##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2099054v1 #!genome-build-accession NCBI_Assembly:GCF_020990545.1 #!annotation-date 12/16/2022 03:05:07 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP087680.1 1 2820189 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444770 NZ_CP087680.1 RefSeq region 1 2820189 . + . ID=NZ_CP087680.1:1..2820189;Dbxref=taxon:1444770;Is_circular=true;Name=ANONYMOUS;country=Taiwan;gbkey=Src;genome=chromosome;isolation-source=plant tissue;mol_type=genomic DNA;strain=PLS407 NZ_CP087680.1 RefSeq gene 70 246 . + . ID=gene-LPH41_RS00005;Name=LPH41_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00005;old_locus_tag=LPH41_00005 NZ_CP087680.1 GeneMarkS-2+ CDS 70 246 . + 0 ID=cds-WP_230439294.1;Parent=gene-LPH41_RS00005;Dbxref=Genbank:WP_230439294.1;Name=WP_230439294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00005;product=hypothetical protein;protein_id=WP_230439294.1;transl_table=11 NZ_CP087680.1 RefSeq gene 309 713 . - . ID=gene-LPH41_RS00010;Name=LPH41_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00010;old_locus_tag=LPH41_00010 NZ_CP087680.1 Protein Homology CDS 309 713 . - 0 ID=cds-WP_200866210.1;Parent=gene-LPH41_RS00010;Dbxref=Genbank:WP_200866210.1;Name=WP_200866210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851658.1;locus_tag=LPH41_RS00010;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_200866210.1;transl_table=11 NZ_CP087680.1 RefSeq gene 722 994 . - . ID=gene-LPH41_RS00015;Name=LPH41_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00015;old_locus_tag=LPH41_00015 NZ_CP087680.1 Protein Homology CDS 722 994 . - 0 ID=cds-WP_038272460.1;Parent=gene-LPH41_RS00015;Dbxref=Genbank:WP_038272460.1;Name=WP_038272460.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015947.2;locus_tag=LPH41_RS00015;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038272460.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1084 2211 . - . ID=gene-LPH41_RS00020;Name=LPH41_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00020;old_locus_tag=LPH41_00020 NZ_CP087680.1 Protein Homology CDS 1084 2211 . - 0 ID=cds-WP_114867127.1;Parent=gene-LPH41_RS00020;Dbxref=Genbank:WP_114867127.1;Name=WP_114867127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH41_RS00020;product=hypothetical protein;protein_id=WP_114867127.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2224 2568 . - . ID=gene-LPH41_RS00025;Name=LPH41_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00025;old_locus_tag=LPH41_00025 NZ_CP087680.1 Protein Homology CDS 2224 2568 . - 0 ID=cds-WP_038273069.1;Parent=gene-LPH41_RS00025;Dbxref=Genbank:WP_038273069.1;Name=WP_038273069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH41_RS00025;product=DUF2523 family protein;protein_id=WP_038273069.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2571 3956 . - . ID=gene-LPH41_RS00030;Name=LPH41_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00030;old_locus_tag=LPH41_00030 NZ_CP087680.1 Protein Homology CDS 2571 3956 . - 0 ID=cds-WP_230428213.1;Parent=gene-LPH41_RS00030;Dbxref=Genbank:WP_230428213.1;Name=WP_230428213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097844.1;locus_tag=LPH41_RS00030;product=furin-like repeat-containing protein;protein_id=WP_230428213.1;transl_table=11 NZ_CP087680.1 RefSeq gene 4136 4372 . - . ID=gene-LPH41_RS00035;Name=LPH41_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00035;old_locus_tag=LPH41_00035 NZ_CP087680.1 Protein Homology CDS 4136 4372 . - 0 ID=cds-WP_230428212.1;Parent=gene-LPH41_RS00035;Dbxref=Genbank:WP_230428212.1;Name=WP_230428212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382572.1;locus_tag=LPH41_RS00035;product=major capsid protein;protein_id=WP_230428212.1;transl_table=11 NZ_CP087680.1 RefSeq gene 4381 4587 . - . ID=gene-LPH41_RS00040;Name=LPH41_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00040;old_locus_tag=LPH41_00040 NZ_CP087680.1 Protein Homology CDS 4381 4587 . - 0 ID=cds-WP_038273075.1;Parent=gene-LPH41_RS00040;Dbxref=Genbank:WP_038273075.1;Name=WP_038273075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH41_RS00040;product=hypothetical protein;protein_id=WP_038273075.1;transl_table=11 NZ_CP087680.1 RefSeq gene 4590 4904 . - . ID=gene-LPH41_RS00045;Name=LPH41_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00045;old_locus_tag=LPH41_00045 NZ_CP087680.1 Protein Homology CDS 4590 4904 . - 0 ID=cds-WP_230428211.1;Parent=gene-LPH41_RS00045;Dbxref=Genbank:WP_230428211.1;Name=WP_230428211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474436.1;locus_tag=LPH41_RS00045;product=hypothetical protein;protein_id=WP_230428211.1;transl_table=11 NZ_CP087680.1 RefSeq gene 5180 5767 . - . ID=gene-LPH41_RS00050;Name=LPH41_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00050;old_locus_tag=LPH41_00050 NZ_CP087680.1 Protein Homology CDS 5180 5767 . - 0 ID=cds-WP_038273076.1;Parent=gene-LPH41_RS00050;Dbxref=Genbank:WP_038273076.1;Name=WP_038273076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894347.1;locus_tag=LPH41_RS00050;product=hypothetical protein;protein_id=WP_038273076.1;transl_table=11 NZ_CP087680.1 RefSeq gene 5964 6107 . - . ID=gene-LPH41_RS00055;Name=LPH41_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00055;old_locus_tag=LPH41_00055 NZ_CP087680.1 GeneMarkS-2+ CDS 5964 6107 . - 0 ID=cds-WP_160165233.1;Parent=gene-LPH41_RS00055;Dbxref=Genbank:WP_160165233.1;Name=WP_160165233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00055;product=hypothetical protein;protein_id=WP_160165233.1;transl_table=11 NZ_CP087680.1 RefSeq gene 6226 6426 . - . ID=gene-LPH41_RS00060;Name=LPH41_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00060;old_locus_tag=LPH41_00060 NZ_CP087680.1 Protein Homology CDS 6226 6426 . - 0 ID=cds-WP_038273077.1;Parent=gene-LPH41_RS00060;Dbxref=Genbank:WP_038273077.1;Name=WP_038273077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH41_RS00060;product=hypothetical protein;protein_id=WP_038273077.1;transl_table=11 NZ_CP087680.1 RefSeq gene 6475 6738 . - . ID=gene-LPH41_RS00065;Name=LPH41_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00065;old_locus_tag=LPH41_00065 NZ_CP087680.1 GeneMarkS-2+ CDS 6475 6738 . - 0 ID=cds-WP_162814095.1;Parent=gene-LPH41_RS00065;Dbxref=Genbank:WP_162814095.1;Name=WP_162814095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00065;product=hypothetical protein;protein_id=WP_162814095.1;transl_table=11 NZ_CP087680.1 RefSeq gene 6742 6903 . - . ID=gene-LPH41_RS00070;Name=LPH41_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00070;old_locus_tag=LPH41_00070 NZ_CP087680.1 GeneMarkS-2+ CDS 6742 6903 . - 0 ID=cds-WP_230439295.1;Parent=gene-LPH41_RS00070;Dbxref=Genbank:WP_230439295.1;Name=WP_230439295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00070;product=hypothetical protein;protein_id=WP_230439295.1;transl_table=11 NZ_CP087680.1 RefSeq gene 6992 7459 . + . ID=gene-LPH41_RS00075;Name=LPH41_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00075;old_locus_tag=LPH41_00075 NZ_CP087680.1 Protein Homology CDS 6992 7459 . + 0 ID=cds-WP_160165181.1;Parent=gene-LPH41_RS00075;Dbxref=Genbank:WP_160165181.1;Name=WP_160165181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LPH41_RS00075;product=DUF3693 domain-containing protein;protein_id=WP_160165181.1;transl_table=11 NZ_CP087680.1 RefSeq gene 7518 7862 . + . ID=gene-LPH41_RS00080;Name=LPH41_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00080;old_locus_tag=LPH41_00080 NZ_CP087680.1 Protein Homology CDS 7518 7862 . + 0 ID=cds-WP_038271360.1;Parent=gene-LPH41_RS00080;Dbxref=Genbank:WP_038271360.1;Name=WP_038271360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091322.1;locus_tag=LPH41_RS00080;product=DUF3653 domain-containing protein;protein_id=WP_038271360.1;transl_table=11 NZ_CP087680.1 RefSeq gene 7939 8178 . + . ID=gene-LPH41_RS00085;Name=LPH41_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00085;old_locus_tag=LPH41_00085 NZ_CP087680.1 Protein Homology CDS 7939 8178 . + 0 ID=cds-WP_038271358.1;Parent=gene-LPH41_RS00085;Dbxref=Genbank:WP_038271358.1;Name=WP_038271358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084072.1;locus_tag=LPH41_RS00085;product=hypothetical protein;protein_id=WP_038271358.1;transl_table=11 NZ_CP087680.1 RefSeq gene 8224 9237 . - . ID=gene-LPH41_RS00090;Name=LPH41_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00090;old_locus_tag=LPH41_00090 NZ_CP087680.1 Protein Homology CDS 8224 9237 . - 0 ID=cds-WP_038271357.1;Parent=gene-LPH41_RS00090;Dbxref=Genbank:WP_038271357.1;Name=WP_038271357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894341.1;locus_tag=LPH41_RS00090;product=zonular occludens toxin domain-containing protein;protein_id=WP_038271357.1;transl_table=11 NZ_CP087680.1 RefSeq gene 9343 10149 . - . ID=gene-LPH41_RS00095;Name=LPH41_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00095;old_locus_tag=LPH41_00095 NZ_CP087680.1 Protein Homology CDS 9343 10149 . - 0 ID=cds-WP_038271356.1;Parent=gene-LPH41_RS00095;Dbxref=Genbank:WP_038271356.1;Name=WP_038271356.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340561.1;locus_tag=LPH41_RS00095;product=TatD family hydrolase;protein_id=WP_038271356.1;transl_table=11 NZ_CP087680.1 RefSeq gene 10810 11556 . + . ID=gene-LPH41_RS00100;Name=LPH41_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00100;old_locus_tag=LPH41_00100 NZ_CP087680.1 Protein Homology CDS 10810 11556 . + 0 ID=cds-WP_114867125.1;Parent=gene-LPH41_RS00100;Dbxref=Genbank:WP_114867125.1;Name=WP_114867125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894387.1;locus_tag=LPH41_RS00100;product=superoxide dismutase;protein_id=WP_114867125.1;transl_table=11 NZ_CP087680.1 RefSeq gene 12238 13239 . + . ID=gene-LPH41_RS00105;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LPH41_RS00105;old_locus_tag=LPH41_00105 NZ_CP087680.1 Protein Homology CDS 12238 13239 . + 0 ID=cds-WP_201745829.1;Parent=gene-LPH41_RS00105;Dbxref=Genbank:WP_201745829.1;Name=WP_201745829.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572876.1;locus_tag=LPH41_RS00105;product=quinolinate synthase NadA;protein_id=WP_201745829.1;transl_table=11 NZ_CP087680.1 RefSeq gene 13252 14790 . + . ID=gene-LPH41_RS00110;Name=LPH41_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00110;old_locus_tag=LPH41_00110 NZ_CP087680.1 Protein Homology CDS 13252 14790 . + 0 ID=cds-WP_038271354.1;Parent=gene-LPH41_RS00110;Dbxref=Genbank:WP_038271354.1;Name=WP_038271354.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572875.1;locus_tag=LPH41_RS00110;product=L-aspartate oxidase;protein_id=WP_038271354.1;transl_table=11 NZ_CP087680.1 RefSeq gene 14787 15656 . + . ID=gene-LPH41_RS00115;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LPH41_RS00115;old_locus_tag=LPH41_00115 NZ_CP087680.1 Protein Homology CDS 14787 15656 . + 0 ID=cds-WP_038271353.1;Parent=gene-LPH41_RS00115;Dbxref=Genbank:WP_038271353.1;Name=WP_038271353.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572874.1;locus_tag=LPH41_RS00115;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_038271353.1;transl_table=11 NZ_CP087680.1 RefSeq gene 15763 16227 . - . ID=gene-LPH41_RS00120;Name=LPH41_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00120;old_locus_tag=LPH41_00120 NZ_CP087680.1 GeneMarkS-2+ CDS 15763 16227 . - 0 ID=cds-WP_038271352.1;Parent=gene-LPH41_RS00120;Dbxref=Genbank:WP_038271352.1;Name=WP_038271352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00120;product=hypothetical protein;protein_id=WP_038271352.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 16585 17070 . - . ID=gene-LPH41_RS00125;Name=LPH41_RS00125;end_range=17070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS00125;old_locus_tag=LPH41_00125;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 16585 17070 . - 0 ID=cds-LPH41_RS00125;Parent=gene-LPH41_RS00125;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=17070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894314.1;locus_tag=LPH41_RS00125;partial=true;product=nitrogen regulation protein NR(I);pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 17292 18740 . - . ID=gene-LPH41_RS00130;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=LPH41_RS00130;old_locus_tag=LPH41_00130 NZ_CP087680.1 Protein Homology CDS 17292 18740 . - 0 ID=cds-WP_081755446.1;Parent=gene-LPH41_RS00130;Dbxref=Genbank:WP_081755446.1;Name=WP_081755446.1;Ontology_term=GO:0072488,GO:0008519;gbkey=CDS;gene=amt;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237112.1;locus_tag=LPH41_RS00130;product=ammonium transporter;protein_id=WP_081755446.1;transl_table=11 NZ_CP087680.1 RefSeq gene 18760 19098 . - . ID=gene-LPH41_RS00135;Name=LPH41_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00135;old_locus_tag=LPH41_00135 NZ_CP087680.1 Protein Homology CDS 18760 19098 . - 0 ID=cds-WP_038271350.1;Parent=gene-LPH41_RS00135;Dbxref=Genbank:WP_038271350.1;Name=WP_038271350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016654695.1;locus_tag=LPH41_RS00135;product=P-II family nitrogen regulator;protein_id=WP_038271350.1;transl_table=11 NZ_CP087680.1 RefSeq gene 19379 20788 . - . ID=gene-LPH41_RS00140;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LPH41_RS00140;old_locus_tag=LPH41_00140 NZ_CP087680.1 Protein Homology CDS 19379 20788 . - 0 ID=cds-WP_038271349.1;Parent=gene-LPH41_RS00140;Dbxref=Genbank:WP_038271349.1;Name=WP_038271349.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1;locus_tag=LPH41_RS00140;product=type I glutamate--ammonia ligase;protein_id=WP_038271349.1;transl_table=11 NZ_CP087680.1 RefSeq gene 20983 21768 . + . ID=gene-LPH41_RS00145;Name=LPH41_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00145;old_locus_tag=LPH41_00145 NZ_CP087680.1 Protein Homology CDS 20983 21768 . + 0 ID=cds-WP_038271348.1;Parent=gene-LPH41_RS00145;Dbxref=Genbank:WP_038271348.1;Name=WP_038271348.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341074.1;locus_tag=LPH41_RS00145;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_038271348.1;transl_table=11 NZ_CP087680.1 RefSeq gene 22037 22750 . - . ID=gene-LPH41_RS00150;Name=LPH41_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00150;old_locus_tag=LPH41_00150 NZ_CP087680.1 Protein Homology CDS 22037 22750 . - 0 ID=cds-WP_081755445.1;Parent=gene-LPH41_RS00150;Dbxref=Genbank:WP_081755445.1;Name=WP_081755445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851394.1;locus_tag=LPH41_RS00150;product=YceI family protein;protein_id=WP_081755445.1;transl_table=11 NZ_CP087680.1 RefSeq gene 22813 23403 . - . ID=gene-LPH41_RS00155;Name=LPH41_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00155;old_locus_tag=LPH41_00155 NZ_CP087680.1 Protein Homology CDS 22813 23403 . - 0 ID=cds-WP_038271347.1;Parent=gene-LPH41_RS00155;Dbxref=Genbank:WP_038271347.1;Name=WP_038271347.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159505.1;locus_tag=LPH41_RS00155;product=malonic semialdehyde reductase;protein_id=WP_038271347.1;transl_table=11 NZ_CP087680.1 RefSeq gene 23518 24483 . + . ID=gene-LPH41_RS00160;Name=LPH41_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00160;old_locus_tag=LPH41_00160 NZ_CP087680.1 Protein Homology CDS 23518 24483 . + 0 ID=cds-WP_038271346.1;Parent=gene-LPH41_RS00160;Dbxref=Genbank:WP_038271346.1;Name=WP_038271346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572824.1;locus_tag=LPH41_RS00160;product=ELM1/GtrOC1 family putative glycosyltransferase;protein_id=WP_038271346.1;transl_table=11 NZ_CP087680.1 RefSeq gene 24511 25359 . + . ID=gene-LPH41_RS00165;Name=LPH41_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00165;old_locus_tag=LPH41_00165 NZ_CP087680.1 Protein Homology CDS 24511 25359 . + 0 ID=cds-WP_038271345.1;Parent=gene-LPH41_RS00165;Dbxref=Genbank:WP_038271345.1;Name=WP_038271345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894303.1;locus_tag=LPH41_RS00165;product=DUF2145 domain-containing protein;protein_id=WP_038271345.1;transl_table=11 NZ_CP087680.1 RefSeq gene 25560 25910 . + . ID=gene-LPH41_RS00170;Name=LPH41_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00170;old_locus_tag=LPH41_00170 NZ_CP087680.1 Protein Homology CDS 25560 25910 . + 0 ID=cds-WP_230430835.1;Parent=gene-LPH41_RS00170;Dbxref=Genbank:WP_230430835.1;Name=WP_230430835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607767.1;locus_tag=LPH41_RS00170;product=hypothetical protein;protein_id=WP_230430835.1;transl_table=11 NZ_CP087680.1 RefSeq gene 27028 28233 . + . ID=gene-LPH41_RS00175;Name=LPH41_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00175;old_locus_tag=LPH41_00175 NZ_CP087680.1 Protein Homology CDS 27028 28233 . + 0 ID=cds-WP_038271378.1;Parent=gene-LPH41_RS00175;Dbxref=Genbank:WP_038271378.1;Name=WP_038271378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894301.1;locus_tag=LPH41_RS00175;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_038271378.1;transl_table=11 NZ_CP087680.1 RefSeq gene 28525 28986 . + . ID=gene-LPH41_RS00180;Name=LPH41_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00180;old_locus_tag=LPH41_00180 NZ_CP087680.1 Protein Homology CDS 28525 28986 . + 0 ID=cds-WP_038271343.1;Parent=gene-LPH41_RS00180;Dbxref=Genbank:WP_038271343.1;Name=WP_038271343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894300.1;locus_tag=LPH41_RS00180;product=thioredoxin family protein;protein_id=WP_038271343.1;transl_table=11 NZ_CP087680.1 RefSeq gene 29175 30833 . - . ID=gene-LPH41_RS00185;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LPH41_RS00185;old_locus_tag=LPH41_00185 NZ_CP087680.1 Protein Homology CDS 29175 30833 . - 0 ID=cds-WP_038271342.1;Parent=gene-LPH41_RS00185;Dbxref=Genbank:WP_038271342.1;Name=WP_038271342.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084864.1;locus_tag=LPH41_RS00185;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_038271342.1;transl_table=11 NZ_CP087680.1 RefSeq gene 30830 31477 . - . ID=gene-LPH41_RS00190;Name=LPH41_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00190;old_locus_tag=LPH41_00190 NZ_CP087680.1 Protein Homology CDS 30830 31477 . - 0 ID=cds-WP_038271341.1;Parent=gene-LPH41_RS00190;Dbxref=Genbank:WP_038271341.1;Name=WP_038271341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894298.1;locus_tag=LPH41_RS00190;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_038271341.1;transl_table=11 NZ_CP087680.1 RefSeq gene 32398 33249 . + . ID=gene-LPH41_RS00195;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LPH41_RS00195;old_locus_tag=LPH41_00195 NZ_CP087680.1 Protein Homology CDS 32398 33249 . + 0 ID=cds-WP_038271340.1;Parent=gene-LPH41_RS00195;Dbxref=Genbank:WP_038271340.1;Name=WP_038271340.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237160.1;locus_tag=LPH41_RS00195;product=formyltetrahydrofolate deformylase;protein_id=WP_038271340.1;transl_table=11 NZ_CP087680.1 RefSeq gene 33566 33730 . + . ID=gene-LPH41_RS00200;Name=LPH41_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00200;old_locus_tag=LPH41_00200 NZ_CP087680.1 GeneMarkS-2+ CDS 33566 33730 . + 0 ID=cds-WP_114867124.1;Parent=gene-LPH41_RS00200;Dbxref=Genbank:WP_114867124.1;Name=WP_114867124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00200;product=transposase;protein_id=WP_114867124.1;transl_table=11 NZ_CP087680.1 RefSeq gene 34200 35528 . + . ID=gene-LPH41_RS00205;Name=LPH41_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00205;old_locus_tag=LPH41_00205 NZ_CP087680.1 Protein Homology CDS 34200 35528 . + 0 ID=cds-WP_230439296.1;Parent=gene-LPH41_RS00205;Dbxref=Genbank:WP_230439296.1;Name=WP_230439296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851403.1;locus_tag=LPH41_RS00205;product=GTP-binding protein;protein_id=WP_230439296.1;transl_table=11 NZ_CP087680.1 RefSeq gene 35867 36529 . + . ID=gene-LPH41_RS00210;Name=LPH41_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00210;old_locus_tag=LPH41_00210 NZ_CP087680.1 Protein Homology CDS 35867 36529 . + 0 ID=cds-WP_038271377.1;Parent=gene-LPH41_RS00210;Dbxref=Genbank:WP_038271377.1;Name=WP_038271377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035515.1;locus_tag=LPH41_RS00210;product=alpha/beta hydrolase;protein_id=WP_038271377.1;transl_table=11 NZ_CP087680.1 RefSeq gene 36574 37746 . + . ID=gene-LPH41_RS00215;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LPH41_RS00215;old_locus_tag=LPH41_00215 NZ_CP087680.1 Protein Homology CDS 36574 37746 . + 0 ID=cds-WP_038271338.1;Parent=gene-LPH41_RS00215;Dbxref=Genbank:WP_038271338.1;Name=WP_038271338.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974994.1;locus_tag=LPH41_RS00215;product=cell division protein ZapE;protein_id=WP_038271338.1;transl_table=11 NZ_CP087680.1 RefSeq gene 38248 38679 . + . ID=gene-LPH41_RS00220;Name=LPH41_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00220;old_locus_tag=LPH41_00220 NZ_CP087680.1 Protein Homology CDS 38248 38679 . + 0 ID=cds-WP_038271337.1;Parent=gene-LPH41_RS00220;Dbxref=Genbank:WP_038271337.1;Name=WP_038271337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084870.1;locus_tag=LPH41_RS00220;product=organic hydroperoxide resistance protein;protein_id=WP_038271337.1;transl_table=11 NZ_CP087680.1 RefSeq gene 39066 40055 . + . ID=gene-LPH41_RS00225;Name=LPH41_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00225;old_locus_tag=LPH41_00225 NZ_CP087680.1 Protein Homology CDS 39066 40055 . + 0 ID=cds-WP_038271336.1;Parent=gene-LPH41_RS00225;Dbxref=Genbank:WP_038271336.1;Name=WP_038271336.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084871.1;locus_tag=LPH41_RS00225;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_038271336.1;transl_table=11 NZ_CP087680.1 RefSeq gene 41051 43234 . + . ID=gene-LPH41_RS00230;Name=LPH41_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00230;old_locus_tag=LPH41_00230 NZ_CP087680.1 Protein Homology CDS 41051 43234 . + 0 ID=cds-WP_038271335.1;Parent=gene-LPH41_RS00230;Dbxref=Genbank:WP_038271335.1;Name=WP_038271335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482716.1;locus_tag=LPH41_RS00230;product=carboxy terminal-processing peptidase;protein_id=WP_038271335.1;transl_table=11 NZ_CP087680.1 RefSeq gene 44387 45394 . + . ID=gene-LPH41_RS00235;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LPH41_RS00235;old_locus_tag=LPH41_00235 NZ_CP087680.1 Protein Homology CDS 44387 45394 . + 0 ID=cds-WP_038271334.1;Parent=gene-LPH41_RS00235;Dbxref=Genbank:WP_038271334.1;Name=WP_038271334.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852238.1;locus_tag=LPH41_RS00235;product=ketol-acid reductoisomerase;protein_id=WP_038271334.1;transl_table=11 NZ_CP087680.1 RefSeq gene 45440 47197 . + . ID=gene-LPH41_RS00240;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=LPH41_RS00240;old_locus_tag=LPH41_00240 NZ_CP087680.1 Protein Homology CDS 45440 47197 . + 0 ID=cds-WP_038271333.1;Parent=gene-LPH41_RS00240;Dbxref=Genbank:WP_038271333.1;Name=WP_038271333.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804901.1;locus_tag=LPH41_RS00240;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_038271333.1;transl_table=11 NZ_CP087680.1 RefSeq gene 47181 47426 . + . ID=gene-LPH41_RS00245;Name=LPH41_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00245;old_locus_tag=LPH41_00245 NZ_CP087680.1 Protein Homology CDS 47181 47426 . + 0 ID=cds-WP_038271332.1;Parent=gene-LPH41_RS00245;Dbxref=Genbank:WP_038271332.1;Name=WP_038271332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084875.1;locus_tag=LPH41_RS00245;product=acetolactate synthase;protein_id=WP_038271332.1;transl_table=11 NZ_CP087680.1 RefSeq gene 47544 48596 . + . ID=gene-LPH41_RS00250;Name=LPH41_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00250;old_locus_tag=LPH41_00250 NZ_CP087680.1 Protein Homology CDS 47544 48596 . + 0 ID=cds-WP_038271331.1;Parent=gene-LPH41_RS00250;Dbxref=Genbank:WP_038271331.1;Name=WP_038271331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572807.1;locus_tag=LPH41_RS00250;product=threonine dehydratase;protein_id=WP_038271331.1;transl_table=11 NZ_CP087680.1 RefSeq gene 48651 50210 . + . ID=gene-LPH41_RS00255;Name=LPH41_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00255;old_locus_tag=LPH41_00255 NZ_CP087680.1 Protein Homology CDS 48651 50210 . + 0 ID=cds-WP_230439297.1;Parent=gene-LPH41_RS00255;Dbxref=Genbank:WP_230439297.1;Name=WP_230439297.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156818.1;locus_tag=LPH41_RS00255;product=2-isopropylmalate synthase;protein_id=WP_230439297.1;transl_table=11 NZ_CP087680.1 RefSeq gene 51501 53408 . + . ID=gene-LPH41_RS00260;Name=LPH41_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00260;old_locus_tag=LPH41_00260 NZ_CP087680.1 Protein Homology CDS 51501 53408 . + 0 ID=cds-WP_230439340.1;Parent=gene-LPH41_RS00260;Dbxref=Genbank:WP_230439340.1;Name=WP_230439340.1;Ontology_term=GO:0030245,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084038.1;locus_tag=LPH41_RS00260;product=glycoside hydrolase family 6 protein;protein_id=WP_230439340.1;transl_table=11 NZ_CP087680.1 RefSeq gene 54218 54409 . + . ID=gene-LPH41_RS00265;Name=LPH41_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00265;old_locus_tag=LPH41_00265 NZ_CP087680.1 GeneMarkS-2+ CDS 54218 54409 . + 0 ID=cds-WP_081755444.1;Parent=gene-LPH41_RS00265;Dbxref=Genbank:WP_081755444.1;Name=WP_081755444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00265;product=hypothetical protein;protein_id=WP_081755444.1;transl_table=11 NZ_CP087680.1 RefSeq gene 55467 55700 . + . ID=gene-LPH41_RS00270;Name=LPH41_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00270;old_locus_tag=LPH41_00270 NZ_CP087680.1 Protein Homology CDS 55467 55700 . + 0 ID=cds-WP_038271326.1;Parent=gene-LPH41_RS00270;Dbxref=Genbank:WP_038271326.1;Name=WP_038271326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH41_RS00270;product=hypothetical protein;protein_id=WP_038271326.1;transl_table=11 NZ_CP087680.1 RefSeq gene 55945 56919 . - . ID=gene-LPH41_RS00275;Name=LPH41_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00275;old_locus_tag=LPH41_00275 NZ_CP087680.1 Protein Homology CDS 55945 56919 . - 0 ID=cds-WP_038271325.1;Parent=gene-LPH41_RS00275;Dbxref=Genbank:WP_038271325.1;Name=WP_038271325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502254.1;locus_tag=LPH41_RS00275;product=ketoacyl-ACP synthase III;protein_id=WP_038271325.1;transl_table=11 NZ_CP087680.1 RefSeq gene 57017 57211 . - . ID=gene-LPH41_RS00280;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LPH41_RS00280;old_locus_tag=LPH41_00280 NZ_CP087680.1 Protein Homology CDS 57017 57211 . - 0 ID=cds-WP_038271324.1;Parent=gene-LPH41_RS00280;Dbxref=Genbank:WP_038271324.1;Name=WP_038271324.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302036.1;locus_tag=LPH41_RS00280;product=50S ribosomal protein L32;protein_id=WP_038271324.1;transl_table=11 NZ_CP087680.1 RefSeq gene 57310 57819 . - . ID=gene-LPH41_RS00285;Name=LPH41_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00285;old_locus_tag=LPH41_00285 NZ_CP087680.1 Protein Homology CDS 57310 57819 . - 0 ID=cds-WP_038271323.1;Parent=gene-LPH41_RS00285;Dbxref=Genbank:WP_038271323.1;Name=WP_038271323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814328.1;locus_tag=LPH41_RS00285;product=YceD family protein;protein_id=WP_038271323.1;transl_table=11 NZ_CP087680.1 RefSeq gene 58328 60157 . - . ID=gene-LPH41_RS00290;Name=LPH41_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00290;old_locus_tag=LPH41_00290 NZ_CP087680.1 Protein Homology CDS 58328 60157 . - 0 ID=cds-WP_171898081.1;Parent=gene-LPH41_RS00290;Dbxref=Genbank:WP_171898081.1;Name=WP_171898081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115355.1;locus_tag=LPH41_RS00290;product=glycosyltransferase family 39 protein;protein_id=WP_171898081.1;transl_table=11 NZ_CP087680.1 RefSeq gene 60185 61144 . + . ID=gene-LPH41_RS00295;Name=LPH41_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00295;old_locus_tag=LPH41_00295 NZ_CP087680.1 Protein Homology CDS 60185 61144 . + 0 ID=cds-WP_114867219.1;Parent=gene-LPH41_RS00295;Dbxref=Genbank:WP_114867219.1;Name=WP_114867219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502249.1;locus_tag=LPH41_RS00295;product=MoxR family ATPase;protein_id=WP_114867219.1;transl_table=11 NZ_CP087680.1 RefSeq gene 61147 62106 . + . ID=gene-LPH41_RS00300;Name=LPH41_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00300;old_locus_tag=LPH41_00300 NZ_CP087680.1 Protein Homology CDS 61147 62106 . + 0 ID=cds-WP_038271319.1;Parent=gene-LPH41_RS00300;Dbxref=Genbank:WP_038271319.1;Name=WP_038271319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850007.1;locus_tag=LPH41_RS00300;product=DUF58 domain-containing protein;protein_id=WP_038271319.1;transl_table=11 NZ_CP087680.1 RefSeq gene 62099 64144 . + . ID=gene-LPH41_RS00305;Name=LPH41_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00305;old_locus_tag=LPH41_00305 NZ_CP087680.1 Protein Homology CDS 62099 64144 . + 0 ID=cds-WP_038271318.1;Parent=gene-LPH41_RS00305;Dbxref=Genbank:WP_038271318.1;Name=WP_038271318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572798.1;locus_tag=LPH41_RS00305;product=DUF3488 and transglutaminase-like domain-containing protein;protein_id=WP_038271318.1;transl_table=11 NZ_CP087680.1 RefSeq gene 64038 64559 . + . ID=gene-LPH41_RS00310;Name=LPH41_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00310;old_locus_tag=LPH41_00310 NZ_CP087680.1 Protein Homology CDS 64038 64559 . + 0 ID=cds-WP_038271317.1;Parent=gene-LPH41_RS00310;Dbxref=Genbank:WP_038271317.1;Name=WP_038271317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920486.1;locus_tag=LPH41_RS00310;product=Slp family lipoprotein;protein_id=WP_038271317.1;transl_table=11 NZ_CP087680.1 RefSeq gene 64628 64972 . - . ID=gene-LPH41_RS00315;Name=LPH41_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00315;old_locus_tag=LPH41_00315 NZ_CP087680.1 Protein Homology CDS 64628 64972 . - 0 ID=cds-WP_038271316.1;Parent=gene-LPH41_RS00315;Dbxref=Genbank:WP_038271316.1;Name=WP_038271316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894278.1;locus_tag=LPH41_RS00315;product=histidine triad nucleotide-binding protein;protein_id=WP_038271316.1;transl_table=11 NZ_CP087680.1 RefSeq gene 65049 65645 . - . ID=gene-LPH41_RS00320;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LPH41_RS00320;old_locus_tag=LPH41_00320 NZ_CP087680.1 Protein Homology CDS 65049 65645 . - 0 ID=cds-WP_038271315.1;Parent=gene-LPH41_RS00320;Dbxref=Genbank:WP_038271315.1;Name=WP_038271315.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483843.1;locus_tag=LPH41_RS00320;product=recombination mediator RecR;protein_id=WP_038271315.1;transl_table=11 NZ_CP087680.1 RefSeq gene 65831 66151 . - . ID=gene-LPH41_RS00325;Name=LPH41_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00325;old_locus_tag=LPH41_00325 NZ_CP087680.1 Protein Homology CDS 65831 66151 . - 0 ID=cds-WP_038271372.1;Parent=gene-LPH41_RS00325;Dbxref=Genbank:WP_038271372.1;Name=WP_038271372.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346622.1;locus_tag=LPH41_RS00325;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_038271372.1;transl_table=11 NZ_CP087680.1 RefSeq gene 66158 68050 . - . ID=gene-LPH41_RS00330;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LPH41_RS00330;old_locus_tag=LPH41_00330 NZ_CP087680.1 Protein Homology CDS 66158 68050 . - 0 ID=cds-WP_038271314.1;Parent=gene-LPH41_RS00330;Dbxref=Genbank:WP_038271314.1;Name=WP_038271314.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155800.1;locus_tag=LPH41_RS00330;product=DNA polymerase III subunit gamma/tau;protein_id=WP_038271314.1;transl_table=11 NZ_CP087680.1 RefSeq gene 68197 68289 . + . ID=gene-LPH41_RS00335;Name=LPH41_RS00335;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS00335;old_locus_tag=LPH41_00335 NZ_CP087680.1 tRNAscan-SE tRNA 68197 68289 . + . ID=rna-LPH41_RS00335;Parent=gene-LPH41_RS00335;anticodon=(pos:68231..68233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00335;product=tRNA-Ser NZ_CP087680.1 tRNAscan-SE exon 68197 68289 . + . ID=exon-LPH41_RS00335-1;Parent=rna-LPH41_RS00335;anticodon=(pos:68231..68233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00335;product=tRNA-Ser NZ_CP087680.1 RefSeq gene 68765 68920 . + . ID=gene-LPH41_RS00340;Name=LPH41_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00340;old_locus_tag=LPH41_00340 NZ_CP087680.1 GeneMarkS-2+ CDS 68765 68920 . + 0 ID=cds-WP_160165180.1;Parent=gene-LPH41_RS00340;Dbxref=Genbank:WP_160165180.1;Name=WP_160165180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00340;product=hypothetical protein;protein_id=WP_160165180.1;transl_table=11 NZ_CP087680.1 RefSeq gene 70489 70662 . + . ID=gene-LPH41_RS00345;Name=LPH41_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00345;old_locus_tag=LPH41_00345 NZ_CP087680.1 GeneMarkS-2+ CDS 70489 70662 . + 0 ID=cds-WP_162814093.1;Parent=gene-LPH41_RS00345;Dbxref=Genbank:WP_162814093.1;Name=WP_162814093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00345;product=hypothetical protein;protein_id=WP_162814093.1;transl_table=11 NZ_CP087680.1 RefSeq gene 71011 71247 . - . ID=gene-LPH41_RS00350;Name=LPH41_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00350;old_locus_tag=LPH41_00350 NZ_CP087680.1 GeneMarkS-2+ CDS 71011 71247 . - 0 ID=cds-WP_152536622.1;Parent=gene-LPH41_RS00350;Dbxref=Genbank:WP_152536622.1;Name=WP_152536622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00350;product=hypothetical protein;protein_id=WP_152536622.1;transl_table=11 NZ_CP087680.1 RefSeq gene 71978 72550 . + . ID=gene-LPH41_RS00355;Name=LPH41_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00355;old_locus_tag=LPH41_00355 NZ_CP087680.1 Protein Homology CDS 71978 72550 . + 0 ID=cds-WP_038271312.1;Parent=gene-LPH41_RS00355;Dbxref=Genbank:WP_038271312.1;Name=WP_038271312.1;Ontology_term=GO:0009372;gbkey=CDS;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451122.1;locus_tag=LPH41_RS00355;product=Ax21 family protein;protein_id=WP_038271312.1;transl_table=11 NZ_CP087680.1 RefSeq gene 72701 73750 . - . ID=gene-LPH41_RS00360;Name=LPH41_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00360;old_locus_tag=LPH41_00360 NZ_CP087680.1 Protein Homology CDS 72701 73750 . - 0 ID=cds-WP_038271311.1;Parent=gene-LPH41_RS00360;Dbxref=Genbank:WP_038271311.1;Name=WP_038271311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572788.1;locus_tag=LPH41_RS00360;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_038271311.1;transl_table=11 NZ_CP087680.1 RefSeq gene 73772 74290 . - . ID=gene-LPH41_RS00365;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LPH41_RS00365;old_locus_tag=LPH41_00365 NZ_CP087680.1 Protein Homology CDS 73772 74290 . - 0 ID=cds-WP_038271310.1;Parent=gene-LPH41_RS00365;Dbxref=Genbank:WP_038271310.1;Name=WP_038271310.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894270.1;locus_tag=LPH41_RS00365;product=protein-export chaperone SecB;protein_id=WP_038271310.1;transl_table=11 NZ_CP087680.1 RefSeq gene 74407 74844 . - . ID=gene-LPH41_RS00370;Name=LPH41_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00370;old_locus_tag=LPH41_00370 NZ_CP087680.1 Protein Homology CDS 74407 74844 . - 0 ID=cds-WP_038271309.1;Parent=gene-LPH41_RS00370;Dbxref=Genbank:WP_038271309.1;Name=WP_038271309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084894.1;locus_tag=LPH41_RS00370;product=rhodanese-like domain-containing protein;protein_id=WP_038271309.1;transl_table=11 NZ_CP087680.1 RefSeq gene 74921 75358 . - . ID=gene-LPH41_RS00375;Name=LPH41_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00375;old_locus_tag=LPH41_00375 NZ_CP087680.1 Protein Homology CDS 74921 75358 . - 0 ID=cds-WP_038271308.1;Parent=gene-LPH41_RS00375;Dbxref=Genbank:WP_038271308.1;Name=WP_038271308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089413.1;locus_tag=LPH41_RS00375;product=hypothetical protein;protein_id=WP_038271308.1;transl_table=11 NZ_CP087680.1 RefSeq gene 75502 76275 . + . ID=gene-LPH41_RS00380;Name=LPH41_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00380;old_locus_tag=LPH41_00380 NZ_CP087680.1 Protein Homology CDS 75502 76275 . + 0 ID=cds-WP_038271371.1;Parent=gene-LPH41_RS00380;Dbxref=Genbank:WP_038271371.1;Name=WP_038271371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370608.1;locus_tag=LPH41_RS00380;product=uroporphyrinogen-III synthase;protein_id=WP_038271371.1;transl_table=11 NZ_CP087680.1 RefSeq gene 76323 77303 . + . ID=gene-LPH41_RS00385;Name=LPH41_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00385;old_locus_tag=LPH41_00385 NZ_CP087680.1 Protein Homology CDS 76323 77303 . + 0 ID=cds-WP_038271307.1;Parent=gene-LPH41_RS00385;Dbxref=Genbank:WP_038271307.1;Name=WP_038271307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488502.1;locus_tag=LPH41_RS00385;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_038271307.1;transl_table=11 NZ_CP087680.1 RefSeq gene 77300 78469 . + . ID=gene-LPH41_RS00390;Name=LPH41_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00390;old_locus_tag=LPH41_00390 NZ_CP087680.1 Protein Homology CDS 77300 78469 . + 0 ID=cds-WP_038271306.1;Parent=gene-LPH41_RS00390;Dbxref=Genbank:WP_038271306.1;Name=WP_038271306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089406.1;locus_tag=LPH41_RS00390;product=porphyrin biosynthesis protein;protein_id=WP_038271306.1;transl_table=11 NZ_CP087680.1 RefSeq gene 78750 82013 . - . ID=gene-LPH41_RS00395;Name=LPH41_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00395;old_locus_tag=LPH41_00395 NZ_CP087680.1 Protein Homology CDS 78750 82013 . - 0 ID=cds-WP_038271305.1;Parent=gene-LPH41_RS00395;Dbxref=Genbank:WP_038271305.1;Name=WP_038271305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917373.1;locus_tag=LPH41_RS00395;product=efflux RND transporter permease subunit;protein_id=WP_038271305.1;transl_table=11 NZ_CP087680.1 RefSeq gene 82006 83721 . - . ID=gene-LPH41_RS00400;Name=LPH41_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00400;old_locus_tag=LPH41_00400 NZ_CP087680.1 Protein Homology CDS 82006 83721 . - 0 ID=cds-WP_230439298.1;Parent=gene-LPH41_RS00400;Dbxref=Genbank:WP_230439298.1;Name=WP_230439298.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=LPH41_RS00400;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_230439298.1;transl_table=11 NZ_CP087680.1 RefSeq gene 83854 84216 . + . ID=gene-LPH41_RS00405;Name=LPH41_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00405;old_locus_tag=LPH41_00405 NZ_CP087680.1 Protein Homology CDS 83854 84216 . + 0 ID=cds-WP_051482320.1;Parent=gene-LPH41_RS00405;Dbxref=Genbank:WP_051482320.1;Name=WP_051482320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009579511.1;locus_tag=LPH41_RS00405;product=rhodanese-like domain-containing protein;protein_id=WP_051482320.1;transl_table=11 NZ_CP087680.1 RefSeq gene 84246 84551 . + . ID=gene-LPH41_RS00410;Name=LPH41_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00410;old_locus_tag=LPH41_00410 NZ_CP087680.1 Protein Homology CDS 84246 84551 . + 0 ID=cds-WP_051482325.1;Parent=gene-LPH41_RS00410;Dbxref=Genbank:WP_051482325.1;Name=WP_051482325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997832.1;locus_tag=LPH41_RS00410;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_051482325.1;transl_table=11 NZ_CP087680.1 RefSeq gene 86244 86642 . - . ID=gene-LPH41_RS00415;Name=LPH41_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00415;old_locus_tag=LPH41_00415 NZ_CP087680.1 Protein Homology CDS 86244 86642 . - 0 ID=cds-WP_038271302.1;Parent=gene-LPH41_RS00415;Dbxref=Genbank:WP_038271302.1;Name=WP_038271302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=LPH41_RS00415;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_038271302.1;transl_table=11 NZ_CP087680.1 RefSeq gene 86639 86890 . - . ID=gene-LPH41_RS00420;Name=LPH41_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00420;old_locus_tag=LPH41_00420 NZ_CP087680.1 Protein Homology CDS 86639 86890 . - 0 ID=cds-WP_038271367.1;Parent=gene-LPH41_RS00420;Dbxref=Genbank:WP_038271367.1;Name=WP_038271367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1;locus_tag=LPH41_RS00420;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038271367.1;transl_table=11 NZ_CP087680.1 RefSeq gene 87567 87845 . + . ID=gene-LPH41_RS00425;Name=LPH41_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00425;old_locus_tag=LPH41_00425 NZ_CP087680.1 Protein Homology CDS 87567 87845 . + 0 ID=cds-WP_038271300.1;Parent=gene-LPH41_RS00425;Dbxref=Genbank:WP_038271300.1;Name=WP_038271300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011342941.1;locus_tag=LPH41_RS00425;product=hypothetical protein;protein_id=WP_038271300.1;transl_table=11 NZ_CP087680.1 RefSeq gene 87988 88302 . - . ID=gene-LPH41_RS00430;Name=LPH41_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00430;old_locus_tag=LPH41_00430 NZ_CP087680.1 Protein Homology CDS 87988 88302 . - 0 ID=cds-WP_038271299.1;Parent=gene-LPH41_RS00430;Dbxref=Genbank:WP_038271299.1;Name=WP_038271299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167230.1;locus_tag=LPH41_RS00430;product=addiction module antidote protein;protein_id=WP_038271299.1;transl_table=11 NZ_CP087680.1 RefSeq gene 88396 88722 . - . ID=gene-LPH41_RS00435;Name=LPH41_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00435;old_locus_tag=LPH41_00435 NZ_CP087680.1 Protein Homology CDS 88396 88722 . - 0 ID=cds-WP_038271298.1;Parent=gene-LPH41_RS00435;Dbxref=Genbank:WP_038271298.1;Name=WP_038271298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798663.1;locus_tag=LPH41_RS00435;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038271298.1;transl_table=11 NZ_CP087680.1 RefSeq gene 88917 89132 . + . ID=gene-LPH41_RS00440;Name=LPH41_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00440;old_locus_tag=LPH41_00440 NZ_CP087680.1 Protein Homology CDS 88917 89132 . + 0 ID=cds-WP_038271297.1;Parent=gene-LPH41_RS00440;Dbxref=Genbank:WP_038271297.1;Name=WP_038271297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337727.1;locus_tag=LPH41_RS00440;product=hypothetical protein;protein_id=WP_038271297.1;transl_table=11 NZ_CP087680.1 RefSeq gene 89129 90688 . + . ID=gene-LPH41_RS00445;Name=LPH41_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00445;old_locus_tag=LPH41_00445 NZ_CP087680.1 Protein Homology CDS 89129 90688 . + 0 ID=cds-WP_038271296.1;Parent=gene-LPH41_RS00445;Dbxref=Genbank:WP_038271296.1;Name=WP_038271296.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086805.1;locus_tag=LPH41_RS00445;product=phage portal protein;protein_id=WP_038271296.1;transl_table=11 NZ_CP087680.1 RefSeq gene 90685 92940 . + . ID=gene-LPH41_RS00450;Name=LPH41_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00450;old_locus_tag=LPH41_00450 NZ_CP087680.1 Protein Homology CDS 90685 92940 . + 0 ID=cds-WP_081755442.1;Parent=gene-LPH41_RS00450;Dbxref=Genbank:WP_081755442.1;Name=WP_081755442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851147.1;locus_tag=LPH41_RS00450;product=Clp protease ClpP;protein_id=WP_081755442.1;transl_table=11 NZ_CP087680.1 RefSeq gene 93003 93377 . + . ID=gene-LPH41_RS00455;Name=LPH41_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00455;old_locus_tag=LPH41_00455 NZ_CP087680.1 Protein Homology CDS 93003 93377 . + 0 ID=cds-WP_038271295.1;Parent=gene-LPH41_RS00455;Dbxref=Genbank:WP_038271295.1;Name=WP_038271295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893040.1;locus_tag=LPH41_RS00455;product=DUF2190 family protein;protein_id=WP_038271295.1;transl_table=11 NZ_CP087680.1 RefSeq gene 93455 93667 . + . ID=gene-LPH41_RS00460;Name=LPH41_RS00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00460;old_locus_tag=LPH41_00460 NZ_CP087680.1 Protein Homology CDS 93455 93667 . + 0 ID=cds-WP_038271294.1;Parent=gene-LPH41_RS00460;Dbxref=Genbank:WP_038271294.1;Name=WP_038271294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086826.1;locus_tag=LPH41_RS00460;product=hypothetical protein;protein_id=WP_038271294.1;transl_table=11 NZ_CP087680.1 RefSeq gene 93683 94261 . + . ID=gene-LPH41_RS00465;Name=LPH41_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00465;old_locus_tag=LPH41_00465 NZ_CP087680.1 Protein Homology CDS 93683 94261 . + 0 ID=cds-WP_081755441.1;Parent=gene-LPH41_RS00465;Dbxref=Genbank:WP_081755441.1;Name=WP_081755441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086808.1;locus_tag=LPH41_RS00465;product=lysozyme;protein_id=WP_081755441.1;transl_table=11 NZ_CP087680.1 RefSeq gene 94258 94416 . + . ID=gene-LPH41_RS00470;Name=LPH41_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00470;old_locus_tag=LPH41_00470 NZ_CP087680.1 GeneMarkS-2+ CDS 94258 94416 . + 0 ID=cds-WP_160165178.1;Parent=gene-LPH41_RS00470;Dbxref=Genbank:WP_160165178.1;Name=WP_160165178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00470;product=hypothetical protein;protein_id=WP_160165178.1;transl_table=11 NZ_CP087680.1 RefSeq gene 94603 94995 . + . ID=gene-LPH41_RS00475;Name=LPH41_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00475;old_locus_tag=LPH41_00475 NZ_CP087680.1 GeneMarkS-2+ CDS 94603 94995 . + 0 ID=cds-WP_051482319.1;Parent=gene-LPH41_RS00475;Dbxref=Genbank:WP_051482319.1;Name=WP_051482319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00475;product=hypothetical protein;protein_id=WP_051482319.1;transl_table=11 NZ_CP087680.1 RefSeq gene 95008 95880 . - . ID=gene-LPH41_RS00480;Name=LPH41_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00480;old_locus_tag=LPH41_00480 NZ_CP087680.1 Protein Homology CDS 95008 95880 . - 0 ID=cds-WP_051482318.1;Parent=gene-LPH41_RS00480;Dbxref=Genbank:WP_051482318.1;Name=WP_051482318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087203.1;locus_tag=LPH41_RS00480;product=site-specific integrase;protein_id=WP_051482318.1;transl_table=11 NZ_CP087680.1 RefSeq gene 96222 96494 . + . ID=gene-LPH41_RS00485;Name=LPH41_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00485;old_locus_tag=LPH41_00485 NZ_CP087680.1 Protein Homology CDS 96222 96494 . + 0 ID=cds-WP_038271292.1;Parent=gene-LPH41_RS00485;Dbxref=Genbank:WP_038271292.1;Name=WP_038271292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371118.1;locus_tag=LPH41_RS00485;product=CopG family ribbon-helix-helix protein;protein_id=WP_038271292.1;transl_table=11 NZ_CP087680.1 RefSeq gene 96437 96793 . + . ID=gene-LPH41_RS00490;Name=LPH41_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00490;old_locus_tag=LPH41_00490 NZ_CP087680.1 Protein Homology CDS 96437 96793 . + 0 ID=cds-WP_200866198.1;Parent=gene-LPH41_RS00490;Dbxref=Genbank:WP_200866198.1;Name=WP_200866198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051576.1;locus_tag=LPH41_RS00490;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_200866198.1;transl_table=11 NZ_CP087680.1 RefSeq gene 96798 97946 . - . ID=gene-LPH41_RS00495;Name=LPH41_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00495;old_locus_tag=LPH41_00495 NZ_CP087680.1 Protein Homology CDS 96798 97946 . - 0 ID=cds-WP_069636227.1;Parent=gene-LPH41_RS00495;Dbxref=Genbank:WP_069636227.1;Name=WP_069636227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH41_RS00495;product=hypothetical protein;protein_id=WP_069636227.1;transl_table=11 NZ_CP087680.1 RefSeq gene 97946 98287 . - . ID=gene-LPH41_RS00500;Name=LPH41_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00500;old_locus_tag=LPH41_00500 NZ_CP087680.1 Protein Homology CDS 97946 98287 . - 0 ID=cds-WP_038273089.1;Parent=gene-LPH41_RS00500;Dbxref=Genbank:WP_038273089.1;Name=WP_038273089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH41_RS00500;product=DUF2523 family protein;protein_id=WP_038273089.1;transl_table=11 NZ_CP087680.1 RefSeq gene 98291 99358 . - . ID=gene-LPH41_RS00505;Name=LPH41_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00505;old_locus_tag=LPH41_00505 NZ_CP087680.1 Protein Homology CDS 98291 99358 . - 0 ID=cds-WP_152536670.1;Parent=gene-LPH41_RS00505;Dbxref=Genbank:WP_152536670.1;Name=WP_152536670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041109.1;locus_tag=LPH41_RS00505;product=virulence factor TspB C-terminal domain-related protein;protein_id=WP_152536670.1;transl_table=11 NZ_CP087680.1 RefSeq gene 99826 100044 . - . ID=gene-LPH41_RS00510;Name=LPH41_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00510;old_locus_tag=LPH41_00510 NZ_CP087680.1 Protein Homology CDS 99826 100044 . - 0 ID=cds-WP_051482398.1;Parent=gene-LPH41_RS00510;Dbxref=Genbank:WP_051482398.1;Name=WP_051482398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017194.2;locus_tag=LPH41_RS00510;product=major capsid protein;protein_id=WP_051482398.1;transl_table=11 NZ_CP087680.1 RefSeq gene 100053 100262 . - . ID=gene-LPH41_RS00515;Name=LPH41_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00515;old_locus_tag=LPH41_00515 NZ_CP087680.1 Protein Homology CDS 100053 100262 . - 0 ID=cds-WP_230428208.1;Parent=gene-LPH41_RS00515;Dbxref=Genbank:WP_230428208.1;Name=WP_230428208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH41_RS00515;product=hypothetical protein;protein_id=WP_230428208.1;transl_table=11 NZ_CP087680.1 RefSeq gene 100262 100555 . - . ID=gene-LPH41_RS00520;Name=LPH41_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00520;old_locus_tag=LPH41_00520 NZ_CP087680.1 Protein Homology CDS 100262 100555 . - 0 ID=cds-WP_038273093.1;Parent=gene-LPH41_RS00520;Dbxref=Genbank:WP_038273093.1;Name=WP_038273093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097860.1;locus_tag=LPH41_RS00520;product=single-stranded DNA-binding protein;protein_id=WP_038273093.1;transl_table=11 NZ_CP087680.1 RefSeq gene 100601 101749 . - . ID=gene-LPH41_RS00525;Name=LPH41_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00525;old_locus_tag=LPH41_00525 NZ_CP087680.1 Protein Homology CDS 100601 101749 . - 0 ID=cds-WP_038273097.1;Parent=gene-LPH41_RS00525;Dbxref=Genbank:WP_038273097.1;Name=WP_038273097.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853102.1;locus_tag=LPH41_RS00525;product=replication initiation factor domain-containing protein;protein_id=WP_038273097.1;transl_table=11 NZ_CP087680.1 RefSeq gene 102180 102362 . - . ID=gene-LPH41_RS00530;Name=LPH41_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00530;old_locus_tag=LPH41_00530 NZ_CP087680.1 Protein Homology CDS 102180 102362 . - 0 ID=cds-WP_114867114.1;Parent=gene-LPH41_RS00530;Dbxref=Genbank:WP_114867114.1;Name=WP_114867114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH41_RS00530;product=hypothetical protein;protein_id=WP_114867114.1;transl_table=11 NZ_CP087680.1 RefSeq gene 102393 102653 . - . ID=gene-LPH41_RS00535;Name=LPH41_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00535;old_locus_tag=LPH41_00535 NZ_CP087680.1 GeneMarkS-2+ CDS 102393 102653 . - 0 ID=cds-WP_230439299.1;Parent=gene-LPH41_RS00535;Dbxref=Genbank:WP_230439299.1;Name=WP_230439299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00535;product=hypothetical protein;protein_id=WP_230439299.1;transl_table=11 NZ_CP087680.1 RefSeq gene 102798 103238 . + . ID=gene-LPH41_RS00540;Name=LPH41_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00540;old_locus_tag=LPH41_00540 NZ_CP087680.1 Protein Homology CDS 102798 103238 . + 0 ID=cds-WP_069636219.1;Parent=gene-LPH41_RS00540;Dbxref=Genbank:WP_069636219.1;Name=WP_069636219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LPH41_RS00540;product=DUF3693 domain-containing protein;protein_id=WP_069636219.1;transl_table=11 NZ_CP087680.1 RefSeq gene 103356 103622 . + . ID=gene-LPH41_RS00545;Name=LPH41_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00545;old_locus_tag=LPH41_00545 NZ_CP087680.1 Protein Homology CDS 103356 103622 . + 0 ID=cds-WP_038272159.1;Parent=gene-LPH41_RS00545;Dbxref=Genbank:WP_038272159.1;Name=WP_038272159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852902.1;locus_tag=LPH41_RS00545;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038272159.1;transl_table=11 NZ_CP087680.1 RefSeq gene 103619 104014 . + . ID=gene-LPH41_RS00550;Name=LPH41_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00550;old_locus_tag=LPH41_00550 NZ_CP087680.1 Protein Homology CDS 103619 104014 . + 0 ID=cds-WP_038272158.1;Parent=gene-LPH41_RS00550;Dbxref=Genbank:WP_038272158.1;Name=WP_038272158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=LPH41_RS00550;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_038272158.1;transl_table=11 NZ_CP087680.1 RefSeq gene 104366 104785 . - . ID=gene-LPH41_RS00555;Name=LPH41_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00555;old_locus_tag=LPH41_00555 NZ_CP087680.1 Protein Homology CDS 104366 104785 . - 0 ID=cds-WP_038272155.1;Parent=gene-LPH41_RS00555;Dbxref=Genbank:WP_038272155.1;Name=WP_038272155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083636.1;locus_tag=LPH41_RS00555;product=hypothetical protein;protein_id=WP_038272155.1;transl_table=11 NZ_CP087680.1 RefSeq gene 104788 105300 . - . ID=gene-LPH41_RS00560;Name=LPH41_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00560;old_locus_tag=LPH41_00560 NZ_CP087680.1 Protein Homology CDS 104788 105300 . - 0 ID=cds-WP_038272154.1;Parent=gene-LPH41_RS00560;Dbxref=Genbank:WP_038272154.1;Name=WP_038272154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894567.1;locus_tag=LPH41_RS00560;product=hypothetical protein;protein_id=WP_038272154.1;transl_table=11 NZ_CP087680.1 RefSeq gene 105293 106048 . - . ID=gene-LPH41_RS00565;Name=LPH41_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00565;old_locus_tag=LPH41_00565 NZ_CP087680.1 GeneMarkS-2+ CDS 105293 106048 . - 0 ID=cds-WP_038272153.1;Parent=gene-LPH41_RS00565;Dbxref=Genbank:WP_038272153.1;Name=WP_038272153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00565;product=VWA domain-containing protein;protein_id=WP_038272153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 106032 106424 . - . ID=gene-LPH41_RS00570;Name=LPH41_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00570;old_locus_tag=LPH41_00570 NZ_CP087680.1 Protein Homology CDS 106032 106424 . - 0 ID=cds-WP_069636218.1;Parent=gene-LPH41_RS00570;Dbxref=Genbank:WP_069636218.1;Name=WP_069636218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090296.1;locus_tag=LPH41_RS00570;product=hypothetical protein;protein_id=WP_069636218.1;transl_table=11 NZ_CP087680.1 RefSeq gene 106463 106918 . + . ID=gene-LPH41_RS00575;Name=LPH41_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00575;old_locus_tag=LPH41_00575 NZ_CP087680.1 GeneMarkS-2+ CDS 106463 106918 . + 0 ID=cds-WP_160199346.1;Parent=gene-LPH41_RS00575;Dbxref=Genbank:WP_160199346.1;Name=WP_160199346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00575;product=hypothetical protein;protein_id=WP_160199346.1;transl_table=11 NZ_CP087680.1 RefSeq gene 106966 107532 . + . ID=gene-LPH41_RS00580;Name=LPH41_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00580;old_locus_tag=LPH41_00580 NZ_CP087680.1 Protein Homology CDS 106966 107532 . + 0 ID=cds-WP_038272151.1;Parent=gene-LPH41_RS00580;Dbxref=Genbank:WP_038272151.1;Name=WP_038272151.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084910.1;locus_tag=LPH41_RS00580;product=pilin;protein_id=WP_038272151.1;transl_table=11 NZ_CP087680.1 RefSeq gene 107580 107948 . - . ID=gene-LPH41_RS00585;Name=LPH41_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00585;old_locus_tag=LPH41_00585 NZ_CP087680.1 Protein Homology CDS 107580 107948 . - 0 ID=cds-WP_038272150.1;Parent=gene-LPH41_RS00585;Dbxref=Genbank:WP_038272150.1;Name=WP_038272150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085010.1;locus_tag=LPH41_RS00585;product=DUF4054 domain-containing protein;protein_id=WP_038272150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 108264 108563 . - . ID=gene-LPH41_RS00590;Name=LPH41_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00590;old_locus_tag=LPH41_00590 NZ_CP087680.1 Protein Homology CDS 108264 108563 . - 0 ID=cds-WP_171898051.1;Parent=gene-LPH41_RS00590;Dbxref=Genbank:WP_171898051.1;Name=WP_171898051.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009580422.1;locus_tag=LPH41_RS00590;product=putative addiction module antidote protein;protein_id=WP_171898051.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 108560 108857 . - . ID=gene-LPH41_RS00595;Name=LPH41_RS00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS00595;old_locus_tag=LPH41_00595;pseudo=true NZ_CP087680.1 Protein Homology CDS 108560 108857 . - 0 ID=cds-LPH41_RS00595;Parent=gene-LPH41_RS00595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894094.1;locus_tag=LPH41_RS00595;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 108979 109161 . - . ID=gene-LPH41_RS00600;Name=LPH41_RS00600;end_range=109161,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS00600;old_locus_tag=LPH41_00600;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 108979 109161 . - 0 ID=cds-LPH41_RS00600;Parent=gene-LPH41_RS00600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=109161,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852371.1;locus_tag=LPH41_RS00600;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 109228 109333 . - . ID=gene-LPH41_RS00605;Name=LPH41_RS00605;end_range=109333,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS00605;old_locus_tag=LPH41_00605;partial=true;pseudo=true;start_range=.,109228 NZ_CP087680.1 Protein Homology CDS 109228 109333 . - 0 ID=cds-LPH41_RS00605;Parent=gene-LPH41_RS00605;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=109333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097944.1;locus_tag=LPH41_RS00605;partial=true;product=BRO family protein;pseudo=true;start_range=.,109228;transl_table=11 NZ_CP087680.1 RefSeq gene 110118 110735 . - . ID=gene-LPH41_RS00610;Name=LPH41_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00610;old_locus_tag=LPH41_00610 NZ_CP087680.1 Protein Homology CDS 110118 110735 . - 0 ID=cds-WP_038272147.1;Parent=gene-LPH41_RS00610;Dbxref=Genbank:WP_038272147.1;Name=WP_038272147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894838.1;locus_tag=LPH41_RS00610;product=glycoside hydrolase family 25 protein;protein_id=WP_038272147.1;transl_table=11 NZ_CP087680.1 RefSeq gene 110962 111432 . - . ID=gene-LPH41_RS00615;Name=LPH41_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00615;old_locus_tag=LPH41_00615 NZ_CP087680.1 Protein Homology CDS 110962 111432 . - 0 ID=cds-WP_114867113.1;Parent=gene-LPH41_RS00615;Dbxref=Genbank:WP_114867113.1;Name=WP_114867113.1;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016991.2;locus_tag=LPH41_RS00615;product=phage portal protein;protein_id=WP_114867113.1;transl_table=11 NZ_CP087680.1 RefSeq gene 111503 111745 . - . ID=gene-LPH41_RS00620;Name=LPH41_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00620;old_locus_tag=LPH41_00620 NZ_CP087680.1 Protein Homology CDS 111503 111745 . - 0 ID=cds-WP_160165207.1;Parent=gene-LPH41_RS00620;Dbxref=Genbank:WP_160165207.1;Name=WP_160165207.1;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016991.2;locus_tag=LPH41_RS00620;product=phage portal protein;protein_id=WP_160165207.1;transl_table=11 NZ_CP087680.1 RefSeq gene 111872 112171 . - . ID=gene-LPH41_RS00625;Name=LPH41_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00625;old_locus_tag=LPH41_00625 NZ_CP087680.1 GeneMarkS-2+ CDS 111872 112171 . - 0 ID=cds-WP_038272145.1;Parent=gene-LPH41_RS00625;Dbxref=Genbank:WP_038272145.1;Name=WP_038272145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00625;product=hypothetical protein;protein_id=WP_038272145.1;transl_table=11 NZ_CP087680.1 RefSeq gene 113203 113278 . - . ID=gene-LPH41_RS00630;Name=LPH41_RS00630;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS00630;old_locus_tag=LPH41_00630 NZ_CP087680.1 tRNAscan-SE tRNA 113203 113278 . - . ID=rna-LPH41_RS00630;Parent=gene-LPH41_RS00630;anticodon=(pos:complement(113243..113245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00630;product=tRNA-Thr NZ_CP087680.1 tRNAscan-SE exon 113203 113278 . - . ID=exon-LPH41_RS00630-1;Parent=rna-LPH41_RS00630;anticodon=(pos:complement(113243..113245));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00630;product=tRNA-Thr NZ_CP087680.1 RefSeq gene 113436 114062 . - . ID=gene-LPH41_RS00635;Name=LPH41_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00635;old_locus_tag=LPH41_00635 NZ_CP087680.1 Protein Homology CDS 113436 114062 . - 0 ID=cds-WP_038272144.1;Parent=gene-LPH41_RS00635;Dbxref=Genbank:WP_038272144.1;Name=WP_038272144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089397.1;locus_tag=LPH41_RS00635;product=SPOR domain-containing protein;protein_id=WP_038272144.1;transl_table=11 NZ_CP087680.1 RefSeq gene 114073 114798 . - . ID=gene-LPH41_RS00640;Name=LPH41_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00640;old_locus_tag=LPH41_00640 NZ_CP087680.1 Protein Homology CDS 114073 114798 . - 0 ID=cds-WP_038272143.1;Parent=gene-LPH41_RS00640;Dbxref=Genbank:WP_038272143.1;Name=WP_038272143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894264.1;locus_tag=LPH41_RS00640;product=type III pantothenate kinase;protein_id=WP_038272143.1;transl_table=11 NZ_CP087680.1 RefSeq gene 114795 115748 . - . ID=gene-LPH41_RS00645;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LPH41_RS00645;old_locus_tag=LPH41_00645 NZ_CP087680.1 Protein Homology CDS 114795 115748 . - 0 ID=cds-WP_038272140.1;Parent=gene-LPH41_RS00645;Dbxref=Genbank:WP_038272140.1;Name=WP_038272140.1;Ontology_term=GO:0006355,GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257360.1;locus_tag=LPH41_RS00645;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_038272140.1;transl_table=11 NZ_CP087680.1 RefSeq gene 116454 116783 . - . ID=gene-LPH41_RS00650;Name=LPH41_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00650;old_locus_tag=LPH41_00650 NZ_CP087680.1 GeneMarkS-2+ CDS 116454 116783 . - 0 ID=cds-WP_152536648.1;Parent=gene-LPH41_RS00650;Dbxref=Genbank:WP_152536648.1;Name=WP_152536648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00650;product=hypothetical protein;protein_id=WP_152536648.1;transl_table=11 NZ_CP087680.1 RefSeq gene 116929 117004 . - . ID=gene-LPH41_RS00655;Name=LPH41_RS00655;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS00655;old_locus_tag=LPH41_00655 NZ_CP087680.1 tRNAscan-SE tRNA 116929 117004 . - . ID=rna-LPH41_RS00655;Parent=gene-LPH41_RS00655;anticodon=(pos:complement(116969..116971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00655;product=tRNA-Gly NZ_CP087680.1 tRNAscan-SE exon 116929 117004 . - . ID=exon-LPH41_RS00655-1;Parent=rna-LPH41_RS00655;anticodon=(pos:complement(116969..116971));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00655;product=tRNA-Gly NZ_CP087680.1 RefSeq gene 117409 118215 . + . ID=gene-LPH41_RS00660;Name=LPH41_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00660;old_locus_tag=LPH41_00660 NZ_CP087680.1 Protein Homology CDS 117409 118215 . + 0 ID=cds-WP_038272139.1;Parent=gene-LPH41_RS00660;Dbxref=Genbank:WP_038272139.1;Name=WP_038272139.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852741.1;locus_tag=LPH41_RS00660;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_038272139.1;transl_table=11 NZ_CP087680.1 RefSeq gene 118262 120868 . - . ID=gene-LPH41_RS00665;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LPH41_RS00665;old_locus_tag=LPH41_00665 NZ_CP087680.1 Protein Homology CDS 118262 120868 . - 0 ID=cds-WP_162814115.1;Parent=gene-LPH41_RS00665;Dbxref=Genbank:WP_162814115.1;Name=WP_162814115.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031336652.1;locus_tag=LPH41_RS00665;product=DNA mismatch repair protein MutS;protein_id=WP_162814115.1;transl_table=11 NZ_CP087680.1 RefSeq gene 121715 122446 . - . ID=gene-LPH41_RS00670;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LPH41_RS00670;old_locus_tag=LPH41_00670 NZ_CP087680.1 Protein Homology CDS 121715 122446 . - 0 ID=cds-WP_230428283.1;Parent=gene-LPH41_RS00670;Dbxref=Genbank:WP_230428283.1;Name=WP_230428283.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382616.1;locus_tag=LPH41_RS00670;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_230428283.1;transl_table=11 NZ_CP087680.1 RefSeq gene 122522 123424 . + . ID=gene-LPH41_RS00675;Name=LPH41_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00675;old_locus_tag=LPH41_00675 NZ_CP087680.1 Protein Homology CDS 122522 123424 . + 0 ID=cds-WP_051482360.1;Parent=gene-LPH41_RS00675;Dbxref=Genbank:WP_051482360.1;Name=WP_051482360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852738.1;locus_tag=LPH41_RS00675;product=Hsp33 family molecular chaperone HslO;protein_id=WP_051482360.1;transl_table=11 NZ_CP087680.1 RefSeq gene 123570 124397 . + . ID=gene-LPH41_RS00680;Name=LPH41_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00680;old_locus_tag=LPH41_00680 NZ_CP087680.1 Protein Homology CDS 123570 124397 . + 0 ID=cds-WP_038272169.1;Parent=gene-LPH41_RS00680;Dbxref=Genbank:WP_038272169.1;Name=WP_038272169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572079.1;locus_tag=LPH41_RS00680;product=hypothetical protein;protein_id=WP_038272169.1;transl_table=11 NZ_CP087680.1 RefSeq gene 124587 124663 . - . ID=gene-LPH41_RS00685;Name=LPH41_RS00685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS00685;old_locus_tag=LPH41_00685 NZ_CP087680.1 tRNAscan-SE tRNA 124587 124663 . - . ID=rna-LPH41_RS00685;Parent=gene-LPH41_RS00685;anticodon=(pos:complement(124627..124629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00685;product=tRNA-Arg NZ_CP087680.1 tRNAscan-SE exon 124587 124663 . - . ID=exon-LPH41_RS00685-1;Parent=rna-LPH41_RS00685;anticodon=(pos:complement(124627..124629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00685;product=tRNA-Arg NZ_CP087680.1 RefSeq gene 125048 125392 . - . ID=gene-LPH41_RS00690;Name=LPH41_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00690;old_locus_tag=LPH41_00690 NZ_CP087680.1 Protein Homology CDS 125048 125392 . - 0 ID=cds-WP_038272135.1;Parent=gene-LPH41_RS00690;Dbxref=Genbank:WP_038272135.1;Name=WP_038272135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084923.1;locus_tag=LPH41_RS00690;product=RidA family protein;protein_id=WP_038272135.1;transl_table=11 NZ_CP087680.1 RefSeq gene 126015 128603 . + . ID=gene-LPH41_RS00695;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=LPH41_RS00695;old_locus_tag=LPH41_00695 NZ_CP087680.1 Protein Homology CDS 126015 128603 . + 0 ID=cds-WP_038272132.1;Parent=gene-LPH41_RS00695;Dbxref=Genbank:WP_038272132.1;Name=WP_038272132.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084924.1;locus_tag=LPH41_RS00695;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_038272132.1;transl_table=11 NZ_CP087680.1 RefSeq gene 129709 133026 . - . ID=gene-LPH41_RS00700;Name=LPH41_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00700;old_locus_tag=LPH41_00700 NZ_CP087680.1 Protein Homology CDS 129709 133026 . - 0 ID=cds-WP_038272125.1;Parent=gene-LPH41_RS00700;Dbxref=Genbank:WP_038272125.1;Name=WP_038272125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087287.1;locus_tag=LPH41_RS00700;product=ankyrin repeat domain-containing protein;protein_id=WP_038272125.1;transl_table=11 NZ_CP087680.1 RefSeq gene 133019 133168 . - . ID=gene-LPH41_RS00705;Name=LPH41_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00705;old_locus_tag=LPH41_00705 NZ_CP087680.1 GeneMarkS-2+ CDS 133019 133168 . - 0 ID=cds-WP_160165206.1;Parent=gene-LPH41_RS00705;Dbxref=Genbank:WP_160165206.1;Name=WP_160165206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00705;product=hypothetical protein;protein_id=WP_160165206.1;transl_table=11 NZ_CP087680.1 RefSeq gene 133432 134658 . + . ID=gene-LPH41_RS00710;Name=LPH41_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00710;old_locus_tag=LPH41_00710 NZ_CP087680.1 Protein Homology CDS 133432 134658 . + 0 ID=cds-WP_230428207.1;Parent=gene-LPH41_RS00710;Dbxref=Genbank:WP_230428207.1;Name=WP_230428207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337879.1;locus_tag=LPH41_RS00710;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_230428207.1;transl_table=11 NZ_CP087680.1 RefSeq gene 134661 135434 . + . ID=gene-LPH41_RS00715;Name=LPH41_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00715;old_locus_tag=LPH41_00715 NZ_CP087680.1 Protein Homology CDS 134661 135434 . + 0 ID=cds-WP_171898080.1;Parent=gene-LPH41_RS00715;Dbxref=Genbank:WP_171898080.1;Name=WP_171898080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302406.1;locus_tag=LPH41_RS00715;product=beta-ketoacyl synthase chain length factor;protein_id=WP_171898080.1;transl_table=11 NZ_CP087680.1 RefSeq gene 135431 136231 . + . ID=gene-LPH41_RS00720;Name=LPH41_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00720;old_locus_tag=LPH41_00720 NZ_CP087680.1 Protein Homology CDS 135431 136231 . + 0 ID=cds-WP_038272117.1;Parent=gene-LPH41_RS00720;Dbxref=Genbank:WP_038272117.1;Name=WP_038272117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571170.1;locus_tag=LPH41_RS00720;product=glycosyltransferase family 2 protein;protein_id=WP_038272117.1;transl_table=11 NZ_CP087680.1 RefSeq gene 136563 137816 . - . ID=gene-LPH41_RS00725;Name=LPH41_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00725;old_locus_tag=LPH41_00725 NZ_CP087680.1 Protein Homology CDS 136563 137816 . - 0 ID=cds-WP_038272115.1;Parent=gene-LPH41_RS00725;Dbxref=Genbank:WP_038272115.1;Name=WP_038272115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009606734.1;locus_tag=LPH41_RS00725;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=WP_038272115.1;transl_table=11 NZ_CP087680.1 RefSeq gene 137987 138838 . - . ID=gene-LPH41_RS00730;Name=LPH41_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00730;old_locus_tag=LPH41_00730 NZ_CP087680.1 Protein Homology CDS 137987 138838 . - 0 ID=cds-WP_081755470.1;Parent=gene-LPH41_RS00730;Dbxref=Genbank:WP_081755470.1;Name=WP_081755470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356673.1;locus_tag=LPH41_RS00730;product=glycosyltransferase family 2 protein;protein_id=WP_081755470.1;transl_table=11 NZ_CP087680.1 RefSeq gene 140443 141477 . + . ID=gene-LPH41_RS00735;Name=LPH41_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00735;old_locus_tag=LPH41_00735 NZ_CP087680.1 Protein Homology CDS 140443 141477 . + 0 ID=cds-WP_038272165.1;Parent=gene-LPH41_RS00735;Dbxref=Genbank:WP_038272165.1;Name=WP_038272165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003084552.1;locus_tag=LPH41_RS00735;product=type IV pilus twitching motility protein PilT;protein_id=WP_038272165.1;transl_table=11 NZ_CP087680.1 RefSeq gene 141635 142765 . + . ID=gene-LPH41_RS00740;Name=LPH41_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00740;old_locus_tag=LPH41_00740 NZ_CP087680.1 Protein Homology CDS 141635 142765 . + 0 ID=cds-WP_038272110.1;Parent=gene-LPH41_RS00740;Dbxref=Genbank:WP_038272110.1;Name=WP_038272110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851681.1;locus_tag=LPH41_RS00740;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_038272110.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 142996 143894 . - . ID=gene-LPH41_RS00745;Name=LPH41_RS00745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS00745;old_locus_tag=LPH41_00745;pseudo=true NZ_CP087680.1 Protein Homology CDS 142996 143894 . - 0 ID=cds-LPH41_RS00745;Parent=gene-LPH41_RS00745;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451607.1;locus_tag=LPH41_RS00745;product=WYL domain-containing protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 145029 145838 . + . ID=gene-LPH41_RS00750;Name=LPH41_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00750;old_locus_tag=LPH41_00750 NZ_CP087680.1 Protein Homology CDS 145029 145838 . + 0 ID=cds-WP_038272108.1;Parent=gene-LPH41_RS00750;Dbxref=Genbank:WP_038272108.1;Name=WP_038272108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302001.1;locus_tag=LPH41_RS00750;product=DUF481 domain-containing protein;protein_id=WP_038272108.1;transl_table=11 NZ_CP087680.1 RefSeq gene 145876 146793 . - . ID=gene-LPH41_RS00755;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LPH41_RS00755;old_locus_tag=LPH41_00755 NZ_CP087680.1 Protein Homology CDS 145876 146793 . - 0 ID=cds-WP_038272106.1;Parent=gene-LPH41_RS00755;Dbxref=Genbank:WP_038272106.1;Name=WP_038272106.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894123.1;locus_tag=LPH41_RS00755;product=hydroxymethylbilane synthase;protein_id=WP_038272106.1;transl_table=11 NZ_CP087680.1 RefSeq gene 146801 147559 . - . ID=gene-LPH41_RS00760;Name=LPH41_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00760;old_locus_tag=LPH41_00760 NZ_CP087680.1 Protein Homology CDS 146801 147559 . - 0 ID=cds-WP_038272104.1;Parent=gene-LPH41_RS00760;Dbxref=Genbank:WP_038272104.1;Name=WP_038272104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851686.1;locus_tag=LPH41_RS00760;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_038272104.1;transl_table=11 NZ_CP087680.1 RefSeq gene 147575 148573 . - . ID=gene-LPH41_RS00765;Name=LPH41_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00765;old_locus_tag=LPH41_00765 NZ_CP087680.1 Protein Homology CDS 147575 148573 . - 0 ID=cds-WP_051482362.1;Parent=gene-LPH41_RS00765;Dbxref=Genbank:WP_051482362.1;Name=WP_051482362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903807.1;locus_tag=LPH41_RS00765;product=sensor histidine kinase;protein_id=WP_051482362.1;transl_table=11 NZ_CP087680.1 RefSeq gene 148625 149296 . - . ID=gene-LPH41_RS00770;Name=LPH41_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00770;old_locus_tag=LPH41_00770 NZ_CP087680.1 Protein Homology CDS 148625 149296 . - 0 ID=cds-WP_038272161.1;Parent=gene-LPH41_RS00770;Dbxref=Genbank:WP_038272161.1;Name=WP_038272161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894120.1;locus_tag=LPH41_RS00770;product=alpha/beta hydrolase;protein_id=WP_038272161.1;transl_table=11 NZ_CP087680.1 RefSeq gene 149329 151233 . - . ID=gene-LPH41_RS00775;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=LPH41_RS00775;old_locus_tag=LPH41_00775 NZ_CP087680.1 Protein Homology CDS 149329 151233 . - 0 ID=cds-WP_230428205.1;Parent=gene-LPH41_RS00775;Dbxref=Genbank:WP_230428205.1;Name=WP_230428205.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084963.1;locus_tag=LPH41_RS00775;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_230428205.1;transl_table=11 NZ_CP087680.1 RefSeq gene 151805 152554 . - . ID=gene-LPH41_RS00780;Name=LPH41_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00780;old_locus_tag=LPH41_00780 NZ_CP087680.1 Protein Homology CDS 151805 152554 . - 0 ID=cds-WP_038272101.1;Parent=gene-LPH41_RS00780;Dbxref=Genbank:WP_038272101.1;Name=WP_038272101.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088627.1;locus_tag=LPH41_RS00780;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_038272101.1;transl_table=11 NZ_CP087680.1 RefSeq gene 152576 153628 . + . ID=gene-LPH41_RS00785;Name=LPH41_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00785;old_locus_tag=LPH41_00785 NZ_CP087680.1 Protein Homology CDS 152576 153628 . + 0 ID=cds-WP_038272098.1;Parent=gene-LPH41_RS00785;Dbxref=Genbank:WP_038272098.1;Name=WP_038272098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088625.1;locus_tag=LPH41_RS00785;product=glycosyltransferase family 9 protein;protein_id=WP_038272098.1;transl_table=11 NZ_CP087680.1 RefSeq gene 153646 154053 . - . ID=gene-LPH41_RS00790;Name=LPH41_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00790;old_locus_tag=LPH41_00790 NZ_CP087680.1 Protein Homology CDS 153646 154053 . - 0 ID=cds-WP_038272096.1;Parent=gene-LPH41_RS00790;Dbxref=Genbank:WP_038272096.1;Name=WP_038272096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086118.1;locus_tag=LPH41_RS00790;product=DUF6165 family protein;protein_id=WP_038272096.1;transl_table=11 NZ_CP087680.1 RefSeq gene 155786 155876 . - . ID=gene-LPH41_RS00795;Name=LPH41_RS00795;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS00795;old_locus_tag=LPH41_00795 NZ_CP087680.1 tRNAscan-SE tRNA 155786 155876 . - . ID=rna-LPH41_RS00795;Parent=gene-LPH41_RS00795;anticodon=(pos:complement(155840..155842));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00795;product=tRNA-Ser NZ_CP087680.1 tRNAscan-SE exon 155786 155876 . - . ID=exon-LPH41_RS00795-1;Parent=rna-LPH41_RS00795;anticodon=(pos:complement(155840..155842));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS00795;product=tRNA-Ser NZ_CP087680.1 RefSeq gene 155999 156715 . + . ID=gene-LPH41_RS00800;Name=LPH41_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00800;old_locus_tag=LPH41_00800 NZ_CP087680.1 Protein Homology CDS 155999 156715 . + 0 ID=cds-WP_038272160.1;Parent=gene-LPH41_RS00800;Dbxref=Genbank:WP_038272160.1;Name=WP_038272160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483822.1;locus_tag=LPH41_RS00800;product=serine/threonine-protein phosphatase;protein_id=WP_038272160.1;transl_table=11 NZ_CP087680.1 RefSeq gene 156766 157488 . - . ID=gene-LPH41_RS00805;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LPH41_RS00805;old_locus_tag=LPH41_00805 NZ_CP087680.1 Protein Homology CDS 156766 157488 . - 0 ID=cds-WP_038272095.1;Parent=gene-LPH41_RS00805;Dbxref=Genbank:WP_038272095.1;Name=WP_038272095.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894606.1;locus_tag=LPH41_RS00805;product=DNA polymerase III subunit epsilon;protein_id=WP_038272095.1;transl_table=11 NZ_CP087680.1 RefSeq gene 157485 157937 . - . ID=gene-LPH41_RS00810;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LPH41_RS00810;old_locus_tag=LPH41_00810 NZ_CP087680.1 Protein Homology CDS 157485 157937 . - 0 ID=cds-WP_038272094.1;Parent=gene-LPH41_RS00810;Dbxref=Genbank:WP_038272094.1;Name=WP_038272094.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088617.1;locus_tag=LPH41_RS00810;product=ribonuclease HI;protein_id=WP_038272094.1;transl_table=11 NZ_CP087680.1 RefSeq gene 157951 158565 . - . ID=gene-LPH41_RS00815;Name=LPH41_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00815;old_locus_tag=LPH41_00815 NZ_CP087680.1 Protein Homology CDS 157951 158565 . - 0 ID=cds-WP_230428204.1;Parent=gene-LPH41_RS00815;Dbxref=Genbank:WP_230428204.1;Name=WP_230428204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894608.1;locus_tag=LPH41_RS00815;product=class I SAM-dependent methyltransferase;protein_id=WP_230428204.1;transl_table=11 NZ_CP087680.1 RefSeq gene 158610 159374 . + . ID=gene-LPH41_RS00820;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LPH41_RS00820;old_locus_tag=LPH41_00820 NZ_CP087680.1 Protein Homology CDS 158610 159374 . + 0 ID=cds-WP_038272090.1;Parent=gene-LPH41_RS00820;Dbxref=Genbank:WP_038272090.1;Name=WP_038272090.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346589.1;locus_tag=LPH41_RS00820;product=hydroxyacylglutathione hydrolase;protein_id=WP_038272090.1;transl_table=11 NZ_CP087680.1 RefSeq gene 159641 160702 . - . ID=gene-LPH41_RS00825;Name=LPH41_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00825;old_locus_tag=LPH41_00825 NZ_CP087680.1 Protein Homology CDS 159641 160702 . - 0 ID=cds-WP_230439300.1;Parent=gene-LPH41_RS00825;Dbxref=Genbank:WP_230439300.1;Name=WP_230439300.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852652.1;locus_tag=LPH41_RS00825;product=tyrosine-type recombinase/integrase;protein_id=WP_230439300.1;transl_table=11 NZ_CP087680.1 RefSeq gene 160715 160951 . - . ID=gene-LPH41_RS00830;Name=LPH41_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00830;old_locus_tag=LPH41_00830 NZ_CP087680.1 Protein Homology CDS 160715 160951 . - 0 ID=cds-WP_069636229.1;Parent=gene-LPH41_RS00830;Dbxref=Genbank:WP_069636229.1;Name=WP_069636229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852651.1;locus_tag=LPH41_RS00830;product=DUF4224 domain-containing protein;protein_id=WP_069636229.1;transl_table=11 NZ_CP087680.1 RefSeq gene 161002 161535 . - . ID=gene-LPH41_RS00835;Name=LPH41_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00835;old_locus_tag=LPH41_00835 NZ_CP087680.1 Protein Homology CDS 161002 161535 . - 0 ID=cds-WP_230439341.1;Parent=gene-LPH41_RS00835;Dbxref=Genbank:WP_230439341.1;Name=WP_230439341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH41_RS00835;product=pilin;protein_id=WP_230439341.1;transl_table=11 NZ_CP087680.1 RefSeq gene 161599 162483 . - . ID=gene-LPH41_RS00840;Name=LPH41_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00840;old_locus_tag=LPH41_00840 NZ_CP087680.1 Protein Homology CDS 161599 162483 . - 0 ID=cds-WP_114867111.1;Parent=gene-LPH41_RS00840;Dbxref=Genbank:WP_114867111.1;Name=WP_114867111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.2;locus_tag=LPH41_RS00840;product=hypothetical protein;protein_id=WP_114867111.1;transl_table=11 NZ_CP087680.1 RefSeq gene 162498 163844 . - . ID=gene-LPH41_RS00845;Name=LPH41_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00845;old_locus_tag=LPH41_00845 NZ_CP087680.1 Protein Homology CDS 162498 163844 . - 0 ID=cds-WP_114867110.1;Parent=gene-LPH41_RS00845;Dbxref=Genbank:WP_114867110.1;Name=WP_114867110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085030.1;locus_tag=LPH41_RS00845;product=DEAD/DEAH box helicase;protein_id=WP_114867110.1;transl_table=11 NZ_CP087680.1 RefSeq gene 163920 164270 . + . ID=gene-LPH41_RS00850;Name=LPH41_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00850;old_locus_tag=LPH41_00850 NZ_CP087680.1 Protein Homology CDS 163920 164270 . + 0 ID=cds-WP_114867109.1;Parent=gene-LPH41_RS00850;Dbxref=Genbank:WP_114867109.1;Name=WP_114867109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382639.1;locus_tag=LPH41_RS00850;product=DUF1640 domain-containing protein;protein_id=WP_114867109.1;transl_table=11 NZ_CP087680.1 RefSeq gene 164272 164544 . - . ID=gene-LPH41_RS00855;Name=LPH41_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00855;old_locus_tag=LPH41_00855 NZ_CP087680.1 Protein Homology CDS 164272 164544 . - 0 ID=cds-WP_114867070.1;Parent=gene-LPH41_RS00855;Dbxref=Genbank:WP_114867070.1;Name=WP_114867070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382732.1;locus_tag=LPH41_RS00855;product=VRR-NUC domain-containing protein;protein_id=WP_114867070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 164548 165741 . - . ID=gene-LPH41_RS00860;Name=LPH41_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00860;old_locus_tag=LPH41_00860 NZ_CP087680.1 GeneMarkS-2+ CDS 164548 165741 . - 0 ID=cds-WP_230439301.1;Parent=gene-LPH41_RS00860;Dbxref=Genbank:WP_230439301.1;Name=WP_230439301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00860;product=hypothetical protein;protein_id=WP_230439301.1;transl_table=11 NZ_CP087680.1 RefSeq gene 165698 166396 . + . ID=gene-LPH41_RS00865;Name=LPH41_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00865;old_locus_tag=LPH41_00865 NZ_CP087680.1 Protein Homology CDS 165698 166396 . + 0 ID=cds-WP_114867108.1;Parent=gene-LPH41_RS00865;Dbxref=Genbank:WP_114867108.1;Name=WP_114867108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852371.1;locus_tag=LPH41_RS00865;product=hypothetical protein;protein_id=WP_114867108.1;transl_table=11 NZ_CP087680.1 RefSeq gene 166498 166752 . + . ID=gene-LPH41_RS00870;Name=LPH41_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00870;old_locus_tag=LPH41_00870 NZ_CP087680.1 Protein Homology CDS 166498 166752 . + 0 ID=cds-WP_038273324.1;Parent=gene-LPH41_RS00870;Dbxref=Genbank:WP_038273324.1;Name=WP_038273324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089517.1;locus_tag=LPH41_RS00870;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_038273324.1;transl_table=11 NZ_CP087680.1 RefSeq gene 166749 167084 . + . ID=gene-LPH41_RS00875;Name=LPH41_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00875;old_locus_tag=LPH41_00875 NZ_CP087680.1 Protein Homology CDS 166749 167084 . + 0 ID=cds-WP_038273322.1;Parent=gene-LPH41_RS00875;Dbxref=Genbank:WP_038273322.1;Name=WP_038273322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085025.1;locus_tag=LPH41_RS00875;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_038273322.1;transl_table=11 NZ_CP087680.1 RefSeq gene 167337 167738 . + . ID=gene-LPH41_RS00880;Name=LPH41_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00880;old_locus_tag=LPH41_00880 NZ_CP087680.1 Protein Homology CDS 167337 167738 . + 0 ID=cds-WP_114867107.1;Parent=gene-LPH41_RS00880;Dbxref=Genbank:WP_114867107.1;Name=WP_114867107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853008.1;locus_tag=LPH41_RS00880;product=lysozyme;protein_id=WP_114867107.1;transl_table=11 NZ_CP087680.1 RefSeq gene 167759 168139 . + . ID=gene-LPH41_RS00885;Name=LPH41_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00885;old_locus_tag=LPH41_00885 NZ_CP087680.1 Protein Homology CDS 167759 168139 . + 0 ID=cds-WP_230439302.1;Parent=gene-LPH41_RS00885;Dbxref=Genbank:WP_230439302.1;Name=WP_230439302.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016359.2;locus_tag=LPH41_RS00885;product=phage terminase large subunit;protein_id=WP_230439302.1;transl_table=11 NZ_CP087680.1 RefSeq gene 168087 168842 . + . ID=gene-LPH41_RS00890;Name=LPH41_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00890;old_locus_tag=LPH41_00890 NZ_CP087680.1 GeneMarkS-2+ CDS 168087 168842 . + 0 ID=cds-WP_230439303.1;Parent=gene-LPH41_RS00890;Dbxref=Genbank:WP_230439303.1;Name=WP_230439303.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00890;product=hypothetical protein;protein_id=WP_230439303.1;transl_table=11 NZ_CP087680.1 RefSeq gene 168839 169555 . + . ID=gene-LPH41_RS00895;Name=LPH41_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00895;old_locus_tag=LPH41_00895 NZ_CP087680.1 Protein Homology CDS 168839 169555 . + 0 ID=cds-WP_160165226.1;Parent=gene-LPH41_RS00895;Dbxref=Genbank:WP_160165226.1;Name=WP_160165226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027825.2;locus_tag=LPH41_RS00895;product=portal protein;protein_id=WP_160165226.1;transl_table=11 NZ_CP087680.1 RefSeq gene 169627 169947 . + . ID=gene-LPH41_RS00900;Name=LPH41_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00900;old_locus_tag=LPH41_00900 NZ_CP087680.1 GeneMarkS-2+ CDS 169627 169947 . + 0 ID=cds-WP_038272832.1;Parent=gene-LPH41_RS00900;Dbxref=Genbank:WP_038272832.1;Name=WP_038272832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00900;product=hypothetical protein;protein_id=WP_038272832.1;transl_table=11 NZ_CP087680.1 RefSeq gene 170449 171657 . - . ID=gene-LPH41_RS00905;Name=LPH41_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00905;old_locus_tag=LPH41_00905 NZ_CP087680.1 Protein Homology CDS 170449 171657 . - 0 ID=cds-WP_038272829.1;Parent=gene-LPH41_RS00905;Dbxref=Genbank:WP_038272829.1;Name=WP_038272829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851071.1;locus_tag=LPH41_RS00905;product=hypothetical protein;protein_id=WP_038272829.1;transl_table=11 NZ_CP087680.1 RefSeq gene 171967 172518 . - . ID=gene-LPH41_RS00910;Name=LPH41_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00910;old_locus_tag=LPH41_00910 NZ_CP087680.1 Protein Homology CDS 171967 172518 . - 0 ID=cds-WP_038272837.1;Parent=gene-LPH41_RS00910;Dbxref=Genbank:WP_038272837.1;Name=WP_038272837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851072.1;locus_tag=LPH41_RS00910;product=TlpA disulfide reductase family protein;protein_id=WP_038272837.1;transl_table=11 NZ_CP087680.1 RefSeq gene 174903 175067 . + . ID=gene-LPH41_RS00915;Name=LPH41_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00915;old_locus_tag=LPH41_00915 NZ_CP087680.1 GeneMarkS-2+ CDS 174903 175067 . + 0 ID=cds-WP_160165225.1;Parent=gene-LPH41_RS00915;Dbxref=Genbank:WP_160165225.1;Name=WP_160165225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00915;product=hypothetical protein;protein_id=WP_160165225.1;transl_table=11 NZ_CP087680.1 RefSeq gene 175159 176355 . + . ID=gene-LPH41_RS00920;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LPH41_RS00920;old_locus_tag=LPH41_00920 NZ_CP087680.1 Protein Homology CDS 175159 176355 . + 0 ID=cds-WP_038272824.1;Parent=gene-LPH41_RS00920;Dbxref=Genbank:WP_038272824.1;Name=WP_038272824.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851073.1;locus_tag=LPH41_RS00920;product=GTP cyclohydrolase II RibA;protein_id=WP_038272824.1;transl_table=11 NZ_CP087680.1 RefSeq gene 177204 178238 . - . ID=gene-LPH41_RS00925;Name=LPH41_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00925;old_locus_tag=LPH41_00925 NZ_CP087680.1 Protein Homology CDS 177204 178238 . - 0 ID=cds-WP_038272823.1;Parent=gene-LPH41_RS00925;Dbxref=Genbank:WP_038272823.1;Name=WP_038272823.