTCA  54 146
LPH39_RS00465 NONE
LPH39_RS00460   98261 ..   98276 -  -2.6  -3.59516   AGAAACCAATGAGAA              GC-TCTT AAA AAGACGC              CGAGAACAACACGTG  49 42
LPH39_RS00455   95848 ..   95873 -  -9.1  -2.79183   TTCAGTGTCAGGACA         CT-CATGAGCCA TTC TGGCTCACGCAG         AGGTCGTTGTTGTAC  65 262
        glyQ   94804 ..   94815 -  -3.6  -3.68222   CGCCAATGGCAACAA                GCGG CACA CCAC                 ACTTATCAAAACGGA  53 60
        glyS   92590 ..   92604 -  -4.2  -4.01888   ATCCCAGAGGAGAAA               GCTGAC ATT GTCATC               AGCTGGACAAATGCT  60 24
LPH39_RS00425 NONE
LPH39_RS00420   87631 ..   87661 -  -3.2  -3.25137   AATCTAAATATGCAA      GACGGGATAGCCG ATCAAG CGGC-AGCCTGTC       TAAATTCGGGTGTCC  46 9
LPH39_RS00415   85562 ..   85580 -  -4.6  -2.85061   ACAAGCTGAGAAGCA             TTCAAGCT GGC AGTTTGAA             GTTGGCTGCCGAGCG  47 8
LPH39_RS00410 NONE
LPH39_RS00405 NONE
LPH39_RS00400   78061 ..   78079 -  -3.2  -4.30014   CTCACCAACTCAAAA             CGTTAA ATACACA TTAACG             TCCAATCATTAATTG  60 418
LPH39_RS00375   71690 ..   71711 -  -5.8  -3.40403   GTGTGTTCAGCAGAA           CGAGGTGG CATCGT CCATCTCG            TTCTTATTTCTAATT  57 66
LPH39_RS00360 NONE
        msrA   64798 ..   64812 -  -2.7  -3.81027   TTCAATCAATTGAAA               CGCTG GTTGG CTGCG               ATCGACTAACGATCT  54 210
LPH39_RS00345   63129 ..   63157 - -14.7  -4.41348   TCGGTGCTAAAGAAA        GGGACATCGTG AAAATCG CACGATGTCCC        GCTATTGTCCCACAG 100 81
         tkt   60766 ..   60790 -  -5.6  -3.14211   ACTCGGTTTGAGCAA          TGCGCGCG TGTCTGAAG CGCGCGCT          GAAGCATTGGACGAA  50 342
LPH39_RS00315   55175 ..   55191 -  -3.8  -3.99461   AGCAACCCAAAAATA              TCTTTA TAATT TAAAGA              AAAAATACCGCAACA  60 165
LPH39_RS00310   51986 ..   52002 -  -4.3  -3.19157   CAGCAAGTTCAGCAA              CTCTCCG CGC CAGAGCG              GTTTGGCCGTCGCCC  48 515
LPH39_RS00295   49944 ..   49962 -  -3.1  -4.75954   AAAACGGAAAATAAA             GCACG AAAGGACAG CGTGC             CTCTTTCACAAACGT  68 41
        queC NONE
LPH39_RS00280   46064 ..   46085 -  -5.1  -3.24735   GATCGAAATAGCCAA           TGCAGACGC GAGC ACGTTTGCA            AAAGTACGTGAAGAA  52 156
LPH39_RS00275   45486 ..   45501 -  -7.6  -3.21416   CACTCGTATTATCAA              GAGCAT GTCA ATGCTC               AATTAATGCCCTGCA  62 17
LPH39_RS00270   45049 ..   45059 -  -5.4  -2.73085   CAGTGGAAAGAATAT                 TCTG AGA CAGA                 CACATAGCCTCCCGC  48 246
LPH39_RS00265 NONE
LPH39_RS00260 NONE
LPH39_RS00255 NONE
LPH39_RS00250   42872 ..   42897 - -12.6  -2.71924   CATGCCTCCTTAAAT         CGGGGTGCCT GTACAA AGACACCCCG          TCCACATGAAAGAGA  81 54
LPH39_RS00245 NONE
LPH39_RS00240 NONE
LPH39_RS00235   39644 ..   39661 -  -7.7  -3.90588   CACCGTTGAACCAAA             CATAGCC AATG GGCTACG              GACGCTCTCGCAAAT  69 262
LPH39_RS00210   37445 ..   37455 -  -2.4  -3.10796   GCGCATGATCTAATA                 CTCC GCT GGGG                 TTTTAGAGTCCGGCT  43 9
LPH39_RS00205   37176 ..   37186 -  -3.2  -4.01646   CATATAAAAAACTAA                 GCAG CCG CTAC                 GGAAAGAGATTCCTC  58 11
LPH39_RS00200 NONE
LPH39_RS00195   36488 ..   36532 -  -2.5  -2.87581   TCAACGGAAAGATCA CGGGCTCACGTATCCGTGGAC ATT GCCTACGGCACCGTGTGCACA TCTCATTGACAGTGG  40 153
LPH39_RS00190   35767 ..   35807 -  -3.9  -2.52464   TGTGGGGTCAAGCTA  TGATCCCCCCTTACCCCCC AGC AGGAGACAAGGAAGAACCG  CTTGAGTACCCACAG  44 94
LPH39_RS00185   35269 ..   35285 -  -4.3  -3.26545   CGCAGACACCAGCAA              CGTTGCC ACA GGCATCA              CTACGCCACCTTAGA  48 26
LPH39_RS00180 NONE
LPH39_RS00175   34785 ..   34807 -  -9.1  -5.03314   CCCACCTCGAAAAAA           GGGGTGCCC GACCA AGACACCCC           AAACACATCAAAATA 100 50
LPH39_RS00170 NONE
LPH39_RS00165   32903 ..   32914 -  -3.6  -3.08015   GTAATCACGTGAATA                GGCA TACA CGCC                 CCCTGTCAAGAAACC  45 31
LPH39_RS00160   31729 ..   31748 - -10.8  -5.40464   TAGCAGAAAGAAAAA            TGTAGCTC AAAT GAGCTACA             TTGTCCATACGCAGC 100 57
LPH39_RS00155 NONE
LPH39_RS00150   30753 ..   30783 - -13.4  -4.36127   CTGAATAACGTAAAA       GCCATGCTAACG CCCGAAT CGCTAGCATGGC       TGTAGTTATCGAAGA  95 401
        thiC   25527 ..   25564 - -14.3  -2.56571   CATACATGCAAGTGA   CTGACACAGGAACAAAC AAGT GTTCGTTCCAATGTCAG    AGAAAAGGGAGTACT  87 39
LPH39_RS00125   24573 ..   24590 -  -5.5  -3.06796   TCTGATCGGACGCAA             CGGCCAA CCCA TTGCCCG              CTATTCGCCAACCAA  50 99
LPH39_RS00115   21992 ..   22039 - -18.7  -3.36515   TGTGATTTGTAAAGA CGCTG-GTACTCACACCTGCAA AATAA TTGCAGATGTGAGTACTCTGCG AAGCTAAGATAGTTG 100 58
        gpmA   19988 ..   20002 -  -3.4  -4.35116   TAGTTGACATTAAAA               CCCCTG GAT CTGGAG               AAGTGCACCGCAACT  61 365
LPH39_RS00015    1487 ..    1501 -  -2.8  -3.36117   CTAACGACAGAAAAC               GTATTG AAA CACTAC               TGGGAGATGGTAAGA   0 344