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851074.1;locus_tag=LPH41_RS00925;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_038272823.1;transl_table=11 NZ_CP087680.1 RefSeq gene 178235 179098 . - . ID=gene-LPH41_RS00930;Name=LPH41_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00930;old_locus_tag=LPH41_00930 NZ_CP087680.1 Protein Homology CDS 178235 179098 . - 0 ID=cds-WP_051482381.1;Parent=gene-LPH41_RS00930;Dbxref=Genbank:WP_051482381.1;Name=WP_051482381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085488.1;locus_tag=LPH41_RS00930;product=glycosyltransferase family 2 protein;protein_id=WP_051482381.1;transl_table=11 NZ_CP087680.1 RefSeq gene 179138 180367 . - . ID=gene-LPH41_RS00935;Name=LPH41_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00935;old_locus_tag=LPH41_00935 NZ_CP087680.1 Protein Homology CDS 179138 180367 . - 0 ID=cds-WP_038272822.1;Parent=gene-LPH41_RS00935;Dbxref=Genbank:WP_038272822.1;Name=WP_038272822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851076.1;locus_tag=LPH41_RS00935;product=O-antigen ligase;protein_id=WP_038272822.1;transl_table=11 NZ_CP087680.1 RefSeq gene 180642 180908 . - . ID=gene-LPH41_RS00940;Name=LPH41_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00940;old_locus_tag=LPH41_00940 NZ_CP087680.1 GeneMarkS-2+ CDS 180642 180908 . - 0 ID=cds-WP_114867105.1;Parent=gene-LPH41_RS00940;Dbxref=Genbank:WP_114867105.1;Name=WP_114867105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00940;product=hypothetical protein;protein_id=WP_114867105.1;transl_table=11 NZ_CP087680.1 RefSeq gene 181418 181792 . + . ID=gene-LPH41_RS00945;Name=LPH41_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00945;old_locus_tag=LPH41_00945 NZ_CP087680.1 Protein Homology CDS 181418 181792 . + 0 ID=cds-WP_038272819.1;Parent=gene-LPH41_RS00945;Dbxref=Genbank:WP_038272819.1;Name=WP_038272819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607712.1;locus_tag=LPH41_RS00945;product=helix-turn-helix transcriptional regulator;protein_id=WP_038272819.1;transl_table=11 NZ_CP087680.1 RefSeq gene 181844 182533 . + . ID=gene-LPH41_RS00950;Name=LPH41_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00950;old_locus_tag=LPH41_00950 NZ_CP087680.1 Protein Homology CDS 181844 182533 . + 0 ID=cds-WP_038272817.1;Parent=gene-LPH41_RS00950;Dbxref=Genbank:WP_038272817.1;Name=WP_038272817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085492.1;locus_tag=LPH41_RS00950;product=DUF3426 domain-containing protein;protein_id=WP_038272817.1;transl_table=11 NZ_CP087680.1 RefSeq gene 182619 182891 . + . ID=gene-LPH41_RS00955;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LPH41_RS00955;old_locus_tag=LPH41_00955 NZ_CP087680.1 Protein Homology CDS 182619 182891 . + 0 ID=cds-WP_038272815.1;Parent=gene-LPH41_RS00955;Dbxref=Genbank:WP_038272815.1;Name=WP_038272815.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091159.1;locus_tag=LPH41_RS00955;product=DNA-binding transcriptional regulator Fis;protein_id=WP_038272815.1;transl_table=11 NZ_CP087680.1 RefSeq gene 183110 183451 . + . ID=gene-LPH41_RS00960;Name=LPH41_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00960;old_locus_tag=LPH41_00960 NZ_CP087680.1 GeneMarkS-2+ CDS 183110 183451 . + 0 ID=cds-WP_038272812.1;Parent=gene-LPH41_RS00960;Dbxref=Genbank:WP_038272812.1;Name=WP_038272812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00960;product=hypothetical protein;protein_id=WP_038272812.1;transl_table=11 NZ_CP087680.1 RefSeq gene 183615 183932 . + . ID=gene-LPH41_RS00965;Name=LPH41_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00965;old_locus_tag=LPH41_00965 NZ_CP087680.1 GeneMarkS-2+ CDS 183615 183932 . + 0 ID=cds-WP_152536663.1;Parent=gene-LPH41_RS00965;Dbxref=Genbank:WP_152536663.1;Name=WP_152536663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS00965;product=hypothetical protein;protein_id=WP_152536663.1;transl_table=11 NZ_CP087680.1 RefSeq gene 184043 185131 . - . ID=gene-LPH41_RS00970;Name=LPH41_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00970;old_locus_tag=LPH41_00970 NZ_CP087680.1 Protein Homology CDS 184043 185131 . - 0 ID=cds-WP_038272810.1;Parent=gene-LPH41_RS00970;Dbxref=Genbank:WP_038272810.1;Name=WP_038272810.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036086.1;locus_tag=LPH41_RS00970;product=branched-chain amino acid aminotransferase;protein_id=WP_038272810.1;transl_table=11 NZ_CP087680.1 RefSeq gene 185190 185741 . - . ID=gene-LPH41_RS00975;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=LPH41_RS00975;old_locus_tag=LPH41_00975 NZ_CP087680.1 Protein Homology CDS 185190 185741 . - 0 ID=cds-WP_038272808.1;Parent=gene-LPH41_RS00975;Dbxref=Genbank:WP_038272808.1;Name=WP_038272808.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=sufT;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488784.1;locus_tag=LPH41_RS00975;product=putative Fe-S cluster assembly protein SufT;protein_id=WP_038272808.1;transl_table=11 NZ_CP087680.1 RefSeq gene 185872 186291 . + . ID=gene-LPH41_RS00980;Name=LPH41_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00980;old_locus_tag=LPH41_00980 NZ_CP087680.1 Protein Homology CDS 185872 186291 . + 0 ID=cds-WP_038269965.1;Parent=gene-LPH41_RS00980;Dbxref=Genbank:WP_038269965.1;Name=WP_038269965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156959.1;locus_tag=LPH41_RS00980;product=hypothetical protein;protein_id=WP_038269965.1;transl_table=11 NZ_CP087680.1 RefSeq gene 186503 188767 . - . ID=gene-LPH41_RS00985;Name=LPH41_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00985;old_locus_tag=LPH41_00985 NZ_CP087680.1 Protein Homology CDS 186503 188767 . - 0 ID=cds-WP_038270283.1;Parent=gene-LPH41_RS00985;Dbxref=Genbank:WP_038270283.1;Name=WP_038270283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356619.1;locus_tag=LPH41_RS00985;product=DUF1631 domain-containing protein;protein_id=WP_038270283.1;transl_table=11 NZ_CP087680.1 RefSeq gene 189032 190414 . - . ID=gene-LPH41_RS00990;Name=LPH41_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00990;old_locus_tag=LPH41_00990 NZ_CP087680.1 Protein Homology CDS 189032 190414 . - 0 ID=cds-WP_081755389.1;Parent=gene-LPH41_RS00990;Dbxref=Genbank:WP_081755389.1;Name=WP_081755389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851083.1;locus_tag=LPH41_RS00990;product=DUF1631 family protein;protein_id=WP_081755389.1;transl_table=11 NZ_CP087680.1 RefSeq gene 190599 191174 . + . ID=gene-LPH41_RS00995;Name=LPH41_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS00995;old_locus_tag=LPH41_00995 NZ_CP087680.1 Protein Homology CDS 190599 191174 . + 0 ID=cds-WP_038269967.1;Parent=gene-LPH41_RS00995;Dbxref=Genbank:WP_038269967.1;Name=WP_038269967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091174.1;locus_tag=LPH41_RS00995;product=nitroreductase;protein_id=WP_038269967.1;transl_table=11 NZ_CP087680.1 RefSeq gene 191683 191973 . - . ID=gene-LPH41_RS01000;Name=LPH41_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01000;old_locus_tag=LPH41_01000 NZ_CP087680.1 GeneMarkS-2+ CDS 191683 191973 . - 0 ID=cds-WP_038269970.1;Parent=gene-LPH41_RS01000;Dbxref=Genbank:WP_038269970.1;Name=WP_038269970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01000;product=hypothetical protein;protein_id=WP_038269970.1;transl_table=11 NZ_CP087680.1 RefSeq gene 192250 192801 . + . ID=gene-LPH41_RS01005;Name=LPH41_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01005;old_locus_tag=LPH41_01005 NZ_CP087680.1 Protein Homology CDS 192250 192801 . + 0 ID=cds-WP_038269973.1;Parent=gene-LPH41_RS01005;Dbxref=Genbank:WP_038269973.1;Name=WP_038269973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382549.1;locus_tag=LPH41_RS01005;product=NUDIX hydrolase;protein_id=WP_038269973.1;transl_table=11 NZ_CP087680.1 RefSeq gene 192911 194239 . - . ID=gene-LPH41_RS01010;Name=LPH41_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01010;old_locus_tag=LPH41_01010 NZ_CP087680.1 Protein Homology CDS 192911 194239 . - 0 ID=cds-WP_230439304.1;Parent=gene-LPH41_RS01010;Dbxref=Genbank:WP_230439304.1;Name=WP_230439304.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085379.1;locus_tag=LPH41_RS01010;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_230439304.1;transl_table=11 NZ_CP087680.1 RefSeq gene 194248 194790 . - . ID=gene-LPH41_RS01015;Name=LPH41_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01015;old_locus_tag=LPH41_01015 NZ_CP087680.1 Protein Homology CDS 194248 194790 . - 0 ID=cds-WP_038269978.1;Parent=gene-LPH41_RS01015;Dbxref=Genbank:WP_038269978.1;Name=WP_038269978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156855.1;locus_tag=LPH41_RS01015;product=YecA family protein;protein_id=WP_038269978.1;transl_table=11 NZ_CP087680.1 RefSeq gene 194949 195170 . + . ID=gene-LPH41_RS01020;Name=LPH41_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01020;old_locus_tag=LPH41_01020 NZ_CP087680.1 Protein Homology CDS 194949 195170 . + 0 ID=cds-WP_038269981.1;Parent=gene-LPH41_RS01020;Dbxref=Genbank:WP_038269981.1;Name=WP_038269981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812462.1;locus_tag=LPH41_RS01020;product=TIGR02449 family protein;protein_id=WP_038269981.1;transl_table=11 NZ_CP087680.1 RefSeq gene 195167 195466 . + . ID=gene-LPH41_RS01025;Name=LPH41_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01025;old_locus_tag=LPH41_01025 NZ_CP087680.1 Protein Homology CDS 195167 195466 . + 0 ID=cds-WP_038269984.1;Parent=gene-LPH41_RS01025;Dbxref=Genbank:WP_038269984.1;Name=WP_038269984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894469.1;locus_tag=LPH41_RS01025;product=cell division protein ZapA;protein_id=WP_038269984.1;transl_table=11 NZ_CP087680.1 RefSeq gene 195568 195752 . + . ID=gene-LPH41_RS01030;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LPH41_RS01030;old_locus_tag=LPH41_01030 NZ_CP087680.1 cmsearch ncRNA 195568 195752 . + . ID=rna-LPH41_RS01030;Parent=gene-LPH41_RS01030;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS01030;product=6S RNA NZ_CP087680.1 cmsearch exon 195568 195752 . + . ID=exon-LPH41_RS01030-1;Parent=rna-LPH41_RS01030;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS01030;product=6S RNA NZ_CP087680.1 RefSeq gene 196754 197341 . + . ID=gene-LPH41_RS01035;Name=LPH41_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01035;old_locus_tag=LPH41_01035 NZ_CP087680.1 Protein Homology CDS 196754 197341 . + 0 ID=cds-WP_038269986.1;Parent=gene-LPH41_RS01035;Dbxref=Genbank:WP_038269986.1;Name=WP_038269986.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091180.1;locus_tag=LPH41_RS01035;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_038269986.1;transl_table=11 NZ_CP087680.1 RefSeq gene 197338 197808 . + . ID=gene-LPH41_RS01040;Name=LPH41_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01040;old_locus_tag=LPH41_01040 NZ_CP087680.1 Protein Homology CDS 197338 197808 . + 0 ID=cds-WP_038269989.1;Parent=gene-LPH41_RS01040;Dbxref=Genbank:WP_038269989.1;Name=WP_038269989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091182.1;locus_tag=LPH41_RS01040;product=EVE domain-containing protein;protein_id=WP_038269989.1;transl_table=11 NZ_CP087680.1 RefSeq gene 197867 198514 . + . ID=gene-LPH41_RS01045;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LPH41_RS01045;old_locus_tag=LPH41_01045 NZ_CP087680.1 Protein Homology CDS 197867 198514 . + 0 ID=cds-WP_038269991.1;Parent=gene-LPH41_RS01045;Dbxref=Genbank:WP_038269991.1;Name=WP_038269991.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994531.1;locus_tag=LPH41_RS01045;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_038269991.1;transl_table=11 NZ_CP087680.1 RefSeq gene 198718 199266 . - . ID=gene-LPH41_RS01050;Name=LPH41_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01050;old_locus_tag=LPH41_01050 NZ_CP087680.1 Protein Homology CDS 198718 199266 . - 0 ID=cds-WP_038269994.1;Parent=gene-LPH41_RS01050;Dbxref=Genbank:WP_038269994.1;Name=WP_038269994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452585.1;locus_tag=LPH41_RS01050;product=hypothetical protein;protein_id=WP_038269994.1;transl_table=11 NZ_CP087680.1 RefSeq gene 199663 201321 . - . ID=gene-LPH41_RS01055;Name=LPH41_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01055;old_locus_tag=LPH41_01055 NZ_CP087680.1 Protein Homology CDS 199663 201321 . - 0 ID=cds-WP_230439305.1;Parent=gene-LPH41_RS01055;Dbxref=Genbank:WP_230439305.1;Name=WP_230439305.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573327.1;locus_tag=LPH41_RS01055;product=Na+/H+ antiporter;protein_id=WP_230439305.1;transl_table=11 NZ_CP087680.1 RefSeq gene 202067 202258 . - . ID=gene-LPH41_RS01060;Name=LPH41_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01060;old_locus_tag=LPH41_01060 NZ_CP087680.1 GeneMarkS-2+ CDS 202067 202258 . - 0 ID=cds-WP_230439306.1;Parent=gene-LPH41_RS01060;Dbxref=Genbank:WP_230439306.1;Name=WP_230439306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01060;product=hypothetical protein;protein_id=WP_230439306.1;transl_table=11 NZ_CP087680.1 RefSeq gene 202243 202455 . - . ID=gene-LPH41_RS01065;Name=LPH41_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01065;old_locus_tag=LPH41_01065 NZ_CP087680.1 GeneMarkS-2+ CDS 202243 202455 . - 0 ID=cds-WP_051482237.1;Parent=gene-LPH41_RS01065;Dbxref=Genbank:WP_051482237.1;Name=WP_051482237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01065;product=hypothetical protein;protein_id=WP_051482237.1;transl_table=11 NZ_CP087680.1 RefSeq gene 203449 203571 . - . ID=gene-LPH41_RS11930;Name=LPH41_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11930 NZ_CP087680.1 GeneMarkS-2+ CDS 203449 203571 . - 0 ID=cds-WP_268980364.1;Parent=gene-LPH41_RS11930;Dbxref=Genbank:WP_268980364.1;Name=WP_268980364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11930;product=hypothetical protein;protein_id=WP_268980364.1;transl_table=11 NZ_CP087680.1 RefSeq gene 203970 205415 . + . ID=gene-LPH41_RS01070;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=LPH41_RS01070;old_locus_tag=LPH41_01070 NZ_CP087680.1 Protein Homology CDS 203970 205415 . + 0 ID=cds-WP_038270002.1;Parent=gene-LPH41_RS01070;Dbxref=Genbank:WP_038270002.1;Name=WP_038270002.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366550.1;locus_tag=LPH41_RS01070;product=exodeoxyribonuclease I;protein_id=WP_038270002.1;transl_table=11 NZ_CP087680.1 RefSeq gene 205412 206098 . + . ID=gene-LPH41_RS01075;Name=LPH41_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01075;old_locus_tag=LPH41_01075 NZ_CP087680.1 Protein Homology CDS 205412 206098 . + 0 ID=cds-WP_038270005.1;Parent=gene-LPH41_RS01075;Dbxref=Genbank:WP_038270005.1;Name=WP_038270005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996685.1;locus_tag=LPH41_RS01075;product=TIGR02453 family protein;protein_id=WP_038270005.1;transl_table=11 NZ_CP087680.1 RefSeq gene 206539 207597 . + . ID=gene-LPH41_RS01080;Name=LPH41_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01080;old_locus_tag=LPH41_01080 NZ_CP087680.1 Protein Homology CDS 206539 207597 . + 0 ID=cds-WP_051482238.1;Parent=gene-LPH41_RS01080;Dbxref=Genbank:WP_051482238.1;Name=WP_051482238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894481.1;locus_tag=LPH41_RS01080;product=MBL fold metallo-hydrolase;protein_id=WP_051482238.1;transl_table=11 NZ_CP087680.1 RefSeq gene 208692 209111 . - . ID=gene-LPH41_RS01085;Name=LPH41_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01085;old_locus_tag=LPH41_01085 NZ_CP087680.1 Protein Homology CDS 208692 209111 . - 0 ID=cds-WP_038270292.1;Parent=gene-LPH41_RS01085;Dbxref=Genbank:WP_038270292.1;Name=WP_038270292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086769.1;locus_tag=LPH41_RS01085;product=cupin domain-containing protein;protein_id=WP_038270292.1;transl_table=11 NZ_CP087680.1 RefSeq gene 209842 210300 . + . ID=gene-LPH41_RS01090;Name=LPH41_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01090;old_locus_tag=LPH41_01090 NZ_CP087680.1 GeneMarkS-2+ CDS 209842 210300 . + 0 ID=cds-WP_038270011.1;Parent=gene-LPH41_RS01090;Dbxref=Genbank:WP_038270011.1;Name=WP_038270011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01090;product=hypothetical protein;protein_id=WP_038270011.1;transl_table=11 NZ_CP087680.1 RefSeq gene 210760 211719 . - . ID=gene-LPH41_RS01095;Name=LPH41_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01095;old_locus_tag=LPH41_01095 NZ_CP087680.1 Protein Homology CDS 210760 211719 . - 0 ID=cds-WP_038270016.1;Parent=gene-LPH41_RS01095;Dbxref=Genbank:WP_038270016.1;Name=WP_038270016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894542.1;locus_tag=LPH41_RS01095;product=5'-nucleotidase;protein_id=WP_038270016.1;transl_table=11 NZ_CP087680.1 RefSeq gene 211805 212572 . - . ID=gene-LPH41_RS01100;Name=LPH41_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01100;old_locus_tag=LPH41_01100 NZ_CP087680.1 Protein Homology CDS 211805 212572 . - 0 ID=cds-WP_038270019.1;Parent=gene-LPH41_RS01100;Dbxref=Genbank:WP_038270019.1;Name=WP_038270019.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA,NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919766.1;locus_tag=LPH41_RS01100;product=NAD kinase;protein_id=WP_038270019.1;transl_table=11 NZ_CP087680.1 RefSeq gene 212668 217659 . - . ID=gene-LPH41_RS01105;Name=LPH41_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01105;old_locus_tag=LPH41_01105 NZ_CP087680.1 Protein Homology CDS 212668 217659 . - 0 ID=cds-WP_230439307.1;Parent=gene-LPH41_RS01105;Dbxref=Genbank:WP_230439307.1;Name=WP_230439307.1;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851123.1;locus_tag=LPH41_RS01105;product=NAD-glutamate dehydrogenase;protein_id=WP_230439307.1;transl_table=11 NZ_CP087680.1 RefSeq gene 218703 219896 . + . ID=gene-LPH41_RS01110;Name=LPH41_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01110;old_locus_tag=LPH41_01110 NZ_CP087680.1 Protein Homology CDS 218703 219896 . + 0 ID=cds-WP_038270025.1;Parent=gene-LPH41_RS01110;Dbxref=Genbank:WP_038270025.1;Name=WP_038270025.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086749.1;locus_tag=LPH41_RS01110;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038270025.1;transl_table=11 NZ_CP087680.1 RefSeq gene 219911 223078 . + . ID=gene-LPH41_RS01115;Name=LPH41_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01115;old_locus_tag=LPH41_01115 NZ_CP087680.1 Protein Homology CDS 219911 223078 . + 0 ID=cds-WP_038270028.1;Parent=gene-LPH41_RS01115;Dbxref=Genbank:WP_038270028.1;Name=WP_038270028.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851125.1;locus_tag=LPH41_RS01115;product=multidrug efflux RND transporter permease subunit;protein_id=WP_038270028.1;transl_table=11 NZ_CP087680.1 RefSeq gene 223274 223834 . - . ID=gene-LPH41_RS01120;Name=LPH41_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01120;old_locus_tag=LPH41_01120 NZ_CP087680.1 Protein Homology CDS 223274 223834 . - 0 ID=cds-WP_038270030.1;Parent=gene-LPH41_RS01120;Dbxref=Genbank:WP_038270030.1;Name=WP_038270030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382543.1;locus_tag=LPH41_RS01120;product=carbonate dehydratase;protein_id=WP_038270030.1;transl_table=11 NZ_CP087680.1 RefSeq gene 223897 224802 . - . ID=gene-LPH41_RS01125;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LPH41_RS01125;old_locus_tag=LPH41_01125 NZ_CP087680.1 Protein Homology CDS 223897 224802 . - 0 ID=cds-WP_171898079.1;Parent=gene-LPH41_RS01125;Dbxref=Genbank:WP_171898079.1;Name=WP_171898079.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051138.1;locus_tag=LPH41_RS01125;product=GTP cyclohydrolase FolE2;protein_id=WP_171898079.1;transl_table=11 NZ_CP087680.1 RefSeq gene 224955 225515 . - . ID=gene-LPH41_RS01130;Name=LPH41_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01130;old_locus_tag=LPH41_01130 NZ_CP087680.1 Protein Homology CDS 224955 225515 . - 0 ID=cds-WP_162814091.1;Parent=gene-LPH41_RS01130;Dbxref=Genbank:WP_162814091.1;Name=WP_162814091.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013670.2;locus_tag=LPH41_RS01130;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_162814091.1;transl_table=11 NZ_CP087680.1 RefSeq gene 225899 226123 . + . ID=gene-LPH41_RS01135;Name=LPH41_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01135;old_locus_tag=LPH41_01135 NZ_CP087680.1 Protein Homology CDS 225899 226123 . + 0 ID=cds-WP_038270037.1;Parent=gene-LPH41_RS01135;Dbxref=Genbank:WP_038270037.1;Name=WP_038270037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097784.1;locus_tag=LPH41_RS01135;product=hypothetical protein;protein_id=WP_038270037.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 226981 227118 . - . ID=gene-LPH41_RS01140;Name=LPH41_RS01140;end_range=227118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS01140;old_locus_tag=LPH41_01140;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 226981 227118 . - 0 ID=cds-LPH41_RS01140;Parent=gene-LPH41_RS01140;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=227118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LPH41_RS01140;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 227513 228400 . + . ID=gene-LPH41_RS01145;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=LPH41_RS01145;old_locus_tag=LPH41_01145 NZ_CP087680.1 Protein Homology CDS 227513 228400 . + 0 ID=cds-WP_230439308.1;Parent=gene-LPH41_RS01145;Dbxref=Genbank:WP_230439308.1;Name=WP_230439308.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851129.1;locus_tag=LPH41_RS01145;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_230439308.1;transl_table=11 NZ_CP087680.1 RefSeq gene 228476 229381 . + . ID=gene-LPH41_RS01150;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=LPH41_RS01150;old_locus_tag=LPH41_01150 NZ_CP087680.1 Protein Homology CDS 228476 229381 . + 0 ID=cds-WP_038270046.1;Parent=gene-LPH41_RS01150;Dbxref=Genbank:WP_038270046.1;Name=WP_038270046.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014404353.1;locus_tag=LPH41_RS01150;product=lipid A hydroxylase LpxO;protein_id=WP_038270046.1;transl_table=11 NZ_CP087680.1 RefSeq gene 230366 230962 . - . ID=gene-LPH41_RS01155;Name=LPH41_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01155;old_locus_tag=LPH41_01155 NZ_CP087680.1 Protein Homology CDS 230366 230962 . - 0 ID=cds-WP_230428282.1;Parent=gene-LPH41_RS01155;Dbxref=Genbank:WP_230428282.1;Name=WP_230428282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097781.1;locus_tag=LPH41_RS01155;product=YdcF family protein;protein_id=WP_230428282.1;transl_table=11 NZ_CP087680.1 RefSeq gene 231119 231286 . - . ID=gene-LPH41_RS01160;Name=LPH41_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01160;old_locus_tag=LPH41_01160 NZ_CP087680.1 GeneMarkS-2+ CDS 231119 231286 . - 0 ID=cds-WP_160165115.1;Parent=gene-LPH41_RS01160;Dbxref=Genbank:WP_160165115.1;Name=WP_160165115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01160;product=hypothetical protein;protein_id=WP_160165115.1;transl_table=11 NZ_CP087680.1 RefSeq gene 232566 234455 . + . ID=gene-LPH41_RS01165;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LPH41_RS01165;old_locus_tag=LPH41_01165 NZ_CP087680.1 Protein Homology CDS 232566 234455 . + 0 ID=cds-WP_038270052.1;Parent=gene-LPH41_RS01165;Dbxref=Genbank:WP_038270052.1;Name=WP_038270052.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437137.1;locus_tag=LPH41_RS01165;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_038270052.1;transl_table=11 NZ_CP087680.1 RefSeq gene 234760 235191 . + . ID=gene-LPH41_RS01170;Name=LPH41_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01170;old_locus_tag=LPH41_01170 NZ_CP087680.1 GeneMarkS-2+ CDS 234760 235191 . + 0 ID=cds-WP_038270055.1;Parent=gene-LPH41_RS01170;Dbxref=Genbank:WP_038270055.1;Name=WP_038270055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01170;product=hypothetical protein;protein_id=WP_038270055.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 235702 236484 . + . ID=gene-LPH41_RS01175;Name=LPH41_RS01175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS01175;old_locus_tag=LPH41_01175;partial=true;pseudo=true;start_range=.,235702 NZ_CP087680.1 Protein Homology CDS 235702 236484 . + 0 ID=cds-LPH41_RS01175;Parent=gene-LPH41_RS01175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908152.1;locus_tag=LPH41_RS01175;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,235702;transl_table=11 NZ_CP087680.1 RefSeq gene 236562 237347 . - . ID=gene-LPH41_RS01180;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LPH41_RS01180;old_locus_tag=LPH41_01180 NZ_CP087680.1 Protein Homology CDS 236562 237347 . - 0 ID=cds-WP_038270300.1;Parent=gene-LPH41_RS01180;Dbxref=Genbank:WP_038270300.1;Name=WP_038270300.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346074.1;locus_tag=LPH41_RS01180;product=3-oxoadipate enol-lactonase;protein_id=WP_038270300.1;transl_table=11 NZ_CP087680.1 RefSeq gene 237565 238035 . - . ID=gene-LPH41_RS01185;Name=LPH41_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01185;old_locus_tag=LPH41_01185 NZ_CP087680.1 Protein Homology CDS 237565 238035 . - 0 ID=cds-WP_081755393.1;Parent=gene-LPH41_RS01185;Dbxref=Genbank:WP_081755393.1;Name=WP_081755393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808472.1;locus_tag=LPH41_RS01185;product=hypothetical protein;protein_id=WP_081755393.1;transl_table=11 NZ_CP087680.1 RefSeq gene 238748 239752 . + . ID=gene-LPH41_RS01190;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LPH41_RS01190;old_locus_tag=LPH41_01190 NZ_CP087680.1 Protein Homology CDS 238748 239752 . + 0 ID=cds-WP_038270065.1;Parent=gene-LPH41_RS01190;Dbxref=Genbank:WP_038270065.1;Name=WP_038270065.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852618.1;locus_tag=LPH41_RS01190;product=porphobilinogen synthase;protein_id=WP_038270065.1;transl_table=11 NZ_CP087680.1 RefSeq gene 239667 240515 . - . ID=gene-LPH41_RS01195;Name=LPH41_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01195;old_locus_tag=LPH41_01195 NZ_CP087680.1 Protein Homology CDS 239667 240515 . - 0 ID=cds-WP_081755396.1;Parent=gene-LPH41_RS01195;Dbxref=Genbank:WP_081755396.1;Name=WP_081755396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340307.1;locus_tag=LPH41_RS01195;product=DNA/RNA non-specific endonuclease;protein_id=WP_081755396.1;transl_table=11 NZ_CP087680.1 RefSeq gene 241527 242834 . + . ID=gene-LPH41_RS01200;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LPH41_RS01200;old_locus_tag=LPH41_01200 NZ_CP087680.1 Protein Homology CDS 241527 242834 . + 0 ID=cds-WP_038270070.1;Parent=gene-LPH41_RS01200;Dbxref=Genbank:WP_038270070.1;Name=WP_038270070.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085701.1;locus_tag=LPH41_RS01200;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_038270070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 242995 243882 . - . ID=gene-LPH41_RS01205;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LPH41_RS01205;old_locus_tag=LPH41_01205 NZ_CP087680.1 Protein Homology CDS 242995 243882 . - 0 ID=cds-WP_051482243.1;Parent=gene-LPH41_RS01205;Dbxref=Genbank:WP_051482243.1;Name=WP_051482243.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852622.1;locus_tag=LPH41_RS01205;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_051482243.1;transl_table=11 NZ_CP087680.1 RefSeq gene 244889 245662 . + . ID=gene-LPH41_RS01210;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LPH41_RS01210;old_locus_tag=LPH41_01210 NZ_CP087680.1 Protein Homology CDS 244889 245662 . + 0 ID=cds-WP_038270076.1;Parent=gene-LPH41_RS01210;Dbxref=Genbank:WP_038270076.1;Name=WP_038270076.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852623.1;locus_tag=LPH41_RS01210;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_038270076.1;transl_table=11 NZ_CP087680.1 RefSeq gene 245659 246123 . + . ID=gene-LPH41_RS01215;Name=LPH41_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01215;old_locus_tag=LPH41_01215 NZ_CP087680.1 Protein Homology CDS 245659 246123 . + 0 ID=cds-WP_038270078.1;Parent=gene-LPH41_RS01215;Dbxref=Genbank:WP_038270078.1;Name=WP_038270078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916712.1;locus_tag=LPH41_RS01215;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_038270078.1;transl_table=11 NZ_CP087680.1 RefSeq gene 246957 248819 . + . ID=gene-LPH41_RS01220;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LPH41_RS01220;old_locus_tag=LPH41_01220 NZ_CP087680.1 Protein Homology CDS 246957 248819 . + 0 ID=cds-WP_038270083.1;Parent=gene-LPH41_RS01220;Dbxref=Genbank:WP_038270083.1;Name=WP_038270083.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098050.1;locus_tag=LPH41_RS01220;product=excinuclease ABC subunit UvrC;protein_id=WP_038270083.1;transl_table=11 NZ_CP087680.1 RefSeq gene 248819 249454 . + . ID=gene-LPH41_RS01225;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LPH41_RS01225;old_locus_tag=LPH41_01225 NZ_CP087680.1 Protein Homology CDS 248819 249454 . + 0 ID=cds-WP_038270086.1;Parent=gene-LPH41_RS01225;Dbxref=Genbank:WP_038270086.1;Name=WP_038270086.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894757.1;locus_tag=LPH41_RS01225;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_038270086.1;transl_table=11 NZ_CP087680.1 RefSeq gene 249491 249566 . + . ID=gene-LPH41_RS01230;Name=LPH41_RS01230;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS01230;old_locus_tag=LPH41_01230 NZ_CP087680.1 tRNAscan-SE tRNA 249491 249566 . + . ID=rna-LPH41_RS01230;Parent=gene-LPH41_RS01230;anticodon=(pos:249524..249526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS01230;product=tRNA-Gly NZ_CP087680.1 tRNAscan-SE exon 249491 249566 . + . ID=exon-LPH41_RS01230-1;Parent=rna-LPH41_RS01230;anticodon=(pos:249524..249526);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS01230;product=tRNA-Gly NZ_CP087680.1 RefSeq gene 249637 249710 . + . ID=gene-LPH41_RS01235;Name=LPH41_RS01235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS01235;old_locus_tag=LPH41_01235 NZ_CP087680.1 tRNAscan-SE tRNA 249637 249710 . + . ID=rna-LPH41_RS01235;Parent=gene-LPH41_RS01235;anticodon=(pos:249669..249671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS01235;product=tRNA-Cys NZ_CP087680.1 tRNAscan-SE exon 249637 249710 . + . ID=exon-LPH41_RS01235-1;Parent=rna-LPH41_RS01235;anticodon=(pos:249669..249671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS01235;product=tRNA-Cys NZ_CP087680.1 RefSeq gene 251465 253402 . - . ID=gene-LPH41_RS01240;Name=LPH41_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01240;old_locus_tag=LPH41_01240 NZ_CP087680.1 Protein Homology CDS 251465 253402 . - 0 ID=cds-WP_038270089.1;Parent=gene-LPH41_RS01240;Dbxref=Genbank:WP_038270089.1;Name=WP_038270089.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924596.1;locus_tag=LPH41_RS01240;product=ATP-binding cassette domain-containing protein;protein_id=WP_038270089.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 253555 255830 . + . ID=gene-LPH41_RS11935;Name=LPH41_RS11935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11935;pseudo=true NZ_CP087680.1 Protein Homology CDS 253555 255830 . + 0 ID=cds-LPH41_RS11935;Parent=gene-LPH41_RS11935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097995.1;locus_tag=LPH41_RS11935;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 255921 256592 . - . ID=gene-LPH41_RS01260;Name=LPH41_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01260;old_locus_tag=LPH41_01260 NZ_CP087680.1 Protein Homology CDS 255921 256592 . - 0 ID=cds-WP_038270092.1;Parent=gene-LPH41_RS01260;Dbxref=Genbank:WP_038270092.1;Name=WP_038270092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088644.1;locus_tag=LPH41_RS01260;product=DsbA family oxidoreductase;protein_id=WP_038270092.1;transl_table=11 NZ_CP087680.1 RefSeq gene 257926 260289 . + . ID=gene-LPH41_RS01265;Name=LPH41_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01265;old_locus_tag=LPH41_01265 NZ_CP087680.1 Protein Homology CDS 257926 260289 . + 0 ID=cds-WP_038270110.1;Parent=gene-LPH41_RS01265;Dbxref=Genbank:WP_038270110.1;Name=WP_038270110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086090.1;locus_tag=LPH41_RS01265;product=TonB-dependent receptor;protein_id=WP_038270110.1;transl_table=11 NZ_CP087680.1 RefSeq gene 261004 262698 . + . ID=gene-LPH41_RS01270;Name=LPH41_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01270;old_locus_tag=LPH41_01270 NZ_CP087680.1 Protein Homology CDS 261004 262698 . + 0 ID=cds-WP_038270112.1;Parent=gene-LPH41_RS01270;Dbxref=Genbank:WP_038270112.1;Name=WP_038270112.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088642.1;locus_tag=LPH41_RS01270;product=Kef family K(+) transporter;protein_id=WP_038270112.1;transl_table=11 NZ_CP087680.1 RefSeq gene 263176 264270 . + . ID=gene-LPH41_RS01275;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LPH41_RS01275;old_locus_tag=LPH41_01275 NZ_CP087680.1 Protein Homology CDS 263176 264270 . + 0 ID=cds-WP_038270114.1;Parent=gene-LPH41_RS01275;Dbxref=Genbank:WP_038270114.1;Name=WP_038270114.1;Ontology_term=GO:0015415,GO:0042301,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=pstS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966222.1;locus_tag=LPH41_RS01275;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_038270114.1;transl_table=11 NZ_CP087680.1 RefSeq gene 264382 265356 . + . ID=gene-LPH41_RS01280;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LPH41_RS01280;old_locus_tag=LPH41_01280 NZ_CP087680.1 Protein Homology CDS 264382 265356 . + 0 ID=cds-WP_038270116.1;Parent=gene-LPH41_RS01280;Dbxref=Genbank:WP_038270116.1;Name=WP_038270116.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572163.1;locus_tag=LPH41_RS01280;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_038270116.1;transl_table=11 NZ_CP087680.1 RefSeq gene 265356 266219 . + . ID=gene-LPH41_RS01285;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LPH41_RS01285;old_locus_tag=LPH41_01285 NZ_CP087680.1 Protein Homology CDS 265356 266219 . + 0 ID=cds-WP_038270121.1;Parent=gene-LPH41_RS01285;Dbxref=Genbank:WP_038270121.1;Name=WP_038270121.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155848.1;locus_tag=LPH41_RS01285;product=phosphate ABC transporter permease PstA;protein_id=WP_038270121.1;transl_table=11 NZ_CP087680.1 RefSeq gene 266240 267070 . + . ID=gene-LPH41_RS01290;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LPH41_RS01290;old_locus_tag=LPH41_01290 NZ_CP087680.1 Protein Homology CDS 266240 267070 . + 0 ID=cds-WP_038270123.1;Parent=gene-LPH41_RS01290;Dbxref=Genbank:WP_038270123.1;Name=WP_038270123.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237787.1;locus_tag=LPH41_RS01290;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_038270123.1;transl_table=11 NZ_CP087680.1 RefSeq gene 267089 267799 . + . ID=gene-LPH41_RS01295;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LPH41_RS01295;old_locus_tag=LPH41_01295 NZ_CP087680.1 Protein Homology CDS 267089 267799 . + 0 ID=cds-WP_038270125.1;Parent=gene-LPH41_RS01295;Dbxref=Genbank:WP_038270125.1;Name=WP_038270125.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894594.1;locus_tag=LPH41_RS01295;product=phosphate signaling complex protein PhoU;protein_id=WP_038270125.1;transl_table=11 NZ_CP087680.1 RefSeq gene 268045 268677 . + . ID=gene-LPH41_RS01300;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LPH41_RS01300;old_locus_tag=LPH41_01300 NZ_CP087680.1 Protein Homology CDS 268045 268677 . + 0 ID=cds-WP_038270127.1;Parent=gene-LPH41_RS01300;Dbxref=Genbank:WP_038270127.1;Name=WP_038270127.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086100.1;locus_tag=LPH41_RS01300;product=ribonuclease T;protein_id=WP_038270127.1;transl_table=11 NZ_CP087680.1 RefSeq gene 269801 270598 . + . ID=gene-LPH41_RS01305;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LPH41_RS01305;old_locus_tag=LPH41_01305 NZ_CP087680.1 Protein Homology CDS 269801 270598 . + 0 ID=cds-WP_038270130.1;Parent=gene-LPH41_RS01305;Dbxref=Genbank:WP_038270130.1;Name=WP_038270130.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098000.1;locus_tag=LPH41_RS01305;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_038270130.1;transl_table=11 NZ_CP087680.1 RefSeq gene 270635 271018 . + . ID=gene-LPH41_RS01310;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LPH41_RS01310;old_locus_tag=LPH41_01310 NZ_CP087680.1 Protein Homology CDS 270635 271018 . + 0 ID=cds-WP_038270131.1;Parent=gene-LPH41_RS01310;Dbxref=Genbank:WP_038270131.1;Name=WP_038270131.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894598.1;locus_tag=LPH41_RS01310;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_038270131.1;transl_table=11 NZ_CP087680.1 RefSeq gene 271032 271913 . + . ID=gene-LPH41_RS01315;Name=LPH41_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01315;old_locus_tag=LPH41_01315 NZ_CP087680.1 Protein Homology CDS 271032 271913 . + 0 ID=cds-WP_038270133.1;Parent=gene-LPH41_RS01315;Dbxref=Genbank:WP_038270133.1;Name=WP_038270133.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852663.1;locus_tag=LPH41_RS01315;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_038270133.1;transl_table=11 NZ_CP087680.1 RefSeq gene 273578 274423 . + . ID=gene-LPH41_RS01320;Name=LPH41_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01320;old_locus_tag=LPH41_01320 NZ_CP087680.1 Protein Homology CDS 273578 274423 . + 0 ID=cds-WP_114867100.1;Parent=gene-LPH41_RS01320;Dbxref=Genbank:WP_114867100.1;Name=WP_114867100.1;Ontology_term=GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;inference=COORDINATES: protein motif:HMM:TIGR02001.1;locus_tag=LPH41_RS01320;product=TorF family putative porin;protein_id=WP_114867100.1;transl_table=11 NZ_CP087680.1 RefSeq gene 274529 274618 . + . ID=gene-LPH41_RS01325;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LPH41_RS01325;old_locus_tag=LPH41_01325 NZ_CP087680.1 Protein Homology CDS 274529 274618 . + 0 ID=cds-WP_038270136.1;Parent=gene-LPH41_RS01325;Dbxref=Genbank:WP_038270136.1;Name=WP_038270136.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007681729.1;locus_tag=LPH41_RS01325;product=K(+)-transporting ATPase subunit F;protein_id=WP_038270136.1;transl_table=11 NZ_CP087680.1 RefSeq gene 274632 276335 . + . ID=gene-LPH41_RS01330;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LPH41_RS01330;old_locus_tag=LPH41_01330 NZ_CP087680.1 Protein Homology CDS 274632 276335 . + 0 ID=cds-WP_038270138.1;Parent=gene-LPH41_RS01330;Dbxref=Genbank:WP_038270138.1;Name=WP_038270138.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017461263.1;locus_tag=LPH41_RS01330;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_038270138.1;transl_table=11 NZ_CP087680.1 RefSeq gene 276351 278381 . + . ID=gene-LPH41_RS01335;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LPH41_RS01335;old_locus_tag=LPH41_01335 NZ_CP087680.1 Protein Homology CDS 276351 278381 . + 0 ID=cds-WP_038270140.1;Parent=gene-LPH41_RS01335;Dbxref=Genbank:WP_038270140.1;Name=WP_038270140.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018973802.1;locus_tag=LPH41_RS01335;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_038270140.1;transl_table=11 NZ_CP087680.1 RefSeq gene 278393 278977 . + . ID=gene-LPH41_RS01340;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LPH41_RS01340;old_locus_tag=LPH41_01340 NZ_CP087680.1 Protein Homology CDS 278393 278977 . + 0 ID=cds-WP_038270142.1;Parent=gene-LPH41_RS01340;Dbxref=Genbank:WP_038270142.1;Name=WP_038270142.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007807711.1;locus_tag=LPH41_RS01340;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_038270142.1;transl_table=11 NZ_CP087680.1 RefSeq gene 278974 281652 . + . ID=gene-LPH41_RS01345;Name=LPH41_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01345;old_locus_tag=LPH41_01345 NZ_CP087680.1 Protein Homology CDS 278974 281652 . + 0 ID=cds-WP_232120147.1;Parent=gene-LPH41_RS01345;Dbxref=Genbank:WP_232120147.1;Name=WP_232120147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014728.2;locus_tag=LPH41_RS01345;product=sensor histidine kinase KdpD;protein_id=WP_232120147.1;transl_table=11 NZ_CP087680.1 RefSeq gene 281649 282341 . + . ID=gene-LPH41_RS01350;Name=LPH41_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01350;old_locus_tag=LPH41_01350 NZ_CP087680.1 Protein Homology CDS 281649 282341 . + 0 ID=cds-WP_200866177.1;Parent=gene-LPH41_RS01350;Dbxref=Genbank:WP_200866177.1;Name=WP_200866177.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=LPH41_RS01350;product=response regulator;protein_id=WP_200866177.1;transl_table=11 NZ_CP087680.1 RefSeq gene 283170 283358 . + . ID=gene-LPH41_RS01355;Name=LPH41_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01355;old_locus_tag=LPH41_01355 NZ_CP087680.1 Protein Homology CDS 283170 283358 . + 0 ID=cds-WP_230428200.1;Parent=gene-LPH41_RS01355;Dbxref=Genbank:WP_230428200.1;Name=WP_230428200.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH41_RS01355;product=transposase;protein_id=WP_230428200.1;transl_table=11 NZ_CP087680.1 RefSeq gene 283477 283812 . + . ID=gene-LPH41_RS01360;Name=LPH41_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01360;old_locus_tag=LPH41_01360 NZ_CP087680.1 Protein Homology CDS 283477 283812 . + 0 ID=cds-WP_230428281.1;Parent=gene-LPH41_RS01360;Dbxref=Genbank:WP_230428281.1;Name=WP_230428281.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH41_RS01360;product=Tn3 family transposase;protein_id=WP_230428281.1;transl_table=11 NZ_CP087680.1 RefSeq gene 284193 284693 . - . ID=gene-LPH41_RS01365;Name=LPH41_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01365;old_locus_tag=LPH41_01365 NZ_CP087680.1 Protein Homology CDS 284193 284693 . - 0 ID=cds-WP_038270308.1;Parent=gene-LPH41_RS01365;Dbxref=Genbank:WP_038270308.1;Name=WP_038270308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018974382.1;locus_tag=LPH41_RS01365;product=dihydrofolate reductase;protein_id=WP_038270308.1;transl_table=11 NZ_CP087680.1 RefSeq gene 285016 285810 . - . ID=gene-LPH41_RS01370;Name=LPH41_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01370;old_locus_tag=LPH41_01370 NZ_CP087680.1 Protein Homology CDS 285016 285810 . - 0 ID=cds-WP_038270148.1;Parent=gene-LPH41_RS01370;Dbxref=Genbank:WP_038270148.1;Name=WP_038270148.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260172.1;locus_tag=LPH41_RS01370;product=thymidylate synthase;protein_id=WP_038270148.1;transl_table=11 NZ_CP087680.1 RefSeq gene 285807 286712 . - . ID=gene-LPH41_RS01375;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LPH41_RS01375;old_locus_tag=LPH41_01375 NZ_CP087680.1 Protein Homology CDS 285807 286712 . - 0 ID=cds-WP_038270310.1;Parent=gene-LPH41_RS01375;Dbxref=Genbank:WP_038270310.1;Name=WP_038270310.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085861.1;locus_tag=LPH41_RS01375;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_038270310.1;transl_table=11 NZ_CP087680.1 RefSeq gene 286799 287179 . - . ID=gene-LPH41_RS01380;Name=LPH41_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01380;old_locus_tag=LPH41_01380 NZ_CP087680.1 Protein Homology CDS 286799 287179 . - 0 ID=cds-WP_038270150.1;Parent=gene-LPH41_RS01380;Dbxref=Genbank:WP_038270150.1;Name=WP_038270150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811893.1;locus_tag=LPH41_RS01380;product=diacylglycerol kinase;protein_id=WP_038270150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 287488 288201 . - . ID=gene-LPH41_RS01385;Name=LPH41_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01385;old_locus_tag=LPH41_01385 NZ_CP087680.1 Protein Homology CDS 287488 288201 . - 0 ID=cds-WP_038270312.1;Parent=gene-LPH41_RS01385;Dbxref=Genbank:WP_038270312.1;Name=WP_038270312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661106.1;locus_tag=LPH41_RS01385;product=response regulator transcription factor;protein_id=WP_038270312.1;transl_table=11 NZ_CP087680.1 RefSeq gene 289559 290680 . - . ID=gene-LPH41_RS01390;Name=LPH41_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01390;old_locus_tag=LPH41_01390 NZ_CP087680.1 Protein Homology CDS 289559 290680 . - 0 ID=cds-WP_038270314.1;Parent=gene-LPH41_RS01390;Dbxref=Genbank:WP_038270314.1;Name=WP_038270314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098075.1;locus_tag=LPH41_RS01390;product=prephenate dehydrogenase;protein_id=WP_038270314.1;transl_table=11 NZ_CP087680.1 RefSeq gene 290985 292097 . - . ID=gene-LPH41_RS01395;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LPH41_RS01395;old_locus_tag=LPH41_01395 NZ_CP087680.1 Protein Homology CDS 290985 292097 . - 0 ID=cds-WP_114867099.1;Parent=gene-LPH41_RS01395;Dbxref=Genbank:WP_114867099.1;Name=WP_114867099.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438731.1;locus_tag=LPH41_RS01395;product=molecular chaperone DnaJ;protein_id=WP_114867099.1;transl_table=11 NZ_CP087680.1 RefSeq gene 292233 294146 . - . ID=gene-LPH41_RS01400;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LPH41_RS01400;old_locus_tag=LPH41_01400 NZ_CP087680.1 Protein Homology CDS 292233 294146 . - 0 ID=cds-WP_038270151.1;Parent=gene-LPH41_RS01400;Dbxref=Genbank:WP_038270151.1;Name=WP_038270151.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380232.1;locus_tag=LPH41_RS01400;product=molecular chaperone DnaK;protein_id=WP_038270151.1;transl_table=11 NZ_CP087680.1 RefSeq gene 294278 294796 . - . ID=gene-LPH41_RS01405;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LPH41_RS01405;old_locus_tag=LPH41_01405 NZ_CP087680.1 Protein Homology CDS 294278 294796 . - 0 ID=cds-WP_038270153.1;Parent=gene-LPH41_RS01405;Dbxref=Genbank:WP_038270153.1;Name=WP_038270153.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483633.1;locus_tag=LPH41_RS01405;product=nucleotide exchange factor GrpE;protein_id=WP_038270153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 294917 295966 . - . ID=gene-LPH41_RS01410;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LPH41_RS01410;old_locus_tag=LPH41_01410 NZ_CP087680.1 Protein Homology CDS 294917 295966 . - 0 ID=cds-WP_038270316.1;Parent=gene-LPH41_RS01410;Dbxref=Genbank:WP_038270316.1;Name=WP_038270316.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237768.1;locus_tag=LPH41_RS01410;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_038270316.1;transl_table=11 NZ_CP087680.1 RefSeq gene 296085 297758 . + . ID=gene-LPH41_RS01415;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LPH41_RS01415;old_locus_tag=LPH41_01415 NZ_CP087680.1 Protein Homology CDS 296085 297758 . + 0 ID=cds-WP_038270155.1;Parent=gene-LPH41_RS01415;Dbxref=Genbank:WP_038270155.1;Name=WP_038270155.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894789.1;locus_tag=LPH41_RS01415;product=DNA repair protein RecN;protein_id=WP_038270155.1;transl_table=11 NZ_CP087680.1 RefSeq gene 297894 298304 . - . ID=gene-LPH41_RS01420;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LPH41_RS01420;old_locus_tag=LPH41_01420 NZ_CP087680.1 Protein Homology CDS 297894 298304 . - 0 ID=cds-WP_038270156.1;Parent=gene-LPH41_RS01420;Dbxref=Genbank:WP_038270156.1;Name=WP_038270156.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804358.1;locus_tag=LPH41_RS01420;product=ferric iron uptake transcriptional regulator;protein_id=WP_038270156.1;transl_table=11 NZ_CP087680.1 RefSeq gene 298417 298809 . + . ID=gene-LPH41_RS01425;Name=LPH41_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01425;old_locus_tag=LPH41_01425 NZ_CP087680.1 Protein Homology CDS 298417 298809 . + 0 ID=cds-WP_038270157.1;Parent=gene-LPH41_RS01425;Dbxref=Genbank:WP_038270157.1;Name=WP_038270157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085841.1;locus_tag=LPH41_RS01425;product=outer membrane protein assembly factor BamE;protein_id=WP_038270157.1;transl_table=11 NZ_CP087680.1 RefSeq gene 298838 299092 . - . ID=gene-LPH41_RS01430;Name=LPH41_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01430;old_locus_tag=LPH41_01430 NZ_CP087680.1 Protein Homology CDS 298838 299092 . - 0 ID=cds-WP_038270165.1;Parent=gene-LPH41_RS01430;Dbxref=Genbank:WP_038270165.1;Name=WP_038270165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089800.1;locus_tag=LPH41_RS01430;product=RnfH family protein;protein_id=WP_038270165.1;transl_table=11 NZ_CP087680.1 RefSeq gene 299089 299526 . - . ID=gene-LPH41_RS01435;Name=LPH41_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01435;old_locus_tag=LPH41_01435 NZ_CP087680.1 Protein Homology CDS 299089 299526 . - 0 ID=cds-WP_038270167.1;Parent=gene-LPH41_RS01435;Dbxref=Genbank:WP_038270167.1;Name=WP_038270167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894793.1;locus_tag=LPH41_RS01435;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_038270167.1;transl_table=11 NZ_CP087680.1 RefSeq gene 299590 300093 . + . ID=gene-LPH41_RS01440;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LPH41_RS01440;old_locus_tag=LPH41_01440 NZ_CP087680.1 Protein Homology CDS 299590 300093 . + 0 ID=cds-WP_038270168.1;Parent=gene-LPH41_RS01440;Dbxref=Genbank:WP_038270168.1;Name=WP_038270168.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050971.1;locus_tag=LPH41_RS01440;product=SsrA-binding protein SmpB;protein_id=WP_038270168.1;transl_table=11 NZ_CP087680.1 RefSeq gene 300310 302829 . - . ID=gene-LPH41_RS01445;Name=LPH41_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01445;old_locus_tag=LPH41_01445 NZ_CP087680.1 Protein Homology CDS 300310 302829 . - 0 ID=cds-WP_230428199.1;Parent=gene-LPH41_RS01445;Dbxref=Genbank:WP_230428199.1;Name=WP_230428199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098080.1;locus_tag=LPH41_RS01445;product=autotransporter domain-containing protein;protein_id=WP_230428199.1;transl_table=11 NZ_CP087680.1 RefSeq gene 304323 304526 . - . ID=gene-LPH41_RS01450;Name=LPH41_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01450;old_locus_tag=LPH41_01450 NZ_CP087680.1 Protein Homology CDS 304323 304526 . - 0 ID=cds-WP_038270170.1;Parent=gene-LPH41_RS01450;Dbxref=Genbank:WP_038270170.1;Name=WP_038270170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419650.1;locus_tag=LPH41_RS01450;product=cold-shock protein;protein_id=WP_038270170.1;transl_table=11 NZ_CP087680.1 RefSeq gene 304615 305367 . - . ID=gene-LPH41_RS01455;Name=LPH41_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01455;old_locus_tag=LPH41_01455 NZ_CP087680.1 Protein Homology CDS 304615 305367 . - 0 ID=cds-WP_114867214.1;Parent=gene-LPH41_RS01455;Dbxref=Genbank:WP_114867214.1;Name=WP_114867214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408258.1;locus_tag=LPH41_RS01455;product=S-methyl-5'-thioinosine phosphorylase;protein_id=WP_114867214.1;transl_table=11 NZ_CP087680.1 RefSeq gene 305375 305929 . - . ID=gene-LPH41_RS01460;Name=LPH41_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01460;old_locus_tag=LPH41_01460 NZ_CP087680.1 Protein Homology CDS 305375 305929 . - 0 ID=cds-WP_038270175.1;Parent=gene-LPH41_RS01460;Dbxref=Genbank:WP_038270175.1;Name=WP_038270175.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449878.1;locus_tag=LPH41_RS01460;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_038270175.1;transl_table=11 NZ_CP087680.1 RefSeq gene 305929 306936 . - . ID=gene-LPH41_RS01465;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LPH41_RS01465;old_locus_tag=LPH41_01465 NZ_CP087680.1 Protein Homology CDS 305929 306936 . - 0 ID=cds-WP_038270178.1;Parent=gene-LPH41_RS01465;Dbxref=Genbank:WP_038270178.1;Name=WP_038270178.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851282.1;locus_tag=LPH41_RS01465;product=beta-N-acetylhexosaminidase;protein_id=WP_038270178.1;transl_table=11 NZ_CP087680.1 RefSeq gene 307223 307720 . - . ID=gene-LPH41_RS01470;Name=LPH41_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01470;old_locus_tag=LPH41_01470 NZ_CP087680.1 Protein Homology CDS 307223 307720 . - 0 ID=cds-WP_038270320.1;Parent=gene-LPH41_RS01470;Dbxref=Genbank:WP_038270320.1;Name=WP_038270320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851283.1;locus_tag=LPH41_RS01470;product=CYTH domain-containing protein;protein_id=WP_038270320.1;transl_table=11 NZ_CP087680.1 RefSeq gene 307783 309114 . - . ID=gene-LPH41_RS01475;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LPH41_RS01475;old_locus_tag=LPH41_01475 NZ_CP087680.1 Protein Homology CDS 307783 309114 . - 0 ID=cds-WP_038270321.1;Parent=gene-LPH41_RS01475;Dbxref=Genbank:WP_038270321.1;Name=WP_038270321.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337972.1;locus_tag=LPH41_RS01475;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_038270321.1;transl_table=11 NZ_CP087680.1 RefSeq gene 309305 310024 . + . ID=gene-LPH41_RS01480;Name=LPH41_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01480;old_locus_tag=LPH41_01480 NZ_CP087680.1 Protein Homology CDS 309305 310024 . + 0 ID=cds-WP_038270180.1;Parent=gene-LPH41_RS01480;Dbxref=Genbank:WP_038270180.1;Name=WP_038270180.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851284.1;locus_tag=LPH41_RS01480;product=response regulator;protein_id=WP_038270180.1;transl_table=11 NZ_CP087680.1 RefSeq gene 310250 311020 . - . ID=gene-LPH41_RS01485;Name=LPH41_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01485;old_locus_tag=LPH41_01485 NZ_CP087680.1 Protein Homology CDS 310250 311020 . - 0 ID=cds-WP_051482240.1;Parent=gene-LPH41_RS01485;Dbxref=Genbank:WP_051482240.1;Name=WP_051482240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851285.1;locus_tag=LPH41_RS01485;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WP_051482240.1;transl_table=11 NZ_CP087680.1 RefSeq gene 311884 313017 . - . ID=gene-LPH41_RS01490;Name=LPH41_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01490;old_locus_tag=LPH41_01490 NZ_CP087680.1 Protein Homology CDS 311884 313017 . - 0 ID=cds-WP_038270322.1;Parent=gene-LPH41_RS01490;Dbxref=Genbank:WP_038270322.1;Name=WP_038270322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098085.1;locus_tag=LPH41_RS01490;product=glycosyltransferase;protein_id=WP_038270322.1;transl_table=11 NZ_CP087680.1 RefSeq gene 313137 314669 . - . ID=gene-LPH41_RS01495;Name=LPH41_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01495;old_locus_tag=LPH41_01495 NZ_CP087680.1 Protein Homology CDS 313137 314669 . - 0 ID=cds-WP_038270183.1;Parent=gene-LPH41_RS01495;Dbxref=Genbank:WP_038270183.1;Name=WP_038270183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851287.1;locus_tag=LPH41_RS01495;product=lipopolysaccharide biosynthesis protein;protein_id=WP_038270183.1;transl_table=11 NZ_CP087680.1 RefSeq gene 314666 315037 . - . ID=gene-LPH41_RS01500;Name=LPH41_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01500;old_locus_tag=LPH41_01500 NZ_CP087680.1 GeneMarkS-2+ CDS 314666 315037 . - 0 ID=cds-WP_162814090.1;Parent=gene-LPH41_RS01500;Dbxref=Genbank:WP_162814090.1;Name=WP_162814090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01500;product=hypothetical protein;protein_id=WP_162814090.1;transl_table=11 NZ_CP087680.1 RefSeq gene 315277 316419 . - . ID=gene-LPH41_RS01505;Name=LPH41_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01505;old_locus_tag=LPH41_01505 NZ_CP087680.1 Protein Homology CDS 315277 316419 . - 0 ID=cds-WP_038270324.1;Parent=gene-LPH41_RS01505;Dbxref=Genbank:WP_038270324.1;Name=WP_038270324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851288.1;locus_tag=LPH41_RS01505;product=glycosyltransferase family 4 protein;protein_id=WP_038270324.1;transl_table=11 NZ_CP087680.1 RefSeq gene 316866 317951 . - . ID=gene-LPH41_RS01510;Name=LPH41_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01510;old_locus_tag=LPH41_01510 NZ_CP087680.1 Protein Homology CDS 316866 317951 . - 0 ID=cds-WP_230439312.1;Parent=gene-LPH41_RS01510;Dbxref=Genbank:WP_230439312.1;Name=WP_230439312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098087.1;locus_tag=LPH41_RS01510;product=acyltransferase family protein;protein_id=WP_230439312.1;transl_table=11 NZ_CP087680.1 RefSeq gene 317948 319210 . - . ID=gene-LPH41_RS01515;Name=LPH41_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01515;old_locus_tag=LPH41_01515 NZ_CP087680.1 Protein Homology CDS 317948 319210 . - 0 ID=cds-WP_171898077.1;Parent=gene-LPH41_RS01515;Dbxref=Genbank:WP_171898077.1;Name=WP_171898077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117349.1;locus_tag=LPH41_RS01515;product=polysaccharide biosynthesis protein GumE;protein_id=WP_171898077.1;transl_table=11 NZ_CP087680.1 RefSeq gene 319268 320722 . - . ID=gene-LPH41_RS01520;Name=LPH41_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01520;old_locus_tag=LPH41_01520 NZ_CP087680.1 Protein Homology CDS 319268 320722 . - 0 ID=cds-WP_038270186.1;Parent=gene-LPH41_RS01520;Dbxref=Genbank:WP_038270186.1;Name=WP_038270186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914017.1;locus_tag=LPH41_RS01520;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_038270186.1;transl_table=11 NZ_CP087680.1 RefSeq gene 320956 322356 . - . ID=gene-LPH41_RS01525;Name=LPH41_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01525;old_locus_tag=LPH41_01525 NZ_CP087680.1 Protein Homology CDS 320956 322356 . - 0 ID=cds-WP_171898076.1;Parent=gene-LPH41_RS01525;Dbxref=Genbank:WP_171898076.1;Name=WP_171898076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157116.1;locus_tag=LPH41_RS01525;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_171898076.1;transl_table=11 NZ_CP087680.1 RefSeq gene 322338 323036 . - . ID=gene-LPH41_RS01530;Name=LPH41_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01530;old_locus_tag=LPH41_01530 NZ_CP087680.1 Protein Homology CDS 322338 323036 . - 0 ID=cds-WP_038270191.1;Parent=gene-LPH41_RS01530;Dbxref=Genbank:WP_038270191.1;Name=WP_038270191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085793.1;locus_tag=LPH41_RS01530;product=polysaccharide export protein;protein_id=WP_038270191.1;transl_table=11 NZ_CP087680.1 RefSeq gene 323763 324836 . - . ID=gene-LPH41_RS01535;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LPH41_RS01535;old_locus_tag=LPH41_01535 NZ_CP087680.1 Protein Homology CDS 323763 324836 . - 0 ID=cds-WP_038270194.1;Parent=gene-LPH41_RS01535;Dbxref=Genbank:WP_038270194.1;Name=WP_038270194.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912018.1;locus_tag=LPH41_RS01535;product=3-isopropylmalate dehydrogenase;protein_id=WP_038270194.1;transl_table=11 NZ_CP087680.1 RefSeq gene 325446 326093 . - . ID=gene-LPH41_RS01540;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LPH41_RS01540;old_locus_tag=LPH41_01540 NZ_CP087680.1 Protein Homology CDS 325446 326093 . - 0 ID=cds-WP_038270325.1;Parent=gene-LPH41_RS01540;Dbxref=Genbank:WP_038270325.1;Name=WP_038270325.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301096.1;locus_tag=LPH41_RS01540;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_038270325.1;transl_table=11 NZ_CP087680.1 RefSeq gene 326396 327823 . - . ID=gene-LPH41_RS01545;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LPH41_RS01545;old_locus_tag=LPH41_01545 NZ_CP087680.1 Protein Homology CDS 326396 327823 . - 0 ID=cds-WP_038270200.1;Parent=gene-LPH41_RS01545;Dbxref=Genbank:WP_038270200.1;Name=WP_038270200.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015277365.1;locus_tag=LPH41_RS01545;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_038270200.1;transl_table=11 NZ_CP087680.1 RefSeq gene 329873 330199 . + . ID=gene-LPH41_RS01550;Name=LPH41_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01550;old_locus_tag=LPH41_01550 NZ_CP087680.1 GeneMarkS-2+ CDS 329873 330199 . + 0 ID=cds-WP_152536564.1;Parent=gene-LPH41_RS01550;Dbxref=Genbank:WP_152536564.1;Name=WP_152536564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01550;product=hypothetical protein;protein_id=WP_152536564.1;transl_table=11 NZ_CP087680.1 RefSeq gene 330196 330501 . + . ID=gene-LPH41_RS01555;Name=LPH41_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01555;old_locus_tag=LPH41_01555 NZ_CP087680.1 Protein Homology CDS 330196 330501 . + 0 ID=cds-WP_038270202.1;Parent=gene-LPH41_RS01555;Dbxref=Genbank:WP_038270202.1;Name=WP_038270202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090997.1;locus_tag=LPH41_RS01555;product=hypothetical protein;protein_id=WP_038270202.1;transl_table=11 NZ_CP087680.1 RefSeq gene 330707 330829 . - . ID=gene-LPH41_RS11940;Name=LPH41_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11940 NZ_CP087680.1 GeneMarkS-2+ CDS 330707 330829 . - 0 ID=cds-WP_267903177.1;Parent=gene-LPH41_RS11940;Dbxref=Genbank:WP_267903177.1;Name=WP_267903177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11940;product=hypothetical protein;protein_id=WP_267903177.1;transl_table=11 NZ_CP087680.1 RefSeq gene 330958 331194 . - . ID=gene-LPH41_RS01560;Name=LPH41_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01560;old_locus_tag=LPH41_01560 NZ_CP087680.1 GeneMarkS-2+ CDS 330958 331194 . - 0 ID=cds-WP_152536565.1;Parent=gene-LPH41_RS01560;Dbxref=Genbank:WP_152536565.1;Name=WP_152536565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01560;product=hypothetical protein;protein_id=WP_152536565.1;transl_table=11 NZ_CP087680.1 RefSeq gene 331509 332324 . - . ID=gene-LPH41_RS01565;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LPH41_RS01565;old_locus_tag=LPH41_01565 NZ_CP087680.1 Protein Homology CDS 331509 332324 . - 0 ID=cds-WP_038270204.1;Parent=gene-LPH41_RS01565;Dbxref=Genbank:WP_038270204.1;Name=WP_038270204.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171998.1;locus_tag=LPH41_RS01565;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_038270204.1;transl_table=11 NZ_CP087680.1 RefSeq gene 332509 333747 . + . ID=gene-LPH41_RS01570;Name=LPH41_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01570;old_locus_tag=LPH41_01570 NZ_CP087680.1 Protein Homology CDS 332509 333747 . + 0 ID=cds-WP_038270206.1;Parent=gene-LPH41_RS01570;Dbxref=Genbank:WP_038270206.1;Name=WP_038270206.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1;locus_tag=LPH41_RS01570;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038270206.1;transl_table=11 NZ_CP087680.1 RefSeq gene 333815 337042 . + . ID=gene-LPH41_RS01575;Name=LPH41_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01575;old_locus_tag=LPH41_01575 NZ_CP087680.1 Protein Homology CDS 333815 337042 . + 0 ID=cds-WP_038270209.1;Parent=gene-LPH41_RS01575;Dbxref=Genbank:WP_038270209.1;Name=WP_038270209.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852090.1;locus_tag=LPH41_RS01575;product=efflux RND transporter permease subunit;protein_id=WP_038270209.1;transl_table=11 NZ_CP087680.1 RefSeq gene 337131 340235 . + . ID=gene-LPH41_RS01580;Name=LPH41_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01580;old_locus_tag=LPH41_01580 NZ_CP087680.1 Protein Homology CDS 337131 340235 . + 0 ID=cds-WP_038270212.1;Parent=gene-LPH41_RS01580;Dbxref=Genbank:WP_038270212.1;Name=WP_038270212.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852089.1;locus_tag=LPH41_RS01580;product=efflux RND transporter permease subunit;protein_id=WP_038270212.1;transl_table=11 NZ_CP087680.1 RefSeq gene 340402 340953 . - . ID=gene-LPH41_RS01585;Name=LPH41_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01585;old_locus_tag=LPH41_01585 NZ_CP087680.1 Protein Homology CDS 340402 340953 . - 0 ID=cds-WP_230428197.1;Parent=gene-LPH41_RS01585;Dbxref=Genbank:WP_230428197.1;Name=WP_230428197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090977.1;locus_tag=LPH41_RS01585;product=hypothetical protein;protein_id=WP_230428197.1;transl_table=11 NZ_CP087680.1 RefSeq gene 341208 341474 . - . ID=gene-LPH41_RS01590;Name=LPH41_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01590;old_locus_tag=LPH41_01590 NZ_CP087680.1 GeneMarkS-2+ CDS 341208 341474 . - 0 ID=cds-WP_152536567.1;Parent=gene-LPH41_RS01590;Dbxref=Genbank:WP_152536567.1;Name=WP_152536567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01590;product=hypothetical protein;protein_id=WP_152536567.1;transl_table=11 NZ_CP087680.1 RefSeq gene 342241 342411 . - . ID=gene-LPH41_RS01595;Name=LPH41_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01595;old_locus_tag=LPH41_01595 NZ_CP087680.1 GeneMarkS-2+ CDS 342241 342411 . - 0 ID=cds-WP_160165118.1;Parent=gene-LPH41_RS01595;Dbxref=Genbank:WP_160165118.1;Name=WP_160165118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01595;product=hypothetical protein;protein_id=WP_160165118.1;transl_table=11 NZ_CP087680.1 RefSeq gene 342432 343397 . - . ID=gene-LPH41_RS01600;Name=LPH41_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01600;old_locus_tag=LPH41_01600 NZ_CP087680.1 Protein Homology CDS 342432 343397 . - 0 ID=cds-WP_038270221.1;Parent=gene-LPH41_RS01600;Dbxref=Genbank:WP_038270221.1;Name=WP_038270221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014402676.1;locus_tag=LPH41_RS01600;product=NADP-dependent oxidoreductase;protein_id=WP_038270221.1;transl_table=11 NZ_CP087680.1 RefSeq gene 343490 344539 . - . ID=gene-LPH41_RS01605;Name=LPH41_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01605;old_locus_tag=LPH41_01605 NZ_CP087680.1 Protein Homology CDS 343490 344539 . - 0 ID=cds-WP_038270222.1;Parent=gene-LPH41_RS01605;Dbxref=Genbank:WP_038270222.1;Name=WP_038270222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851301.1;locus_tag=LPH41_RS01605;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_038270222.1;transl_table=11 NZ_CP087680.1 RefSeq gene 344687 345100 . + . ID=gene-LPH41_RS01610;Name=LPH41_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01610;old_locus_tag=LPH41_01610 NZ_CP087680.1 GeneMarkS-2+ CDS 344687 345100 . + 0 ID=cds-WP_038270232.1;Parent=gene-LPH41_RS01610;Dbxref=Genbank:WP_038270232.1;Name=WP_038270232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01610;product=hypothetical protein;protein_id=WP_038270232.1;transl_table=11 NZ_CP087680.1 RefSeq gene 345378 345941 . - . ID=gene-LPH41_RS01615;Name=LPH41_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01615;old_locus_tag=LPH41_01615 NZ_CP087680.1 Protein Homology CDS 345378 345941 . - 0 ID=cds-WP_200866178.1;Parent=gene-LPH41_RS01615;Dbxref=Genbank:WP_200866178.1;Name=WP_200866178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=LPH41_RS01615;product=isochorismatase family protein;protein_id=WP_200866178.1;transl_table=11 NZ_CP087680.1 RefSeq gene 345961 346698 . - . ID=gene-LPH41_RS01620;Name=LPH41_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01620;old_locus_tag=LPH41_01620 NZ_CP087680.1 Protein Homology CDS 345961 346698 . - 0 ID=cds-WP_038270235.1;Parent=gene-LPH41_RS01620;Dbxref=Genbank:WP_038270235.1;Name=WP_038270235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403949.1;locus_tag=LPH41_RS01620;product=pirin family protein;protein_id=WP_038270235.1;transl_table=11 NZ_CP087680.1 RefSeq gene 346709 347782 . - . ID=gene-LPH41_RS01625;Name=LPH41_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01625;old_locus_tag=LPH41_01625 NZ_CP087680.1 Protein Homology CDS 346709 347782 . - 0 ID=cds-WP_038270238.1;Parent=gene-LPH41_RS01625;Dbxref=Genbank:WP_038270238.1;Name=WP_038270238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403948.1;locus_tag=LPH41_RS01625;product=alkene reductase;protein_id=WP_038270238.1;transl_table=11 NZ_CP087680.1 RefSeq gene 347845 348726 . - . ID=gene-LPH41_RS01630;Name=LPH41_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01630;old_locus_tag=LPH41_01630 NZ_CP087680.1 Protein Homology CDS 347845 348726 . - 0 ID=cds-WP_038270240.1;Parent=gene-LPH41_RS01630;Dbxref=Genbank:WP_038270240.1;Name=WP_038270240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403947.1;locus_tag=LPH41_RS01630;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038270240.1;transl_table=11 NZ_CP087680.1 RefSeq gene 348829 349704 . + . ID=gene-LPH41_RS01635;Name=LPH41_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01635;old_locus_tag=LPH41_01635 NZ_CP087680.1 Protein Homology CDS 348829 349704 . + 0 ID=cds-WP_038270243.1;Parent=gene-LPH41_RS01635;Dbxref=Genbank:WP_038270243.1;Name=WP_038270243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543218.1;locus_tag=LPH41_RS01635;product=LysR family transcriptional regulator;protein_id=WP_038270243.1;transl_table=11 NZ_CP087680.1 RefSeq gene 350263 351798 . + . ID=gene-LPH41_RS01640;Name=LPH41_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01640;old_locus_tag=LPH41_01640 NZ_CP087680.1 Protein Homology CDS 350263 351798 . + 0 ID=cds-WP_038270246.1;Parent=gene-LPH41_RS01640;Dbxref=Genbank:WP_038270246.1;Name=WP_038270246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303782.1;locus_tag=LPH41_RS01640;product=S53 family peptidase;protein_id=WP_038270246.1;transl_table=11 NZ_CP087680.1 RefSeq gene 352346 353272 . - . ID=gene-LPH41_RS01645;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LPH41_RS01645;old_locus_tag=LPH41_01645 NZ_CP087680.1 Protein Homology CDS 352346 353272 . - 0 ID=cds-WP_038270326.1;Parent=gene-LPH41_RS01645;Dbxref=Genbank:WP_038270326.1;Name=WP_038270326.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913558.1;locus_tag=LPH41_RS01645;product=Grx4 family monothiol glutaredoxin;protein_id=WP_038270326.1;transl_table=11 NZ_CP087680.1 RefSeq gene 353372 354115 . + . ID=gene-LPH41_RS01650;Name=LPH41_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01650;old_locus_tag=LPH41_01650 NZ_CP087680.1 Protein Homology CDS 353372 354115 . + 0 ID=cds-WP_230428280.1;Parent=gene-LPH41_RS01650;Dbxref=Genbank:WP_230428280.1;Name=WP_230428280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993124.1;locus_tag=LPH41_RS01650;product=polysaccharide deacetylase family protein;protein_id=WP_230428280.1;transl_table=11 NZ_CP087680.1 RefSeq gene 354736 356010 . - . ID=gene-LPH41_RS01655;Name=LPH41_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01655;old_locus_tag=LPH41_01655 NZ_CP087680.1 Protein Homology CDS 354736 356010 . - 0 ID=cds-WP_038270250.1;Parent=gene-LPH41_RS01655;Dbxref=Genbank:WP_038270250.1;Name=WP_038270250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851306.1;locus_tag=LPH41_RS01655;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_038270250.1;transl_table=11 NZ_CP087680.1 RefSeq gene 356399 358561 . + . ID=gene-LPH41_RS01660;Name=LPH41_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01660;old_locus_tag=LPH41_01660 NZ_CP087680.1 Protein Homology CDS 356399 358561 . + 0 ID=cds-WP_038270253.1;Parent=gene-LPH41_RS01660;Dbxref=Genbank:WP_038270253.1;Name=WP_038270253.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607380.1;locus_tag=LPH41_RS01660;product=type I secretion system permease/ATPase;protein_id=WP_038270253.1;transl_table=11 NZ_CP087680.1 RefSeq gene 358558 359979 . + . ID=gene-LPH41_RS01665;Name=LPH41_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01665;old_locus_tag=LPH41_01665 NZ_CP087680.1 Protein Homology CDS 358558 359979 . + 0 ID=cds-WP_038270256.1;Parent=gene-LPH41_RS01665;Dbxref=Genbank:WP_038270256.1;Name=WP_038270256.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920693.1;locus_tag=LPH41_RS01665;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_038270256.1;transl_table=11 NZ_CP087680.1 RefSeq gene 360097 360342 . + . ID=gene-LPH41_RS01670;Name=LPH41_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01670;old_locus_tag=LPH41_01670 NZ_CP087680.1 GeneMarkS-2+ CDS 360097 360342 . + 0 ID=cds-WP_152536569.1;Parent=gene-LPH41_RS01670;Dbxref=Genbank:WP_152536569.1;Name=WP_152536569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01670;product=hypothetical protein;protein_id=WP_152536569.1;transl_table=11 NZ_CP087680.1 RefSeq gene 360904 361413 . + . ID=gene-LPH41_RS01675;Name=LPH41_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01675;old_locus_tag=LPH41_01675 NZ_CP087680.1 Protein Homology CDS 360904 361413 . + 0 ID=cds-WP_038270259.1;Parent=gene-LPH41_RS01675;Dbxref=Genbank:WP_038270259.1;Name=WP_038270259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH41_RS01675;product=hypothetical protein;protein_id=WP_038270259.1;transl_table=11 NZ_CP087680.1 RefSeq gene 361560 362294 . + . ID=gene-LPH41_RS01680;Name=LPH41_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01680;old_locus_tag=LPH41_01680 NZ_CP087680.1 Protein Homology CDS 361560 362294 . + 0 ID=cds-WP_230428194.1;Parent=gene-LPH41_RS01680;Dbxref=Genbank:WP_230428194.1;Name=WP_230428194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH41_RS01680;product=hypothetical protein;protein_id=WP_230428194.1;transl_table=11 NZ_CP087680.1 RefSeq gene 362288 362566 . + . ID=gene-LPH41_RS01685;Name=LPH41_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01685;old_locus_tag=LPH41_01685 NZ_CP087680.1 Protein Homology CDS 362288 362566 . + 0 ID=cds-WP_051482245.1;Parent=gene-LPH41_RS01685;Dbxref=Genbank:WP_051482245.1;Name=WP_051482245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098106.1;locus_tag=LPH41_RS01685;product=hypothetical protein;protein_id=WP_051482245.1;transl_table=11 NZ_CP087680.1 RefSeq gene 362563 363186 . + . ID=gene-LPH41_RS01690;Name=LPH41_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01690;old_locus_tag=LPH41_01690 NZ_CP087680.1 Protein Homology CDS 362563 363186 . + 0 ID=cds-WP_038270262.1;Parent=gene-LPH41_RS01690;Dbxref=Genbank:WP_038270262.1;Name=WP_038270262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH41_RS01690;product=hypothetical protein;protein_id=WP_038270262.1;transl_table=11 NZ_CP087680.1 RefSeq gene 363183 363461 . + . ID=gene-LPH41_RS01695;Name=LPH41_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01695;old_locus_tag=LPH41_01695 NZ_CP087680.1 Protein Homology CDS 363183 363461 . + 0 ID=cds-WP_038270265.1;Parent=gene-LPH41_RS01695;Dbxref=Genbank:WP_038270265.1;Name=WP_038270265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894851.1;locus_tag=LPH41_RS01695;product=hypothetical protein;protein_id=WP_038270265.1;transl_table=11 NZ_CP087680.1 RefSeq gene 363458 364081 . + . ID=gene-LPH41_RS01700;Name=LPH41_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01700;old_locus_tag=LPH41_01700 NZ_CP087680.1 Protein Homology CDS 363458 364081 . + 0 ID=cds-WP_230439313.1;Parent=gene-LPH41_RS01700;Dbxref=Genbank:WP_230439313.1;Name=WP_230439313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098099.1;locus_tag=LPH41_RS01700;product=hypothetical protein;protein_id=WP_230439313.1;transl_table=11 NZ_CP087680.1 RefSeq gene 364078 364356 . + . ID=gene-LPH41_RS01705;Name=LPH41_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01705;old_locus_tag=LPH41_01705 NZ_CP087680.1 Protein Homology CDS 364078 364356 . + 0 ID=cds-WP_038270272.1;Parent=gene-LPH41_RS01705;Dbxref=Genbank:WP_038270272.1;Name=WP_038270272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894851.1;locus_tag=LPH41_RS01705;product=hypothetical protein;protein_id=WP_038270272.1;transl_table=11 NZ_CP087680.1 RefSeq gene 364353 364976 . + . ID=gene-LPH41_RS01710;Name=LPH41_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01710;old_locus_tag=LPH41_01710 NZ_CP087680.1 Protein Homology CDS 364353 364976 . + 0 ID=cds-WP_038270275.1;Parent=gene-LPH41_RS01710;Dbxref=Genbank:WP_038270275.1;Name=WP_038270275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH41_RS01710;product=hypothetical protein;protein_id=WP_038270275.1;transl_table=11 NZ_CP087680.1 RefSeq gene 364973 365251 . + . ID=gene-LPH41_RS01715;Name=LPH41_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01715;old_locus_tag=LPH41_01715 NZ_CP087680.1 Protein Homology CDS 364973 365251 . + 0 ID=cds-WP_038270278.1;Parent=gene-LPH41_RS01715;Dbxref=Genbank:WP_038270278.1;Name=WP_038270278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894851.1;locus_tag=LPH41_RS01715;product=hypothetical protein;protein_id=WP_038270278.1;transl_table=11 NZ_CP087680.1 RefSeq gene 365248 365871 . + . ID=gene-LPH41_RS01720;Name=LPH41_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01720;old_locus_tag=LPH41_01720 NZ_CP087680.1 Protein Homology CDS 365248 365871 . + 0 ID=cds-WP_038270281.1;Parent=gene-LPH41_RS01720;Dbxref=Genbank:WP_038270281.1;Name=WP_038270281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH41_RS01720;product=hypothetical protein;protein_id=WP_038270281.1;transl_table=11 NZ_CP087680.1 RefSeq gene 365871 373640 . + . ID=gene-LPH41_RS01725;Name=LPH41_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01725;old_locus_tag=LPH41_01725 NZ_CP087680.1 Protein Homology CDS 365871 373640 . + 0 ID=cds-WP_230439333.1;Parent=gene-LPH41_RS01725;Dbxref=Genbank:WP_230439333.1;Name=WP_230439333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894853.1;locus_tag=LPH41_RS01725;product=bacteriocin;protein_id=WP_230439333.1;transl_table=11 NZ_CP087680.1 RefSeq gene 374368 377895 . + . ID=gene-LPH41_RS01730;Name=LPH41_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01730;old_locus_tag=LPH41_01730 NZ_CP087680.1 Protein Homology CDS 374368 377895 . + 0 ID=cds-WP_038272843.1;Parent=gene-LPH41_RS01730;Dbxref=Genbank:WP_038272843.1;Name=WP_038272843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088084.1;locus_tag=LPH41_RS01730;product=AAA domain-containing protein;protein_id=WP_038272843.1;transl_table=11 NZ_CP087680.1 RefSeq gene 377943 378098 . + . ID=gene-LPH41_RS01735;Name=LPH41_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01735;old_locus_tag=LPH41_01735 NZ_CP087680.1 GeneMarkS-2+ CDS 377943 378098 . + 0 ID=cds-WP_160199298.1;Parent=gene-LPH41_RS01735;Dbxref=Genbank:WP_160199298.1;Name=WP_160199298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01735;product=hypothetical protein;protein_id=WP_160199298.1;transl_table=11 NZ_CP087680.1 RefSeq gene 378293 378466 . - . ID=gene-LPH41_RS01740;Name=LPH41_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01740;old_locus_tag=LPH41_01740 NZ_CP087680.1 GeneMarkS-2+ CDS 378293 378466 . - 0 ID=cds-WP_230428193.1;Parent=gene-LPH41_RS01740;Dbxref=Genbank:WP_230428193.1;Name=WP_230428193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01740;product=hypothetical protein;protein_id=WP_230428193.1;transl_table=11 NZ_CP087680.1 RefSeq gene 378518 378727 . + . ID=gene-LPH41_RS01745;Name=LPH41_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01745;old_locus_tag=LPH41_01745 NZ_CP087680.1 GeneMarkS-2+ CDS 378518 378727 . + 0 ID=cds-WP_230428192.1;Parent=gene-LPH41_RS01745;Dbxref=Genbank:WP_230428192.1;Name=WP_230428192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01745;product=hypothetical protein;protein_id=WP_230428192.1;transl_table=11 NZ_CP087680.1 RefSeq gene 378950 379129 . - . ID=gene-LPH41_RS01750;Name=LPH41_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01750;old_locus_tag=LPH41_01750 NZ_CP087680.1 GeneMarkS-2+ CDS 378950 379129 . - 0 ID=cds-WP_152536664.1;Parent=gene-LPH41_RS01750;Dbxref=Genbank:WP_152536664.1;Name=WP_152536664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01750;product=hypothetical protein;protein_id=WP_152536664.1;transl_table=11 NZ_CP087680.1 RefSeq gene 379217 379351 . - . ID=gene-LPH41_RS11945;Name=LPH41_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11945 NZ_CP087680.1 GeneMarkS-2+ CDS 379217 379351 . - 0 ID=cds-WP_267903176.1;Parent=gene-LPH41_RS11945;Dbxref=Genbank:WP_267903176.1;Name=WP_267903176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11945;product=hypothetical protein;protein_id=WP_267903176.1;transl_table=11 NZ_CP087680.1 RefSeq gene 379443 379856 . - . ID=gene-LPH41_RS01755;Name=LPH41_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01755;old_locus_tag=LPH41_01755 NZ_CP087680.1 Protein Homology CDS 379443 379856 . - 0 ID=cds-WP_051482383.1;Parent=gene-LPH41_RS01755;Dbxref=Genbank:WP_051482383.1;Name=WP_051482383.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016923.2;locus_tag=LPH41_RS01755;product=phage major capsid protein;protein_id=WP_051482383.1;transl_table=11 NZ_CP087680.1 RefSeq gene 379963 380121 . - . ID=gene-LPH41_RS01765;Name=LPH41_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01765;old_locus_tag=LPH41_01765 NZ_CP087680.1 GeneMarkS-2+ CDS 379963 380121 . - 0 ID=cds-WP_230428190.1;Parent=gene-LPH41_RS01765;Dbxref=Genbank:WP_230428190.1;Name=WP_230428190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01765;product=hypothetical protein;protein_id=WP_230428190.1;transl_table=11 NZ_CP087680.1 RefSeq gene 380526 380744 . - . ID=gene-LPH41_RS01770;Name=LPH41_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01770;old_locus_tag=LPH41_01770 NZ_CP087680.1 GeneMarkS-2+ CDS 380526 380744 . - 0 ID=cds-WP_230428189.1;Parent=gene-LPH41_RS01770;Dbxref=Genbank:WP_230428189.1;Name=WP_230428189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01770;product=hypothetical protein;protein_id=WP_230428189.1;transl_table=11 NZ_CP087680.1 RefSeq gene 380867 381085 . + . ID=gene-LPH41_RS01775;Name=LPH41_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01775;old_locus_tag=LPH41_01775 NZ_CP087680.1 GeneMarkS-2+ CDS 380867 381085 . + 0 ID=cds-WP_038272853.1;Parent=gene-LPH41_RS01775;Dbxref=Genbank:WP_038272853.1;Name=WP_038272853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01775;product=hypothetical protein;protein_id=WP_038272853.1;transl_table=11 NZ_CP087680.1 RefSeq gene 381315 381521 . - . ID=gene-LPH41_RS01780;Name=LPH41_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01780;old_locus_tag=LPH41_01780 NZ_CP087680.1 GeneMarkS-2+ CDS 381315 381521 . - 0 ID=cds-WP_152536665.1;Parent=gene-LPH41_RS01780;Dbxref=Genbank:WP_152536665.1;Name=WP_152536665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01780;product=hypothetical protein;protein_id=WP_152536665.1;transl_table=11 NZ_CP087680.1 RefSeq gene 381674 381979 . + . ID=gene-LPH41_RS01785;Name=LPH41_RS01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01785;old_locus_tag=LPH41_01785 NZ_CP087680.1 GeneMarkS-2+ CDS 381674 381979 . + 0 ID=cds-WP_038272854.1;Parent=gene-LPH41_RS01785;Dbxref=Genbank:WP_038272854.1;Name=WP_038272854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01785;product=hypothetical protein;protein_id=WP_038272854.1;transl_table=11 NZ_CP087680.1 RefSeq gene 382855 383172 . + . ID=gene-LPH41_RS01790;Name=LPH41_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01790;old_locus_tag=LPH41_01790 NZ_CP087680.1 Protein Homology CDS 382855 383172 . + 0 ID=cds-WP_038272858.1;Parent=gene-LPH41_RS01790;Dbxref=Genbank:WP_038272858.1;Name=WP_038272858.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LPH41_RS01790;product=helix-turn-helix transcriptional regulator;protein_id=WP_038272858.1;transl_table=11 NZ_CP087680.1 RefSeq gene 383126 384082 . + . ID=gene-LPH41_RS01795;Name=LPH41_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01795;old_locus_tag=LPH41_01795 NZ_CP087680.1 Protein Homology CDS 383126 384082 . + 0 ID=cds-WP_038272860.1;Parent=gene-LPH41_RS01795;Dbxref=Genbank:WP_038272860.1;Name=WP_038272860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LPH41_RS01795;product=reverse transcriptase family protein;protein_id=WP_038272860.1;transl_table=11 NZ_CP087680.1 RefSeq gene 384668 384743 . - . ID=gene-LPH41_RS01800;Name=LPH41_RS01800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS01800;old_locus_tag=LPH41_01800 NZ_CP087680.1 tRNAscan-SE tRNA 384668 384743 . - . ID=rna-LPH41_RS01800;Parent=gene-LPH41_RS01800;anticodon=(pos:complement(384708..384710));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS01800;product=tRNA-Thr NZ_CP087680.1 tRNAscan-SE exon 384668 384743 . - . ID=exon-LPH41_RS01800-1;Parent=rna-LPH41_RS01800;anticodon=(pos:complement(384708..384710));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS01800;product=tRNA-Thr NZ_CP087680.1 RefSeq gene 384945 385895 . - . ID=gene-LPH41_RS01805;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LPH41_RS01805;old_locus_tag=LPH41_01805 NZ_CP087680.1 Protein Homology CDS 384945 385895 . - 0 ID=cds-WP_038272862.1;Parent=gene-LPH41_RS01805;Dbxref=Genbank:WP_038272862.1;Name=WP_038272862.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258401.1;locus_tag=LPH41_RS01805;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_038272862.1;transl_table=11 NZ_CP087680.1 RefSeq gene 385954 386457 . - . ID=gene-LPH41_RS01810;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LPH41_RS01810;old_locus_tag=LPH41_01810 NZ_CP087680.1 Protein Homology CDS 385954 386457 . - 0 ID=cds-WP_038272868.1;Parent=gene-LPH41_RS01810;Dbxref=Genbank:WP_038272868.1;Name=WP_038272868.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304369.1;locus_tag=LPH41_RS01810;product=signal peptidase II;protein_id=WP_038272868.1;transl_table=11 NZ_CP087680.1 RefSeq gene 386776 389607 . - . ID=gene-LPH41_RS01815;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LPH41_RS01815;old_locus_tag=LPH41_01815 NZ_CP087680.1 Protein Homology CDS 386776 389607 . - 0 ID=cds-WP_038272864.1;Parent=gene-LPH41_RS01815;Dbxref=Genbank:WP_038272864.1;Name=WP_038272864.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928804.1;locus_tag=LPH41_RS01815;product=isoleucine--tRNA ligase;protein_id=WP_038272864.1;transl_table=11 NZ_CP087680.1 RefSeq gene 389604 390551 . - . ID=gene-LPH41_RS01820;Name=LPH41_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01820;old_locus_tag=LPH41_01820 NZ_CP087680.1 Protein Homology CDS 389604 390551 . - 0 ID=cds-WP_114867093.1;Parent=gene-LPH41_RS01820;Dbxref=Genbank:WP_114867093.1;Name=WP_114867093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085938.1;locus_tag=LPH41_RS01820;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_114867093.1;transl_table=11 NZ_CP087680.1 RefSeq gene 390707 392299 . - . ID=gene-LPH41_RS01825;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LPH41_RS01825;old_locus_tag=LPH41_01825 NZ_CP087680.1 Protein Homology CDS 390707 392299 . - 0 ID=cds-WP_114867213.1;Parent=gene-LPH41_RS01825;Dbxref=Genbank:WP_114867213.1;Name=WP_114867213.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158642.1;locus_tag=LPH41_RS01825;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_114867213.1;transl_table=11 NZ_CP087680.1 RefSeq gene 392413 392682 . + . ID=gene-LPH41_RS01830;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LPH41_RS01830;old_locus_tag=LPH41_01830 NZ_CP087680.1 Protein Homology CDS 392413 392682 . + 0 ID=cds-WP_038271456.1;Parent=gene-LPH41_RS01830;Dbxref=Genbank:WP_038271456.1;Name=WP_038271456.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184515.1;locus_tag=LPH41_RS01830;product=30S ribosomal protein S20;protein_id=WP_038271456.1;transl_table=11 NZ_CP087680.1 RefSeq gene 392796 393869 . - . ID=gene-LPH41_RS01835;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LPH41_RS01835;old_locus_tag=LPH41_01835 NZ_CP087680.1 Protein Homology CDS 392796 393869 . - 0 ID=cds-WP_038271438.1;Parent=gene-LPH41_RS01835;Dbxref=Genbank:WP_038271438.1;Name=WP_038271438.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017916359.1;locus_tag=LPH41_RS01835;product=GTPase ObgE;protein_id=WP_038271438.1;transl_table=11 NZ_CP087680.1 RefSeq gene 394038 394295 . - . ID=gene-LPH41_RS01840;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LPH41_RS01840;old_locus_tag=LPH41_01840 NZ_CP087680.1 Protein Homology CDS 394038 394295 . - 0 ID=cds-WP_038271437.1;Parent=gene-LPH41_RS01840;Dbxref=Genbank:WP_038271437.1;Name=WP_038271437.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085949.1;locus_tag=LPH41_RS01840;product=50S ribosomal protein L27;protein_id=WP_038271437.1;transl_table=11 NZ_CP087680.1 RefSeq gene 394320 394640 . - . ID=gene-LPH41_RS01845;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LPH41_RS01845;old_locus_tag=LPH41_01845 NZ_CP087680.1 Protein Homology CDS 394320 394640 . - 0 ID=cds-WP_038271436.1;Parent=gene-LPH41_RS01845;Dbxref=Genbank:WP_038271436.1;Name=WP_038271436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484328.1;locus_tag=LPH41_RS01845;product=50S ribosomal protein L21;protein_id=WP_038271436.1;transl_table=11 NZ_CP087680.1 RefSeq gene 394974 397883 . + . ID=gene-LPH41_RS01850;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LPH41_RS01850;old_locus_tag=LPH41_01850 NZ_CP087680.1 Protein Homology CDS 394974 397883 . + 0 ID=cds-WP_230428279.1;Parent=gene-LPH41_RS01850;Dbxref=Genbank:WP_230428279.1;Name=WP_230428279.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851525.1;locus_tag=LPH41_RS01850;product=excinuclease ABC subunit UvrA;protein_id=WP_230428279.1;transl_table=11 NZ_CP087680.1 RefSeq gene 398207 399124 . - . ID=gene-LPH41_RS01855;Name=LPH41_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01855;old_locus_tag=LPH41_01855 NZ_CP087680.1 Protein Homology CDS 398207 399124 . - 0 ID=cds-WP_230439314.1;Parent=gene-LPH41_RS01855;Dbxref=Genbank:WP_230439314.1;Name=WP_230439314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085954.1;locus_tag=LPH41_RS01855;product=hypothetical protein;protein_id=WP_230439314.1;transl_table=11 NZ_CP087680.1 RefSeq gene 399151 399501 . - . ID=gene-LPH41_RS01860;Name=LPH41_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01860;old_locus_tag=LPH41_01860 NZ_CP087680.1 GeneMarkS-2+ CDS 399151 399501 . - 0 ID=cds-WP_038271434.1;Parent=gene-LPH41_RS01860;Dbxref=Genbank:WP_038271434.1;Name=WP_038271434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01860;product=hypothetical protein;protein_id=WP_038271434.1;transl_table=11 NZ_CP087680.1 RefSeq gene 399498 399647 . - . ID=gene-LPH41_RS01865;Name=LPH41_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01865;old_locus_tag=LPH41_01865 NZ_CP087680.1 Protein Homology CDS 399498 399647 . - 0 ID=cds-WP_230428188.1;Parent=gene-LPH41_RS01865;Dbxref=Genbank:WP_230428188.1;Name=WP_230428188.1;Ontology_term=GO:0009307,GO:0000287,GO:0003677,GO:0009036;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF021112.2;locus_tag=LPH41_RS01865;product=XcyI family restriction endonuclease;protein_id=WP_230428188.1;transl_table=11 NZ_CP087680.1 RefSeq gene 399936 401867 . + . ID=gene-LPH41_RS01870;Name=LPH41_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01870;old_locus_tag=LPH41_01870 NZ_CP087680.1 Protein Homology CDS 399936 401867 . + 0 ID=cds-WP_038271433.1;Parent=gene-LPH41_RS01870;Dbxref=Genbank:WP_038271433.1;Name=WP_038271433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413104.1;locus_tag=LPH41_RS01870;product=P-loop NTPase fold protein;protein_id=WP_038271433.1;transl_table=11 NZ_CP087680.1 RefSeq gene 402017 402724 . + . ID=gene-LPH41_RS01875;Name=LPH41_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01875;old_locus_tag=LPH41_01875 NZ_CP087680.1 Protein Homology CDS 402017 402724 . + 0 ID=cds-WP_230428187.1;Parent=gene-LPH41_RS01875;Dbxref=Genbank:WP_230428187.1;Name=WP_230428187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413105.1;locus_tag=LPH41_RS01875;product=hypothetical protein;protein_id=WP_230428187.1;transl_table=11 NZ_CP087680.1 RefSeq gene 402721 404085 . + . ID=gene-LPH41_RS01880;Name=LPH41_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01880;old_locus_tag=LPH41_01880 NZ_CP087680.1 Protein Homology CDS 402721 404085 . + 0 ID=cds-WP_038271431.1;Parent=gene-LPH41_RS01880;Dbxref=Genbank:WP_038271431.1;Name=WP_038271431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413106.1;locus_tag=LPH41_RS01880;product=hypothetical protein;protein_id=WP_038271431.1;transl_table=11 NZ_CP087680.1 RefSeq gene 404099 404848 . + . ID=gene-LPH41_RS01885;Name=LPH41_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01885;old_locus_tag=LPH41_01885 NZ_CP087680.1 Protein Homology CDS 404099 404848 . + 0 ID=cds-WP_038271430.1;Parent=gene-LPH41_RS01885;Dbxref=Genbank:WP_038271430.1;Name=WP_038271430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016448858.1;locus_tag=LPH41_RS01885;product=TatD family hydrolase;protein_id=WP_038271430.1;transl_table=11 NZ_CP087680.1 RefSeq gene 404920 405120 . + . ID=gene-LPH41_RS01890;Name=LPH41_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01890;old_locus_tag=LPH41_01890 NZ_CP087680.1 GeneMarkS-2+ CDS 404920 405120 . + 0 ID=cds-WP_230428186.1;Parent=gene-LPH41_RS01890;Dbxref=Genbank:WP_230428186.1;Name=WP_230428186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01890;product=hypothetical protein;protein_id=WP_230428186.1;transl_table=11 NZ_CP087680.1 RefSeq gene 405190 406182 . + . ID=gene-LPH41_RS01895;Name=LPH41_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01895;old_locus_tag=LPH41_01895 NZ_CP087680.1 GeneMarkS-2+ CDS 405190 406182 . + 0 ID=cds-WP_230428185.1;Parent=gene-LPH41_RS01895;Dbxref=Genbank:WP_230428185.1;Name=WP_230428185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01895;product=hypothetical protein;protein_id=WP_230428185.1;transl_table=11 NZ_CP087680.1 RefSeq gene 406466 406714 . - . ID=gene-LPH41_RS01900;Name=LPH41_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01900;old_locus_tag=LPH41_01900 NZ_CP087680.1 GeneMarkS-2+ CDS 406466 406714 . - 0 ID=cds-WP_171898048.1;Parent=gene-LPH41_RS01900;Dbxref=Genbank:WP_171898048.1;Name=WP_171898048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01900;product=hypothetical protein;protein_id=WP_171898048.1;transl_table=11 NZ_CP087680.1 RefSeq gene 407051 407296 . - . ID=gene-LPH41_RS01905;Name=LPH41_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01905;old_locus_tag=LPH41_01905 NZ_CP087680.1 GeneMarkS-2+ CDS 407051 407296 . - 0 ID=cds-WP_171898047.1;Parent=gene-LPH41_RS01905;Dbxref=Genbank:WP_171898047.1;Name=WP_171898047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01905;product=hypothetical protein;protein_id=WP_171898047.1;transl_table=11 NZ_CP087680.1 RefSeq gene 407436 407711 . - . ID=gene-LPH41_RS01910;Name=LPH41_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01910;old_locus_tag=LPH41_01910 NZ_CP087680.1 GeneMarkS-2+ CDS 407436 407711 . - 0 ID=cds-WP_230428184.1;Parent=gene-LPH41_RS01910;Dbxref=Genbank:WP_230428184.1;Name=WP_230428184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS01910;product=hypothetical protein;protein_id=WP_230428184.1;transl_table=11 NZ_CP087680.1 RefSeq gene 408056 409624 . - . ID=gene-LPH41_RS01915;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LPH41_RS01915;old_locus_tag=LPH41_01915 NZ_CP087680.1 Protein Homology CDS 408056 409624 . - 0 ID=cds-WP_230439315.1;Parent=gene-LPH41_RS01915;Dbxref=Genbank:WP_230439315.1;Name=WP_230439315.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510808.1;locus_tag=LPH41_RS01915;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_230439315.1;transl_table=11 NZ_CP087680.1 RefSeq gene 409823 411280 . - . ID=gene-LPH41_RS01920;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LPH41_RS01920;old_locus_tag=LPH41_01920 NZ_CP087680.1 Protein Homology CDS 409823 411280 . - 0 ID=cds-WP_038271428.1;Parent=gene-LPH41_RS01920;Dbxref=Genbank:WP_038271428.1;Name=WP_038271428.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851520.1;locus_tag=LPH41_RS01920;product=IMP dehydrogenase;protein_id=WP_038271428.1;transl_table=11 NZ_CP087680.1 RefSeq gene 411397 412281 . - . ID=gene-LPH41_RS01925;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LPH41_RS01925;old_locus_tag=LPH41_01925 NZ_CP087680.1 Protein Homology CDS 411397 412281 . - 0 ID=cds-WP_114867092.1;Parent=gene-LPH41_RS01925;Dbxref=Genbank:WP_114867092.1;Name=WP_114867092.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451188.1;locus_tag=LPH41_RS01925;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_114867092.1;transl_table=11 NZ_CP087680.1 RefSeq gene 412495 413385 . - . ID=gene-LPH41_RS01930;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LPH41_RS01930;old_locus_tag=LPH41_01930 NZ_CP087680.1 Protein Homology CDS 412495 413385 . - 0 ID=cds-WP_038271426.1;Parent=gene-LPH41_RS01930;Dbxref=Genbank:WP_038271426.1;Name=WP_038271426.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894877.1;locus_tag=LPH41_RS01930;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_038271426.1;transl_table=11 NZ_CP087680.1 RefSeq gene 413385 415292 . - . ID=gene-LPH41_RS01935;Name=LPH41_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01935;old_locus_tag=LPH41_01935 NZ_CP087680.1 Protein Homology CDS 413385 415292 . - 0 ID=cds-WP_038271425.1;Parent=gene-LPH41_RS01935;Dbxref=Genbank:WP_038271425.1;Name=WP_038271425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300130.1;locus_tag=LPH41_RS01935;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_038271425.1;transl_table=11 NZ_CP087680.1 RefSeq gene 415305 416282 . - . ID=gene-LPH41_RS01940;Name=LPH41_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01940;old_locus_tag=LPH41_01940 NZ_CP087680.1 Protein Homology CDS 415305 416282 . - 0 ID=cds-WP_081755449.1;Parent=gene-LPH41_RS01940;Dbxref=Genbank:WP_081755449.1;Name=WP_081755449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851517.1;locus_tag=LPH41_RS01940;product=lipopolysaccharide biosynthesis protein;protein_id=WP_081755449.1;transl_table=11 NZ_CP087680.1 RefSeq gene 416282 417460 . - . ID=gene-LPH41_RS01945;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LPH41_RS01945;old_locus_tag=LPH41_01945 NZ_CP087680.1 Protein Homology CDS 416282 417460 . - 0 ID=cds-WP_038271424.1;Parent=gene-LPH41_RS01945;Dbxref=Genbank:WP_038271424.1;Name=WP_038271424.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468665.1;locus_tag=LPH41_RS01945;product=lipopolysaccharide assembly protein LapB;protein_id=WP_038271424.1;transl_table=11 NZ_CP087680.1 RefSeq gene 417465 417761 . - . ID=gene-LPH41_RS01950;Name=LPH41_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01950;old_locus_tag=LPH41_01950 NZ_CP087680.1 Protein Homology CDS 417465 417761 . - 0 ID=cds-WP_038271423.1;Parent=gene-LPH41_RS01950;Dbxref=Genbank:WP_038271423.1;Name=WP_038271423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088430.1;locus_tag=LPH41_RS01950;product=LapA family protein;protein_id=WP_038271423.1;transl_table=11 NZ_CP087680.1 RefSeq gene 417811 418125 . - . ID=gene-LPH41_RS01955;Name=LPH41_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01955;old_locus_tag=LPH41_01955 NZ_CP087680.1 Protein Homology CDS 417811 418125 . - 0 ID=cds-WP_038271422.1;Parent=gene-LPH41_RS01955;Dbxref=Genbank:WP_038271422.1;Name=WP_038271422.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088432.1;locus_tag=LPH41_RS01955;product=integration host factor subunit beta;protein_id=WP_038271422.1;transl_table=11 NZ_CP087680.1 RefSeq gene 418227 419903 . - . ID=gene-LPH41_RS01960;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LPH41_RS01960;old_locus_tag=LPH41_01960 NZ_CP087680.1 Protein Homology CDS 418227 419903 . - 0 ID=cds-WP_038271421.1;Parent=gene-LPH41_RS01960;Dbxref=Genbank:WP_038271421.1;Name=WP_038271421.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183099.1;locus_tag=LPH41_RS01960;product=30S ribosomal protein S1;protein_id=WP_038271421.1;transl_table=11 NZ_CP087680.1 RefSeq gene 420105 420776 . - . ID=gene-LPH41_RS01965;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LPH41_RS01965;old_locus_tag=LPH41_01965 NZ_CP087680.1 Protein Homology CDS 420105 420776 . - 0 ID=cds-WP_038271420.1;Parent=gene-LPH41_RS01965;Dbxref=Genbank:WP_038271420.1;Name=WP_038271420.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852197.1;locus_tag=LPH41_RS01965;product=(d)CMP kinase;protein_id=WP_038271420.1;transl_table=11 NZ_CP087680.1 RefSeq gene 421004 421129 . + . ID=gene-LPH41_RS01970;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LPH41_RS01970;old_locus_tag=LPH41_01970 NZ_CP087680.1 Protein Homology CDS 421004 421129 . + 0 ID=cds-WP_004085979.1;Parent=gene-LPH41_RS01970;Dbxref=Genbank:WP_004085979.1;Name=WP_004085979.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098120.1;locus_tag=LPH41_RS01970;product=type B 50S ribosomal protein L36;protein_id=WP_004085979.1;transl_table=11 NZ_CP087680.1 RefSeq gene 421302 421634 . + . ID=gene-LPH41_RS01975;Name=LPH41_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01975;old_locus_tag=LPH41_01975 NZ_CP087680.1 Protein Homology CDS 421302 421634 . + 0 ID=cds-WP_038271419.1;Parent=gene-LPH41_RS01975;Dbxref=Genbank:WP_038271419.1;Name=WP_038271419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894885.1;locus_tag=LPH41_RS01975;product=hypothetical protein;protein_id=WP_038271419.1;transl_table=11 NZ_CP087680.1 RefSeq gene 421682 422737 . + . ID=gene-LPH41_RS01980;Name=LPH41_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01980;old_locus_tag=LPH41_01980 NZ_CP087680.1 Protein Homology CDS 421682 422737 . + 0 ID=cds-WP_038271418.1;Parent=gene-LPH41_RS01980;Dbxref=Genbank:WP_038271418.1;Name=WP_038271418.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085983.1;locus_tag=LPH41_RS01980;product=agmatine deiminase family protein;protein_id=WP_038271418.1;transl_table=11 NZ_CP087680.1 RefSeq gene 422819 423706 . + . ID=gene-LPH41_RS01985;Name=LPH41_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01985;old_locus_tag=LPH41_01985 NZ_CP087680.1 Protein Homology CDS 422819 423706 . + 0 ID=cds-WP_038271417.1;Parent=gene-LPH41_RS01985;Dbxref=Genbank:WP_038271417.1;Name=WP_038271417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451810.1;locus_tag=LPH41_RS01985;product=carbon-nitrogen hydrolase;protein_id=WP_038271417.1;transl_table=11 NZ_CP087680.1 RefSeq gene 423834 425048 . + . ID=gene-LPH41_RS01990;Name=LPH41_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01990;old_locus_tag=LPH41_01990 NZ_CP087680.1 Protein Homology CDS 423834 425048 . + 0 ID=cds-WP_171898074.1;Parent=gene-LPH41_RS01990;Dbxref=Genbank:WP_171898074.1;Name=WP_171898074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894888.1;locus_tag=LPH41_RS01990;product=TraB/GumN family protein;protein_id=WP_171898074.1;transl_table=11 NZ_CP087680.1 RefSeq gene 425373 428537 . - . ID=gene-LPH41_RS01995;Name=LPH41_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS01995;old_locus_tag=LPH41_01995 NZ_CP087680.1 Protein Homology CDS 425373 428537 . - 0 ID=cds-WP_038271415.1;Parent=gene-LPH41_RS01995;Dbxref=Genbank:WP_038271415.1;Name=WP_038271415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852202.1;locus_tag=LPH41_RS01995;product=discoidin domain-containing protein;protein_id=WP_038271415.1;transl_table=11 NZ_CP087680.1 RefSeq gene 428543 429379 . - . ID=gene-LPH41_RS02000;Name=LPH41_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02000;old_locus_tag=LPH41_02000 NZ_CP087680.1 Protein Homology CDS 428543 429379 . - 0 ID=cds-WP_038271414.1;Parent=gene-LPH41_RS02000;Dbxref=Genbank:WP_038271414.1;Name=WP_038271414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357393.1;locus_tag=LPH41_RS02000;product=carbohydrate ABC transporter permease;protein_id=WP_038271414.1;transl_table=11 NZ_CP087680.1 RefSeq gene 429376 430257 . - . ID=gene-LPH41_RS02005;Name=LPH41_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02005;old_locus_tag=LPH41_02005 NZ_CP087680.1 Protein Homology CDS 429376 430257 . - 0 ID=cds-WP_038271413.1;Parent=gene-LPH41_RS02005;Dbxref=Genbank:WP_038271413.1;Name=WP_038271413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489669.1;locus_tag=LPH41_RS02005;product=sugar ABC transporter permease;protein_id=WP_038271413.1;transl_table=11 NZ_CP087680.1 RefSeq gene 430254 431501 . - . ID=gene-LPH41_RS02010;Name=LPH41_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02010;old_locus_tag=LPH41_02010 NZ_CP087680.1 Protein Homology CDS 430254 431501 . - 0 ID=cds-WP_051482335.1;Parent=gene-LPH41_RS02010;Dbxref=Genbank:WP_051482335.1;Name=WP_051482335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852884.1;locus_tag=LPH41_RS02010;product=sugar ABC transporter substrate-binding protein;protein_id=WP_051482335.1;transl_table=11 NZ_CP087680.1 RefSeq gene 431550 433151 . - . ID=gene-LPH41_RS02015;Name=LPH41_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02015;old_locus_tag=LPH41_02015 NZ_CP087680.1 Protein Homology CDS 431550 433151 . - 0 ID=cds-WP_038271453.1;Parent=gene-LPH41_RS02015;Dbxref=Genbank:WP_038271453.1;Name=WP_038271453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894893.1;locus_tag=LPH41_RS02015;product=hypothetical protein;protein_id=WP_038271453.1;transl_table=11 NZ_CP087680.1 RefSeq gene 433544 433735 . - . ID=gene-LPH41_RS02020;Name=LPH41_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02020;old_locus_tag=LPH41_02020 NZ_CP087680.1 GeneMarkS-2+ CDS 433544 433735 . - 0 ID=cds-WP_152536626.1;Parent=gene-LPH41_RS02020;Dbxref=Genbank:WP_152536626.1;Name=WP_152536626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02020;product=hypothetical protein;protein_id=WP_152536626.1;transl_table=11 NZ_CP087680.1 RefSeq gene 433716 433988 . - . ID=gene-LPH41_RS02025;Name=LPH41_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02025;old_locus_tag=LPH41_02025 NZ_CP087680.1 Protein Homology CDS 433716 433988 . - 0 ID=cds-WP_038271449.1;Parent=gene-LPH41_RS02025;Dbxref=Genbank:WP_038271449.1;Name=WP_038271449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904540.1;locus_tag=LPH41_RS02025;product=BolA family transcriptional regulator;protein_id=WP_038271449.1;transl_table=11 NZ_CP087680.1 RefSeq gene 433985 434272 . - . ID=gene-LPH41_RS02030;Name=LPH41_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02030;old_locus_tag=LPH41_02030 NZ_CP087680.1 GeneMarkS-2+ CDS 433985 434272 . - 0 ID=cds-WP_051482334.1;Parent=gene-LPH41_RS02030;Dbxref=Genbank:WP_051482334.1;Name=WP_051482334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02030;product=hypothetical protein;protein_id=WP_051482334.1;transl_table=11 NZ_CP087680.1 RefSeq gene 434632 435543 . + . ID=gene-LPH41_RS02035;Name=LPH41_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02035;old_locus_tag=LPH41_02035 NZ_CP087680.1 Protein Homology CDS 434632 435543 . + 0 ID=cds-WP_038271411.1;Parent=gene-LPH41_RS02035;Dbxref=Genbank:WP_038271411.1;Name=WP_038271411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086003.1;locus_tag=LPH41_RS02035;product=ScpA family protein;protein_id=WP_038271411.1;transl_table=11 NZ_CP087680.1 RefSeq gene 435557 436534 . + . ID=gene-LPH41_RS02040;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LPH41_RS02040;old_locus_tag=LPH41_02040 NZ_CP087680.1 Protein Homology CDS 435557 436534 . + 0 ID=cds-WP_038271447.1;Parent=gene-LPH41_RS02040;Dbxref=Genbank:WP_038271447.1;Name=WP_038271447.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037358.1;locus_tag=LPH41_RS02040;product=SMC-Scp complex subunit ScpB;protein_id=WP_038271447.1;transl_table=11 NZ_CP087680.1 RefSeq gene 436531 437949 . + . ID=gene-LPH41_RS02045;Name=LPH41_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02045;old_locus_tag=LPH41_02045 NZ_CP087680.1 Protein Homology CDS 436531 437949 . + 0 ID=cds-WP_038271410.1;Parent=gene-LPH41_RS02045;Dbxref=Genbank:WP_038271410.1;Name=WP_038271410.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088470.1;locus_tag=LPH41_RS02045;product=pseudouridine synthase;protein_id=WP_038271410.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 438397 438834 . - . ID=gene-LPH41_RS02050;Name=LPH41_RS02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02050;old_locus_tag=LPH41_02050;partial=true;pseudo=true;start_range=.,438397 NZ_CP087680.1 Protein Homology CDS 438397 438834 . - 0 ID=cds-LPH41_RS02050;Parent=gene-LPH41_RS02050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474141.1;locus_tag=LPH41_RS02050;partial=true;product=hypothetical protein;pseudo=true;start_range=.,438397;transl_table=11 NZ_CP087680.1 RefSeq gene 438924 439739 . - . ID=gene-LPH41_RS02055;Name=LPH41_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02055;old_locus_tag=LPH41_02055 NZ_CP087680.1 Protein Homology CDS 438924 439739 . - 0 ID=cds-WP_038271409.1;Parent=gene-LPH41_RS02055;Dbxref=Genbank:WP_038271409.1;Name=WP_038271409.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088475.1;locus_tag=LPH41_RS02055;product=amidohydrolase;protein_id=WP_038271409.1;transl_table=11 NZ_CP087680.1 RefSeq gene 439753 440901 . - . ID=gene-LPH41_RS02060;Name=LPH41_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02060;old_locus_tag=LPH41_02060 NZ_CP087680.1 Protein Homology CDS 439753 440901 . - 0 ID=cds-WP_038271408.1;Parent=gene-LPH41_RS02060;Dbxref=Genbank:WP_038271408.1;Name=WP_038271408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964632.1;locus_tag=LPH41_RS02060;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_038271408.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 441070 441689 . + . ID=gene-LPH41_RS02065;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=pseudogene;locus_tag=LPH41_RS02065;old_locus_tag=LPH41_02065;pseudo=true NZ_CP087680.1 Protein Homology CDS 441070 441689 . + 0 ID=cds-LPH41_RS02065;Parent=gene-LPH41_RS02065;Note=frameshifted;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088477.1;locus_tag=LPH41_RS02065;product=heme ABC exporter ATP-binding protein CcmA;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 441806 442404 . + . ID=gene-LPH41_RS02070;Name=LPH41_RS02070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02070;old_locus_tag=LPH41_02070;pseudo=true NZ_CP087680.1 Protein Homology CDS 441806 442404 . + 0 ID=cds-LPH41_RS02070;Parent=gene-LPH41_RS02070;Note=frameshifted%3B internal stop;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003473242.1;locus_tag=LPH41_RS02070;product=heme exporter protein CcmB;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 442646 442780 . + . ID=gene-LPH41_RS11950;Name=LPH41_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11950 NZ_CP087680.1 GeneMarkS-2+ CDS 442646 442780 . + 0 ID=cds-WP_267903175.1;Parent=gene-LPH41_RS11950;Dbxref=Genbank:WP_267903175.1;Name=WP_267903175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11950;product=hypothetical protein;protein_id=WP_267903175.1;transl_table=11 NZ_CP087680.1 RefSeq gene 442780 442956 . + . ID=gene-LPH41_RS02075;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=LPH41_RS02075;old_locus_tag=LPH41_02075 NZ_CP087680.1 Protein Homology CDS 442780 442956 . + 0 ID=cds-WP_069636214.1;Parent=gene-LPH41_RS02075;Dbxref=Genbank:WP_069636214.1;Name=WP_069636214.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382686.1;locus_tag=LPH41_RS02075;product=heme exporter protein CcmD;protein_id=WP_069636214.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 443009 443394 . + . ID=gene-LPH41_RS02080;Name=LPH41_RS02080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02080;old_locus_tag=LPH41_02080;pseudo=true NZ_CP087680.1 Protein Homology CDS 443009 443394 . + 0 ID=cds-LPH41_RS02080;Parent=gene-LPH41_RS02080;Note=frameshifted%3B internal stop;Ontology_term=GO:0017003,GO:0017004,GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=protein-heme linkage|0017003||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851508.1;locus_tag=LPH41_RS02080;product=cytochrome c maturation protein CcmE;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 443520 445236 . + . ID=gene-LPH41_RS02085;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=pseudogene;locus_tag=LPH41_RS02085;old_locus_tag=LPH41_02085;pseudo=true NZ_CP087680.1 Protein Homology CDS 443520 445236 . + 0 ID=cds-LPH41_RS02085;Parent=gene-LPH41_RS02085;Note=frameshifted%3B internal stop;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088485.1;locus_tag=LPH41_RS02085;product=cytochrome c biogenesis protein CcsA;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 445229 445828 . + . ID=gene-LPH41_RS02090;Name=LPH41_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02090;old_locus_tag=LPH41_02090 NZ_CP087680.1 Protein Homology CDS 445229 445828 . + 0 ID=cds-WP_038271407.1;Parent=gene-LPH41_RS02090;Dbxref=Genbank:WP_038271407.1;Name=WP_038271407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086014.1;locus_tag=LPH41_RS02090;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_038271407.1;transl_table=11 NZ_CP087680.1 RefSeq gene 446468 447580 . + . ID=gene-LPH41_RS02095;Name=LPH41_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02095;old_locus_tag=LPH41_02095 NZ_CP087680.1 Protein Homology CDS 446468 447580 . + 0 ID=cds-WP_038271406.1;Parent=gene-LPH41_RS02095;Dbxref=Genbank:WP_038271406.1;Name=WP_038271406.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088494.1;locus_tag=LPH41_RS02095;product=homoserine O-acetyltransferase;protein_id=WP_038271406.1;transl_table=11 NZ_CP087680.1 RefSeq gene 448073 448762 . - . ID=gene-LPH41_RS02100;Name=LPH41_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02100;old_locus_tag=LPH41_02100 NZ_CP087680.1 Protein Homology CDS 448073 448762 . - 0 ID=cds-WP_038271405.1;Parent=gene-LPH41_RS02100;Dbxref=Genbank:WP_038271405.1;Name=WP_038271405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156122.1;locus_tag=LPH41_RS02100;product=phytoene synthase;protein_id=WP_038271405.1;transl_table=11 NZ_CP087680.1 RefSeq gene 448787 449476 . - . ID=gene-LPH41_RS02105;Name=LPH41_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02105;old_locus_tag=LPH41_02105 NZ_CP087680.1 Protein Homology CDS 448787 449476 . - 0 ID=cds-WP_038271404.1;Parent=gene-LPH41_RS02105;Dbxref=Genbank:WP_038271404.1;Name=WP_038271404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894913.1;locus_tag=LPH41_RS02105;product=phosphoglycolate phosphatase;protein_id=WP_038271404.1;transl_table=11 NZ_CP087680.1 RefSeq gene 449466 450203 . - . ID=gene-LPH41_RS02110;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LPH41_RS02110;old_locus_tag=LPH41_02110 NZ_CP087680.1 Protein Homology CDS 449466 450203 . - 0 ID=cds-WP_038271403.1;Parent=gene-LPH41_RS02110;Dbxref=Genbank:WP_038271403.1;Name=WP_038271403.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851498.1;locus_tag=LPH41_RS02110;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_038271403.1;transl_table=11 NZ_CP087680.1 RefSeq gene 450234 451577 . - . ID=gene-LPH41_RS02115;Name=LPH41_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02115;old_locus_tag=LPH41_02115 NZ_CP087680.1 Protein Homology CDS 450234 451577 . - 0 ID=cds-WP_038271402.1;Parent=gene-LPH41_RS02115;Dbxref=Genbank:WP_038271402.1;Name=WP_038271402.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159956.1;locus_tag=LPH41_RS02115;product=TRZ/ATZ family hydrolase;protein_id=WP_038271402.1;transl_table=11 NZ_CP087680.1 RefSeq gene 451715 452281 . - . ID=gene-LPH41_RS02120;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LPH41_RS02120;old_locus_tag=LPH41_02120 NZ_CP087680.1 Protein Homology CDS 451715 452281 . - 0 ID=cds-WP_038271401.1;Parent=gene-LPH41_RS02120;Dbxref=Genbank:WP_038271401.1;Name=WP_038271401.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301003.1;locus_tag=LPH41_RS02120;product=elongation factor P;protein_id=WP_038271401.1;transl_table=11 NZ_CP087680.1 RefSeq gene 452384 453412 . + . ID=gene-LPH41_RS02125;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LPH41_RS02125;old_locus_tag=LPH41_02125 NZ_CP087680.1 Protein Homology CDS 452384 453412 . + 0 ID=cds-WP_038271400.1;Parent=gene-LPH41_RS02125;Dbxref=Genbank:WP_038271400.1;Name=WP_038271400.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408738.1;locus_tag=LPH41_RS02125;product=EF-P beta-lysylation protein EpmB;protein_id=WP_038271400.1;transl_table=11 NZ_CP087680.1 RefSeq gene 453662 454420 . - . ID=gene-LPH41_RS02130;Name=LPH41_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02130;old_locus_tag=LPH41_02130 NZ_CP087680.1 Protein Homology CDS 453662 454420 . - 0 ID=cds-WP_038271443.1;Parent=gene-LPH41_RS02130;Dbxref=Genbank:WP_038271443.1;Name=WP_038271443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088504.1;locus_tag=LPH41_RS02130;product=RNA methyltransferase;protein_id=WP_038271443.1;transl_table=11 NZ_CP087680.1 RefSeq gene 454540 455367 . + . ID=gene-LPH41_RS02135;Name=LPH41_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02135;old_locus_tag=LPH41_02135 NZ_CP087680.1 Protein Homology CDS 454540 455367 . + 0 ID=cds-WP_038271399.1;Parent=gene-LPH41_RS02135;Dbxref=Genbank:WP_038271399.1;Name=WP_038271399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088505.1;locus_tag=LPH41_RS02135;product=inositol monophosphatase family protein;protein_id=WP_038271399.1;transl_table=11 NZ_CP087680.1 RefSeq gene 457076 457753 . + . ID=gene-LPH41_RS02140;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LPH41_RS02140;old_locus_tag=LPH41_02140 NZ_CP087680.1 Protein Homology CDS 457076 457753 . + 0 ID=cds-WP_038271397.1;Parent=gene-LPH41_RS02140;Dbxref=Genbank:WP_038271397.1;Name=WP_038271397.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851492.1;locus_tag=LPH41_RS02140;product=dethiobiotin synthase;protein_id=WP_038271397.1;transl_table=11 NZ_CP087680.1 RefSeq gene 459033 459107 . - . ID=gene-LPH41_RS02145;Name=LPH41_RS02145;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS02145;old_locus_tag=LPH41_02145 NZ_CP087680.1 tRNAscan-SE tRNA 459033 459107 . - . ID=rna-LPH41_RS02145;Parent=gene-LPH41_RS02145;anticodon=(pos:complement(459073..459075));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS02145;product=tRNA-Val NZ_CP087680.1 tRNAscan-SE exon 459033 459107 . - . ID=exon-LPH41_RS02145-1;Parent=rna-LPH41_RS02145;anticodon=(pos:complement(459073..459075));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS02145;product=tRNA-Val NZ_CP087680.1 RefSeq gene 459169 459522 . - . ID=gene-LPH41_RS02150;Name=LPH41_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02150;old_locus_tag=LPH41_02150 NZ_CP087680.1 Protein Homology CDS 459169 459522 . - 0 ID=cds-WP_038271396.1;Parent=gene-LPH41_RS02150;Dbxref=Genbank:WP_038271396.1;Name=WP_038271396.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155784.1;locus_tag=LPH41_RS02150;product=PilZ domain-containing protein;protein_id=WP_038271396.1;transl_table=11 NZ_CP087680.1 RefSeq gene 459519 460481 . - . ID=gene-LPH41_RS02155;Name=LPH41_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02155;old_locus_tag=LPH41_02155 NZ_CP087680.1 Protein Homology CDS 459519 460481 . - 0 ID=cds-WP_038271395.1;Parent=gene-LPH41_RS02155;Dbxref=Genbank:WP_038271395.1;Name=WP_038271395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893200.1;locus_tag=LPH41_RS02155;product=DNA polymerase III subunit delta';protein_id=WP_038271395.1;transl_table=11 NZ_CP087680.1 RefSeq gene 460510 461556 . - . ID=gene-LPH41_RS02160;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LPH41_RS02160;old_locus_tag=LPH41_02160 NZ_CP087680.1 Protein Homology CDS 460510 461556 . - 0 ID=cds-WP_038271442.1;Parent=gene-LPH41_RS02160;Dbxref=Genbank:WP_038271442.1;Name=WP_038271442.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338004.1;locus_tag=LPH41_RS02160;product=endolytic transglycosylase MltG;protein_id=WP_038271442.1;transl_table=11 NZ_CP087680.1 RefSeq gene 461670 463028 . - . ID=gene-LPH41_RS02165;Name=LPH41_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02165;old_locus_tag=LPH41_02165 NZ_CP087680.1 Protein Homology CDS 461670 463028 . - 0 ID=cds-WP_038271394.1;Parent=gene-LPH41_RS02165;Dbxref=Genbank:WP_038271394.1;Name=WP_038271394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083470.1;locus_tag=LPH41_RS02165;product=aminodeoxychorismate synthase component I;protein_id=WP_038271394.1;transl_table=11 NZ_CP087680.1 RefSeq gene 463244 464479 . - . ID=gene-LPH41_RS02170;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LPH41_RS02170;old_locus_tag=LPH41_02170 NZ_CP087680.1 Protein Homology CDS 463244 464479 . - 0 ID=cds-WP_038271393.1;Parent=gene-LPH41_RS02170;Dbxref=Genbank:WP_038271393.1;Name=WP_038271393.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302031.1;locus_tag=LPH41_RS02170;product=beta-ketoacyl-ACP synthase II;protein_id=WP_038271393.1;transl_table=11 NZ_CP087680.1 RefSeq gene 464639 464878 . - . ID=gene-LPH41_RS02175;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LPH41_RS02175;old_locus_tag=LPH41_02175 NZ_CP087680.1 Protein Homology CDS 464639 464878 . - 0 ID=cds-WP_004083472.1;Parent=gene-LPH41_RS02175;Dbxref=Genbank:WP_004083472.1;Name=WP_004083472.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083472.1;locus_tag=LPH41_RS02175;product=acyl carrier protein;protein_id=WP_004083472.1;transl_table=11 NZ_CP087680.1 RefSeq gene 465045 465788 . - . ID=gene-LPH41_RS02180;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LPH41_RS02180;old_locus_tag=LPH41_02180 NZ_CP087680.1 Protein Homology CDS 465045 465788 . - 0 ID=cds-WP_038271392.1;Parent=gene-LPH41_RS02180;Dbxref=Genbank:WP_038271392.1;Name=WP_038271392.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814323.1;locus_tag=LPH41_RS02180;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_038271392.1;transl_table=11 NZ_CP087680.1 RefSeq gene 465885 466829 . - . ID=gene-LPH41_RS02185;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LPH41_RS02185;old_locus_tag=LPH41_02185 NZ_CP087680.1 Protein Homology CDS 465885 466829 . - 0 ID=cds-WP_038271441.1;Parent=gene-LPH41_RS02185;Dbxref=Genbank:WP_038271441.1;Name=WP_038271441.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607396.1;locus_tag=LPH41_RS02185;product=ACP S-malonyltransferase;protein_id=WP_038271441.1;transl_table=11 NZ_CP087680.1 RefSeq gene 470245 472935 . + . ID=gene-LPH41_RS02190;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LPH41_RS02190;old_locus_tag=LPH41_02190 NZ_CP087680.1 Protein Homology CDS 470245 472935 . + 0 ID=cds-WP_038271391.1;Parent=gene-LPH41_RS02190;Dbxref=Genbank:WP_038271391.1;Name=WP_038271391.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660853.1;locus_tag=LPH41_RS02190;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_038271391.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 473092 473996 . - . ID=gene-LPH41_RS02195;Name=LPH41_RS02195;end_range=473996,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02195;old_locus_tag=LPH41_02195;partial=true;pseudo=true;start_range=.,473092 NZ_CP087680.1 Protein Homology CDS 473092 473996 . - 0 ID=cds-LPH41_RS02195;Parent=gene-LPH41_RS02195;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=473996,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083476.1;locus_tag=LPH41_RS02195;partial=true;product=calcium-binding protein;pseudo=true;start_range=.,473092;transl_table=11 NZ_CP087680.1 RefSeq gene 474016 474540 . - . ID=gene-LPH41_RS02200;Name=LPH41_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02200;old_locus_tag=LPH41_02200 NZ_CP087680.1 GeneMarkS-2+ CDS 474016 474540 . - 0 ID=cds-WP_152536625.1;Parent=gene-LPH41_RS02200;Dbxref=Genbank:WP_152536625.1;Name=WP_152536625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02200;product=hypothetical protein;protein_id=WP_152536625.1;transl_table=11 NZ_CP087680.1 RefSeq gene 474615 474803 . - . ID=gene-LPH41_RS02205;Name=LPH41_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02205;old_locus_tag=LPH41_02205 NZ_CP087680.1 Protein Homology CDS 474615 474803 . - 0 ID=cds-WP_051482330.1;Parent=gene-LPH41_RS02205;Dbxref=Genbank:WP_051482330.1;Name=WP_051482330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018180.2;locus_tag=LPH41_RS02205;product=epoxide hydrolase N-terminal domain-containing protein;protein_id=WP_051482330.1;transl_table=11 NZ_CP087680.1 RefSeq gene 475077 475385 . + . ID=gene-LPH41_RS02210;Name=LPH41_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02210;old_locus_tag=LPH41_02210 NZ_CP087680.1 GeneMarkS-2+ CDS 475077 475385 . + 0 ID=cds-WP_160165184.1;Parent=gene-LPH41_RS02210;Dbxref=Genbank:WP_160165184.1;Name=WP_160165184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02210;product=hypothetical protein;protein_id=WP_160165184.1;transl_table=11 NZ_CP087680.1 RefSeq gene 475622 476101 . + . ID=gene-LPH41_RS02215;Name=LPH41_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02215;old_locus_tag=LPH41_02215 NZ_CP087680.1 Protein Homology CDS 475622 476101 . + 0 ID=cds-WP_038271387.1;Parent=gene-LPH41_RS02215;Dbxref=Genbank:WP_038271387.1;Name=WP_038271387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024212.2;locus_tag=LPH41_RS02215;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_038271387.1;transl_table=11 NZ_CP087680.1 RefSeq gene 476487 476825 . + . ID=gene-LPH41_RS02220;Name=LPH41_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02220;old_locus_tag=LPH41_02220 NZ_CP087680.1 GeneMarkS-2+ CDS 476487 476825 . + 0 ID=cds-WP_160199299.1;Parent=gene-LPH41_RS02220;Dbxref=Genbank:WP_160199299.1;Name=WP_160199299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02220;product=hypothetical protein;protein_id=WP_160199299.1;transl_table=11 NZ_CP087680.1 RefSeq gene 476890 477036 . + . ID=gene-LPH41_RS02225;Name=LPH41_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02225;old_locus_tag=LPH41_02225 NZ_CP087680.1 GeneMarkS-2+ CDS 476890 477036 . + 0 ID=cds-WP_160165183.1;Parent=gene-LPH41_RS02225;Dbxref=Genbank:WP_160165183.1;Name=WP_160165183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02225;product=hypothetical protein;protein_id=WP_160165183.1;transl_table=11 NZ_CP087680.1 RefSeq gene 477105 477932 . + . ID=gene-LPH41_RS02230;Name=LPH41_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02230;old_locus_tag=LPH41_02230 NZ_CP087680.1 GeneMarkS-2+ CDS 477105 477932 . + 0 ID=cds-WP_152536623.1;Parent=gene-LPH41_RS02230;Dbxref=Genbank:WP_152536623.1;Name=WP_152536623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02230;product=hypothetical protein;protein_id=WP_152536623.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 477991 478439 . + . ID=gene-LPH41_RS02235;Name=LPH41_RS02235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02235;old_locus_tag=LPH41_02235;partial=true;pseudo=true;start_range=.,477991 NZ_CP087680.1 Protein Homology CDS 477991 478439 . + 0 ID=cds-LPH41_RS02235;Parent=gene-LPH41_RS02235;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1;locus_tag=LPH41_RS02235;partial=true;product=recombinase family protein;pseudo=true;start_range=.,477991;transl_table=11 NZ_CP087680.1 RefSeq gene 478520 478711 . + . ID=gene-LPH41_RS02240;Name=LPH41_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02240;old_locus_tag=LPH41_02240 NZ_CP087680.1 GeneMarkS-2+ CDS 478520 478711 . + 0 ID=cds-WP_114867089.1;Parent=gene-LPH41_RS02240;Dbxref=Genbank:WP_114867089.1;Name=WP_114867089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02240;product=hypothetical protein;protein_id=WP_114867089.1;transl_table=11 NZ_CP087680.1 RefSeq gene 478708 479550 . + . ID=gene-LPH41_RS02245;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LPH41_RS02245;old_locus_tag=LPH41_02245 NZ_CP087680.1 Protein Homology CDS 478708 479550 . + 0 ID=cds-WP_114867088.1;Parent=gene-LPH41_RS02245;Dbxref=Genbank:WP_114867088.1;Name=WP_114867088.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097716.1;locus_tag=LPH41_RS02245;product=archaetidylserine decarboxylase;protein_id=WP_114867088.1;transl_table=11 NZ_CP087680.1 RefSeq gene 481206 481628 . + . ID=gene-LPH41_RS02250;Name=LPH41_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02250;old_locus_tag=LPH41_02250 NZ_CP087680.1 Protein Homology CDS 481206 481628 . + 0 ID=cds-WP_038272666.1;Parent=gene-LPH41_RS02250;Dbxref=Genbank:WP_038272666.1;Name=WP_038272666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018974490.1;locus_tag=LPH41_RS02250;product=cupin domain-containing protein;protein_id=WP_038272666.1;transl_table=11 NZ_CP087680.1 RefSeq gene 482956 484899 . + . ID=gene-LPH41_RS02255;Name=LPH41_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02255;old_locus_tag=LPH41_02255 NZ_CP087680.1 Protein Homology CDS 482956 484899 . + 0 ID=cds-WP_230439316.1;Parent=gene-LPH41_RS02255;Dbxref=Genbank:WP_230439316.1;Name=WP_230439316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090648.1;locus_tag=LPH41_RS02255;product=lytic transglycosylase domain-containing protein;protein_id=WP_230439316.1;transl_table=11 NZ_CP087680.1 RefSeq gene 484983 486233 . + . ID=gene-LPH41_RS02260;Name=LPH41_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02260;old_locus_tag=LPH41_02260 NZ_CP087680.1 Protein Homology CDS 484983 486233 . + 0 ID=cds-WP_038272671.1;Parent=gene-LPH41_RS02260;Dbxref=Genbank:WP_038272671.1;Name=WP_038272671.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851980.1;locus_tag=LPH41_RS02260;product=multifunctional CCA addition/repair protein;protein_id=WP_038272671.1;transl_table=11 NZ_CP087680.1 RefSeq gene 486741 487580 . - . ID=gene-LPH41_RS02265;Name=LPH41_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02265;old_locus_tag=LPH41_02265 NZ_CP087680.1 Protein Homology CDS 486741 487580 . - 0 ID=cds-WP_051482375.1;Parent=gene-LPH41_RS02265;Dbxref=Genbank:WP_051482375.1;Name=WP_051482375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851979.1;locus_tag=LPH41_RS02265;product=N-acyl homoserine lactonase family protein;protein_id=WP_051482375.1;transl_table=11 NZ_CP087680.1 RefSeq gene 488520 489419 . - . ID=gene-LPH41_RS02270;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LPH41_RS02270;old_locus_tag=LPH41_02270 NZ_CP087680.1 Protein Homology CDS 488520 489419 . - 0 ID=cds-WP_038272675.1;Parent=gene-LPH41_RS02270;Dbxref=Genbank:WP_038272675.1;Name=WP_038272675.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851978.1;locus_tag=LPH41_RS02270;product=heme o synthase;protein_id=WP_038272675.1;transl_table=11 NZ_CP087680.1 RefSeq gene 489422 490585 . - . ID=gene-LPH41_RS02275;Name=LPH41_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02275;old_locus_tag=LPH41_02275 NZ_CP087680.1 Protein Homology CDS 489422 490585 . - 0 ID=cds-WP_038272676.1;Parent=gene-LPH41_RS02275;Dbxref=Genbank:WP_038272676.1;Name=WP_038272676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238044.1;locus_tag=LPH41_RS02275;product=heme A synthase;protein_id=WP_038272676.1;transl_table=11 NZ_CP087680.1 RefSeq gene 491465 492670 . + . ID=gene-LPH41_RS02280;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LPH41_RS02280;old_locus_tag=LPH41_02280 NZ_CP087680.1 Protein Homology CDS 491465 492670 . + 0 ID=cds-WP_038272681.1;Parent=gene-LPH41_RS02280;Dbxref=Genbank:WP_038272681.1;Name=WP_038272681.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090644.1;locus_tag=LPH41_RS02280;product=8-amino-7-oxononanoate synthase;protein_id=WP_038272681.1;transl_table=11 NZ_CP087680.1 RefSeq gene 492826 493593 . + . ID=gene-LPH41_RS02285;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=LPH41_RS02285;old_locus_tag=LPH41_02285 NZ_CP087680.1 Protein Homology CDS 492826 493593 . + 0 ID=cds-WP_038272683.1;Parent=gene-LPH41_RS02285;Dbxref=Genbank:WP_038272683.1;Name=WP_038272683.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1;locus_tag=LPH41_RS02285;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_038272683.1;transl_table=11 NZ_CP087680.1 RefSeq gene 494294 495859 . - . ID=gene-LPH41_RS02290;Name=LPH41_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02290;old_locus_tag=LPH41_02290 NZ_CP087680.1 Protein Homology CDS 494294 495859 . - 0 ID=cds-WP_051482376.1;Parent=gene-LPH41_RS02290;Dbxref=Genbank:WP_051482376.1;Name=WP_051482376.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510532.1;locus_tag=LPH41_RS02290;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_051482376.1;transl_table=11 NZ_CP087680.1 RefSeq gene 495869 497047 . - . ID=gene-LPH41_RS02295;Name=LPH41_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02295;old_locus_tag=LPH41_02295 NZ_CP087680.1 Protein Homology CDS 495869 497047 . - 0 ID=cds-WP_038272696.1;Parent=gene-LPH41_RS02295;Dbxref=Genbank:WP_038272696.1;Name=WP_038272696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005408768.1;locus_tag=LPH41_RS02295;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038272696.1;transl_table=11 NZ_CP087680.1 RefSeq gene 497058 498548 . - . ID=gene-LPH41_RS02300;Name=LPH41_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02300;old_locus_tag=LPH41_02300 NZ_CP087680.1 Protein Homology CDS 497058 498548 . - 0 ID=cds-WP_038272685.1;Parent=gene-LPH41_RS02300;Dbxref=Genbank:WP_038272685.1;Name=WP_038272685.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810731.1;locus_tag=LPH41_RS02300;product=efflux transporter outer membrane subunit;protein_id=WP_038272685.1;transl_table=11 NZ_CP087680.1 RefSeq gene 498545 498976 . - . ID=gene-LPH41_RS02305;Name=LPH41_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02305;old_locus_tag=LPH41_02305 NZ_CP087680.1 Protein Homology CDS 498545 498976 . - 0 ID=cds-WP_038272687.1;Parent=gene-LPH41_RS02305;Dbxref=Genbank:WP_038272687.1;Name=WP_038272687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893858.1;locus_tag=LPH41_RS02305;product=MarR family transcriptional regulator;protein_id=WP_038272687.1;transl_table=11 NZ_CP087680.1 RefSeq gene 499374 501623 . + . ID=gene-LPH41_RS02310;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LPH41_RS02310;old_locus_tag=LPH41_02310 NZ_CP087680.1 Protein Homology CDS 499374 501623 . + 0 ID=cds-WP_038272689.1;Parent=gene-LPH41_RS02310;Dbxref=Genbank:WP_038272689.1;Name=WP_038272689.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483492.1;locus_tag=LPH41_RS02310;product=DNA topoisomerase IV subunit A;protein_id=WP_038272689.1;transl_table=11 NZ_CP087680.1 RefSeq gene 503622 503813 . - . ID=gene-LPH41_RS02315;Name=LPH41_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02315;old_locus_tag=LPH41_02315 NZ_CP087680.1 GeneMarkS-2+ CDS 503622 503813 . - 0 ID=cds-WP_038270700.1;Parent=gene-LPH41_RS02315;Dbxref=Genbank:WP_038270700.1;Name=WP_038270700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02315;product=hypothetical protein;protein_id=WP_038270700.1;transl_table=11 NZ_CP087680.1 RefSeq gene 504423 506288 . - . ID=gene-LPH41_RS02320;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LPH41_RS02320;old_locus_tag=LPH41_02320 NZ_CP087680.1 Protein Homology CDS 504423 506288 . - 0 ID=cds-WP_038270699.1;Parent=gene-LPH41_RS02320;Dbxref=Genbank:WP_038270699.1;Name=WP_038270699.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157069.1;locus_tag=LPH41_RS02320;product=RNA polymerase sigma factor RpoD;protein_id=WP_038270699.1;transl_table=11 NZ_CP087680.1 RefSeq gene 506686 507612 . + . ID=gene-LPH41_RS02325;Name=LPH41_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02325;old_locus_tag=LPH41_02325 NZ_CP087680.1 Protein Homology CDS 506686 507612 . + 0 ID=cds-WP_038270698.1;Parent=gene-LPH41_RS02325;Dbxref=Genbank:WP_038270698.1;Name=WP_038270698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484402.1;locus_tag=LPH41_RS02325;product=lauroyl acyltransferase;protein_id=WP_038270698.1;transl_table=11 NZ_CP087680.1 RefSeq gene 508266 508838 . - . ID=gene-LPH41_RS02330;Name=LPH41_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02330;old_locus_tag=LPH41_02330 NZ_CP087680.1 GeneMarkS-2+ CDS 508266 508838 . - 0 ID=cds-WP_051482276.1;Parent=gene-LPH41_RS02330;Dbxref=Genbank:WP_051482276.1;Name=WP_051482276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02330;product=hypothetical protein;protein_id=WP_051482276.1;transl_table=11 NZ_CP087680.1 RefSeq gene 508848 509192 . - . ID=gene-LPH41_RS02335;Name=LPH41_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02335;old_locus_tag=LPH41_02335 NZ_CP087680.1 Protein Homology CDS 508848 509192 . - 0 ID=cds-WP_038270697.1;Parent=gene-LPH41_RS02335;Dbxref=Genbank:WP_038270697.1;Name=WP_038270697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024096.2;locus_tag=LPH41_RS02335;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_038270697.1;transl_table=11 NZ_CP087680.1 RefSeq gene 509196 509576 . - . ID=gene-LPH41_RS02340;Name=LPH41_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02340;old_locus_tag=LPH41_02340 NZ_CP087680.1 GeneMarkS-2+ CDS 509196 509576 . - 0 ID=cds-WP_038270696.1;Parent=gene-LPH41_RS02340;Dbxref=Genbank:WP_038270696.1;Name=WP_038270696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02340;product=hypothetical protein;protein_id=WP_038270696.1;transl_table=11 NZ_CP087680.1 RefSeq gene 509754 510581 . - . ID=gene-LPH41_RS02345;Name=LPH41_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02345;old_locus_tag=LPH41_02345 NZ_CP087680.1 Protein Homology CDS 509754 510581 . - 0 ID=cds-WP_038270695.1;Parent=gene-LPH41_RS02345;Dbxref=Genbank:WP_038270695.1;Name=WP_038270695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852217.1;locus_tag=LPH41_RS02345;product=DUF2303 family protein;protein_id=WP_038270695.1;transl_table=11 NZ_CP087680.1 RefSeq gene 510585 510917 . - . ID=gene-LPH41_RS02350;Name=LPH41_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02350;old_locus_tag=LPH41_02350 NZ_CP087680.1 Protein Homology CDS 510585 510917 . - 0 ID=cds-WP_038270693.1;Parent=gene-LPH41_RS02350;Dbxref=Genbank:WP_038270693.1;Name=WP_038270693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852216.1;locus_tag=LPH41_RS02350;product=hypothetical protein;protein_id=WP_038270693.1;transl_table=11 NZ_CP087680.1 RefSeq gene 511519 511869 . + . ID=gene-LPH41_RS02355;Name=LPH41_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02355;old_locus_tag=LPH41_02355 NZ_CP087680.1 GeneMarkS-2+ CDS 511519 511869 . + 0 ID=cds-WP_230428181.1;Parent=gene-LPH41_RS02355;Dbxref=Genbank:WP_230428181.1;Name=WP_230428181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02355;product=hypothetical protein;protein_id=WP_230428181.1;transl_table=11 NZ_CP087680.1 RefSeq gene 511980 512171 . - . ID=gene-LPH41_RS02360;Name=LPH41_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02360;old_locus_tag=LPH41_02360 NZ_CP087680.1 GeneMarkS-2+ CDS 511980 512171 . - 0 ID=cds-WP_051482275.1;Parent=gene-LPH41_RS02360;Dbxref=Genbank:WP_051482275.1;Name=WP_051482275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02360;product=hypothetical protein;protein_id=WP_051482275.1;transl_table=11 NZ_CP087680.1 RefSeq gene 512249 512554 . - . ID=gene-LPH41_RS02365;Name=LPH41_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02365;old_locus_tag=LPH41_02365 NZ_CP087680.1 GeneMarkS-2+ CDS 512249 512554 . - 0 ID=cds-WP_051482274.1;Parent=gene-LPH41_RS02365;Dbxref=Genbank:WP_051482274.1;Name=WP_051482274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02365;product=hypothetical protein;protein_id=WP_051482274.1;transl_table=11 NZ_CP087680.1 RefSeq gene 512992 513198 . + . ID=gene-LPH41_RS02370;Name=LPH41_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02370;old_locus_tag=LPH41_02370 NZ_CP087680.1 Protein Homology CDS 512992 513198 . + 0 ID=cds-WP_038270689.1;Parent=gene-LPH41_RS02370;Dbxref=Genbank:WP_038270689.1;Name=WP_038270689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.2;locus_tag=LPH41_RS02370;product=phage terminase large subunit family protein;protein_id=WP_038270689.1;transl_table=11 NZ_CP087680.1 RefSeq gene 513182 513823 . + . ID=gene-LPH41_RS02375;Name=LPH41_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02375;old_locus_tag=LPH41_02375 NZ_CP087680.1 Protein Homology CDS 513182 513823 . + 0 ID=cds-WP_038270687.1;Parent=gene-LPH41_RS02375;Dbxref=Genbank:WP_038270687.1;Name=WP_038270687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.2;locus_tag=LPH41_RS02375;product=phage terminase large subunit family protein;protein_id=WP_038270687.1;transl_table=11 NZ_CP087680.1 RefSeq gene 513842 514291 . + . ID=gene-LPH41_RS02380;Name=LPH41_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02380;old_locus_tag=LPH41_02380 NZ_CP087680.1 GeneMarkS-2+ CDS 513842 514291 . + 0 ID=cds-WP_230428180.1;Parent=gene-LPH41_RS02380;Dbxref=Genbank:WP_230428180.1;Name=WP_230428180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02380;product=hypothetical protein;protein_id=WP_230428180.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 514390 515774 . + . ID=gene-LPH41_RS02385;Name=LPH41_RS02385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02385;old_locus_tag=LPH41_02385;pseudo=true NZ_CP087680.1 Protein Homology CDS 514390 515774 . + 0 ID=cds-LPH41_RS02385;Parent=gene-LPH41_RS02385;Note=frameshifted%3B internal stop;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097617.1;locus_tag=LPH41_RS02385;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 515813 516061 . + . ID=gene-LPH41_RS02390;Name=LPH41_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02390;old_locus_tag=LPH41_02390 NZ_CP087680.1 GeneMarkS-2+ CDS 515813 516061 . + 0 ID=cds-WP_038270686.1;Parent=gene-LPH41_RS02390;Dbxref=Genbank:WP_038270686.1;Name=WP_038270686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02390;product=hypothetical protein;protein_id=WP_038270686.1;transl_table=11 NZ_CP087680.1 RefSeq gene 516188 516418 . + . ID=gene-LPH41_RS02395;Name=LPH41_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02395;old_locus_tag=LPH41_02395 NZ_CP087680.1 GeneMarkS-2+ CDS 516188 516418 . + 0 ID=cds-WP_230428500.1;Parent=gene-LPH41_RS02395;Dbxref=Genbank:WP_230428500.1;Name=WP_230428500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02395;product=hypothetical protein;protein_id=WP_230428500.1;transl_table=11 NZ_CP087680.1 RefSeq gene 516399 516692 . + . ID=gene-LPH41_RS02400;Name=LPH41_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02400;old_locus_tag=LPH41_02400 NZ_CP087680.1 GeneMarkS-2+ CDS 516399 516692 . + 0 ID=cds-WP_038270685.1;Parent=gene-LPH41_RS02400;Dbxref=Genbank:WP_038270685.1;Name=WP_038270685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02400;product=hypothetical protein;protein_id=WP_038270685.1;transl_table=11 NZ_CP087680.1 RefSeq gene 516782 517231 . + . ID=gene-LPH41_RS02405;Name=LPH41_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02405;old_locus_tag=LPH41_02405 NZ_CP087680.1 Protein Homology CDS 516782 517231 . + 0 ID=cds-WP_230428179.1;Parent=gene-LPH41_RS02405;Dbxref=Genbank:WP_230428179.1;Name=WP_230428179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852727.1;locus_tag=LPH41_RS02405;product=hypothetical protein;protein_id=WP_230428179.1;transl_table=11 NZ_CP087680.1 RefSeq gene 517207 517860 . + . ID=gene-LPH41_RS02410;Name=LPH41_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02410;old_locus_tag=LPH41_02410 NZ_CP087680.1 GeneMarkS-2+ CDS 517207 517860 . + 0 ID=cds-WP_230428178.1;Parent=gene-LPH41_RS02410;Dbxref=Genbank:WP_230428178.1;Name=WP_230428178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02410;product=hypothetical protein;protein_id=WP_230428178.1;transl_table=11 NZ_CP087680.1 RefSeq gene 517860 518069 . + . ID=gene-LPH41_RS11955;Name=LPH41_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11955 NZ_CP087680.1 Protein Homology CDS 517860 518069 . + 0 ID=cds-WP_230428177.1;Parent=gene-LPH41_RS11955;Dbxref=Genbank:WP_230428177.1;Name=WP_230428177.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=LPH41_RS11955;product=phage baseplate assembly protein V;protein_id=WP_230428177.1;transl_table=11 NZ_CP087680.1 RefSeq gene 518038 518319 . + . ID=gene-LPH41_RS11960;Name=LPH41_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11960 NZ_CP087680.1 Protein Homology CDS 518038 518319 . + 0 ID=cds-WP_268980389.1;Parent=gene-LPH41_RS11960;Dbxref=Genbank:WP_268980389.1;Name=WP_268980389.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=LPH41_RS11960;product=phage baseplate assembly protein V;protein_id=WP_268980389.1;transl_table=11 NZ_CP087680.1 RefSeq gene 518329 518628 . - . ID=gene-LPH41_RS02420;Name=LPH41_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02420;old_locus_tag=LPH41_02420 NZ_CP087680.1 Protein Homology CDS 518329 518628 . - 0 ID=cds-WP_081755408.1;Parent=gene-LPH41_RS02420;Dbxref=Genbank:WP_081755408.1;Name=WP_081755408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850959.1;locus_tag=LPH41_RS02420;product=HigA family addiction module antitoxin;protein_id=WP_081755408.1;transl_table=11 NZ_CP087680.1 RefSeq gene 518632 518910 . - . ID=gene-LPH41_RS02425;Name=LPH41_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02425;old_locus_tag=LPH41_02425 NZ_CP087680.1 Protein Homology CDS 518632 518910 . - 0 ID=cds-WP_038270683.1;Parent=gene-LPH41_RS02425;Dbxref=Genbank:WP_038270683.1;Name=WP_038270683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=LPH41_RS02425;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038270683.1;transl_table=11 NZ_CP087680.1 RefSeq gene 519011 519340 . + . ID=gene-LPH41_RS02430;Name=LPH41_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02430;old_locus_tag=LPH41_02430 NZ_CP087680.1 Protein Homology CDS 519011 519340 . + 0 ID=cds-WP_230428175.1;Parent=gene-LPH41_RS02430;Dbxref=Genbank:WP_230428175.1;Name=WP_230428175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088650.1;locus_tag=LPH41_RS02430;product=GPW/gp25 family protein;protein_id=WP_230428175.1;transl_table=11 NZ_CP087680.1 RefSeq gene 519340 520233 . + . ID=gene-LPH41_RS02435;Name=LPH41_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02435;old_locus_tag=LPH41_02435 NZ_CP087680.1 Protein Homology CDS 519340 520233 . + 0 ID=cds-WP_038270682.1;Parent=gene-LPH41_RS02435;Dbxref=Genbank:WP_038270682.1;Name=WP_038270682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893248.1;locus_tag=LPH41_RS02435;product=baseplate J/gp47 family protein;protein_id=WP_038270682.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 520304 520708 . + . ID=gene-LPH41_RS02440;Name=LPH41_RS02440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02440;old_locus_tag=LPH41_02440;pseudo=true NZ_CP087680.1 Protein Homology CDS 520304 520708 . + 0 ID=cds-LPH41_RS02440;Parent=gene-LPH41_RS02440;Note=internal stop;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01634.1;locus_tag=LPH41_RS02440;product=phage tail protein I;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 520781 521035 . + . ID=gene-LPH41_RS02445;Name=LPH41_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02445;old_locus_tag=LPH41_02445 NZ_CP087680.1 Protein Homology CDS 520781 521035 . + 0 ID=cds-WP_230428278.1;Parent=gene-LPH41_RS02445;Dbxref=Genbank:WP_230428278.1;Name=WP_230428278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018674.2;locus_tag=LPH41_RS02445;product=phage tail protein;protein_id=WP_230428278.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 521032 521112 . + . ID=gene-LPH41_RS02450;Name=LPH41_RS02450;end_range=521112,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS02450;old_locus_tag=LPH41_02450;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 521032 521112 . + 0 ID=cds-LPH41_RS02450;Parent=gene-LPH41_RS02450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=521112,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017316.2;locus_tag=LPH41_RS02450;partial=true;product=tail protein X;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 521300 521896 . + . ID=gene-LPH41_RS02455;Name=LPH41_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02455;old_locus_tag=LPH41_02455 NZ_CP087680.1 Protein Homology CDS 521300 521896 . + 0 ID=cds-WP_162814073.1;Parent=gene-LPH41_RS02455;Dbxref=Genbank:WP_162814073.1;Name=WP_162814073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.2;locus_tag=LPH41_RS02455;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_162814073.1;transl_table=11 NZ_CP087680.1 RefSeq gene 522583 523629 . - . ID=gene-LPH41_RS02460;Name=LPH41_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02460;old_locus_tag=LPH41_02460 NZ_CP087680.1 Protein Homology CDS 522583 523629 . - 0 ID=cds-WP_038270717.1;Parent=gene-LPH41_RS02460;Dbxref=Genbank:WP_038270717.1;Name=WP_038270717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156238.1;locus_tag=LPH41_RS02460;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_038270717.1;transl_table=11 NZ_CP087680.1 RefSeq gene 523643 524587 . - . ID=gene-LPH41_RS02465;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LPH41_RS02465;old_locus_tag=LPH41_02465 NZ_CP087680.1 Protein Homology CDS 523643 524587 . - 0 ID=cds-WP_051482278.1;Parent=gene-LPH41_RS02465;Dbxref=Genbank:WP_051482278.1;Name=WP_051482278.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506838.1;locus_tag=LPH41_RS02465;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_051482278.1;transl_table=11 NZ_CP087680.1 RefSeq gene 524599 525459 . - . ID=gene-LPH41_RS02470;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LPH41_RS02470;old_locus_tag=LPH41_02470 NZ_CP087680.1 Protein Homology CDS 524599 525459 . - 0 ID=cds-WP_038270680.1;Parent=gene-LPH41_RS02470;Dbxref=Genbank:WP_038270680.1;Name=WP_038270680.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090632.1;locus_tag=LPH41_RS02470;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_038270680.1;transl_table=11 NZ_CP087680.1 RefSeq gene 525463 526566 . - . ID=gene-LPH41_RS02475;Name=LPH41_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02475;old_locus_tag=LPH41_02475 NZ_CP087680.1 Protein Homology CDS 525463 526566 . - 0 ID=cds-WP_038270679.1;Parent=gene-LPH41_RS02475;Dbxref=Genbank:WP_038270679.1;Name=WP_038270679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089499.1;locus_tag=LPH41_RS02475;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_038270679.1;transl_table=11 NZ_CP087680.1 RefSeq gene 526903 527148 . - . ID=gene-LPH41_RS02480;Name=LPH41_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02480;old_locus_tag=LPH41_02480 NZ_CP087680.1 Protein Homology CDS 526903 527148 . - 0 ID=cds-WP_230428174.1;Parent=gene-LPH41_RS02480;Dbxref=Genbank:WP_230428174.1;Name=WP_230428174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893847.1;locus_tag=LPH41_RS02480;product=hypothetical protein;protein_id=WP_230428174.1;transl_table=11 NZ_CP087680.1 RefSeq gene 527350 527508 . - . ID=gene-LPH41_RS02485;Name=LPH41_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02485;old_locus_tag=LPH41_02485 NZ_CP087680.1 GeneMarkS-2+ CDS 527350 527508 . - 0 ID=cds-WP_160165146.1;Parent=gene-LPH41_RS02485;Dbxref=Genbank:WP_160165146.1;Name=WP_160165146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02485;product=hypothetical protein;protein_id=WP_160165146.1;transl_table=11 NZ_CP087680.1 RefSeq gene 528877 529611 . - . ID=gene-LPH41_RS02490;Name=LPH41_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02490;old_locus_tag=LPH41_02490 NZ_CP087680.1 Protein Homology CDS 528877 529611 . - 0 ID=cds-WP_038270676.1;Parent=gene-LPH41_RS02490;Dbxref=Genbank:WP_038270676.1;Name=WP_038270676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090628.1;locus_tag=LPH41_RS02490;product=copper homeostasis protein CutC;protein_id=WP_038270676.1;transl_table=11 NZ_CP087680.1 RefSeq gene 529732 529905 . - . ID=gene-LPH41_RS02495;Name=LPH41_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02495;old_locus_tag=LPH41_02495 NZ_CP087680.1 GeneMarkS-2+ CDS 529732 529905 . - 0 ID=cds-WP_160165144.1;Parent=gene-LPH41_RS02495;Dbxref=Genbank:WP_160165144.1;Name=WP_160165144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02495;product=hypothetical protein;protein_id=WP_160165144.1;transl_table=11 NZ_CP087680.1 RefSeq gene 530733 532475 . + . ID=gene-LPH41_RS02500;Name=LPH41_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02500;old_locus_tag=LPH41_02500 NZ_CP087680.1 Protein Homology CDS 530733 532475 . + 0 ID=cds-WP_230439334.1;Parent=gene-LPH41_RS02500;Dbxref=Genbank:WP_230439334.1;Name=WP_230439334.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017915896.1;locus_tag=LPH41_RS02500;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_230439334.1;transl_table=11 NZ_CP087680.1 RefSeq gene 532979 533176 . - . ID=gene-LPH41_RS02505;Name=LPH41_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02505;old_locus_tag=LPH41_02505 NZ_CP087680.1 Protein Homology CDS 532979 533176 . - 0 ID=cds-WP_162814088.1;Parent=gene-LPH41_RS02505;Dbxref=Genbank:WP_162814088.1;Name=WP_162814088.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH41_RS02505;product=Tn3 family transposase;protein_id=WP_162814088.1;transl_table=11 NZ_CP087680.1 RefSeq gene 533362 533961 . - . ID=gene-LPH41_RS02510;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LPH41_RS02510;old_locus_tag=LPH41_02510 NZ_CP087680.1 Protein Homology CDS 533362 533961 . - 0 ID=cds-WP_038270670.1;Parent=gene-LPH41_RS02510;Dbxref=Genbank:WP_038270670.1;Name=WP_038270670.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381128.1;locus_tag=LPH41_RS02510;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_038270670.1;transl_table=11 NZ_CP087680.1 RefSeq gene 534238 534780 . + . ID=gene-LPH41_RS02515;Name=LPH41_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02515;old_locus_tag=LPH41_02515 NZ_CP087680.1 Protein Homology CDS 534238 534780 . + 0 ID=cds-WP_038270669.1;Parent=gene-LPH41_RS02515;Dbxref=Genbank:WP_038270669.1;Name=WP_038270669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917545.1;locus_tag=LPH41_RS02515;product=shikimate kinase;protein_id=WP_038270669.1;transl_table=11 NZ_CP087680.1 RefSeq gene 534777 535889 . + . ID=gene-LPH41_RS02520;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LPH41_RS02520;old_locus_tag=LPH41_02520 NZ_CP087680.1 Protein Homology CDS 534777 535889 . + 0 ID=cds-WP_038270668.1;Parent=gene-LPH41_RS02520;Dbxref=Genbank:WP_038270668.1;Name=WP_038270668.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851784.1;locus_tag=LPH41_RS02520;product=3-dehydroquinate synthase;protein_id=WP_038270668.1;transl_table=11 NZ_CP087680.1 RefSeq gene 536305 537369 . + . ID=gene-LPH41_RS02525;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LPH41_RS02525;old_locus_tag=LPH41_02525 NZ_CP087680.1 Protein Homology CDS 536305 537369 . + 0 ID=cds-WP_038270667.1;Parent=gene-LPH41_RS02525;Dbxref=Genbank:WP_038270667.1;Name=WP_038270667.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407863.1;locus_tag=LPH41_RS02525;product=uroporphyrinogen decarboxylase;protein_id=WP_038270667.1;transl_table=11 NZ_CP087680.1 RefSeq gene 537654 538031 . - . ID=gene-LPH41_RS02530;Name=LPH41_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02530;old_locus_tag=LPH41_02530 NZ_CP087680.1 GeneMarkS-2+ CDS 537654 538031 . - 0 ID=cds-WP_152536588.1;Parent=gene-LPH41_RS02530;Dbxref=Genbank:WP_152536588.1;Name=WP_152536588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02530;product=hypothetical protein;protein_id=WP_152536588.1;transl_table=11 NZ_CP087680.1 RefSeq gene 538657 542229 . - . ID=gene-LPH41_RS02535;Name=LPH41_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02535;old_locus_tag=LPH41_02535 NZ_CP087680.1 Protein Homology CDS 538657 542229 . - 0 ID=cds-WP_230439317.1;Parent=gene-LPH41_RS02535;Dbxref=Genbank:WP_230439317.1;Name=WP_230439317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851779.1;locus_tag=LPH41_RS02535;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_230439317.1;transl_table=11 NZ_CP087680.1 RefSeq gene 542322 543026 . + . ID=gene-LPH41_RS02540;Name=LPH41_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02540;old_locus_tag=LPH41_02540 NZ_CP087680.1 Protein Homology CDS 542322 543026 . + 0 ID=cds-WP_069636203.1;Parent=gene-LPH41_RS02540;Dbxref=Genbank:WP_069636203.1;Name=WP_069636203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893834.1;locus_tag=LPH41_RS02540;product=YceI family protein;protein_id=WP_069636203.1;transl_table=11 NZ_CP087680.1 RefSeq gene 543038 543604 . + . ID=gene-LPH41_RS02545;Name=LPH41_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02545;old_locus_tag=LPH41_02545 NZ_CP087680.1 Protein Homology CDS 543038 543604 . + 0 ID=cds-WP_038270663.1;Parent=gene-LPH41_RS02545;Dbxref=Genbank:WP_038270663.1;Name=WP_038270663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893833.1;locus_tag=LPH41_RS02545;product=cytochrome b;protein_id=WP_038270663.1;transl_table=11 NZ_CP087680.1 RefSeq gene 543615 544181 . + . ID=gene-LPH41_RS02550;Name=LPH41_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02550;old_locus_tag=LPH41_02550 NZ_CP087680.1 Protein Homology CDS 543615 544181 . + 0 ID=cds-WP_038270662.1;Parent=gene-LPH41_RS02550;Dbxref=Genbank:WP_038270662.1;Name=WP_038270662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893832.1;locus_tag=LPH41_RS02550;product=YceI family protein;protein_id=WP_038270662.1;transl_table=11 NZ_CP087680.1 RefSeq gene 544582 545253 . - . ID=gene-LPH41_RS02555;Name=LPH41_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02555;old_locus_tag=LPH41_02555 NZ_CP087680.1 Protein Homology CDS 544582 545253 . - 0 ID=cds-WP_038270661.1;Parent=gene-LPH41_RS02555;Dbxref=Genbank:WP_038270661.1;Name=WP_038270661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989995.1;locus_tag=LPH41_RS02555;product=DNA-3-methyladenine glycosylase;protein_id=WP_038270661.1;transl_table=11 NZ_CP087680.1 RefSeq gene 545558 546730 . - . ID=gene-LPH41_RS02560;Name=LPH41_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02560;old_locus_tag=LPH41_02560 NZ_CP087680.1 Protein Homology CDS 545558 546730 . - 0 ID=cds-WP_038270660.1;Parent=gene-LPH41_RS02560;Dbxref=Genbank:WP_038270660.1;Name=WP_038270660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851774.1;locus_tag=LPH41_RS02560;product=SRPBCC family protein;protein_id=WP_038270660.1;transl_table=11 NZ_CP087680.1 RefSeq gene 547427 547576 . + . ID=gene-LPH41_RS02565;Name=LPH41_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02565;old_locus_tag=LPH41_02565 NZ_CP087680.1 GeneMarkS-2+ CDS 547427 547576 . + 0 ID=cds-WP_160165143.1;Parent=gene-LPH41_RS02565;Dbxref=Genbank:WP_160165143.1;Name=WP_160165143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02565;product=hypothetical protein;protein_id=WP_160165143.1;transl_table=11 NZ_CP087680.1 RefSeq gene 547646 548224 . + . ID=gene-LPH41_RS02570;Name=LPH41_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02570;old_locus_tag=LPH41_02570 NZ_CP087680.1 Protein Homology CDS 547646 548224 . + 0 ID=cds-WP_038270659.1;Parent=gene-LPH41_RS02570;Dbxref=Genbank:WP_038270659.1;Name=WP_038270659.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090598.1;locus_tag=LPH41_RS02570;product=GNAT family N-acetyltransferase;protein_id=WP_038270659.1;transl_table=11 NZ_CP087680.1 RefSeq gene 548239 548967 . + . ID=gene-LPH41_RS02575;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LPH41_RS02575;old_locus_tag=LPH41_02575 NZ_CP087680.1 Protein Homology CDS 548239 548967 . + 0 ID=cds-WP_038270658.1;Parent=gene-LPH41_RS02575;Dbxref=Genbank:WP_038270658.1;Name=WP_038270658.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973818.1;locus_tag=LPH41_RS02575;product=septum site-determining protein MinC;protein_id=WP_038270658.1;transl_table=11 NZ_CP087680.1 RefSeq gene 549004 549813 . + . ID=gene-LPH41_RS02580;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LPH41_RS02580;old_locus_tag=LPH41_02580 NZ_CP087680.1 Protein Homology CDS 549004 549813 . + 0 ID=cds-WP_038270657.1;Parent=gene-LPH41_RS02580;Dbxref=Genbank:WP_038270657.1;Name=WP_038270657.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006424120.1;locus_tag=LPH41_RS02580;product=septum site-determining protein MinD;protein_id=WP_038270657.1;transl_table=11 NZ_CP087680.1 RefSeq gene 549816 550073 . + . ID=gene-LPH41_RS02585;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LPH41_RS02585;old_locus_tag=LPH41_02585 NZ_CP087680.1 Protein Homology CDS 549816 550073 . + 0 ID=cds-WP_038270656.1;Parent=gene-LPH41_RS02585;Dbxref=Genbank:WP_038270656.1;Name=WP_038270656.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036323.1;locus_tag=LPH41_RS02585;product=cell division topological specificity factor MinE;protein_id=WP_038270656.1;transl_table=11 NZ_CP087680.1 RefSeq gene 550134 550637 . + . ID=gene-LPH41_RS02590;Name=LPH41_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02590;old_locus_tag=LPH41_02590 NZ_CP087680.1 Protein Homology CDS 550134 550637 . + 0 ID=cds-WP_038270655.1;Parent=gene-LPH41_RS02590;Dbxref=Genbank:WP_038270655.1;Name=WP_038270655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851771.1;locus_tag=LPH41_RS02590;product=hypothetical protein;protein_id=WP_038270655.1;transl_table=11 NZ_CP087680.1 RefSeq gene 551089 552600 . - . ID=gene-LPH41_RS02595;Name=LPH41_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02595;old_locus_tag=LPH41_02595 NZ_CP087680.1 Protein Homology CDS 551089 552600 . - 0 ID=cds-WP_038270654.1;Parent=gene-LPH41_RS02595;Dbxref=Genbank:WP_038270654.1;Name=WP_038270654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851769.1;locus_tag=LPH41_RS02595;product=hypothetical protein;protein_id=WP_038270654.1;transl_table=11 NZ_CP087680.1 RefSeq gene 552705 554828 . - . ID=gene-LPH41_RS02600;Name=LPH41_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02600;old_locus_tag=LPH41_02600 NZ_CP087680.1 Protein Homology CDS 552705 554828 . - 0 ID=cds-WP_171898046.1;Parent=gene-LPH41_RS02600;Dbxref=Genbank:WP_171898046.1;Name=WP_171898046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852820.1;locus_tag=LPH41_RS02600;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_171898046.1;transl_table=11 NZ_CP087680.1 RefSeq gene 555959 556999 . - . ID=gene-LPH41_RS02605;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LPH41_RS02605;old_locus_tag=LPH41_02605 NZ_CP087680.1 Protein Homology CDS 555959 556999 . - 0 ID=cds-WP_038270651.1;Parent=gene-LPH41_RS02605;Dbxref=Genbank:WP_038270651.1;Name=WP_038270651.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851767.1;locus_tag=LPH41_RS02605;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_038270651.1;transl_table=11 NZ_CP087680.1 RefSeq gene 557100 558221 . - . ID=gene-LPH41_RS02610;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LPH41_RS02610;old_locus_tag=LPH41_02610 NZ_CP087680.1 Protein Homology CDS 557100 558221 . - 0 ID=cds-WP_038270650.1;Parent=gene-LPH41_RS02610;Dbxref=Genbank:WP_038270650.1;Name=WP_038270650.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159496.1;locus_tag=LPH41_RS02610;product=rod shape-determining protein RodA;protein_id=WP_038270650.1;transl_table=11 NZ_CP087680.1 RefSeq gene 558218 560281 . - . ID=gene-LPH41_RS02615;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LPH41_RS02615;old_locus_tag=LPH41_02615 NZ_CP087680.1 Protein Homology CDS 558218 560281 . - 0 ID=cds-WP_038270715.1;Parent=gene-LPH41_RS02615;Dbxref=Genbank:WP_038270715.1;Name=WP_038270715.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851765.1;locus_tag=LPH41_RS02615;product=penicillin-binding protein 2;protein_id=WP_038270715.1;transl_table=11 NZ_CP087680.1 RefSeq gene 560286 560771 . - . ID=gene-LPH41_RS02620;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LPH41_RS02620;old_locus_tag=LPH41_02620 NZ_CP087680.1 Protein Homology CDS 560286 560771 . - 0 ID=cds-WP_038270649.1;Parent=gene-LPH41_RS02620;Dbxref=Genbank:WP_038270649.1;Name=WP_038270649.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911183.1;locus_tag=LPH41_RS02620;product=rod shape-determining protein MreD;protein_id=WP_038270649.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 560903 561733 . - . ID=gene-LPH41_RS02625;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=LPH41_RS02625;old_locus_tag=LPH41_02625;partial=true;pseudo=true;start_range=.,560903 NZ_CP087680.1 Protein Homology CDS 560903 561733 . - 0 ID=cds-LPH41_RS02625;Parent=gene-LPH41_RS02625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089324.1;locus_tag=LPH41_RS02625;partial=true;product=rod shape-determining protein MreC;pseudo=true;start_range=.,560903;transl_table=11 NZ_CP087680.1 RefSeq gene 561929 562972 . - . ID=gene-LPH41_RS02630;Name=LPH41_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02630;old_locus_tag=LPH41_02630 NZ_CP087680.1 Protein Homology CDS 561929 562972 . - 0 ID=cds-WP_038270648.1;Parent=gene-LPH41_RS02630;Dbxref=Genbank:WP_038270648.1;Name=WP_038270648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083920.1;locus_tag=LPH41_RS02630;product=rod shape-determining protein;protein_id=WP_038270648.1;transl_table=11 NZ_CP087680.1 RefSeq gene 564185 564454 . - . ID=gene-LPH41_RS02635;Name=LPH41_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02635;old_locus_tag=LPH41_02635 NZ_CP087680.1 Protein Homology CDS 564185 564454 . - 0 ID=cds-WP_038270647.1;Parent=gene-LPH41_RS02635;Dbxref=Genbank:WP_038270647.1;Name=WP_038270647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098067.1;locus_tag=LPH41_RS02635;product=hypothetical protein;protein_id=WP_038270647.1;transl_table=11 NZ_CP087680.1 RefSeq gene 564533 564829 . - . ID=gene-LPH41_RS02640;Name=LPH41_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02640;old_locus_tag=LPH41_02640 NZ_CP087680.1 Protein Homology CDS 564533 564829 . - 0 ID=cds-WP_038270714.1;Parent=gene-LPH41_RS02640;Dbxref=Genbank:WP_038270714.1;Name=WP_038270714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084250.1;locus_tag=LPH41_RS02640;product=hypothetical protein;protein_id=WP_038270714.1;transl_table=11 NZ_CP087680.1 RefSeq gene 564884 565126 . - . ID=gene-LPH41_RS02645;Name=LPH41_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02645;old_locus_tag=LPH41_02645 NZ_CP087680.1 Protein Homology CDS 564884 565126 . - 0 ID=cds-WP_038270712.1;Parent=gene-LPH41_RS02645;Dbxref=Genbank:WP_038270712.1;Name=WP_038270712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090583.1;locus_tag=LPH41_RS02645;product=hypothetical protein;protein_id=WP_038270712.1;transl_table=11 NZ_CP087680.1 RefSeq gene 565139 565390 . - . ID=gene-LPH41_RS02650;Name=LPH41_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02650;old_locus_tag=LPH41_02650 NZ_CP087680.1 Protein Homology CDS 565139 565390 . - 0 ID=cds-WP_069636202.1;Parent=gene-LPH41_RS02650;Dbxref=Genbank:WP_069636202.1;Name=WP_069636202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337732.1;locus_tag=LPH41_RS02650;product=hypothetical protein;protein_id=WP_069636202.1;transl_table=11 NZ_CP087680.1 RefSeq gene 565853 566047 . - . ID=gene-LPH41_RS02655;Name=LPH41_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02655;old_locus_tag=LPH41_02655 NZ_CP087680.1 GeneMarkS-2+ CDS 565853 566047 . - 0 ID=cds-WP_152536587.1;Parent=gene-LPH41_RS02655;Dbxref=Genbank:WP_152536587.1;Name=WP_152536587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02655;product=hypothetical protein;protein_id=WP_152536587.1;transl_table=11 NZ_CP087680.1 RefSeq gene 566094 566336 . - . ID=gene-LPH41_RS02660;Name=LPH41_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02660;old_locus_tag=LPH41_02660 NZ_CP087680.1 GeneMarkS-2+ CDS 566094 566336 . - 0 ID=cds-WP_038270646.1;Parent=gene-LPH41_RS02660;Dbxref=Genbank:WP_038270646.1;Name=WP_038270646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02660;product=hypothetical protein;protein_id=WP_038270646.1;transl_table=11 NZ_CP087680.1 RefSeq gene 566388 566597 . - . ID=gene-LPH41_RS02665;Name=LPH41_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02665;old_locus_tag=LPH41_02665 NZ_CP087680.1 GeneMarkS-2+ CDS 566388 566597 . - 0 ID=cds-WP_152536586.1;Parent=gene-LPH41_RS02665;Dbxref=Genbank:WP_152536586.1;Name=WP_152536586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02665;product=hypothetical protein;protein_id=WP_152536586.1;transl_table=11 NZ_CP087680.1 RefSeq gene 566661 566882 . - . ID=gene-LPH41_RS02670;Name=LPH41_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02670;old_locus_tag=LPH41_02670 NZ_CP087680.1 GeneMarkS-2+ CDS 566661 566882 . - 0 ID=cds-WP_152536585.1;Parent=gene-LPH41_RS02670;Dbxref=Genbank:WP_152536585.1;Name=WP_152536585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02670;product=hypothetical protein;protein_id=WP_152536585.1;transl_table=11 NZ_CP087680.1 RefSeq gene 566938 567090 . - . ID=gene-LPH41_RS02675;Name=LPH41_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02675;old_locus_tag=LPH41_02675 NZ_CP087680.1 GeneMarkS-2+ CDS 566938 567090 . - 0 ID=cds-WP_162814086.1;Parent=gene-LPH41_RS02675;Dbxref=Genbank:WP_162814086.1;Name=WP_162814086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02675;product=hypothetical protein;protein_id=WP_162814086.1;transl_table=11 NZ_CP087680.1 RefSeq gene 567145 567312 . - . ID=gene-LPH41_RS02680;Name=LPH41_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02680;old_locus_tag=LPH41_02680 NZ_CP087680.1 GeneMarkS-2+ CDS 567145 567312 . - 0 ID=cds-WP_160165141.1;Parent=gene-LPH41_RS02680;Dbxref=Genbank:WP_160165141.1;Name=WP_160165141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02680;product=hypothetical protein;protein_id=WP_160165141.1;transl_table=11 NZ_CP087680.1 RefSeq gene 567369 567542 . - . ID=gene-LPH41_RS02685;Name=LPH41_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02685;old_locus_tag=LPH41_02685 NZ_CP087680.1 Protein Homology CDS 567369 567542 . - 0 ID=cds-WP_171898045.1;Parent=gene-LPH41_RS02685;Dbxref=Genbank:WP_171898045.1;Name=WP_171898045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090579.1;locus_tag=LPH41_RS02685;product=hypothetical protein;protein_id=WP_171898045.1;transl_table=11 NZ_CP087680.1 RefSeq gene 567874 569133 . - . ID=gene-LPH41_RS02690;Name=LPH41_RS02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02690;old_locus_tag=LPH41_02690 NZ_CP087680.1 Protein Homology CDS 567874 569133 . - 0 ID=cds-WP_038270645.1;Parent=gene-LPH41_RS02690;Dbxref=Genbank:WP_038270645.1;Name=WP_038270645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090578.1;locus_tag=LPH41_RS02690;product=threonine/serine exporter family protein;protein_id=WP_038270645.1;transl_table=11 NZ_CP087680.1 RefSeq gene 569270 570388 . + . ID=gene-LPH41_RS02695;Name=LPH41_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02695;old_locus_tag=LPH41_02695 NZ_CP087680.1 Protein Homology CDS 569270 570388 . + 0 ID=cds-WP_038270644.1;Parent=gene-LPH41_RS02695;Dbxref=Genbank:WP_038270644.1;Name=WP_038270644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090577.1;locus_tag=LPH41_RS02695;product=ABC transporter permease;protein_id=WP_038270644.1;transl_table=11 NZ_CP087680.1 RefSeq gene 570393 571232 . + . ID=gene-LPH41_RS02700;Name=LPH41_RS02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02700;old_locus_tag=LPH41_02700 NZ_CP087680.1 Protein Homology CDS 570393 571232 . + 0 ID=cds-WP_038270643.1;Parent=gene-LPH41_RS02700;Dbxref=Genbank:WP_038270643.1;Name=WP_038270643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090576.1;locus_tag=LPH41_RS02700;product=ABC transporter ATP-binding protein;protein_id=WP_038270643.1;transl_table=11 NZ_CP087680.1 RefSeq gene 571236 572162 . + . ID=gene-LPH41_RS02705;Name=LPH41_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02705;old_locus_tag=LPH41_02705 NZ_CP087680.1 Protein Homology CDS 571236 572162 . + 0 ID=cds-WP_038270642.1;Parent=gene-LPH41_RS02705;Dbxref=Genbank:WP_038270642.1;Name=WP_038270642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903957.1;locus_tag=LPH41_RS02705;product=MlaD family protein;protein_id=WP_038270642.1;transl_table=11 NZ_CP087680.1 RefSeq gene 572159 572800 . + . ID=gene-LPH41_RS02710;Name=LPH41_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02710;old_locus_tag=LPH41_02710 NZ_CP087680.1 Protein Homology CDS 572159 572800 . + 0 ID=cds-WP_038270640.1;Parent=gene-LPH41_RS02710;Dbxref=Genbank:WP_038270640.1;Name=WP_038270640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035875.1;locus_tag=LPH41_RS02710;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_038270640.1;transl_table=11 NZ_CP087680.1 RefSeq gene 573013 573597 . - . ID=gene-LPH41_RS02715;Name=LPH41_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02715;old_locus_tag=LPH41_02715 NZ_CP087680.1 Protein Homology CDS 573013 573597 . - 0 ID=cds-WP_038270710.1;Parent=gene-LPH41_RS02715;Dbxref=Genbank:WP_038270710.1;Name=WP_038270710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851530.1;locus_tag=LPH41_RS02715;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_038270710.1;transl_table=11 NZ_CP087680.1 RefSeq gene 573704 575350 . + . ID=gene-LPH41_RS02720;Name=LPH41_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02720;old_locus_tag=LPH41_02720 NZ_CP087680.1 Protein Homology CDS 573704 575350 . + 0 ID=cds-WP_038270639.1;Parent=gene-LPH41_RS02720;Dbxref=Genbank:WP_038270639.1;Name=WP_038270639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083995.1;locus_tag=LPH41_RS02720;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_038270639.1;transl_table=11 NZ_CP087680.1 RefSeq gene 575951 576973 . + . ID=gene-LPH41_RS02725;Name=LPH41_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02725;old_locus_tag=LPH41_02725 NZ_CP087680.1 Protein Homology CDS 575951 576973 . + 0 ID=cds-WP_038270637.1;Parent=gene-LPH41_RS02725;Dbxref=Genbank:WP_038270637.1;Name=WP_038270637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090566.1;locus_tag=LPH41_RS02725;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_038270637.1;transl_table=11 NZ_CP087680.1 RefSeq gene 577606 578148 . + . ID=gene-LPH41_RS02730;Name=LPH41_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02730;old_locus_tag=LPH41_02730 NZ_CP087680.1 Protein Homology CDS 577606 578148 . + 0 ID=cds-WP_038270636.1;Parent=gene-LPH41_RS02730;Dbxref=Genbank:WP_038270636.1;Name=WP_038270636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237727.1;locus_tag=LPH41_RS02730;product=Smr/MutS family protein;protein_id=WP_038270636.1;transl_table=11 NZ_CP087680.1 RefSeq gene 578369 578872 . - . ID=gene-LPH41_RS02735;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LPH41_RS02735;old_locus_tag=LPH41_02735 NZ_CP087680.1 Protein Homology CDS 578369 578872 . - 0 ID=cds-WP_038270708.1;Parent=gene-LPH41_RS02735;Dbxref=Genbank:WP_038270708.1;Name=WP_038270708.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090564.1;locus_tag=LPH41_RS02735;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_038270708.1;transl_table=11 NZ_CP087680.1 RefSeq gene 578900 579595 . - . ID=gene-LPH41_RS02740;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LPH41_RS02740;old_locus_tag=LPH41_02740 NZ_CP087680.1 Protein Homology CDS 578900 579595 . - 0 ID=cds-WP_038270634.1;Parent=gene-LPH41_RS02740;Dbxref=Genbank:WP_038270634.1;Name=WP_038270634.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893799.1;locus_tag=LPH41_RS02740;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_038270634.1;transl_table=11 NZ_CP087680.1 RefSeq gene 579592 579948 . - . ID=gene-LPH41_RS02745;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LPH41_RS02745;old_locus_tag=LPH41_02745 NZ_CP087680.1 Protein Homology CDS 579592 579948 . - 0 ID=cds-WP_038270632.1;Parent=gene-LPH41_RS02745;Dbxref=Genbank:WP_038270632.1;Name=WP_038270632.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097688.1;locus_tag=LPH41_RS02745;product=cell division protein FtsB;protein_id=WP_038270632.1;transl_table=11 NZ_CP087680.1 RefSeq gene 579952 581244 . - . ID=gene-LPH41_RS02750;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LPH41_RS02750;old_locus_tag=LPH41_02750 NZ_CP087680.1 Protein Homology CDS 579952 581244 . - 0 ID=cds-WP_038270631.1;Parent=gene-LPH41_RS02750;Dbxref=Genbank:WP_038270631.1;Name=WP_038270631.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808113.1;locus_tag=LPH41_RS02750;product=phosphopyruvate hydratase;protein_id=WP_038270631.1;transl_table=11 NZ_CP087680.1 RefSeq gene 581877 582707 . - . ID=gene-LPH41_RS02755;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LPH41_RS02755;old_locus_tag=LPH41_02755 NZ_CP087680.1 Protein Homology CDS 581877 582707 . - 0 ID=cds-WP_038270707.1;Parent=gene-LPH41_RS02755;Dbxref=Genbank:WP_038270707.1;Name=WP_038270707.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893795.1;locus_tag=LPH41_RS02755;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_038270707.1;transl_table=11 NZ_CP087680.1 RefSeq gene 582849 584513 . - . ID=gene-LPH41_RS02760;Name=LPH41_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02760;old_locus_tag=LPH41_02760 NZ_CP087680.1 Protein Homology CDS 582849 584513 . - 0 ID=cds-WP_038270629.1;Parent=gene-LPH41_RS02760;Dbxref=Genbank:WP_038270629.1;Name=WP_038270629.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851538.1;locus_tag=LPH41_RS02760;product=CTP synthase;protein_id=WP_038270629.1;transl_table=11 NZ_CP087680.1 RefSeq gene 584662 584958 . - . ID=gene-LPH41_RS02765;Name=LPH41_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02765;old_locus_tag=LPH41_02765 NZ_CP087680.1 GeneMarkS-2+ CDS 584662 584958 . - 0 ID=cds-WP_230439318.1;Parent=gene-LPH41_RS02765;Dbxref=Genbank:WP_230439318.1;Name=WP_230439318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02765;product=hypothetical protein;protein_id=WP_230439318.1;transl_table=11 NZ_CP087680.1 RefSeq gene 585133 587022 . + . ID=gene-LPH41_RS02770;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LPH41_RS02770;old_locus_tag=LPH41_02770 NZ_CP087680.1 Protein Homology CDS 585133 587022 . + 0 ID=cds-WP_038270628.1;Parent=gene-LPH41_RS02770;Dbxref=Genbank:WP_038270628.1;Name=WP_038270628.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237730.1;locus_tag=LPH41_RS02770;product=DNA topoisomerase IV subunit B;protein_id=WP_038270628.1;transl_table=11 NZ_CP087680.1 RefSeq gene 587976 588173 . - . ID=gene-LPH41_RS02775;Name=LPH41_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02775;old_locus_tag=LPH41_02775 NZ_CP087680.1 GeneMarkS-2+ CDS 587976 588173 . - 0 ID=cds-WP_162814085.1;Parent=gene-LPH41_RS02775;Dbxref=Genbank:WP_162814085.1;Name=WP_162814085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02775;product=hypothetical protein;protein_id=WP_162814085.1;transl_table=11 NZ_CP087680.1 RefSeq gene 588174 589685 . + . ID=gene-LPH41_RS02780;Name=LPH41_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02780;old_locus_tag=LPH41_02780 NZ_CP087680.1 Protein Homology CDS 588174 589685 . + 0 ID=cds-WP_038270627.1;Parent=gene-LPH41_RS02780;Dbxref=Genbank:WP_038270627.1;Name=WP_038270627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893788.1;locus_tag=LPH41_RS02780;product=S10 family peptidase;protein_id=WP_038270627.1;transl_table=11 NZ_CP087680.1 RefSeq gene 590368 591681 . + . ID=gene-LPH41_RS02785;Name=LPH41_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02785;old_locus_tag=LPH41_02785 NZ_CP087680.1 Protein Homology CDS 590368 591681 . + 0 ID=cds-WP_038270626.1;Parent=gene-LPH41_RS02785;Dbxref=Genbank:WP_038270626.1;Name=WP_038270626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051102.1;locus_tag=LPH41_RS02785;product=hemolysin family protein;protein_id=WP_038270626.1;transl_table=11 NZ_CP087680.1 RefSeq gene 591985 592317 . - . ID=gene-LPH41_RS02790;Name=LPH41_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02790;old_locus_tag=LPH41_02790 NZ_CP087680.1 GeneMarkS-2+ CDS 591985 592317 . - 0 ID=cds-WP_200866183.1;Parent=gene-LPH41_RS02790;Dbxref=Genbank:WP_200866183.1;Name=WP_200866183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02790;product=hypothetical protein;protein_id=WP_200866183.1;transl_table=11 NZ_CP087680.1 RefSeq gene 592314 592772 . - . ID=gene-LPH41_RS02795;Name=LPH41_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02795;old_locus_tag=LPH41_02795 NZ_CP087680.1 GeneMarkS-2+ CDS 592314 592772 . - 0 ID=cds-WP_200866182.1;Parent=gene-LPH41_RS02795;Dbxref=Genbank:WP_200866182.1;Name=WP_200866182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02795;product=hypothetical protein;protein_id=WP_200866182.1;transl_table=11 NZ_CP087680.1 RefSeq gene 593186 593344 . - . ID=gene-LPH41_RS02800;Name=LPH41_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02800;old_locus_tag=LPH41_02800 NZ_CP087680.1 GeneMarkS-2+ CDS 593186 593344 . - 0 ID=cds-WP_160165139.1;Parent=gene-LPH41_RS02800;Dbxref=Genbank:WP_160165139.1;Name=WP_160165139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02800;product=hypothetical protein;protein_id=WP_160165139.1;transl_table=11 NZ_CP087680.1 RefSeq gene 593723 594211 . - . ID=gene-LPH41_RS02805;Name=LPH41_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02805;old_locus_tag=LPH41_02805 NZ_CP087680.1 GeneMarkS-2+ CDS 593723 594211 . - 0 ID=cds-WP_051482272.1;Parent=gene-LPH41_RS02805;Dbxref=Genbank:WP_051482272.1;Name=WP_051482272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02805;product=hypothetical protein;protein_id=WP_051482272.1;transl_table=11 NZ_CP087680.1 RefSeq gene 594774 594956 . - . ID=gene-LPH41_RS02810;Name=LPH41_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02810;old_locus_tag=LPH41_02810 NZ_CP087680.1 GeneMarkS-2+ CDS 594774 594956 . - 0 ID=cds-WP_038270624.1;Parent=gene-LPH41_RS02810;Dbxref=Genbank:WP_038270624.1;Name=WP_038270624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02810;product=hypothetical protein;protein_id=WP_038270624.1;transl_table=11 NZ_CP087680.1 RefSeq gene 595504 596514 . - . ID=gene-LPH41_RS02815;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LPH41_RS02815;old_locus_tag=LPH41_02815 NZ_CP087680.1 Protein Homology CDS 595504 596514 . - 0 ID=cds-WP_038270623.1;Parent=gene-LPH41_RS02815;Dbxref=Genbank:WP_038270623.1;Name=WP_038270623.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090539.1;locus_tag=LPH41_RS02815;product=lipoyl synthase;protein_id=WP_038270623.1;transl_table=11 NZ_CP087680.1 RefSeq gene 596531 597166 . - . ID=gene-LPH41_RS02820;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LPH41_RS02820;old_locus_tag=LPH41_02820 NZ_CP087680.1 Protein Homology CDS 596531 597166 . - 0 ID=cds-WP_230428276.1;Parent=gene-LPH41_RS02820;Dbxref=Genbank:WP_230428276.1;Name=WP_230428276.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084036.1;locus_tag=LPH41_RS02820;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_230428276.1;transl_table=11 NZ_CP087680.1 RefSeq gene 597220 597498 . - . ID=gene-LPH41_RS02825;Name=LPH41_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02825;old_locus_tag=LPH41_02825 NZ_CP087680.1 Protein Homology CDS 597220 597498 . - 0 ID=cds-WP_038270621.1;Parent=gene-LPH41_RS02825;Dbxref=Genbank:WP_038270621.1;Name=WP_038270621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852798.1;locus_tag=LPH41_RS02825;product=DUF493 family protein;protein_id=WP_038270621.1;transl_table=11 NZ_CP087680.1 RefSeq gene 598208 599008 . - . ID=gene-LPH41_RS02830;Name=LPH41_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02830;old_locus_tag=LPH41_02830 NZ_CP087680.1 Protein Homology CDS 598208 599008 . - 0 ID=cds-WP_038270619.1;Parent=gene-LPH41_RS02830;Dbxref=Genbank:WP_038270619.1;Name=WP_038270619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904651.1;locus_tag=LPH41_RS02830;product=FHA domain-containing protein;protein_id=WP_038270619.1;transl_table=11 NZ_CP087680.1 RefSeq gene 599524 600018 . + . ID=gene-LPH41_RS02835;Name=LPH41_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02835;old_locus_tag=LPH41_02835 NZ_CP087680.1 Protein Homology CDS 599524 600018 . + 0 ID=cds-WP_038270618.1;Parent=gene-LPH41_RS02835;Dbxref=Genbank:WP_038270618.1;Name=WP_038270618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852801.1;locus_tag=LPH41_RS02835;product=phasin family protein;protein_id=WP_038270618.1;transl_table=11 NZ_CP087680.1 RefSeq gene 601501 602811 . + . ID=gene-LPH41_RS02840;Name=LPH41_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02840;old_locus_tag=LPH41_02840 NZ_CP087680.1 Protein Homology CDS 601501 602811 . + 0 ID=cds-WP_038270615.1;Parent=gene-LPH41_RS02840;Dbxref=Genbank:WP_038270615.1;Name=WP_038270615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893784.1;locus_tag=LPH41_RS02840;product=DUF445 domain-containing protein;protein_id=WP_038270615.1;transl_table=11 NZ_CP087680.1 RefSeq gene 604848 607028 . + . ID=gene-LPH41_RS02845;Name=LPH41_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02845;old_locus_tag=LPH41_02845 NZ_CP087680.1 Protein Homology CDS 604848 607028 . + 0 ID=cds-WP_038270614.1;Parent=gene-LPH41_RS02845;Dbxref=Genbank:WP_038270614.1;Name=WP_038270614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337710.1;locus_tag=LPH41_RS02845;product=autotransporter domain-containing protein;protein_id=WP_038270614.1;transl_table=11 NZ_CP087680.1 RefSeq gene 607641 608129 . - . ID=gene-LPH41_RS02850;Name=LPH41_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02850;old_locus_tag=LPH41_02850 NZ_CP087680.1 Protein Homology CDS 607641 608129 . - 0 ID=cds-WP_038270613.1;Parent=gene-LPH41_RS02850;Dbxref=Genbank:WP_038270613.1;Name=WP_038270613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012511421.1;locus_tag=LPH41_RS02850;product=8-oxo-dGTP diphosphatase;protein_id=WP_038270613.1;transl_table=11 NZ_CP087680.1 RefSeq gene 608197 608670 . - . ID=gene-LPH41_RS02855;Name=LPH41_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02855;old_locus_tag=LPH41_02855 NZ_CP087680.1 Protein Homology CDS 608197 608670 . - 0 ID=cds-WP_038270612.1;Parent=gene-LPH41_RS02855;Dbxref=Genbank:WP_038270612.1;Name=WP_038270612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010342959.1;locus_tag=LPH41_RS02855;product=DUF1249 domain-containing protein;protein_id=WP_038270612.1;transl_table=11 NZ_CP087680.1 RefSeq gene 608782 609603 . - . ID=gene-LPH41_RS02860;Name=LPH41_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02860;old_locus_tag=LPH41_02860 NZ_CP087680.1 Protein Homology CDS 608782 609603 . - 0 ID=cds-WP_038270611.1;Parent=gene-LPH41_RS02860;Dbxref=Genbank:WP_038270611.1;Name=WP_038270611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037311.1;locus_tag=LPH41_RS02860;product=kinase/pyrophosphorylase;protein_id=WP_038270611.1;transl_table=11 NZ_CP087680.1 RefSeq gene 609751 612126 . + . ID=gene-LPH41_RS02865;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LPH41_RS02865;old_locus_tag=LPH41_02865 NZ_CP087680.1 Protein Homology CDS 609751 612126 . + 0 ID=cds-WP_038270703.1;Parent=gene-LPH41_RS02865;Dbxref=Genbank:WP_038270703.1;Name=WP_038270703.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097678.1;locus_tag=LPH41_RS02865;product=phosphoenolpyruvate synthase;protein_id=WP_038270703.1;transl_table=11 NZ_CP087680.1 RefSeq gene 612126 613073 . + . ID=gene-LPH41_RS02870;Name=LPH41_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02870;old_locus_tag=LPH41_02870 NZ_CP087680.1 Protein Homology CDS 612126 613073 . + 0 ID=cds-WP_038270610.1;Parent=gene-LPH41_RS02870;Dbxref=Genbank:WP_038270610.1;Name=WP_038270610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084046.1;locus_tag=LPH41_RS02870;product=mechanosensitive ion channel family protein;protein_id=WP_038270610.1;transl_table=11 NZ_CP087680.1 RefSeq gene 613247 613828 . - . ID=gene-LPH41_RS02875;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LPH41_RS02875;old_locus_tag=LPH41_02875 NZ_CP087680.1 Protein Homology CDS 613247 613828 . - 0 ID=cds-WP_038270608.1;Parent=gene-LPH41_RS02875;Dbxref=Genbank:WP_038270608.1;Name=WP_038270608.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852363.1;locus_tag=LPH41_RS02875;product=oligoribonuclease;protein_id=WP_038270608.1;transl_table=11 NZ_CP087680.1 RefSeq gene 614852 615868 . + . ID=gene-LPH41_RS02880;Name=LPH41_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02880;old_locus_tag=LPH41_02880 NZ_CP087680.1 Protein Homology CDS 614852 615868 . + 0 ID=cds-WP_038270607.1;Parent=gene-LPH41_RS02880;Dbxref=Genbank:WP_038270607.1;Name=WP_038270607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_263987317.1;locus_tag=LPH41_RS02880;product=M4 family metallopeptidase;protein_id=WP_038270607.1;transl_table=11 NZ_CP087680.1 RefSeq gene 615865 616197 . + . ID=gene-LPH41_RS02885;Name=LPH41_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02885;old_locus_tag=LPH41_02885 NZ_CP087680.1 Protein Homology CDS 615865 616197 . + 0 ID=cds-WP_038270606.1;Parent=gene-LPH41_RS02885;Dbxref=Genbank:WP_038270606.1;Name=WP_038270606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671321.1;locus_tag=LPH41_RS02885;product=hypothetical protein;protein_id=WP_038270606.1;transl_table=11 NZ_CP087680.1 RefSeq gene 617861 618022 . + . ID=gene-LPH41_RS02890;Name=LPH41_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02890;old_locus_tag=LPH41_02890 NZ_CP087680.1 GeneMarkS-2+ CDS 617861 618022 . + 0 ID=cds-WP_160165137.1;Parent=gene-LPH41_RS02890;Dbxref=Genbank:WP_160165137.1;Name=WP_160165137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02890;product=hypothetical protein;protein_id=WP_160165137.1;transl_table=11 NZ_CP087680.1 RefSeq gene 619267 620136 . - . ID=gene-LPH41_RS02895;Name=LPH41_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02895;old_locus_tag=LPH41_02895 NZ_CP087680.1 Protein Homology CDS 619267 620136 . - 0 ID=cds-WP_038270605.1;Parent=gene-LPH41_RS02895;Dbxref=Genbank:WP_038270605.1;Name=WP_038270605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852361.1;locus_tag=LPH41_RS02895;product=AraC family transcriptional regulator;protein_id=WP_038270605.1;transl_table=11 NZ_CP087680.1 RefSeq gene 620361 621374 . + . ID=gene-LPH41_RS02900;Name=LPH41_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02900;old_locus_tag=LPH41_02900 NZ_CP087680.1 Protein Homology CDS 620361 621374 . + 0 ID=cds-WP_038270604.1;Parent=gene-LPH41_RS02900;Dbxref=Genbank:WP_038270604.1;Name=WP_038270604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087377.1;locus_tag=LPH41_RS02900;product=alpha/beta hydrolase;protein_id=WP_038270604.1;transl_table=11 NZ_CP087680.1 RefSeq gene 622376 623176 . + . ID=gene-LPH41_RS02905;Name=LPH41_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02905;old_locus_tag=LPH41_02905 NZ_CP087680.1 Protein Homology CDS 622376 623176 . + 0 ID=cds-WP_038270603.1;Parent=gene-LPH41_RS02905;Dbxref=Genbank:WP_038270603.1;Name=WP_038270603.1;Ontology_term=GO:0035444,GO:0015099;gbkey=CDS;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010953868.1;locus_tag=LPH41_RS02905;product=nickel/cobalt efflux transporter;protein_id=WP_038270603.1;transl_table=11 NZ_CP087680.1 RefSeq gene 623189 623455 . + . ID=gene-LPH41_RS02910;Name=LPH41_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02910;old_locus_tag=LPH41_02910 NZ_CP087680.1 Protein Homology CDS 623189 623455 . + 0 ID=cds-WP_038270602.1;Parent=gene-LPH41_RS02910;Dbxref=Genbank:WP_038270602.1;Name=WP_038270602.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014624.2;locus_tag=LPH41_RS02910;product=metal-sensing transcriptional repressor;protein_id=WP_038270602.1;transl_table=11 NZ_CP087680.1 RefSeq gene 624005 628930 . - . ID=gene-LPH41_RS02915;Name=LPH41_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02915;old_locus_tag=LPH41_02915 NZ_CP087680.1 Protein Homology CDS 624005 628930 . - 0 ID=cds-WP_038270601.1;Parent=gene-LPH41_RS02915;Dbxref=Genbank:WP_038270601.1;Name=WP_038270601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337707.1;locus_tag=LPH41_RS02915;product=alpha-2-macroglobulin;protein_id=WP_038270601.1;transl_table=11 NZ_CP087680.1 RefSeq gene 629280 629468 . - . ID=gene-LPH41_RS02920;Name=LPH41_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02920;old_locus_tag=LPH41_02920 NZ_CP087680.1 GeneMarkS-2+ CDS 629280 629468 . - 0 ID=cds-WP_038270600.1;Parent=gene-LPH41_RS02920;Dbxref=Genbank:WP_038270600.1;Name=WP_038270600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02920;product=hypothetical protein;protein_id=WP_038270600.1;transl_table=11 NZ_CP087680.1 RefSeq gene 629688 629870 . + . ID=gene-LPH41_RS02925;Name=LPH41_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02925;old_locus_tag=LPH41_02925 NZ_CP087680.1 GeneMarkS-2+ CDS 629688 629870 . + 0 ID=cds-WP_152536584.1;Parent=gene-LPH41_RS02925;Dbxref=Genbank:WP_152536584.1;Name=WP_152536584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02925;product=hypothetical protein;protein_id=WP_152536584.1;transl_table=11 NZ_CP087680.1 RefSeq gene 629893 630804 . + . ID=gene-LPH41_RS02930;Name=LPH41_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02930;old_locus_tag=LPH41_02930 NZ_CP087680.1 Protein Homology CDS 629893 630804 . + 0 ID=cds-WP_230428172.1;Parent=gene-LPH41_RS02930;Dbxref=Genbank:WP_230428172.1;Name=WP_230428172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087380.1;locus_tag=LPH41_RS02930;product=hypothetical protein;protein_id=WP_230428172.1;transl_table=11 NZ_CP087680.1 RefSeq gene 632716 632844 . - . ID=gene-LPH41_RS11965;Name=LPH41_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11965 NZ_CP087680.1 GeneMarkS-2+ CDS 632716 632844 . - 0 ID=cds-WP_267903174.1;Parent=gene-LPH41_RS11965;Dbxref=Genbank:WP_267903174.1;Name=WP_267903174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11965;product=hypothetical protein;protein_id=WP_267903174.1;transl_table=11 NZ_CP087680.1 RefSeq gene 633066 634262 . - . ID=gene-LPH41_RS02935;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=LPH41_RS02935;old_locus_tag=LPH41_02935 NZ_CP087680.1 Protein Homology CDS 633066 634262 . - 0 ID=cds-WP_038270598.1;Parent=gene-LPH41_RS02935;Dbxref=Genbank:WP_038270598.1;Name=WP_038270598.1;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097671.1;locus_tag=LPH41_RS02935;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_038270598.1;transl_table=11 NZ_CP087680.1 RefSeq gene 634630 637254 . - . ID=gene-LPH41_RS02940;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=LPH41_RS02940;old_locus_tag=LPH41_02940 NZ_CP087680.1 Protein Homology CDS 634630 637254 . - 0 ID=cds-WP_038270597.1;Parent=gene-LPH41_RS02940;Dbxref=Genbank:WP_038270597.1;Name=WP_038270597.1;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849833.1;locus_tag=LPH41_RS02940;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_038270597.1;transl_table=11 NZ_CP087680.1 RefSeq gene 637251 637376 . - . ID=gene-LPH41_RS11970;Name=LPH41_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11970 NZ_CP087680.1 GeneMarkS-2+ CDS 637251 637376 . - 0 ID=cds-WP_267903173.1;Parent=gene-LPH41_RS11970;Dbxref=Genbank:WP_267903173.1;Name=WP_267903173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11970;product=hypothetical protein;protein_id=WP_267903173.1;transl_table=11 NZ_CP087680.1 RefSeq gene 637379 637918 . - . ID=gene-LPH41_RS02945;Name=LPH41_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02945;old_locus_tag=LPH41_02945 NZ_CP087680.1 Protein Homology CDS 637379 637918 . - 0 ID=cds-WP_081755406.1;Parent=gene-LPH41_RS02945;Dbxref=Genbank:WP_081755406.1;Name=WP_081755406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012506.2;locus_tag=LPH41_RS02945;product=hypothetical protein;protein_id=WP_081755406.1;transl_table=11 NZ_CP087680.1 RefSeq gene 637830 638171 . + . ID=gene-LPH41_RS02950;Name=LPH41_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02950;old_locus_tag=LPH41_02950 NZ_CP087680.1 GeneMarkS-2+ CDS 637830 638171 . + 0 ID=cds-WP_051482270.1;Parent=gene-LPH41_RS02950;Dbxref=Genbank:WP_051482270.1;Name=WP_051482270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02950;product=hypothetical protein;protein_id=WP_051482270.1;transl_table=11 NZ_CP087680.1 RefSeq gene 638260 639159 . - . ID=gene-LPH41_RS02955;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=LPH41_RS02955;old_locus_tag=LPH41_02955 NZ_CP087680.1 Protein Homology CDS 638260 639159 . - 0 ID=cds-WP_038270595.1;Parent=gene-LPH41_RS02955;Dbxref=Genbank:WP_038270595.1;Name=WP_038270595.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337702.1;locus_tag=LPH41_RS02955;product=methylisocitrate lyase;protein_id=WP_038270595.1;transl_table=11 NZ_CP087680.1 RefSeq gene 640234 644016 . - . ID=gene-LPH41_RS02960;Name=LPH41_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02960;old_locus_tag=LPH41_02960 NZ_CP087680.1 Protein Homology CDS 640234 644016 . - 0 ID=cds-WP_230428275.1;Parent=gene-LPH41_RS02960;Dbxref=Genbank:WP_230428275.1;Name=WP_230428275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087207.1;locus_tag=LPH41_RS02960;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_230428275.1;transl_table=11 NZ_CP087680.1 RefSeq gene 644067 645848 . - . ID=gene-LPH41_RS02965;Name=LPH41_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02965;old_locus_tag=LPH41_02965 NZ_CP087680.1 Protein Homology CDS 644067 645848 . - 0 ID=cds-WP_051482268.1;Parent=gene-LPH41_RS02965;Dbxref=Genbank:WP_051482268.1;Name=WP_051482268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260618.1;locus_tag=LPH41_RS02965;product=autotransporter assembly complex protein TamA;protein_id=WP_051482268.1;transl_table=11 NZ_CP087680.1 RefSeq gene 647040 647522 . + . ID=gene-LPH41_RS02970;Name=LPH41_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02970;old_locus_tag=LPH41_02970 NZ_CP087680.1 Protein Homology CDS 647040 647522 . + 0 ID=cds-WP_038270592.1;Parent=gene-LPH41_RS02970;Dbxref=Genbank:WP_038270592.1;Name=WP_038270592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084082.1;locus_tag=LPH41_RS02970;product=GAF domain-containing protein;protein_id=WP_038270592.1;transl_table=11 NZ_CP087680.1 RefSeq gene 647528 647716 . + . ID=gene-LPH41_RS02975;Name=LPH41_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02975;old_locus_tag=LPH41_02975 NZ_CP087680.1 GeneMarkS-2+ CDS 647528 647716 . + 0 ID=cds-WP_152536583.1;Parent=gene-LPH41_RS02975;Dbxref=Genbank:WP_152536583.1;Name=WP_152536583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS02975;product=hypothetical protein;protein_id=WP_152536583.1;transl_table=11 NZ_CP087680.1 RefSeq gene 649315 651816 . + . ID=gene-LPH41_RS02980;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=LPH41_RS02980;old_locus_tag=LPH41_02980 NZ_CP087680.1 Protein Homology CDS 649315 651816 . + 0 ID=cds-WP_038270589.1;Parent=gene-LPH41_RS02980;Dbxref=Genbank:WP_038270589.1;Name=WP_038270589.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851559.1;locus_tag=LPH41_RS02980;product=ATP-dependent helicase HrpB;protein_id=WP_038270589.1;transl_table=11 NZ_CP087680.1 RefSeq gene 652075 652464 . + . ID=gene-LPH41_RS02985;Name=LPH41_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02985;old_locus_tag=LPH41_02985 NZ_CP087680.1 Protein Homology CDS 652075 652464 . + 0 ID=cds-WP_038270588.1;Parent=gene-LPH41_RS02985;Dbxref=Genbank:WP_038270588.1;Name=WP_038270588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851560.1;locus_tag=LPH41_RS02985;product=hypothetical protein;protein_id=WP_038270588.1;transl_table=11 NZ_CP087680.1 RefSeq gene 653899 654375 . + . ID=gene-LPH41_RS02990;Name=LPH41_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02990;old_locus_tag=LPH41_02990 NZ_CP087680.1 Protein Homology CDS 653899 654375 . + 0 ID=cds-WP_038270586.1;Parent=gene-LPH41_RS02990;Dbxref=Genbank:WP_038270586.1;Name=WP_038270586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337698.1;locus_tag=LPH41_RS02990;product=hypothetical protein;protein_id=WP_038270586.1;transl_table=11 NZ_CP087680.1 RefSeq gene 655026 658712 . - . ID=gene-LPH41_RS02995;Name=LPH41_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS02995;old_locus_tag=LPH41_02995 NZ_CP087680.1 Protein Homology CDS 655026 658712 . - 0 ID=cds-WP_114867210.1;Parent=gene-LPH41_RS02995;Dbxref=Genbank:WP_114867210.1;Name=WP_114867210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097665.1;locus_tag=LPH41_RS02995;product=pilus assembly protein;protein_id=WP_114867210.1;transl_table=11 NZ_CP087680.1 RefSeq gene 659689 660669 . + . ID=gene-LPH41_RS03000;Name=LPH41_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03000;old_locus_tag=LPH41_03000 NZ_CP087680.1 Protein Homology CDS 659689 660669 . + 0 ID=cds-WP_051482378.1;Parent=gene-LPH41_RS03000;Dbxref=Genbank:WP_051482378.1;Name=WP_051482378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090226.1;locus_tag=LPH41_RS03000;product=ABC transporter ATP-binding protein;protein_id=WP_051482378.1;transl_table=11 NZ_CP087680.1 RefSeq gene 660703 661482 . + . ID=gene-LPH41_RS03005;Name=LPH41_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03005;old_locus_tag=LPH41_03005 NZ_CP087680.1 Protein Homology CDS 660703 661482 . + 0 ID=cds-WP_038272700.1;Parent=gene-LPH41_RS03005;Dbxref=Genbank:WP_038272700.1;Name=WP_038272700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893730.1;locus_tag=LPH41_RS03005;product=ABC transporter permease;protein_id=WP_038272700.1;transl_table=11 NZ_CP087680.1 RefSeq gene 662489 664600 . - . ID=gene-LPH41_RS03010;Name=LPH41_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03010;old_locus_tag=LPH41_03010 NZ_CP087680.1 Protein Homology CDS 662489 664600 . - 0 ID=cds-WP_038272702.1;Parent=gene-LPH41_RS03010;Dbxref=Genbank:WP_038272702.1;Name=WP_038272702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090222.1;locus_tag=LPH41_RS03010;product=peptidase domain-containing ABC transporter;protein_id=WP_038272702.1;transl_table=11 NZ_CP087680.1 RefSeq gene 665038 665268 . - . ID=gene-LPH41_RS03015;Name=LPH41_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03015;old_locus_tag=LPH41_03015 NZ_CP087680.1 GeneMarkS-2+ CDS 665038 665268 . - 0 ID=cds-WP_152536657.1;Parent=gene-LPH41_RS03015;Dbxref=Genbank:WP_152536657.1;Name=WP_152536657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03015;product=hypothetical protein;protein_id=WP_152536657.1;transl_table=11 NZ_CP087680.1 RefSeq gene 665480 665743 . - . ID=gene-LPH41_RS03020;Name=LPH41_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03020;old_locus_tag=LPH41_03020 NZ_CP087680.1 Protein Homology CDS 665480 665743 . - 0 ID=cds-WP_081755482.1;Parent=gene-LPH41_RS03020;Dbxref=Genbank:WP_081755482.1;Name=WP_081755482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893727.1;locus_tag=LPH41_RS03020;product=hypothetical protein;protein_id=WP_081755482.1;transl_table=11 NZ_CP087680.1 RefSeq gene 665944 666234 . - . ID=gene-LPH41_RS03025;Name=LPH41_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03025;old_locus_tag=LPH41_03025 NZ_CP087680.1 Protein Homology CDS 665944 666234 . - 0 ID=cds-WP_230428171.1;Parent=gene-LPH41_RS03025;Dbxref=Genbank:WP_230428171.1;Name=WP_230428171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893726.1;locus_tag=LPH41_RS03025;product=hypothetical protein;protein_id=WP_230428171.1;transl_table=11 NZ_CP087680.1 RefSeq gene 666428 666661 . - . ID=gene-LPH41_RS03030;Name=LPH41_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03030;old_locus_tag=LPH41_03030 NZ_CP087680.1 Protein Homology CDS 666428 666661 . - 0 ID=cds-WP_230430678.1;Parent=gene-LPH41_RS03030;Dbxref=Genbank:WP_230430678.1;Name=WP_230430678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090213.1;locus_tag=LPH41_RS03030;product=hypothetical protein;protein_id=WP_230430678.1;transl_table=11 NZ_CP087680.1 RefSeq gene 666880 668142 . - . ID=gene-LPH41_RS03035;Name=LPH41_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03035;old_locus_tag=LPH41_03035 NZ_CP087680.1 Protein Homology CDS 666880 668142 . - 0 ID=cds-WP_038272708.1;Parent=gene-LPH41_RS03035;Dbxref=Genbank:WP_038272708.1;Name=WP_038272708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893724.1;locus_tag=LPH41_RS03035;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_038272708.1;transl_table=11 NZ_CP087680.1 RefSeq gene 668188 668418 . - . ID=gene-LPH41_RS03040;Name=LPH41_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03040;old_locus_tag=LPH41_03040 NZ_CP087680.1 GeneMarkS-2+ CDS 668188 668418 . - 0 ID=cds-WP_152536658.1;Parent=gene-LPH41_RS03040;Dbxref=Genbank:WP_152536658.1;Name=WP_152536658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03040;product=hypothetical protein;protein_id=WP_152536658.1;transl_table=11 NZ_CP087680.1 RefSeq gene 668717 669202 . - . ID=gene-LPH41_RS03045;Name=LPH41_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03045;old_locus_tag=LPH41_03045 NZ_CP087680.1 Protein Homology CDS 668717 669202 . - 0 ID=cds-WP_038272710.1;Parent=gene-LPH41_RS03045;Dbxref=Genbank:WP_038272710.1;Name=WP_038272710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300716.1;locus_tag=LPH41_RS03045;product=DUF2127 domain-containing protein;protein_id=WP_038272710.1;transl_table=11 NZ_CP087680.1 RefSeq gene 669222 671051 . - . ID=gene-LPH41_RS03050;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LPH41_RS03050;old_locus_tag=LPH41_03050 NZ_CP087680.1 Protein Homology CDS 669222 671051 . - 0 ID=cds-WP_038272712.1;Parent=gene-LPH41_RS03050;Dbxref=Genbank:WP_038272712.1;Name=WP_038272712.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904579.1;locus_tag=LPH41_RS03050;product=translational GTPase TypA;protein_id=WP_038272712.1;transl_table=11 NZ_CP087680.1 RefSeq gene 671285 671779 . + . ID=gene-LPH41_RS03055;Name=LPH41_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03055;old_locus_tag=LPH41_03055 NZ_CP087680.1 Protein Homology CDS 671285 671779 . + 0 ID=cds-WP_038272714.1;Parent=gene-LPH41_RS03055;Dbxref=Genbank:WP_038272714.1;Name=WP_038272714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090205.1;locus_tag=LPH41_RS03055;product=peptidylprolyl isomerase;protein_id=WP_038272714.1;transl_table=11 NZ_CP087680.1 RefSeq gene 671916 672902 . + . ID=gene-LPH41_RS03060;Name=LPH41_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03060;old_locus_tag=LPH41_03060 NZ_CP087680.1 Protein Homology CDS 671916 672902 . + 0 ID=cds-WP_038272716.1;Parent=gene-LPH41_RS03060;Dbxref=Genbank:WP_038272716.1;Name=WP_038272716.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003653591.1;locus_tag=LPH41_RS03060;product=malate dehydrogenase;protein_id=WP_038272716.1;transl_table=11 NZ_CP087680.1 RefSeq gene 673075 673692 . - . ID=gene-LPH41_RS03065;Name=LPH41_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03065;old_locus_tag=LPH41_03065 NZ_CP087680.1 Protein Homology CDS 673075 673692 . - 0 ID=cds-WP_038272719.1;Parent=gene-LPH41_RS03065;Dbxref=Genbank:WP_038272719.1;Name=WP_038272719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090201.1;locus_tag=LPH41_RS03065;product=glutathione binding-like protein;protein_id=WP_038272719.1;transl_table=11 NZ_CP087680.1 RefSeq gene 674843 675154 . - . ID=gene-LPH41_RS03070;Name=LPH41_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03070;old_locus_tag=LPH41_03070 NZ_CP087680.1 GeneMarkS-2+ CDS 674843 675154 . - 0 ID=cds-WP_038272721.1;Parent=gene-LPH41_RS03070;Dbxref=Genbank:WP_038272721.1;Name=WP_038272721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03070;product=hypothetical protein;protein_id=WP_038272721.1;transl_table=11 NZ_CP087680.1 RefSeq gene 675278 675748 . - . ID=gene-LPH41_RS03075;Name=LPH41_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03075;old_locus_tag=LPH41_03075 NZ_CP087680.1 Protein Homology CDS 675278 675748 . - 0 ID=cds-WP_051482379.1;Parent=gene-LPH41_RS03075;Dbxref=Genbank:WP_051482379.1;Name=WP_051482379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015211.2;locus_tag=LPH41_RS03075;product=terminase family protein;protein_id=WP_051482379.1;transl_table=11 NZ_CP087680.1 RefSeq gene 675757 675981 . - . ID=gene-LPH41_RS03080;Name=LPH41_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03080;old_locus_tag=LPH41_03080 NZ_CP087680.1 GeneMarkS-2+ CDS 675757 675981 . - 0 ID=cds-WP_038272724.1;Parent=gene-LPH41_RS03080;Dbxref=Genbank:WP_038272724.1;Name=WP_038272724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03080;product=DUF5681 domain-containing protein;protein_id=WP_038272724.1;transl_table=11 NZ_CP087680.1 RefSeq gene 675981 676718 . - . ID=gene-LPH41_RS03085;Name=LPH41_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03085;old_locus_tag=LPH41_03085 NZ_CP087680.1 Protein Homology CDS 675981 676718 . - 0 ID=cds-WP_038272739.1;Parent=gene-LPH41_RS03085;Dbxref=Genbank:WP_038272739.1;Name=WP_038272739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085024.1;locus_tag=LPH41_RS03085;product=site-specific DNA-methyltransferase;protein_id=WP_038272739.1;transl_table=11 NZ_CP087680.1 RefSeq gene 676729 676944 . - . ID=gene-LPH41_RS03090;Name=LPH41_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03090;old_locus_tag=LPH41_03090 NZ_CP087680.1 Protein Homology CDS 676729 676944 . - 0 ID=cds-WP_038272727.1;Parent=gene-LPH41_RS03090;Dbxref=Genbank:WP_038272727.1;Name=WP_038272727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085111.1;locus_tag=LPH41_RS03090;product=hypothetical protein;protein_id=WP_038272727.1;transl_table=11 NZ_CP087680.1 RefSeq gene 676946 677407 . - . ID=gene-LPH41_RS03095;Name=LPH41_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03095;old_locus_tag=LPH41_03095 NZ_CP087680.1 Protein Homology CDS 676946 677407 . - 0 ID=cds-WP_038272730.1;Parent=gene-LPH41_RS03095;Dbxref=Genbank:WP_038272730.1;Name=WP_038272730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086887.1;locus_tag=LPH41_RS03095;product=hypothetical protein;protein_id=WP_038272730.1;transl_table=11 NZ_CP087680.1 RefSeq gene 677397 677723 . - . ID=gene-LPH41_RS03100;Name=LPH41_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03100;old_locus_tag=LPH41_03100 NZ_CP087680.1 Protein Homology CDS 677397 677723 . - 0 ID=cds-WP_038272732.1;Parent=gene-LPH41_RS03100;Dbxref=Genbank:WP_038272732.1;Name=WP_038272732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852373.1;locus_tag=LPH41_RS03100;product=phage holin family protein;protein_id=WP_038272732.1;transl_table=11 NZ_CP087680.1 RefSeq gene 677716 678237 . - . ID=gene-LPH41_RS03105;Name=LPH41_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03105;old_locus_tag=LPH41_03105 NZ_CP087680.1 Protein Homology CDS 677716 678237 . - 0 ID=cds-WP_114867080.1;Parent=gene-LPH41_RS03105;Dbxref=Genbank:WP_114867080.1;Name=WP_114867080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853008.1;locus_tag=LPH41_RS03105;product=lysozyme;protein_id=WP_114867080.1;transl_table=11 NZ_CP087680.1 RefSeq gene 678458 678769 . - . ID=gene-LPH41_RS03110;Name=LPH41_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03110;old_locus_tag=LPH41_03110 NZ_CP087680.1 Protein Homology CDS 678458 678769 . - 0 ID=cds-WP_038273331.1;Parent=gene-LPH41_RS03110;Dbxref=Genbank:WP_038273331.1;Name=WP_038273331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084245.1;locus_tag=LPH41_RS03110;product=BrnA antitoxin family protein;protein_id=WP_038273331.1;transl_table=11 NZ_CP087680.1 RefSeq gene 678735 679013 . - . ID=gene-LPH41_RS03115;Name=LPH41_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03115;old_locus_tag=LPH41_03115 NZ_CP087680.1 Protein Homology CDS 678735 679013 . - 0 ID=cds-WP_038273333.1;Parent=gene-LPH41_RS03115;Dbxref=Genbank:WP_038273333.1;Name=WP_038273333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083921.1;locus_tag=LPH41_RS03115;product=BrnT family toxin;protein_id=WP_038273333.1;transl_table=11 NZ_CP087680.1 RefSeq gene 679074 679772 . - . ID=gene-LPH41_RS03120;Name=LPH41_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03120;old_locus_tag=LPH41_03120 NZ_CP087680.1 Protein Homology CDS 679074 679772 . - 0 ID=cds-WP_114867079.1;Parent=gene-LPH41_RS03120;Dbxref=Genbank:WP_114867079.1;Name=WP_114867079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852371.1;locus_tag=LPH41_RS03120;product=hypothetical protein;protein_id=WP_114867079.1;transl_table=11 NZ_CP087680.1 RefSeq gene 679729 680922 . + . ID=gene-LPH41_RS03125;Name=LPH41_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03125;old_locus_tag=LPH41_03125 NZ_CP087680.1 GeneMarkS-2+ CDS 679729 680922 . + 0 ID=cds-WP_230428169.1;Parent=gene-LPH41_RS03125;Dbxref=Genbank:WP_230428169.1;Name=WP_230428169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03125;product=hypothetical protein;protein_id=WP_230428169.1;transl_table=11 NZ_CP087680.1 RefSeq gene 680926 681198 . + . ID=gene-LPH41_RS03130;Name=LPH41_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03130;old_locus_tag=LPH41_03130 NZ_CP087680.1 Protein Homology CDS 680926 681198 . + 0 ID=cds-WP_114867070.1-2;Parent=gene-LPH41_RS03130;Dbxref=Genbank:WP_114867070.1;Name=WP_114867070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382732.1;locus_tag=LPH41_RS03130;product=VRR-NUC domain-containing protein;protein_id=WP_114867070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 681200 681484 . - . ID=gene-LPH41_RS03135;Name=LPH41_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03135;old_locus_tag=LPH41_03135 NZ_CP087680.1 Protein Homology CDS 681200 681484 . - 0 ID=cds-WP_114867078.1;Parent=gene-LPH41_RS03135;Dbxref=Genbank:WP_114867078.1;Name=WP_114867078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851619.1;locus_tag=LPH41_RS03135;product=DUF1640 domain-containing protein;protein_id=WP_114867078.1;transl_table=11 NZ_CP087680.1 RefSeq gene 681560 682945 . + . ID=gene-LPH41_RS03140;Name=LPH41_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03140;old_locus_tag=LPH41_03140 NZ_CP087680.1 Protein Homology CDS 681560 682945 . + 0 ID=cds-WP_114867068.1;Parent=gene-LPH41_RS03140;Dbxref=Genbank:WP_114867068.1;Name=WP_114867068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085030.1;locus_tag=LPH41_RS03140;product=DEAD/DEAH box helicase;protein_id=WP_114867068.1;transl_table=11 NZ_CP087680.1 RefSeq gene 682942 683478 . + . ID=gene-LPH41_RS03145;Name=LPH41_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03145;old_locus_tag=LPH41_03145 NZ_CP087680.1 Protein Homology CDS 682942 683478 . + 0 ID=cds-WP_038273354.1;Parent=gene-LPH41_RS03145;Dbxref=Genbank:WP_038273354.1;Name=WP_038273354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH41_RS03145;product=pilin;protein_id=WP_038273354.1;transl_table=11 NZ_CP087680.1 RefSeq gene 683533 683781 . + . ID=gene-LPH41_RS03150;Name=LPH41_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03150;old_locus_tag=LPH41_03150 NZ_CP087680.1 Protein Homology CDS 683533 683781 . + 0 ID=cds-WP_081755423.1;Parent=gene-LPH41_RS03150;Dbxref=Genbank:WP_081755423.1;Name=WP_081755423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852417.1;locus_tag=LPH41_RS03150;product=DUF4224 domain-containing protein;protein_id=WP_081755423.1;transl_table=11 NZ_CP087680.1 RefSeq gene 683781 684800 . + . ID=gene-LPH41_RS03155;Name=LPH41_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03155;old_locus_tag=LPH41_03155 NZ_CP087680.1 Protein Homology CDS 683781 684800 . + 0 ID=cds-WP_038270998.1;Parent=gene-LPH41_RS03155;Dbxref=Genbank:WP_038270998.1;Name=WP_038270998.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852569.1;locus_tag=LPH41_RS03155;product=tyrosine-type recombinase/integrase;protein_id=WP_038270998.1;transl_table=11 NZ_CP087680.1 RefSeq gene 685536 686939 . - . ID=gene-LPH41_RS03160;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LPH41_RS03160;old_locus_tag=LPH41_03160 NZ_CP087680.1 Protein Homology CDS 685536 686939 . - 0 ID=cds-WP_038270996.1;Parent=gene-LPH41_RS03160;Dbxref=Genbank:WP_038270996.1;Name=WP_038270996.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893717.1;locus_tag=LPH41_RS03160;product=cardiolipin synthase;protein_id=WP_038270996.1;transl_table=11 NZ_CP087680.1 RefSeq gene 687125 687292 . - . ID=gene-LPH41_RS03165;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LPH41_RS03165;old_locus_tag=LPH41_03165 NZ_CP087680.1 Protein Homology CDS 687125 687292 . - 0 ID=cds-WP_171898073.1;Parent=gene-LPH41_RS03165;Dbxref=Genbank:WP_171898073.1;Name=WP_171898073.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051801.1;locus_tag=LPH41_RS03165;product=50S ribosomal protein L33;protein_id=WP_171898073.1;transl_table=11 NZ_CP087680.1 RefSeq gene 687303 687539 . - . ID=gene-LPH41_RS03170;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LPH41_RS03170;old_locus_tag=LPH41_03170 NZ_CP087680.1 Protein Homology CDS 687303 687539 . - 0 ID=cds-WP_038270994.1;Parent=gene-LPH41_RS03170;Dbxref=Genbank:WP_038270994.1;Name=WP_038270994.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185625.1;locus_tag=LPH41_RS03170;product=50S ribosomal protein L28;protein_id=WP_038270994.1;transl_table=11 NZ_CP087680.1 RefSeq gene 689298 689855 . + . ID=gene-LPH41_RS03175;Name=LPH41_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03175;old_locus_tag=LPH41_03175 NZ_CP087680.1 Protein Homology CDS 689298 689855 . + 0 ID=cds-WP_038270993.1;Parent=gene-LPH41_RS03175;Dbxref=Genbank:WP_038270993.1;Name=WP_038270993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086564.1;locus_tag=LPH41_RS03175;product=DUF1415 domain-containing protein;protein_id=WP_038270993.1;transl_table=11 NZ_CP087680.1 RefSeq gene 690708 691388 . - . ID=gene-LPH41_RS03180;Name=LPH41_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03180;old_locus_tag=LPH41_03180 NZ_CP087680.1 Protein Homology CDS 690708 691388 . - 0 ID=cds-WP_038270991.1;Parent=gene-LPH41_RS03180;Dbxref=Genbank:WP_038270991.1;Name=WP_038270991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893711.1;locus_tag=LPH41_RS03180;product=HAD family phosphatase;protein_id=WP_038270991.1;transl_table=11 NZ_CP087680.1 RefSeq gene 691385 692095 . - . ID=gene-LPH41_RS03185;Name=LPH41_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03185;old_locus_tag=LPH41_03185 NZ_CP087680.1 Protein Homology CDS 691385 692095 . - 0 ID=cds-WP_038270990.1;Parent=gene-LPH41_RS03185;Dbxref=Genbank:WP_038270990.1;Name=WP_038270990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852452.1;locus_tag=LPH41_RS03185;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_038270990.1;transl_table=11 NZ_CP087680.1 RefSeq gene 692414 692629 . - . ID=gene-LPH41_RS03190;Name=LPH41_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03190;old_locus_tag=LPH41_03190 NZ_CP087680.1 GeneMarkS-2+ CDS 692414 692629 . - 0 ID=cds-WP_152536602.1;Parent=gene-LPH41_RS03190;Dbxref=Genbank:WP_152536602.1;Name=WP_152536602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03190;product=hypothetical protein;protein_id=WP_152536602.1;transl_table=11 NZ_CP087680.1 RefSeq gene 692712 692855 . - . ID=gene-LPH41_RS03195;Name=LPH41_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03195;old_locus_tag=LPH41_03195 NZ_CP087680.1 GeneMarkS-2+ CDS 692712 692855 . - 0 ID=cds-WP_230439319.1;Parent=gene-LPH41_RS03195;Dbxref=Genbank:WP_230439319.1;Name=WP_230439319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03195;product=hypothetical protein;protein_id=WP_230439319.1;transl_table=11 NZ_CP087680.1 RefSeq gene 693384 693569 . + . ID=gene-LPH41_RS03200;Name=LPH41_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03200;old_locus_tag=LPH41_03200 NZ_CP087680.1 GeneMarkS-2+ CDS 693384 693569 . + 0 ID=cds-WP_038270988.1;Parent=gene-LPH41_RS03200;Dbxref=Genbank:WP_038270988.1;Name=WP_038270988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03200;product=hypothetical protein;protein_id=WP_038270988.1;transl_table=11 NZ_CP087680.1 RefSeq gene 693602 693928 . - . ID=gene-LPH41_RS03205;Name=LPH41_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03205;old_locus_tag=LPH41_03205 NZ_CP087680.1 Protein Homology CDS 693602 693928 . - 0 ID=cds-WP_038270987.1;Parent=gene-LPH41_RS03205;Dbxref=Genbank:WP_038270987.1;Name=WP_038270987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156291.1;locus_tag=LPH41_RS03205;product=thioredoxin family protein;protein_id=WP_038270987.1;transl_table=11 NZ_CP087680.1 RefSeq gene 693900 694382 . - . ID=gene-LPH41_RS03210;Name=LPH41_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03210;old_locus_tag=LPH41_03210 NZ_CP087680.1 Protein Homology CDS 693900 694382 . - 0 ID=cds-WP_038270986.1;Parent=gene-LPH41_RS03210;Dbxref=Genbank:WP_038270986.1;Name=WP_038270986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852453.1;locus_tag=LPH41_RS03210;product=flavodoxin;protein_id=WP_038270986.1;transl_table=11 NZ_CP087680.1 RefSeq gene 694394 695434 . - . ID=gene-LPH41_RS03215;Name=LPH41_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03215;old_locus_tag=LPH41_03215 NZ_CP087680.1 Protein Homology CDS 694394 695434 . - 0 ID=cds-WP_038270985.1;Parent=gene-LPH41_RS03215;Dbxref=Genbank:WP_038270985.1;Name=WP_038270985.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356462.1;locus_tag=LPH41_RS03215;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_038270985.1;transl_table=11 NZ_CP087680.1 RefSeq gene 695511 697982 . - . ID=gene-LPH41_RS03220;Name=LPH41_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03220;old_locus_tag=LPH41_03220 NZ_CP087680.1 Protein Homology CDS 695511 697982 . - 0 ID=cds-WP_038270984.1;Parent=gene-LPH41_RS03220;Dbxref=Genbank:WP_038270984.1;Name=WP_038270984.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893707.1;locus_tag=LPH41_RS03220;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_038270984.1;transl_table=11 NZ_CP087680.1 RefSeq gene 700692 701726 . - . ID=gene-LPH41_RS03225;Name=LPH41_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03225;old_locus_tag=LPH41_03225 NZ_CP087680.1 Protein Homology CDS 700692 701726 . - 0 ID=cds-WP_038270983.1;Parent=gene-LPH41_RS03225;Dbxref=Genbank:WP_038270983.1;Name=WP_038270983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086557.1;locus_tag=LPH41_RS03225;product=DUF475 domain-containing protein;protein_id=WP_038270983.1;transl_table=11 NZ_CP087680.1 RefSeq gene 702507 704474 . - . ID=gene-LPH41_RS03230;Name=LPH41_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03230;old_locus_tag=LPH41_03230 NZ_CP087680.1 Protein Homology CDS 702507 704474 . - 0 ID=cds-WP_230439320.1;Parent=gene-LPH41_RS03230;Dbxref=Genbank:WP_230439320.1;Name=WP_230439320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920425.1;locus_tag=LPH41_RS03230;product=peptidylprolyl isomerase;protein_id=WP_230439320.1;transl_table=11 NZ_CP087680.1 RefSeq gene 704832 704908 . - . ID=gene-LPH41_RS03235;Name=LPH41_RS03235;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS03235;old_locus_tag=LPH41_03235 NZ_CP087680.1 tRNAscan-SE tRNA 704832 704908 . - . ID=rna-LPH41_RS03235;Parent=gene-LPH41_RS03235;anticodon=(pos:complement(704872..704874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03235;product=tRNA-Asp NZ_CP087680.1 tRNAscan-SE exon 704832 704908 . - . ID=exon-LPH41_RS03235-1;Parent=rna-LPH41_RS03235;anticodon=(pos:complement(704872..704874));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03235;product=tRNA-Asp NZ_CP087680.1 RefSeq gene 704939 705013 . - . ID=gene-LPH41_RS03240;Name=LPH41_RS03240;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS03240;old_locus_tag=LPH41_03240 NZ_CP087680.1 tRNAscan-SE tRNA 704939 705013 . - . ID=rna-LPH41_RS03240;Parent=gene-LPH41_RS03240;anticodon=(pos:complement(704979..704981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03240;product=tRNA-Val NZ_CP087680.1 tRNAscan-SE exon 704939 705013 . - . ID=exon-LPH41_RS03240-1;Parent=rna-LPH41_RS03240;anticodon=(pos:complement(704979..704981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03240;product=tRNA-Val NZ_CP087680.1 RefSeq gene 705015 705299 . - . ID=gene-LPH41_RS03245;Name=LPH41_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03245;old_locus_tag=LPH41_03245 NZ_CP087680.1 Protein Homology CDS 705015 705299 . - 0 ID=cds-WP_038270979.1;Parent=gene-LPH41_RS03245;Dbxref=Genbank:WP_038270979.1;Name=WP_038270979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904732.1;locus_tag=LPH41_RS03245;product=HU family DNA-binding protein;protein_id=WP_038270979.1;transl_table=11 NZ_CP087680.1 RefSeq gene 705520 707988 . - . ID=gene-LPH41_RS03250;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LPH41_RS03250;old_locus_tag=LPH41_03250 NZ_CP087680.1 Protein Homology CDS 705520 707988 . - 0 ID=cds-WP_038270977.1;Parent=gene-LPH41_RS03250;Dbxref=Genbank:WP_038270977.1;Name=WP_038270977.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852269.1;locus_tag=LPH41_RS03250;product=endopeptidase La;protein_id=WP_038270977.1;transl_table=11 NZ_CP087680.1 RefSeq gene 708138 709418 . - . ID=gene-LPH41_RS03255;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LPH41_RS03255;old_locus_tag=LPH41_03255 NZ_CP087680.1 Protein Homology CDS 708138 709418 . - 0 ID=cds-WP_038270976.1;Parent=gene-LPH41_RS03255;Dbxref=Genbank:WP_038270976.1;Name=WP_038270976.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451747.1;locus_tag=LPH41_RS03255;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_038270976.1;transl_table=11 NZ_CP087680.1 RefSeq gene 709539 710165 . - . ID=gene-LPH41_RS03260;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LPH41_RS03260;old_locus_tag=LPH41_03260 NZ_CP087680.1 Protein Homology CDS 709539 710165 . - 0 ID=cds-WP_038270975.1;Parent=gene-LPH41_RS03260;Dbxref=Genbank:WP_038270975.1;Name=WP_038270975.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806026.1;locus_tag=LPH41_RS03260;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_038270975.1;transl_table=11 NZ_CP087680.1 RefSeq gene 710312 711607 . - . ID=gene-LPH41_RS03265;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LPH41_RS03265;old_locus_tag=LPH41_03265 NZ_CP087680.1 Protein Homology CDS 710312 711607 . - 0 ID=cds-WP_038270973.1;Parent=gene-LPH41_RS03265;Dbxref=Genbank:WP_038270973.1;Name=WP_038270973.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852440.1;locus_tag=LPH41_RS03265;product=trigger factor;protein_id=WP_038270973.1;transl_table=11 NZ_CP087680.1 RefSeq gene 712014 712097 . + . ID=gene-LPH41_RS03270;Name=LPH41_RS03270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS03270;old_locus_tag=LPH41_03270 NZ_CP087680.1 tRNAscan-SE tRNA 712014 712097 . + . ID=rna-LPH41_RS03270;Parent=gene-LPH41_RS03270;anticodon=(pos:712048..712050);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03270;product=tRNA-Leu NZ_CP087680.1 tRNAscan-SE exon 712014 712097 . + . ID=exon-LPH41_RS03270-1;Parent=rna-LPH41_RS03270;anticodon=(pos:712048..712050);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03270;product=tRNA-Leu NZ_CP087680.1 RefSeq gene 713502 713963 . + . ID=gene-LPH41_RS03275;Name=LPH41_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03275;old_locus_tag=LPH41_03275 NZ_CP087680.1 Protein Homology CDS 713502 713963 . + 0 ID=cds-WP_038270971.1;Parent=gene-LPH41_RS03275;Dbxref=Genbank:WP_038270971.1;Name=WP_038270971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852439.1;locus_tag=LPH41_RS03275;product=hypothetical protein;protein_id=WP_038270971.1;transl_table=11 NZ_CP087680.1 RefSeq gene 715995 717287 . - . ID=gene-LPH41_RS03280;Name=LPH41_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03280;old_locus_tag=LPH41_03280 NZ_CP087680.1 Protein Homology CDS 715995 717287 . - 0 ID=cds-WP_038270969.1;Parent=gene-LPH41_RS03280;Dbxref=Genbank:WP_038270969.1;Name=WP_038270969.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852438.1;locus_tag=LPH41_RS03280;product=nucleotide sugar dehydrogenase;protein_id=WP_038270969.1;transl_table=11 NZ_CP087680.1 RefSeq gene 717423 717509 . + . ID=gene-LPH41_RS03285;Name=LPH41_RS03285;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS03285;old_locus_tag=LPH41_03285 NZ_CP087680.1 tRNAscan-SE tRNA 717423 717509 . + . ID=rna-LPH41_RS03285;Parent=gene-LPH41_RS03285;anticodon=(pos:717457..717459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03285;product=tRNA-Leu NZ_CP087680.1 tRNAscan-SE exon 717423 717509 . + . ID=exon-LPH41_RS03285-1;Parent=rna-LPH41_RS03285;anticodon=(pos:717457..717459);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03285;product=tRNA-Leu NZ_CP087680.1 RefSeq pseudogene 718194 719243 . - . ID=gene-LPH41_RS03290;Name=LPH41_RS03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS03290;old_locus_tag=LPH41_03290;pseudo=true NZ_CP087680.1 Protein Homology CDS 718194 719243 . - 0 ID=cds-LPH41_RS03290;Parent=gene-LPH41_RS03290;Note=internal stop;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097653.1;locus_tag=LPH41_RS03290;product=lipase secretion chaperone;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 719244 720185 . - . ID=gene-LPH41_RS03295;Name=LPH41_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03295;old_locus_tag=LPH41_03295 NZ_CP087680.1 Protein Homology CDS 719244 720185 . - 0 ID=cds-WP_230428167.1;Parent=gene-LPH41_RS03295;Dbxref=Genbank:WP_230428167.1;Name=WP_230428167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=LPH41_RS03295;product=triacylglycerol lipase;protein_id=WP_230428167.1;transl_table=11 NZ_CP087680.1 RefSeq gene 721922 723442 . - . ID=gene-LPH41_RS03300;Name=LPH41_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03300;old_locus_tag=LPH41_03300 NZ_CP087680.1 Protein Homology CDS 721922 723442 . - 0 ID=cds-WP_038270967.1;Parent=gene-LPH41_RS03300;Dbxref=Genbank:WP_038270967.1;Name=WP_038270967.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852434.1;locus_tag=LPH41_RS03300;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_038270967.1;transl_table=11 NZ_CP087680.1 RefSeq gene 723453 723713 . - . ID=gene-LPH41_RS03305;Name=LPH41_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03305;old_locus_tag=LPH41_03305 NZ_CP087680.1 Protein Homology CDS 723453 723713 . - 0 ID=cds-WP_038270966.1;Parent=gene-LPH41_RS03305;Dbxref=Genbank:WP_038270966.1;Name=WP_038270966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086547.1;locus_tag=LPH41_RS03305;product=accessory factor UbiK family protein;protein_id=WP_038270966.1;transl_table=11 NZ_CP087680.1 RefSeq gene 725166 725549 . - . ID=gene-LPH41_RS03310;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LPH41_RS03310;old_locus_tag=LPH41_03310 NZ_CP087680.1 Protein Homology CDS 725166 725549 . - 0 ID=cds-WP_038270964.1;Parent=gene-LPH41_RS03310;Dbxref=Genbank:WP_038270964.1;Name=WP_038270964.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1;locus_tag=LPH41_RS03310;product=50S ribosomal protein L17;protein_id=WP_038270964.1;transl_table=11 NZ_CP087680.1 RefSeq gene 725775 726773 . - . ID=gene-LPH41_RS03315;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LPH41_RS03315;old_locus_tag=LPH41_03315 NZ_CP087680.1 Protein Homology CDS 725775 726773 . - 0 ID=cds-WP_038270963.1;Parent=gene-LPH41_RS03315;Dbxref=Genbank:WP_038270963.1;Name=WP_038270963.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852431.1;locus_tag=LPH41_RS03315;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_038270963.1;transl_table=11 NZ_CP087680.1 RefSeq gene 726828 727454 . - . ID=gene-LPH41_RS03320;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LPH41_RS03320;old_locus_tag=LPH41_03320 NZ_CP087680.1 Protein Homology CDS 726828 727454 . - 0 ID=cds-WP_038270961.1;Parent=gene-LPH41_RS03320;Dbxref=Genbank:WP_038270961.1;Name=WP_038270961.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145446.1;locus_tag=LPH41_RS03320;product=30S ribosomal protein S4;protein_id=WP_038270961.1;transl_table=11 NZ_CP087680.1 RefSeq gene 727469 727861 . - . ID=gene-LPH41_RS03325;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LPH41_RS03325;old_locus_tag=LPH41_03325 NZ_CP087680.1 Protein Homology CDS 727469 727861 . - 0 ID=cds-WP_038270959.1;Parent=gene-LPH41_RS03325;Dbxref=Genbank:WP_038270959.1;Name=WP_038270959.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090135.1;locus_tag=LPH41_RS03325;product=30S ribosomal protein S11;protein_id=WP_038270959.1;transl_table=11 NZ_CP087680.1 RefSeq gene 727875 728231 . - . ID=gene-LPH41_RS03330;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LPH41_RS03330;old_locus_tag=LPH41_03330 NZ_CP087680.1 Protein Homology CDS 727875 728231 . - 0 ID=cds-WP_038270958.1;Parent=gene-LPH41_RS03330;Dbxref=Genbank:WP_038270958.1;Name=WP_038270958.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=LPH41_RS03330;product=30S ribosomal protein S13;protein_id=WP_038270958.1;transl_table=11 NZ_CP087680.1 RefSeq gene 728537 729910 . - . ID=gene-LPH41_RS03335;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LPH41_RS03335;old_locus_tag=LPH41_03335 NZ_CP087680.1 Protein Homology CDS 728537 729910 . - 0 ID=cds-WP_038271017.1;Parent=gene-LPH41_RS03335;Dbxref=Genbank:WP_038271017.1;Name=WP_038271017.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852429.1;locus_tag=LPH41_RS03335;product=preprotein translocase subunit SecY;protein_id=WP_038271017.1;transl_table=11 NZ_CP087680.1 RefSeq gene 729918 730361 . - . ID=gene-LPH41_RS03340;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LPH41_RS03340;old_locus_tag=LPH41_03340 NZ_CP087680.1 Protein Homology CDS 729918 730361 . - 0 ID=cds-WP_069636208.1;Parent=gene-LPH41_RS03340;Dbxref=Genbank:WP_069636208.1;Name=WP_069636208.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486676.1;locus_tag=LPH41_RS03340;product=50S ribosomal protein L15;protein_id=WP_069636208.1;transl_table=11 NZ_CP087680.1 RefSeq gene 730368 730559 . - . ID=gene-LPH41_RS03345;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LPH41_RS03345;old_locus_tag=LPH41_03345 NZ_CP087680.1 Protein Homology CDS 730368 730559 . - 0 ID=cds-WP_038270956.1;Parent=gene-LPH41_RS03345;Dbxref=Genbank:WP_038270956.1;Name=WP_038270956.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486678.1;locus_tag=LPH41_RS03345;product=50S ribosomal protein L30;protein_id=WP_038270956.1;transl_table=11 NZ_CP087680.1 RefSeq gene 730552 731088 . - . ID=gene-LPH41_RS03350;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LPH41_RS03350;old_locus_tag=LPH41_03350 NZ_CP087680.1 Protein Homology CDS 730552 731088 . - 0 ID=cds-WP_051482296.1;Parent=gene-LPH41_RS03350;Dbxref=Genbank:WP_051482296.1;Name=WP_051482296.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090125.1;locus_tag=LPH41_RS03350;product=30S ribosomal protein S5;protein_id=WP_051482296.1;transl_table=11 NZ_CP087680.1 RefSeq gene 731266 731625 . - . ID=gene-LPH41_RS03355;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LPH41_RS03355;old_locus_tag=LPH41_03355 NZ_CP087680.1 Protein Homology CDS 731266 731625 . - 0 ID=cds-WP_038270955.1;Parent=gene-LPH41_RS03355;Dbxref=Genbank:WP_038270955.1;Name=WP_038270955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811659.1;locus_tag=LPH41_RS03355;product=50S ribosomal protein L18;protein_id=WP_038270955.1;transl_table=11 NZ_CP087680.1 RefSeq gene 731683 732210 . - . ID=gene-LPH41_RS03360;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LPH41_RS03360;old_locus_tag=LPH41_03360 NZ_CP087680.1 Protein Homology CDS 731683 732210 . - 0 ID=cds-WP_038270954.1;Parent=gene-LPH41_RS03360;Dbxref=Genbank:WP_038270954.1;Name=WP_038270954.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450642.1;locus_tag=LPH41_RS03360;product=50S ribosomal protein L6;protein_id=WP_038270954.1;transl_table=11 NZ_CP087680.1 RefSeq gene 732230 732628 . - . ID=gene-LPH41_RS03365;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LPH41_RS03365;old_locus_tag=LPH41_03365 NZ_CP087680.1 Protein Homology CDS 732230 732628 . - 0 ID=cds-WP_038270953.1;Parent=gene-LPH41_RS03365;Dbxref=Genbank:WP_038270953.1;Name=WP_038270953.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932726.1;locus_tag=LPH41_RS03365;product=30S ribosomal protein S8;protein_id=WP_038270953.1;transl_table=11 NZ_CP087680.1 RefSeq gene 732776 733081 . - . ID=gene-LPH41_RS03370;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LPH41_RS03370;old_locus_tag=LPH41_03370 NZ_CP087680.1 Protein Homology CDS 732776 733081 . - 0 ID=cds-WP_081755425.1;Parent=gene-LPH41_RS03370;Dbxref=Genbank:WP_081755425.1;Name=WP_081755425.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917137.1;locus_tag=LPH41_RS03370;product=30S ribosomal protein S14;protein_id=WP_081755425.1;transl_table=11 NZ_CP087680.1 RefSeq gene 733097 733636 . - . ID=gene-LPH41_RS03375;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LPH41_RS03375;old_locus_tag=LPH41_03375 NZ_CP087680.1 Protein Homology CDS 733097 733636 . - 0 ID=cds-WP_038270952.1;Parent=gene-LPH41_RS03375;Dbxref=Genbank:WP_038270952.1;Name=WP_038270952.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852426.1;locus_tag=LPH41_RS03375;product=50S ribosomal protein L5;protein_id=WP_038270952.1;transl_table=11 NZ_CP087680.1 RefSeq gene 733648 733965 . - . ID=gene-LPH41_RS03380;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LPH41_RS03380;old_locus_tag=LPH41_03380 NZ_CP087680.1 Protein Homology CDS 733648 733965 . - 0 ID=cds-WP_038271012.1;Parent=gene-LPH41_RS03380;Dbxref=Genbank:WP_038271012.1;Name=WP_038271012.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260025.1;locus_tag=LPH41_RS03380;product=50S ribosomal protein L24;protein_id=WP_038271012.1;transl_table=11 NZ_CP087680.1 RefSeq gene 733981 734349 . - . ID=gene-LPH41_RS03385;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LPH41_RS03385;old_locus_tag=LPH41_03385 NZ_CP087680.1 Protein Homology CDS 733981 734349 . - 0 ID=cds-WP_038270950.1;Parent=gene-LPH41_RS03385;Dbxref=Genbank:WP_038270950.1;Name=WP_038270950.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=LPH41_RS03385;product=50S ribosomal protein L14;protein_id=WP_038270950.1;transl_table=11 NZ_CP087680.1 RefSeq gene 734373 734639 . - . ID=gene-LPH41_RS03390;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LPH41_RS03390;old_locus_tag=LPH41_03390 NZ_CP087680.1 Protein Homology CDS 734373 734639 . - 0 ID=cds-WP_038270948.1;Parent=gene-LPH41_RS03390;Dbxref=Genbank:WP_038270948.1;Name=WP_038270948.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsQ;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993374.1;locus_tag=LPH41_RS03390;product=30S ribosomal protein S17;protein_id=WP_038270948.1;transl_table=11 NZ_CP087680.1 RefSeq gene 734639 734836 . - . ID=gene-LPH41_RS03395;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LPH41_RS03395;old_locus_tag=LPH41_03395 NZ_CP087680.1 Protein Homology CDS 734639 734836 . - 0 ID=cds-WP_038270947.1;Parent=gene-LPH41_RS03395;Dbxref=Genbank:WP_038270947.1;Name=WP_038270947.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090108.1;locus_tag=LPH41_RS03395;product=50S ribosomal protein L29;protein_id=WP_038270947.1;transl_table=11 NZ_CP087680.1 RefSeq gene 734836 735249 . - . ID=gene-LPH41_RS03400;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LPH41_RS03400;old_locus_tag=LPH41_03400 NZ_CP087680.1 Protein Homology CDS 734836 735249 . - 0 ID=cds-WP_038270946.1;Parent=gene-LPH41_RS03400;Dbxref=Genbank:WP_038270946.1;Name=WP_038270946.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479591.1;locus_tag=LPH41_RS03400;product=50S ribosomal protein L16;protein_id=WP_038270946.1;transl_table=11 NZ_CP087680.1 RefSeq gene 735255 735974 . - . ID=gene-LPH41_RS03405;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LPH41_RS03405;old_locus_tag=LPH41_03405 NZ_CP087680.1 Protein Homology CDS 735255 735974 . - 0 ID=cds-WP_038270945.1;Parent=gene-LPH41_RS03405;Dbxref=Genbank:WP_038270945.1;Name=WP_038270945.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086530.1;locus_tag=LPH41_RS03405;product=30S ribosomal protein S3;protein_id=WP_038270945.1;transl_table=11 NZ_CP087680.1 RefSeq gene 735993 736328 . - . ID=gene-LPH41_RS03410;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LPH41_RS03410;old_locus_tag=LPH41_03410 NZ_CP087680.1 Protein Homology CDS 735993 736328 . - 0 ID=cds-WP_038270944.1;Parent=gene-LPH41_RS03410;Dbxref=Genbank:WP_038270944.1;Name=WP_038270944.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486710.1;locus_tag=LPH41_RS03410;product=50S ribosomal protein L22;protein_id=WP_038270944.1;transl_table=11 NZ_CP087680.1 RefSeq gene 736341 736610 . - . ID=gene-LPH41_RS03415;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LPH41_RS03415;old_locus_tag=LPH41_03415 NZ_CP087680.1 Protein Homology CDS 736341 736610 . - 0 ID=cds-WP_038270943.1;Parent=gene-LPH41_RS03415;Dbxref=Genbank:WP_038270943.1;Name=WP_038270943.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086525.1;locus_tag=LPH41_RS03415;product=30S ribosomal protein S19;protein_id=WP_038270943.1;transl_table=11 NZ_CP087680.1 RefSeq gene 736617 737444 . - . ID=gene-LPH41_RS03420;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LPH41_RS03420;old_locus_tag=LPH41_03420 NZ_CP087680.1 Protein Homology CDS 736617 737444 . - 0 ID=cds-WP_038270942.1;Parent=gene-LPH41_RS03420;Dbxref=Genbank:WP_038270942.1;Name=WP_038270942.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607340.1;locus_tag=LPH41_RS03420;product=50S ribosomal protein L2;protein_id=WP_038270942.1;transl_table=11 NZ_CP087680.1 RefSeq gene 737455 737757 . - . ID=gene-LPH41_RS03425;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LPH41_RS03425;old_locus_tag=LPH41_03425 NZ_CP087680.1 Protein Homology CDS 737455 737757 . - 0 ID=cds-WP_081755424.1;Parent=gene-LPH41_RS03425;Dbxref=Genbank:WP_081755424.1;Name=WP_081755424.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090096.1;locus_tag=LPH41_RS03425;product=50S ribosomal protein L23;protein_id=WP_081755424.1;transl_table=11 NZ_CP087680.1 RefSeq gene 737754 738359 . - . ID=gene-LPH41_RS03430;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LPH41_RS03430;old_locus_tag=LPH41_03430 NZ_CP087680.1 Protein Homology CDS 737754 738359 . - 0 ID=cds-WP_038270940.1;Parent=gene-LPH41_RS03430;Dbxref=Genbank:WP_038270940.1;Name=WP_038270940.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371054.1;locus_tag=LPH41_RS03430;product=50S ribosomal protein L4;protein_id=WP_038270940.1;transl_table=11 NZ_CP087680.1 RefSeq gene 738371 739018 . - . ID=gene-LPH41_RS03435;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LPH41_RS03435;old_locus_tag=LPH41_03435 NZ_CP087680.1 Protein Homology CDS 738371 739018 . - 0 ID=cds-WP_038270939.1;Parent=gene-LPH41_RS03435;Dbxref=Genbank:WP_038270939.1;Name=WP_038270939.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337684.1;locus_tag=LPH41_RS03435;product=50S ribosomal protein L3;protein_id=WP_038270939.1;transl_table=11 NZ_CP087680.1 RefSeq gene 739030 739341 . - . ID=gene-LPH41_RS03440;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LPH41_RS03440;old_locus_tag=LPH41_03440 NZ_CP087680.1 Protein Homology CDS 739030 739341 . - 0 ID=cds-WP_038270938.1;Parent=gene-LPH41_RS03440;Dbxref=Genbank:WP_038270938.1;Name=WP_038270938.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160477.1;locus_tag=LPH41_RS03440;product=30S ribosomal protein S10;protein_id=WP_038270938.1;transl_table=11 NZ_CP087680.1 RefSeq gene 740404 740775 . + . ID=gene-LPH41_RS03445;Name=LPH41_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03445;old_locus_tag=LPH41_03445 NZ_CP087680.1 Protein Homology CDS 740404 740775 . + 0 ID=cds-WP_038270937.1;Parent=gene-LPH41_RS03445;Dbxref=Genbank:WP_038270937.1;Name=WP_038270937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893667.1;locus_tag=LPH41_RS03445;product=hypothetical protein;protein_id=WP_038270937.1;transl_table=11 NZ_CP087680.1 RefSeq gene 740804 741601 . + . ID=gene-LPH41_RS03450;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LPH41_RS03450;old_locus_tag=LPH41_03450 NZ_CP087680.1 Protein Homology CDS 740804 741601 . + 0 ID=cds-WP_038270936.1;Parent=gene-LPH41_RS03450;Dbxref=Genbank:WP_038270936.1;Name=WP_038270936.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814108.1;locus_tag=LPH41_RS03450;product=F0F1 ATP synthase subunit A;protein_id=WP_038270936.1;transl_table=11 NZ_CP087680.1 RefSeq gene 741663 741968 . + . ID=gene-LPH41_RS03455;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LPH41_RS03455;old_locus_tag=LPH41_03455 NZ_CP087680.1 Protein Homology CDS 741663 741968 . + 0 ID=cds-WP_038270935.1;Parent=gene-LPH41_RS03455;Dbxref=Genbank:WP_038270935.1;Name=WP_038270935.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372004.1;locus_tag=LPH41_RS03455;product=F0F1 ATP synthase subunit C;protein_id=WP_038270935.1;transl_table=11 NZ_CP087680.1 RefSeq gene 742092 742562 . + . ID=gene-LPH41_RS03460;Name=LPH41_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03460;old_locus_tag=LPH41_03460 NZ_CP087680.1 Protein Homology CDS 742092 742562 . + 0 ID=cds-WP_038270934.1;Parent=gene-LPH41_RS03460;Dbxref=Genbank:WP_038270934.1;Name=WP_038270934.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901014.1;locus_tag=LPH41_RS03460;product=F0F1 ATP synthase subunit B;protein_id=WP_038270934.1;transl_table=11 NZ_CP087680.1 RefSeq gene 742566 743093 . + . ID=gene-LPH41_RS03465;Name=LPH41_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03465;old_locus_tag=LPH41_03465 NZ_CP087680.1 Protein Homology CDS 742566 743093 . + 0 ID=cds-WP_038270933.1;Parent=gene-LPH41_RS03465;Dbxref=Genbank:WP_038270933.1;Name=WP_038270933.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304550.1;locus_tag=LPH41_RS03465;product=F0F1 ATP synthase subunit delta;protein_id=WP_038270933.1;transl_table=11 NZ_CP087680.1 RefSeq gene 743141 744688 . + . ID=gene-LPH41_RS03470;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LPH41_RS03470;old_locus_tag=LPH41_03470 NZ_CP087680.1 Protein Homology CDS 743141 744688 . + 0 ID=cds-WP_038270931.1;Parent=gene-LPH41_RS03470;Dbxref=Genbank:WP_038270931.1;Name=WP_038270931.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161761.1;locus_tag=LPH41_RS03470;product=F0F1 ATP synthase subunit alpha;protein_id=WP_038270931.1;transl_table=11 NZ_CP087680.1 RefSeq gene 744780 745643 . + . ID=gene-LPH41_RS03475;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LPH41_RS03475;old_locus_tag=LPH41_03475 NZ_CP087680.1 Protein Homology CDS 744780 745643 . + 0 ID=cds-WP_038270929.1;Parent=gene-LPH41_RS03475;Dbxref=Genbank:WP_038270929.1;Name=WP_038270929.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371995.1;locus_tag=LPH41_RS03475;product=F0F1 ATP synthase subunit gamma;protein_id=WP_038270929.1;transl_table=11 NZ_CP087680.1 RefSeq gene 745723 747123 . + . ID=gene-LPH41_RS03480;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LPH41_RS03480;old_locus_tag=LPH41_03480 NZ_CP087680.1 Protein Homology CDS 745723 747123 . + 0 ID=cds-WP_038270927.1;Parent=gene-LPH41_RS03480;Dbxref=Genbank:WP_038270927.1;Name=WP_038270927.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090068.1;locus_tag=LPH41_RS03480;product=F0F1 ATP synthase subunit beta;protein_id=WP_038270927.1;transl_table=11 NZ_CP087680.1 RefSeq gene 747230 747652 . + . ID=gene-LPH41_RS03485;Name=LPH41_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03485;old_locus_tag=LPH41_03485 NZ_CP087680.1 Protein Homology CDS 747230 747652 . + 0 ID=cds-WP_038270925.1;Parent=gene-LPH41_RS03485;Dbxref=Genbank:WP_038270925.1;Name=WP_038270925.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407577.1;locus_tag=LPH41_RS03485;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_038270925.1;transl_table=11 NZ_CP087680.1 RefSeq gene 747919 748494 . + . ID=gene-LPH41_RS03490;Name=LPH41_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03490;old_locus_tag=LPH41_03490 NZ_CP087680.1 Protein Homology CDS 747919 748494 . + 0 ID=cds-WP_038270923.1;Parent=gene-LPH41_RS03490;Dbxref=Genbank:WP_038270923.1;Name=WP_038270923.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852523.1;locus_tag=LPH41_RS03490;product=chorismate mutase;protein_id=WP_038270923.1;transl_table=11 NZ_CP087680.1 RefSeq gene 748857 750224 . + . ID=gene-LPH41_RS03495;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LPH41_RS03495;old_locus_tag=LPH41_03495 NZ_CP087680.1 Protein Homology CDS 748857 750224 . + 0 ID=cds-WP_038271011.1;Parent=gene-LPH41_RS03495;Dbxref=Genbank:WP_038271011.1;Name=WP_038271011.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407581.1;locus_tag=LPH41_RS03495;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_038271011.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 751317 751838 . - . ID=gene-LPH41_RS03500;Name=LPH41_RS03500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS03500;old_locus_tag=LPH41_03500;partial=true;pseudo=true;start_range=.,751317 NZ_CP087680.1 Protein Homology CDS 751317 751838 . - 0 ID=cds-LPH41_RS03500;Parent=gene-LPH41_RS03500;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657241.1;locus_tag=LPH41_RS03500;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,751317;transl_table=11 NZ_CP087680.1 RefSeq gene 752180 752812 . - . ID=gene-LPH41_RS03505;Name=LPH41_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03505;old_locus_tag=LPH41_03505 NZ_CP087680.1 Protein Homology CDS 752180 752812 . - 0 ID=cds-WP_200866193.1;Parent=gene-LPH41_RS03505;Dbxref=Genbank:WP_200866193.1;Name=WP_200866193.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=LPH41_RS03505;product=amidohydrolase family protein;protein_id=WP_200866193.1;transl_table=11 NZ_CP087680.1 RefSeq gene 753034 754017 . - . ID=gene-LPH41_RS03510;Name=LPH41_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03510;old_locus_tag=LPH41_03510 NZ_CP087680.1 Protein Homology CDS 753034 754017 . - 0 ID=cds-WP_038270920.1;Parent=gene-LPH41_RS03510;Dbxref=Genbank:WP_038270920.1;Name=WP_038270920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007508381.1;locus_tag=LPH41_RS03510;product=aldo/keto reductase;protein_id=WP_038270920.1;transl_table=11 NZ_CP087680.1 RefSeq gene 754085 754288 . - . ID=gene-LPH41_RS03515;Name=LPH41_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03515;old_locus_tag=LPH41_03515 NZ_CP087680.1 GeneMarkS-2+ CDS 754085 754288 . - 0 ID=cds-WP_051482293.1;Parent=gene-LPH41_RS03515;Dbxref=Genbank:WP_051482293.1;Name=WP_051482293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03515;product=hypothetical protein;protein_id=WP_051482293.1;transl_table=11 NZ_CP087680.1 RefSeq gene 755144 755833 . - . ID=gene-LPH41_RS03520;Name=LPH41_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03520;old_locus_tag=LPH41_03520 NZ_CP087680.1 Protein Homology CDS 755144 755833 . - 0 ID=cds-WP_038270918.1;Parent=gene-LPH41_RS03520;Dbxref=Genbank:WP_038270918.1;Name=WP_038270918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893654.1;locus_tag=LPH41_RS03520;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_038270918.1;transl_table=11 NZ_CP087680.1 RefSeq gene 755838 756896 . - . ID=gene-LPH41_RS03525;Name=LPH41_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03525;old_locus_tag=LPH41_03525 NZ_CP087680.1 Protein Homology CDS 755838 756896 . - 0 ID=cds-WP_038270917.1;Parent=gene-LPH41_RS03525;Dbxref=Genbank:WP_038270917.1;Name=WP_038270917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852526.1;locus_tag=LPH41_RS03525;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_038270917.1;transl_table=11 NZ_CP087680.1 RefSeq gene 756985 757284 . - . ID=gene-LPH41_RS03530;Name=LPH41_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03530;old_locus_tag=LPH41_03530 NZ_CP087680.1 Protein Homology CDS 756985 757284 . - 0 ID=cds-WP_038270915.1;Parent=gene-LPH41_RS03530;Dbxref=Genbank:WP_038270915.1;Name=WP_038270915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852527.1;locus_tag=LPH41_RS03530;product=superoxide dismutase;protein_id=WP_038270915.1;transl_table=11 NZ_CP087680.1 RefSeq gene 757322 757891 . - . ID=gene-LPH41_RS03535;Name=LPH41_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03535;old_locus_tag=LPH41_03535 NZ_CP087680.1 Protein Homology CDS 757322 757891 . - 0 ID=cds-WP_038270913.1;Parent=gene-LPH41_RS03535;Dbxref=Genbank:WP_038270913.1;Name=WP_038270913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852528.1;locus_tag=LPH41_RS03535;product=flavodoxin family protein;protein_id=WP_038270913.1;transl_table=11 NZ_CP087680.1 RefSeq gene 758070 758984 . + . ID=gene-LPH41_RS03540;Name=LPH41_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03540;old_locus_tag=LPH41_03540 NZ_CP087680.1 Protein Homology CDS 758070 758984 . + 0 ID=cds-WP_038271010.1;Parent=gene-LPH41_RS03540;Dbxref=Genbank:WP_038271010.1;Name=WP_038271010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017916574.1;locus_tag=LPH41_RS03540;product=LysR family transcriptional regulator;protein_id=WP_038271010.1;transl_table=11 NZ_CP087680.1 RefSeq gene 759304 759714 . + . ID=gene-LPH41_RS03545;Name=LPH41_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03545;old_locus_tag=LPH41_03545 NZ_CP087680.1 Protein Homology CDS 759304 759714 . + 0 ID=cds-WP_201745835.1;Parent=gene-LPH41_RS03545;Dbxref=Genbank:WP_201745835.1;Name=WP_201745835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015925.2;locus_tag=LPH41_RS03545;product=putative quinol monooxygenase;protein_id=WP_201745835.1;transl_table=11 NZ_CP087680.1 RefSeq gene 760506 760973 . + . ID=gene-LPH41_RS03550;Name=LPH41_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03550;old_locus_tag=LPH41_03550 NZ_CP087680.1 Protein Homology CDS 760506 760973 . + 0 ID=cds-WP_038270910.1;Parent=gene-LPH41_RS03550;Dbxref=Genbank:WP_038270910.1;Name=WP_038270910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015824.2;locus_tag=LPH41_RS03550;product=YfbU family protein;protein_id=WP_038270910.1;transl_table=11 NZ_CP087680.1 RefSeq gene 761039 761124 . - . ID=gene-LPH41_RS03555;Name=LPH41_RS03555;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS03555;old_locus_tag=LPH41_03555 NZ_CP087680.1 tRNAscan-SE tRNA 761039 761124 . - . ID=rna-LPH41_RS03555;Parent=gene-LPH41_RS03555;anticodon=(pos:complement(761090..761092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03555;product=tRNA-Ser NZ_CP087680.1 tRNAscan-SE exon 761039 761124 . - . ID=exon-LPH41_RS03555-1;Parent=rna-LPH41_RS03555;anticodon=(pos:complement(761090..761092));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03555;product=tRNA-Ser NZ_CP087680.1 RefSeq pseudogene 761313 762047 . - . ID=gene-LPH41_RS11975;Name=LPH41_RS11975;end_range=762047,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11975;partial=true;pseudo=true;start_range=.,761313 NZ_CP087680.1 Protein Homology CDS 761313 762047 . - 0 ID=cds-LPH41_RS11975;Parent=gene-LPH41_RS11975;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=762047,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003092331.1;locus_tag=LPH41_RS11975;partial=true;product=PDDEXK nuclease domain-containing protein;pseudo=true;start_range=.,761313;transl_table=11 NZ_CP087680.1 RefSeq gene 762115 763482 . - . ID=gene-LPH41_RS03570;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LPH41_RS03570;old_locus_tag=LPH41_03570 NZ_CP087680.1 Protein Homology CDS 762115 763482 . - 0 ID=cds-WP_038270909.1;Parent=gene-LPH41_RS03570;Dbxref=Genbank:WP_038270909.1;Name=WP_038270909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090050.1;locus_tag=LPH41_RS03570;product=metalloprotease PmbA;protein_id=WP_038270909.1;transl_table=11 NZ_CP087680.1 RefSeq gene 763560 764111 . + . ID=gene-LPH41_RS03575;Name=LPH41_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03575;old_locus_tag=LPH41_03575 NZ_CP087680.1 Protein Homology CDS 763560 764111 . + 0 ID=cds-WP_038271008.1;Parent=gene-LPH41_RS03575;Dbxref=Genbank:WP_038271008.1;Name=WP_038271008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090049.1;locus_tag=LPH41_RS03575;product=ribosome-associated protein;protein_id=WP_038271008.1;transl_table=11 NZ_CP087680.1 RefSeq gene 764618 766075 . - . ID=gene-LPH41_RS03580;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LPH41_RS03580;old_locus_tag=LPH41_03580 NZ_CP087680.1 Protein Homology CDS 764618 766075 . - 0 ID=cds-WP_038270908.1;Parent=gene-LPH41_RS03580;Dbxref=Genbank:WP_038270908.1;Name=WP_038270908.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972594.1;locus_tag=LPH41_RS03580;product=metalloprotease TldD;protein_id=WP_038270908.1;transl_table=11 NZ_CP087680.1 RefSeq gene 766209 770009 . - . ID=gene-LPH41_RS03585;Name=LPH41_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03585;old_locus_tag=LPH41_03585 NZ_CP087680.1 Protein Homology CDS 766209 770009 . - 0 ID=cds-WP_230428165.1;Parent=gene-LPH41_RS03585;Dbxref=Genbank:WP_230428165.1;Name=WP_230428165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607624.1;locus_tag=LPH41_RS03585;product=YhdP family protein;protein_id=WP_230428165.1;transl_table=11 NZ_CP087680.1 RefSeq gene 770165 771661 . - . ID=gene-LPH41_RS03590;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LPH41_RS03590;old_locus_tag=LPH41_03590 NZ_CP087680.1 Protein Homology CDS 770165 771661 . - 0 ID=cds-WP_230439321.1;Parent=gene-LPH41_RS03590;Dbxref=Genbank:WP_230439321.1;Name=WP_230439321.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802933.1;locus_tag=LPH41_RS03590;product=ribonuclease G;protein_id=WP_230439321.1;transl_table=11 NZ_CP087680.1 RefSeq gene 771662 772231 . - . ID=gene-LPH41_RS03595;Name=LPH41_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03595;old_locus_tag=LPH41_03595 NZ_CP087680.1 Protein Homology CDS 771662 772231 . - 0 ID=cds-WP_038271007.1;Parent=gene-LPH41_RS03595;Dbxref=Genbank:WP_038271007.1;Name=WP_038271007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017915486.1;locus_tag=LPH41_RS03595;product=Maf-like protein;protein_id=WP_038271007.1;transl_table=11 NZ_CP087680.1 RefSeq gene 772349 773083 . + . ID=gene-LPH41_RS03600;Name=LPH41_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03600;old_locus_tag=LPH41_03600 NZ_CP087680.1 Protein Homology CDS 772349 773083 . + 0 ID=cds-WP_038270905.1;Parent=gene-LPH41_RS03600;Dbxref=Genbank:WP_038270905.1;Name=WP_038270905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893640.1;locus_tag=LPH41_RS03600;product=SIMPL domain-containing protein;protein_id=WP_038270905.1;transl_table=11 NZ_CP087680.1 RefSeq gene 774250 775077 . + . ID=gene-LPH41_RS03605;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LPH41_RS03605;old_locus_tag=LPH41_03605 NZ_CP087680.1 Protein Homology CDS 774250 775077 . + 0 ID=cds-WP_038270904.1;Parent=gene-LPH41_RS03605;Dbxref=Genbank:WP_038270904.1;Name=WP_038270904.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850995.1;locus_tag=LPH41_RS03605;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_038270904.1;transl_table=11 NZ_CP087680.1 RefSeq gene 775429 775698 . - . ID=gene-LPH41_RS03610;Name=LPH41_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03610;old_locus_tag=LPH41_03610 NZ_CP087680.1 GeneMarkS-2+ CDS 775429 775698 . - 0 ID=cds-WP_038270903.1;Parent=gene-LPH41_RS03610;Dbxref=Genbank:WP_038270903.1;Name=WP_038270903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03610;product=hypothetical protein;protein_id=WP_038270903.1;transl_table=11 NZ_CP087680.1 RefSeq gene 775711 776670 . - . ID=gene-LPH41_RS03615;Name=LPH41_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03615;old_locus_tag=LPH41_03615 NZ_CP087680.1 Protein Homology CDS 775711 776670 . - 0 ID=cds-WP_038270902.1;Parent=gene-LPH41_RS03615;Dbxref=Genbank:WP_038270902.1;Name=WP_038270902.1;Ontology_term=GO:0008413;gbkey=CDS;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850994.1;locus_tag=LPH41_RS03615;product=Nudix family hydrolase;protein_id=WP_038270902.1;transl_table=11 NZ_CP087680.1 RefSeq gene 777362 777446 . + . ID=gene-LPH41_RS03620;Name=LPH41_RS03620;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS03620;old_locus_tag=LPH41_03620 NZ_CP087680.1 tRNAscan-SE tRNA 777362 777446 . + . ID=rna-LPH41_RS03620;Parent=gene-LPH41_RS03620;anticodon=(pos:777396..777398);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03620;product=tRNA-Leu NZ_CP087680.1 tRNAscan-SE exon 777362 777446 . + . ID=exon-LPH41_RS03620-1;Parent=rna-LPH41_RS03620;anticodon=(pos:777396..777398);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS03620;product=tRNA-Leu NZ_CP087680.1 RefSeq gene 779186 779329 . - . ID=gene-LPH41_RS03625;Name=LPH41_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03625;old_locus_tag=LPH41_03625 NZ_CP087680.1 GeneMarkS-2+ CDS 779186 779329 . - 0 ID=cds-WP_160165159.1;Parent=gene-LPH41_RS03625;Dbxref=Genbank:WP_160165159.1;Name=WP_160165159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03625;product=hypothetical protein;protein_id=WP_160165159.1;transl_table=11 NZ_CP087680.1 RefSeq gene 779363 779488 . - . ID=gene-LPH41_RS11980;Name=LPH41_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11980 NZ_CP087680.1 GeneMarkS-2+ CDS 779363 779488 . - 0 ID=cds-WP_267903171.1;Parent=gene-LPH41_RS11980;Dbxref=Genbank:WP_267903171.1;Name=WP_267903171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11980;product=hypothetical protein;protein_id=WP_267903171.1;transl_table=11 NZ_CP087680.1 RefSeq gene 779530 779778 . + . ID=gene-LPH41_RS03630;Name=LPH41_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03630;old_locus_tag=LPH41_03630 NZ_CP087680.1 GeneMarkS-2+ CDS 779530 779778 . + 0 ID=cds-WP_152536600.1;Parent=gene-LPH41_RS03630;Dbxref=Genbank:WP_152536600.1;Name=WP_152536600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03630;product=hypothetical protein;protein_id=WP_152536600.1;transl_table=11 NZ_CP087680.1 RefSeq gene 780001 781404 . - . ID=gene-LPH41_RS03635;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LPH41_RS03635;old_locus_tag=LPH41_03635 NZ_CP087680.1 Protein Homology CDS 780001 781404 . - 0 ID=cds-WP_038270900.1;Parent=gene-LPH41_RS03635;Dbxref=Genbank:WP_038270900.1;Name=WP_038270900.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085662.1;locus_tag=LPH41_RS03635;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_038270900.1;transl_table=11 NZ_CP087680.1 RefSeq gene 781385 782746 . - . ID=gene-LPH41_RS03640;Name=murL;gbkey=Gene;gene=murL;gene_biotype=protein_coding;locus_tag=LPH41_RS03640;old_locus_tag=LPH41_03640 NZ_CP087680.1 Protein Homology CDS 781385 782746 . - 0 ID=cds-WP_038270899.1;Parent=gene-LPH41_RS03640;Dbxref=Genbank:WP_038270899.1;Name=WP_038270899.1;Ontology_term=GO:0009252,GO:0016855;gbkey=CDS;gene=murL;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470437.1;locus_tag=LPH41_RS03640;product=UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase;protein_id=WP_038270899.1;transl_table=11 NZ_CP087680.1 RefSeq gene 782837 785440 . - . ID=gene-LPH41_RS03645;Name=LPH41_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03645;old_locus_tag=LPH41_03645 NZ_CP087680.1 Protein Homology CDS 782837 785440 . - 0 ID=cds-WP_038270898.1;Parent=gene-LPH41_RS03645;Dbxref=Genbank:WP_038270898.1;Name=WP_038270898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085664.1;locus_tag=LPH41_RS03645;product=bifunctional aspartate kinase/diaminopimelate decarboxylase;protein_id=WP_038270898.1;transl_table=11 NZ_CP087680.1 RefSeq gene 785915 786778 . + . ID=gene-LPH41_RS03650;Name=LPH41_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03650;old_locus_tag=LPH41_03650 NZ_CP087680.1 Protein Homology CDS 785915 786778 . + 0 ID=cds-WP_038270896.1;Parent=gene-LPH41_RS03650;Dbxref=Genbank:WP_038270896.1;Name=WP_038270896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850991.1;locus_tag=LPH41_RS03650;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_038270896.1;transl_table=11 NZ_CP087680.1 RefSeq gene 786815 788971 . - . ID=gene-LPH41_RS03655;Name=LPH41_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03655;old_locus_tag=LPH41_03655 NZ_CP087680.1 Protein Homology CDS 786815 788971 . - 0 ID=cds-WP_038270895.1;Parent=gene-LPH41_RS03655;Dbxref=Genbank:WP_038270895.1;Name=WP_038270895.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237699.1;locus_tag=LPH41_RS03655;product=response regulator;protein_id=WP_038270895.1;transl_table=11 NZ_CP087680.1 RefSeq gene 788955 790097 . - . ID=gene-LPH41_RS03660;Name=LPH41_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03660;old_locus_tag=LPH41_03660 NZ_CP087680.1 Protein Homology CDS 788955 790097 . - 0 ID=cds-WP_051482298.1;Parent=gene-LPH41_RS03660;Dbxref=Genbank:WP_051482298.1;Name=WP_051482298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085667.1;locus_tag=LPH41_RS03660;product=two-component system response regulator;protein_id=WP_051482298.1;transl_table=11 NZ_CP087680.1 RefSeq gene 790241 791761 . - . ID=gene-LPH41_RS03665;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LPH41_RS03665;old_locus_tag=LPH41_03665 NZ_CP087680.1 Protein Homology CDS 790241 791761 . - 0 ID=cds-WP_038270894.1;Parent=gene-LPH41_RS03665;Dbxref=Genbank:WP_038270894.1;Name=WP_038270894.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085668.1;locus_tag=LPH41_RS03665;product=lysine--tRNA ligase;protein_id=WP_038270894.1;transl_table=11 NZ_CP087680.1 RefSeq gene 791947 793072 . - . ID=gene-LPH41_RS03670;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LPH41_RS03670;old_locus_tag=LPH41_03670 NZ_CP087680.1 Protein Homology CDS 792998 793072 . - 0 ID=cds-WP_114867074.1;Parent=gene-LPH41_RS03670;Dbxref=Genbank:WP_114867074.1;Name=WP_114867074.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037064.1;locus_tag=LPH41_RS03670;product=peptide chain release factor 2;protein_id=WP_114867074.1;transl_table=11 NZ_CP087680.1 Protein Homology CDS 791947 792996 . - 0 ID=cds-WP_114867074.1;Parent=gene-LPH41_RS03670;Dbxref=Genbank:WP_114867074.1;Name=WP_114867074.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037064.1;locus_tag=LPH41_RS03670;product=peptide chain release factor 2;protein_id=WP_114867074.1;transl_table=11 NZ_CP087680.1 RefSeq gene 793684 795450 . - . ID=gene-LPH41_RS03675;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LPH41_RS03675;old_locus_tag=LPH41_03675 NZ_CP087680.1 Protein Homology CDS 793684 795450 . - 0 ID=cds-WP_114867209.1;Parent=gene-LPH41_RS03675;Dbxref=Genbank:WP_114867209.1;Name=WP_114867209.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337671.1;locus_tag=LPH41_RS03675;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_114867209.1;transl_table=11 NZ_CP087680.1 RefSeq gene 795453 796373 . - . ID=gene-LPH41_RS03680;Name=LPH41_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03680;old_locus_tag=LPH41_03680 NZ_CP087680.1 Protein Homology CDS 795453 796373 . - 0 ID=cds-WP_038270892.1;Parent=gene-LPH41_RS03680;Dbxref=Genbank:WP_038270892.1;Name=WP_038270892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806444.1;locus_tag=LPH41_RS03680;product=phosphoglycerate mutase;protein_id=WP_038270892.1;transl_table=11 NZ_CP087680.1 RefSeq gene 796381 796857 . - . ID=gene-LPH41_RS03685;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LPH41_RS03685;old_locus_tag=LPH41_03685 NZ_CP087680.1 Protein Homology CDS 796381 796857 . - 0 ID=cds-WP_081755418.1;Parent=gene-LPH41_RS03685;Dbxref=Genbank:WP_081755418.1;Name=WP_081755418.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085672.1;locus_tag=LPH41_RS03685;product=transcription elongation factor GreA;protein_id=WP_081755418.1;transl_table=11 NZ_CP087680.1 RefSeq gene 796854 800096 . - . ID=gene-LPH41_RS03690;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LPH41_RS03690;old_locus_tag=LPH41_03690 NZ_CP087680.1 Protein Homology CDS 796854 800096 . - 0 ID=cds-WP_038270888.1;Parent=gene-LPH41_RS03690;Dbxref=Genbank:WP_038270888.1;Name=WP_038270888.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085673.1;locus_tag=LPH41_RS03690;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_038270888.1;transl_table=11 NZ_CP087680.1 RefSeq gene 800530 801654 . - . ID=gene-LPH41_RS03695;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LPH41_RS03695;old_locus_tag=LPH41_03695 NZ_CP087680.1 Protein Homology CDS 800530 801654 . - 0 ID=cds-WP_038271004.1;Parent=gene-LPH41_RS03695;Dbxref=Genbank:WP_038271004.1;Name=WP_038271004.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893623.1;locus_tag=LPH41_RS03695;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_038271004.1;transl_table=11 NZ_CP087680.1 RefSeq gene 801852 802520 . - . ID=gene-LPH41_RS03700;Name=LPH41_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03700;old_locus_tag=LPH41_03700 NZ_CP087680.1 Protein Homology CDS 801852 802520 . - 0 ID=cds-WP_051482290.1;Parent=gene-LPH41_RS03700;Dbxref=Genbank:WP_051482290.1;Name=WP_051482290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114807.1;locus_tag=LPH41_RS03700;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_051482290.1;transl_table=11 NZ_CP087680.1 RefSeq gene 803720 806485 . - . ID=gene-LPH41_RS03705;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LPH41_RS03705;old_locus_tag=LPH41_03705 NZ_CP087680.1 Protein Homology CDS 803720 806485 . - 0 ID=cds-WP_038271003.1;Parent=gene-LPH41_RS03705;Dbxref=Genbank:WP_038271003.1;Name=WP_038271003.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159421.1;locus_tag=LPH41_RS03705;product=DNA polymerase I;protein_id=WP_038271003.1;transl_table=11 NZ_CP087680.1 RefSeq gene 806570 806863 . + . ID=gene-LPH41_RS03710;Name=LPH41_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03710;old_locus_tag=LPH41_03710 NZ_CP087680.1 Protein Homology CDS 806570 806863 . + 0 ID=cds-WP_038270884.1;Parent=gene-LPH41_RS03710;Dbxref=Genbank:WP_038270884.1;Name=WP_038270884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893619.1;locus_tag=LPH41_RS03710;product=DUF2782 domain-containing protein;protein_id=WP_038270884.1;transl_table=11 NZ_CP087680.1 RefSeq gene 807772 808410 . - . ID=gene-LPH41_RS03715;Name=LPH41_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03715;old_locus_tag=LPH41_03715 NZ_CP087680.1 Protein Homology CDS 807772 808410 . - 0 ID=cds-WP_038271002.1;Parent=gene-LPH41_RS03715;Dbxref=Genbank:WP_038271002.1;Name=WP_038271002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490472.1;locus_tag=LPH41_RS03715;product=DUF4375 domain-containing protein;protein_id=WP_038271002.1;transl_table=11 NZ_CP087680.1 RefSeq gene 810838 811056 . - . ID=gene-LPH41_RS03720;Name=LPH41_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03720;old_locus_tag=LPH41_03720 NZ_CP087680.1 Protein Homology CDS 810838 811056 . - 0 ID=cds-WP_038270881.1;Parent=gene-LPH41_RS03720;Dbxref=Genbank:WP_038270881.1;Name=WP_038270881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=LPH41_RS03720;product=AlpA family phage regulatory protein;protein_id=WP_038270881.1;transl_table=11 NZ_CP087680.1 RefSeq gene 811259 811429 . - . ID=gene-LPH41_RS03725;Name=LPH41_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03725;old_locus_tag=LPH41_03725 NZ_CP087680.1 GeneMarkS-2+ CDS 811259 811429 . - 0 ID=cds-WP_160165158.1;Parent=gene-LPH41_RS03725;Dbxref=Genbank:WP_160165158.1;Name=WP_160165158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03725;product=hypothetical protein;protein_id=WP_160165158.1;transl_table=11 NZ_CP087680.1 RefSeq gene 811566 811763 . - . ID=gene-LPH41_RS03730;Name=LPH41_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03730;old_locus_tag=LPH41_03730 NZ_CP087680.1 GeneMarkS-2+ CDS 811566 811763 . - 0 ID=cds-WP_038270880.1;Parent=gene-LPH41_RS03730;Dbxref=Genbank:WP_038270880.1;Name=WP_038270880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03730;product=hypothetical protein;protein_id=WP_038270880.1;transl_table=11 NZ_CP087680.1 RefSeq gene 811947 812297 . - . ID=gene-LPH41_RS03735;Name=LPH41_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03735;old_locus_tag=LPH41_03735 NZ_CP087680.1 GeneMarkS-2+ CDS 811947 812297 . - 0 ID=cds-WP_152536599.1;Parent=gene-LPH41_RS03735;Dbxref=Genbank:WP_152536599.1;Name=WP_152536599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03735;product=hypothetical protein;protein_id=WP_152536599.1;transl_table=11 NZ_CP087680.1 RefSeq gene 813020 813343 . - . ID=gene-LPH41_RS03740;Name=LPH41_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03740;old_locus_tag=LPH41_03740 NZ_CP087680.1 GeneMarkS-2+ CDS 813020 813343 . - 0 ID=cds-WP_069636207.1;Parent=gene-LPH41_RS03740;Dbxref=Genbank:WP_069636207.1;Name=WP_069636207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03740;product=hypothetical protein;protein_id=WP_069636207.1;transl_table=11 NZ_CP087680.1 RefSeq gene 813441 813716 . + . ID=gene-LPH41_RS03745;Name=LPH41_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03745;old_locus_tag=LPH41_03745 NZ_CP087680.1 Protein Homology CDS 813441 813716 . + 0 ID=cds-WP_051482289.1;Parent=gene-LPH41_RS03745;Dbxref=Genbank:WP_051482289.1;Name=WP_051482289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027273.2;locus_tag=LPH41_RS03745;product=YdaS family helix-turn-helix protein;protein_id=WP_051482289.1;transl_table=11 NZ_CP087680.1 RefSeq gene 813976 814149 . + . ID=gene-LPH41_RS03750;Name=LPH41_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03750;old_locus_tag=LPH41_03750 NZ_CP087680.1 GeneMarkS-2+ CDS 813976 814149 . + 0 ID=cds-WP_160165157.1;Parent=gene-LPH41_RS03750;Dbxref=Genbank:WP_160165157.1;Name=WP_160165157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03750;product=hypothetical protein;protein_id=WP_160165157.1;transl_table=11 NZ_CP087680.1 RefSeq gene 814301 814792 . - . ID=gene-LPH41_RS03755;Name=LPH41_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03755;old_locus_tag=LPH41_03755 NZ_CP087680.1 GeneMarkS-2+ CDS 814301 814792 . - 0 ID=cds-WP_038270878.1;Parent=gene-LPH41_RS03755;Dbxref=Genbank:WP_038270878.1;Name=WP_038270878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03755;product=hypothetical protein;protein_id=WP_038270878.1;transl_table=11 NZ_CP087680.1 RefSeq gene 815151 815366 . + . ID=gene-LPH41_RS03760;Name=LPH41_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03760;old_locus_tag=LPH41_03760 NZ_CP087680.1 GeneMarkS-2+ CDS 815151 815366 . + 0 ID=cds-WP_230428164.1;Parent=gene-LPH41_RS03760;Dbxref=Genbank:WP_230428164.1;Name=WP_230428164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03760;product=hypothetical protein;protein_id=WP_230428164.1;transl_table=11 NZ_CP087680.1 RefSeq gene 815406 815948 . - . ID=gene-LPH41_RS03765;Name=LPH41_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03765;old_locus_tag=LPH41_03765 NZ_CP087680.1 GeneMarkS-2+ CDS 815406 815948 . - 0 ID=cds-WP_038270877.1;Parent=gene-LPH41_RS03765;Dbxref=Genbank:WP_038270877.1;Name=WP_038270877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03765;product=hypothetical protein;protein_id=WP_038270877.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 816132 816255 . - . ID=gene-LPH41_RS03770;Name=LPH41_RS03770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS03770;old_locus_tag=LPH41_03770;partial=true;pseudo=true;start_range=.,816132 NZ_CP087680.1 Protein Homology CDS 816132 816255 . - 0 ID=cds-LPH41_RS03770;Parent=gene-LPH41_RS03770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003227859.1;locus_tag=LPH41_RS03770;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,816132;transl_table=11 NZ_CP087680.1 RefSeq gene 816579 817697 . - . ID=gene-LPH41_RS03775;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=LPH41_RS03775;old_locus_tag=LPH41_03775 NZ_CP087680.1 Protein Homology CDS 816579 817697 . - 0 ID=cds-WP_114867072.1;Parent=gene-LPH41_RS03775;Dbxref=Genbank:WP_114867072.1;Name=WP_114867072.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413430.1;locus_tag=LPH41_RS03775;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_114867072.1;transl_table=11 NZ_CP087680.1 RefSeq gene 817996 818535 . - . ID=gene-LPH41_RS03780;Name=LPH41_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03780;old_locus_tag=LPH41_03780 NZ_CP087680.1 GeneMarkS-2+ CDS 817996 818535 . - 0 ID=cds-WP_152536598.1;Parent=gene-LPH41_RS03780;Dbxref=Genbank:WP_152536598.1;Name=WP_152536598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03780;product=hypothetical protein;protein_id=WP_152536598.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 818700 819352 . - . ID=gene-LPH41_RS03785;Name=LPH41_RS03785;end_range=819352,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS03785;old_locus_tag=LPH41_03785;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 818700 819352 . - 0 ID=cds-LPH41_RS03785;Parent=gene-LPH41_RS03785;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=819352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003156775.1;locus_tag=LPH41_RS03785;partial=true;product=sodium-independent anion transporter;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 819358 819588 . + . ID=gene-LPH41_RS03790;Name=LPH41_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03790;old_locus_tag=LPH41_03790 NZ_CP087680.1 GeneMarkS-2+ CDS 819358 819588 . + 0 ID=cds-WP_038270872.1;Parent=gene-LPH41_RS03790;Dbxref=Genbank:WP_038270872.1;Name=WP_038270872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03790;product=hypothetical protein;protein_id=WP_038270872.1;transl_table=11 NZ_CP087680.1 RefSeq gene 819585 820862 . + . ID=gene-LPH41_RS03795;Name=LPH41_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03795;old_locus_tag=LPH41_03795 NZ_CP087680.1 Protein Homology CDS 819585 820862 . + 0 ID=cds-WP_038270871.1;Parent=gene-LPH41_RS03795;Dbxref=Genbank:WP_038270871.1;Name=WP_038270871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894945.1;locus_tag=LPH41_RS03795;product=DUF2800 domain-containing protein;protein_id=WP_038270871.1;transl_table=11 NZ_CP087680.1 RefSeq gene 820859 821212 . + . ID=gene-LPH41_RS03800;Name=LPH41_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03800;old_locus_tag=LPH41_03800 NZ_CP087680.1 Protein Homology CDS 820859 821212 . + 0 ID=cds-WP_081755417.1;Parent=gene-LPH41_RS03800;Dbxref=Genbank:WP_081755417.1;Name=WP_081755417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022444.2;locus_tag=LPH41_RS03800;product=DUF2815 family protein;protein_id=WP_081755417.1;transl_table=11 NZ_CP087680.1 RefSeq gene 821236 821535 . + . ID=gene-LPH41_RS03805;Name=LPH41_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03805;old_locus_tag=LPH41_03805 NZ_CP087680.1 GeneMarkS-2+ CDS 821236 821535 . + 0 ID=cds-WP_051482410.1;Parent=gene-LPH41_RS03805;Dbxref=Genbank:WP_051482410.1;Name=WP_051482410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03805;product=hypothetical protein;protein_id=WP_051482410.1;transl_table=11 NZ_CP087680.1 RefSeq gene 821539 821811 . + . ID=gene-LPH41_RS03810;Name=LPH41_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03810;old_locus_tag=LPH41_03810 NZ_CP087680.1 Protein Homology CDS 821539 821811 . + 0 ID=cds-WP_114867070.1-3;Parent=gene-LPH41_RS03810;Dbxref=Genbank:WP_114867070.1;Name=WP_114867070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382732.1;locus_tag=LPH41_RS03810;product=VRR-NUC domain-containing protein;protein_id=WP_114867070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 821813 822118 . - . ID=gene-LPH41_RS03815;Name=LPH41_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03815;old_locus_tag=LPH41_03815 NZ_CP087680.1 Protein Homology CDS 821813 822118 . - 0 ID=cds-WP_114867069.1;Parent=gene-LPH41_RS03815;Dbxref=Genbank:WP_114867069.1;Name=WP_114867069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851619.1;locus_tag=LPH41_RS03815;product=DUF1640 domain-containing protein;protein_id=WP_114867069.1;transl_table=11 NZ_CP087680.1 RefSeq gene 822194 823579 . + . ID=gene-LPH41_RS03820;Name=LPH41_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03820;old_locus_tag=LPH41_03820 NZ_CP087680.1 Protein Homology CDS 822194 823579 . + 0 ID=cds-WP_114867068.1-2;Parent=gene-LPH41_RS03820;Dbxref=Genbank:WP_114867068.1;Name=WP_114867068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085030.1;locus_tag=LPH41_RS03820;product=DEAD/DEAH box helicase;protein_id=WP_114867068.1;transl_table=11 NZ_CP087680.1 RefSeq gene 823576 824112 . + . ID=gene-LPH41_RS03825;Name=LPH41_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03825;old_locus_tag=LPH41_03825 NZ_CP087680.1 Protein Homology CDS 823576 824112 . + 0 ID=cds-WP_038273354.1-2;Parent=gene-LPH41_RS03825;Dbxref=Genbank:WP_038273354.1;Name=WP_038273354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH41_RS03825;product=pilin;protein_id=WP_038273354.1;transl_table=11 NZ_CP087680.1 RefSeq gene 824163 824399 . + . ID=gene-LPH41_RS03830;Name=LPH41_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03830;old_locus_tag=LPH41_03830 NZ_CP087680.1 Protein Homology CDS 824163 824399 . + 0 ID=cds-WP_069636229.1-2;Parent=gene-LPH41_RS03830;Dbxref=Genbank:WP_069636229.1;Name=WP_069636229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852651.1;locus_tag=LPH41_RS03830;product=DUF4224 domain-containing protein;protein_id=WP_069636229.1;transl_table=11 NZ_CP087680.1 RefSeq gene 824412 825473 . + . ID=gene-LPH41_RS03835;Name=LPH41_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03835;old_locus_tag=LPH41_03835 NZ_CP087680.1 Protein Homology CDS 824412 825473 . + 0 ID=cds-WP_038273275.1;Parent=gene-LPH41_RS03835;Dbxref=Genbank:WP_038273275.1;Name=WP_038273275.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852652.1;locus_tag=LPH41_RS03835;product=tyrosine-type recombinase/integrase;protein_id=WP_038273275.1;transl_table=11 NZ_CP087680.1 RefSeq gene 826035 827750 . - . ID=gene-LPH41_RS03840;Name=LPH41_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03840;old_locus_tag=LPH41_03840 NZ_CP087680.1 Protein Homology CDS 826035 827750 . - 0 ID=cds-WP_038272070.1;Parent=gene-LPH41_RS03840;Dbxref=Genbank:WP_038272070.1;Name=WP_038272070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091215.1;locus_tag=LPH41_RS03840;product=glycosyltransferase family 39 protein;protein_id=WP_038272070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 827783 829072 . - . ID=gene-LPH41_RS03845;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LPH41_RS03845;old_locus_tag=LPH41_03845 NZ_CP087680.1 Protein Homology CDS 827783 829072 . - 0 ID=cds-WP_038272068.1;Parent=gene-LPH41_RS03845;Dbxref=Genbank:WP_038272068.1;Name=WP_038272068.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849283.1;locus_tag=LPH41_RS03845;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_038272068.1;transl_table=11 NZ_CP087680.1 RefSeq gene 829069 829992 . - . ID=gene-LPH41_RS03850;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LPH41_RS03850;old_locus_tag=LPH41_03850 NZ_CP087680.1 Protein Homology CDS 829069 829992 . - 0 ID=cds-WP_038272066.1;Parent=gene-LPH41_RS03850;Dbxref=Genbank:WP_038272066.1;Name=WP_038272066.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851586.1;locus_tag=LPH41_RS03850;product=methionyl-tRNA formyltransferase;protein_id=WP_038272066.1;transl_table=11 NZ_CP087680.1 RefSeq gene 830098 830610 . - . ID=gene-LPH41_RS03855;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LPH41_RS03855;old_locus_tag=LPH41_03855 NZ_CP087680.1 Protein Homology CDS 830098 830610 . - 0 ID=cds-WP_038272064.1;Parent=gene-LPH41_RS03855;Dbxref=Genbank:WP_038272064.1;Name=WP_038272064.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911379.1;locus_tag=LPH41_RS03855;product=peptide deformylase;protein_id=WP_038272064.1;transl_table=11 NZ_CP087680.1 RefSeq gene 830749 831909 . + . ID=gene-LPH41_RS03860;Name=LPH41_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03860;old_locus_tag=LPH41_03860 NZ_CP087680.1 Protein Homology CDS 830749 831909 . + 0 ID=cds-WP_038272062.1;Parent=gene-LPH41_RS03860;Dbxref=Genbank:WP_038272062.1;Name=WP_038272062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851584.1;locus_tag=LPH41_RS03860;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_038272062.1;transl_table=11 NZ_CP087680.1 RefSeq gene 832004 833143 . + . ID=gene-LPH41_RS03865;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LPH41_RS03865;old_locus_tag=LPH41_03865 NZ_CP087680.1 Protein Homology CDS 832004 833143 . + 0 ID=cds-WP_038272084.1;Parent=gene-LPH41_RS03865;Dbxref=Genbank:WP_038272084.1;Name=WP_038272084.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851583.1;locus_tag=LPH41_RS03865;product=DNA-processing protein DprA;protein_id=WP_038272084.1;transl_table=11 NZ_CP087680.1 RefSeq gene 833189 833662 . + . ID=gene-LPH41_RS03870;Name=LPH41_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03870;old_locus_tag=LPH41_03870 NZ_CP087680.1 Protein Homology CDS 833189 833662 . + 0 ID=cds-WP_038272059.1;Parent=gene-LPH41_RS03870;Dbxref=Genbank:WP_038272059.1;Name=WP_038272059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159357.1;locus_tag=LPH41_RS03870;product=DUF494 family protein;protein_id=WP_038272059.1;transl_table=11 NZ_CP087680.1 RefSeq gene 834483 834791 . + . ID=gene-LPH41_RS03875;Name=LPH41_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03875;old_locus_tag=LPH41_03875 NZ_CP087680.1 GeneMarkS-2+ CDS 834483 834791 . + 0 ID=cds-WP_038272058.1;Parent=gene-LPH41_RS03875;Dbxref=Genbank:WP_038272058.1;Name=WP_038272058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03875;product=RDD family protein;protein_id=WP_038272058.1;transl_table=11 NZ_CP087680.1 RefSeq gene 835071 837506 . + . ID=gene-LPH41_RS03880;Name=LPH41_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03880;old_locus_tag=LPH41_03880 NZ_CP087680.1 Protein Homology CDS 835071 837506 . + 0 ID=cds-WP_038272057.1;Parent=gene-LPH41_RS03880;Dbxref=Genbank:WP_038272057.1;Name=WP_038272057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089635.1;locus_tag=LPH41_RS03880;product=DNA topoisomerase I;protein_id=WP_038272057.1;transl_table=11 NZ_CP087680.1 RefSeq gene 837641 838204 . + . ID=gene-LPH41_RS03885;Name=LPH41_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03885;old_locus_tag=LPH41_03885 NZ_CP087680.1 Protein Homology CDS 837641 838204 . + 0 ID=cds-WP_038272055.1;Parent=gene-LPH41_RS03885;Dbxref=Genbank:WP_038272055.1;Name=WP_038272055.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921907.1;locus_tag=LPH41_RS03885;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_038272055.1;transl_table=11 NZ_CP087680.1 RefSeq gene 839489 839629 . + . ID=gene-LPH41_RS03890;Name=LPH41_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03890;old_locus_tag=LPH41_03890 NZ_CP087680.1 Protein Homology CDS 839489 839629 . + 0 ID=cds-WP_230428163.1;Parent=gene-LPH41_RS03890;Dbxref=Genbank:WP_230428163.1;Name=WP_230428163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024671.2;locus_tag=LPH41_RS03890;product=DUF4065 domain-containing protein;protein_id=WP_230428163.1;transl_table=11 NZ_CP087680.1 RefSeq gene 840197 840775 . + . ID=gene-LPH41_RS03895;Name=LPH41_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03895;old_locus_tag=LPH41_03895 NZ_CP087680.1 Protein Homology CDS 840197 840775 . + 0 ID=cds-WP_038272053.1;Parent=gene-LPH41_RS03895;Dbxref=Genbank:WP_038272053.1;Name=WP_038272053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893616.1;locus_tag=LPH41_RS03895;product=phosphoesterase;protein_id=WP_038272053.1;transl_table=11 NZ_CP087680.1 RefSeq gene 842043 843221 . - . ID=gene-LPH41_RS03900;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LPH41_RS03900;old_locus_tag=LPH41_03900 NZ_CP087680.1 Protein Homology CDS 842043 843221 . - 0 ID=cds-WP_038272082.1;Parent=gene-LPH41_RS03900;Dbxref=Genbank:WP_038272082.1;Name=WP_038272082.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472474.1;locus_tag=LPH41_RS03900;product=nicotinate phosphoribosyltransferase;protein_id=WP_038272082.1;transl_table=11 NZ_CP087680.1 RefSeq gene 844059 844658 . + . ID=gene-LPH41_RS03905;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LPH41_RS03905;old_locus_tag=LPH41_03905 NZ_CP087680.1 Protein Homology CDS 844059 844658 . + 0 ID=cds-WP_038272050.1;Parent=gene-LPH41_RS03905;Dbxref=Genbank:WP_038272050.1;Name=WP_038272050.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893611.1;locus_tag=LPH41_RS03905;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_038272050.1;transl_table=11 NZ_CP087680.1 RefSeq gene 844732 845217 . + . ID=gene-LPH41_RS03910;Name=LPH41_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03910;old_locus_tag=LPH41_03910 NZ_CP087680.1 Protein Homology CDS 844732 845217 . + 0 ID=cds-WP_038272048.1;Parent=gene-LPH41_RS03910;Dbxref=Genbank:WP_038272048.1;Name=WP_038272048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488754.1;locus_tag=LPH41_RS03910;product=asparaginase domain-containing protein;protein_id=WP_038272048.1;transl_table=11 NZ_CP087680.1 RefSeq gene 845480 845635 . + . ID=gene-LPH41_RS03915;Name=LPH41_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03915;old_locus_tag=LPH41_03915 NZ_CP087680.1 GeneMarkS-2+ CDS 845480 845635 . + 0 ID=cds-WP_200866207.1;Parent=gene-LPH41_RS03915;Dbxref=Genbank:WP_200866207.1;Name=WP_200866207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03915;product=hypothetical protein;protein_id=WP_200866207.1;transl_table=11 NZ_CP087680.1 RefSeq gene 845729 846166 . + . ID=gene-LPH41_RS03920;Name=LPH41_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03920;old_locus_tag=LPH41_03920 NZ_CP087680.1 GeneMarkS-2+ CDS 845729 846166 . + 0 ID=cds-WP_201745823.1;Parent=gene-LPH41_RS03920;Dbxref=Genbank:WP_201745823.1;Name=WP_201745823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS03920;product=hypothetical protein;protein_id=WP_201745823.1;transl_table=11 NZ_CP087680.1 RefSeq gene 846123 846548 . - . ID=gene-LPH41_RS03925;Name=LPH41_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03925;old_locus_tag=LPH41_03925 NZ_CP087680.1 Protein Homology CDS 846123 846548 . - 0 ID=cds-WP_200866205.1;Parent=gene-LPH41_RS03925;Dbxref=Genbank:WP_200866205.1;Name=WP_200866205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016246.2;locus_tag=LPH41_RS03925;product=DUF488 domain-containing protein;protein_id=WP_200866205.1;transl_table=11 NZ_CP087680.1 RefSeq gene 847105 849057 . - . ID=gene-LPH41_RS03930;Name=LPH41_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03930;old_locus_tag=LPH41_03930 NZ_CP087680.1 Protein Homology CDS 847105 849057 . - 0 ID=cds-WP_038272045.1;Parent=gene-LPH41_RS03930;Dbxref=Genbank:WP_038272045.1;Name=WP_038272045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097628.1;locus_tag=LPH41_RS03930;product=phospholipase D family protein;protein_id=WP_038272045.1;transl_table=11 NZ_CP087680.1 RefSeq gene 849054 849626 . - . ID=gene-LPH41_RS03935;Name=LPH41_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03935;old_locus_tag=LPH41_03935 NZ_CP087680.1 Protein Homology CDS 849054 849626 . - 0 ID=cds-WP_051482358.1;Parent=gene-LPH41_RS03935;Dbxref=Genbank:WP_051482358.1;Name=WP_051482358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355481.1;locus_tag=LPH41_RS03935;product=YceI family protein;protein_id=WP_051482358.1;transl_table=11 NZ_CP087680.1 RefSeq gene 849631 850107 . - . ID=gene-LPH41_RS03940;Name=LPH41_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03940;old_locus_tag=LPH41_03940 NZ_CP087680.1 Protein Homology CDS 849631 850107 . - 0 ID=cds-WP_038272079.1;Parent=gene-LPH41_RS03940;Dbxref=Genbank:WP_038272079.1;Name=WP_038272079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035432.1;locus_tag=LPH41_RS03940;product=histidine phosphatase family protein;protein_id=WP_038272079.1;transl_table=11 NZ_CP087680.1 RefSeq gene 850127 850759 . - . ID=gene-LPH41_RS03945;Name=LPH41_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03945;old_locus_tag=LPH41_03945 NZ_CP087680.1 Protein Homology CDS 850127 850759 . - 0 ID=cds-WP_038272043.1;Parent=gene-LPH41_RS03945;Dbxref=Genbank:WP_038272043.1;Name=WP_038272043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850972.1;locus_tag=LPH41_RS03945;product=ParA family protein;protein_id=WP_038272043.1;transl_table=11 NZ_CP087680.1 RefSeq gene 852083 853102 . - . ID=gene-LPH41_RS03950;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LPH41_RS03950;old_locus_tag=LPH41_03950 NZ_CP087680.1 Protein Homology CDS 852083 853102 . - 0 ID=cds-WP_038272041.1;Parent=gene-LPH41_RS03950;Dbxref=Genbank:WP_038272041.1;Name=WP_038272041.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085186.1;locus_tag=LPH41_RS03950;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_038272041.1;transl_table=11 NZ_CP087680.1 RefSeq gene 853099 854847 . - . ID=gene-LPH41_RS03955;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LPH41_RS03955;old_locus_tag=LPH41_03955 NZ_CP087680.1 Protein Homology CDS 853099 854847 . - 0 ID=cds-WP_038272039.1;Parent=gene-LPH41_RS03955;Dbxref=Genbank:WP_038272039.1;Name=WP_038272039.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851886.1;locus_tag=LPH41_RS03955;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_038272039.1;transl_table=11 NZ_CP087680.1 RefSeq gene 854865 855302 . - . ID=gene-LPH41_RS03960;Name=LPH41_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03960;old_locus_tag=LPH41_03960 NZ_CP087680.1 Protein Homology CDS 854865 855302 . - 0 ID=cds-WP_038272037.1;Parent=gene-LPH41_RS03960;Dbxref=Genbank:WP_038272037.1;Name=WP_038272037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237622.1;locus_tag=LPH41_RS03960;product=biopolymer transporter ExbD;protein_id=WP_038272037.1;transl_table=11 NZ_CP087680.1 RefSeq gene 855307 855972 . - . ID=gene-LPH41_RS03965;Name=LPH41_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03965;old_locus_tag=LPH41_03965 NZ_CP087680.1 Protein Homology CDS 855307 855972 . - 0 ID=cds-WP_038272035.1;Parent=gene-LPH41_RS03965;Dbxref=Genbank:WP_038272035.1;Name=WP_038272035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085189.1;locus_tag=LPH41_RS03965;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_038272035.1;transl_table=11 NZ_CP087680.1 RefSeq gene 855957 858356 . - . ID=gene-LPH41_RS03970;Name=LPH41_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03970;old_locus_tag=LPH41_03970 NZ_CP087680.1 Protein Homology CDS 855957 858356 . - 0 ID=cds-WP_230428274.1;Parent=gene-LPH41_RS03970;Dbxref=Genbank:WP_230428274.1;Name=WP_230428274.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851884.1;locus_tag=LPH41_RS03970;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_230428274.1;transl_table=11 NZ_CP087680.1 RefSeq gene 858938 859660 . - . ID=gene-LPH41_RS03975;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LPH41_RS03975;old_locus_tag=LPH41_03975 NZ_CP087680.1 Protein Homology CDS 858938 859660 . - 0 ID=cds-WP_038272030.1;Parent=gene-LPH41_RS03975;Dbxref=Genbank:WP_038272030.1;Name=WP_038272030.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089270.1;locus_tag=LPH41_RS03975;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_038272030.1;transl_table=11 NZ_CP087680.1 RefSeq gene 859653 860894 . - . ID=gene-LPH41_RS03980;Name=LPH41_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03980;old_locus_tag=LPH41_03980 NZ_CP087680.1 Protein Homology CDS 859653 860894 . - 0 ID=cds-WP_038272028.1;Parent=gene-LPH41_RS03980;Dbxref=Genbank:WP_038272028.1;Name=WP_038272028.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902586.1;locus_tag=LPH41_RS03980;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_038272028.1;transl_table=11 NZ_CP087680.1 RefSeq gene 860919 861371 . - . ID=gene-LPH41_RS03985;Name=LPH41_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03985;old_locus_tag=LPH41_03985 NZ_CP087680.1 Protein Homology CDS 860919 861371 . - 0 ID=cds-WP_230428497.1;Parent=gene-LPH41_RS03985;Dbxref=Genbank:WP_230428497.1;Name=WP_230428497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085193.1;locus_tag=LPH41_RS03985;product=hypothetical protein;protein_id=WP_230428497.1;transl_table=11 NZ_CP087680.1 RefSeq gene 861322 861570 . - . ID=gene-LPH41_RS03990;Name=LPH41_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03990;old_locus_tag=LPH41_03990 NZ_CP087680.1 Protein Homology CDS 861322 861570 . - 0 ID=cds-WP_038272025.1;Parent=gene-LPH41_RS03990;Dbxref=Genbank:WP_038272025.1;Name=WP_038272025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802215.1;locus_tag=LPH41_RS03990;product=succinate dehydrogenase assembly factor 2;protein_id=WP_038272025.1;transl_table=11 NZ_CP087680.1 RefSeq gene 861691 862476 . - . ID=gene-LPH41_RS03995;Name=LPH41_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS03995;old_locus_tag=LPH41_03995 NZ_CP087680.1 Protein Homology CDS 861691 862476 . - 0 ID=cds-WP_038272024.1;Parent=gene-LPH41_RS03995;Dbxref=Genbank:WP_038272024.1;Name=WP_038272024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037280.1;locus_tag=LPH41_RS03995;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_038272024.1;transl_table=11 NZ_CP087680.1 RefSeq gene 862497 864287 . - . ID=gene-LPH41_RS04000;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LPH41_RS04000;old_locus_tag=LPH41_04000 NZ_CP087680.1 Protein Homology CDS 862497 864287 . - 0 ID=cds-WP_038272023.1;Parent=gene-LPH41_RS04000;Dbxref=Genbank:WP_038272023.1;Name=WP_038272023.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851880.1;locus_tag=LPH41_RS04000;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_038272023.1;transl_table=11 NZ_CP087680.1 RefSeq gene 864295 864678 . - . ID=gene-LPH41_RS04005;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LPH41_RS04005;old_locus_tag=LPH41_04005 NZ_CP087680.1 Protein Homology CDS 864295 864678 . - 0 ID=cds-WP_038272022.1;Parent=gene-LPH41_RS04005;Dbxref=Genbank:WP_038272022.1;Name=WP_038272022.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893590.1;locus_tag=LPH41_RS04005;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_038272022.1;transl_table=11 NZ_CP087680.1 RefSeq gene 864675 865070 . - . ID=gene-LPH41_RS04010;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LPH41_RS04010;old_locus_tag=LPH41_04010 NZ_CP087680.1 Protein Homology CDS 864675 865070 . - 0 ID=cds-WP_081755467.1;Parent=gene-LPH41_RS04010;Dbxref=Genbank:WP_081755467.1;Name=WP_081755467.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089288.1;locus_tag=LPH41_RS04010;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_081755467.1;transl_table=11 NZ_CP087680.1 RefSeq gene 865128 865229 . - . ID=gene-LPH41_RS04015;Name=LPH41_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04015;old_locus_tag=LPH41_04015 NZ_CP087680.1 Protein Homology CDS 865128 865229 . - 0 ID=cds-WP_230428161.1;Parent=gene-LPH41_RS04015;Dbxref=Genbank:WP_230428161.1;Name=WP_230428161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019511.2;locus_tag=LPH41_RS04015;product=DUF1674 domain-containing protein;protein_id=WP_230428161.1;transl_table=11 NZ_CP087680.1 RefSeq gene 865587 866447 . + . ID=gene-LPH41_RS04020;Name=LPH41_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04020;old_locus_tag=LPH41_04020 NZ_CP087680.1 Protein Homology CDS 865587 866447 . + 0 ID=cds-WP_230428160.1;Parent=gene-LPH41_RS04020;Dbxref=Genbank:WP_230428160.1;Name=WP_230428160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355963.1;locus_tag=LPH41_RS04020;product=folate-binding protein;protein_id=WP_230428160.1;transl_table=11 NZ_CP087680.1 RefSeq gene 866598 867692 . - . ID=gene-LPH41_RS04025;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LPH41_RS04025;old_locus_tag=LPH41_04025 NZ_CP087680.1 Protein Homology CDS 866598 867692 . - 0 ID=cds-WP_038272021.1;Parent=gene-LPH41_RS04025;Dbxref=Genbank:WP_038272021.1;Name=WP_038272021.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337631.1;locus_tag=LPH41_RS04025;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_038272021.1;transl_table=11 NZ_CP087680.1 RefSeq gene 868014 869489 . + . ID=gene-LPH41_RS04030;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LPH41_RS04030;old_locus_tag=LPH41_04030 NZ_CP087680.1 Protein Homology CDS 868014 869489 . + 0 ID=cds-WP_230428273.1;Parent=gene-LPH41_RS04030;Dbxref=Genbank:WP_230428273.1;Name=WP_230428273.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090238.1;locus_tag=LPH41_RS04030;product=glucose-6-phosphate dehydrogenase;protein_id=WP_230428273.1;transl_table=11 NZ_CP087680.1 RefSeq gene 869486 870499 . + . ID=gene-LPH41_RS04035;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=LPH41_RS04035;old_locus_tag=LPH41_04035 NZ_CP087680.1 Protein Homology CDS 869486 870499 . + 0 ID=cds-WP_038272019.1;Parent=gene-LPH41_RS04035;Dbxref=Genbank:WP_038272019.1;Name=WP_038272019.1;Ontology_term=GO:0005975,GO:0004340;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085201.1;locus_tag=LPH41_RS04035;product=glucokinase;protein_id=WP_038272019.1;transl_table=11 NZ_CP087680.1 RefSeq gene 870496 871215 . + . ID=gene-LPH41_RS04040;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LPH41_RS04040;old_locus_tag=LPH41_04040 NZ_CP087680.1 Protein Homology CDS 870496 871215 . + 0 ID=cds-WP_038272018.1;Parent=gene-LPH41_RS04040;Dbxref=Genbank:WP_038272018.1;Name=WP_038272018.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090237.1;locus_tag=LPH41_RS04040;product=6-phosphogluconolactonase;protein_id=WP_038272018.1;transl_table=11 NZ_CP087680.1 RefSeq gene 871362 873278 . + . ID=gene-LPH41_RS04045;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LPH41_RS04045;old_locus_tag=LPH41_04045 NZ_CP087680.1 Protein Homology CDS 871362 873278 . + 0 ID=cds-WP_038272017.1;Parent=gene-LPH41_RS04045;Dbxref=Genbank:WP_038272017.1;Name=WP_038272017.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085203.1;locus_tag=LPH41_RS04045;product=phosphogluconate dehydratase;protein_id=WP_038272017.1;transl_table=11 NZ_CP087680.1 RefSeq gene 873370 874029 . + . ID=gene-LPH41_RS04050;Name=LPH41_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04050;old_locus_tag=LPH41_04050 NZ_CP087680.1 Protein Homology CDS 873370 874029 . + 0 ID=cds-WP_038272015.1;Parent=gene-LPH41_RS04050;Dbxref=Genbank:WP_038272015.1;Name=WP_038272015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355957.1;locus_tag=LPH41_RS04050;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_038272015.1;transl_table=11 NZ_CP087680.1 RefSeq gene 875068 875143 . + . ID=gene-LPH41_RS04055;Name=LPH41_RS04055;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS04055;old_locus_tag=LPH41_04055 NZ_CP087680.1 tRNAscan-SE tRNA 875068 875143 . + . ID=rna-LPH41_RS04055;Parent=gene-LPH41_RS04055;anticodon=(pos:875101..875103);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04055;product=tRNA-Ala NZ_CP087680.1 tRNAscan-SE exon 875068 875143 . + . ID=exon-LPH41_RS04055-1;Parent=rna-LPH41_RS04055;anticodon=(pos:875101..875103);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04055;product=tRNA-Ala NZ_CP087680.1 RefSeq gene 875197 875272 . + . ID=gene-LPH41_RS04060;Name=LPH41_RS04060;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS04060;old_locus_tag=LPH41_04060 NZ_CP087680.1 tRNAscan-SE tRNA 875197 875272 . + . ID=rna-LPH41_RS04060;Parent=gene-LPH41_RS04060;anticodon=(pos:875231..875233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04060;product=tRNA-Glu NZ_CP087680.1 tRNAscan-SE exon 875197 875272 . + . ID=exon-LPH41_RS04060-1;Parent=rna-LPH41_RS04060;anticodon=(pos:875231..875233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04060;product=tRNA-Glu NZ_CP087680.1 RefSeq gene 875397 875483 . + . ID=gene-LPH41_RS04065;Name=LPH41_RS04065;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS04065;old_locus_tag=LPH41_04065 NZ_CP087680.1 tRNAscan-SE tRNA 875397 875483 . + . ID=rna-LPH41_RS04065;Parent=gene-LPH41_RS04065;anticodon=(pos:875431..875433);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04065;product=tRNA-Leu NZ_CP087680.1 tRNAscan-SE exon 875397 875483 . + . ID=exon-LPH41_RS04065-1;Parent=rna-LPH41_RS04065;anticodon=(pos:875431..875433);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04065;product=tRNA-Leu NZ_CP087680.1 RefSeq gene 876403 876771 . - . ID=gene-LPH41_RS04070;Name=LPH41_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04070;old_locus_tag=LPH41_04070 NZ_CP087680.1 Protein Homology CDS 876403 876771 . - 0 ID=cds-WP_230428159.1;Parent=gene-LPH41_RS04070;Dbxref=Genbank:WP_230428159.1;Name=WP_230428159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636902.1;locus_tag=LPH41_RS04070;product=hypothetical protein;protein_id=WP_230428159.1;transl_table=11 NZ_CP087680.1 RefSeq gene 876771 877031 . - . ID=gene-LPH41_RS04075;Name=LPH41_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04075;old_locus_tag=LPH41_04075 NZ_CP087680.1 GeneMarkS-2+ CDS 876771 877031 . - 0 ID=cds-WP_038272011.1;Parent=gene-LPH41_RS04075;Dbxref=Genbank:WP_038272011.1;Name=WP_038272011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04075;product=hypothetical protein;protein_id=WP_038272011.1;transl_table=11 NZ_CP087680.1 RefSeq gene 877024 877200 . - . ID=gene-LPH41_RS04080;Name=LPH41_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04080;old_locus_tag=LPH41_04080 NZ_CP087680.1 Protein Homology CDS 877024 877200 . - 0 ID=cds-WP_171898044.1;Parent=gene-LPH41_RS04080;Dbxref=Genbank:WP_171898044.1;Name=WP_171898044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922230.1;locus_tag=LPH41_RS04080;product=hypothetical protein;protein_id=WP_171898044.1;transl_table=11 NZ_CP087680.1 RefSeq gene 877193 877627 . - . ID=gene-LPH41_RS04085;Name=LPH41_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04085;old_locus_tag=LPH41_04085 NZ_CP087680.1 GeneMarkS-2+ CDS 877193 877627 . - 0 ID=cds-WP_038272009.1;Parent=gene-LPH41_RS04085;Dbxref=Genbank:WP_038272009.1;Name=WP_038272009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04085;product=hypothetical protein;protein_id=WP_038272009.1;transl_table=11 NZ_CP087680.1 RefSeq gene 877887 879392 . - . ID=gene-LPH41_RS04090;Name=LPH41_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04090;old_locus_tag=LPH41_04090 NZ_CP087680.1 GeneMarkS-2+ CDS 877887 879392 . - 0 ID=cds-WP_038272007.1;Parent=gene-LPH41_RS04090;Dbxref=Genbank:WP_038272007.1;Name=WP_038272007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04090;product=hypothetical protein;protein_id=WP_038272007.1;transl_table=11 NZ_CP087680.1 RefSeq gene 879394 879909 . - . ID=gene-LPH41_RS04095;Name=LPH41_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04095;old_locus_tag=LPH41_04095 NZ_CP087680.1 GeneMarkS-2+ CDS 879394 879909 . - 0 ID=cds-WP_038272005.1;Parent=gene-LPH41_RS04095;Dbxref=Genbank:WP_038272005.1;Name=WP_038272005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04095;product=hypothetical protein;protein_id=WP_038272005.1;transl_table=11 NZ_CP087680.1 RefSeq gene 880001 880336 . - . ID=gene-LPH41_RS04100;Name=LPH41_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04100;old_locus_tag=LPH41_04100 NZ_CP087680.1 GeneMarkS-2+ CDS 880001 880336 . - 0 ID=cds-WP_038272003.1;Parent=gene-LPH41_RS04100;Dbxref=Genbank:WP_038272003.1;Name=WP_038272003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04100;product=hypothetical protein;protein_id=WP_038272003.1;transl_table=11 NZ_CP087680.1 RefSeq gene 880593 880808 . - . ID=gene-LPH41_RS04105;Name=LPH41_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04105;old_locus_tag=LPH41_04105 NZ_CP087680.1 Protein Homology CDS 880593 880808 . - 0 ID=cds-WP_038272001.1;Parent=gene-LPH41_RS04105;Dbxref=Genbank:WP_038272001.1;Name=WP_038272001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922212.1;locus_tag=LPH41_RS04105;product=hypothetical protein;protein_id=WP_038272001.1;transl_table=11 NZ_CP087680.1 RefSeq gene 880869 881330 . + . ID=gene-LPH41_RS04110;Name=LPH41_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04110;old_locus_tag=LPH41_04110 NZ_CP087680.1 Protein Homology CDS 880869 881330 . + 0 ID=cds-WP_069636215.1;Parent=gene-LPH41_RS04110;Dbxref=Genbank:WP_069636215.1;Name=WP_069636215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=LPH41_RS04110;product=helix-turn-helix transcriptional regulator;protein_id=WP_069636215.1;transl_table=11 NZ_CP087680.1 RefSeq gene 881660 881893 . - . ID=gene-LPH41_RS04115;Name=LPH41_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04115;old_locus_tag=LPH41_04115 NZ_CP087680.1 GeneMarkS-2+ CDS 881660 881893 . - 0 ID=cds-WP_038271999.1;Parent=gene-LPH41_RS04115;Dbxref=Genbank:WP_038271999.1;Name=WP_038271999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04115;product=hypothetical protein;protein_id=WP_038271999.1;transl_table=11 NZ_CP087680.1 RefSeq gene 882113 882292 . + . ID=gene-LPH41_RS04120;Name=LPH41_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04120;old_locus_tag=LPH41_04120 NZ_CP087680.1 GeneMarkS-2+ CDS 882113 882292 . + 0 ID=cds-WP_160165204.1;Parent=gene-LPH41_RS04120;Dbxref=Genbank:WP_160165204.1;Name=WP_160165204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04120;product=hypothetical protein;protein_id=WP_160165204.1;transl_table=11 NZ_CP087680.1 RefSeq gene 884035 884766 . + . ID=gene-LPH41_RS04125;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LPH41_RS04125;old_locus_tag=LPH41_04125 NZ_CP087680.1 Protein Homology CDS 884035 884766 . + 0 ID=cds-WP_038271995.1;Parent=gene-LPH41_RS04125;Dbxref=Genbank:WP_038271995.1;Name=WP_038271995.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851871.1;locus_tag=LPH41_RS04125;product=UMP kinase;protein_id=WP_038271995.1;transl_table=11 NZ_CP087680.1 RefSeq gene 885643 886443 . + . ID=gene-LPH41_RS04130;Name=LPH41_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04130;old_locus_tag=LPH41_04130 NZ_CP087680.1 Protein Homology CDS 885643 886443 . + 0 ID=cds-WP_038273060.1;Parent=gene-LPH41_RS04130;Dbxref=Genbank:WP_038273060.1;Name=WP_038273060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806608.1;locus_tag=LPH41_RS04130;product=ferritin-like domain-containing protein;protein_id=WP_038273060.1;transl_table=11 NZ_CP087680.1 RefSeq gene 886897 887246 . - . ID=gene-LPH41_RS04135;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LPH41_RS04135;old_locus_tag=LPH41_04135 NZ_CP087680.1 cmsearch RNase_P_RNA 886897 887246 . - . ID=rna-LPH41_RS04135;Parent=gene-LPH41_RS04135;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS04135;product=RNase P RNA component class A NZ_CP087680.1 cmsearch exon 886897 887246 . - . ID=exon-LPH41_RS04135-1;Parent=rna-LPH41_RS04135;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS04135;product=RNase P RNA component class A NZ_CP087680.1 RefSeq gene 888002 888322 . - . ID=gene-LPH41_RS04140;Name=LPH41_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04140;old_locus_tag=LPH41_04140 NZ_CP087680.1 Protein Homology CDS 888002 888322 . - 0 ID=cds-WP_038273062.1;Parent=gene-LPH41_RS04140;Dbxref=Genbank:WP_038273062.1;Name=WP_038273062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088873.1;locus_tag=LPH41_RS04140;product=DUF1820 family protein;protein_id=WP_038273062.1;transl_table=11 NZ_CP087680.1 RefSeq gene 888419 889111 . - . ID=gene-LPH41_RS04145;Name=LPH41_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04145;old_locus_tag=LPH41_04145 NZ_CP087680.1 Protein Homology CDS 888419 889111 . - 0 ID=cds-WP_038273064.1;Parent=gene-LPH41_RS04145;Dbxref=Genbank:WP_038273064.1;Name=WP_038273064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301614.1;locus_tag=LPH41_RS04145;product=rhomboid family intramembrane serine protease;protein_id=WP_038273064.1;transl_table=11 NZ_CP087680.1 RefSeq gene 889325 890656 . + . ID=gene-LPH41_RS04150;Name=LPH41_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04150;old_locus_tag=LPH41_04150 NZ_CP087680.1 Protein Homology CDS 889325 890656 . + 0 ID=cds-WP_051482394.1;Parent=gene-LPH41_RS04150;Dbxref=Genbank:WP_051482394.1;Name=WP_051482394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851867.1;locus_tag=LPH41_RS04150;product=outer membrane protein transport protein;protein_id=WP_051482394.1;transl_table=11 NZ_CP087680.1 RefSeq gene 891749 891898 . - . ID=gene-LPH41_RS04155;Name=LPH41_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04155;old_locus_tag=LPH41_04155 NZ_CP087680.1 GeneMarkS-2+ CDS 891749 891898 . - 0 ID=cds-WP_162814083.1;Parent=gene-LPH41_RS04155;Dbxref=Genbank:WP_162814083.1;Name=WP_162814083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04155;product=hypothetical protein;protein_id=WP_162814083.1;transl_table=11 NZ_CP087680.1 RefSeq gene 893831 894388 . + . ID=gene-LPH41_RS04160;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LPH41_RS04160;old_locus_tag=LPH41_04160 NZ_CP087680.1 Protein Homology CDS 893831 894388 . + 0 ID=cds-WP_038272416.1;Parent=gene-LPH41_RS04160;Dbxref=Genbank:WP_038272416.1;Name=WP_038272416.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036562.1;locus_tag=LPH41_RS04160;product=ribosome recycling factor;protein_id=WP_038272416.1;transl_table=11 NZ_CP087680.1 RefSeq gene 894412 895158 . + . ID=gene-LPH41_RS04165;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LPH41_RS04165;old_locus_tag=LPH41_04165 NZ_CP087680.1 Protein Homology CDS 894412 895158 . + 0 ID=cds-WP_171898071.1;Parent=gene-LPH41_RS04165;Dbxref=Genbank:WP_171898071.1;Name=WP_171898071.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346894.1;locus_tag=LPH41_RS04165;product=polyprenyl diphosphate synthase;protein_id=WP_171898071.1;transl_table=11 NZ_CP087680.1 RefSeq gene 895155 896009 . + . ID=gene-LPH41_RS04170;Name=LPH41_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04170;old_locus_tag=LPH41_04170 NZ_CP087680.1 Protein Homology CDS 895155 896009 . + 0 ID=cds-WP_038272419.1;Parent=gene-LPH41_RS04170;Dbxref=Genbank:WP_038272419.1;Name=WP_038272419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258695.1;locus_tag=LPH41_RS04170;product=phosphatidate cytidylyltransferase;protein_id=WP_038272419.1;transl_table=11 NZ_CP087680.1 RefSeq gene 896012 897196 . + . ID=gene-LPH41_RS04175;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=LPH41_RS04175;old_locus_tag=LPH41_04175 NZ_CP087680.1 Protein Homology CDS 896012 897196 . + 0 ID=cds-WP_038272421.1;Parent=gene-LPH41_RS04175;Dbxref=Genbank:WP_038272421.1;Name=WP_038272421.1;Ontology_term=GO:0019288,GO:0030604,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851863.1;locus_tag=LPH41_RS04175;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_038272421.1;transl_table=11 NZ_CP087680.1 RefSeq gene 897227 898561 . + . ID=gene-LPH41_RS04180;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LPH41_RS04180;old_locus_tag=LPH41_04180 NZ_CP087680.1 Protein Homology CDS 897227 898561 . + 0 ID=cds-WP_038272423.1;Parent=gene-LPH41_RS04180;Dbxref=Genbank:WP_038272423.1;Name=WP_038272423.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089328.1;locus_tag=LPH41_RS04180;product=RIP metalloprotease RseP;protein_id=WP_038272423.1;transl_table=11 NZ_CP087680.1 RefSeq gene 898656 901010 . + . ID=gene-LPH41_RS04185;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LPH41_RS04185;old_locus_tag=LPH41_04185 NZ_CP087680.1 Protein Homology CDS 898656 901010 . + 0 ID=cds-WP_038272425.1;Parent=gene-LPH41_RS04185;Dbxref=Genbank:WP_038272425.1;Name=WP_038272425.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117511.1;locus_tag=LPH41_RS04185;product=outer membrane protein assembly factor BamA;protein_id=WP_038272425.1;transl_table=11 NZ_CP087680.1 RefSeq gene 901209 902225 . + . ID=gene-LPH41_RS04190;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LPH41_RS04190;old_locus_tag=LPH41_04190 NZ_CP087680.1 Protein Homology CDS 901209 902225 . + 0 ID=cds-WP_038272427.1;Parent=gene-LPH41_RS04190;Dbxref=Genbank:WP_038272427.1;Name=WP_038272427.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089333.1;locus_tag=LPH41_RS04190;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_038272427.1;transl_table=11 NZ_CP087680.1 RefSeq gene 902222 902704 . + . ID=gene-LPH41_RS04195;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LPH41_RS04195;old_locus_tag=LPH41_04195 NZ_CP087680.1 Protein Homology CDS 902222 902704 . + 0 ID=cds-WP_038272429.1;Parent=gene-LPH41_RS04195;Dbxref=Genbank:WP_038272429.1;Name=WP_038272429.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085217.1;locus_tag=LPH41_RS04195;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_038272429.1;transl_table=11 NZ_CP087680.1 RefSeq gene 902726 903517 . + . ID=gene-LPH41_RS04200;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LPH41_RS04200;old_locus_tag=LPH41_04200 NZ_CP087680.1 Protein Homology CDS 902726 903517 . + 0 ID=cds-WP_038272431.1;Parent=gene-LPH41_RS04200;Dbxref=Genbank:WP_038272431.1;Name=WP_038272431.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507232.1;locus_tag=LPH41_RS04200;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_038272431.1;transl_table=11 NZ_CP087680.1 RefSeq gene 903594 904823 . + . ID=gene-LPH41_RS04205;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LPH41_RS04205;old_locus_tag=LPH41_04205 NZ_CP087680.1 Protein Homology CDS 903594 904823 . + 0 ID=cds-WP_051482370.1;Parent=gene-LPH41_RS04205;Dbxref=Genbank:WP_051482370.1;Name=WP_051482370.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893561.1;locus_tag=LPH41_RS04205;product=lipid-A-disaccharide synthase;protein_id=WP_051482370.1;transl_table=11 NZ_CP087680.1 RefSeq gene 904807 905484 . + . ID=gene-LPH41_RS04210;Name=LPH41_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04210;old_locus_tag=LPH41_04210 NZ_CP087680.1 Protein Homology CDS 904807 905484 . + 0 ID=cds-WP_038272433.1;Parent=gene-LPH41_RS04210;Dbxref=Genbank:WP_038272433.1;Name=WP_038272433.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851856.1;locus_tag=LPH41_RS04210;product=ribonuclease HII;protein_id=WP_038272433.1;transl_table=11 NZ_CP087680.1 RefSeq gene 906599 907951 . - . ID=gene-LPH41_RS04215;Name=LPH41_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04215;old_locus_tag=LPH41_04215 NZ_CP087680.1 Protein Homology CDS 906599 907951 . - 0 ID=cds-WP_038272456.1;Parent=gene-LPH41_RS04215;Dbxref=Genbank:WP_038272456.1;Name=WP_038272456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851854.1;locus_tag=LPH41_RS04215;product=AMP-binding protein;protein_id=WP_038272456.1;transl_table=11 NZ_CP087680.1 RefSeq gene 908303 908554 . + . ID=gene-LPH41_RS04220;Name=LPH41_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04220;old_locus_tag=LPH41_04220 NZ_CP087680.1 GeneMarkS-2+ CDS 908303 908554 . + 0 ID=cds-WP_114867066.1;Parent=gene-LPH41_RS04220;Dbxref=Genbank:WP_114867066.1;Name=WP_114867066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04220;product=hypothetical protein;protein_id=WP_114867066.1;transl_table=11 NZ_CP087680.1 cmsearch riboswitch 909941 910028 . + . ID=id-NZ_CP087680.1:909941..910028;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087680.1 RefSeq gene 910069 911511 . + . ID=gene-LPH41_RS04225;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LPH41_RS04225;old_locus_tag=LPH41_04225 NZ_CP087680.1 Protein Homology CDS 910069 911511 . + 0 ID=cds-WP_038272437.1;Parent=gene-LPH41_RS04225;Dbxref=Genbank:WP_038272437.1;Name=WP_038272437.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035988.1;locus_tag=LPH41_RS04225;product=adenosylhomocysteinase;protein_id=WP_038272437.1;transl_table=11 NZ_CP087680.1 RefSeq gene 911943 914969 . - . ID=gene-LPH41_RS04230;Name=LPH41_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04230;old_locus_tag=LPH41_04230 NZ_CP087680.1 Protein Homology CDS 911943 914969 . - 0 ID=cds-WP_038272440.1;Parent=gene-LPH41_RS04230;Dbxref=Genbank:WP_038272440.1;Name=WP_038272440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085223.1;locus_tag=LPH41_RS04230;product=TonB-dependent receptor;protein_id=WP_038272440.1;transl_table=11 NZ_CP087680.1 RefSeq gene 917382 919973 . + . ID=gene-LPH41_RS04235;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LPH41_RS04235;old_locus_tag=LPH41_04235 NZ_CP087680.1 Protein Homology CDS 917382 919973 . + 0 ID=cds-WP_038272444.1;Parent=gene-LPH41_RS04235;Dbxref=Genbank:WP_038272444.1;Name=WP_038272444.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085224.1;locus_tag=LPH41_RS04235;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_038272444.1;transl_table=11 NZ_CP087680.1 RefSeq gene 921129 921338 . - . ID=gene-LPH41_RS04240;Name=LPH41_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04240;old_locus_tag=LPH41_04240 NZ_CP087680.1 GeneMarkS-2+ CDS 921129 921338 . - 0 ID=cds-WP_038272446.1;Parent=gene-LPH41_RS04240;Dbxref=Genbank:WP_038272446.1;Name=WP_038272446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04240;product=hypothetical protein;protein_id=WP_038272446.1;transl_table=11 NZ_CP087680.1 RefSeq gene 921812 921988 . - . ID=gene-LPH41_RS04245;Name=LPH41_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04245;old_locus_tag=LPH41_04245 NZ_CP087680.1 GeneMarkS-2+ CDS 921812 921988 . - 0 ID=cds-WP_171898043.1;Parent=gene-LPH41_RS04245;Dbxref=Genbank:WP_171898043.1;Name=WP_171898043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04245;product=hypothetical protein;protein_id=WP_171898043.1;transl_table=11 NZ_CP087680.1 RefSeq gene 922517 924478 . + . ID=gene-LPH41_RS04250;Name=LPH41_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04250;old_locus_tag=LPH41_04250 NZ_CP087680.1 Protein Homology CDS 922517 924478 . + 0 ID=cds-WP_038272448.1;Parent=gene-LPH41_RS04250;Dbxref=Genbank:WP_038272448.1;Name=WP_038272448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893548.1;locus_tag=LPH41_RS04250;product=CocE/NonD family hydrolase;protein_id=WP_038272448.1;transl_table=11 NZ_CP087680.1 RefSeq gene 924475 924681 . + . ID=gene-LPH41_RS04255;Name=LPH41_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04255;old_locus_tag=LPH41_04255 NZ_CP087680.1 GeneMarkS-2+ CDS 924475 924681 . + 0 ID=cds-WP_038272450.1;Parent=gene-LPH41_RS04255;Dbxref=Genbank:WP_038272450.1;Name=WP_038272450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04255;product=hypothetical protein;protein_id=WP_038272450.1;transl_table=11 NZ_CP087680.1 RefSeq gene 926543 926639 . - . ID=gene-LPH41_RS04260;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LPH41_RS04260;old_locus_tag=LPH41_04260 NZ_CP087680.1 cmsearch SRP_RNA 926543 926639 . - . ID=rna-LPH41_RS04260;Parent=gene-LPH41_RS04260;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS04260;product=signal recognition particle sRNA small type NZ_CP087680.1 cmsearch exon 926543 926639 . - . ID=exon-LPH41_RS04260-1;Parent=rna-LPH41_RS04260;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS04260;product=signal recognition particle sRNA small type NZ_CP087680.1 RefSeq gene 927633 930314 . - . ID=gene-LPH41_RS04265;Name=LPH41_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04265;old_locus_tag=LPH41_04265 NZ_CP087680.1 Protein Homology CDS 927633 930314 . - 0 ID=cds-WP_230428158.1;Parent=gene-LPH41_RS04265;Dbxref=Genbank:WP_230428158.1;Name=WP_230428158.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607606.1;locus_tag=LPH41_RS04265;product=S8 family serine peptidase;protein_id=WP_230428158.1;transl_table=11 NZ_CP087680.1 RefSeq gene 930328 930780 . + . ID=gene-LPH41_RS04270;Name=LPH41_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04270;old_locus_tag=LPH41_04270 NZ_CP087680.1 GeneMarkS-2+ CDS 930328 930780 . + 0 ID=cds-WP_230428157.1;Parent=gene-LPH41_RS04270;Dbxref=Genbank:WP_230428157.1;Name=WP_230428157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04270;product=hypothetical protein;protein_id=WP_230428157.1;transl_table=11 NZ_CP087680.1 RefSeq gene 931136 931303 . + . ID=gene-LPH41_RS04275;Name=LPH41_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04275;old_locus_tag=LPH41_04275 NZ_CP087680.1 GeneMarkS-2+ CDS 931136 931303 . + 0 ID=cds-WP_160199297.1;Parent=gene-LPH41_RS04275;Dbxref=Genbank:WP_160199297.1;Name=WP_160199297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04275;product=hypothetical protein;protein_id=WP_160199297.1;transl_table=11 NZ_CP087680.1 RefSeq gene 931904 932215 . + . ID=gene-LPH41_RS04280;Name=LPH41_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04280;old_locus_tag=LPH41_04280 NZ_CP087680.1 Protein Homology CDS 931904 932215 . + 0 ID=cds-WP_038272945.1;Parent=gene-LPH41_RS04280;Dbxref=Genbank:WP_038272945.1;Name=WP_038272945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382447.1;locus_tag=LPH41_RS04280;product=hypothetical protein;protein_id=WP_038272945.1;transl_table=11 NZ_CP087680.1 RefSeq gene 933512 933700 . + . ID=gene-LPH41_RS04285;Name=LPH41_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04285;old_locus_tag=LPH41_04285 NZ_CP087680.1 GeneMarkS-2+ CDS 933512 933700 . + 0 ID=cds-WP_038272941.1;Parent=gene-LPH41_RS04285;Dbxref=Genbank:WP_038272941.1;Name=WP_038272941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04285;product=hypothetical protein;protein_id=WP_038272941.1;transl_table=11 NZ_CP087680.1 RefSeq gene 934407 935243 . + . ID=gene-LPH41_RS04290;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=LPH41_RS04290;old_locus_tag=LPH41_04290 NZ_CP087680.1 Protein Homology CDS 934407 935243 . + 0 ID=cds-WP_038272936.1;Parent=gene-LPH41_RS04290;Dbxref=Genbank:WP_038272936.1;Name=WP_038272936.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852933.1;locus_tag=LPH41_RS04290;product=acyl-CoA thioesterase II;protein_id=WP_038272936.1;transl_table=11 NZ_CP087680.1 RefSeq gene 935247 935738 . + . ID=gene-LPH41_RS04295;Name=LPH41_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04295;old_locus_tag=LPH41_04295 NZ_CP087680.1 Protein Homology CDS 935247 935738 . + 0 ID=cds-WP_038272934.1;Parent=gene-LPH41_RS04295;Dbxref=Genbank:WP_038272934.1;Name=WP_038272934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852934.1;locus_tag=LPH41_RS04295;product=DUF2007 domain-containing protein;protein_id=WP_038272934.1;transl_table=11 NZ_CP087680.1 RefSeq gene 936320 937123 . + . ID=gene-LPH41_RS04300;Name=LPH41_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04300;old_locus_tag=LPH41_04300 NZ_CP087680.1 Protein Homology CDS 936320 937123 . + 0 ID=cds-WP_051482390.1;Parent=gene-LPH41_RS04300;Dbxref=Genbank:WP_051482390.1;Name=WP_051482390.1;Ontology_term=GO:0016598,GO:0004057,GO:0008914;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA,leucyltransferase activity|0008914||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088071.1;locus_tag=LPH41_RS04300;product=arginyltransferase;protein_id=WP_051482390.1;transl_table=11 NZ_CP087680.1 RefSeq gene 937619 937750 . - . ID=gene-LPH41_RS11985;Name=LPH41_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11985 NZ_CP087680.1 GeneMarkS-2+ CDS 937619 937750 . - 0 ID=cds-WP_267903170.1;Parent=gene-LPH41_RS11985;Dbxref=Genbank:WP_267903170.1;Name=WP_267903170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11985;product=hypothetical protein;protein_id=WP_267903170.1;transl_table=11 NZ_CP087680.1 RefSeq gene 938940 939965 . - . ID=gene-LPH41_RS04305;Name=LPH41_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04305;old_locus_tag=LPH41_04305 NZ_CP087680.1 GeneMarkS-2+ CDS 938940 939965 . - 0 ID=cds-WP_200866218.1;Parent=gene-LPH41_RS04305;Dbxref=Genbank:WP_200866218.1;Name=WP_200866218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04305;product=DNA adenine methylase;protein_id=WP_200866218.1;transl_table=11 NZ_CP087680.1 RefSeq gene 940149 940796 . - . ID=gene-LPH41_RS04310;Name=LPH41_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04310;old_locus_tag=LPH41_04310 NZ_CP087680.1 Protein Homology CDS 940149 940796 . - 0 ID=cds-WP_051482389.1;Parent=gene-LPH41_RS04310;Dbxref=Genbank:WP_051482389.1;Name=WP_051482389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023605.2;locus_tag=LPH41_RS04310;product=NotI family restriction endonuclease;protein_id=WP_051482389.1;transl_table=11 NZ_CP087680.1 RefSeq gene 941728 943074 . - . ID=gene-LPH41_RS04315;Name=LPH41_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04315;old_locus_tag=LPH41_04315 NZ_CP087680.1 Protein Homology CDS 941728 943074 . - 0 ID=cds-WP_038272931.1;Parent=gene-LPH41_RS04315;Dbxref=Genbank:WP_038272931.1;Name=WP_038272931.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097583.1;locus_tag=LPH41_RS04315;product=Nramp family divalent metal transporter;protein_id=WP_038272931.1;transl_table=11 NZ_CP087680.1 RefSeq gene 943312 943794 . + . ID=gene-LPH41_RS04320;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=LPH41_RS04320;old_locus_tag=LPH41_04320 NZ_CP087680.1 Protein Homology CDS 943312 943794 . + 0 ID=cds-WP_038272949.1;Parent=gene-LPH41_RS04320;Dbxref=Genbank:WP_038272949.1;Name=WP_038272949.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097582.1;locus_tag=LPH41_RS04320;product=manganese-binding transcriptional regulator MntR;protein_id=WP_038272949.1;transl_table=11 NZ_CP087680.1 RefSeq gene 943802 944305 . + . ID=gene-LPH41_RS04325;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LPH41_RS04325;old_locus_tag=LPH41_04325 NZ_CP087680.1 Protein Homology CDS 943802 944305 . + 0 ID=cds-WP_051482387.1;Parent=gene-LPH41_RS04325;Dbxref=Genbank:WP_051482387.1;Name=WP_051482387.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852939.1;locus_tag=LPH41_RS04325;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_051482387.1;transl_table=11 NZ_CP087680.1 RefSeq gene 944548 948903 . - . ID=gene-LPH41_RS04330;Name=LPH41_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04330;old_locus_tag=LPH41_04330 NZ_CP087680.1 Protein Homology CDS 944548 948903 . - 0 ID=cds-WP_230439322.1;Parent=gene-LPH41_RS04330;Dbxref=Genbank:WP_230439322.1;Name=WP_230439322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097580.1;locus_tag=LPH41_RS04330;product=calcium-binding protein;protein_id=WP_230439322.1;transl_table=11 NZ_CP087680.1 RefSeq gene 948929 949435 . - . ID=gene-LPH41_RS04335;Name=LPH41_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04335;old_locus_tag=LPH41_04335 NZ_CP087680.1 Protein Homology CDS 948929 949435 . - 0 ID=cds-WP_038270723.1;Parent=gene-LPH41_RS04335;Dbxref=Genbank:WP_038270723.1;Name=WP_038270723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH41_RS04335;product=hypothetical protein;protein_id=WP_038270723.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 949699 949884 . - . ID=gene-LPH41_RS04340;Name=LPH41_RS04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04340;old_locus_tag=LPH41_04340;partial=true;pseudo=true;start_range=.,949699 NZ_CP087680.1 Protein Homology CDS 949699 949884 . - 0 ID=cds-LPH41_RS04340;Parent=gene-LPH41_RS04340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087883.1;locus_tag=LPH41_RS04340;partial=true;product=RTX toxin;pseudo=true;start_range=.,949699;transl_table=11 NZ_CP087680.1 RefSeq gene 949902 950411 . - . ID=gene-LPH41_RS04345;Name=LPH41_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04345;old_locus_tag=LPH41_04345 NZ_CP087680.1 Protein Homology CDS 949902 950411 . - 0 ID=cds-WP_038270724.1;Parent=gene-LPH41_RS04345;Dbxref=Genbank:WP_038270724.1;Name=WP_038270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH41_RS04345;product=hypothetical protein;protein_id=WP_038270724.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 950665 950859 . - . ID=gene-LPH41_RS04350;Name=LPH41_RS04350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04350;old_locus_tag=LPH41_04350;partial=true;pseudo=true;start_range=.,950665 NZ_CP087680.1 Protein Homology CDS 950665 950859 . - 0 ID=cds-LPH41_RS04350;Parent=gene-LPH41_RS04350;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337617.1;locus_tag=LPH41_RS04350;partial=true;product=RTX toxin;pseudo=true;start_range=.,950665;transl_table=11 NZ_CP087680.1 RefSeq gene 950877 951377 . - . ID=gene-LPH41_RS04355;Name=LPH41_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04355;old_locus_tag=LPH41_04355 NZ_CP087680.1 Protein Homology CDS 950877 951377 . - 0 ID=cds-WP_038270725.1;Parent=gene-LPH41_RS04355;Dbxref=Genbank:WP_038270725.1;Name=WP_038270725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087880.1;locus_tag=LPH41_RS04355;product=hypothetical protein;protein_id=WP_038270725.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 951723 952334 . + . ID=gene-LPH41_RS04360;Name=LPH41_RS04360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04360;old_locus_tag=LPH41_04360;partial=true;pseudo=true;start_range=.,951723 NZ_CP087680.1 Protein Homology CDS 951723 952334 . + 0 ID=cds-LPH41_RS04360;Parent=gene-LPH41_RS04360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894515.1;locus_tag=LPH41_RS04360;partial=true;product=toprim domain-containing protein;pseudo=true;start_range=.,951723;transl_table=11 NZ_CP087680.1 RefSeq gene 952339 952575 . + . ID=gene-LPH41_RS04365;Name=LPH41_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04365;old_locus_tag=LPH41_04365 NZ_CP087680.1 GeneMarkS-2+ CDS 952339 952575 . + 0 ID=cds-WP_152536590.1;Parent=gene-LPH41_RS04365;Dbxref=Genbank:WP_152536590.1;Name=WP_152536590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04365;product=hypothetical protein;protein_id=WP_152536590.1;transl_table=11 NZ_CP087680.1 RefSeq gene 952750 953217 . - . ID=gene-LPH41_RS04370;Name=LPH41_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04370;old_locus_tag=LPH41_04370 NZ_CP087680.1 Protein Homology CDS 952750 953217 . - 0 ID=cds-WP_230428272.1;Parent=gene-LPH41_RS04370;Dbxref=Genbank:WP_230428272.1;Name=WP_230428272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435588.1;locus_tag=LPH41_RS04370;product=recombinase family protein;protein_id=WP_230428272.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 953183 953329 . - . ID=gene-LPH41_RS04375;Name=LPH41_RS04375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04375;old_locus_tag=LPH41_04375;partial=true;pseudo=true;start_range=.,953183 NZ_CP087680.1 Protein Homology CDS 953183 953329 . - 0 ID=cds-LPH41_RS04375;Parent=gene-LPH41_RS04375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1;locus_tag=LPH41_RS04375;partial=true;product=nucleotidyltransferase;pseudo=true;start_range=.,953183;transl_table=11 NZ_CP087680.1 RefSeq gene 953396 954382 . - . ID=gene-LPH41_RS04380;Name=LPH41_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04380;old_locus_tag=LPH41_04380 NZ_CP087680.1 Protein Homology CDS 953396 954382 . - 0 ID=cds-WP_038270726.1;Parent=gene-LPH41_RS04380;Dbxref=Genbank:WP_038270726.1;Name=WP_038270726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011979481.1;locus_tag=LPH41_RS04380;product=caspase family protein;protein_id=WP_038270726.1;transl_table=11 NZ_CP087680.1 RefSeq gene 954382 954753 . - . ID=gene-LPH41_RS04385;Name=LPH41_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04385;old_locus_tag=LPH41_04385 NZ_CP087680.1 Protein Homology CDS 954382 954753 . - 0 ID=cds-WP_038270728.1;Parent=gene-LPH41_RS04385;Dbxref=Genbank:WP_038270728.1;Name=WP_038270728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019465260.1;locus_tag=LPH41_RS04385;product=TIR domain-containing protein;protein_id=WP_038270728.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 954895 956206 . - . ID=gene-LPH41_RS04390;Name=LPH41_RS04390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04390;old_locus_tag=LPH41_04390;partial=true;pseudo=true;start_range=.,954895 NZ_CP087680.1 Protein Homology CDS 954895 956206 . - 0 ID=cds-LPH41_RS04390;Parent=gene-LPH41_RS04390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015060658.1;locus_tag=LPH41_RS04390;partial=true;product=DUF4158 domain-containing protein;pseudo=true;start_range=.,954895;transl_table=11 NZ_CP087680.1 RefSeq gene 956203 956796 . - . ID=gene-LPH41_RS04395;Name=LPH41_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04395;old_locus_tag=LPH41_04395 NZ_CP087680.1 Protein Homology CDS 956203 956796 . - 0 ID=cds-WP_038270729.1;Parent=gene-LPH41_RS04395;Dbxref=Genbank:WP_038270729.1;Name=WP_038270729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435588.1;locus_tag=LPH41_RS04395;product=recombinase family protein;protein_id=WP_038270729.1;transl_table=11 NZ_CP087680.1 RefSeq gene 957019 957270 . + . ID=gene-LPH41_RS04400;Name=LPH41_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04400;old_locus_tag=LPH41_04400 NZ_CP087680.1 Protein Homology CDS 957019 957270 . + 0 ID=cds-WP_038270730.1;Parent=gene-LPH41_RS04400;Dbxref=Genbank:WP_038270730.1;Name=WP_038270730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167341.1;locus_tag=LPH41_RS04400;product=antitoxin;protein_id=WP_038270730.1;transl_table=11 NZ_CP087680.1 RefSeq gene 957267 957578 . + . ID=gene-LPH41_RS04405;Name=LPH41_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04405;old_locus_tag=LPH41_04405 NZ_CP087680.1 Protein Homology CDS 957267 957578 . + 0 ID=cds-WP_038270731.1;Parent=gene-LPH41_RS04405;Dbxref=Genbank:WP_038270731.1;Name=WP_038270731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850413.1;locus_tag=LPH41_RS04405;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038270731.1;transl_table=11 NZ_CP087680.1 RefSeq gene 957606 958523 . - . ID=gene-LPH41_RS04410;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LPH41_RS04410;old_locus_tag=LPH41_04410 NZ_CP087680.1 Protein Homology CDS 957606 958523 . - 0 ID=cds-WP_038270732.1;Parent=gene-LPH41_RS04410;Dbxref=Genbank:WP_038270732.1;Name=WP_038270732.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020203122.1;locus_tag=LPH41_RS04410;product=transcriptional regulator GcvA;protein_id=WP_038270732.1;transl_table=11 NZ_CP087680.1 RefSeq gene 958721 959494 . + . ID=gene-LPH41_RS04415;Name=LPH41_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04415;old_locus_tag=LPH41_04415 NZ_CP087680.1 Protein Homology CDS 958721 959494 . + 0 ID=cds-WP_038270733.1;Parent=gene-LPH41_RS04415;Dbxref=Genbank:WP_038270733.1;Name=WP_038270733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020203121.1;locus_tag=LPH41_RS04415;product=SDR family oxidoreductase;protein_id=WP_038270733.1;transl_table=11 NZ_CP087680.1 RefSeq gene 959560 959853 . + . ID=gene-LPH41_RS04420;Name=LPH41_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04420;old_locus_tag=LPH41_04420 NZ_CP087680.1 GeneMarkS-2+ CDS 959560 959853 . + 0 ID=cds-WP_200866185.1;Parent=gene-LPH41_RS04420;Dbxref=Genbank:WP_200866185.1;Name=WP_200866185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04420;product=hypothetical protein;protein_id=WP_200866185.1;transl_table=11 NZ_CP087680.1 RefSeq gene 959850 960383 . + . ID=gene-LPH41_RS04425;Name=LPH41_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04425;old_locus_tag=LPH41_04425 NZ_CP087680.1 Protein Homology CDS 959850 960383 . + 0 ID=cds-WP_038270735.1;Parent=gene-LPH41_RS04425;Dbxref=Genbank:WP_038270735.1;Name=WP_038270735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014608.2;locus_tag=LPH41_RS04425;product=OsmC family protein;protein_id=WP_038270735.1;transl_table=11 NZ_CP087680.1 RefSeq gene 960499 960840 . + . ID=gene-LPH41_RS04430;Name=LPH41_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04430;old_locus_tag=LPH41_04430 NZ_CP087680.1 Protein Homology CDS 960499 960840 . + 0 ID=cds-WP_200866190.1;Parent=gene-LPH41_RS04430;Dbxref=Genbank:WP_200866190.1;Name=WP_200866190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997683.1;locus_tag=LPH41_RS04430;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_200866190.1;transl_table=11 NZ_CP087680.1 RefSeq gene 960857 961579 . + . ID=gene-LPH41_RS04435;Name=LPH41_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04435;old_locus_tag=LPH41_04435 NZ_CP087680.1 Protein Homology CDS 960857 961579 . + 0 ID=cds-WP_230428156.1;Parent=gene-LPH41_RS04435;Dbxref=Genbank:WP_230428156.1;Name=WP_230428156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997681.1;locus_tag=LPH41_RS04435;product=cupin domain-containing protein;protein_id=WP_230428156.1;transl_table=11 NZ_CP087680.1 RefSeq gene 961576 963060 . + . ID=gene-LPH41_RS04440;Name=LPH41_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04440;old_locus_tag=LPH41_04440 NZ_CP087680.1 Protein Homology CDS 961576 963060 . + 0 ID=cds-WP_081755409.1;Parent=gene-LPH41_RS04440;Dbxref=Genbank:WP_081755409.1;Name=WP_081755409.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF024842.2;locus_tag=LPH41_RS04440;product=FAD-dependent oxidoreductase;protein_id=WP_081755409.1;transl_table=11 NZ_CP087680.1 RefSeq gene 963070 963678 . - . ID=gene-LPH41_RS04445;Name=LPH41_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04445;old_locus_tag=LPH41_04445 NZ_CP087680.1 Protein Homology CDS 963070 963678 . - 0 ID=cds-WP_038270737.1;Parent=gene-LPH41_RS04445;Dbxref=Genbank:WP_038270737.1;Name=WP_038270737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895232.1;locus_tag=LPH41_RS04445;product=transglycosylase SLT domain-containing protein;protein_id=WP_038270737.1;transl_table=11 NZ_CP087680.1 RefSeq gene 963680 963901 . - . ID=gene-LPH41_RS04450;Name=LPH41_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04450;old_locus_tag=LPH41_04450 NZ_CP087680.1 GeneMarkS-2+ CDS 963680 963901 . - 0 ID=cds-WP_038270739.1;Parent=gene-LPH41_RS04450;Dbxref=Genbank:WP_038270739.1;Name=WP_038270739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04450;product=hypothetical protein;protein_id=WP_038270739.1;transl_table=11 NZ_CP087680.1 RefSeq gene 963937 965385 . - . ID=gene-LPH41_RS04455;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=LPH41_RS04455;old_locus_tag=LPH41_04455 NZ_CP087680.1 Protein Homology CDS 963937 965385 . - 0 ID=cds-WP_230428155.1;Parent=gene-LPH41_RS04455;Dbxref=Genbank:WP_230428155.1;Name=WP_230428155.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894502.1;locus_tag=LPH41_RS04455;product=P-type conjugative transfer protein TrbL;protein_id=WP_230428155.1;transl_table=11 NZ_CP087680.1 RefSeq gene 965402 965638 . - . ID=gene-LPH41_RS04460;Name=LPH41_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04460;old_locus_tag=LPH41_04460 NZ_CP087680.1 Protein Homology CDS 965402 965638 . - 0 ID=cds-WP_081755410.1;Parent=gene-LPH41_RS04460;Dbxref=Genbank:WP_081755410.1;Name=WP_081755410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=LPH41_RS04460;product=EexN family lipoprotein;protein_id=WP_081755410.1;transl_table=11 NZ_CP087680.1 RefSeq gene 965655 966428 . - . ID=gene-LPH41_RS04465;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=LPH41_RS04465;old_locus_tag=LPH41_04465 NZ_CP087680.1 Protein Homology CDS 965655 966428 . - 0 ID=cds-WP_038270743.1;Parent=gene-LPH41_RS04465;Dbxref=Genbank:WP_038270743.1;Name=WP_038270743.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086702.1;locus_tag=LPH41_RS04465;product=P-type conjugative transfer protein TrbJ;protein_id=WP_038270743.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 966447 967301 . - . ID=gene-LPH41_RS04470;Name=LPH41_RS04470;end_range=967301,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04470;old_locus_tag=LPH41_04470;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 966447 967301 . - 0 ID=cds-LPH41_RS04470;Parent=gene-LPH41_RS04470;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=967301,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091515.1;locus_tag=LPH41_RS04470;partial=true;product=conjugal transfer protein TrbI;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 967339 967518 . - . ID=gene-LPH41_RS04475;Name=LPH41_RS04475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04475;old_locus_tag=LPH41_04475;partial=true;pseudo=true;start_range=.,967339 NZ_CP087680.1 Protein Homology CDS 967339 967518 . - 0 ID=cds-LPH41_RS04475;Parent=gene-LPH41_RS04475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018934.2;locus_tag=LPH41_RS04475;partial=true;product=conjugal transfer protein TrbH;pseudo=true;start_range=.,967339;transl_table=11 NZ_CP087680.1 RefSeq gene 967524 967736 . - . ID=gene-LPH41_RS04480;Name=LPH41_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04480;old_locus_tag=LPH41_04480 NZ_CP087680.1 Protein Homology CDS 967524 967736 . - 0 ID=cds-WP_230439323.1;Parent=gene-LPH41_RS04480;Dbxref=Genbank:WP_230439323.1;Name=WP_230439323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018934.2;locus_tag=LPH41_RS04480;product=hypothetical protein;protein_id=WP_230439323.1;transl_table=11 NZ_CP087680.1 RefSeq gene 967739 968629 . - . ID=gene-LPH41_RS04485;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=LPH41_RS04485;old_locus_tag=LPH41_04485 NZ_CP087680.1 Protein Homology CDS 967739 968629 . - 0 ID=cds-WP_038270744.1;Parent=gene-LPH41_RS04485;Dbxref=Genbank:WP_038270744.1;Name=WP_038270744.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbG;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086695.1;locus_tag=LPH41_RS04485;product=P-type conjugative transfer protein TrbG;protein_id=WP_038270744.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 968645 969482 . - . ID=gene-LPH41_RS04490;Name=LPH41_RS04490;end_range=969482,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04490;old_locus_tag=LPH41_04490;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 968645 969482 . - 0 ID=cds-LPH41_RS04490;Parent=gene-LPH41_RS04490;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;end_range=969482,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161248.1;locus_tag=LPH41_RS04490;partial=true;product=VirB8/TrbF family protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 969658 970787 . + . ID=gene-LPH41_RS04495;Name=LPH41_RS04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04495;old_locus_tag=LPH41_04495;partial=true;pseudo=true;start_range=.,969658 NZ_CP087680.1 Protein Homology CDS 969658 970787 . + 0 ID=cds-LPH41_RS04495;Parent=gene-LPH41_RS04495;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337797.1;locus_tag=LPH41_RS04495;partial=true;product=DUF5710 domain-containing protein;pseudo=true;start_range=.,969658;transl_table=11 NZ_CP087680.1 RefSeq gene 971057 971338 . - . ID=gene-LPH41_RS04500;Name=LPH41_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04500;old_locus_tag=LPH41_04500 NZ_CP087680.1 Protein Homology CDS 971057 971338 . - 0 ID=cds-WP_038270748.1;Parent=gene-LPH41_RS04500;Dbxref=Genbank:WP_038270748.1;Name=WP_038270748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091355.1;locus_tag=LPH41_RS04500;product=XRE family transcriptional regulator;protein_id=WP_038270748.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 971450 971533 . - . ID=gene-LPH41_RS04505;Name=LPH41_RS04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04505;old_locus_tag=LPH41_04505;partial=true;pseudo=true;start_range=.,971450 NZ_CP087680.1 Protein Homology CDS 971450 971533 . - 0 ID=cds-LPH41_RS04505;Parent=gene-LPH41_RS04505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017757.2;locus_tag=LPH41_RS04505;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,971450;transl_table=11 NZ_CP087680.1 RefSeq gene 971667 972047 . - . ID=gene-LPH41_RS04510;Name=LPH41_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04510;old_locus_tag=LPH41_04510 NZ_CP087680.1 GeneMarkS-2+ CDS 971667 972047 . - 0 ID=cds-WP_038270750.1;Parent=gene-LPH41_RS04510;Dbxref=Genbank:WP_038270750.1;Name=WP_038270750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04510;product=hypothetical protein;protein_id=WP_038270750.1;transl_table=11 NZ_CP087680.1 RefSeq gene 972176 972571 . - . ID=gene-LPH41_RS04515;Name=LPH41_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04515;old_locus_tag=LPH41_04515 NZ_CP087680.1 Protein Homology CDS 972176 972571 . - 0 ID=cds-WP_230428271.1;Parent=gene-LPH41_RS04515;Dbxref=Genbank:WP_230428271.1;Name=WP_230428271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025079.2;locus_tag=LPH41_RS04515;product=DUF4158 domain-containing protein;protein_id=WP_230428271.1;transl_table=11 NZ_CP087680.1 RefSeq gene 972815 973009 . + . ID=gene-LPH41_RS04520;Name=LPH41_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04520;old_locus_tag=LPH41_04520 NZ_CP087680.1 Protein Homology CDS 972815 973009 . + 0 ID=cds-WP_038270756.1;Parent=gene-LPH41_RS04520;Dbxref=Genbank:WP_038270756.1;Name=WP_038270756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408511.1;locus_tag=LPH41_RS04520;product=hypothetical protein;protein_id=WP_038270756.1;transl_table=11 NZ_CP087680.1 RefSeq gene 973006 973209 . + . ID=gene-LPH41_RS04525;Name=LPH41_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04525;old_locus_tag=LPH41_04525 NZ_CP087680.1 Protein Homology CDS 973006 973209 . + 0 ID=cds-WP_200866186.1;Parent=gene-LPH41_RS04525;Dbxref=Genbank:WP_200866186.1;Name=WP_200866186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=LPH41_RS04525;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_200866186.1;transl_table=11 NZ_CP087680.1 RefSeq gene 973344 973958 . + . ID=gene-LPH41_RS04530;Name=LPH41_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04530;old_locus_tag=LPH41_04530 NZ_CP087680.1 Protein Homology CDS 973344 973958 . + 0 ID=cds-WP_230428270.1;Parent=gene-LPH41_RS04530;Dbxref=Genbank:WP_230428270.1;Name=WP_230428270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LPH41_RS04530;product=recombinase family protein;protein_id=WP_230428270.1;transl_table=11 NZ_CP087680.1 RefSeq gene 974031 975422 . - . ID=gene-LPH41_RS04535;Name=LPH41_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04535;old_locus_tag=LPH41_04535 NZ_CP087680.1 Protein Homology CDS 974031 975422 . - 0 ID=cds-WP_051482280.1;Parent=gene-LPH41_RS04535;Dbxref=Genbank:WP_051482280.1;Name=WP_051482280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160583.1;locus_tag=LPH41_RS04535;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_051482280.1;transl_table=11 NZ_CP087680.1 RefSeq gene 976658 977668 . + . ID=gene-LPH41_RS04540;Name=LPH41_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04540;old_locus_tag=LPH41_04540 NZ_CP087680.1 Protein Homology CDS 976658 977668 . + 0 ID=cds-WP_038270757.1;Parent=gene-LPH41_RS04540;Dbxref=Genbank:WP_038270757.1;Name=WP_038270757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895227.1;locus_tag=LPH41_RS04540;product=serine protease;protein_id=WP_038270757.1;transl_table=11 NZ_CP087680.1 RefSeq gene 978055 978195 . - . ID=gene-LPH41_RS04545;Name=LPH41_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04545;old_locus_tag=LPH41_04545 NZ_CP087680.1 GeneMarkS-2+ CDS 978055 978195 . - 0 ID=cds-WP_160165149.1;Parent=gene-LPH41_RS04545;Dbxref=Genbank:WP_160165149.1;Name=WP_160165149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04545;product=hypothetical protein;protein_id=WP_160165149.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 978335 981158 . - . ID=gene-LPH41_RS04550;Name=LPH41_RS04550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS04550;old_locus_tag=LPH41_04550;partial=true;pseudo=true;start_range=.,978335 NZ_CP087680.1 Protein Homology CDS 978335 981158 . - 0 ID=cds-LPH41_RS04550;Parent=gene-LPH41_RS04550;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=LPH41_RS04550;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,978335;transl_table=11 NZ_CP087680.1 RefSeq gene 981161 981721 . - . ID=gene-LPH41_RS04555;Name=LPH41_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04555;old_locus_tag=LPH41_04555 NZ_CP087680.1 Protein Homology CDS 981161 981721 . - 0 ID=cds-WP_038270758.1;Parent=gene-LPH41_RS04555;Dbxref=Genbank:WP_038270758.1;Name=WP_038270758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220837.1;locus_tag=LPH41_RS04555;product=recombinase family protein;protein_id=WP_038270758.1;transl_table=11 NZ_CP087680.1 RefSeq gene 981945 982313 . - . ID=gene-LPH41_RS04560;Name=LPH41_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04560;old_locus_tag=LPH41_04560 NZ_CP087680.1 Protein Homology CDS 981945 982313 . - 0 ID=cds-WP_038270759.1;Parent=gene-LPH41_RS04560;Dbxref=Genbank:WP_038270759.1;Name=WP_038270759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH41_RS04560;product=hypothetical protein;protein_id=WP_038270759.1;transl_table=11 NZ_CP087680.1 RefSeq gene 983010 984257 . - . ID=gene-LPH41_RS04565;Name=LPH41_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04565;old_locus_tag=LPH41_04565 NZ_CP087680.1 Protein Homology CDS 983010 984257 . - 0 ID=cds-WP_038270853.1;Parent=gene-LPH41_RS04565;Dbxref=Genbank:WP_038270853.1;Name=WP_038270853.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910533.1;locus_tag=LPH41_RS04565;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_038270853.1;transl_table=11 NZ_CP087680.1 RefSeq gene 984711 985871 . - . ID=gene-LPH41_RS04570;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LPH41_RS04570;old_locus_tag=LPH41_04570 NZ_CP087680.1 Protein Homology CDS 984711 985871 . - 0 ID=cds-WP_038270760.1;Parent=gene-LPH41_RS04570;Dbxref=Genbank:WP_038270760.1;Name=WP_038270760.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051522.1;locus_tag=LPH41_RS04570;product=glutamate 5-kinase;protein_id=WP_038270760.1;transl_table=11 NZ_CP087680.1 RefSeq gene 985884 986033 . - . ID=gene-LPH41_RS04575;Name=LPH41_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04575;old_locus_tag=LPH41_04575 NZ_CP087680.1 GeneMarkS-2+ CDS 985884 986033 . - 0 ID=cds-WP_160165150.1;Parent=gene-LPH41_RS04575;Dbxref=Genbank:WP_160165150.1;Name=WP_160165150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04575;product=hypothetical protein;protein_id=WP_160165150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 986346 987674 . - . ID=gene-LPH41_RS04580;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LPH41_RS04580;old_locus_tag=LPH41_04580 NZ_CP087680.1 Protein Homology CDS 986346 987674 . - 0 ID=cds-WP_038270761.1;Parent=gene-LPH41_RS04580;Dbxref=Genbank:WP_038270761.1;Name=WP_038270761.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087890.1;locus_tag=LPH41_RS04580;product=argininosuccinate lyase;protein_id=WP_038270761.1;transl_table=11 NZ_CP087680.1 RefSeq gene 987751 988707 . - . ID=gene-LPH41_RS04585;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LPH41_RS04585;old_locus_tag=LPH41_04585 NZ_CP087680.1 Protein Homology CDS 987751 988707 . - 0 ID=cds-WP_038270762.1;Parent=gene-LPH41_RS04585;Dbxref=Genbank:WP_038270762.1;Name=WP_038270762.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006378490.1;locus_tag=LPH41_RS04585;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_038270762.1;transl_table=11 NZ_CP087680.1 RefSeq gene 988789 988989 . + . ID=gene-LPH41_RS04590;Name=LPH41_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04590;old_locus_tag=LPH41_04590 NZ_CP087680.1 GeneMarkS-2+ CDS 988789 988989 . + 0 ID=cds-WP_152536591.1;Parent=gene-LPH41_RS04590;Dbxref=Genbank:WP_152536591.1;Name=WP_152536591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04590;product=hypothetical protein;protein_id=WP_152536591.1;transl_table=11 NZ_CP087680.1 RefSeq gene 989018 990334 . - . ID=gene-LPH41_RS04595;Name=LPH41_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04595;old_locus_tag=LPH41_04595 NZ_CP087680.1 Protein Homology CDS 989018 990334 . - 0 ID=cds-WP_038270764.1;Parent=gene-LPH41_RS04595;Dbxref=Genbank:WP_038270764.1;Name=WP_038270764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085241.1;locus_tag=LPH41_RS04595;product=acetylglutamate kinase;protein_id=WP_038270764.1;transl_table=11 NZ_CP087680.1 RefSeq gene 990399 991490 . - . ID=gene-LPH41_RS04600;Name=LPH41_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04600;old_locus_tag=LPH41_04600 NZ_CP087680.1 Protein Homology CDS 990399 991490 . - 0 ID=cds-WP_038270765.1;Parent=gene-LPH41_RS04600;Dbxref=Genbank:WP_038270765.1;Name=WP_038270765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852343.1;locus_tag=LPH41_RS04600;product=acetylornithine deacetylase;protein_id=WP_038270765.1;transl_table=11 NZ_CP087680.1 RefSeq gene 992238 993443 . - . ID=gene-LPH41_RS04605;Name=LPH41_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04605;old_locus_tag=LPH41_04605 NZ_CP087680.1 Protein Homology CDS 992238 993443 . - 0 ID=cds-WP_038270767.1;Parent=gene-LPH41_RS04605;Dbxref=Genbank:WP_038270767.1;Name=WP_038270767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097576.1;locus_tag=LPH41_RS04605;product=argininosuccinate synthase;protein_id=WP_038270767.1;transl_table=11 NZ_CP087680.1 RefSeq gene 993472 994482 . - . ID=gene-LPH41_RS04610;Name=LPH41_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04610;old_locus_tag=LPH41_04610 NZ_CP087680.1 Protein Homology CDS 993472 994482 . - 0 ID=cds-WP_114867062.1;Parent=gene-LPH41_RS04610;Dbxref=Genbank:WP_114867062.1;Name=WP_114867062.1;Ontology_term=GO:0042450,GO:0016597,GO:0043857;gbkey=CDS;go_function=amino acid binding|0016597||IEA,N-acetylornithine carbamoyltransferase activity|0043857||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087894.1;locus_tag=LPH41_RS04610;product=N-acetylornithine carbamoyltransferase;protein_id=WP_114867062.1;transl_table=11 NZ_CP087680.1 RefSeq gene 994860 995402 . - . ID=gene-LPH41_RS04615;Name=LPH41_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04615;old_locus_tag=LPH41_04615 NZ_CP087680.1 Protein Homology CDS 994860 995402 . - 0 ID=cds-WP_038270769.1;Parent=gene-LPH41_RS04615;Dbxref=Genbank:WP_038270769.1;Name=WP_038270769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607601.1;locus_tag=LPH41_RS04615;product=hypothetical protein;protein_id=WP_038270769.1;transl_table=11 NZ_CP087680.1 RefSeq gene 995559 996959 . + . ID=gene-LPH41_RS04620;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LPH41_RS04620;old_locus_tag=LPH41_04620 NZ_CP087680.1 Protein Homology CDS 995559 996959 . + 0 ID=cds-WP_038270770.1;Parent=gene-LPH41_RS04620;Dbxref=Genbank:WP_038270770.1;Name=WP_038270770.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852341.1;locus_tag=LPH41_RS04620;product=cysteine--tRNA ligase;protein_id=WP_038270770.1;transl_table=11 NZ_CP087680.1 RefSeq gene 997178 997618 . + . ID=gene-LPH41_RS04625;Name=LPH41_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04625;old_locus_tag=LPH41_04625 NZ_CP087680.1 Protein Homology CDS 997178 997618 . + 0 ID=cds-WP_038270771.1;Parent=gene-LPH41_RS04625;Dbxref=Genbank:WP_038270771.1;Name=WP_038270771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087898.1;locus_tag=LPH41_RS04625;product=SufE family protein;protein_id=WP_038270771.1;transl_table=11 NZ_CP087680.1 RefSeq gene 997615 998859 . + . ID=gene-LPH41_RS04630;Name=LPH41_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04630;old_locus_tag=LPH41_04630 NZ_CP087680.1 Protein Homology CDS 997615 998859 . + 0 ID=cds-WP_038270772.1;Parent=gene-LPH41_RS04630;Dbxref=Genbank:WP_038270772.1;Name=WP_038270772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097573.1;locus_tag=LPH41_RS04630;product=MFS transporter;protein_id=WP_038270772.1;transl_table=11 NZ_CP087680.1 RefSeq gene 999157 999555 . - . ID=gene-LPH41_RS04635;Name=LPH41_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04635;old_locus_tag=LPH41_04635 NZ_CP087680.1 GeneMarkS-2+ CDS 999157 999555 . - 0 ID=cds-WP_051482281.1;Parent=gene-LPH41_RS04635;Dbxref=Genbank:WP_051482281.1;Name=WP_051482281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04635;product=hypothetical protein;protein_id=WP_051482281.1;transl_table=11 NZ_CP087680.1 RefSeq gene 999688 999837 . - . ID=gene-LPH41_RS04640;Name=LPH41_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04640;old_locus_tag=LPH41_04640 NZ_CP087680.1 GeneMarkS-2+ CDS 999688 999837 . - 0 ID=cds-WP_230428153.1;Parent=gene-LPH41_RS04640;Dbxref=Genbank:WP_230428153.1;Name=WP_230428153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04640;product=hypothetical protein;protein_id=WP_230428153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1000389 1001435 . - . ID=gene-LPH41_RS04645;Name=LPH41_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04645;old_locus_tag=LPH41_04645 NZ_CP087680.1 Protein Homology CDS 1000389 1001435 . - 0 ID=cds-WP_038270773.1;Parent=gene-LPH41_RS04645;Dbxref=Genbank:WP_038270773.1;Name=WP_038270773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852338.1;locus_tag=LPH41_RS04645;product=alpha/beta fold hydrolase;protein_id=WP_038270773.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1001618 1002556 . - . ID=gene-LPH41_RS04650;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LPH41_RS04650;old_locus_tag=LPH41_04650 NZ_CP087680.1 Protein Homology CDS 1001618 1002556 . - 0 ID=cds-WP_038270774.1;Parent=gene-LPH41_RS04650;Dbxref=Genbank:WP_038270774.1;Name=WP_038270774.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085263.1;locus_tag=LPH41_RS04650;product=RNA polymerase-binding protein DksA;protein_id=WP_038270774.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1002664 1002927 . + . ID=gene-LPH41_RS04655;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LPH41_RS04655;old_locus_tag=LPH41_04655 NZ_CP087680.1 Protein Homology CDS 1002664 1002927 . + 0 ID=cds-WP_038270775.1;Parent=gene-LPH41_RS04655;Dbxref=Genbank:WP_038270775.1;Name=WP_038270775.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893508.1;locus_tag=LPH41_RS04655;product=membrane protein insertion efficiency factor YidD;protein_id=WP_038270775.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1002924 1004273 . + . ID=gene-LPH41_RS04660;Name=LPH41_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04660;old_locus_tag=LPH41_04660 NZ_CP087680.1 Protein Homology CDS 1002924 1004273 . + 0 ID=cds-WP_038270776.1;Parent=gene-LPH41_RS04660;Dbxref=Genbank:WP_038270776.1;Name=WP_038270776.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302579.1;locus_tag=LPH41_RS04660;product=dihydroorotase;protein_id=WP_038270776.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1004321 1005124 . + . ID=gene-LPH41_RS04665;Name=LPH41_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04665;old_locus_tag=LPH41_04665 NZ_CP087680.1 Protein Homology CDS 1004321 1005124 . + 0 ID=cds-WP_230428269.1;Parent=gene-LPH41_RS04665;Dbxref=Genbank:WP_230428269.1;Name=WP_230428269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269661.1;locus_tag=LPH41_RS04665;product=M23 family metallopeptidase;protein_id=WP_230428269.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1005224 1006909 . - . ID=gene-LPH41_RS04670;Name=LPH41_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04670;old_locus_tag=LPH41_04670 NZ_CP087680.1 Protein Homology CDS 1005224 1006909 . - 0 ID=cds-WP_230428268.1;Parent=gene-LPH41_RS04670;Dbxref=Genbank:WP_230428268.1;Name=WP_230428268.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097571.1;locus_tag=LPH41_RS04670;product=diguanylate cyclase;protein_id=WP_230428268.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1007879 1009528 . - . ID=gene-LPH41_RS04675;Name=ggt;end_range=1009528,.;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=LPH41_RS04675;old_locus_tag=LPH41_04675;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 1007879 1009528 . - 0 ID=cds-LPH41_RS04675;Parent=gene-LPH41_RS04675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006750;end_range=1009528,.;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157276.1;locus_tag=LPH41_RS04675;partial=true;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1009636 1009920 . - . ID=gene-LPH41_RS04680;Name=LPH41_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04680;old_locus_tag=LPH41_04680 NZ_CP087680.1 Protein Homology CDS 1009636 1009920 . - 0 ID=cds-WP_038270856.1;Parent=gene-LPH41_RS04680;Dbxref=Genbank:WP_038270856.1;Name=WP_038270856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851038.1;locus_tag=LPH41_RS04680;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_038270856.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1010083 1010577 . - . ID=gene-LPH41_RS04685;Name=LPH41_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04685;old_locus_tag=LPH41_04685 NZ_CP087680.1 Protein Homology CDS 1010083 1010577 . - 0 ID=cds-WP_038270781.1;Parent=gene-LPH41_RS04685;Dbxref=Genbank:WP_038270781.1;Name=WP_038270781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157277.1;locus_tag=LPH41_RS04685;product=hypothetical protein;protein_id=WP_038270781.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1010626 1011114 . - . ID=gene-LPH41_RS04690;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LPH41_RS04690;old_locus_tag=LPH41_04690 NZ_CP087680.1 Protein Homology CDS 1010626 1011114 . - 0 ID=cds-WP_038270782.1;Parent=gene-LPH41_RS04690;Dbxref=Genbank:WP_038270782.1;Name=WP_038270782.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409091.1;locus_tag=LPH41_RS04690;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_038270782.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1011111 1011740 . - . ID=gene-LPH41_RS04695;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LPH41_RS04695;old_locus_tag=LPH41_04695 NZ_CP087680.1 Protein Homology CDS 1011111 1011740 . - 0 ID=cds-WP_038270857.1;Parent=gene-LPH41_RS04695;Dbxref=Genbank:WP_038270857.1;Name=WP_038270857.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852480.1;locus_tag=LPH41_RS04695;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_038270857.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1011914 1013818 . + . ID=gene-LPH41_RS04700;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LPH41_RS04700;old_locus_tag=LPH41_04700 NZ_CP087680.1 Protein Homology CDS 1011914 1013818 . + 0 ID=cds-WP_038270783.1;Parent=gene-LPH41_RS04700;Dbxref=Genbank:WP_038270783.1;Name=WP_038270783.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303855.1;locus_tag=LPH41_RS04700;product=molecular chaperone HtpG;protein_id=WP_038270783.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1014062 1016356 . - . ID=gene-LPH41_RS04705;Name=LPH41_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04705;old_locus_tag=LPH41_04705 NZ_CP087680.1 Protein Homology CDS 1014062 1016356 . - 0 ID=cds-WP_038270784.1;Parent=gene-LPH41_RS04705;Dbxref=Genbank:WP_038270784.1;Name=WP_038270784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893496.1;locus_tag=LPH41_RS04705;product=NADP-dependent malic enzyme;protein_id=WP_038270784.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1016521 1017861 . - . ID=gene-LPH41_RS04710;Name=LPH41_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04710;old_locus_tag=LPH41_04710 NZ_CP087680.1 Protein Homology CDS 1016521 1017861 . - 0 ID=cds-WP_038270785.1;Parent=gene-LPH41_RS04710;Dbxref=Genbank:WP_038270785.1;Name=WP_038270785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087914.1;locus_tag=LPH41_RS04710;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_038270785.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1018158 1019327 . + . ID=gene-LPH41_RS04715;Name=LPH41_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04715;old_locus_tag=LPH41_04715 NZ_CP087680.1 Protein Homology CDS 1018158 1019327 . + 0 ID=cds-WP_038270786.1;Parent=gene-LPH41_RS04715;Dbxref=Genbank:WP_038270786.1;Name=WP_038270786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087915.1;locus_tag=LPH41_RS04715;product=porin;protein_id=WP_038270786.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1020156 1021793 . + . ID=gene-LPH41_RS04720;Name=LPH41_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04720;old_locus_tag=LPH41_04720 NZ_CP087680.1 Protein Homology CDS 1020156 1021793 . + 0 ID=cds-WP_081755415.1;Parent=gene-LPH41_RS04720;Dbxref=Genbank:WP_081755415.1;Name=WP_081755415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165838.1;locus_tag=LPH41_RS04720;product=PAS-domain containing protein;protein_id=WP_081755415.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1021836 1022468 . - . ID=gene-LPH41_RS04725;Name=LPH41_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04725;old_locus_tag=LPH41_04725 NZ_CP087680.1 Protein Homology CDS 1021836 1022468 . - 0 ID=cds-WP_038270788.1;Parent=gene-LPH41_RS04725;Dbxref=Genbank:WP_038270788.1;Name=WP_038270788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097569.1;locus_tag=LPH41_RS04725;product=response regulator transcription factor;protein_id=WP_038270788.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1023176 1024219 . - . ID=gene-LPH41_RS04730;Name=LPH41_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04730;old_locus_tag=LPH41_04730 NZ_CP087680.1 Protein Homology CDS 1023176 1024219 . - 0 ID=cds-WP_171898041.1;Parent=gene-LPH41_RS04730;Dbxref=Genbank:WP_171898041.1;Name=WP_171898041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157495.1;locus_tag=LPH41_RS04730;product=ABC transporter substrate-binding protein;protein_id=WP_171898041.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1024216 1025598 . - . ID=gene-LPH41_RS04735;Name=LPH41_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04735;old_locus_tag=LPH41_04735 NZ_CP087680.1 Protein Homology CDS 1024216 1025598 . - 0 ID=cds-WP_038270789.1;Parent=gene-LPH41_RS04735;Dbxref=Genbank:WP_038270789.1;Name=WP_038270789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852489.1;locus_tag=LPH41_RS04735;product=sensor histidine kinase;protein_id=WP_038270789.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1025588 1026277 . - . ID=gene-LPH41_RS04740;Name=LPH41_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04740;old_locus_tag=LPH41_04740 NZ_CP087680.1 Protein Homology CDS 1025588 1026277 . - 0 ID=cds-WP_038270790.1;Parent=gene-LPH41_RS04740;Dbxref=Genbank:WP_038270790.1;Name=WP_038270790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085286.1;locus_tag=LPH41_RS04740;product=response regulator transcription factor;protein_id=WP_038270790.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1026483 1027673 . + . ID=gene-LPH41_RS04745;Name=LPH41_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04745;old_locus_tag=LPH41_04745 NZ_CP087680.1 Protein Homology CDS 1026483 1027673 . + 0 ID=cds-WP_038270791.1;Parent=gene-LPH41_RS04745;Dbxref=Genbank:WP_038270791.1;Name=WP_038270791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852491.1;locus_tag=LPH41_RS04745;product=OprO/OprP family phosphate-selective porin;protein_id=WP_038270791.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1027806 1029137 . + . ID=gene-LPH41_RS04750;Name=LPH41_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04750;old_locus_tag=LPH41_04750 NZ_CP087680.1 Protein Homology CDS 1027806 1029137 . + 0 ID=cds-WP_038270792.1;Parent=gene-LPH41_RS04750;Dbxref=Genbank:WP_038270792.1;Name=WP_038270792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085288.1;locus_tag=LPH41_RS04750;product=CitMHS family transporter;protein_id=WP_038270792.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1029196 1029936 . + . ID=gene-LPH41_RS04755;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=LPH41_RS04755;old_locus_tag=LPH41_04755 NZ_CP087680.1 Protein Homology CDS 1029196 1029936 . + 0 ID=cds-WP_038270793.1;Parent=gene-LPH41_RS04755;Dbxref=Genbank:WP_038270793.1;Name=WP_038270793.1;Ontology_term=GO:0042619,GO:0018454;gbkey=CDS;gene=phbB;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085289.1;locus_tag=LPH41_RS04755;product=acetoacetyl-CoA reductase;protein_id=WP_038270793.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1030296 1031753 . - . ID=gene-LPH41_RS04760;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LPH41_RS04760;old_locus_tag=LPH41_04760 NZ_CP087680.1 Protein Homology CDS 1030296 1031753 . - 0 ID=cds-WP_038270795.1;Parent=gene-LPH41_RS04760;Dbxref=Genbank:WP_038270795.1;Name=WP_038270795.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485567.1;locus_tag=LPH41_RS04760;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_038270795.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1031788 1033293 . - . ID=gene-LPH41_RS04765;Name=LPH41_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04765;old_locus_tag=LPH41_04765 NZ_CP087680.1 Protein Homology CDS 1031788 1033293 . - 0 ID=cds-WP_038270796.1;Parent=gene-LPH41_RS04765;Dbxref=Genbank:WP_038270796.1;Name=WP_038270796.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300411.1;locus_tag=LPH41_RS04765;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_038270796.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1033315 1035462 . - . ID=gene-LPH41_RS04770;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LPH41_RS04770;old_locus_tag=LPH41_04770 NZ_CP087680.1 Protein Homology CDS 1033315 1035462 . - 0 ID=cds-WP_038270797.1;Parent=gene-LPH41_RS04770;Dbxref=Genbank:WP_038270797.1;Name=WP_038270797.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485563.1;locus_tag=LPH41_RS04770;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_038270797.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1035470 1035775 . - . ID=gene-LPH41_RS04775;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LPH41_RS04775;old_locus_tag=LPH41_04775 NZ_CP087680.1 Protein Homology CDS 1035470 1035775 . - 0 ID=cds-WP_230439324.1;Parent=gene-LPH41_RS04775;Dbxref=Genbank:WP_230439324.1;Name=WP_230439324.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450557.1;locus_tag=LPH41_RS04775;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_230439324.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1035772 1036434 . - . ID=gene-LPH41_RS04780;Name=LPH41_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04780;old_locus_tag=LPH41_04780 NZ_CP087680.1 Protein Homology CDS 1035772 1036434 . - 0 ID=cds-WP_038270860.1;Parent=gene-LPH41_RS04780;Dbxref=Genbank:WP_038270860.1;Name=WP_038270860.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085294.1;locus_tag=LPH41_RS04780;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_038270860.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1036442 1036930 . - . ID=gene-LPH41_RS04785;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LPH41_RS04785;old_locus_tag=LPH41_04785 NZ_CP087680.1 Protein Homology CDS 1036442 1036930 . - 0 ID=cds-WP_038270799.1;Parent=gene-LPH41_RS04785;Dbxref=Genbank:WP_038270799.1;Name=WP_038270799.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927506.1;locus_tag=LPH41_RS04785;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_038270799.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1036934 1038025 . - . ID=gene-LPH41_RS04790;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LPH41_RS04790;old_locus_tag=LPH41_04790 NZ_CP087680.1 Protein Homology CDS 1036934 1038025 . - 0 ID=cds-WP_038270800.1;Parent=gene-LPH41_RS04790;Dbxref=Genbank:WP_038270800.1;Name=WP_038270800.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375869.1;locus_tag=LPH41_RS04790;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_038270800.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1038022 1040256 . - . ID=gene-LPH41_RS04795;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LPH41_RS04795;old_locus_tag=LPH41_04795 NZ_CP087680.1 Protein Homology CDS 1038022 1040256 . - 0 ID=cds-WP_114867061.1;Parent=gene-LPH41_RS04795;Dbxref=Genbank:WP_114867061.1;Name=WP_114867061.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851037.1;locus_tag=LPH41_RS04795;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_114867061.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1040253 1041587 . - . ID=gene-LPH41_RS04800;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LPH41_RS04800;old_locus_tag=LPH41_04800 NZ_CP087680.1 Protein Homology CDS 1040253 1041587 . - 0 ID=cds-WP_038270862.1;Parent=gene-LPH41_RS04800;Dbxref=Genbank:WP_038270862.1;Name=WP_038270862.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851036.1;locus_tag=LPH41_RS04800;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_038270862.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1041592 1042119 . - . ID=gene-LPH41_RS04805;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LPH41_RS04805;old_locus_tag=LPH41_04805 NZ_CP087680.1 Protein Homology CDS 1041592 1042119 . - 0 ID=cds-WP_038270802.1;Parent=gene-LPH41_RS04805;Dbxref=Genbank:WP_038270802.1;Name=WP_038270802.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410460.1;locus_tag=LPH41_RS04805;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_038270802.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1042116 1043423 . - . ID=gene-LPH41_RS04810;Name=LPH41_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04810;old_locus_tag=LPH41_04810 NZ_CP087680.1 Protein Homology CDS 1042116 1043423 . - 0 ID=cds-WP_038270803.1;Parent=gene-LPH41_RS04810;Dbxref=Genbank:WP_038270803.1;Name=WP_038270803.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810223.1;locus_tag=LPH41_RS04810;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_038270803.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1043424 1044161 . - . ID=gene-LPH41_RS04815;Name=LPH41_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04815;old_locus_tag=LPH41_04815 NZ_CP087680.1 Protein Homology CDS 1043424 1044161 . - 0 ID=cds-WP_038270805.1;Parent=gene-LPH41_RS04815;Dbxref=Genbank:WP_038270805.1;Name=WP_038270805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927494.1;locus_tag=LPH41_RS04815;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_038270805.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1044212 1044766 . - . ID=gene-LPH41_RS04820;Name=LPH41_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04820;old_locus_tag=LPH41_04820 NZ_CP087680.1 Protein Homology CDS 1044212 1044766 . - 0 ID=cds-WP_038270806.1;Parent=gene-LPH41_RS04820;Dbxref=Genbank:WP_038270806.1;Name=WP_038270806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914280.1;locus_tag=LPH41_RS04820;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_038270806.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1044757 1045113 . - . ID=gene-LPH41_RS04825;Name=LPH41_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04825;old_locus_tag=LPH41_04825 NZ_CP087680.1 Protein Homology CDS 1044757 1045113 . - 0 ID=cds-WP_038270807.1;Parent=gene-LPH41_RS04825;Dbxref=Genbank:WP_038270807.1;Name=WP_038270807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467430.1;locus_tag=LPH41_RS04825;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_038270807.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1045228 1045312 . - . ID=gene-LPH41_RS04830;Name=LPH41_RS04830;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS04830;old_locus_tag=LPH41_04830 NZ_CP087680.1 tRNAscan-SE tRNA 1045228 1045312 . - . ID=rna-LPH41_RS04830;Parent=gene-LPH41_RS04830;anticodon=(pos:complement(1045276..1045278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04830;product=tRNA-Leu NZ_CP087680.1 tRNAscan-SE exon 1045228 1045312 . - . ID=exon-LPH41_RS04830-1;Parent=rna-LPH41_RS04830;anticodon=(pos:complement(1045276..1045278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04830;product=tRNA-Leu NZ_CP087680.1 RefSeq gene 1045363 1045773 . - . ID=gene-LPH41_RS04835;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LPH41_RS04835;old_locus_tag=LPH41_04835 NZ_CP087680.1 Protein Homology CDS 1045363 1045773 . - 0 ID=cds-WP_038270808.1;Parent=gene-LPH41_RS04835;Dbxref=Genbank:WP_038270808.1;Name=WP_038270808.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892840.1;locus_tag=LPH41_RS04835;product=preprotein translocase subunit SecG;protein_id=WP_038270808.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1045767 1046543 . - . ID=gene-LPH41_RS04840;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LPH41_RS04840;old_locus_tag=LPH41_04840 NZ_CP087680.1 Protein Homology CDS 1045767 1046543 . - 0 ID=cds-WP_038270809.1;Parent=gene-LPH41_RS04840;Dbxref=Genbank:WP_038270809.1;Name=WP_038270809.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156090.1;locus_tag=LPH41_RS04840;product=triose-phosphate isomerase;protein_id=WP_038270809.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1046941 1047693 . - . ID=gene-LPH41_RS04845;Name=LPH41_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04845;old_locus_tag=LPH41_04845 NZ_CP087680.1 Protein Homology CDS 1046941 1047693 . - 0 ID=cds-WP_038270810.1;Parent=gene-LPH41_RS04845;Dbxref=Genbank:WP_038270810.1;Name=WP_038270810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LPH41_RS04845;product=SDR family oxidoreductase;protein_id=WP_038270810.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1048831 1049181 . - . ID=gene-LPH41_RS04850;Name=LPH41_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04850;old_locus_tag=LPH41_04850 NZ_CP087680.1 GeneMarkS-2+ CDS 1048831 1049181 . - 0 ID=cds-WP_160199326.1;Parent=gene-LPH41_RS04850;Dbxref=Genbank:WP_160199326.1;Name=WP_160199326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04850;product=hypothetical protein;protein_id=WP_160199326.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1049295 1050155 . - . ID=gene-LPH41_RS04855;Name=LPH41_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04855;old_locus_tag=LPH41_04855 NZ_CP087680.1 GeneMarkS-2+ CDS 1049295 1050155 . - 0 ID=cds-WP_160165153.1;Parent=gene-LPH41_RS04855;Dbxref=Genbank:WP_160165153.1;Name=WP_160165153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04855;product=ABC transporter permease;protein_id=WP_160165153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1050341 1053511 . - . ID=gene-LPH41_RS04860;Name=LPH41_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04860;old_locus_tag=LPH41_04860 NZ_CP087680.1 Protein Homology CDS 1050341 1053511 . - 0 ID=cds-WP_230439325.1;Parent=gene-LPH41_RS04860;Dbxref=Genbank:WP_230439325.1;Name=WP_230439325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001495.1;locus_tag=LPH41_RS04860;product=type I restriction endonuclease subunit R;protein_id=WP_230439325.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1053520 1053981 . - . ID=gene-LPH41_RS04865;Name=LPH41_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04865;old_locus_tag=LPH41_04865 NZ_CP087680.1 Protein Homology CDS 1053520 1053981 . - 0 ID=cds-WP_200866187.1;Parent=gene-LPH41_RS04865;Dbxref=Genbank:WP_200866187.1;Name=WP_200866187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025468.2;locus_tag=LPH41_RS04865;product=DUF4276 family protein;protein_id=WP_200866187.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1053971 1054996 . - . ID=gene-LPH41_RS04870;Name=LPH41_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04870;old_locus_tag=LPH41_04870 NZ_CP087680.1 Protein Homology CDS 1053971 1054996 . - 0 ID=cds-WP_205395222.1;Parent=gene-LPH41_RS04870;Dbxref=Genbank:WP_205395222.1;Name=WP_205395222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.2;locus_tag=LPH41_RS04870;product=SIR2 family protein;protein_id=WP_205395222.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1054993 1056366 . - . ID=gene-LPH41_RS04875;Name=LPH41_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04875;old_locus_tag=LPH41_04875 NZ_CP087680.1 GeneMarkS-2+ CDS 1054993 1056366 . - 0 ID=cds-WP_051482285.1;Parent=gene-LPH41_RS04875;Dbxref=Genbank:WP_051482285.1;Name=WP_051482285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04875;product=restriction endonuclease subunit S;protein_id=WP_051482285.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1056356 1058116 . - . ID=gene-LPH41_RS04880;Name=LPH41_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04880;old_locus_tag=LPH41_04880 NZ_CP087680.1 Protein Homology CDS 1056356 1058116 . - 0 ID=cds-WP_038270814.1;Parent=gene-LPH41_RS04880;Dbxref=Genbank:WP_038270814.1;Name=WP_038270814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903354.1;locus_tag=LPH41_RS04880;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_038270814.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1058182 1058412 . - . ID=gene-LPH41_RS04885;Name=LPH41_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04885;old_locus_tag=LPH41_04885 NZ_CP087680.1 Protein Homology CDS 1058182 1058412 . - 0 ID=cds-WP_069636204.1;Parent=gene-LPH41_RS04885;Dbxref=Genbank:WP_069636204.1;Name=WP_069636204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011806707.1;locus_tag=LPH41_RS04885;product=hypothetical protein;protein_id=WP_069636204.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1058633 1058708 . - . ID=gene-LPH41_RS04890;Name=LPH41_RS04890;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS04890;old_locus_tag=LPH41_04890 NZ_CP087680.1 tRNAscan-SE tRNA 1058633 1058708 . - . ID=rna-LPH41_RS04890;Parent=gene-LPH41_RS04890;anticodon=(pos:complement(1058673..1058675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04890;product=tRNA-Phe NZ_CP087680.1 tRNAscan-SE exon 1058633 1058708 . - . ID=exon-LPH41_RS04890-1;Parent=rna-LPH41_RS04890;anticodon=(pos:complement(1058673..1058675));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS04890;product=tRNA-Phe NZ_CP087680.1 RefSeq gene 1059358 1061961 . - . ID=gene-LPH41_RS04895;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LPH41_RS04895;old_locus_tag=LPH41_04895 NZ_CP087680.1 Protein Homology CDS 1059358 1061961 . - 0 ID=cds-WP_038270816.1;Parent=gene-LPH41_RS04895;Dbxref=Genbank:WP_038270816.1;Name=WP_038270816.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908727.1;locus_tag=LPH41_RS04895;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_038270816.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1062011 1062409 . - . ID=gene-LPH41_RS04900;Name=LPH41_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04900;old_locus_tag=LPH41_04900 NZ_CP087680.1 Protein Homology CDS 1062011 1062409 . - 0 ID=cds-WP_038270867.1;Parent=gene-LPH41_RS04900;Dbxref=Genbank:WP_038270867.1;Name=WP_038270867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267153.1;locus_tag=LPH41_RS04900;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_038270867.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1062414 1062653 . - . ID=gene-LPH41_RS04905;Name=LPH41_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04905;old_locus_tag=LPH41_04905 NZ_CP087680.1 Protein Homology CDS 1062414 1062653 . - 0 ID=cds-WP_038270817.1;Parent=gene-LPH41_RS04905;Dbxref=Genbank:WP_038270817.1;Name=WP_038270817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085317.1;locus_tag=LPH41_RS04905;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038270817.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1062910 1065651 . + . ID=gene-LPH41_RS04910;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LPH41_RS04910;old_locus_tag=LPH41_04910 NZ_CP087680.1 Protein Homology CDS 1062910 1065651 . + 0 ID=cds-WP_038270818.1;Parent=gene-LPH41_RS04910;Dbxref=Genbank:WP_038270818.1;Name=WP_038270818.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851015.1;locus_tag=LPH41_RS04910;product=aconitate hydratase AcnA;protein_id=WP_038270818.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1066963 1068648 . + . ID=gene-LPH41_RS04915;Name=LPH41_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04915;old_locus_tag=LPH41_04915 NZ_CP087680.1 Protein Homology CDS 1066963 1068648 . + 0 ID=cds-WP_230439326.1;Parent=gene-LPH41_RS04915;Dbxref=Genbank:WP_230439326.1;Name=WP_230439326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571491.1;locus_tag=LPH41_RS04915;product=long-chain fatty acid--CoA ligase;protein_id=WP_230439326.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1070004 1070900 . + . ID=gene-LPH41_RS04920;Name=LPH41_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04920;old_locus_tag=LPH41_04920 NZ_CP087680.1 Protein Homology CDS 1070004 1070900 . + 0 ID=cds-WP_038270821.1;Parent=gene-LPH41_RS04920;Dbxref=Genbank:WP_038270821.1;Name=WP_038270821.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851011.1;locus_tag=LPH41_RS04920;product=TIGR01777 family oxidoreductase;protein_id=WP_038270821.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1071731 1073176 . + . ID=gene-LPH41_RS04925;Name=LPH41_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04925;old_locus_tag=LPH41_04925 NZ_CP087680.1 Protein Homology CDS 1071731 1073176 . + 0 ID=cds-WP_038270822.1;Parent=gene-LPH41_RS04925;Dbxref=Genbank:WP_038270822.1;Name=WP_038270822.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257055.1;locus_tag=LPH41_RS04925;product=Do family serine endopeptidase;protein_id=WP_038270822.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1073429 1073791 . + . ID=gene-LPH41_RS04930;Name=LPH41_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04930;old_locus_tag=LPH41_04930 NZ_CP087680.1 Protein Homology CDS 1073429 1073791 . + 0 ID=cds-WP_038270823.1;Parent=gene-LPH41_RS04930;Dbxref=Genbank:WP_038270823.1;Name=WP_038270823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010486932.1;locus_tag=LPH41_RS04930;product=hypothetical protein;protein_id=WP_038270823.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1073797 1074276 . + . ID=gene-LPH41_RS04935;Name=LPH41_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04935;old_locus_tag=LPH41_04935 NZ_CP087680.1 Protein Homology CDS 1073797 1074276 . + 0 ID=cds-WP_051482286.1;Parent=gene-LPH41_RS04935;Dbxref=Genbank:WP_051482286.1;Name=WP_051482286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085335.1;locus_tag=LPH41_RS04935;product=hypothetical protein;protein_id=WP_051482286.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1074273 1074662 . + . ID=gene-LPH41_RS04940;Name=LPH41_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04940;old_locus_tag=LPH41_04940 NZ_CP087680.1 Protein Homology CDS 1074273 1074662 . + 0 ID=cds-WP_038270824.1;Parent=gene-LPH41_RS04940;Dbxref=Genbank:WP_038270824.1;Name=WP_038270824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851009.1;locus_tag=LPH41_RS04940;product=hypothetical protein;protein_id=WP_038270824.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1074747 1075856 . + . ID=gene-LPH41_RS04945;Name=LPH41_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04945;old_locus_tag=LPH41_04945 NZ_CP087680.1 Protein Homology CDS 1074747 1075856 . + 0 ID=cds-WP_038270826.1;Parent=gene-LPH41_RS04945;Dbxref=Genbank:WP_038270826.1;Name=WP_038270826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087985.1;locus_tag=LPH41_RS04945;product=AI-2E family transporter;protein_id=WP_038270826.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1075904 1076137 . + . ID=gene-LPH41_RS04950;Name=LPH41_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04950;old_locus_tag=LPH41_04950 NZ_CP087680.1 GeneMarkS-2+ CDS 1075904 1076137 . + 0 ID=cds-WP_152536595.1;Parent=gene-LPH41_RS04950;Dbxref=Genbank:WP_152536595.1;Name=WP_152536595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04950;product=hypothetical protein;protein_id=WP_152536595.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1076385 1077752 . + . ID=gene-LPH41_RS04955;Name=LPH41_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04955;old_locus_tag=LPH41_04955 NZ_CP087680.1 Protein Homology CDS 1076385 1077752 . + 0 ID=cds-WP_038270828.1;Parent=gene-LPH41_RS04955;Dbxref=Genbank:WP_038270828.1;Name=WP_038270828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851007.1;locus_tag=LPH41_RS04955;product=M17 family metallopeptidase;protein_id=WP_038270828.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1078501 1079361 . - . ID=gene-LPH41_RS04960;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LPH41_RS04960;old_locus_tag=LPH41_04960 NZ_CP087680.1 Protein Homology CDS 1078501 1079361 . - 0 ID=cds-WP_051482288.1;Parent=gene-LPH41_RS04960;Dbxref=Genbank:WP_051482288.1;Name=WP_051482288.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902633.1;locus_tag=LPH41_RS04960;product=EamA family transporter RarD;protein_id=WP_051482288.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1079394 1079537 . - . ID=gene-LPH41_RS04965;Name=LPH41_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04965;old_locus_tag=LPH41_04965 NZ_CP087680.1 GeneMarkS-2+ CDS 1079394 1079537 . - 0 ID=cds-WP_160199328.1;Parent=gene-LPH41_RS04965;Dbxref=Genbank:WP_160199328.1;Name=WP_160199328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04965;product=hypothetical protein;protein_id=WP_160199328.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1080384 1080614 . - . ID=gene-LPH41_RS04970;Name=LPH41_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04970;old_locus_tag=LPH41_04970 NZ_CP087680.1 GeneMarkS-2+ CDS 1080384 1080614 . - 0 ID=cds-WP_152536596.1;Parent=gene-LPH41_RS04970;Dbxref=Genbank:WP_152536596.1;Name=WP_152536596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04970;product=hypothetical protein;protein_id=WP_152536596.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1080939 1081160 . - . ID=gene-LPH41_RS04975;Name=LPH41_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04975;old_locus_tag=LPH41_04975 NZ_CP087680.1 GeneMarkS-2+ CDS 1080939 1081160 . - 0 ID=cds-WP_152536597.1;Parent=gene-LPH41_RS04975;Dbxref=Genbank:WP_152536597.1;Name=WP_152536597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS04975;product=hypothetical protein;protein_id=WP_152536597.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1081705 1082364 . - . ID=gene-LPH41_RS04980;Name=LPH41_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04980;old_locus_tag=LPH41_04980 NZ_CP087680.1 Protein Homology CDS 1081705 1082364 . - 0 ID=cds-WP_038270869.1;Parent=gene-LPH41_RS04980;Dbxref=Genbank:WP_038270869.1;Name=WP_038270869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087991.1;locus_tag=LPH41_RS04980;product=serine/threonine-protein kinase;protein_id=WP_038270869.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1082455 1084482 . + . ID=gene-LPH41_RS04985;Name=LPH41_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04985;old_locus_tag=LPH41_04985 NZ_CP087680.1 Protein Homology CDS 1082455 1084482 . + 0 ID=cds-WP_038270834.1;Parent=gene-LPH41_RS04985;Dbxref=Genbank:WP_038270834.1;Name=WP_038270834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851005.1;locus_tag=LPH41_RS04985;product=bifunctional DedA family/phosphatase PAP2 family protein;protein_id=WP_038270834.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1085118 1086533 . - . ID=gene-LPH41_RS04990;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LPH41_RS04990;old_locus_tag=LPH41_04990 NZ_CP087680.1 Protein Homology CDS 1085118 1086533 . - 0 ID=cds-WP_038270870.1;Parent=gene-LPH41_RS04990;Dbxref=Genbank:WP_038270870.1;Name=WP_038270870.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851061.1;locus_tag=LPH41_RS04990;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_038270870.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1086821 1087384 . - . ID=gene-LPH41_RS04995;Name=LPH41_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS04995;old_locus_tag=LPH41_04995 NZ_CP087680.1 Protein Homology CDS 1086821 1087384 . - 0 ID=cds-WP_038270836.1;Parent=gene-LPH41_RS04995;Dbxref=Genbank:WP_038270836.1;Name=WP_038270836.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364422.1;locus_tag=LPH41_RS04995;product=adenylate kinase;protein_id=WP_038270836.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1087529 1088782 . + . ID=gene-LPH41_RS05000;Name=LPH41_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05000;old_locus_tag=LPH41_05000 NZ_CP087680.1 Protein Homology CDS 1087529 1088782 . + 0 ID=cds-WP_038270837.1;Parent=gene-LPH41_RS05000;Dbxref=Genbank:WP_038270837.1;Name=WP_038270837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087999.1;locus_tag=LPH41_RS05000;product=6-phosphofructokinase;protein_id=WP_038270837.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1089256 1089831 . + . ID=gene-LPH41_RS05005;Name=LPH41_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05005;old_locus_tag=LPH41_05005 NZ_CP087680.1 Protein Homology CDS 1089256 1089831 . + 0 ID=cds-WP_038270840.1;Parent=gene-LPH41_RS05005;Dbxref=Genbank:WP_038270840.1;Name=WP_038270840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851002.1;locus_tag=LPH41_RS05005;product=DUF1439 domain-containing protein;protein_id=WP_038270840.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1090138 1090551 . - . ID=gene-LPH41_RS05010;Name=LPH41_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05010;old_locus_tag=LPH41_05010 NZ_CP087680.1 GeneMarkS-2+ CDS 1090138 1090551 . - 0 ID=cds-WP_069636205.1;Parent=gene-LPH41_RS05010;Dbxref=Genbank:WP_069636205.1;Name=WP_069636205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05010;product=SAM-dependent methyltransferase;protein_id=WP_069636205.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1091225 1092400 . + . ID=gene-LPH41_RS05015;Name=LPH41_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05015;old_locus_tag=LPH41_05015 NZ_CP087680.1 Protein Homology CDS 1091225 1092400 . + 0 ID=cds-WP_230439327.1;Parent=gene-LPH41_RS05015;Dbxref=Genbank:WP_230439327.1;Name=WP_230439327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097547.1;locus_tag=LPH41_RS05015;product=MFS transporter;protein_id=WP_230439327.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1092583 1095204 . - . ID=gene-LPH41_RS05020;Name=LPH41_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05020;old_locus_tag=LPH41_05020 NZ_CP087680.1 Protein Homology CDS 1092583 1095204 . - 0 ID=cds-WP_267903169.1;Parent=gene-LPH41_RS05020;Dbxref=Genbank:WP_267903169.1;Name=WP_267903169.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337847.1;locus_tag=LPH41_RS05020;product=S8 family serine peptidase;protein_id=WP_267903169.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1095299 1095946 . + . ID=gene-LPH41_RS11990;Name=LPH41_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11990 NZ_CP087680.1 GeneMarkS-2+ CDS 1095299 1095946 . + 0 ID=cds-WP_268980388.1;Parent=gene-LPH41_RS11990;Dbxref=Genbank:WP_268980388.1;Name=WP_268980388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11990;product=hypothetical protein;protein_id=WP_268980388.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1096682 1099537 . - . ID=gene-LPH41_RS05025;Name=LPH41_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05025;old_locus_tag=LPH41_05025 NZ_CP087680.1 Protein Homology CDS 1096682 1099537 . - 0 ID=cds-WP_230439328.1;Parent=gene-LPH41_RS05025;Dbxref=Genbank:WP_230439328.1;Name=WP_230439328.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097586.1;locus_tag=LPH41_RS05025;product=S8 family serine peptidase;protein_id=WP_230439328.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1099785 1099979 . + . ID=gene-LPH41_RS05030;Name=LPH41_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05030;old_locus_tag=LPH41_05030 NZ_CP087680.1 GeneMarkS-2+ CDS 1099785 1099979 . + 0 ID=cds-WP_038271113.1;Parent=gene-LPH41_RS05030;Dbxref=Genbank:WP_038271113.1;Name=WP_038271113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05030;product=hypothetical protein;protein_id=WP_038271113.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1100616 1100780 . + . ID=gene-LPH41_RS05035;Name=LPH41_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05035;old_locus_tag=LPH41_05035 NZ_CP087680.1 GeneMarkS-2+ CDS 1100616 1100780 . + 0 ID=cds-WP_160165166.1;Parent=gene-LPH41_RS05035;Dbxref=Genbank:WP_160165166.1;Name=WP_160165166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05035;product=hypothetical protein;protein_id=WP_160165166.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1100976 1101182 . + . ID=gene-LPH41_RS05040;Name=LPH41_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05040;old_locus_tag=LPH41_05040 NZ_CP087680.1 GeneMarkS-2+ CDS 1100976 1101182 . + 0 ID=cds-WP_069636211.1;Parent=gene-LPH41_RS05040;Dbxref=Genbank:WP_069636211.1;Name=WP_069636211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05040;product=hypothetical protein;protein_id=WP_069636211.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1101190 1101537 . - . ID=gene-LPH41_RS05045;Name=LPH41_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05045;old_locus_tag=LPH41_05045 NZ_CP087680.1 GeneMarkS-2+ CDS 1101190 1101537 . - 0 ID=cds-WP_230428150.1;Parent=gene-LPH41_RS05045;Dbxref=Genbank:WP_230428150.1;Name=WP_230428150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05045;product=hypothetical protein;protein_id=WP_230428150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1101594 1101905 . - . ID=gene-LPH41_RS05050;Name=LPH41_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05050;old_locus_tag=LPH41_05050 NZ_CP087680.1 Protein Homology CDS 1101594 1101905 . - 0 ID=cds-WP_038271126.1;Parent=gene-LPH41_RS05050;Dbxref=Genbank:WP_038271126.1;Name=WP_038271126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011153918.1;locus_tag=LPH41_RS05050;product=hypothetical protein;protein_id=WP_038271126.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1102111 1102233 . + . ID=gene-LPH41_RS11995;Name=LPH41_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11995 NZ_CP087680.1 GeneMarkS-2+ CDS 1102111 1102233 . + 0 ID=cds-WP_267903167.1;Parent=gene-LPH41_RS11995;Dbxref=Genbank:WP_267903167.1;Name=WP_267903167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11995;product=hypothetical protein;protein_id=WP_267903167.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1102574 1102981 . - . ID=gene-LPH41_RS05055;Name=LPH41_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05055;old_locus_tag=LPH41_05055 NZ_CP087680.1 GeneMarkS-2+ CDS 1102574 1102981 . - 0 ID=cds-WP_069636209.1;Parent=gene-LPH41_RS05055;Dbxref=Genbank:WP_069636209.1;Name=WP_069636209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05055;product=hypothetical protein;protein_id=WP_069636209.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1104425 1104733 . - . ID=gene-LPH41_RS05060;Name=LPH41_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05060;old_locus_tag=LPH41_05060 NZ_CP087680.1 Protein Homology CDS 1104425 1104733 . - 0 ID=cds-WP_038271109.1;Parent=gene-LPH41_RS05060;Dbxref=Genbank:WP_038271109.1;Name=WP_038271109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892802.1;locus_tag=LPH41_RS05060;product=hypothetical protein;protein_id=WP_038271109.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1105056 1105274 . - . ID=gene-LPH41_RS05065;Name=LPH41_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05065;old_locus_tag=LPH41_05065 NZ_CP087680.1 GeneMarkS-2+ CDS 1105056 1105274 . - 0 ID=cds-WP_152536606.1;Parent=gene-LPH41_RS05065;Dbxref=Genbank:WP_152536606.1;Name=WP_152536606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05065;product=hypothetical protein;protein_id=WP_152536606.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1106365 1106778 . + . ID=gene-LPH41_RS05070;Name=LPH41_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05070;old_locus_tag=LPH41_05070 NZ_CP087680.1 GeneMarkS-2+ CDS 1106365 1106778 . + 0 ID=cds-WP_162814080.1;Parent=gene-LPH41_RS05070;Dbxref=Genbank:WP_162814080.1;Name=WP_162814080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05070;product=hypothetical protein;protein_id=WP_162814080.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1107022 1108371 . + . ID=gene-LPH41_RS05075;Name=LPH41_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05075;old_locus_tag=LPH41_05075 NZ_CP087680.1 Protein Homology CDS 1107022 1108371 . + 0 ID=cds-WP_038271104.1;Parent=gene-LPH41_RS05075;Dbxref=Genbank:WP_038271104.1;Name=WP_038271104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851455.1;locus_tag=LPH41_RS05075;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_038271104.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1108431 1109834 . + . ID=gene-LPH41_RS05080;Name=LPH41_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05080;old_locus_tag=LPH41_05080 NZ_CP087680.1 Protein Homology CDS 1108431 1109834 . + 0 ID=cds-WP_038271103.1;Parent=gene-LPH41_RS05080;Dbxref=Genbank:WP_038271103.1;Name=WP_038271103.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850199.1;locus_tag=LPH41_RS05080;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_038271103.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1110003 1110911 . - . ID=gene-LPH41_RS05085;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LPH41_RS05085;old_locus_tag=LPH41_05085 NZ_CP087680.1 Protein Homology CDS 1110003 1110911 . - 0 ID=cds-WP_038271102.1;Parent=gene-LPH41_RS05085;Dbxref=Genbank:WP_038271102.1;Name=WP_038271102.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851453.1;locus_tag=LPH41_RS05085;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_038271102.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1110908 1111465 . - . ID=gene-LPH41_RS05090;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LPH41_RS05090;old_locus_tag=LPH41_05090 NZ_CP087680.1 Protein Homology CDS 1110908 1111465 . - 0 ID=cds-WP_038271101.1;Parent=gene-LPH41_RS05090;Dbxref=Genbank:WP_038271101.1;Name=WP_038271101.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377788.1;locus_tag=LPH41_RS05090;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_038271101.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1111462 1112349 . - . ID=gene-LPH41_RS05095;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LPH41_RS05095;old_locus_tag=LPH41_05095 NZ_CP087680.1 Protein Homology CDS 1111462 1112349 . - 0 ID=cds-WP_038271100.1;Parent=gene-LPH41_RS05095;Dbxref=Genbank:WP_038271100.1;Name=WP_038271100.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903936.1;locus_tag=LPH41_RS05095;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_038271100.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1112412 1113467 . - . ID=gene-LPH41_RS05100;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LPH41_RS05100;old_locus_tag=LPH41_05100 NZ_CP087680.1 Protein Homology CDS 1112412 1113467 . - 0 ID=cds-WP_038271099.1;Parent=gene-LPH41_RS05100;Dbxref=Genbank:WP_038271099.1;Name=WP_038271099.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270013.1;locus_tag=LPH41_RS05100;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_038271099.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1113681 1114430 . + . ID=gene-LPH41_RS05105;Name=LPH41_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05105;old_locus_tag=LPH41_05105 NZ_CP087680.1 Protein Homology CDS 1113681 1114430 . + 0 ID=cds-WP_038271098.1;Parent=gene-LPH41_RS05105;Dbxref=Genbank:WP_038271098.1;Name=WP_038271098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086235.1;locus_tag=LPH41_RS05105;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_038271098.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1114427 1115374 . + . ID=gene-LPH41_RS05110;Name=LPH41_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05110;old_locus_tag=LPH41_05110 NZ_CP087680.1 Protein Homology CDS 1114427 1115374 . + 0 ID=cds-WP_038271097.1;Parent=gene-LPH41_RS05110;Dbxref=Genbank:WP_038271097.1;Name=WP_038271097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449664.1;locus_tag=LPH41_RS05110;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_038271097.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1115730 1117553 . + . ID=gene-LPH41_RS05115;Name=LPH41_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05115;old_locus_tag=LPH41_05115 NZ_CP087680.1 Protein Homology CDS 1115730 1117553 . + 0 ID=cds-WP_038271096.1;Parent=gene-LPH41_RS05115;Dbxref=Genbank:WP_038271096.1;Name=WP_038271096.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851446.1;locus_tag=LPH41_RS05115;product=DEAD/DEAH box helicase;protein_id=WP_038271096.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1118183 1118374 . + . ID=gene-LPH41_RS05120;Name=LPH41_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05120;old_locus_tag=LPH41_05120 NZ_CP087680.1 GeneMarkS-2+ CDS 1118183 1118374 . + 0 ID=cds-WP_114867058.1;Parent=gene-LPH41_RS05120;Dbxref=Genbank:WP_114867058.1;Name=WP_114867058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05120;product=hypothetical protein;protein_id=WP_114867058.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1119104 1120003 . - . ID=gene-LPH41_RS05125;Name=LPH41_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05125;old_locus_tag=LPH41_05125 NZ_CP087680.1 Protein Homology CDS 1119104 1120003 . - 0 ID=cds-WP_171898070.1;Parent=gene-LPH41_RS05125;Dbxref=Genbank:WP_171898070.1;Name=WP_171898070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304048.1;locus_tag=LPH41_RS05125;product=DMT family transporter;protein_id=WP_171898070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1120149 1120358 . + . ID=gene-LPH41_RS05130;Name=LPH41_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05130;old_locus_tag=LPH41_05130 NZ_CP087680.1 GeneMarkS-2+ CDS 1120149 1120358 . + 0 ID=cds-WP_038271095.1;Parent=gene-LPH41_RS05130;Dbxref=Genbank:WP_038271095.1;Name=WP_038271095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05130;product=hypothetical protein;protein_id=WP_038271095.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1121141 1121953 . + . ID=gene-LPH41_RS05135;Name=LPH41_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05135;old_locus_tag=LPH41_05135 NZ_CP087680.1 Protein Homology CDS 1121141 1121953 . + 0 ID=cds-WP_081755431.1;Parent=gene-LPH41_RS05135;Dbxref=Genbank:WP_081755431.1;Name=WP_081755431.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=LPH41_RS05135;product=cation:proton antiporter;protein_id=WP_081755431.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1122111 1122239 . - . ID=gene-LPH41_RS12000;Name=LPH41_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12000 NZ_CP087680.1 GeneMarkS-2+ CDS 1122111 1122239 . - 0 ID=cds-WP_267903166.1;Parent=gene-LPH41_RS12000;Dbxref=Genbank:WP_267903166.1;Name=WP_267903166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12000;product=hypothetical protein;protein_id=WP_267903166.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1122906 1123988 . + . ID=gene-LPH41_RS05140;Name=LPH41_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05140;old_locus_tag=LPH41_05140 NZ_CP087680.1 Protein Homology CDS 1122906 1123988 . + 0 ID=cds-WP_038271123.1;Parent=gene-LPH41_RS05140;Dbxref=Genbank:WP_038271123.1;Name=WP_038271123.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572943.1;locus_tag=LPH41_RS05140;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038271123.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1123985 1127068 . + . ID=gene-LPH41_RS05145;Name=LPH41_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05145;old_locus_tag=LPH41_05145 NZ_CP087680.1 Protein Homology CDS 1123985 1127068 . + 0 ID=cds-WP_038271094.1;Parent=gene-LPH41_RS05145;Dbxref=Genbank:WP_038271094.1;Name=WP_038271094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097539.1;locus_tag=LPH41_RS05145;product=efflux RND transporter permease subunit;protein_id=WP_038271094.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1128514 1129395 . - . ID=gene-LPH41_RS05150;Name=LPH41_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05150;old_locus_tag=LPH41_05150 NZ_CP087680.1 Protein Homology CDS 1128514 1129395 . - 0 ID=cds-WP_038271093.1;Parent=gene-LPH41_RS05150;Dbxref=Genbank:WP_038271093.1;Name=WP_038271093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089089.1;locus_tag=LPH41_RS05150;product=SDR family oxidoreductase;protein_id=WP_038271093.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1129511 1129942 . + . ID=gene-LPH41_RS05155;Name=LPH41_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05155;old_locus_tag=LPH41_05155 NZ_CP087680.1 Protein Homology CDS 1129511 1129942 . + 0 ID=cds-WP_038271092.1;Parent=gene-LPH41_RS05155;Dbxref=Genbank:WP_038271092.1;Name=WP_038271092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337583.1;locus_tag=LPH41_RS05155;product=helix-turn-helix domain-containing protein;protein_id=WP_038271092.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1130409 1132511 . - . ID=gene-LPH41_RS05160;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LPH41_RS05160;old_locus_tag=LPH41_05160 NZ_CP087680.1 Protein Homology CDS 1130409 1132511 . - 0 ID=cds-WP_038271091.1;Parent=gene-LPH41_RS05160;Dbxref=Genbank:WP_038271091.1;Name=WP_038271091.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086257.1;locus_tag=LPH41_RS05160;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_038271091.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1132665 1132925 . - . ID=gene-LPH41_RS05165;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LPH41_RS05165;old_locus_tag=LPH41_05165 NZ_CP087680.1 Protein Homology CDS 1132665 1132925 . - 0 ID=cds-WP_038271089.1;Parent=gene-LPH41_RS05165;Dbxref=Genbank:WP_038271089.1;Name=WP_038271089.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810194.1;locus_tag=LPH41_RS05165;product=30S ribosomal protein S15;protein_id=WP_038271089.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1133104 1134006 . - . ID=gene-LPH41_RS05170;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LPH41_RS05170;old_locus_tag=LPH41_05170 NZ_CP087680.1 Protein Homology CDS 1133104 1134006 . - 0 ID=cds-WP_038271087.1;Parent=gene-LPH41_RS05170;Dbxref=Genbank:WP_038271087.1;Name=WP_038271087.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852611.1;locus_tag=LPH41_RS05170;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_038271087.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1134103 1134480 . - . ID=gene-LPH41_RS05175;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LPH41_RS05175;old_locus_tag=LPH41_05175 NZ_CP087680.1 Protein Homology CDS 1134103 1134480 . - 0 ID=cds-WP_038271086.1;Parent=gene-LPH41_RS05175;Dbxref=Genbank:WP_038271086.1;Name=WP_038271086.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892777.1;locus_tag=LPH41_RS05175;product=30S ribosome-binding factor RbfA;protein_id=WP_038271086.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1134600 1137263 . - . ID=gene-LPH41_RS05180;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LPH41_RS05180;old_locus_tag=LPH41_05180 NZ_CP087680.1 Protein Homology CDS 1134600 1137263 . - 0 ID=cds-WP_038271084.1;Parent=gene-LPH41_RS05180;Dbxref=Genbank:WP_038271084.1;Name=WP_038271084.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159225.1;locus_tag=LPH41_RS05180;product=translation initiation factor IF-2;protein_id=WP_038271084.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1137360 1138871 . - . ID=gene-LPH41_RS05185;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LPH41_RS05185;old_locus_tag=LPH41_05185 NZ_CP087680.1 Protein Homology CDS 1137360 1138871 . - 0 ID=cds-WP_038271083.1;Parent=gene-LPH41_RS05185;Dbxref=Genbank:WP_038271083.1;Name=WP_038271083.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660577.1;locus_tag=LPH41_RS05185;product=transcription termination factor NusA;protein_id=WP_038271083.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1138877 1139467 . - . ID=gene-LPH41_RS05190;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LPH41_RS05190;old_locus_tag=LPH41_05190 NZ_CP087680.1 Protein Homology CDS 1138877 1139467 . - 0 ID=cds-WP_038271122.1;Parent=gene-LPH41_RS05190;Dbxref=Genbank:WP_038271122.1;Name=WP_038271122.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300413.1;locus_tag=LPH41_RS05190;product=ribosome maturation factor RimP;protein_id=WP_038271122.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1141000 1141073 . - . ID=gene-LPH41_RS05195;Name=LPH41_RS05195;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05195;old_locus_tag=LPH41_05195 NZ_CP087680.1 tRNAscan-SE tRNA 1141000 1141073 . - . ID=rna-LPH41_RS05195;Parent=gene-LPH41_RS05195;anticodon=(pos:complement(1141037..1141039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05195;product=tRNA-Met NZ_CP087680.1 tRNAscan-SE exon 1141000 1141073 . - . ID=exon-LPH41_RS05195-1;Parent=rna-LPH41_RS05195;anticodon=(pos:complement(1141037..1141039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05195;product=tRNA-Met NZ_CP087680.1 RefSeq gene 1142966 1144474 . - . ID=gene-LPH41_RS05200;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LPH41_RS05200;old_locus_tag=LPH41_05200 NZ_CP087680.1 Protein Homology CDS 1142966 1144474 . - 0 ID=cds-WP_038271082.1;Parent=gene-LPH41_RS05200;Dbxref=Genbank:WP_038271082.1;Name=WP_038271082.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852608.1;locus_tag=LPH41_RS05200;product=glucose-6-phosphate isomerase;protein_id=WP_038271082.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1144478 1144858 . - . ID=gene-LPH41_RS05205;Name=LPH41_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05205;old_locus_tag=LPH41_05205 NZ_CP087680.1 Protein Homology CDS 1144478 1144858 . - 0 ID=cds-WP_038271081.1;Parent=gene-LPH41_RS05205;Dbxref=Genbank:WP_038271081.1;Name=WP_038271081.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036943.1;locus_tag=LPH41_RS05205;product=aspartate 1-decarboxylase;protein_id=WP_038271081.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1144943 1145788 . - . ID=gene-LPH41_RS05210;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LPH41_RS05210;old_locus_tag=LPH41_05210 NZ_CP087680.1 Protein Homology CDS 1144943 1145788 . - 0 ID=cds-WP_038271079.1;Parent=gene-LPH41_RS05210;Dbxref=Genbank:WP_038271079.1;Name=WP_038271079.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259031.1;locus_tag=LPH41_RS05210;product=pantoate--beta-alanine ligase;protein_id=WP_038271079.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1145785 1146603 . - . ID=gene-LPH41_RS05215;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LPH41_RS05215;old_locus_tag=LPH41_05215 NZ_CP087680.1 Protein Homology CDS 1145785 1146603 . - 0 ID=cds-WP_038271078.1;Parent=gene-LPH41_RS05215;Dbxref=Genbank:WP_038271078.1;Name=WP_038271078.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408567.1;locus_tag=LPH41_RS05215;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_038271078.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1146636 1147127 . - . ID=gene-LPH41_RS05220;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LPH41_RS05220;old_locus_tag=LPH41_05220 NZ_CP087680.1 Protein Homology CDS 1146636 1147127 . - 0 ID=cds-WP_038271121.1;Parent=gene-LPH41_RS05220;Dbxref=Genbank:WP_038271121.1;Name=WP_038271121.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097533.1;locus_tag=LPH41_RS05220;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_038271121.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1147148 1148416 . - . ID=gene-LPH41_RS05225;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LPH41_RS05225;old_locus_tag=LPH41_05225 NZ_CP087680.1 Protein Homology CDS 1147148 1148416 . - 0 ID=cds-WP_081755429.1;Parent=gene-LPH41_RS05225;Dbxref=Genbank:WP_081755429.1;Name=WP_081755429.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259034.1;locus_tag=LPH41_RS05225;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_081755429.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1148498 1148572 . + . ID=gene-LPH41_RS05230;Name=LPH41_RS05230;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05230;old_locus_tag=LPH41_05230 NZ_CP087680.1 tRNAscan-SE tRNA 1148498 1148572 . + . ID=rna-LPH41_RS05230;Parent=gene-LPH41_RS05230;anticodon=(pos:1148531..1148533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05230;product=tRNA-Glu NZ_CP087680.1 tRNAscan-SE exon 1148498 1148572 . + . ID=exon-LPH41_RS05230-1;Parent=rna-LPH41_RS05230;anticodon=(pos:1148531..1148533);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05230;product=tRNA-Glu NZ_CP087680.1 RefSeq gene 1148733 1149698 . - . ID=gene-LPH41_RS05235;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LPH41_RS05235;old_locus_tag=LPH41_05235 NZ_CP087680.1 Protein Homology CDS 1148733 1149698 . - 0 ID=cds-WP_038271076.1;Parent=gene-LPH41_RS05235;Dbxref=Genbank:WP_038271076.1;Name=WP_038271076.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438079.1;locus_tag=LPH41_RS05235;product=protein translocase subunit SecF;protein_id=WP_038271076.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1149718 1151562 . - . ID=gene-LPH41_RS05240;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LPH41_RS05240;old_locus_tag=LPH41_05240 NZ_CP087680.1 Protein Homology CDS 1149718 1151562 . - 0 ID=cds-WP_038271120.1;Parent=gene-LPH41_RS05240;Dbxref=Genbank:WP_038271120.1;Name=WP_038271120.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917104.1;locus_tag=LPH41_RS05240;product=protein translocase subunit SecD;protein_id=WP_038271120.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1151629 1151979 . - . ID=gene-LPH41_RS05245;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LPH41_RS05245;old_locus_tag=LPH41_05245 NZ_CP087680.1 Protein Homology CDS 1151629 1151979 . - 0 ID=cds-WP_038271074.1;Parent=gene-LPH41_RS05245;Dbxref=Genbank:WP_038271074.1;Name=WP_038271074.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014036867.1;locus_tag=LPH41_RS05245;product=preprotein translocase subunit YajC;protein_id=WP_038271074.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1152102 1153244 . - . ID=gene-LPH41_RS05250;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LPH41_RS05250;old_locus_tag=LPH41_05250 NZ_CP087680.1 Protein Homology CDS 1152102 1153244 . - 0 ID=cds-WP_038271073.1;Parent=gene-LPH41_RS05250;Dbxref=Genbank:WP_038271073.1;Name=WP_038271073.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086289.1;locus_tag=LPH41_RS05250;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_038271073.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1153693 1154518 . - . ID=gene-LPH41_RS05255;Name=LPH41_RS05255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS05255;old_locus_tag=LPH41_05255;pseudo=true NZ_CP087680.1 Protein Homology CDS 1153693 1154518 . - 0 ID=cds-LPH41_RS05255;Parent=gene-LPH41_RS05255;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892763.1;locus_tag=LPH41_RS05255;product=DUF885 family protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1154579 1154710 . - . ID=gene-LPH41_RS12005;Name=LPH41_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12005 NZ_CP087680.1 GeneMarkS-2+ CDS 1154579 1154710 . - 0 ID=cds-WP_267903165.1;Parent=gene-LPH41_RS12005;Dbxref=Genbank:WP_267903165.1;Name=WP_267903165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12005;product=hypothetical protein;protein_id=WP_267903165.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1154707 1156530 . - . ID=gene-LPH41_RS05260;Name=LPH41_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05260;old_locus_tag=LPH41_05260 NZ_CP087680.1 Protein Homology CDS 1154707 1156530 . - 0 ID=cds-WP_038271070.1;Parent=gene-LPH41_RS05260;Dbxref=Genbank:WP_038271070.1;Name=WP_038271070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920338.1;locus_tag=LPH41_RS05260;product=DUF885 family protein;protein_id=WP_038271070.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1156718 1157920 . - . ID=gene-LPH41_RS05265;Name=LPH41_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05265;old_locus_tag=LPH41_05265 NZ_CP087680.1 Protein Homology CDS 1156718 1157920 . - 0 ID=cds-WP_038271069.1;Parent=gene-LPH41_RS05265;Dbxref=Genbank:WP_038271069.1;Name=WP_038271069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086294.1;locus_tag=LPH41_RS05265;product=Xaa-Pro peptidase family protein;protein_id=WP_038271069.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1157917 1158177 . - . ID=gene-LPH41_RS05270;Name=LPH41_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05270;old_locus_tag=LPH41_05270 NZ_CP087680.1 Protein Homology CDS 1157917 1158177 . - 0 ID=cds-WP_152536604.1;Parent=gene-LPH41_RS05270;Dbxref=Genbank:WP_152536604.1;Name=WP_152536604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572971.1;locus_tag=LPH41_RS05270;product=hypothetical protein;protein_id=WP_152536604.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1159023 1159256 . + . ID=gene-LPH41_RS05275;Name=LPH41_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05275;old_locus_tag=LPH41_05275 NZ_CP087680.1 GeneMarkS-2+ CDS 1159023 1159256 . + 0 ID=cds-WP_171898039.1;Parent=gene-LPH41_RS05275;Dbxref=Genbank:WP_171898039.1;Name=WP_171898039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05275;product=hypothetical protein;protein_id=WP_171898039.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1159435 1159510 . + . ID=gene-LPH41_RS05280;Name=LPH41_RS05280;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05280;old_locus_tag=LPH41_05280 NZ_CP087680.1 tRNAscan-SE tRNA 1159435 1159510 . + . ID=rna-LPH41_RS05280;Parent=gene-LPH41_RS05280;anticodon=(pos:1159468..1159470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05280;product=tRNA-Ala NZ_CP087680.1 tRNAscan-SE exon 1159435 1159510 . + . ID=exon-LPH41_RS05280-1;Parent=rna-LPH41_RS05280;anticodon=(pos:1159468..1159470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05280;product=tRNA-Ala NZ_CP087680.1 RefSeq gene 1160610 1161842 . - . ID=gene-LPH41_RS05285;Name=LPH41_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05285;old_locus_tag=LPH41_05285 NZ_CP087680.1 Protein Homology CDS 1160610 1161842 . - 0 ID=cds-WP_038271067.1;Parent=gene-LPH41_RS05285;Dbxref=Genbank:WP_038271067.1;Name=WP_038271067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646541.1;locus_tag=LPH41_RS05285;product=porin;protein_id=WP_038271067.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1162080 1163093 . + . ID=gene-LPH41_RS05290;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LPH41_RS05290;old_locus_tag=LPH41_05290 NZ_CP087680.1 Protein Homology CDS 1162080 1163093 . + 0 ID=cds-WP_038271066.1;Parent=gene-LPH41_RS05290;Dbxref=Genbank:WP_038271066.1;Name=WP_038271066.1;Ontology_term=GO:0015415,GO:0042301,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=pstS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910159.1;locus_tag=LPH41_RS05290;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_038271066.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1163825 1164331 . - . ID=gene-LPH41_RS05295;Name=LPH41_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05295;old_locus_tag=LPH41_05295 NZ_CP087680.1 Protein Homology CDS 1163825 1164331 . - 0 ID=cds-WP_038271119.1;Parent=gene-LPH41_RS05295;Dbxref=Genbank:WP_038271119.1;Name=WP_038271119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852326.1;locus_tag=LPH41_RS05295;product=MarR family transcriptional regulator;protein_id=WP_038271119.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1165374 1166090 . - . ID=gene-LPH41_RS05300;Name=LPH41_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05300;old_locus_tag=LPH41_05300 NZ_CP087680.1 Protein Homology CDS 1165374 1166090 . - 0 ID=cds-WP_038271065.1;Parent=gene-LPH41_RS05300;Dbxref=Genbank:WP_038271065.1;Name=WP_038271065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097528.1;locus_tag=LPH41_RS05300;product=haloacid dehalogenase-like hydrolase;protein_id=WP_038271065.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1166087 1166881 . - . ID=gene-LPH41_RS05305;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LPH41_RS05305;old_locus_tag=LPH41_05305 NZ_CP087680.1 Protein Homology CDS 1166087 1166881 . - 0 ID=cds-WP_038271064.1;Parent=gene-LPH41_RS05305;Dbxref=Genbank:WP_038271064.1;Name=WP_038271064.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470238.1;locus_tag=LPH41_RS05305;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_038271064.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1166958 1167992 . - . ID=gene-LPH41_RS05310;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LPH41_RS05310;old_locus_tag=LPH41_05310 NZ_CP087680.1 Protein Homology CDS 1166958 1167992 . - 0 ID=cds-WP_038271063.1;Parent=gene-LPH41_RS05310;Dbxref=Genbank:WP_038271063.1;Name=WP_038271063.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572976.1;locus_tag=LPH41_RS05310;product=anthranilate phosphoribosyltransferase;protein_id=WP_038271063.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1168059 1168643 . - . ID=gene-LPH41_RS05315;Name=LPH41_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05315;old_locus_tag=LPH41_05315 NZ_CP087680.1 Protein Homology CDS 1168059 1168643 . - 0 ID=cds-WP_038271062.1;Parent=gene-LPH41_RS05315;Dbxref=Genbank:WP_038271062.1;Name=WP_038271062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892752.1;locus_tag=LPH41_RS05315;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_038271062.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1168824 1170299 . - . ID=gene-LPH41_RS05320;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LPH41_RS05320;old_locus_tag=LPH41_05320 NZ_CP087680.1 Protein Homology CDS 1168824 1170299 . - 0 ID=cds-WP_038271061.1;Parent=gene-LPH41_RS05320;Dbxref=Genbank:WP_038271061.1;Name=WP_038271061.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575582.1;locus_tag=LPH41_RS05320;product=anthranilate synthase component I;protein_id=WP_038271061.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1171445 1171858 . + . ID=gene-LPH41_RS05325;Name=LPH41_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05325;old_locus_tag=LPH41_05325 NZ_CP087680.1 GeneMarkS-2+ CDS 1171445 1171858 . + 0 ID=cds-WP_160165165.1;Parent=gene-LPH41_RS05325;Dbxref=Genbank:WP_160165165.1;Name=WP_160165165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05325;product=hypothetical protein;protein_id=WP_160165165.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1172971 1173642 . - . ID=gene-LPH41_RS05330;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LPH41_RS05330;old_locus_tag=LPH41_05330 NZ_CP087680.1 Protein Homology CDS 1172971 1173642 . - 0 ID=cds-WP_038271118.1;Parent=gene-LPH41_RS05330;Dbxref=Genbank:WP_038271118.1;Name=WP_038271118.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379428.1;locus_tag=LPH41_RS05330;product=ribulose-phosphate 3-epimerase;protein_id=WP_038271118.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1173692 1174021 . - . ID=gene-LPH41_RS05335;Name=LPH41_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05335;old_locus_tag=LPH41_05335 NZ_CP087680.1 Protein Homology CDS 1173692 1174021 . - 0 ID=cds-WP_038271059.1;Parent=gene-LPH41_RS05335;Dbxref=Genbank:WP_038271059.1;Name=WP_038271059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157937.1;locus_tag=LPH41_RS05335;product=DnaJ domain-containing protein;protein_id=WP_038271059.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1174514 1175440 . + . ID=gene-LPH41_RS05340;Name=LPH41_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05340;old_locus_tag=LPH41_05340 NZ_CP087680.1 Protein Homology CDS 1174514 1175440 . + 0 ID=cds-WP_038271058.1;Parent=gene-LPH41_RS05340;Dbxref=Genbank:WP_038271058.1;Name=WP_038271058.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448471.1;locus_tag=LPH41_RS05340;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_038271058.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1175939 1179520 . + . ID=gene-LPH41_RS05345;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LPH41_RS05345;old_locus_tag=LPH41_05345 NZ_CP087680.1 Protein Homology CDS 1175939 1179520 . + 0 ID=cds-WP_038271057.1;Parent=gene-LPH41_RS05345;Dbxref=Genbank:WP_038271057.1;Name=WP_038271057.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572983.1;locus_tag=LPH41_RS05345;product=DNA polymerase III subunit alpha;protein_id=WP_038271057.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1179615 1180574 . + . ID=gene-LPH41_RS05350;Name=LPH41_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05350;old_locus_tag=LPH41_05350 NZ_CP087680.1 Protein Homology CDS 1179615 1180574 . + 0 ID=cds-WP_038271056.1;Parent=gene-LPH41_RS05350;Dbxref=Genbank:WP_038271056.1;Name=WP_038271056.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578271.1;locus_tag=LPH41_RS05350;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_038271056.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1180741 1181193 . - . ID=gene-LPH41_RS05355;Name=LPH41_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05355;old_locus_tag=LPH41_05355 NZ_CP087680.1 Protein Homology CDS 1180741 1181193 . - 0 ID=cds-WP_038271055.1;Parent=gene-LPH41_RS05355;Dbxref=Genbank:WP_038271055.1;Name=WP_038271055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902407.1;locus_tag=LPH41_RS05355;product=CopD family protein;protein_id=WP_038271055.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1181267 1181857 . + . ID=gene-LPH41_RS05360;Name=LPH41_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05360;old_locus_tag=LPH41_05360 NZ_CP087680.1 Protein Homology CDS 1181267 1181857 . + 0 ID=cds-WP_038271053.1;Parent=gene-LPH41_RS05360;Dbxref=Genbank:WP_038271053.1;Name=WP_038271053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851431.1;locus_tag=LPH41_RS05360;product=class I SAM-dependent methyltransferase;protein_id=WP_038271053.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1182665 1183354 . + . ID=gene-LPH41_RS05365;Name=LPH41_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05365;old_locus_tag=LPH41_05365 NZ_CP087680.1 Protein Homology CDS 1182665 1183354 . + 0 ID=cds-WP_038271051.1;Parent=gene-LPH41_RS05365;Dbxref=Genbank:WP_038271051.1;Name=WP_038271051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467120.1;locus_tag=LPH41_RS05365;product=DUF502 domain-containing protein;protein_id=WP_038271051.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1184475 1185104 . - . ID=gene-LPH41_RS05370;Name=LPH41_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05370;old_locus_tag=LPH41_05370 NZ_CP087680.1 Protein Homology CDS 1184475 1185104 . - 0 ID=cds-WP_038271049.1;Parent=gene-LPH41_RS05370;Dbxref=Genbank:WP_038271049.1;Name=WP_038271049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035483.1;locus_tag=LPH41_RS05370;product=lysophospholipid acyltransferase family protein;protein_id=WP_038271049.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1185523 1186044 . + . ID=gene-LPH41_RS05375;Name=LPH41_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05375;old_locus_tag=LPH41_05375 NZ_CP087680.1 Protein Homology CDS 1185523 1186044 . + 0 ID=cds-WP_038271117.1;Parent=gene-LPH41_RS05375;Dbxref=Genbank:WP_038271117.1;Name=WP_038271117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572990.1;locus_tag=LPH41_RS05375;product=DUF2059 domain-containing protein;protein_id=WP_038271117.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1188021 1188374 . - . ID=gene-LPH41_RS05380;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LPH41_RS05380;old_locus_tag=LPH41_05380 NZ_CP087680.1 Protein Homology CDS 1188021 1188374 . - 0 ID=cds-WP_038271045.1;Parent=gene-LPH41_RS05380;Dbxref=Genbank:WP_038271045.1;Name=WP_038271045.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572991.1;locus_tag=LPH41_RS05380;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_038271045.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1188449 1189789 . - . ID=gene-LPH41_RS05385;Name=LPH41_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05385;old_locus_tag=LPH41_05385 NZ_CP087680.1 Protein Homology CDS 1188449 1189789 . - 0 ID=cds-WP_038271043.1;Parent=gene-LPH41_RS05385;Dbxref=Genbank:WP_038271043.1;Name=WP_038271043.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572992.1;locus_tag=LPH41_RS05385;product=DEAD/DEAH box helicase;protein_id=WP_038271043.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1190840 1190989 . - . ID=gene-LPH41_RS05390;Name=LPH41_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05390;old_locus_tag=LPH41_05390 NZ_CP087680.1 GeneMarkS-2+ CDS 1190840 1190989 . - 0 ID=cds-WP_160165164.1;Parent=gene-LPH41_RS05390;Dbxref=Genbank:WP_160165164.1;Name=WP_160165164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05390;product=hypothetical protein;protein_id=WP_160165164.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1191999 1192733 . - . ID=gene-LPH41_RS05395;Name=LPH41_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05395;old_locus_tag=LPH41_05395 NZ_CP087680.1 Protein Homology CDS 1191999 1192733 . - 0 ID=cds-WP_038271042.1;Parent=gene-LPH41_RS05395;Dbxref=Genbank:WP_038271042.1;Name=WP_038271042.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931477.1;locus_tag=LPH41_RS05395;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_038271042.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1192724 1194148 . - . ID=gene-LPH41_RS05400;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LPH41_RS05400;old_locus_tag=LPH41_05400 NZ_CP087680.1 Protein Homology CDS 1192724 1194148 . - 0 ID=cds-WP_038271040.1;Parent=gene-LPH41_RS05400;Dbxref=Genbank:WP_038271040.1;Name=WP_038271040.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382421.1;locus_tag=LPH41_RS05400;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_038271040.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1194217 1194765 . + . ID=gene-LPH41_RS05405;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=LPH41_RS05405;old_locus_tag=LPH41_05405 NZ_CP087680.1 Protein Homology CDS 1194217 1194765 . + 0 ID=cds-WP_038271039.1;Parent=gene-LPH41_RS05405;Dbxref=Genbank:WP_038271039.1;Name=WP_038271039.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382420.1;locus_tag=LPH41_RS05405;product=ADP compounds hydrolase NudE;protein_id=WP_038271039.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1194762 1195562 . + . ID=gene-LPH41_RS05410;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=LPH41_RS05410;old_locus_tag=LPH41_05410 NZ_CP087680.1 Protein Homology CDS 1194762 1195562 . + 0 ID=cds-WP_038271037.1;Parent=gene-LPH41_RS05410;Dbxref=Genbank:WP_038271037.1;Name=WP_038271037.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811298.1;locus_tag=LPH41_RS05410;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_038271037.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1195595 1196428 . + . ID=gene-LPH41_RS05415;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LPH41_RS05415;old_locus_tag=LPH41_05415 NZ_CP087680.1 Protein Homology CDS 1195595 1196428 . + 0 ID=cds-WP_038271035.1;Parent=gene-LPH41_RS05415;Dbxref=Genbank:WP_038271035.1;Name=WP_038271035.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087170.1;locus_tag=LPH41_RS05415;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_038271035.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1197111 1198067 . + . ID=gene-LPH41_RS05420;Name=LPH41_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05420;old_locus_tag=LPH41_05420 NZ_CP087680.1 Protein Homology CDS 1197111 1198067 . + 0 ID=cds-WP_038271034.1;Parent=gene-LPH41_RS05420;Dbxref=Genbank:WP_038271034.1;Name=WP_038271034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087172.1;locus_tag=LPH41_RS05420;product=SPFH/Band 7/PHB domain protein;protein_id=WP_038271034.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1198071 1198508 . + . ID=gene-LPH41_RS05425;Name=LPH41_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05425;old_locus_tag=LPH41_05425 NZ_CP087680.1 Protein Homology CDS 1198071 1198508 . + 0 ID=cds-WP_038271033.1;Parent=gene-LPH41_RS05425;Dbxref=Genbank:WP_038271033.1;Name=WP_038271033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343187.1;locus_tag=LPH41_RS05425;product=NfeD family protein;protein_id=WP_038271033.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1198661 1199767 . + . ID=gene-LPH41_RS05430;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LPH41_RS05430;old_locus_tag=LPH41_05430 NZ_CP087680.1 Protein Homology CDS 1198661 1199767 . + 0 ID=cds-WP_038271032.1;Parent=gene-LPH41_RS05430;Dbxref=Genbank:WP_038271032.1;Name=WP_038271032.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851419.1;locus_tag=LPH41_RS05430;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_038271032.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1200534 1200929 . + . ID=gene-LPH41_RS05435;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LPH41_RS05435;old_locus_tag=LPH41_05435 NZ_CP087680.1 Protein Homology CDS 1200534 1200929 . + 0 ID=cds-WP_038271031.1;Parent=gene-LPH41_RS05435;Dbxref=Genbank:WP_038271031.1;Name=WP_038271031.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087179.1;locus_tag=LPH41_RS05435;product=glycine cleavage system protein GcvH;protein_id=WP_038271031.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1202284 1202676 . + . ID=gene-LPH41_RS05440;Name=LPH41_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05440;old_locus_tag=LPH41_05440 NZ_CP087680.1 Protein Homology CDS 1202284 1202676 . + 0 ID=cds-WP_038271030.1;Parent=gene-LPH41_RS05440;Dbxref=Genbank:WP_038271030.1;Name=WP_038271030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933739.1;locus_tag=LPH41_RS05440;product=hypothetical protein;protein_id=WP_038271030.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1204152 1204922 . - . ID=gene-LPH41_RS05445;Name=LPH41_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05445;old_locus_tag=LPH41_05445 NZ_CP087680.1 Protein Homology CDS 1204152 1204922 . - 0 ID=cds-WP_038271029.1;Parent=gene-LPH41_RS05445;Dbxref=Genbank:WP_038271029.1;Name=WP_038271029.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087181.1;locus_tag=LPH41_RS05445;product=glycine zipper 2TM domain-containing protein;protein_id=WP_038271029.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1205260 1206042 . + . ID=gene-LPH41_RS05450;Name=LPH41_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05450;old_locus_tag=LPH41_05450 NZ_CP087680.1 Protein Homology CDS 1205260 1206042 . + 0 ID=cds-WP_038271027.1;Parent=gene-LPH41_RS05450;Dbxref=Genbank:WP_038271027.1;Name=WP_038271027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087182.1;locus_tag=LPH41_RS05450;product=TatD family hydrolase;protein_id=WP_038271027.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1207221 1208234 . + . ID=gene-LPH41_RS05455;Name=LPH41_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05455;old_locus_tag=LPH41_05455 NZ_CP087680.1 Protein Homology CDS 1207221 1208234 . + 0 ID=cds-WP_038271025.1;Parent=gene-LPH41_RS05455;Dbxref=Genbank:WP_038271025.1;Name=WP_038271025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097517.1;locus_tag=LPH41_RS05455;product=glycosyltransferase family 2 protein;protein_id=WP_038271025.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1208953 1209597 . - . ID=gene-LPH41_RS05460;Name=LPH41_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05460;old_locus_tag=LPH41_05460 NZ_CP087680.1 Protein Homology CDS 1208953 1209597 . - 0 ID=cds-WP_038271024.1;Parent=gene-LPH41_RS05460;Dbxref=Genbank:WP_038271024.1;Name=WP_038271024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301897.1;locus_tag=LPH41_RS05460;product=hemolysin III family protein;protein_id=WP_038271024.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1209678 1211282 . - . ID=gene-LPH41_RS05465;Name=LPH41_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05465;old_locus_tag=LPH41_05465 NZ_CP087680.1 Protein Homology CDS 1209678 1211282 . - 0 ID=cds-WP_038271116.1;Parent=gene-LPH41_RS05465;Dbxref=Genbank:WP_038271116.1;Name=WP_038271116.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085050.1;locus_tag=LPH41_RS05465;product=peptide chain release factor 3;protein_id=WP_038271116.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1213182 1213922 . + . ID=gene-LPH41_RS05470;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LPH41_RS05470;old_locus_tag=LPH41_05470 NZ_CP087680.1 Protein Homology CDS 1213182 1213922 . + 0 ID=cds-WP_038271021.1;Parent=gene-LPH41_RS05470;Dbxref=Genbank:WP_038271021.1;Name=WP_038271021.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017909512.1;locus_tag=LPH41_RS05470;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_038271021.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1215799 1215966 . - . ID=gene-LPH41_RS05475;Name=LPH41_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05475;old_locus_tag=LPH41_05475 NZ_CP087680.1 GeneMarkS-2+ CDS 1215799 1215966 . - 0 ID=cds-WP_160165163.1;Parent=gene-LPH41_RS05475;Dbxref=Genbank:WP_160165163.1;Name=WP_160165163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05475;product=hypothetical protein;protein_id=WP_160165163.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1216294 1216518 . + . ID=gene-LPH41_RS05480;Name=LPH41_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05480;old_locus_tag=LPH41_05480 NZ_CP087680.1 GeneMarkS-2+ CDS 1216294 1216518 . + 0 ID=cds-WP_162814079.1;Parent=gene-LPH41_RS05480;Dbxref=Genbank:WP_162814079.1;Name=WP_162814079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05480;product=hypothetical protein;protein_id=WP_162814079.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1217582 1219459 . - . ID=gene-LPH41_RS05485;Name=LPH41_RS05485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS05485;old_locus_tag=LPH41_05485;partial=true;pseudo=true;start_range=.,1217582 NZ_CP087680.1 Protein Homology CDS 1217582 1219459 . - 0 ID=cds-LPH41_RS05485;Parent=gene-LPH41_RS05485;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087191.1;locus_tag=LPH41_RS05485;partial=true;product=DUF885 family protein;pseudo=true;start_range=.,1217582;transl_table=11 NZ_CP087680.1 RefSeq gene 1220026 1220790 . + . ID=gene-LPH41_RS05490;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LPH41_RS05490;old_locus_tag=LPH41_05490 NZ_CP087680.1 Protein Homology CDS 1220026 1220790 . + 0 ID=cds-WP_038273056.1;Parent=gene-LPH41_RS05490;Dbxref=Genbank:WP_038273056.1;Name=WP_038273056.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085053.1;locus_tag=LPH41_RS05490;product=cytochrome c biogenesis protein CcsA;protein_id=WP_038273056.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1220893 1221708 . - . ID=gene-LPH41_RS05495;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LPH41_RS05495;old_locus_tag=LPH41_05495 NZ_CP087680.1 Protein Homology CDS 1220893 1221708 . - 0 ID=cds-WP_038273054.1;Parent=gene-LPH41_RS05495;Dbxref=Genbank:WP_038273054.1;Name=WP_038273054.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085054.1;locus_tag=LPH41_RS05495;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_038273054.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1221859 1221972 . - . ID=gene-LPH41_RS05500;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LPH41_RS05500;old_locus_tag=LPH41_05500 NZ_CP087680.1 cmsearch rRNA 1221859 1221972 . - . ID=rna-LPH41_RS05500;Parent=gene-LPH41_RS05500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05500;product=5S ribosomal RNA NZ_CP087680.1 cmsearch exon 1221859 1221972 . - . ID=exon-LPH41_RS05500-1;Parent=rna-LPH41_RS05500;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05500;product=5S ribosomal RNA NZ_CP087680.1 RefSeq gene 1222103 1224981 . - . ID=gene-LPH41_RS05505;Name=LPH41_RS05505;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH41_RS05505;old_locus_tag=LPH41_05505 NZ_CP087680.1 cmsearch rRNA 1222103 1224981 . - . ID=rna-LPH41_RS05505;Parent=gene-LPH41_RS05505;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05505;product=23S ribosomal RNA NZ_CP087680.1 cmsearch exon 1222103 1224981 . - . ID=exon-LPH41_RS05505-1;Parent=rna-LPH41_RS05505;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05505;product=23S ribosomal RNA NZ_CP087680.1 RefSeq gene 1225200 1225276 . - . ID=gene-LPH41_RS05510;Name=LPH41_RS05510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05510;old_locus_tag=LPH41_05510 NZ_CP087680.1 tRNAscan-SE tRNA 1225200 1225276 . - . ID=rna-LPH41_RS05510;Parent=gene-LPH41_RS05510;anticodon=(pos:complement(1225240..1225242));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05510;product=tRNA-Ile NZ_CP087680.1 tRNAscan-SE exon 1225200 1225276 . - . ID=exon-LPH41_RS05510-1;Parent=rna-LPH41_RS05510;anticodon=(pos:complement(1225240..1225242));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05510;product=tRNA-Ile NZ_CP087680.1 RefSeq gene 1225288 1225363 . - . ID=gene-LPH41_RS05515;Name=LPH41_RS05515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05515;old_locus_tag=LPH41_05515 NZ_CP087680.1 tRNAscan-SE tRNA 1225288 1225363 . - . ID=rna-LPH41_RS05515;Parent=gene-LPH41_RS05515;anticodon=(pos:complement(1225328..1225330));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05515;product=tRNA-Ala NZ_CP087680.1 tRNAscan-SE exon 1225288 1225363 . - . ID=exon-LPH41_RS05515-1;Parent=rna-LPH41_RS05515;anticodon=(pos:complement(1225328..1225330));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05515;product=tRNA-Ala NZ_CP087680.1 RefSeq gene 1225458 1227002 . - . ID=gene-LPH41_RS05520;Name=LPH41_RS05520;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH41_RS05520;old_locus_tag=LPH41_05520 NZ_CP087680.1 cmsearch rRNA 1225458 1227002 . - . ID=rna-LPH41_RS05520;Parent=gene-LPH41_RS05520;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05520;product=16S ribosomal RNA NZ_CP087680.1 cmsearch exon 1225458 1227002 . - . ID=exon-LPH41_RS05520-1;Parent=rna-LPH41_RS05520;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05520;product=16S ribosomal RNA NZ_CP087680.1 RefSeq gene 1227782 1229002 . - . ID=gene-LPH41_RS05525;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LPH41_RS05525;old_locus_tag=LPH41_05525 NZ_CP087680.1 Protein Homology CDS 1227782 1229002 . - 0 ID=cds-WP_038272327.1;Parent=gene-LPH41_RS05525;Dbxref=Genbank:WP_038272327.1;Name=WP_038272327.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087787.1;locus_tag=LPH41_RS05525;product=tyrosine--tRNA ligase;protein_id=WP_038272327.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1229179 1230591 . + . ID=gene-LPH41_RS05530;Name=LPH41_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05530;old_locus_tag=LPH41_05530 NZ_CP087680.1 Protein Homology CDS 1229179 1230591 . + 0 ID=cds-WP_038272330.1;Parent=gene-LPH41_RS05530;Dbxref=Genbank:WP_038272330.1;Name=WP_038272330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337570.1;locus_tag=LPH41_RS05530;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_038272330.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1230679 1231812 . + . ID=gene-LPH41_RS05535;Name=LPH41_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05535;old_locus_tag=LPH41_05535 NZ_CP087680.1 Protein Homology CDS 1230679 1231812 . + 0 ID=cds-WP_038272403.1;Parent=gene-LPH41_RS05535;Dbxref=Genbank:WP_038272403.1;Name=WP_038272403.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348848.1;locus_tag=LPH41_RS05535;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_038272403.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1231965 1233494 . - . ID=gene-LPH41_RS05540;Name=LPH41_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05540;old_locus_tag=LPH41_05540 NZ_CP087680.1 Protein Homology CDS 1231965 1233494 . - 0 ID=cds-WP_038272331.1;Parent=gene-LPH41_RS05540;Dbxref=Genbank:WP_038272331.1;Name=WP_038272331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852671.1;locus_tag=LPH41_RS05540;product=MFS transporter;protein_id=WP_038272331.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1233491 1234291 . - . ID=gene-LPH41_RS05545;Name=LPH41_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05545;old_locus_tag=LPH41_05545 NZ_CP087680.1 Protein Homology CDS 1233491 1234291 . - 0 ID=cds-WP_038272332.1;Parent=gene-LPH41_RS05545;Dbxref=Genbank:WP_038272332.1;Name=WP_038272332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852672.1;locus_tag=LPH41_RS05545;product=exodeoxyribonuclease III;protein_id=WP_038272332.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1234917 1235252 . + . ID=gene-LPH41_RS05550;Name=LPH41_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05550;old_locus_tag=LPH41_05550 NZ_CP087680.1 GeneMarkS-2+ CDS 1234917 1235252 . + 0 ID=cds-WP_152536654.1;Parent=gene-LPH41_RS05550;Dbxref=Genbank:WP_152536654.1;Name=WP_152536654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05550;product=hypothetical protein;protein_id=WP_152536654.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1236910 1237866 . - . ID=gene-LPH41_RS05555;Name=LPH41_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05555;old_locus_tag=LPH41_05555 NZ_CP087680.1 Protein Homology CDS 1236910 1237866 . - 0 ID=cds-WP_230428147.1;Parent=gene-LPH41_RS05555;Dbxref=Genbank:WP_230428147.1;Name=WP_230428147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.2;locus_tag=LPH41_RS05555;product=DUF2326 domain-containing protein;protein_id=WP_230428147.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1237996 1238358 . - . ID=gene-LPH41_RS05560;Name=LPH41_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05560;old_locus_tag=LPH41_05560 NZ_CP087680.1 GeneMarkS-2+ CDS 1237996 1238358 . - 0 ID=cds-WP_230428146.1;Parent=gene-LPH41_RS05560;Dbxref=Genbank:WP_230428146.1;Name=WP_230428146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05560;product=hypothetical protein;protein_id=WP_230428146.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1238671 1238940 . - . ID=gene-LPH41_RS05565;Name=LPH41_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05565;old_locus_tag=LPH41_05565 NZ_CP087680.1 Protein Homology CDS 1238671 1238940 . - 0 ID=cds-WP_038272337.1;Parent=gene-LPH41_RS05565;Dbxref=Genbank:WP_038272337.1;Name=WP_038272337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852674.1;locus_tag=LPH41_RS05565;product=hypothetical protein;protein_id=WP_038272337.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1238924 1239757 . - . ID=gene-LPH41_RS05570;Name=LPH41_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05570;old_locus_tag=LPH41_05570 NZ_CP087680.1 Protein Homology CDS 1238924 1239757 . - 0 ID=cds-WP_230428145.1;Parent=gene-LPH41_RS05570;Dbxref=Genbank:WP_230428145.1;Name=WP_230428145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085503.1;locus_tag=LPH41_RS05570;product=restriction endonuclease;protein_id=WP_230428145.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1241246 1242061 . + . ID=gene-LPH41_RS05575;Name=LPH41_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05575;old_locus_tag=LPH41_05575 NZ_CP087680.1 Protein Homology CDS 1241246 1242061 . + 0 ID=cds-WP_038272339.1;Parent=gene-LPH41_RS05575;Dbxref=Genbank:WP_038272339.1;Name=WP_038272339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892701.1;locus_tag=LPH41_RS05575;product=C39 family peptidase;protein_id=WP_038272339.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1242364 1243173 . - . ID=gene-LPH41_RS05580;Name=LPH41_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05580;old_locus_tag=LPH41_05580 NZ_CP087680.1 Protein Homology CDS 1242364 1243173 . - 0 ID=cds-WP_038272342.1;Parent=gene-LPH41_RS05580;Dbxref=Genbank:WP_038272342.1;Name=WP_038272342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085505.1;locus_tag=LPH41_RS05580;product=DUF3289 family protein;protein_id=WP_038272342.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1243747 1244406 . + . ID=gene-LPH41_RS05585;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LPH41_RS05585;old_locus_tag=LPH41_05585 NZ_CP087680.1 Protein Homology CDS 1243747 1244406 . + 0 ID=cds-WP_038272344.1;Parent=gene-LPH41_RS05585;Dbxref=Genbank:WP_038272344.1;Name=WP_038272344.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374714.1;locus_tag=LPH41_RS05585;product=orotate phosphoribosyltransferase;protein_id=WP_038272344.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1244430 1245116 . + . ID=gene-LPH41_RS05590;Name=LPH41_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05590;old_locus_tag=LPH41_05590 NZ_CP087680.1 Protein Homology CDS 1244430 1245116 . + 0 ID=cds-WP_038272347.1;Parent=gene-LPH41_RS05590;Dbxref=Genbank:WP_038272347.1;Name=WP_038272347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085507.1;locus_tag=LPH41_RS05590;product=hypothetical protein;protein_id=WP_038272347.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1245123 1247483 . - . ID=gene-LPH41_RS05595;Name=LPH41_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05595;old_locus_tag=LPH41_05595 NZ_CP087680.1 Protein Homology CDS 1245123 1247483 . - 0 ID=cds-WP_038272350.1;Parent=gene-LPH41_RS05595;Dbxref=Genbank:WP_038272350.1;Name=WP_038272350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085508.1;locus_tag=LPH41_RS05595;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_038272350.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1247497 1247964 . - . ID=gene-LPH41_RS05600;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LPH41_RS05600;old_locus_tag=LPH41_05600 NZ_CP087680.1 Protein Homology CDS 1247497 1247964 . - 0 ID=cds-WP_038272353.1;Parent=gene-LPH41_RS05600;Dbxref=Genbank:WP_038272353.1;Name=WP_038272353.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087579.1;locus_tag=LPH41_RS05600;product=dUTP diphosphatase;protein_id=WP_038272353.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1247961 1249190 . - . ID=gene-LPH41_RS05605;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LPH41_RS05605;old_locus_tag=LPH41_05605 NZ_CP087680.1 Protein Homology CDS 1247961 1249190 . - 0 ID=cds-WP_038272355.1;Parent=gene-LPH41_RS05605;Dbxref=Genbank:WP_038272355.1;Name=WP_038272355.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964144.1;locus_tag=LPH41_RS05605;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_038272355.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1249288 1249962 . + . ID=gene-LPH41_RS05610;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LPH41_RS05610;old_locus_tag=LPH41_05610 NZ_CP087680.1 Protein Homology CDS 1249288 1249962 . + 0 ID=cds-WP_038272357.1;Parent=gene-LPH41_RS05610;Dbxref=Genbank:WP_038272357.1;Name=WP_038272357.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097508.1;locus_tag=LPH41_RS05610;product=DNA repair protein RadC;protein_id=WP_038272357.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1250089 1251777 . + . ID=gene-LPH41_RS05615;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LPH41_RS05615;old_locus_tag=LPH41_05615 NZ_CP087680.1 Protein Homology CDS 1250089 1251777 . + 0 ID=cds-WP_038272360.1;Parent=gene-LPH41_RS05615;Dbxref=Genbank:WP_038272360.1;Name=WP_038272360.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300787.1;locus_tag=LPH41_RS05615;product=arginine--tRNA ligase;protein_id=WP_038272360.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1251817 1252614 . + . ID=gene-LPH41_RS05620;Name=LPH41_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05620;old_locus_tag=LPH41_05620 NZ_CP087680.1 Protein Homology CDS 1251817 1252614 . + 0 ID=cds-WP_038272365.1;Parent=gene-LPH41_RS05620;Dbxref=Genbank:WP_038272365.1;Name=WP_038272365.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085513.1;locus_tag=LPH41_RS05620;product=SPOR domain-containing protein;protein_id=WP_038272365.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1252710 1253465 . + . ID=gene-LPH41_RS05625;Name=LPH41_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05625;old_locus_tag=LPH41_05625 NZ_CP087680.1 Protein Homology CDS 1252710 1253465 . + 0 ID=cds-WP_038272367.1;Parent=gene-LPH41_RS05625;Dbxref=Genbank:WP_038272367.1;Name=WP_038272367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995556.1;locus_tag=LPH41_RS05625;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038272367.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1253902 1255788 . - . ID=gene-LPH41_RS05630;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LPH41_RS05630;old_locus_tag=LPH41_05630 NZ_CP087680.1 Protein Homology CDS 1253902 1255788 . - 0 ID=cds-WP_038272368.1;Parent=gene-LPH41_RS05630;Dbxref=Genbank:WP_038272368.1;Name=WP_038272368.1;Ontology_term=GO:0008295,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892689.1;locus_tag=LPH41_RS05630;product=arginine decarboxylase;protein_id=WP_038272368.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1256007 1256864 . + . ID=gene-LPH41_RS05635;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LPH41_RS05635;old_locus_tag=LPH41_05635 NZ_CP087680.1 Protein Homology CDS 1256007 1256864 . + 0 ID=cds-WP_038272371.1;Parent=gene-LPH41_RS05635;Dbxref=Genbank:WP_038272371.1;Name=WP_038272371.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305070.1;locus_tag=LPH41_RS05635;product=polyamine aminopropyltransferase;protein_id=WP_038272371.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1257318 1257665 . + . ID=gene-LPH41_RS05640;Name=LPH41_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05640;old_locus_tag=LPH41_05640 NZ_CP087680.1 GeneMarkS-2+ CDS 1257318 1257665 . + 0 ID=cds-WP_038272374.1;Parent=gene-LPH41_RS05640;Dbxref=Genbank:WP_038272374.1;Name=WP_038272374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05640;product=hypothetical protein;protein_id=WP_038272374.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1258092 1258688 . + . ID=gene-LPH41_RS05645;Name=LPH41_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05645;old_locus_tag=LPH41_05645 NZ_CP087680.1 Protein Homology CDS 1258092 1258688 . + 0 ID=cds-WP_230428144.1;Parent=gene-LPH41_RS05645;Dbxref=Genbank:WP_230428144.1;Name=WP_230428144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016207.2;locus_tag=LPH41_RS05645;product=FMN-binding negative transcriptional regulator;protein_id=WP_230428144.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1258882 1260711 . - . ID=gene-LPH41_RS05650;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LPH41_RS05650;old_locus_tag=LPH41_05650 NZ_CP087680.1 Protein Homology CDS 1258882 1260711 . - 0 ID=cds-WP_038272409.1;Parent=gene-LPH41_RS05650;Dbxref=Genbank:WP_038272409.1;Name=WP_038272409.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159863.1;locus_tag=LPH41_RS05650;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_038272409.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1261562 1261831 . + . ID=gene-LPH41_RS05655;Name=LPH41_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05655;old_locus_tag=LPH41_05655 NZ_CP087680.1 GeneMarkS-2+ CDS 1261562 1261831 . + 0 ID=cds-WP_152536655.1;Parent=gene-LPH41_RS05655;Dbxref=Genbank:WP_152536655.1;Name=WP_152536655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05655;product=hypothetical protein;protein_id=WP_152536655.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1262034 1263143 . - . ID=gene-LPH41_RS05660;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LPH41_RS05660;old_locus_tag=LPH41_05660 NZ_CP087680.1 Protein Homology CDS 1262034 1263143 . - 0 ID=cds-WP_038272383.1;Parent=gene-LPH41_RS05660;Dbxref=Genbank:WP_038272383.1;Name=WP_038272383.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085518.1;locus_tag=LPH41_RS05660;product=LPS export ABC transporter permease LptG;protein_id=WP_038272383.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1263140 1264222 . - . ID=gene-LPH41_RS05665;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LPH41_RS05665;old_locus_tag=LPH41_05665 NZ_CP087680.1 Protein Homology CDS 1263140 1264222 . - 0 ID=cds-WP_038272386.1;Parent=gene-LPH41_RS05665;Dbxref=Genbank:WP_038272386.1;Name=WP_038272386.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852559.1;locus_tag=LPH41_RS05665;product=LPS export ABC transporter permease LptF;protein_id=WP_038272386.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1264332 1265807 . + . ID=gene-LPH41_RS05670;Name=LPH41_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05670;old_locus_tag=LPH41_05670 NZ_CP087680.1 Protein Homology CDS 1264332 1265807 . + 0 ID=cds-WP_038272389.1;Parent=gene-LPH41_RS05670;Dbxref=Genbank:WP_038272389.1;Name=WP_038272389.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087599.1;locus_tag=LPH41_RS05670;product=leucyl aminopeptidase;protein_id=WP_038272389.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1265801 1266259 . + . ID=gene-LPH41_RS05675;Name=LPH41_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05675;old_locus_tag=LPH41_05675 NZ_CP087680.1 Protein Homology CDS 1265801 1266259 . + 0 ID=cds-WP_051482367.1;Parent=gene-LPH41_RS05675;Dbxref=Genbank:WP_051482367.1;Name=WP_051482367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607562.1;locus_tag=LPH41_RS05675;product=hypothetical protein;protein_id=WP_051482367.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1266259 1266684 . + . ID=gene-LPH41_RS05680;Name=LPH41_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05680;old_locus_tag=LPH41_05680 NZ_CP087680.1 Protein Homology CDS 1266259 1266684 . + 0 ID=cds-WP_038272394.1;Parent=gene-LPH41_RS05680;Dbxref=Genbank:WP_038272394.1;Name=WP_038272394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902887.1;locus_tag=LPH41_RS05680;product=DNA polymerase III subunit chi;protein_id=WP_038272394.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1266719 1266916 . + . ID=gene-LPH41_RS05685;Name=LPH41_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05685;old_locus_tag=LPH41_05685 NZ_CP087680.1 Protein Homology CDS 1266719 1266916 . + 0 ID=cds-WP_038272397.1;Parent=gene-LPH41_RS05685;Dbxref=Genbank:WP_038272397.1;Name=WP_038272397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097503.1;locus_tag=LPH41_RS05685;product=hypothetical protein;protein_id=WP_038272397.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1266954 1269920 . + . ID=gene-LPH41_RS05690;Name=LPH41_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05690;old_locus_tag=LPH41_05690 NZ_CP087680.1 Protein Homology CDS 1266954 1269920 . + 0 ID=cds-WP_038272400.1;Parent=gene-LPH41_RS05690;Dbxref=Genbank:WP_038272400.1;Name=WP_038272400.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087603.1;locus_tag=LPH41_RS05690;product=valine--tRNA ligase;protein_id=WP_038272400.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1270576 1271901 . - . ID=gene-LPH41_RS05695;Name=LPH41_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05695;old_locus_tag=LPH41_05695 NZ_CP087680.1 Protein Homology CDS 1270576 1271901 . - 0 ID=cds-WP_230439329.1;Parent=gene-LPH41_RS05695;Dbxref=Genbank:WP_230439329.1;Name=WP_230439329.1;Ontology_term=GO:0006878,GO:0005507,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=copper ion binding|0005507||IEA;go_process=cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: protein motif:HMM:NF017119.2;locus_tag=LPH41_RS05695;product=copper resistance protein B;protein_id=WP_230439329.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1271898 1273721 . - . ID=gene-LPH41_RS05700;Name=LPH41_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05700;old_locus_tag=LPH41_05700 NZ_CP087680.1 Protein Homology CDS 1271898 1273721 . - 0 ID=cds-WP_038271792.1;Parent=gene-LPH41_RS05700;Dbxref=Genbank:WP_038271792.1;Name=WP_038271792.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507;gbkey=CDS;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337562.1;locus_tag=LPH41_RS05700;product=copper resistance system multicopper oxidase;protein_id=WP_038271792.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1273824 1274279 . - . ID=gene-LPH41_RS05705;Name=LPH41_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05705;old_locus_tag=LPH41_05705 NZ_CP087680.1 Protein Homology CDS 1273824 1274279 . - 0 ID=cds-WP_230439330.1;Parent=gene-LPH41_RS05705;Dbxref=Genbank:WP_230439330.1;Name=WP_230439330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852913.1;locus_tag=LPH41_RS05705;product=CopL family metal-binding regulatory protein;protein_id=WP_230439330.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1274607 1275713 . + . ID=gene-LPH41_RS05710;Name=LPH41_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05710;old_locus_tag=LPH41_05710 NZ_CP087680.1 Protein Homology CDS 1274607 1275713 . + 0 ID=cds-WP_038271794.1;Parent=gene-LPH41_RS05710;Dbxref=Genbank:WP_038271794.1;Name=WP_038271794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304765.1;locus_tag=LPH41_RS05710;product=PLP-dependent cysteine synthase family protein;protein_id=WP_038271794.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1275772 1277796 . + . ID=gene-LPH41_RS05715;Name=LPH41_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05715;old_locus_tag=LPH41_05715 NZ_CP087680.1 Protein Homology CDS 1275772 1277796 . + 0 ID=cds-WP_038271796.1;Parent=gene-LPH41_RS05715;Dbxref=Genbank:WP_038271796.1;Name=WP_038271796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892672.1;locus_tag=LPH41_RS05715;product=M3 family metallopeptidase;protein_id=WP_038271796.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1278797 1278889 . - . ID=gene-LPH41_RS05720;Name=LPH41_RS05720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05720;old_locus_tag=LPH41_05720 NZ_CP087680.1 tRNAscan-SE tRNA 1278797 1278889 . - . ID=rna-LPH41_RS05720;Parent=gene-LPH41_RS05720;anticodon=(pos:complement(1278853..1278855));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05720;product=tRNA-Ser NZ_CP087680.1 tRNAscan-SE exon 1278797 1278889 . - . ID=exon-LPH41_RS05720-1;Parent=rna-LPH41_RS05720;anticodon=(pos:complement(1278853..1278855));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05720;product=tRNA-Ser NZ_CP087680.1 RefSeq gene 1278967 1279182 . - . ID=gene-LPH41_RS05725;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=LPH41_RS05725;old_locus_tag=LPH41_05725 NZ_CP087680.1 Protein Homology CDS 1278967 1279182 . - 0 ID=cds-WP_038271798.1;Parent=gene-LPH41_RS05725;Dbxref=Genbank:WP_038271798.1;Name=WP_038271798.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085529.1;locus_tag=LPH41_RS05725;product=carbon storage regulator CsrA;protein_id=WP_038271798.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1279322 1281973 . - . ID=gene-LPH41_RS05730;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LPH41_RS05730;old_locus_tag=LPH41_05730 NZ_CP087680.1 Protein Homology CDS 1279322 1281973 . - 0 ID=cds-WP_038271800.1;Parent=gene-LPH41_RS05730;Dbxref=Genbank:WP_038271800.1;Name=WP_038271800.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087615.1;locus_tag=LPH41_RS05730;product=alanine--tRNA ligase;protein_id=WP_038271800.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1282689 1283726 . - . ID=gene-LPH41_RS05735;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LPH41_RS05735;old_locus_tag=LPH41_05735 NZ_CP087680.1 Protein Homology CDS 1282689 1283726 . - 0 ID=cds-WP_038271801.1;Parent=gene-LPH41_RS05735;Dbxref=Genbank:WP_038271801.1;Name=WP_038271801.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992375.1;locus_tag=LPH41_RS05735;product=recombinase RecA;protein_id=WP_038271801.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1283907 1284542 . - . ID=gene-LPH41_RS05740;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LPH41_RS05740;old_locus_tag=LPH41_05740 NZ_CP087680.1 Protein Homology CDS 1283907 1284542 . - 0 ID=cds-WP_038271803.1;Parent=gene-LPH41_RS05740;Dbxref=Genbank:WP_038271803.1;Name=WP_038271803.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269877.1;locus_tag=LPH41_RS05740;product=transcriptional repressor LexA;protein_id=WP_038271803.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1285380 1285535 . + . ID=gene-LPH41_RS05745;Name=LPH41_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05745;old_locus_tag=LPH41_05745 NZ_CP087680.1 GeneMarkS-2+ CDS 1285380 1285535 . + 0 ID=cds-WP_160165196.1;Parent=gene-LPH41_RS05745;Dbxref=Genbank:WP_160165196.1;Name=WP_160165196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05745;product=hypothetical protein;protein_id=WP_160165196.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1286442 1287470 . - . ID=gene-LPH41_RS05750;Name=LPH41_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05750;old_locus_tag=LPH41_05750 NZ_CP087680.1 Protein Homology CDS 1286442 1287470 . - 0 ID=cds-WP_201745795.1;Parent=gene-LPH41_RS05750;Dbxref=Genbank:WP_201745795.1;Name=WP_201745795.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085533.1;locus_tag=LPH41_RS05750;product=nitronate monooxygenase;protein_id=WP_201745795.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1288960 1289985 . + . ID=gene-LPH41_RS05755;Name=LPH41_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05755;old_locus_tag=LPH41_05755 NZ_CP087680.1 Protein Homology CDS 1288960 1289985 . + 0 ID=cds-WP_038271810.1;Parent=gene-LPH41_RS05755;Dbxref=Genbank:WP_038271810.1;Name=WP_038271810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155705.1;locus_tag=LPH41_RS05755;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_038271810.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1290044 1291735 . - . ID=gene-LPH41_RS05760;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LPH41_RS05760;old_locus_tag=LPH41_05760 NZ_CP087680.1 Protein Homology CDS 1290044 1291735 . - 0 ID=cds-WP_038271812.1;Parent=gene-LPH41_RS05760;Dbxref=Genbank:WP_038271812.1;Name=WP_038271812.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268785.1;locus_tag=LPH41_RS05760;product=asparagine synthase B;protein_id=WP_038271812.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1292137 1293270 . - . ID=gene-LPH41_RS05765;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LPH41_RS05765;old_locus_tag=LPH41_05765 NZ_CP087680.1 Protein Homology CDS 1292137 1293270 . - 0 ID=cds-WP_038271813.1;Parent=gene-LPH41_RS05765;Dbxref=Genbank:WP_038271813.1;Name=WP_038271813.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097497.1;locus_tag=LPH41_RS05765;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_038271813.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1293421 1293777 . - . ID=gene-LPH41_RS05770;Name=LPH41_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05770;old_locus_tag=LPH41_05770 NZ_CP087680.1 Protein Homology CDS 1293421 1293777 . - 0 ID=cds-WP_038271816.1;Parent=gene-LPH41_RS05770;Dbxref=Genbank:WP_038271816.1;Name=WP_038271816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115327.1;locus_tag=LPH41_RS05770;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_038271816.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1293792 1294691 . - . ID=gene-LPH41_RS05775;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LPH41_RS05775;old_locus_tag=LPH41_05775 NZ_CP087680.1 Protein Homology CDS 1293792 1294691 . - 0 ID=cds-WP_038271818.1;Parent=gene-LPH41_RS05775;Dbxref=Genbank:WP_038271818.1;Name=WP_038271818.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851801.1;locus_tag=LPH41_RS05775;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_038271818.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1294688 1297264 . - . ID=gene-LPH41_RS05780;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=pseudogene;locus_tag=LPH41_RS05780;old_locus_tag=LPH41_05780;pseudo=true NZ_CP087680.1 Protein Homology CDS 1294688 1297264 . - 0 ID=cds-LPH41_RS05780;Parent=gene-LPH41_RS05780;Note=frameshifted%3B internal stop;Ontology_term=GO:0018177,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=protein uridylylation|0018177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810763.1;locus_tag=LPH41_RS05780;product=[protein-PII] uridylyltransferase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1297304 1298080 . - . ID=gene-LPH41_RS05785;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LPH41_RS05785;old_locus_tag=LPH41_05785 NZ_CP087680.1 Protein Homology CDS 1297304 1298080 . - 0 ID=cds-WP_038271820.1;Parent=gene-LPH41_RS05785;Dbxref=Genbank:WP_038271820.1;Name=WP_038271820.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085539.1;locus_tag=LPH41_RS05785;product=type I methionyl aminopeptidase;protein_id=WP_038271820.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1298650 1299060 . - . ID=gene-LPH41_RS05790;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LPH41_RS05790;old_locus_tag=LPH41_05790 NZ_CP087680.1 Protein Homology CDS 1298650 1299060 . - 0 ID=cds-WP_038271821.1;Parent=gene-LPH41_RS05790;Dbxref=Genbank:WP_038271821.1;Name=WP_038271821.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892656.1;locus_tag=LPH41_RS05790;product=50S ribosomal protein L19;protein_id=WP_038271821.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1299236 1300009 . - . ID=gene-LPH41_RS05795;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LPH41_RS05795;old_locus_tag=LPH41_05795 NZ_CP087680.1 Protein Homology CDS 1299236 1300009 . - 0 ID=cds-WP_038271822.1;Parent=gene-LPH41_RS05795;Dbxref=Genbank:WP_038271822.1;Name=WP_038271822.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892655.1;locus_tag=LPH41_RS05795;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_038271822.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1300121 1300633 . - . ID=gene-LPH41_RS05800;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LPH41_RS05800;old_locus_tag=LPH41_05800 NZ_CP087680.1 Protein Homology CDS 1300121 1300633 . - 0 ID=cds-WP_038271823.1;Parent=gene-LPH41_RS05800;Dbxref=Genbank:WP_038271823.1;Name=WP_038271823.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085542.1;locus_tag=LPH41_RS05800;product=ribosome maturation factor RimM;protein_id=WP_038271823.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1300678 1300938 . - . ID=gene-LPH41_RS05805;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LPH41_RS05805;old_locus_tag=LPH41_05805 NZ_CP087680.1 Protein Homology CDS 1300678 1300938 . - 0 ID=cds-WP_038271824.1;Parent=gene-LPH41_RS05805;Dbxref=Genbank:WP_038271824.1;Name=WP_038271824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036396.1;locus_tag=LPH41_RS05805;product=30S ribosomal protein S16;protein_id=WP_038271824.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1302233 1302493 . - . ID=gene-LPH41_RS05810;Name=LPH41_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05810;old_locus_tag=LPH41_05810 NZ_CP087680.1 GeneMarkS-2+ CDS 1302233 1302493 . - 0 ID=cds-WP_152536642.1;Parent=gene-LPH41_RS05810;Dbxref=Genbank:WP_152536642.1;Name=WP_152536642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05810;product=hypothetical protein;protein_id=WP_152536642.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1303803 1305185 . - . ID=gene-LPH41_RS05815;Name=LPH41_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05815;old_locus_tag=LPH41_05815 NZ_CP087680.1 Protein Homology CDS 1303803 1305185 . - 0 ID=cds-WP_038271826.1;Parent=gene-LPH41_RS05815;Dbxref=Genbank:WP_038271826.1;Name=WP_038271826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085544.1;locus_tag=LPH41_RS05815;product=alpha-L-fucosidase;protein_id=WP_038271826.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1306568 1307878 . - . ID=gene-LPH41_RS05820;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LPH41_RS05820;old_locus_tag=LPH41_05820 NZ_CP087680.1 Protein Homology CDS 1306568 1307878 . - 0 ID=cds-WP_038271827.1;Parent=gene-LPH41_RS05820;Dbxref=Genbank:WP_038271827.1;Name=WP_038271827.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097494.1;locus_tag=LPH41_RS05820;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_038271827.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1307959 1308879 . + . ID=gene-LPH41_RS05825;Name=LPH41_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05825;old_locus_tag=LPH41_05825 NZ_CP087680.1 Protein Homology CDS 1307959 1308879 . + 0 ID=cds-WP_038271828.1;Parent=gene-LPH41_RS05825;Dbxref=Genbank:WP_038271828.1;Name=WP_038271828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851797.1;locus_tag=LPH41_RS05825;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=WP_038271828.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1309077 1310423 . - . ID=gene-LPH41_RS05830;Name=LPH41_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05830;old_locus_tag=LPH41_05830 NZ_CP087680.1 Protein Homology CDS 1309077 1310423 . - 0 ID=cds-WP_038271829.1;Parent=gene-LPH41_RS05830;Dbxref=Genbank:WP_038271829.1;Name=WP_038271829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851796.1;locus_tag=LPH41_RS05830;product=O-antigen ligase;protein_id=WP_038271829.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1310404 1311516 . - . ID=gene-LPH41_RS05835;Name=LPH41_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05835;old_locus_tag=LPH41_05835 NZ_CP087680.1 Protein Homology CDS 1310404 1311516 . - 0 ID=cds-WP_038271830.1;Parent=gene-LPH41_RS05835;Dbxref=Genbank:WP_038271830.1;Name=WP_038271830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851795.1;locus_tag=LPH41_RS05835;product=glycosyltransferase;protein_id=WP_038271830.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1311532 1311729 . - . ID=gene-LPH41_RS05840;Name=LPH41_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05840;old_locus_tag=LPH41_05840 NZ_CP087680.1 Protein Homology CDS 1311532 1311729 . - 0 ID=cds-WP_038271831.1;Parent=gene-LPH41_RS05840;Dbxref=Genbank:WP_038271831.1;Name=WP_038271831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483377.1;locus_tag=LPH41_RS05840;product=zinc-finger domain-containing protein;protein_id=WP_038271831.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1312030 1312179 . + . ID=gene-LPH41_RS05845;Name=LPH41_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05845;old_locus_tag=LPH41_05845 NZ_CP087680.1 GeneMarkS-2+ CDS 1312030 1312179 . + 0 ID=cds-WP_160165198.1;Parent=gene-LPH41_RS05845;Dbxref=Genbank:WP_160165198.1;Name=WP_160165198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05845;product=hypothetical protein;protein_id=WP_160165198.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1312296 1312466 . - . ID=gene-LPH41_RS05850;Name=LPH41_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05850;old_locus_tag=LPH41_05850 NZ_CP087680.1 GeneMarkS-2+ CDS 1312296 1312466 . - 0 ID=cds-WP_160165199.1;Parent=gene-LPH41_RS05850;Dbxref=Genbank:WP_160165199.1;Name=WP_160165199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05850;product=hypothetical protein;protein_id=WP_160165199.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1313122 1314960 . + . ID=gene-LPH41_RS05855;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LPH41_RS05855;old_locus_tag=LPH41_05855 NZ_CP087680.1 Protein Homology CDS 1313122 1314960 . + 0 ID=cds-WP_038271833.1;Parent=gene-LPH41_RS05855;Dbxref=Genbank:WP_038271833.1;Name=WP_038271833.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437115.1;locus_tag=LPH41_RS05855;product=dihydroxy-acid dehydratase;protein_id=WP_038271833.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1315038 1315232 . - . ID=gene-LPH41_RS05860;Name=LPH41_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05860;old_locus_tag=LPH41_05860 NZ_CP087680.1 GeneMarkS-2+ CDS 1315038 1315232 . - 0 ID=cds-WP_038271834.1;Parent=gene-LPH41_RS05860;Dbxref=Genbank:WP_038271834.1;Name=WP_038271834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05860;product=hypothetical protein;protein_id=WP_038271834.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1315777 1316166 . - . ID=gene-LPH41_RS05865;Name=LPH41_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05865;old_locus_tag=LPH41_05865 NZ_CP087680.1 Protein Homology CDS 1315777 1316166 . - 0 ID=cds-WP_038271835.1;Parent=gene-LPH41_RS05865;Dbxref=Genbank:WP_038271835.1;Name=WP_038271835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085551.1;locus_tag=LPH41_RS05865;product=MTH938/NDUFAF3 family protein;protein_id=WP_038271835.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1316185 1316490 . - . ID=gene-LPH41_RS05870;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LPH41_RS05870;old_locus_tag=LPH41_05870 NZ_CP087680.1 Protein Homology CDS 1316185 1316490 . - 0 ID=cds-WP_038271836.1;Parent=gene-LPH41_RS05870;Dbxref=Genbank:WP_038271836.1;Name=WP_038271836.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300317.1;locus_tag=LPH41_RS05870;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_038271836.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1316559 1317200 . + . ID=gene-LPH41_RS05875;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=LPH41_RS05875;old_locus_tag=LPH41_05875 NZ_CP087680.1 Protein Homology CDS 1316559 1317200 . + 0 ID=cds-WP_038271837.1;Parent=gene-LPH41_RS05875;Dbxref=Genbank:WP_038271837.1;Name=WP_038271837.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851792.1;locus_tag=LPH41_RS05875;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_038271837.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1317253 1319184 . + . ID=gene-LPH41_RS05880;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LPH41_RS05880;old_locus_tag=LPH41_05880 NZ_CP087680.1 Protein Homology CDS 1317253 1319184 . + 0 ID=cds-WP_230439331.1;Parent=gene-LPH41_RS05880;Dbxref=Genbank:WP_230439331.1;Name=WP_230439331.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019399873.1;locus_tag=LPH41_RS05880;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_230439331.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1319470 1320357 . + . ID=gene-LPH41_RS05885;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LPH41_RS05885;old_locus_tag=LPH41_05885 NZ_CP087680.1 Protein Homology CDS 1319470 1320357 . + 0 ID=cds-WP_038271841.1;Parent=gene-LPH41_RS05885;Dbxref=Genbank:WP_038271841.1;Name=WP_038271841.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268106.1;locus_tag=LPH41_RS05885;product=dihydropteroate synthase;protein_id=WP_038271841.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1320357 1321340 . + . ID=gene-LPH41_RS05890;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LPH41_RS05890;old_locus_tag=LPH41_05890 NZ_CP087680.1 Protein Homology CDS 1320357 1321340 . + 0 ID=cds-WP_038271843.1;Parent=gene-LPH41_RS05890;Dbxref=Genbank:WP_038271843.1;Name=WP_038271843.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507485.1;locus_tag=LPH41_RS05890;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_038271843.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1321414 1321692 . + . ID=gene-LPH41_RS05895;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LPH41_RS05895;old_locus_tag=LPH41_05895 NZ_CP087680.1 Protein Homology CDS 1321414 1321692 . + 0 ID=cds-WP_038271845.1;Parent=gene-LPH41_RS05895;Dbxref=Genbank:WP_038271845.1;Name=WP_038271845.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085558.1;locus_tag=LPH41_RS05895;product=RNA chaperone Hfq;protein_id=WP_038271845.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1321707 1323080 . + . ID=gene-LPH41_RS05900;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LPH41_RS05900;old_locus_tag=LPH41_05900 NZ_CP087680.1 Protein Homology CDS 1321707 1323080 . + 0 ID=cds-WP_038271847.1;Parent=gene-LPH41_RS05900;Dbxref=Genbank:WP_038271847.1;Name=WP_038271847.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853003.1;locus_tag=LPH41_RS05900;product=GTPase HflX;protein_id=WP_038271847.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1323136 1324443 . + . ID=gene-LPH41_RS05905;Name=LPH41_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05905;old_locus_tag=LPH41_05905 NZ_CP087680.1 Protein Homology CDS 1323136 1324443 . + 0 ID=cds-WP_038271849.1;Parent=gene-LPH41_RS05905;Dbxref=Genbank:WP_038271849.1;Name=WP_038271849.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087678.1;locus_tag=LPH41_RS05905;product=MFS family transporter;protein_id=WP_038271849.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1324527 1325015 . + . ID=gene-LPH41_RS05910;Name=LPH41_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05910;old_locus_tag=LPH41_05910 NZ_CP087680.1 Protein Homology CDS 1324527 1325015 . + 0 ID=cds-WP_038271852.1;Parent=gene-LPH41_RS05910;Dbxref=Genbank:WP_038271852.1;Name=WP_038271852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087680.1;locus_tag=LPH41_RS05910;product=CinA family protein;protein_id=WP_038271852.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1327764 1328318 . + . ID=gene-LPH41_RS05915;Name=LPH41_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05915;old_locus_tag=LPH41_05915 NZ_CP087680.1 Protein Homology CDS 1327764 1328318 . + 0 ID=cds-WP_038271866.1;Parent=gene-LPH41_RS05915;Dbxref=Genbank:WP_038271866.1;Name=WP_038271866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085562.1;locus_tag=LPH41_RS05915;product=fimbrial protein;protein_id=WP_038271866.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1328363 1329187 . + . ID=gene-LPH41_RS05920;Name=LPH41_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05920;old_locus_tag=LPH41_05920 NZ_CP087680.1 Protein Homology CDS 1328363 1329187 . + 0 ID=cds-WP_230428495.1;Parent=gene-LPH41_RS05920;Dbxref=Genbank:WP_230428495.1;Name=WP_230428495.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085563.1;locus_tag=LPH41_RS05920;product=fimbria/pilus periplasmic chaperone;protein_id=WP_230428495.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1329215 1331920 . + . ID=gene-LPH41_RS05925;Name=LPH41_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05925;old_locus_tag=LPH41_05925 NZ_CP087680.1 Protein Homology CDS 1329215 1331920 . + 0 ID=cds-WP_038271854.1;Parent=gene-LPH41_RS05925;Dbxref=Genbank:WP_038271854.1;Name=WP_038271854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085564.1;locus_tag=LPH41_RS05925;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_038271854.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1331974 1332981 . + . ID=gene-LPH41_RS05930;Name=LPH41_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05930;old_locus_tag=LPH41_05930 NZ_CP087680.1 Protein Homology CDS 1331974 1332981 . + 0 ID=cds-WP_230428139.1;Parent=gene-LPH41_RS05930;Dbxref=Genbank:WP_230428139.1;Name=WP_230428139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337552.1;locus_tag=LPH41_RS05930;product=fimbrial protein;protein_id=WP_230428139.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1334847 1335839 . + . ID=gene-LPH41_RS05935;Name=LPH41_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05935;old_locus_tag=LPH41_05935 NZ_CP087680.1 Protein Homology CDS 1334847 1335839 . + 0 ID=cds-WP_230428138.1;Parent=gene-LPH41_RS05935;Dbxref=Genbank:WP_230428138.1;Name=WP_230428138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337552.1;locus_tag=LPH41_RS05935;product=fimbrial protein;protein_id=WP_230428138.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1336236 1337033 . - . ID=gene-LPH41_RS05940;Name=LPH41_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05940;old_locus_tag=LPH41_05940 NZ_CP087680.1 Protein Homology CDS 1336236 1337033 . - 0 ID=cds-WP_038271859.1;Parent=gene-LPH41_RS05940;Dbxref=Genbank:WP_038271859.1;Name=WP_038271859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852873.1;locus_tag=LPH41_RS05940;product=aminotransferase class IV family protein;protein_id=WP_038271859.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1338093 1339460 . - . ID=gene-LPH41_RS05945;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LPH41_RS05945;old_locus_tag=LPH41_05945 NZ_CP087680.1 Protein Homology CDS 1338093 1339460 . - 0 ID=cds-WP_038271862.1;Parent=gene-LPH41_RS05945;Dbxref=Genbank:WP_038271862.1;Name=WP_038271862.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407905.1;locus_tag=LPH41_RS05945;product=signal recognition particle protein;protein_id=WP_038271862.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1339612 1340376 . + . ID=gene-LPH41_RS05950;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LPH41_RS05950;old_locus_tag=LPH41_05950 NZ_CP087680.1 Protein Homology CDS 1339612 1340376 . + 0 ID=cds-WP_038273056.1-2;Parent=gene-LPH41_RS05950;Dbxref=Genbank:WP_038273056.1;Name=WP_038273056.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085053.1;locus_tag=LPH41_RS05950;product=cytochrome c biogenesis protein CcsA;protein_id=WP_038273056.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1340479 1341294 . - . ID=gene-LPH41_RS05955;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LPH41_RS05955;old_locus_tag=LPH41_05955 NZ_CP087680.1 Protein Homology CDS 1340479 1341294 . - 0 ID=cds-WP_038273054.1-2;Parent=gene-LPH41_RS05955;Dbxref=Genbank:WP_038273054.1;Name=WP_038273054.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085054.1;locus_tag=LPH41_RS05955;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_038273054.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1341445 1341558 . - . ID=gene-LPH41_RS05960;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LPH41_RS05960;old_locus_tag=LPH41_05960 NZ_CP087680.1 cmsearch rRNA 1341445 1341558 . - . ID=rna-LPH41_RS05960;Parent=gene-LPH41_RS05960;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05960;product=5S ribosomal RNA NZ_CP087680.1 cmsearch exon 1341445 1341558 . - . ID=exon-LPH41_RS05960-1;Parent=rna-LPH41_RS05960;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05960;product=5S ribosomal RNA NZ_CP087680.1 RefSeq gene 1341689 1344567 . - . ID=gene-LPH41_RS05965;Name=LPH41_RS05965;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH41_RS05965;old_locus_tag=LPH41_05965 NZ_CP087680.1 cmsearch rRNA 1341689 1344567 . - . ID=rna-LPH41_RS05965;Parent=gene-LPH41_RS05965;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05965;product=23S ribosomal RNA NZ_CP087680.1 cmsearch exon 1341689 1344567 . - . ID=exon-LPH41_RS05965-1;Parent=rna-LPH41_RS05965;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05965;product=23S ribosomal RNA NZ_CP087680.1 RefSeq gene 1344786 1344862 . - . ID=gene-LPH41_RS05970;Name=LPH41_RS05970;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05970;old_locus_tag=LPH41_05970 NZ_CP087680.1 tRNAscan-SE tRNA 1344786 1344862 . - . ID=rna-LPH41_RS05970;Parent=gene-LPH41_RS05970;anticodon=(pos:complement(1344826..1344828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05970;product=tRNA-Ile NZ_CP087680.1 tRNAscan-SE exon 1344786 1344862 . - . ID=exon-LPH41_RS05970-1;Parent=rna-LPH41_RS05970;anticodon=(pos:complement(1344826..1344828));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05970;product=tRNA-Ile NZ_CP087680.1 RefSeq gene 1344874 1344949 . - . ID=gene-LPH41_RS05975;Name=LPH41_RS05975;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS05975;old_locus_tag=LPH41_05975 NZ_CP087680.1 tRNAscan-SE tRNA 1344874 1344949 . - . ID=rna-LPH41_RS05975;Parent=gene-LPH41_RS05975;anticodon=(pos:complement(1344914..1344916));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05975;product=tRNA-Ala NZ_CP087680.1 tRNAscan-SE exon 1344874 1344949 . - . ID=exon-LPH41_RS05975-1;Parent=rna-LPH41_RS05975;anticodon=(pos:complement(1344914..1344916));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS05975;product=tRNA-Ala NZ_CP087680.1 RefSeq gene 1345044 1346588 . - . ID=gene-LPH41_RS05980;Name=LPH41_RS05980;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH41_RS05980;old_locus_tag=LPH41_05980 NZ_CP087680.1 cmsearch rRNA 1345044 1346588 . - . ID=rna-LPH41_RS05980;Parent=gene-LPH41_RS05980;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05980;product=16S ribosomal RNA NZ_CP087680.1 cmsearch exon 1345044 1346588 . - . ID=exon-LPH41_RS05980-1;Parent=rna-LPH41_RS05980;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS05980;product=16S ribosomal RNA NZ_CP087680.1 RefSeq gene 1349020 1349421 . - . ID=gene-LPH41_RS05985;Name=LPH41_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05985;old_locus_tag=LPH41_05985 NZ_CP087680.1 GeneMarkS-2+ CDS 1349020 1349421 . - 0 ID=cds-WP_152536653.1;Parent=gene-LPH41_RS05985;Dbxref=Genbank:WP_152536653.1;Name=WP_152536653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05985;product=hypothetical protein;protein_id=WP_152536653.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1351103 1352638 . - . ID=gene-LPH41_RS05990;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LPH41_RS05990;old_locus_tag=LPH41_05990 NZ_CP087680.1 Protein Homology CDS 1351103 1352638 . - 0 ID=cds-WP_081755472.1;Parent=gene-LPH41_RS05990;Dbxref=Genbank:WP_081755472.1;Name=WP_081755472.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852252.1;locus_tag=LPH41_RS05990;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_081755472.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1353877 1354050 . - . ID=gene-LPH41_RS05995;Name=LPH41_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS05995;old_locus_tag=LPH41_05995 NZ_CP087680.1 GeneMarkS-2+ CDS 1353877 1354050 . - 0 ID=cds-WP_160165216.1;Parent=gene-LPH41_RS05995;Dbxref=Genbank:WP_160165216.1;Name=WP_160165216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS05995;product=hypothetical protein;protein_id=WP_160165216.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1354941 1355017 . - . ID=gene-LPH41_RS06000;Name=LPH41_RS06000;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS06000;old_locus_tag=LPH41_06000 NZ_CP087680.1 tRNAscan-SE tRNA 1354941 1355017 . - . ID=rna-LPH41_RS06000;Parent=gene-LPH41_RS06000;anticodon=(pos:complement(1354981..1354983));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06000;product=tRNA-Arg NZ_CP087680.1 tRNAscan-SE exon 1354941 1355017 . - . ID=exon-LPH41_RS06000-1;Parent=rna-LPH41_RS06000;anticodon=(pos:complement(1354981..1354983));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06000;product=tRNA-Arg NZ_CP087680.1 RefSeq gene 1355124 1356023 . + . ID=gene-LPH41_RS06005;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LPH41_RS06005;old_locus_tag=LPH41_06005 NZ_CP087680.1 Protein Homology CDS 1355124 1356023 . + 0 ID=cds-WP_038272309.1;Parent=gene-LPH41_RS06005;Dbxref=Genbank:WP_038272309.1;Name=WP_038272309.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085055.1;locus_tag=LPH41_RS06005;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_038272309.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1357042 1358079 . - . ID=gene-LPH41_RS06010;Name=LPH41_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06010;old_locus_tag=LPH41_06010 NZ_CP087680.1 Protein Homology CDS 1357042 1358079 . - 0 ID=cds-WP_038272307.1;Parent=gene-LPH41_RS06010;Dbxref=Genbank:WP_038272307.1;Name=WP_038272307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085056.1;locus_tag=LPH41_RS06010;product=patatin-like phospholipase family protein;protein_id=WP_038272307.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1358466 1359491 . - . ID=gene-LPH41_RS06015;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LPH41_RS06015;old_locus_tag=LPH41_06015 NZ_CP087680.1 Protein Homology CDS 1358466 1359491 . - 0 ID=cds-WP_038272321.1;Parent=gene-LPH41_RS06015;Dbxref=Genbank:WP_038272321.1;Name=WP_038272321.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892613.1;locus_tag=LPH41_RS06015;product=biotin synthase BioB;protein_id=WP_038272321.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1359541 1360257 . + . ID=gene-LPH41_RS06020;Name=LPH41_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06020;old_locus_tag=LPH41_06020 NZ_CP087680.1 Protein Homology CDS 1359541 1360257 . + 0 ID=cds-WP_038272305.1;Parent=gene-LPH41_RS06020;Dbxref=Genbank:WP_038272305.1;Name=WP_038272305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852835.1;locus_tag=LPH41_RS06020;product=ComF family protein;protein_id=WP_038272305.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1360626 1360787 . + . ID=gene-LPH41_RS06025;Name=LPH41_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06025;old_locus_tag=LPH41_06025 NZ_CP087680.1 GeneMarkS-2+ CDS 1360626 1360787 . + 0 ID=cds-WP_160165215.1;Parent=gene-LPH41_RS06025;Dbxref=Genbank:WP_160165215.1;Name=WP_160165215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06025;product=hypothetical protein;protein_id=WP_160165215.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1362476 1363519 . + . ID=gene-LPH41_RS06030;Name=LPH41_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06030;old_locus_tag=LPH41_06030 NZ_CP087680.1 Protein Homology CDS 1362476 1363519 . + 0 ID=cds-WP_038272299.1;Parent=gene-LPH41_RS06030;Dbxref=Genbank:WP_038272299.1;Name=WP_038272299.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087145.1;locus_tag=LPH41_RS06030;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_038272299.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1364197 1364370 . + . ID=gene-LPH41_RS06035;Name=LPH41_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06035;old_locus_tag=LPH41_06035 NZ_CP087680.1 GeneMarkS-2+ CDS 1364197 1364370 . + 0 ID=cds-WP_216651941.1;Parent=gene-LPH41_RS06035;Dbxref=Genbank:WP_216651941.1;Name=WP_216651941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06035;product=hypothetical protein;protein_id=WP_216651941.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1364993 1365775 . - . ID=gene-LPH41_RS06040;Name=LPH41_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06040;old_locus_tag=LPH41_06040 NZ_CP087680.1 Protein Homology CDS 1364993 1365775 . - 0 ID=cds-WP_038272298.1;Parent=gene-LPH41_RS06040;Dbxref=Genbank:WP_038272298.1;Name=WP_038272298.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085059.1;locus_tag=LPH41_RS06040;product=pyridoxine 5'-phosphate synthase;protein_id=WP_038272298.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1365772 1366050 . - . ID=gene-LPH41_RS06045;Name=LPH41_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06045;old_locus_tag=LPH41_06045 NZ_CP087680.1 Protein Homology CDS 1365772 1366050 . - 0 ID=cds-WP_038272319.1;Parent=gene-LPH41_RS06045;Dbxref=Genbank:WP_038272319.1;Name=WP_038272319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852838.1;locus_tag=LPH41_RS06045;product=DUF2244 domain-containing protein;protein_id=WP_038272319.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1368363 1369556 . - . ID=gene-LPH41_RS06050;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LPH41_RS06050;old_locus_tag=LPH41_06050 NZ_CP087680.1 Protein Homology CDS 1368363 1369556 . - 0 ID=cds-WP_038272293.1;Parent=gene-LPH41_RS06050;Dbxref=Genbank:WP_038272293.1;Name=WP_038272293.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851920.1;locus_tag=LPH41_RS06050;product=NO-inducible flavohemoprotein;protein_id=WP_038272293.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1370426 1372612 . + . ID=gene-LPH41_RS06055;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=LPH41_RS06055;old_locus_tag=LPH41_06055 NZ_CP087680.1 Protein Homology CDS 1370426 1372612 . + 0 ID=cds-WP_038272290.1;Parent=gene-LPH41_RS06055;Dbxref=Genbank:WP_038272290.1;Name=WP_038272290.1;Ontology_term=GO:0006281,GO:0003678;gbkey=CDS;gene=uvrD;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809467.1;locus_tag=LPH41_RS06055;product=DNA helicase II;protein_id=WP_038272290.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1373143 1374510 . - . ID=gene-LPH41_RS06060;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LPH41_RS06060;old_locus_tag=LPH41_06060 NZ_CP087680.1 Protein Homology CDS 1373143 1374510 . - 0 ID=cds-WP_038272288.1;Parent=gene-LPH41_RS06060;Dbxref=Genbank:WP_038272288.1;Name=WP_038272288.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660825.1;locus_tag=LPH41_RS06060;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_038272288.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1374568 1375053 . - . ID=gene-LPH41_RS06065;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LPH41_RS06065;old_locus_tag=LPH41_06065 NZ_CP087680.1 Protein Homology CDS 1374568 1375053 . - 0 ID=cds-WP_038272286.1;Parent=gene-LPH41_RS06065;Dbxref=Genbank:WP_038272286.1;Name=WP_038272286.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087117.1;locus_tag=LPH41_RS06065;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_038272286.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1375104 1375550 . - . ID=gene-LPH41_RS06070;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LPH41_RS06070;old_locus_tag=LPH41_06070 NZ_CP087680.1 Protein Homology CDS 1375104 1375550 . - 0 ID=cds-WP_038272284.1;Parent=gene-LPH41_RS06070;Dbxref=Genbank:WP_038272284.1;Name=WP_038272284.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087115.1;locus_tag=LPH41_RS06070;product=type II 3-dehydroquinate dehydratase;protein_id=WP_038272284.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1376375 1379959 . - . ID=gene-LPH41_RS06075;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LPH41_RS06075;old_locus_tag=LPH41_06075 NZ_CP087680.1 Protein Homology CDS 1376375 1379959 . - 0 ID=cds-WP_038272281.1;Parent=gene-LPH41_RS06075;Dbxref=Genbank:WP_038272281.1;Name=WP_038272281.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802759.1;locus_tag=LPH41_RS06075;product=transcription-repair coupling factor;protein_id=WP_038272281.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1380026 1380565 . - . ID=gene-LPH41_RS06080;Name=LPH41_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06080;old_locus_tag=LPH41_06080 NZ_CP087680.1 Protein Homology CDS 1380026 1380565 . - 0 ID=cds-WP_038272316.1;Parent=gene-LPH41_RS06080;Dbxref=Genbank:WP_038272316.1;Name=WP_038272316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892593.1;locus_tag=LPH41_RS06080;product=GNAT family N-acetyltransferase;protein_id=WP_038272316.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1381307 1382188 . - . ID=gene-LPH41_RS06085;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=LPH41_RS06085;old_locus_tag=LPH41_06085 NZ_CP087680.1 Protein Homology CDS 1381307 1382188 . - 0 ID=cds-WP_038272279.1;Parent=gene-LPH41_RS06085;Dbxref=Genbank:WP_038272279.1;Name=WP_038272279.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851926.1;locus_tag=LPH41_RS06085;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_038272279.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1382800 1384059 . - . ID=gene-LPH41_RS06090;Name=LPH41_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06090;old_locus_tag=LPH41_06090 NZ_CP087680.1 Protein Homology CDS 1382800 1384059 . - 0 ID=cds-WP_038272277.1;Parent=gene-LPH41_RS06090;Dbxref=Genbank:WP_038272277.1;Name=WP_038272277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851927.1;locus_tag=LPH41_RS06090;product=putative Na+/H+ antiporter;protein_id=WP_038272277.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1384132 1384275 . - . ID=gene-LPH41_RS06095;Name=LPH41_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06095;old_locus_tag=LPH41_06095 NZ_CP087680.1 GeneMarkS-2+ CDS 1384132 1384275 . - 0 ID=cds-WP_160165214.1;Parent=gene-LPH41_RS06095;Dbxref=Genbank:WP_160165214.1;Name=WP_160165214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06095;product=hypothetical protein;protein_id=WP_160165214.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1384820 1385038 . - . ID=gene-LPH41_RS06100;Name=LPH41_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06100;old_locus_tag=LPH41_06100 NZ_CP087680.1 GeneMarkS-2+ CDS 1384820 1385038 . - 0 ID=cds-WP_152536650.1;Parent=gene-LPH41_RS06100;Dbxref=Genbank:WP_152536650.1;Name=WP_152536650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06100;product=hypothetical protein;protein_id=WP_152536650.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1385985 1386140 . + . ID=gene-LPH41_RS06105;Name=LPH41_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06105;old_locus_tag=LPH41_06105 NZ_CP087680.1 GeneMarkS-2+ CDS 1385985 1386140 . + 0 ID=cds-WP_160165212.1;Parent=gene-LPH41_RS06105;Dbxref=Genbank:WP_160165212.1;Name=WP_160165212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06105;product=hypothetical protein;protein_id=WP_160165212.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1386283 1386687 . + . ID=gene-LPH41_RS06110;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LPH41_RS06110;old_locus_tag=LPH41_06110 NZ_CP087680.1 Protein Homology CDS 1386283 1386687 . + 0 ID=cds-WP_038272276.1;Parent=gene-LPH41_RS06110;Dbxref=Genbank:WP_038272276.1;Name=WP_038272276.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085069.1;locus_tag=LPH41_RS06110;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_038272276.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1387242 1388444 . - . ID=gene-LPH41_RS06115;Name=LPH41_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06115;old_locus_tag=LPH41_06115 NZ_CP087680.1 Protein Homology CDS 1387242 1388444 . - 0 ID=cds-WP_038272274.1;Parent=gene-LPH41_RS06115;Dbxref=Genbank:WP_038272274.1;Name=WP_038272274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851929.1;locus_tag=LPH41_RS06115;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_038272274.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1389844 1390575 . + . ID=gene-LPH41_RS06120;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LPH41_RS06120;old_locus_tag=LPH41_06120 NZ_CP087680.1 Protein Homology CDS 1389844 1390575 . + 0 ID=cds-WP_038272273.1;Parent=gene-LPH41_RS06120;Dbxref=Genbank:WP_038272273.1;Name=WP_038272273.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155183.1;locus_tag=LPH41_RS06120;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_038272273.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1391020 1391418 . - . ID=gene-LPH41_RS06125;Name=LPH41_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06125;old_locus_tag=LPH41_06125 NZ_CP087680.1 Protein Homology CDS 1391020 1391418 . - 0 ID=cds-WP_230428264.1;Parent=gene-LPH41_RS06125;Dbxref=Genbank:WP_230428264.1;Name=WP_230428264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097478.1;locus_tag=LPH41_RS06125;product=type IV pilin protein;protein_id=WP_230428264.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1391445 1395128 . - . ID=gene-LPH41_RS06130;Name=LPH41_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06130;old_locus_tag=LPH41_06130 NZ_CP087680.1 Protein Homology CDS 1391445 1395128 . - 0 ID=cds-WP_230439332.1;Parent=gene-LPH41_RS06130;Dbxref=Genbank:WP_230439332.1;Name=WP_230439332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097477.1;locus_tag=LPH41_RS06130;product=pilus assembly protein;protein_id=WP_230439332.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1395154 1395741 . - . ID=gene-LPH41_RS06135;Name=LPH41_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06135;old_locus_tag=LPH41_06135 NZ_CP087680.1 Protein Homology CDS 1395154 1395741 . - 0 ID=cds-WP_038269588.1;Parent=gene-LPH41_RS06135;Dbxref=Genbank:WP_038269588.1;Name=WP_038269588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085074.1;locus_tag=LPH41_RS06135;product=pilus assembly protein;protein_id=WP_038269588.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1395738 1396694 . - . ID=gene-LPH41_RS06140;Name=LPH41_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06140;old_locus_tag=LPH41_06140 NZ_CP087680.1 Protein Homology CDS 1395738 1396694 . - 0 ID=cds-WP_038269591.1;Parent=gene-LPH41_RS06140;Dbxref=Genbank:WP_038269591.1;Name=WP_038269591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085075.1;locus_tag=LPH41_RS06140;product=PilW family protein;protein_id=WP_038269591.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1396691 1397167 . - . ID=gene-LPH41_RS06145;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LPH41_RS06145;old_locus_tag=LPH41_06145 NZ_CP087680.1 Protein Homology CDS 1396691 1397167 . - 0 ID=cds-WP_038269593.1;Parent=gene-LPH41_RS06145;Dbxref=Genbank:WP_038269593.1;Name=WP_038269593.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087852.1;locus_tag=LPH41_RS06145;product=type IV pilus modification protein PilV;protein_id=WP_038269593.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1397177 1397740 . - . ID=gene-LPH41_RS06150;Name=LPH41_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06150;old_locus_tag=LPH41_06150 NZ_CP087680.1 Protein Homology CDS 1397177 1397740 . - 0 ID=cds-WP_038269594.1;Parent=gene-LPH41_RS06150;Dbxref=Genbank:WP_038269594.1;Name=WP_038269594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087851.1;locus_tag=LPH41_RS06150;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_038269594.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1399735 1400838 . + . ID=gene-LPH41_RS06155;Name=LPH41_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06155;old_locus_tag=LPH41_06155 NZ_CP087680.1 Protein Homology CDS 1399735 1400838 . + 0 ID=cds-WP_038269598.1;Parent=gene-LPH41_RS06155;Dbxref=Genbank:WP_038269598.1;Name=WP_038269598.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892575.1;locus_tag=LPH41_RS06155;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_038269598.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1401695 1401771 . + . ID=gene-LPH41_RS06160;Name=LPH41_RS06160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS06160;old_locus_tag=LPH41_06160 NZ_CP087680.1 tRNAscan-SE tRNA 1401695 1401771 . + . ID=rna-LPH41_RS06160;Parent=gene-LPH41_RS06160;anticodon=(pos:1401729..1401731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06160;product=tRNA-Ile NZ_CP087680.1 tRNAscan-SE exon 1401695 1401771 . + . ID=exon-LPH41_RS06160-1;Parent=rna-LPH41_RS06160;anticodon=(pos:1401729..1401731);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06160;product=tRNA-Ile NZ_CP087680.1 RefSeq gene 1402695 1403237 . + . ID=gene-LPH41_RS06165;Name=LPH41_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06165;old_locus_tag=LPH41_06165 NZ_CP087680.1 GeneMarkS-2+ CDS 1402695 1403237 . + 0 ID=cds-WP_160165101.1;Parent=gene-LPH41_RS06165;Dbxref=Genbank:WP_160165101.1;Name=WP_160165101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06165;product=hypothetical protein;protein_id=WP_160165101.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1403502 1403792 . - . ID=gene-LPH41_RS06170;Name=LPH41_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06170;old_locus_tag=LPH41_06170 NZ_CP087680.1 GeneMarkS-2+ CDS 1403502 1403792 . - 0 ID=cds-WP_038269602.1;Parent=gene-LPH41_RS06170;Dbxref=Genbank:WP_038269602.1;Name=WP_038269602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06170;product=hypothetical protein;protein_id=WP_038269602.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1403886 1404053 . - . ID=gene-LPH41_RS06175;Name=LPH41_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06175;old_locus_tag=LPH41_06175 NZ_CP087680.1 GeneMarkS-2+ CDS 1403886 1404053 . - 0 ID=cds-WP_160165102.1;Parent=gene-LPH41_RS06175;Dbxref=Genbank:WP_160165102.1;Name=WP_160165102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06175;product=hypothetical protein;protein_id=WP_160165102.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1405254 1406168 . - . ID=gene-LPH41_RS06180;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LPH41_RS06180;old_locus_tag=LPH41_06180 NZ_CP087680.1 Protein Homology CDS 1405254 1406168 . - 0 ID=cds-WP_038269604.1;Parent=gene-LPH41_RS06180;Dbxref=Genbank:WP_038269604.1;Name=WP_038269604.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085079.1;locus_tag=LPH41_RS06180;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_038269604.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1406394 1406936 . - . ID=gene-LPH41_RS06185;Name=LPH41_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06185;old_locus_tag=LPH41_06185 NZ_CP087680.1 Protein Homology CDS 1406394 1406936 . - 0 ID=cds-WP_038269606.1;Parent=gene-LPH41_RS06185;Dbxref=Genbank:WP_038269606.1;Name=WP_038269606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851940.1;locus_tag=LPH41_RS06185;product=hypothetical protein;protein_id=WP_038269606.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1406992 1409364 . - . ID=gene-LPH41_RS06190;Name=LPH41_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06190;old_locus_tag=LPH41_06190 NZ_CP087680.1 Protein Homology CDS 1406992 1409364 . - 0 ID=cds-WP_038269608.1;Parent=gene-LPH41_RS06190;Dbxref=Genbank:WP_038269608.1;Name=WP_038269608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451941.1;locus_tag=LPH41_RS06190;product=S9 family peptidase;protein_id=WP_038269608.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1409708 1409938 . - . ID=gene-LPH41_RS06195;Name=LPH41_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06195;old_locus_tag=LPH41_06195 NZ_CP087680.1 GeneMarkS-2+ CDS 1409708 1409938 . - 0 ID=cds-WP_038269609.1;Parent=gene-LPH41_RS06195;Dbxref=Genbank:WP_038269609.1;Name=WP_038269609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06195;product=hypothetical protein;protein_id=WP_038269609.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1410337 1410756 . - . ID=gene-LPH41_RS06200;Name=LPH41_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06200;old_locus_tag=LPH41_06200 NZ_CP087680.1 Protein Homology CDS 1410337 1410756 . - 0 ID=cds-WP_038269611.1;Parent=gene-LPH41_RS06200;Dbxref=Genbank:WP_038269611.1;Name=WP_038269611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155972.1;locus_tag=LPH41_RS06200;product=biopolymer transporter ExbD;protein_id=WP_038269611.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1410760 1411182 . - . ID=gene-LPH41_RS06205;Name=LPH41_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06205;old_locus_tag=LPH41_06205 NZ_CP087680.1 Protein Homology CDS 1410760 1411182 . - 0 ID=cds-WP_038269613.1;Parent=gene-LPH41_RS06205;Dbxref=Genbank:WP_038269613.1;Name=WP_038269613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912447.1;locus_tag=LPH41_RS06205;product=biopolymer transporter ExbD;protein_id=WP_038269613.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1411236 1412000 . - . ID=gene-LPH41_RS06210;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=LPH41_RS06210;old_locus_tag=LPH41_06210 NZ_CP087680.1 Protein Homology CDS 1411236 1412000 . - 0 ID=cds-WP_038269615.1;Parent=gene-LPH41_RS06210;Dbxref=Genbank:WP_038269615.1;Name=WP_038269615.1;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805928.1;locus_tag=LPH41_RS06210;product=TonB-system energizer ExbB;protein_id=WP_038269615.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1412077 1412621 . - . ID=gene-LPH41_RS06215;Name=LPH41_RS06215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS06215;old_locus_tag=LPH41_06215;pseudo=true NZ_CP087680.1 Protein Homology CDS 1412077 1412621 . - 0 ID=cds-LPH41_RS06215;Parent=gene-LPH41_RS06215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014505935.1;locus_tag=LPH41_RS06215;product=energy transducer TonB;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1413296 1414486 . - . ID=gene-LPH41_RS06220;Name=LPH41_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06220;old_locus_tag=LPH41_06220 NZ_CP087680.1 Protein Homology CDS 1413296 1414486 . - 0 ID=cds-WP_038269617.1;Parent=gene-LPH41_RS06220;Dbxref=Genbank:WP_038269617.1;Name=WP_038269617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376399.1;locus_tag=LPH41_RS06220;product=tetratricopeptide repeat protein;protein_id=WP_038269617.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1414572 1415387 . - . ID=gene-LPH41_RS06225;Name=LPH41_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06225;old_locus_tag=LPH41_06225 NZ_CP087680.1 Protein Homology CDS 1414572 1415387 . - 0 ID=cds-WP_038269619.1;Parent=gene-LPH41_RS06225;Dbxref=Genbank:WP_038269619.1;Name=WP_038269619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087838.1;locus_tag=LPH41_RS06225;product=M48 family metallopeptidase;protein_id=WP_038269619.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1415450 1416280 . - . ID=gene-LPH41_RS06230;Name=LPH41_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06230;old_locus_tag=LPH41_06230 NZ_CP087680.1 Protein Homology CDS 1415450 1416280 . - 0 ID=cds-WP_081755380.1;Parent=gene-LPH41_RS06230;Dbxref=Genbank:WP_081755380.1;Name=WP_081755380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087837.1;locus_tag=LPH41_RS06230;product=CPBP family intramembrane metalloprotease;protein_id=WP_081755380.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1416329 1418773 . - . ID=gene-LPH41_RS06235;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LPH41_RS06235;old_locus_tag=LPH41_06235 NZ_CP087680.1 Protein Homology CDS 1416329 1418773 . - 0 ID=cds-WP_038269621.1;Parent=gene-LPH41_RS06235;Dbxref=Genbank:WP_038269621.1;Name=WP_038269621.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912438.1;locus_tag=LPH41_RS06235;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_038269621.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1419340 1420434 . - . ID=gene-LPH41_RS06240;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LPH41_RS06240;old_locus_tag=LPH41_06240 NZ_CP087680.1 Protein Homology CDS 1419340 1420434 . - 0 ID=cds-WP_038269623.1;Parent=gene-LPH41_RS06240;Dbxref=Genbank:WP_038269623.1;Name=WP_038269623.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087835.1;locus_tag=LPH41_RS06240;product=DNA replication/repair protein RecF;protein_id=WP_038269623.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1421118 1422227 . - . ID=gene-LPH41_RS06245;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LPH41_RS06245;old_locus_tag=LPH41_06245 NZ_CP087680.1 Protein Homology CDS 1421118 1422227 . - 0 ID=cds-WP_038269626.1;Parent=gene-LPH41_RS06245;Dbxref=Genbank:WP_038269626.1;Name=WP_038269626.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1;locus_tag=LPH41_RS06245;product=DNA polymerase III subunit beta;protein_id=WP_038269626.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1422499 1423812 . - . ID=gene-LPH41_RS06250;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LPH41_RS06250;old_locus_tag=LPH41_06250 NZ_CP087680.1 Protein Homology CDS 1422499 1423812 . - 0 ID=cds-WP_038269883.1;Parent=gene-LPH41_RS06250;Dbxref=Genbank:WP_038269883.1;Name=WP_038269883.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050021.1;locus_tag=LPH41_RS06250;product=chromosomal replication initiator protein DnaA;protein_id=WP_038269883.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1424035 1424175 . + . ID=gene-LPH41_RS06255;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LPH41_RS06255;old_locus_tag=LPH41_06255 NZ_CP087680.1 Protein Homology CDS 1424035 1424175 . + 0 ID=cds-WP_038269628.1;Parent=gene-LPH41_RS06255;Dbxref=Genbank:WP_038269628.1;Name=WP_038269628.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404565.1;locus_tag=LPH41_RS06255;product=50S ribosomal protein L34;protein_id=WP_038269628.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1424183 1424641 . + . ID=gene-LPH41_RS06260;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LPH41_RS06260;old_locus_tag=LPH41_06260 NZ_CP087680.1 Protein Homology CDS 1424183 1424641 . + 0 ID=cds-WP_081755381.1;Parent=gene-LPH41_RS06260;Dbxref=Genbank:WP_081755381.1;Name=WP_081755381.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:NF013022.2;locus_tag=LPH41_RS06260;product=ribonuclease P protein component;protein_id=WP_081755381.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1424685 1426376 . + . ID=gene-LPH41_RS06265;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LPH41_RS06265;old_locus_tag=LPH41_06265 NZ_CP087680.1 Protein Homology CDS 1424685 1426376 . + 0 ID=cds-WP_038269630.1;Parent=gene-LPH41_RS06265;Dbxref=Genbank:WP_038269630.1;Name=WP_038269630.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087831.1;locus_tag=LPH41_RS06265;product=membrane protein insertase YidC;protein_id=WP_038269630.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1426465 1429179 . + . ID=gene-LPH41_RS06270;Name=LPH41_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06270;old_locus_tag=LPH41_06270 NZ_CP087680.1 Protein Homology CDS 1426465 1429179 . + 0 ID=cds-WP_038269631.1;Parent=gene-LPH41_RS06270;Dbxref=Genbank:WP_038269631.1;Name=WP_038269631.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085096.1;locus_tag=LPH41_RS06270;product=polysaccharide deacetylase family protein;protein_id=WP_038269631.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1429176 1430528 . + . ID=gene-LPH41_RS06275;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LPH41_RS06275;old_locus_tag=LPH41_06275 NZ_CP087680.1 Protein Homology CDS 1429176 1430528 . + 0 ID=cds-WP_038269633.1;Parent=gene-LPH41_RS06275;Dbxref=Genbank:WP_038269633.1;Name=WP_038269633.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039299.1;locus_tag=LPH41_RS06275;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_038269633.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1430788 1431660 . - . ID=gene-LPH41_RS06280;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LPH41_RS06280;old_locus_tag=LPH41_06280 NZ_CP087680.1 Protein Homology CDS 1430788 1431660 . - 0 ID=cds-WP_038269635.1;Parent=gene-LPH41_RS06280;Dbxref=Genbank:WP_038269635.1;Name=WP_038269635.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812253.1;locus_tag=LPH41_RS06280;product=succinate--CoA ligase subunit alpha;protein_id=WP_038269635.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1431689 1432852 . - . ID=gene-LPH41_RS06285;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LPH41_RS06285;old_locus_tag=LPH41_06285 NZ_CP087680.1 Protein Homology CDS 1431689 1432852 . - 0 ID=cds-WP_038269637.1;Parent=gene-LPH41_RS06285;Dbxref=Genbank:WP_038269637.1;Name=WP_038269637.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894968.1;locus_tag=LPH41_RS06285;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_038269637.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1433108 1434718 . + . ID=gene-LPH41_RS06290;Name=LPH41_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06290;old_locus_tag=LPH41_06290 NZ_CP087680.1 Protein Homology CDS 1433108 1434718 . + 0 ID=cds-WP_038269639.1;Parent=gene-LPH41_RS06290;Dbxref=Genbank:WP_038269639.1;Name=WP_038269639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348336.1;locus_tag=LPH41_RS06290;product=ATP-binding protein;protein_id=WP_038269639.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1434887 1436299 . + . ID=gene-LPH41_RS06295;Name=LPH41_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06295;old_locus_tag=LPH41_06295 NZ_CP087680.1 Protein Homology CDS 1434887 1436299 . + 0 ID=cds-WP_038269641.1;Parent=gene-LPH41_RS06295;Dbxref=Genbank:WP_038269641.1;Name=WP_038269641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437607.1;locus_tag=LPH41_RS06295;product=sigma-54 dependent transcriptional regulator;protein_id=WP_038269641.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1436391 1438124 . - . ID=gene-LPH41_RS06300;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=LPH41_RS06300;old_locus_tag=LPH41_06300 NZ_CP087680.1 Protein Homology CDS 1436391 1438124 . - 0 ID=cds-WP_038269643.1;Parent=gene-LPH41_RS06300;Dbxref=Genbank:WP_038269643.1;Name=WP_038269643.1;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851241.1;locus_tag=LPH41_RS06300;product=type IV-A pilus assembly ATPase PilB;protein_id=WP_038269643.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1438240 1438542 . - . ID=gene-LPH41_RS06305;Name=LPH41_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06305;old_locus_tag=LPH41_06305 NZ_CP087680.1 GeneMarkS-2+ CDS 1438240 1438542 . - 0 ID=cds-WP_162814113.1;Parent=gene-LPH41_RS06305;Dbxref=Genbank:WP_162814113.1;Name=WP_162814113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06305;product=hypothetical protein;protein_id=WP_162814113.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1438987 1439463 . - . ID=gene-LPH41_RS06310;Name=LPH41_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06310;old_locus_tag=LPH41_06310 NZ_CP087680.1 Protein Homology CDS 1438987 1439463 . - 0 ID=cds-WP_038269647.1;Parent=gene-LPH41_RS06310;Dbxref=Genbank:WP_038269647.1;Name=WP_038269647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851240.1;locus_tag=LPH41_RS06310;product=pilin;protein_id=WP_038269647.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1439667 1440209 . - . ID=gene-LPH41_RS06315;Name=LPH41_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06315;old_locus_tag=LPH41_06315 NZ_CP087680.1 Protein Homology CDS 1439667 1440209 . - 0 ID=cds-WP_038269649.1;Parent=gene-LPH41_RS06315;Dbxref=Genbank:WP_038269649.1;Name=WP_038269649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH41_RS06315;product=pilin;protein_id=WP_038269649.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1440606 1440812 . + . ID=gene-LPH41_RS06320;Name=LPH41_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06320;old_locus_tag=LPH41_06320 NZ_CP087680.1 GeneMarkS-2+ CDS 1440606 1440812 . + 0 ID=cds-WP_152536555.1;Parent=gene-LPH41_RS06320;Dbxref=Genbank:WP_152536555.1;Name=WP_152536555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06320;product=hypothetical protein;protein_id=WP_152536555.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1442909 1443364 . - . ID=gene-LPH41_RS06325;Name=LPH41_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06325;old_locus_tag=LPH41_06325 NZ_CP087680.1 Protein Homology CDS 1442909 1443364 . - 0 ID=cds-WP_038269653.1;Parent=gene-LPH41_RS06325;Dbxref=Genbank:WP_038269653.1;Name=WP_038269653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084597.1;locus_tag=LPH41_RS06325;product=pilin;protein_id=WP_038269653.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1443805 1445007 . + . ID=gene-LPH41_RS06330;Name=LPH41_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06330;old_locus_tag=LPH41_06330 NZ_CP087680.1 Protein Homology CDS 1443805 1445007 . + 0 ID=cds-WP_114867231.1;Parent=gene-LPH41_RS06330;Dbxref=Genbank:WP_114867231.1;Name=WP_114867231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894959.1;locus_tag=LPH41_RS06330;product=type II secretion system F family protein;protein_id=WP_114867231.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1445014 1445877 . + . ID=gene-LPH41_RS06335;Name=LPH41_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06335;old_locus_tag=LPH41_06335 NZ_CP087680.1 Protein Homology CDS 1445014 1445877 . + 0 ID=cds-WP_038269655.1;Parent=gene-LPH41_RS06335;Dbxref=Genbank:WP_038269655.1;Name=WP_038269655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660173.1;locus_tag=LPH41_RS06335;product=A24 family peptidase;protein_id=WP_038269655.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1445889 1446524 . + . ID=gene-LPH41_RS06340;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LPH41_RS06340;old_locus_tag=LPH41_06340 NZ_CP087680.1 Protein Homology CDS 1445889 1446524 . + 0 ID=cds-WP_038269657.1;Parent=gene-LPH41_RS06340;Dbxref=Genbank:WP_038269657.1;Name=WP_038269657.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398553.1;locus_tag=LPH41_RS06340;product=dephospho-CoA kinase;protein_id=WP_038269657.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1446823 1448160 . - . ID=gene-LPH41_RS06345;Name=LPH41_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06345;old_locus_tag=LPH41_06345 NZ_CP087680.1 Protein Homology CDS 1446823 1448160 . - 0 ID=cds-WP_038269659.1;Parent=gene-LPH41_RS06345;Dbxref=Genbank:WP_038269659.1;Name=WP_038269659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084592.1;locus_tag=LPH41_RS06345;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_038269659.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1448153 1448830 . - . ID=gene-LPH41_RS06350;Name=LPH41_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06350;old_locus_tag=LPH41_06350 NZ_CP087680.1 Protein Homology CDS 1448153 1448830 . - 0 ID=cds-WP_038269661.1;Parent=gene-LPH41_RS06350;Dbxref=Genbank:WP_038269661.1;Name=WP_038269661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169438.1;locus_tag=LPH41_RS06350;product=response regulator transcription factor;protein_id=WP_038269661.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1449484 1450365 . - . ID=gene-LPH41_RS06355;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=LPH41_RS06355;old_locus_tag=LPH41_06355 NZ_CP087680.1 Protein Homology CDS 1449484 1450365 . - 0 ID=cds-WP_038269662.1;Parent=gene-LPH41_RS06355;Dbxref=Genbank:WP_038269662.1;Name=WP_038269662.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090391.1;locus_tag=LPH41_RS06355;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_038269662.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1452655 1452939 . - . ID=gene-LPH41_RS06360;Name=LPH41_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06360;old_locus_tag=LPH41_06360 NZ_CP087680.1 Protein Homology CDS 1452655 1452939 . - 0 ID=cds-WP_038269663.1;Parent=gene-LPH41_RS06360;Dbxref=Genbank:WP_038269663.1;Name=WP_038269663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183923.1;locus_tag=LPH41_RS06360;product=hypothetical protein;protein_id=WP_038269663.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1454107 1456014 . + . ID=gene-LPH41_RS06365;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LPH41_RS06365;old_locus_tag=LPH41_06365 NZ_CP087680.1 Protein Homology CDS 1454107 1456014 . + 0 ID=cds-WP_038269664.1;Parent=gene-LPH41_RS06365;Dbxref=Genbank:WP_038269664.1;Name=WP_038269664.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090399.1;locus_tag=LPH41_RS06365;product=threonine--tRNA ligase;protein_id=WP_038269664.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1456082 1456609 . + . ID=gene-LPH41_RS06370;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LPH41_RS06370;old_locus_tag=LPH41_06370 NZ_CP087680.1 Protein Homology CDS 1456082 1456609 . + 0 ID=cds-WP_081755382.1;Parent=gene-LPH41_RS06370;Dbxref=Genbank:WP_081755382.1;Name=WP_081755382.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=LPH41_RS06370;product=translation initiation factor IF-3;protein_id=WP_081755382.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1456851 1457048 . + . ID=gene-LPH41_RS06375;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LPH41_RS06375;old_locus_tag=LPH41_06375 NZ_CP087680.1 Protein Homology CDS 1456851 1457048 . + 0 ID=cds-WP_038269890.1;Parent=gene-LPH41_RS06375;Dbxref=Genbank:WP_038269890.1;Name=WP_038269890.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410436.1;locus_tag=LPH41_RS06375;product=50S ribosomal protein L35;protein_id=WP_038269890.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1457059 1457418 . + . ID=gene-LPH41_RS06380;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LPH41_RS06380;old_locus_tag=LPH41_06380 NZ_CP087680.1 Protein Homology CDS 1457059 1457418 . + 0 ID=cds-WP_038269666.1;Parent=gene-LPH41_RS06380;Dbxref=Genbank:WP_038269666.1;Name=WP_038269666.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037598.1;locus_tag=LPH41_RS06380;product=50S ribosomal protein L20;protein_id=WP_038269666.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1457690 1458685 . + . ID=gene-LPH41_RS06385;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LPH41_RS06385;old_locus_tag=LPH41_06385 NZ_CP087680.1 Protein Homology CDS 1457690 1458685 . + 0 ID=cds-WP_038269669.1;Parent=gene-LPH41_RS06385;Dbxref=Genbank:WP_038269669.1;Name=WP_038269669.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299936.1;locus_tag=LPH41_RS06385;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_038269669.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1458777 1461155 . + . ID=gene-LPH41_RS06390;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LPH41_RS06390;old_locus_tag=LPH41_06390 NZ_CP087680.1 Protein Homology CDS 1458777 1461155 . + 0 ID=cds-WP_038269671.1;Parent=gene-LPH41_RS06390;Dbxref=Genbank:WP_038269671.1;Name=WP_038269671.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903311.1;locus_tag=LPH41_RS06390;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_038269671.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1461179 1461478 . + . ID=gene-LPH41_RS06395;Name=LPH41_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06395;old_locus_tag=LPH41_06395 NZ_CP087680.1 Protein Homology CDS 1461179 1461478 . + 0 ID=cds-WP_038269673.1;Parent=gene-LPH41_RS06395;Dbxref=Genbank:WP_038269673.1;Name=WP_038269673.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811076.1;locus_tag=LPH41_RS06395;product=integration host factor subunit alpha;protein_id=WP_038269673.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1461459 1461815 . + . ID=gene-LPH41_RS06400;Name=LPH41_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06400;old_locus_tag=LPH41_06400 NZ_CP087680.1 Protein Homology CDS 1461459 1461815 . + 0 ID=cds-WP_038269675.1;Parent=gene-LPH41_RS06400;Dbxref=Genbank:WP_038269675.1;Name=WP_038269675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182707.1;locus_tag=LPH41_RS06400;product=MerR family transcriptional regulator;protein_id=WP_038269675.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1461938 1462014 . + . ID=gene-LPH41_RS06405;Name=LPH41_RS06405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS06405;old_locus_tag=LPH41_06405 NZ_CP087680.1 tRNAscan-SE tRNA 1461938 1462014 . + . ID=rna-LPH41_RS06405;Parent=gene-LPH41_RS06405;anticodon=(pos:1461972..1461974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06405;product=tRNA-Pro NZ_CP087680.1 tRNAscan-SE exon 1461938 1462014 . + . ID=exon-LPH41_RS06405-1;Parent=rna-LPH41_RS06405;anticodon=(pos:1461972..1461974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06405;product=tRNA-Pro NZ_CP087680.1 RefSeq gene 1462365 1462925 . + . ID=gene-LPH41_RS06410;Name=LPH41_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06410;old_locus_tag=LPH41_06410 NZ_CP087680.1 Protein Homology CDS 1462365 1462925 . + 0 ID=cds-WP_038269677.1;Parent=gene-LPH41_RS06410;Dbxref=Genbank:WP_038269677.1;Name=WP_038269677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572602.1;locus_tag=LPH41_RS06410;product=nucleoside deaminase;protein_id=WP_038269677.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1462935 1463877 . + . ID=gene-LPH41_RS06415;Name=LPH41_RS06415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS06415;old_locus_tag=LPH41_06415;pseudo=true NZ_CP087680.1 Protein Homology CDS 1462935 1463877 . + 0 ID=cds-LPH41_RS06415;Parent=gene-LPH41_RS06415;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159927.1;locus_tag=LPH41_RS06415;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1465322 1465726 . - . ID=gene-LPH41_RS06420;Name=LPH41_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06420;old_locus_tag=LPH41_06420 NZ_CP087680.1 Protein Homology CDS 1465322 1465726 . - 0 ID=cds-WP_038269681.1;Parent=gene-LPH41_RS06420;Dbxref=Genbank:WP_038269681.1;Name=WP_038269681.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084562.1;locus_tag=LPH41_RS06420;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_038269681.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1465969 1467060 . - . ID=gene-LPH41_RS06425;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=LPH41_RS06425;old_locus_tag=LPH41_06425 NZ_CP087680.1 Protein Homology CDS 1465969 1467060 . - 0 ID=cds-WP_038269683.1;Parent=gene-LPH41_RS06425;Dbxref=Genbank:WP_038269683.1;Name=WP_038269683.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893274.1;locus_tag=LPH41_RS06425;product=ribonuclease D;protein_id=WP_038269683.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1467183 1468985 . + . ID=gene-LPH41_RS06430;Name=LPH41_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06430;old_locus_tag=LPH41_06430 NZ_CP087680.1 Protein Homology CDS 1467183 1468985 . + 0 ID=cds-WP_038269895.1;Parent=gene-LPH41_RS06430;Dbxref=Genbank:WP_038269895.1;Name=WP_038269895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338098.1;locus_tag=LPH41_RS06430;product=formylglycine-generating enzyme family protein;protein_id=WP_038269895.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1469112 1470338 . + . ID=gene-LPH41_RS06435;Name=LPH41_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06435;old_locus_tag=LPH41_06435 NZ_CP087680.1 Protein Homology CDS 1469112 1470338 . + 0 ID=cds-WP_230439260.1;Parent=gene-LPH41_RS06435;Dbxref=Genbank:WP_230439260.1;Name=WP_230439260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017835.2;locus_tag=LPH41_RS06435;product=virulence factor;protein_id=WP_230439260.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1470399 1471733 . - . ID=gene-LPH41_RS06440;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LPH41_RS06440;old_locus_tag=LPH41_06440 NZ_CP087680.1 Protein Homology CDS 1470399 1471733 . - 0 ID=cds-WP_038269685.1;Parent=gene-LPH41_RS06440;Dbxref=Genbank:WP_038269685.1;Name=WP_038269685.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994364.1;locus_tag=LPH41_RS06440;product=exodeoxyribonuclease VII large subunit;protein_id=WP_038269685.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1472060 1473550 . + . ID=gene-LPH41_RS06445;Name=LPH41_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06445;old_locus_tag=LPH41_06445 NZ_CP087680.1 Protein Homology CDS 1472060 1473550 . + 0 ID=cds-WP_038269686.1;Parent=gene-LPH41_RS06445;Dbxref=Genbank:WP_038269686.1;Name=WP_038269686.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893280.1;locus_tag=LPH41_RS06445;product=NAD(P)H-hydrate dehydratase;protein_id=WP_038269686.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1473547 1474035 . + . ID=gene-LPH41_RS06450;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LPH41_RS06450;old_locus_tag=LPH41_06450 NZ_CP087680.1 Protein Homology CDS 1473547 1474035 . + 0 ID=cds-WP_038269688.1;Parent=gene-LPH41_RS06450;Dbxref=Genbank:WP_038269688.1;Name=WP_038269688.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852467.1;locus_tag=LPH41_RS06450;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_038269688.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1474094 1475713 . + . ID=gene-LPH41_RS06455;Name=LPH41_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06455;old_locus_tag=LPH41_06455 NZ_CP087680.1 Protein Homology CDS 1474094 1475713 . + 0 ID=cds-WP_038269690.1;Parent=gene-LPH41_RS06455;Dbxref=Genbank:WP_038269690.1;Name=WP_038269690.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037443.1;locus_tag=LPH41_RS06455;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_038269690.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1475852 1477723 . + . ID=gene-LPH41_RS06460;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LPH41_RS06460;old_locus_tag=LPH41_06460 NZ_CP087680.1 Protein Homology CDS 1475852 1477723 . + 0 ID=cds-WP_038269692.1;Parent=gene-LPH41_RS06460;Dbxref=Genbank:WP_038269692.1;Name=WP_038269692.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037442.1;locus_tag=LPH41_RS06460;product=DNA mismatch repair endonuclease MutL;protein_id=WP_038269692.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1477723 1478676 . + . ID=gene-LPH41_RS06465;Name=LPH41_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06465;old_locus_tag=LPH41_06465 NZ_CP087680.1 Protein Homology CDS 1477723 1478676 . + 0 ID=cds-WP_038269695.1;Parent=gene-LPH41_RS06465;Dbxref=Genbank:WP_038269695.1;Name=WP_038269695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852470.1;locus_tag=LPH41_RS06465;product=DUF1684 domain-containing protein;protein_id=WP_038269695.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1479189 1479764 . - . ID=gene-LPH41_RS06470;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LPH41_RS06470;old_locus_tag=LPH41_06470 NZ_CP087680.1 Protein Homology CDS 1479189 1479764 . - 0 ID=cds-WP_038269697.1;Parent=gene-LPH41_RS06470;Dbxref=Genbank:WP_038269697.1;Name=WP_038269697.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912996.1;locus_tag=LPH41_RS06470;product=dCTP deaminase;protein_id=WP_038269697.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1480068 1480988 . - . ID=gene-LPH41_RS06475;Name=LPH41_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06475;old_locus_tag=LPH41_06475 NZ_CP087680.1 Protein Homology CDS 1480068 1480988 . - 0 ID=cds-WP_114867230.1;Parent=gene-LPH41_RS06475;Dbxref=Genbank:WP_114867230.1;Name=WP_114867230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487396.1;locus_tag=LPH41_RS06475;product=pteridine-dependent deoxygenase;protein_id=WP_114867230.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1481195 1481433 . - . ID=gene-LPH41_RS06480;Name=LPH41_RS06480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS06480;old_locus_tag=LPH41_06480;partial=true;pseudo=true;start_range=.,1481195 NZ_CP087680.1 Protein Homology CDS 1481195 1481433 . - 0 ID=cds-LPH41_RS06480;Parent=gene-LPH41_RS06480;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003476649.1;locus_tag=LPH41_RS06480;partial=true;product=FAD-dependent monooxygenase;pseudo=true;start_range=.,1481195;transl_table=11 NZ_CP087680.1 RefSeq gene 1481610 1481879 . + . ID=gene-LPH41_RS06485;Name=LPH41_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06485;old_locus_tag=LPH41_06485 NZ_CP087680.1 Protein Homology CDS 1481610 1481879 . + 0 ID=cds-WP_038269698.1;Parent=gene-LPH41_RS06485;Dbxref=Genbank:WP_038269698.1;Name=WP_038269698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039083.1;locus_tag=LPH41_RS06485;product=phosphopantetheine-binding protein;protein_id=WP_038269698.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1481950 1482586 . + . ID=gene-LPH41_RS06490;Name=LPH41_RS06490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS06490;old_locus_tag=LPH41_06490;partial=true;pseudo=true;start_range=.,1481950 NZ_CP087680.1 Protein Homology CDS 1481950 1482586 . + 1 ID=cds-LPH41_RS06490;Parent=gene-LPH41_RS06490;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010342703.1;locus_tag=LPH41_RS06490;partial=true;product=ketosynthase;pseudo=true;start_range=.,1481950;transl_table=11 NZ_CP087680.1 RefSeq gene 1482796 1483083 . + . ID=gene-LPH41_RS06495;Name=LPH41_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06495;old_locus_tag=LPH41_06495 NZ_CP087680.1 Protein Homology CDS 1482796 1483083 . + 0 ID=cds-WP_038269700.1;Parent=gene-LPH41_RS06495;Dbxref=Genbank:WP_038269700.1;Name=WP_038269700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090455.1;locus_tag=LPH41_RS06495;product=beta-hydroxyacyl-ACP dehydratase;protein_id=WP_038269700.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1483080 1484060 . + . ID=gene-LPH41_RS06500;Name=LPH41_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06500;old_locus_tag=LPH41_06500 NZ_CP087680.1 Protein Homology CDS 1483080 1484060 . + 0 ID=cds-WP_038269702.1;Parent=gene-LPH41_RS06500;Dbxref=Genbank:WP_038269702.1;Name=WP_038269702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084511.1;locus_tag=LPH41_RS06500;product=acyltransferase;protein_id=WP_038269702.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1483987 1484631 . + . ID=gene-LPH41_RS06505;Name=LPH41_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06505;old_locus_tag=LPH41_06505 NZ_CP087680.1 Protein Homology CDS 1483987 1484631 . + 0 ID=cds-WP_081755386.1;Parent=gene-LPH41_RS06505;Dbxref=Genbank:WP_081755386.1;Name=WP_081755386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084509.1;locus_tag=LPH41_RS06505;product=fatty acyl CoA synthetase;protein_id=WP_081755386.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1484815 1487181 . + . ID=gene-LPH41_RS06510;Name=LPH41_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06510;old_locus_tag=LPH41_06510 NZ_CP087680.1 Protein Homology CDS 1484815 1487181 . + 0 ID=cds-WP_038269903.1;Parent=gene-LPH41_RS06510;Dbxref=Genbank:WP_038269903.1;Name=WP_038269903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084505.1;locus_tag=LPH41_RS06510;product=MMPL family transporter;protein_id=WP_038269903.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1487168 1487593 . + . ID=gene-LPH41_RS06515;Name=LPH41_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06515;old_locus_tag=LPH41_06515 NZ_CP087680.1 Protein Homology CDS 1487168 1487593 . + 0 ID=cds-WP_038269904.1;Parent=gene-LPH41_RS06515;Dbxref=Genbank:WP_038269904.1;Name=WP_038269904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571165.1;locus_tag=LPH41_RS06515;product=phosphotransferase;protein_id=WP_038269904.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1487771 1487844 . - . ID=gene-LPH41_RS06520;Name=LPH41_RS06520;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS06520;old_locus_tag=LPH41_06520 NZ_CP087680.1 tRNAscan-SE tRNA 1487771 1487844 . - . ID=rna-LPH41_RS06520;Parent=gene-LPH41_RS06520;anticodon=(pos:complement(1487810..1487812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06520;product=tRNA-Gly NZ_CP087680.1 tRNAscan-SE exon 1487771 1487844 . - . ID=exon-LPH41_RS06520-1;Parent=rna-LPH41_RS06520;anticodon=(pos:complement(1487810..1487812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06520;product=tRNA-Gly NZ_CP087680.1 RefSeq gene 1487948 1489720 . - . ID=gene-LPH41_RS06525;Name=LPH41_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06525;old_locus_tag=LPH41_06525 NZ_CP087680.1 Protein Homology CDS 1487948 1489720 . - 0 ID=cds-WP_171898096.1;Parent=gene-LPH41_RS06525;Dbxref=Genbank:WP_171898096.1;Name=WP_171898096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914545.1;locus_tag=LPH41_RS06525;product=autotransporter domain-containing protein;protein_id=WP_171898096.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1489917 1490117 . + . ID=gene-LPH41_RS06530;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LPH41_RS06530;old_locus_tag=LPH41_06530 NZ_CP087680.1 Protein Homology CDS 1489917 1490117 . + 0 ID=cds-WP_038269706.1;Parent=gene-LPH41_RS06530;Dbxref=Genbank:WP_038269706.1;Name=WP_038269706.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944633.1;locus_tag=LPH41_RS06530;product=sulfur carrier protein ThiS;protein_id=WP_038269706.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1490166 1490960 . + . ID=gene-LPH41_RS06535;Name=LPH41_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06535;old_locus_tag=LPH41_06535 NZ_CP087680.1 Protein Homology CDS 1490166 1490960 . + 0 ID=cds-WP_038269905.1;Parent=gene-LPH41_RS06535;Dbxref=Genbank:WP_038269905.1;Name=WP_038269905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337090.1;locus_tag=LPH41_RS06535;product=thiazole synthase;protein_id=WP_038269905.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1490957 1491691 . + . ID=gene-LPH41_RS06540;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LPH41_RS06540;old_locus_tag=LPH41_06540 NZ_CP087680.1 Protein Homology CDS 1490957 1491691 . + 0 ID=cds-WP_038269708.1;Parent=gene-LPH41_RS06540;Dbxref=Genbank:WP_038269708.1;Name=WP_038269708.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893307.1;locus_tag=LPH41_RS06540;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_038269708.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1491722 1493584 . + . ID=gene-LPH41_RS06545;Name=LPH41_RS06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06545;old_locus_tag=LPH41_06545 NZ_CP087680.1 Protein Homology CDS 1491722 1493584 . + 0 ID=cds-WP_038269710.1;Parent=gene-LPH41_RS06545;Dbxref=Genbank:WP_038269710.1;Name=WP_038269710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084493.1;locus_tag=LPH41_RS06545;product=SLC13 family permease;protein_id=WP_038269710.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1495646 1496101 . + . ID=gene-LPH41_RS06550;Name=LPH41_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06550;old_locus_tag=LPH41_06550 NZ_CP087680.1 Protein Homology CDS 1495646 1496101 . + 0 ID=cds-WP_114867229.1;Parent=gene-LPH41_RS06550;Dbxref=Genbank:WP_114867229.1;Name=WP_114867229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367651.1;locus_tag=LPH41_RS06550;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_114867229.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1496112 1497098 . + . ID=gene-LPH41_RS06555;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LPH41_RS06555;old_locus_tag=LPH41_06555 NZ_CP087680.1 Protein Homology CDS 1496112 1497098 . + 0 ID=cds-WP_038269715.1;Parent=gene-LPH41_RS06555;Dbxref=Genbank:WP_038269715.1;Name=WP_038269715.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382751.1;locus_tag=LPH41_RS06555;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_038269715.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1497095 1497358 . + . ID=gene-LPH41_RS06560;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LPH41_RS06560;old_locus_tag=LPH41_06560 NZ_CP087680.1 Protein Homology CDS 1497095 1497358 . + 0 ID=cds-WP_038269717.1;Parent=gene-LPH41_RS06560;Dbxref=Genbank:WP_038269717.1;Name=WP_038269717.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344441.1;locus_tag=LPH41_RS06560;product=cell division protein FtsL;protein_id=WP_038269717.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1497355 1499196 . + . ID=gene-LPH41_RS06565;Name=LPH41_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06565;old_locus_tag=LPH41_06565 NZ_CP087680.1 Protein Homology CDS 1497355 1499196 . + 0 ID=cds-WP_038269719.1;Parent=gene-LPH41_RS06565;Dbxref=Genbank:WP_038269719.1;Name=WP_038269719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098289.1;locus_tag=LPH41_RS06565;product=penicillin-binding protein 2;protein_id=WP_038269719.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1499205 1500677 . + . ID=gene-LPH41_RS06570;Name=LPH41_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06570;old_locus_tag=LPH41_06570 NZ_CP087680.1 Protein Homology CDS 1499205 1500677 . + 0 ID=cds-WP_038269721.1;Parent=gene-LPH41_RS06570;Dbxref=Genbank:WP_038269721.1;Name=WP_038269721.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084483.1;locus_tag=LPH41_RS06570;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_038269721.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1500677 1502083 . + . ID=gene-LPH41_RS06575;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LPH41_RS06575;old_locus_tag=LPH41_06575 NZ_CP087680.1 Protein Homology CDS 1500677 1502083 . + 0 ID=cds-WP_038269723.1;Parent=gene-LPH41_RS06575;Dbxref=Genbank:WP_038269723.1;Name=WP_038269723.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485287.1;locus_tag=LPH41_RS06575;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_038269723.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1502073 1503158 . + . ID=gene-LPH41_RS06580;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LPH41_RS06580;old_locus_tag=LPH41_06580 NZ_CP087680.1 Protein Homology CDS 1502073 1503158 . + 0 ID=cds-WP_038269906.1;Parent=gene-LPH41_RS06580;Dbxref=Genbank:WP_038269906.1;Name=WP_038269906.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452808.1;locus_tag=LPH41_RS06580;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_038269906.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1503158 1504432 . + . ID=gene-LPH41_RS06585;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LPH41_RS06585;old_locus_tag=LPH41_06585 NZ_CP087680.1 Protein Homology CDS 1503158 1504432 . + 0 ID=cds-WP_038269725.1;Parent=gene-LPH41_RS06585;Dbxref=Genbank:WP_038269725.1;Name=WP_038269725.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851210.1;locus_tag=LPH41_RS06585;product=putative lipid II flippase FtsW;protein_id=WP_038269725.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1504423 1505517 . + . ID=gene-LPH41_RS06590;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LPH41_RS06590;old_locus_tag=LPH41_06590 NZ_CP087680.1 Protein Homology CDS 1504423 1505517 . + 0 ID=cds-WP_038269727.1;Parent=gene-LPH41_RS06590;Dbxref=Genbank:WP_038269727.1;Name=WP_038269727.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084474.1;locus_tag=LPH41_RS06590;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_038269727.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1505573 1507006 . + . ID=gene-LPH41_RS06595;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LPH41_RS06595;old_locus_tag=LPH41_06595 NZ_CP087680.1 Protein Homology CDS 1505573 1507006 . + 0 ID=cds-WP_038269729.1;Parent=gene-LPH41_RS06595;Dbxref=Genbank:WP_038269729.1;Name=WP_038269729.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851208.1;locus_tag=LPH41_RS06595;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_038269729.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1507003 1507959 . + . ID=gene-LPH41_RS06600;Name=LPH41_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06600;old_locus_tag=LPH41_06600 NZ_CP087680.1 Protein Homology CDS 1507003 1507959 . + 0 ID=cds-WP_038269731.1;Parent=gene-LPH41_RS06600;Dbxref=Genbank:WP_038269731.1;Name=WP_038269731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851207.1;locus_tag=LPH41_RS06600;product=D-alanine--D-alanine ligase;protein_id=WP_038269731.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1508066 1508902 . + . ID=gene-LPH41_RS06605;Name=LPH41_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06605;old_locus_tag=LPH41_06605 NZ_CP087680.1 Protein Homology CDS 1508066 1508902 . + 0 ID=cds-WP_038269909.1;Parent=gene-LPH41_RS06605;Dbxref=Genbank:WP_038269909.1;Name=WP_038269909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338090.1;locus_tag=LPH41_RS06605;product=cell division protein FtsQ/DivIB;protein_id=WP_038269909.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1508899 1510134 . + . ID=gene-LPH41_RS06610;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LPH41_RS06610;old_locus_tag=LPH41_06610 NZ_CP087680.1 Protein Homology CDS 1508899 1510134 . + 0 ID=cds-WP_038269733.1;Parent=gene-LPH41_RS06610;Dbxref=Genbank:WP_038269733.1;Name=WP_038269733.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398559.1;locus_tag=LPH41_RS06610;product=cell division protein FtsA;protein_id=WP_038269733.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1510307 1511536 . + . ID=gene-LPH41_RS06615;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LPH41_RS06615;old_locus_tag=LPH41_06615 NZ_CP087680.1 Protein Homology CDS 1510307 1511536 . + 0 ID=cds-WP_038269912.1;Parent=gene-LPH41_RS06615;Dbxref=Genbank:WP_038269912.1;Name=WP_038269912.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170527.1;locus_tag=LPH41_RS06615;product=cell division protein FtsZ;protein_id=WP_038269912.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1511895 1512809 . + . ID=gene-LPH41_RS06620;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LPH41_RS06620;old_locus_tag=LPH41_06620 NZ_CP087680.1 Protein Homology CDS 1511895 1512809 . + 0 ID=cds-WP_038269734.1;Parent=gene-LPH41_RS06620;Dbxref=Genbank:WP_038269734.1;Name=WP_038269734.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893324.1;locus_tag=LPH41_RS06620;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_038269734.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1512961 1513407 . - . ID=gene-LPH41_RS06625;Name=LPH41_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06625;old_locus_tag=LPH41_06625 NZ_CP087680.1 Protein Homology CDS 1512961 1513407 . - 0 ID=cds-WP_038269735.1;Parent=gene-LPH41_RS06625;Dbxref=Genbank:WP_038269735.1;Name=WP_038269735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090517.1;locus_tag=LPH41_RS06625;product=DUF721 domain-containing protein;protein_id=WP_038269735.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1513419 1514363 . + . ID=gene-LPH41_RS06630;Name=LPH41_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06630;old_locus_tag=LPH41_06630 NZ_CP087680.1 Protein Homology CDS 1513419 1514363 . + 0 ID=cds-WP_038269737.1;Parent=gene-LPH41_RS06630;Dbxref=Genbank:WP_038269737.1;Name=WP_038269737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158828.1;locus_tag=LPH41_RS06630;product=M23 family metallopeptidase;protein_id=WP_038269737.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1514523 1517267 . + . ID=gene-LPH41_RS06635;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LPH41_RS06635;old_locus_tag=LPH41_06635 NZ_CP087680.1 Protein Homology CDS 1514523 1517267 . + 0 ID=cds-WP_038269738.1;Parent=gene-LPH41_RS06635;Dbxref=Genbank:WP_038269738.1;Name=WP_038269738.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112773.1;locus_tag=LPH41_RS06635;product=preprotein translocase subunit SecA;protein_id=WP_038269738.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1518270 1518713 . + . ID=gene-LPH41_RS12010;Name=LPH41_RS12010;end_range=1518713,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS12010;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 1518270 1518713 . + 0 ID=cds-LPH41_RS12010;Parent=gene-LPH41_RS12010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071704,GO:0004553;end_range=1518713,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: protein motif:HMM:NF012377.2;locus_tag=LPH41_RS12010;partial=true;product=cellulase family glycosylhydrolase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1519284 1519886 . + . ID=gene-LPH41_RS12015;Name=LPH41_RS12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS12015;partial=true;pseudo=true;start_range=.,1519284 NZ_CP087680.1 Protein Homology CDS 1519284 1519886 . + 0 ID=cds-LPH41_RS12015;Parent=gene-LPH41_RS12015;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0030248;gbkey=CDS;go_function=cellulose binding|0030248||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003231419.1;locus_tag=LPH41_RS12015;partial=true;product=expansin EXLX1 family cellulose-binding protein;pseudo=true;start_range=.,1519284;transl_table=11 NZ_CP087680.1 RefSeq gene 1520722 1521570 . - . ID=gene-LPH41_RS06645;Name=LPH41_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06645;old_locus_tag=LPH41_06645 NZ_CP087680.1 Protein Homology CDS 1520722 1521570 . - 0 ID=cds-WP_081755384.1;Parent=gene-LPH41_RS06645;Dbxref=Genbank:WP_081755384.1;Name=WP_081755384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338088.1;locus_tag=LPH41_RS06645;product=SAM-dependent methyltransferase;protein_id=WP_081755384.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1521900 1522562 . + . ID=gene-LPH41_RS06650;Name=LPH41_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06650;old_locus_tag=LPH41_06650 NZ_CP087680.1 Protein Homology CDS 1521900 1522562 . + 0 ID=cds-WP_038269750.1;Parent=gene-LPH41_RS06650;Dbxref=Genbank:WP_038269750.1;Name=WP_038269750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084462.1;locus_tag=LPH41_RS06650;product=DUF2076 domain-containing protein;protein_id=WP_038269750.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1523838 1526705 . - . ID=gene-LPH41_RS06655;Name=LPH41_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06655;old_locus_tag=LPH41_06655 NZ_CP087680.1 Protein Homology CDS 1523838 1526705 . - 0 ID=cds-WP_038269753.1;Parent=gene-LPH41_RS06655;Dbxref=Genbank:WP_038269753.1;Name=WP_038269753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090532.1;locus_tag=LPH41_RS06655;product=pitrilysin family protein;protein_id=WP_038269753.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1527005 1527169 . + . ID=gene-LPH41_RS06660;Name=LPH41_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06660;old_locus_tag=LPH41_06660 NZ_CP087680.1 GeneMarkS-2+ CDS 1527005 1527169 . + 0 ID=cds-WP_160165104.1;Parent=gene-LPH41_RS06660;Dbxref=Genbank:WP_160165104.1;Name=WP_160165104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06660;product=hypothetical protein;protein_id=WP_160165104.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1527211 1528731 . - . ID=gene-LPH41_RS06665;Name=LPH41_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06665;old_locus_tag=LPH41_06665 NZ_CP087680.1 Protein Homology CDS 1527211 1528731 . - 0 ID=cds-WP_230439261.1;Parent=gene-LPH41_RS06665;Dbxref=Genbank:WP_230439261.1;Name=WP_230439261.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084457.1;locus_tag=LPH41_RS06665;product=glycoside hydrolase family 5 protein;protein_id=WP_230439261.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1528837 1530495 . + . ID=gene-LPH41_RS06670;Name=LPH41_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06670;old_locus_tag=LPH41_06670 NZ_CP087680.1 Protein Homology CDS 1528837 1530495 . + 0 ID=cds-WP_038269755.1;Parent=gene-LPH41_RS06670;Dbxref=Genbank:WP_038269755.1;Name=WP_038269755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088130.1;locus_tag=LPH41_RS06670;product=M28 family metallopeptidase;protein_id=WP_038269755.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1530778 1531023 . - . ID=gene-LPH41_RS06675;Name=LPH41_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06675;old_locus_tag=LPH41_06675 NZ_CP087680.1 GeneMarkS-2+ CDS 1530778 1531023 . - 0 ID=cds-WP_152536557.1;Parent=gene-LPH41_RS06675;Dbxref=Genbank:WP_152536557.1;Name=WP_152536557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06675;product=hypothetical protein;protein_id=WP_152536557.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1531248 1531757 . - . ID=gene-LPH41_RS06680;Name=LPH41_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06680;old_locus_tag=LPH41_06680 NZ_CP087680.1 Protein Homology CDS 1531248 1531757 . - 0 ID=cds-WP_038269759.1;Parent=gene-LPH41_RS06680;Dbxref=Genbank:WP_038269759.1;Name=WP_038269759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084453.1;locus_tag=LPH41_RS06680;product=Fur family transcriptional regulator;protein_id=WP_038269759.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1531775 1533178 . - . ID=gene-LPH41_RS06685;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LPH41_RS06685;old_locus_tag=LPH41_06685 NZ_CP087680.1 Protein Homology CDS 1531775 1533178 . - 0 ID=cds-WP_038269762.1;Parent=gene-LPH41_RS06685;Dbxref=Genbank:WP_038269762.1;Name=WP_038269762.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237481.1;locus_tag=LPH41_RS06685;product=glutamate--tRNA ligase;protein_id=WP_038269762.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1533460 1533780 . - . ID=gene-LPH41_RS06690;Name=LPH41_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06690;old_locus_tag=LPH41_06690 NZ_CP087680.1 GeneMarkS-2+ CDS 1533460 1533780 . - 0 ID=cds-WP_038269764.1;Parent=gene-LPH41_RS06690;Dbxref=Genbank:WP_038269764.1;Name=WP_038269764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06690;product=hypothetical protein;protein_id=WP_038269764.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1534250 1534423 . + . ID=gene-LPH41_RS06695;Name=LPH41_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06695;old_locus_tag=LPH41_06695 NZ_CP087680.1 GeneMarkS-2+ CDS 1534250 1534423 . + 0 ID=cds-WP_160165105.1;Parent=gene-LPH41_RS06695;Dbxref=Genbank:WP_160165105.1;Name=WP_160165105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06695;product=hypothetical protein;protein_id=WP_160165105.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1535139 1536314 . + . ID=gene-LPH41_RS06700;Name=LPH41_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06700;old_locus_tag=LPH41_06700 NZ_CP087680.1 Protein Homology CDS 1535139 1536314 . + 0 ID=cds-WP_038269917.1;Parent=gene-LPH41_RS06700;Dbxref=Genbank:WP_038269917.1;Name=WP_038269917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445624.1;locus_tag=LPH41_RS06700;product=phosphoglycerate kinase;protein_id=WP_038269917.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1537033 1538499 . + . ID=gene-LPH41_RS06705;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LPH41_RS06705;old_locus_tag=LPH41_06705 NZ_CP087680.1 Protein Homology CDS 1537033 1538499 . + 0 ID=cds-WP_038269766.1;Parent=gene-LPH41_RS06705;Dbxref=Genbank:WP_038269766.1;Name=WP_038269766.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487265.1;locus_tag=LPH41_RS06705;product=pyruvate kinase;protein_id=WP_038269766.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1538840 1539169 . + . ID=gene-LPH41_RS06710;Name=LPH41_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06710;old_locus_tag=LPH41_06710 NZ_CP087680.1 GeneMarkS-2+ CDS 1538840 1539169 . + 0 ID=cds-WP_038269769.1;Parent=gene-LPH41_RS06710;Dbxref=Genbank:WP_038269769.1;Name=WP_038269769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06710;product=hypothetical protein;protein_id=WP_038269769.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1539272 1540276 . + . ID=gene-LPH41_RS06715;Name=LPH41_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06715;old_locus_tag=LPH41_06715 NZ_CP087680.1 Protein Homology CDS 1539272 1540276 . + 0 ID=cds-WP_038269772.1;Parent=gene-LPH41_RS06715;Dbxref=Genbank:WP_038269772.1;Name=WP_038269772.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437525.1;locus_tag=LPH41_RS06715;product=fructose-bisphosphate aldolase class I;protein_id=WP_038269772.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1541273 1541593 . + . ID=gene-LPH41_RS06720;Name=LPH41_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06720;old_locus_tag=LPH41_06720 NZ_CP087680.1 GeneMarkS-2+ CDS 1541273 1541593 . + 0 ID=cds-WP_038269774.1;Parent=gene-LPH41_RS06720;Dbxref=Genbank:WP_038269774.1;Name=WP_038269774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06720;product=hypothetical protein;protein_id=WP_038269774.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1541707 1542666 . - . ID=gene-LPH41_RS06725;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LPH41_RS06725;old_locus_tag=LPH41_06725 NZ_CP087680.1 Protein Homology CDS 1541707 1542666 . - 0 ID=cds-WP_038269776.1;Parent=gene-LPH41_RS06725;Dbxref=Genbank:WP_038269776.1;Name=WP_038269776.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851740.1;locus_tag=LPH41_RS06725;product=cysteine synthase A;protein_id=WP_038269776.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1542726 1544156 . - . ID=gene-LPH41_RS06730;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LPH41_RS06730;old_locus_tag=LPH41_06730 NZ_CP087680.1 Protein Homology CDS 1542726 1544156 . - 0 ID=cds-WP_038269779.1;Parent=gene-LPH41_RS06730;Dbxref=Genbank:WP_038269779.1;Name=WP_038269779.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851739.1;locus_tag=LPH41_RS06730;product=siroheme synthase CysG;protein_id=WP_038269779.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1544308 1545285 . + . ID=gene-LPH41_RS06735;Name=LPH41_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06735;old_locus_tag=LPH41_06735 NZ_CP087680.1 Protein Homology CDS 1544308 1545285 . + 0 ID=cds-WP_038269781.1;Parent=gene-LPH41_RS06735;Dbxref=Genbank:WP_038269781.1;Name=WP_038269781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477207.1;locus_tag=LPH41_RS06735;product=LysR family transcriptional regulator;protein_id=WP_038269781.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1545497 1545649 . - . ID=gene-LPH41_RS06740;Name=LPH41_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06740;old_locus_tag=LPH41_06740 NZ_CP087680.1 GeneMarkS-2+ CDS 1545497 1545649 . - 0 ID=cds-WP_160165107.1;Parent=gene-LPH41_RS06740;Dbxref=Genbank:WP_160165107.1;Name=WP_160165107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06740;product=hypothetical protein;protein_id=WP_160165107.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1545681 1546283 . - . ID=gene-LPH41_RS06745;Name=LPH41_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06745;old_locus_tag=LPH41_06745 NZ_CP087680.1 Protein Homology CDS 1545681 1546283 . - 0 ID=cds-WP_038269784.1;Parent=gene-LPH41_RS06745;Dbxref=Genbank:WP_038269784.1;Name=WP_038269784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014573.2;locus_tag=LPH41_RS06745;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_038269784.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1546616 1547383 . + . ID=gene-LPH41_RS06750;Name=LPH41_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06750;old_locus_tag=LPH41_06750 NZ_CP087680.1 Protein Homology CDS 1546616 1547383 . + 0 ID=cds-WP_230428258.1;Parent=gene-LPH41_RS06750;Dbxref=Genbank:WP_230428258.1;Name=WP_230428258.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018431.2;locus_tag=LPH41_RS06750;product=AraC family transcriptional regulator;protein_id=WP_230428258.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1547567 1548748 . - . ID=gene-LPH41_RS06755;Name=LPH41_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06755;old_locus_tag=LPH41_06755 NZ_CP087680.1 Protein Homology CDS 1547567 1548748 . - 0 ID=cds-WP_038269789.1;Parent=gene-LPH41_RS06755;Dbxref=Genbank:WP_038269789.1;Name=WP_038269789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088154.1;locus_tag=LPH41_RS06755;product=UbiH/UbiF family hydroxylase;protein_id=WP_038269789.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1548745 1549953 . - . ID=gene-LPH41_RS06760;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=LPH41_RS06760;old_locus_tag=LPH41_06760 NZ_CP087680.1 Protein Homology CDS 1548745 1549953 . - 0 ID=cds-WP_038269792.1;Parent=gene-LPH41_RS06760;Dbxref=Genbank:WP_038269792.1;Name=WP_038269792.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084429.1;locus_tag=LPH41_RS06760;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_038269792.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1550015 1550185 . - . ID=gene-LPH41_RS06765;Name=LPH41_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06765;old_locus_tag=LPH41_06765 NZ_CP087680.1 GeneMarkS-2+ CDS 1550015 1550185 . - 0 ID=cds-WP_160165108.1;Parent=gene-LPH41_RS06765;Dbxref=Genbank:WP_160165108.1;Name=WP_160165108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06765;product=hypothetical protein;protein_id=WP_160165108.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1551330 1553708 . + . ID=gene-LPH41_RS06770;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LPH41_RS06770;old_locus_tag=LPH41_06770 NZ_CP087680.1 Protein Homology CDS 1551330 1553708 . + 0 ID=cds-WP_038269796.1;Parent=gene-LPH41_RS06770;Dbxref=Genbank:WP_038269796.1;Name=WP_038269796.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084427.1;locus_tag=LPH41_RS06770;product=LPS-assembly protein LptD;protein_id=WP_038269796.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1553705 1555069 . + . ID=gene-LPH41_RS06775;Name=LPH41_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06775;old_locus_tag=LPH41_06775 NZ_CP087680.1 Protein Homology CDS 1553705 1555069 . + 0 ID=cds-WP_038269799.1;Parent=gene-LPH41_RS06775;Dbxref=Genbank:WP_038269799.1;Name=WP_038269799.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851732.1;locus_tag=LPH41_RS06775;product=peptidylprolyl isomerase;protein_id=WP_038269799.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1555074 1556066 . + . ID=gene-LPH41_RS06780;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LPH41_RS06780;old_locus_tag=LPH41_06780 NZ_CP087680.1 Protein Homology CDS 1555074 1556066 . + 0 ID=cds-WP_038269801.1;Parent=gene-LPH41_RS06780;Dbxref=Genbank:WP_038269801.1;Name=WP_038269801.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893359.1;locus_tag=LPH41_RS06780;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_038269801.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1556356 1558236 . - . ID=gene-LPH41_RS06785;Name=LPH41_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06785;old_locus_tag=LPH41_06785 NZ_CP087680.1 Protein Homology CDS 1556356 1558236 . - 0 ID=cds-WP_051482231.1;Parent=gene-LPH41_RS06785;Dbxref=Genbank:WP_051482231.1;Name=WP_051482231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348229.1;locus_tag=LPH41_RS06785;product=beta-galactosidase;protein_id=WP_051482231.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1558422 1560818 . - . ID=gene-LPH41_RS06790;Name=LPH41_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06790;old_locus_tag=LPH41_06790 NZ_CP087680.1 Protein Homology CDS 1558422 1560818 . - 0 ID=cds-WP_038269803.1;Parent=gene-LPH41_RS06790;Dbxref=Genbank:WP_038269803.1;Name=WP_038269803.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084413.1;locus_tag=LPH41_RS06790;product=GH92 family glycosyl hydrolase;protein_id=WP_038269803.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1560876 1562402 . - . ID=gene-LPH41_RS06795;Name=LPH41_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06795;old_locus_tag=LPH41_06795 NZ_CP087680.1 Protein Homology CDS 1560876 1562402 . - 0 ID=cds-WP_038269805.1;Parent=gene-LPH41_RS06795;Dbxref=Genbank:WP_038269805.1;Name=WP_038269805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084411.1;locus_tag=LPH41_RS06795;product=glycoside hydrolase family 125 protein;protein_id=WP_038269805.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1562511 1562657 . - . ID=gene-LPH41_RS06800;Name=LPH41_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06800;old_locus_tag=LPH41_06800 NZ_CP087680.1 GeneMarkS-2+ CDS 1562511 1562657 . - 0 ID=cds-WP_160165110.1;Parent=gene-LPH41_RS06800;Dbxref=Genbank:WP_160165110.1;Name=WP_160165110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06800;product=hypothetical protein;protein_id=WP_160165110.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1562784 1565438 . - . ID=gene-LPH41_RS06805;Name=LPH41_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06805;old_locus_tag=LPH41_06805 NZ_CP087680.1 Protein Homology CDS 1562784 1565438 . - 0 ID=cds-WP_038269807.1;Parent=gene-LPH41_RS06805;Dbxref=Genbank:WP_038269807.1;Name=WP_038269807.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338083.1;locus_tag=LPH41_RS06805;product=glycoside hydrolase family 3 protein;protein_id=WP_038269807.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1565484 1568165 . - . ID=gene-LPH41_RS06810;Name=LPH41_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06810;old_locus_tag=LPH41_06810 NZ_CP087680.1 Protein Homology CDS 1565484 1568165 . - 0 ID=cds-WP_038269809.1;Parent=gene-LPH41_RS06810;Dbxref=Genbank:WP_038269809.1;Name=WP_038269809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088171.1;locus_tag=LPH41_RS06810;product=glycoside hydrolase family 2 protein;protein_id=WP_038269809.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1568186 1570621 . - . ID=gene-LPH41_RS06815;Name=LPH41_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06815;old_locus_tag=LPH41_06815 NZ_CP087680.1 Protein Homology CDS 1568186 1570621 . - 0 ID=cds-WP_038269811.1;Parent=gene-LPH41_RS06815;Dbxref=Genbank:WP_038269811.1;Name=WP_038269811.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851724.1;locus_tag=LPH41_RS06815;product=family 20 glycosylhydrolase;protein_id=WP_038269811.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1570705 1571760 . - . ID=gene-LPH41_RS06820;Name=LPH41_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06820;old_locus_tag=LPH41_06820 NZ_CP087680.1 Protein Homology CDS 1570705 1571760 . - 0 ID=cds-WP_038269813.1;Parent=gene-LPH41_RS06820;Dbxref=Genbank:WP_038269813.1;Name=WP_038269813.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970189.1;locus_tag=LPH41_RS06820;product=glycosyl hydrolase family 18 protein;protein_id=WP_038269813.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1572351 1572818 . - . ID=gene-LPH41_RS06825;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LPH41_RS06825;old_locus_tag=LPH41_06825 NZ_CP087680.1 Protein Homology CDS 1572351 1572818 . - 0 ID=cds-WP_038269923.1;Parent=gene-LPH41_RS06825;Dbxref=Genbank:WP_038269923.1;Name=WP_038269923.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088178.1;locus_tag=LPH41_RS06825;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_038269923.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1572835 1572993 . + . ID=gene-LPH41_RS06830;Name=LPH41_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06830;old_locus_tag=LPH41_06830 NZ_CP087680.1 GeneMarkS-2+ CDS 1572835 1572993 . + 0 ID=cds-WP_160165111.1;Parent=gene-LPH41_RS06830;Dbxref=Genbank:WP_160165111.1;Name=WP_160165111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06830;product=hypothetical protein;protein_id=WP_160165111.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1573301 1574575 . + . ID=gene-LPH41_RS06835;Name=LPH41_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06835;old_locus_tag=LPH41_06835 NZ_CP087680.1 Protein Homology CDS 1573301 1574575 . + 0 ID=cds-WP_038269817.1;Parent=gene-LPH41_RS06835;Dbxref=Genbank:WP_038269817.1;Name=WP_038269817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088180.1;locus_tag=LPH41_RS06835;product=D-amino acid dehydrogenase;protein_id=WP_038269817.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1574588 1575676 . + . ID=gene-LPH41_RS06840;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LPH41_RS06840;old_locus_tag=LPH41_06840 NZ_CP087680.1 Protein Homology CDS 1574588 1575676 . + 0 ID=cds-WP_038269820.1;Parent=gene-LPH41_RS06840;Dbxref=Genbank:WP_038269820.1;Name=WP_038269820.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088182.1;locus_tag=LPH41_RS06840;product=alanine racemase;protein_id=WP_038269820.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1576342 1577817 . + . ID=gene-LPH41_RS06845;Name=LPH41_RS06845;end_range=1577817,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS06845;old_locus_tag=LPH41_06845;partial=true;pseudo=true;start_range=.,1576342 NZ_CP087680.1 Protein Homology CDS 1576342 1577817 . + 0 ID=cds-LPH41_RS06845;Parent=gene-LPH41_RS06845;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1577817,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157452.1;locus_tag=LPH41_RS06845;partial=true;product=PAS domain-containing sensor histidine kinase;pseudo=true;start_range=.,1576342;transl_table=11 NZ_CP087680.1 RefSeq gene 1578891 1578967 . - . ID=gene-LPH41_RS06850;Name=LPH41_RS06850;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS06850;old_locus_tag=LPH41_06850 NZ_CP087680.1 tRNAscan-SE tRNA 1578891 1578967 . - . ID=rna-LPH41_RS06850;Parent=gene-LPH41_RS06850;anticodon=(pos:complement(1578931..1578933));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06850;product=tRNA-Pro NZ_CP087680.1 tRNAscan-SE exon 1578891 1578967 . - . ID=exon-LPH41_RS06850-1;Parent=rna-LPH41_RS06850;anticodon=(pos:complement(1578931..1578933));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS06850;product=tRNA-Pro NZ_CP087680.1 RefSeq gene 1579551 1580321 . - . ID=gene-LPH41_RS06855;Name=LPH41_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06855;old_locus_tag=LPH41_06855 NZ_CP087680.1 Protein Homology CDS 1579551 1580321 . - 0 ID=cds-WP_051482232.1;Parent=gene-LPH41_RS06855;Dbxref=Genbank:WP_051482232.1;Name=WP_051482232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088187.1;locus_tag=LPH41_RS06855;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_051482232.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1580333 1580947 . - . ID=gene-LPH41_RS06860;Name=LPH41_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06860;old_locus_tag=LPH41_06860 NZ_CP087680.1 Protein Homology CDS 1580333 1580947 . - 0 ID=cds-WP_038269827.1;Parent=gene-LPH41_RS06860;Dbxref=Genbank:WP_038269827.1;Name=WP_038269827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481846.1;locus_tag=LPH41_RS06860;product=YqaA family protein;protein_id=WP_038269827.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1580972 1581649 . - . ID=gene-LPH41_RS06865;Name=LPH41_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06865;old_locus_tag=LPH41_06865 NZ_CP087680.1 Protein Homology CDS 1580972 1581649 . - 0 ID=cds-WP_038269829.1;Parent=gene-LPH41_RS06865;Dbxref=Genbank:WP_038269829.1;Name=WP_038269829.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503664.1;locus_tag=LPH41_RS06865;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_038269829.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1581646 1582434 . - . ID=gene-LPH41_RS06870;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LPH41_RS06870;old_locus_tag=LPH41_06870 NZ_CP087680.1 Protein Homology CDS 1581646 1582434 . - 0 ID=cds-WP_038269831.1;Parent=gene-LPH41_RS06870;Dbxref=Genbank:WP_038269831.1;Name=WP_038269831.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084374.1;locus_tag=LPH41_RS06870;product=5'/3'-nucleotidase SurE;protein_id=WP_038269831.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1583388 1583729 . - . ID=gene-LPH41_RS06875;Name=LPH41_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06875;old_locus_tag=LPH41_06875 NZ_CP087680.1 GeneMarkS-2+ CDS 1583388 1583729 . - 0 ID=cds-WP_038269832.1;Parent=gene-LPH41_RS06875;Dbxref=Genbank:WP_038269832.1;Name=WP_038269832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06875;product=hypothetical protein;protein_id=WP_038269832.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1584850 1585722 . - . ID=gene-LPH41_RS06880;Name=LPH41_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06880;old_locus_tag=LPH41_06880 NZ_CP087680.1 Protein Homology CDS 1584850 1585722 . - 0 ID=cds-WP_038269928.1;Parent=gene-LPH41_RS06880;Dbxref=Genbank:WP_038269928.1;Name=WP_038269928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851712.1;locus_tag=LPH41_RS06880;product=M23 family metallopeptidase;protein_id=WP_038269928.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1586043 1587071 . + . ID=gene-LPH41_RS06885;Name=LPH41_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06885;old_locus_tag=LPH41_06885 NZ_CP087680.1 Protein Homology CDS 1586043 1587071 . + 0 ID=cds-WP_038269931.1;Parent=gene-LPH41_RS06885;Dbxref=Genbank:WP_038269931.1;Name=WP_038269931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084371.1;locus_tag=LPH41_RS06885;product=homoserine O-succinyltransferase;protein_id=WP_038269931.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1587068 1588273 . + . ID=gene-LPH41_RS06890;Name=LPH41_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06890;old_locus_tag=LPH41_06890 NZ_CP087680.1 Protein Homology CDS 1587068 1588273 . + 0 ID=cds-WP_038269836.1;Parent=gene-LPH41_RS06890;Dbxref=Genbank:WP_038269836.1;Name=WP_038269836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014038152.1;locus_tag=LPH41_RS06890;product=O-succinylhomoserine (thiol)-lyase;protein_id=WP_038269836.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1589383 1589589 . - . ID=gene-LPH41_RS06895;Name=LPH41_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06895;old_locus_tag=LPH41_06895 NZ_CP087680.1 GeneMarkS-2+ CDS 1589383 1589589 . - 0 ID=cds-WP_152536559.1;Parent=gene-LPH41_RS06895;Dbxref=Genbank:WP_152536559.1;Name=WP_152536559.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06895;product=hypothetical protein;protein_id=WP_152536559.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1589803 1590705 . + . ID=gene-LPH41_RS06900;Name=LPH41_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06900;old_locus_tag=LPH41_06900 NZ_CP087680.1 Protein Homology CDS 1589803 1590705 . + 0 ID=cds-WP_038269838.1;Parent=gene-LPH41_RS06900;Dbxref=Genbank:WP_038269838.1;Name=WP_038269838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084369.1;locus_tag=LPH41_RS06900;product=cation diffusion facilitator family transporter;protein_id=WP_038269838.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1590913 1591965 . - . ID=gene-LPH41_RS06905;Name=LPH41_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06905;old_locus_tag=LPH41_06905 NZ_CP087680.1 Protein Homology CDS 1590913 1591965 . - 0 ID=cds-WP_051482233.1;Parent=gene-LPH41_RS06905;Dbxref=Genbank:WP_051482233.1;Name=WP_051482233.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LPH41_RS06905;product=acyltransferase;protein_id=WP_051482233.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1592246 1592374 . + . ID=gene-LPH41_RS12020;Name=LPH41_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12020 NZ_CP087680.1 GeneMarkS-2+ CDS 1592246 1592374 . + 0 ID=cds-WP_267903163.1;Parent=gene-LPH41_RS12020;Dbxref=Genbank:WP_267903163.1;Name=WP_267903163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12020;product=hypothetical protein;protein_id=WP_267903163.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1592668 1594479 . - . ID=gene-LPH41_RS06910;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LPH41_RS06910;old_locus_tag=LPH41_06910 NZ_CP087680.1 Protein Homology CDS 1592668 1594479 . - 0 ID=cds-WP_038269840.1;Parent=gene-LPH41_RS06910;Dbxref=Genbank:WP_038269840.1;Name=WP_038269840.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084365.1;locus_tag=LPH41_RS06910;product=dihydrolipoyl dehydrogenase;protein_id=WP_038269840.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1595049 1596701 . - . ID=gene-LPH41_RS06915;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=LPH41_RS06915;old_locus_tag=LPH41_06915 NZ_CP087680.1 Protein Homology CDS 1595049 1596701 . - 0 ID=cds-WP_038269842.1;Parent=gene-LPH41_RS06915;Dbxref=Genbank:WP_038269842.1;Name=WP_038269842.1;Ontology_term=GO:0006086,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893389.1;locus_tag=LPH41_RS06915;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_038269842.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1596893 1597204 . - . ID=gene-LPH41_RS06920;Name=LPH41_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06920;old_locus_tag=LPH41_06920 NZ_CP087680.1 GeneMarkS-2+ CDS 1596893 1597204 . - 0 ID=cds-WP_038269844.1;Parent=gene-LPH41_RS06920;Dbxref=Genbank:WP_038269844.1;Name=WP_038269844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS06920;product=hypothetical protein;protein_id=WP_038269844.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1597920 1598564 . + . ID=gene-LPH41_RS06925;Name=LPH41_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06925;old_locus_tag=LPH41_06925 NZ_CP087680.1 Protein Homology CDS 1597920 1598564 . + 0 ID=cds-WP_038269846.1;Parent=gene-LPH41_RS06925;Dbxref=Genbank:WP_038269846.1;Name=WP_038269846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974312.1;locus_tag=LPH41_RS06925;product=outer membrane beta-barrel protein;protein_id=WP_038269846.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1598662 1599447 . - . ID=gene-LPH41_RS06930;Name=LPH41_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06930;old_locus_tag=LPH41_06930 NZ_CP087680.1 Protein Homology CDS 1598662 1599447 . - 0 ID=cds-WP_038269848.1;Parent=gene-LPH41_RS06930;Dbxref=Genbank:WP_038269848.1;Name=WP_038269848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893393.1;locus_tag=LPH41_RS06930;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_038269848.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1599545 1600252 . - . ID=gene-LPH41_RS06935;Name=LPH41_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06935;old_locus_tag=LPH41_06935 NZ_CP087680.1 Protein Homology CDS 1599545 1600252 . - 0 ID=cds-WP_051482234.1;Parent=gene-LPH41_RS06935;Dbxref=Genbank:WP_051482234.1;Name=WP_051482234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038712.1;locus_tag=LPH41_RS06935;product=ABC transporter permease;protein_id=WP_051482234.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1600249 1601256 . - . ID=gene-LPH41_RS06940;Name=LPH41_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06940;old_locus_tag=LPH41_06940 NZ_CP087680.1 Protein Homology CDS 1600249 1601256 . - 0 ID=cds-WP_038269940.1;Parent=gene-LPH41_RS06940;Dbxref=Genbank:WP_038269940.1;Name=WP_038269940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038713.1;locus_tag=LPH41_RS06940;product=methionine ABC transporter ATP-binding protein;protein_id=WP_038269940.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1602463 1602624 . - . ID=gene-LPH41_RS06945;Name=LPH41_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06945;old_locus_tag=LPH41_06945 NZ_CP087680.1 Protein Homology CDS 1602463 1602624 . - 0 ID=cds-WP_171898068.1;Parent=gene-LPH41_RS06945;Dbxref=Genbank:WP_171898068.1;Name=WP_171898068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088209.1;locus_tag=LPH41_RS06945;product=hypothetical protein;protein_id=WP_171898068.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1602995 1603714 . + . ID=gene-LPH41_RS06950;Name=LPH41_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06950;old_locus_tag=LPH41_06950 NZ_CP087680.1 Protein Homology CDS 1602995 1603714 . + 0 ID=cds-WP_038269943.1;Parent=gene-LPH41_RS06950;Dbxref=Genbank:WP_038269943.1;Name=WP_038269943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098260.1;locus_tag=LPH41_RS06950;product=polysaccharide deacetylase family protein;protein_id=WP_038269943.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1603711 1604823 . + . ID=gene-LPH41_RS06955;Name=LPH41_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06955;old_locus_tag=LPH41_06955 NZ_CP087680.1 Protein Homology CDS 1603711 1604823 . + 0 ID=cds-WP_038269853.1;Parent=gene-LPH41_RS06955;Dbxref=Genbank:WP_038269853.1;Name=WP_038269853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893399.1;locus_tag=LPH41_RS06955;product=glycosyltransferase family 4 protein;protein_id=WP_038269853.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1605550 1606212 . + . ID=gene-LPH41_RS06960;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LPH41_RS06960;old_locus_tag=LPH41_06960 NZ_CP087680.1 Protein Homology CDS 1605550 1606212 . + 0 ID=cds-WP_038269855.1;Parent=gene-LPH41_RS06960;Dbxref=Genbank:WP_038269855.1;Name=WP_038269855.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902447.1;locus_tag=LPH41_RS06960;product=carbonate dehydratase;protein_id=WP_038269855.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1606992 1607537 . + . ID=gene-LPH41_RS06965;Name=LPH41_RS06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS06965;old_locus_tag=LPH41_06965;partial=true;pseudo=true;start_range=.,1606992 NZ_CP087680.1 Protein Homology CDS 1606992 1607537 . + 0 ID=cds-LPH41_RS06965;Parent=gene-LPH41_RS06965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574705.1;locus_tag=LPH41_RS06965;partial=true;product=D-alanyl-D-alanine carboxypeptidase family protein;pseudo=true;start_range=.,1606992;transl_table=11 NZ_CP087680.1 RefSeq gene 1607557 1609560 . - . ID=gene-LPH41_RS06970;Name=LPH41_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06970;old_locus_tag=LPH41_06970 NZ_CP087680.1 Protein Homology CDS 1607557 1609560 . - 0 ID=cds-WP_038269857.1;Parent=gene-LPH41_RS06970;Dbxref=Genbank:WP_038269857.1;Name=WP_038269857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338070.1;locus_tag=LPH41_RS06970;product=ATP-dependent DNA helicase;protein_id=WP_038269857.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1609680 1610231 . - . ID=gene-LPH41_RS06975;Name=LPH41_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06975;old_locus_tag=LPH41_06975 NZ_CP087680.1 Protein Homology CDS 1609680 1610231 . - 0 ID=cds-WP_038269860.1;Parent=gene-LPH41_RS06975;Dbxref=Genbank:WP_038269860.1;Name=WP_038269860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088223.1;locus_tag=LPH41_RS06975;product=hypothetical protein;protein_id=WP_038269860.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1610228 1612606 . - . ID=gene-LPH41_RS06980;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LPH41_RS06980;old_locus_tag=LPH41_06980 NZ_CP087680.1 Protein Homology CDS 1610228 1612606 . - 0 ID=cds-WP_051482236.1;Parent=gene-LPH41_RS06980;Dbxref=Genbank:WP_051482236.1;Name=WP_051482236.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852547.1;locus_tag=LPH41_RS06980;product=penicillin-binding protein 1B;protein_id=WP_051482236.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1612701 1614029 . + . ID=gene-LPH41_RS06985;Name=LPH41_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06985;old_locus_tag=LPH41_06985 NZ_CP087680.1 Protein Homology CDS 1612701 1614029 . + 0 ID=cds-WP_038269863.1;Parent=gene-LPH41_RS06985;Dbxref=Genbank:WP_038269863.1;Name=WP_038269863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088227.1;locus_tag=LPH41_RS06985;product=glycosyltransferase;protein_id=WP_038269863.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1614051 1614281 . + . ID=gene-LPH41_RS06990;Name=LPH41_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06990;old_locus_tag=LPH41_06990 NZ_CP087680.1 Protein Homology CDS 1614051 1614281 . + 0 ID=cds-WP_038269866.1;Parent=gene-LPH41_RS06990;Dbxref=Genbank:WP_038269866.1;Name=WP_038269866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852549.1;locus_tag=LPH41_RS06990;product=hypothetical protein;protein_id=WP_038269866.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1614278 1616848 . + . ID=gene-LPH41_RS06995;Name=LPH41_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS06995;old_locus_tag=LPH41_06995 NZ_CP087680.1 Protein Homology CDS 1614278 1616848 . + 0 ID=cds-WP_038269868.1;Parent=gene-LPH41_RS06995;Dbxref=Genbank:WP_038269868.1;Name=WP_038269868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098254.1;locus_tag=LPH41_RS06995;product=glycosyltransferase family 1 protein;protein_id=WP_038269868.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1618043 1618864 . - . ID=gene-LPH41_RS07000;Name=LPH41_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07000;old_locus_tag=LPH41_07000 NZ_CP087680.1 Protein Homology CDS 1618043 1618864 . - 0 ID=cds-WP_038269871.1;Parent=gene-LPH41_RS07000;Dbxref=Genbank:WP_038269871.1;Name=WP_038269871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018971963.1;locus_tag=LPH41_RS07000;product=oxidoreductase;protein_id=WP_038269871.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1618969 1619430 . + . ID=gene-LPH41_RS07005;Name=LPH41_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07005;old_locus_tag=LPH41_07005 NZ_CP087680.1 Protein Homology CDS 1618969 1619430 . + 0 ID=cds-WP_038269873.1;Parent=gene-LPH41_RS07005;Dbxref=Genbank:WP_038269873.1;Name=WP_038269873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452058.1;locus_tag=LPH41_RS07005;product=helix-turn-helix domain-containing protein;protein_id=WP_038269873.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1619622 1619819 . + . ID=gene-LPH41_RS07010;Name=LPH41_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07010;old_locus_tag=LPH41_07010 NZ_CP087680.1 GeneMarkS-2+ CDS 1619622 1619819 . + 0 ID=cds-WP_200866175.1;Parent=gene-LPH41_RS07010;Dbxref=Genbank:WP_200866175.1;Name=WP_200866175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07010;product=hypothetical protein;protein_id=WP_200866175.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1619825 1620031 . + . ID=gene-LPH41_RS07015;Name=LPH41_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07015;old_locus_tag=LPH41_07015 NZ_CP087680.1 GeneMarkS-2+ CDS 1619825 1620031 . + 0 ID=cds-WP_200866176.1;Parent=gene-LPH41_RS07015;Dbxref=Genbank:WP_200866176.1;Name=WP_200866176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07015;product=hypothetical protein;protein_id=WP_200866176.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1620068 1620313 . + . ID=gene-LPH41_RS07020;Name=LPH41_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07020;old_locus_tag=LPH41_07020 NZ_CP087680.1 GeneMarkS-2+ CDS 1620068 1620313 . + 0 ID=cds-WP_152536560.1;Parent=gene-LPH41_RS07020;Dbxref=Genbank:WP_152536560.1;Name=WP_152536560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07020;product=hypothetical protein;protein_id=WP_152536560.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1620840 1621031 . + . ID=gene-LPH41_RS07025;Name=LPH41_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07025;old_locus_tag=LPH41_07025 NZ_CP087680.1 GeneMarkS-2+ CDS 1620840 1621031 . + 0 ID=cds-WP_038269875.1;Parent=gene-LPH41_RS07025;Dbxref=Genbank:WP_038269875.1;Name=WP_038269875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07025;product=hypothetical protein;protein_id=WP_038269875.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1621035 1621110 . - . ID=gene-LPH41_RS07030;Name=LPH41_RS07030;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07030;old_locus_tag=LPH41_07030 NZ_CP087680.1 tRNAscan-SE tRNA 1621035 1621110 . - . ID=rna-LPH41_RS07030;Parent=gene-LPH41_RS07030;anticodon=(pos:complement(1621075..1621077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07030;product=tRNA-Lys NZ_CP087680.1 tRNAscan-SE exon 1621035 1621110 . - . ID=exon-LPH41_RS07030-1;Parent=rna-LPH41_RS07030;anticodon=(pos:complement(1621075..1621077));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07030;product=tRNA-Lys NZ_CP087680.1 RefSeq gene 1621212 1621288 . - . ID=gene-LPH41_RS07035;Name=LPH41_RS07035;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07035;old_locus_tag=LPH41_07035 NZ_CP087680.1 tRNAscan-SE tRNA 1621212 1621288 . - . ID=rna-LPH41_RS07035;Parent=gene-LPH41_RS07035;anticodon=(pos:complement(1621252..1621254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07035;product=tRNA-His NZ_CP087680.1 tRNAscan-SE exon 1621212 1621288 . - . ID=exon-LPH41_RS07035-1;Parent=rna-LPH41_RS07035;anticodon=(pos:complement(1621252..1621254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07035;product=tRNA-His NZ_CP087680.1 RefSeq gene 1621328 1621406 . - . ID=gene-LPH41_RS07040;Name=LPH41_RS07040;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07040;old_locus_tag=LPH41_07040 NZ_CP087680.1 tRNAscan-SE tRNA 1621328 1621406 . - . ID=rna-LPH41_RS07040;Parent=gene-LPH41_RS07040;anticodon=(pos:complement(1621368..1621370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07040;product=tRNA-Arg NZ_CP087680.1 tRNAscan-SE exon 1621328 1621406 . - . ID=exon-LPH41_RS07040-1;Parent=rna-LPH41_RS07040;anticodon=(pos:complement(1621368..1621370));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07040;product=tRNA-Arg NZ_CP087680.1 RefSeq gene 1621481 1621557 . - . ID=gene-LPH41_RS07045;Name=LPH41_RS07045;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07045;old_locus_tag=LPH41_07045 NZ_CP087680.1 tRNAscan-SE tRNA 1621481 1621557 . - . ID=rna-LPH41_RS07045;Parent=gene-LPH41_RS07045;anticodon=(pos:complement(1621521..1621523));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07045;product=tRNA-Pro NZ_CP087680.1 tRNAscan-SE exon 1621481 1621557 . - . ID=exon-LPH41_RS07045-1;Parent=rna-LPH41_RS07045;anticodon=(pos:complement(1621521..1621523));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07045;product=tRNA-Pro NZ_CP087680.1 RefSeq gene 1621731 1622492 . + . ID=gene-LPH41_RS07050;Name=LPH41_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07050;old_locus_tag=LPH41_07050 NZ_CP087680.1 Protein Homology CDS 1621731 1622492 . + 0 ID=cds-WP_038269876.1;Parent=gene-LPH41_RS07050;Dbxref=Genbank:WP_038269876.1;Name=WP_038269876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927840.1;locus_tag=LPH41_RS07050;product=Bax inhibitor-1/YccA family protein;protein_id=WP_038269876.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1623361 1623585 . - . ID=gene-LPH41_RS07055;Name=LPH41_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07055;old_locus_tag=LPH41_07055 NZ_CP087680.1 GeneMarkS-2+ CDS 1623361 1623585 . - 0 ID=cds-WP_152536561.1;Parent=gene-LPH41_RS07055;Dbxref=Genbank:WP_152536561.1;Name=WP_152536561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07055;product=hypothetical protein;protein_id=WP_152536561.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1624575 1629056 . - . ID=gene-LPH41_RS07060;Name=LPH41_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07060;old_locus_tag=LPH41_07060 NZ_CP087680.1 Protein Homology CDS 1624575 1629056 . - 0 ID=cds-WP_230439262.1;Parent=gene-LPH41_RS07060;Dbxref=Genbank:WP_230439262.1;Name=WP_230439262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085599.1;locus_tag=LPH41_RS07060;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_230439262.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1629077 1629541 . - . ID=gene-LPH41_RS07065;Name=LPH41_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07065;old_locus_tag=LPH41_07065 NZ_CP087680.1 Protein Homology CDS 1629077 1629541 . - 0 ID=cds-WP_038272796.1;Parent=gene-LPH41_RS07065;Dbxref=Genbank:WP_038272796.1;Name=WP_038272796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895168.1;locus_tag=LPH41_RS07065;product=hypothetical protein;protein_id=WP_038272796.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1629698 1630276 . - . ID=gene-LPH41_RS07070;Name=LPH41_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07070;old_locus_tag=LPH41_07070 NZ_CP087680.1 Protein Homology CDS 1629698 1630276 . - 0 ID=cds-WP_038272794.1;Parent=gene-LPH41_RS07070;Dbxref=Genbank:WP_038272794.1;Name=WP_038272794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085600.1;locus_tag=LPH41_RS07070;product=DUF5625 family protein;protein_id=WP_038272794.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1630472 1630723 . - . ID=gene-LPH41_RS07075;Name=LPH41_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07075;old_locus_tag=LPH41_07075 NZ_CP087680.1 GeneMarkS-2+ CDS 1630472 1630723 . - 0 ID=cds-WP_230430685.1;Parent=gene-LPH41_RS07075;Dbxref=Genbank:WP_230430685.1;Name=WP_230430685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07075;product=hypothetical protein;protein_id=WP_230430685.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1630860 1631324 . - . ID=gene-LPH41_RS07080;Name=LPH41_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07080;old_locus_tag=LPH41_07080 NZ_CP087680.1 Protein Homology CDS 1630860 1631324 . - 0 ID=cds-WP_038272801.1;Parent=gene-LPH41_RS07080;Dbxref=Genbank:WP_038272801.1;Name=WP_038272801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895168.1;locus_tag=LPH41_RS07080;product=hypothetical protein;protein_id=WP_038272801.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1631488 1632358 . - . ID=gene-LPH41_RS07085;Name=LPH41_RS07085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS07085;old_locus_tag=LPH41_07085;pseudo=true NZ_CP087680.1 Protein Homology CDS 1631488 1632358 . - 0 ID=cds-LPH41_RS07085;Parent=gene-LPH41_RS07085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085602.1;locus_tag=LPH41_RS07085;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1632498 1633388 . - . ID=gene-LPH41_RS07090;Name=LPH41_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07090;old_locus_tag=LPH41_07090 NZ_CP087680.1 Protein Homology CDS 1632498 1633388 . - 0 ID=cds-WP_038272792.1;Parent=gene-LPH41_RS07090;Dbxref=Genbank:WP_038272792.1;Name=WP_038272792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085602.1;locus_tag=LPH41_RS07090;product=hypothetical protein;protein_id=WP_038272792.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1633391 1633633 . - . ID=gene-LPH41_RS07095;Name=LPH41_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07095;old_locus_tag=LPH41_07095 NZ_CP087680.1 GeneMarkS-2+ CDS 1633391 1633633 . - 0 ID=cds-WP_160165223.1;Parent=gene-LPH41_RS07095;Dbxref=Genbank:WP_160165223.1;Name=WP_160165223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07095;product=hypothetical protein;protein_id=WP_160165223.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1633775 1633930 . - . ID=gene-LPH41_RS07100;Name=LPH41_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07100;old_locus_tag=LPH41_07100 NZ_CP087680.1 GeneMarkS-2+ CDS 1633775 1633930 . - 0 ID=cds-WP_162814078.1;Parent=gene-LPH41_RS07100;Dbxref=Genbank:WP_162814078.1;Name=WP_162814078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07100;product=hypothetical protein;protein_id=WP_162814078.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1634014 1634163 . + . ID=gene-LPH41_RS07105;Name=LPH41_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07105;old_locus_tag=LPH41_07105 NZ_CP087680.1 GeneMarkS-2+ CDS 1634014 1634163 . + 0 ID=cds-WP_200866214.1;Parent=gene-LPH41_RS07105;Dbxref=Genbank:WP_200866214.1;Name=WP_200866214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07105;product=hypothetical protein;protein_id=WP_200866214.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1634232 1635734 . + . ID=gene-LPH41_RS07110;Name=LPH41_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07110;old_locus_tag=LPH41_07110 NZ_CP087680.1 Protein Homology CDS 1634232 1635734 . + 0 ID=cds-WP_038272787.1;Parent=gene-LPH41_RS07110;Dbxref=Genbank:WP_038272787.1;Name=WP_038272787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161167.1;locus_tag=LPH41_RS07110;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_038272787.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1635731 1637257 . + . ID=gene-LPH41_RS07115;Name=LPH41_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07115;old_locus_tag=LPH41_07115 NZ_CP087680.1 Protein Homology CDS 1635731 1637257 . + 0 ID=cds-WP_038272784.1;Parent=gene-LPH41_RS07115;Dbxref=Genbank:WP_038272784.1;Name=WP_038272784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161165.1;locus_tag=LPH41_RS07115;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_038272784.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1637250 1638404 . + . ID=gene-LPH41_RS07120;Name=LPH41_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07120;old_locus_tag=LPH41_07120 NZ_CP087680.1 Protein Homology CDS 1637250 1638404 . + 0 ID=cds-WP_081755486.1;Parent=gene-LPH41_RS07120;Dbxref=Genbank:WP_081755486.1;Name=WP_081755486.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LPH41_RS07120;product=restriction endonuclease subunit S;protein_id=WP_081755486.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1638407 1641397 . + . ID=gene-LPH41_RS07125;Name=LPH41_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07125;old_locus_tag=LPH41_07125 NZ_CP087680.1 Protein Homology CDS 1638407 1641397 . + 0 ID=cds-WP_038272782.1;Parent=gene-LPH41_RS07125;Dbxref=Genbank:WP_038272782.1;Name=WP_038272782.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161163.1;locus_tag=LPH41_RS07125;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_038272782.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1641557 1642042 . - . ID=gene-LPH41_RS07130;Name=LPH41_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07130;old_locus_tag=LPH41_07130 NZ_CP087680.1 GeneMarkS-2+ CDS 1641557 1642042 . - 0 ID=cds-WP_038272779.1;Parent=gene-LPH41_RS07130;Dbxref=Genbank:WP_038272779.1;Name=WP_038272779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07130;product=hypothetical protein;protein_id=WP_038272779.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1642236 1642544 . + . ID=gene-LPH41_RS07135;Name=LPH41_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07135;old_locus_tag=LPH41_07135 NZ_CP087680.1 GeneMarkS-2+ CDS 1642236 1642544 . + 0 ID=cds-WP_038272777.1;Parent=gene-LPH41_RS07135;Dbxref=Genbank:WP_038272777.1;Name=WP_038272777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07135;product=hypothetical protein;protein_id=WP_038272777.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1642552 1642689 . + . ID=gene-LPH41_RS07140;Name=LPH41_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07140;old_locus_tag=LPH41_07140 NZ_CP087680.1 GeneMarkS-2+ CDS 1642552 1642689 . + 0 ID=cds-WP_230428255.1;Parent=gene-LPH41_RS07140;Dbxref=Genbank:WP_230428255.1;Name=WP_230428255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07140;product=hypothetical protein;protein_id=WP_230428255.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1642686 1642835 . + . ID=gene-LPH41_RS07145;Name=LPH41_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07145;old_locus_tag=LPH41_07145 NZ_CP087680.1 Protein Homology CDS 1642686 1642835 . + 0 ID=cds-WP_230428254.1;Parent=gene-LPH41_RS07145;Dbxref=Genbank:WP_230428254.1;Name=WP_230428254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LPH41_RS07145;product=hypothetical protein;protein_id=WP_230428254.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1643001 1643813 . + . ID=gene-LPH41_RS07150;Name=LPH41_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07150;old_locus_tag=LPH41_07150 NZ_CP087680.1 Protein Homology CDS 1643001 1643813 . + 0 ID=cds-WP_038272775.1;Parent=gene-LPH41_RS07150;Dbxref=Genbank:WP_038272775.1;Name=WP_038272775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014899.2;locus_tag=LPH41_RS07150;product=class III extradiol ring-cleavage dioxygenase;protein_id=WP_038272775.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1643831 1644049 . - . ID=gene-LPH41_RS07155;Name=LPH41_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07155;old_locus_tag=LPH41_07155 NZ_CP087680.1 GeneMarkS-2+ CDS 1643831 1644049 . - 0 ID=cds-WP_038272773.1;Parent=gene-LPH41_RS07155;Dbxref=Genbank:WP_038272773.1;Name=WP_038272773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07155;product=hypothetical protein;protein_id=WP_038272773.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1644046 1644312 . - . ID=gene-LPH41_RS07160;Name=LPH41_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07160;old_locus_tag=LPH41_07160 NZ_CP087680.1 GeneMarkS-2+ CDS 1644046 1644312 . - 0 ID=cds-WP_152536660.1;Parent=gene-LPH41_RS07160;Dbxref=Genbank:WP_152536660.1;Name=WP_152536660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07160;product=hypothetical protein;protein_id=WP_152536660.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1644605 1644922 . + . ID=gene-LPH41_RS07165;Name=LPH41_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07165;old_locus_tag=LPH41_07165 NZ_CP087680.1 GeneMarkS-2+ CDS 1644605 1644922 . + 0 ID=cds-WP_160199317.1;Parent=gene-LPH41_RS07165;Dbxref=Genbank:WP_160199317.1;Name=WP_160199317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07165;product=hypothetical protein;protein_id=WP_160199317.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1645001 1645180 . + . ID=gene-LPH41_RS07170;Name=LPH41_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07170;old_locus_tag=LPH41_07170 NZ_CP087680.1 GeneMarkS-2+ CDS 1645001 1645180 . + 0 ID=cds-WP_038273245.1;Parent=gene-LPH41_RS07170;Dbxref=Genbank:WP_038273245.1;Name=WP_038273245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07170;product=hypothetical protein;protein_id=WP_038273245.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1645587 1646210 . - . ID=gene-LPH41_RS07175;Name=LPH41_RS07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS07175;old_locus_tag=LPH41_07175;pseudo=true NZ_CP087680.1 Protein Homology CDS 1645587 1646210 . - 0 ID=cds-LPH41_RS07175;Parent=gene-LPH41_RS07175;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021498.2;locus_tag=LPH41_RS07175;product=DUF2220 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1646638 1646865 . + . ID=gene-LPH41_RS07180;Name=LPH41_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07180;old_locus_tag=LPH41_07180 NZ_CP087680.1 GeneMarkS-2+ CDS 1646638 1646865 . + 0 ID=cds-WP_230439263.1;Parent=gene-LPH41_RS07180;Dbxref=Genbank:WP_230439263.1;Name=WP_230439263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07180;product=hypothetical protein;protein_id=WP_230439263.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1646862 1647029 . + . ID=gene-LPH41_RS07185;Name=LPH41_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07185;old_locus_tag=LPH41_07185 NZ_CP087680.1 GeneMarkS-2+ CDS 1646862 1647029 . + 0 ID=cds-WP_230439264.1;Parent=gene-LPH41_RS07185;Dbxref=Genbank:WP_230439264.1;Name=WP_230439264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07185;product=hypothetical protein;protein_id=WP_230439264.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1647064 1647270 . + . ID=gene-LPH41_RS07190;Name=LPH41_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07190;old_locus_tag=LPH41_07190 NZ_CP087680.1 GeneMarkS-2+ CDS 1647064 1647270 . + 0 ID=cds-WP_230439265.1;Parent=gene-LPH41_RS07190;Dbxref=Genbank:WP_230439265.1;Name=WP_230439265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07190;product=hypothetical protein;protein_id=WP_230439265.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1647468 1647674 . + . ID=gene-LPH41_RS07195;Name=LPH41_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07195;old_locus_tag=LPH41_07195 NZ_CP087680.1 GeneMarkS-2+ CDS 1647468 1647674 . + 0 ID=cds-WP_162814111.1;Parent=gene-LPH41_RS07195;Dbxref=Genbank:WP_162814111.1;Name=WP_162814111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07195;product=hypothetical protein;protein_id=WP_162814111.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1647671 1647877 . + . ID=gene-LPH41_RS07200;Name=LPH41_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07200;old_locus_tag=LPH41_07200 NZ_CP087680.1 GeneMarkS-2+ CDS 1647671 1647877 . + 0 ID=cds-WP_114867196.1;Parent=gene-LPH41_RS07200;Dbxref=Genbank:WP_114867196.1;Name=WP_114867196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07200;product=hypothetical protein;protein_id=WP_114867196.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1647874 1648197 . + . ID=gene-LPH41_RS07205;Name=LPH41_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07205;old_locus_tag=LPH41_07205 NZ_CP087680.1 GeneMarkS-2+ CDS 1647874 1648197 . + 0 ID=cds-WP_230439266.1;Parent=gene-LPH41_RS07205;Dbxref=Genbank:WP_230439266.1;Name=WP_230439266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07205;product=hypothetical protein;protein_id=WP_230439266.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1648115 1648510 . + . ID=gene-LPH41_RS07210;Name=LPH41_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07210;old_locus_tag=LPH41_07210 NZ_CP087680.1 GeneMarkS-2+ CDS 1648115 1648510 . + 0 ID=cds-WP_230439267.1;Parent=gene-LPH41_RS07210;Dbxref=Genbank:WP_230439267.1;Name=WP_230439267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07210;product=hypothetical protein;protein_id=WP_230439267.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1648519 1648716 . + . ID=gene-LPH41_RS07215;Name=LPH41_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07215;old_locus_tag=LPH41_07215 NZ_CP087680.1 GeneMarkS-2+ CDS 1648519 1648716 . + 0 ID=cds-WP_038272989.1;Parent=gene-LPH41_RS07215;Dbxref=Genbank:WP_038272989.1;Name=WP_038272989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07215;product=hypothetical protein;protein_id=WP_038272989.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1648738 1649064 . - . ID=gene-LPH41_RS07220;Name=LPH41_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07220;old_locus_tag=LPH41_07220 NZ_CP087680.1 GeneMarkS-2+ CDS 1648738 1649064 . - 0 ID=cds-WP_160165231.1;Parent=gene-LPH41_RS07220;Dbxref=Genbank:WP_160165231.1;Name=WP_160165231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07220;product=hypothetical protein;protein_id=WP_160165231.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1649109 1650689 . + . ID=gene-LPH41_RS07225;Name=LPH41_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07225;old_locus_tag=LPH41_07225 NZ_CP087680.1 Protein Homology CDS 1649109 1650689 . + 0 ID=cds-WP_038272985.1;Parent=gene-LPH41_RS07225;Dbxref=Genbank:WP_038272985.1;Name=WP_038272985.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852131.1;locus_tag=LPH41_RS07225;product=type I restriction-modification system subunit M;protein_id=WP_038272985.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1650686 1650931 . + . ID=gene-LPH41_RS07230;Name=LPH41_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07230;old_locus_tag=LPH41_07230 NZ_CP087680.1 GeneMarkS-2+ CDS 1650686 1650931 . + 0 ID=cds-WP_038272984.1;Parent=gene-LPH41_RS07230;Dbxref=Genbank:WP_038272984.1;Name=WP_038272984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07230;product=hypothetical protein;protein_id=WP_038272984.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1650934 1652106 . + . ID=gene-LPH41_RS07235;Name=LPH41_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07235;old_locus_tag=LPH41_07235 NZ_CP087680.1 Protein Homology CDS 1650934 1652106 . + 0 ID=cds-WP_038272982.1;Parent=gene-LPH41_RS07235;Dbxref=Genbank:WP_038272982.1;Name=WP_038272982.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895140.1;locus_tag=LPH41_RS07235;product=restriction endonuclease subunit S;protein_id=WP_038272982.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1652103 1655126 . + . ID=gene-LPH41_RS07240;Name=LPH41_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07240;old_locus_tag=LPH41_07240 NZ_CP087680.1 Protein Homology CDS 1652103 1655126 . + 0 ID=cds-WP_038272980.1;Parent=gene-LPH41_RS07240;Dbxref=Genbank:WP_038272980.1;Name=WP_038272980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085623.1;locus_tag=LPH41_RS07240;product=type I restriction endonuclease subunit R;protein_id=WP_038272980.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1655171 1655542 . + . ID=gene-LPH41_RS07245;Name=LPH41_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07245;old_locus_tag=LPH41_07245 NZ_CP087680.1 GeneMarkS-2+ CDS 1655171 1655542 . + 0 ID=cds-WP_200866219.1;Parent=gene-LPH41_RS07245;Dbxref=Genbank:WP_200866219.1;Name=WP_200866219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07245;product=hypothetical protein;protein_id=WP_200866219.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1656178 1656402 . + . ID=gene-LPH41_RS07250;Name=LPH41_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07250;old_locus_tag=LPH41_07250 NZ_CP087680.1 GeneMarkS-2+ CDS 1656178 1656402 . + 0 ID=cds-WP_152536668.1;Parent=gene-LPH41_RS07250;Dbxref=Genbank:WP_152536668.1;Name=WP_152536668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07250;product=hypothetical protein;protein_id=WP_152536668.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1656414 1657361 . + . ID=gene-LPH41_RS07255;Name=LPH41_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07255;old_locus_tag=LPH41_07255 NZ_CP087680.1 Protein Homology CDS 1656414 1657361 . + 0 ID=cds-WP_038272973.1;Parent=gene-LPH41_RS07255;Dbxref=Genbank:WP_038272973.1;Name=WP_038272973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087430.1;locus_tag=LPH41_RS07255;product=COG2958 family protein;protein_id=WP_038272973.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1657674 1657811 . + . ID=gene-LPH41_RS07260;Name=LPH41_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07260;old_locus_tag=LPH41_07260 NZ_CP087680.1 GeneMarkS-2+ CDS 1657674 1657811 . + 0 ID=cds-WP_160199320.1;Parent=gene-LPH41_RS07260;Dbxref=Genbank:WP_160199320.1;Name=WP_160199320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07260;product=hypothetical protein;protein_id=WP_160199320.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1657874 1658332 . + . ID=gene-LPH41_RS07265;Name=LPH41_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07265;old_locus_tag=LPH41_07265 NZ_CP087680.1 GeneMarkS-2+ CDS 1657874 1658332 . + 0 ID=cds-WP_152536667.1;Parent=gene-LPH41_RS07265;Dbxref=Genbank:WP_152536667.1;Name=WP_152536667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07265;product=hypothetical protein;protein_id=WP_152536667.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1658218 1659138 . + . ID=gene-LPH41_RS07270;Name=LPH41_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07270;old_locus_tag=LPH41_07270 NZ_CP087680.1 GeneMarkS-2+ CDS 1658218 1659138 . + 0 ID=cds-WP_160165228.1;Parent=gene-LPH41_RS07270;Dbxref=Genbank:WP_160165228.1;Name=WP_160165228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07270;product=hypothetical protein;protein_id=WP_160165228.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1659164 1659490 . - . ID=gene-LPH41_RS07275;Name=LPH41_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07275;old_locus_tag=LPH41_07275 NZ_CP087680.1 GeneMarkS-2+ CDS 1659164 1659490 . - 0 ID=cds-WP_201745751.1;Parent=gene-LPH41_RS07275;Dbxref=Genbank:WP_201745751.1;Name=WP_201745751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07275;product=hypothetical protein;protein_id=WP_201745751.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1660012 1661382 . + . ID=gene-LPH41_RS07280;Name=LPH41_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07280;old_locus_tag=LPH41_07280 NZ_CP087680.1 Protein Homology CDS 1660012 1661382 . + 0 ID=cds-WP_114867153.1;Parent=gene-LPH41_RS07280;Dbxref=Genbank:WP_114867153.1;Name=WP_114867153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LPH41_RS07280;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_114867153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1661342 1670845 . + . ID=gene-LPH41_RS07285;Name=LPH41_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07285;old_locus_tag=LPH41_07285 NZ_CP087680.1 Protein Homology CDS 1661342 1670845 . + 0 ID=cds-WP_230439268.1;Parent=gene-LPH41_RS07285;Dbxref=Genbank:WP_230439268.1;Name=WP_230439268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS07285;product=hemagglutinin repeat-containing protein;protein_id=WP_230439268.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1670857 1671234 . + . ID=gene-LPH41_RS07290;Name=LPH41_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07290;old_locus_tag=LPH41_07290 NZ_CP087680.1 Protein Homology CDS 1670857 1671234 . + 0 ID=cds-WP_230439269.1;Parent=gene-LPH41_RS07290;Dbxref=Genbank:WP_230439269.1;Name=WP_230439269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087391.1;locus_tag=LPH41_RS07290;product=DUF596 domain-containing protein;protein_id=WP_230439269.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1671314 1671667 . + . ID=gene-LPH41_RS07295;Name=LPH41_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07295;old_locus_tag=LPH41_07295 NZ_CP087680.1 Protein Homology CDS 1671314 1671667 . + 0 ID=cds-WP_230439270.1;Parent=gene-LPH41_RS07295;Dbxref=Genbank:WP_230439270.1;Name=WP_230439270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090789.1;locus_tag=LPH41_RS07295;product=DUF769 domain-containing protein;protein_id=WP_230439270.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1671679 1672068 . + . ID=gene-LPH41_RS07300;Name=LPH41_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07300;old_locus_tag=LPH41_07300 NZ_CP087680.1 Protein Homology CDS 1671679 1672068 . + 0 ID=cds-WP_038273210.1;Parent=gene-LPH41_RS07300;Dbxref=Genbank:WP_038273210.1;Name=WP_038273210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH41_RS07300;product=DUF596 domain-containing protein;protein_id=WP_038273210.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1672503 1673678 . + . ID=gene-LPH41_RS07305;Name=LPH41_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07305;old_locus_tag=LPH41_07305 NZ_CP087680.1 Protein Homology CDS 1672503 1673678 . + 0 ID=cds-WP_205395219.1;Parent=gene-LPH41_RS07305;Dbxref=Genbank:WP_205395219.1;Name=WP_205395219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH41_RS07305;product=DNA/RNA non-specific endonuclease;protein_id=WP_205395219.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1673675 1674097 . + . ID=gene-LPH41_RS07310;Name=LPH41_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07310;old_locus_tag=LPH41_07310 NZ_CP087680.1 GeneMarkS-2+ CDS 1673675 1674097 . + 0 ID=cds-WP_038271223.1;Parent=gene-LPH41_RS07310;Dbxref=Genbank:WP_038271223.1;Name=WP_038271223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07310;product=hypothetical protein;protein_id=WP_038271223.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1674162 1674491 . + . ID=gene-LPH41_RS07315;Name=LPH41_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07315;old_locus_tag=LPH41_07315 NZ_CP087680.1 Protein Homology CDS 1674162 1674491 . + 0 ID=cds-WP_038271224.1;Parent=gene-LPH41_RS07315;Dbxref=Genbank:WP_038271224.1;Name=WP_038271224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS07315;product=DUF769 domain-containing protein;protein_id=WP_038271224.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1674503 1674880 . + . ID=gene-LPH41_RS07320;Name=LPH41_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07320;old_locus_tag=LPH41_07320 NZ_CP087680.1 Protein Homology CDS 1674503 1674880 . + 0 ID=cds-WP_230439271.1;Parent=gene-LPH41_RS07320;Dbxref=Genbank:WP_230439271.1;Name=WP_230439271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098380.1;locus_tag=LPH41_RS07320;product=DUF596 domain-containing protein;protein_id=WP_230439271.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1674960 1675313 . + . ID=gene-LPH41_RS07325;Name=LPH41_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07325;old_locus_tag=LPH41_07325 NZ_CP087680.1 Protein Homology CDS 1674960 1675313 . + 0 ID=cds-WP_051482311.1;Parent=gene-LPH41_RS07325;Dbxref=Genbank:WP_051482311.1;Name=WP_051482311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090789.1;locus_tag=LPH41_RS07325;product=DUF769 domain-containing protein;protein_id=WP_051482311.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1675325 1675711 . + . ID=gene-LPH41_RS07330;Name=LPH41_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07330;old_locus_tag=LPH41_07330 NZ_CP087680.1 Protein Homology CDS 1675325 1675711 . + 0 ID=cds-WP_038271280.1;Parent=gene-LPH41_RS07330;Dbxref=Genbank:WP_038271280.1;Name=WP_038271280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086150.1;locus_tag=LPH41_RS07330;product=DUF596 domain-containing protein;protein_id=WP_038271280.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1675881 1676195 . + . ID=gene-LPH41_RS07335;Name=LPH41_RS07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07335;old_locus_tag=LPH41_07335 NZ_CP087680.1 GeneMarkS-2+ CDS 1675881 1676195 . + 0 ID=cds-WP_038271281.1;Parent=gene-LPH41_RS07335;Dbxref=Genbank:WP_038271281.1;Name=WP_038271281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07335;product=hypothetical protein;protein_id=WP_038271281.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1676192 1676725 . + . ID=gene-LPH41_RS07340;Name=LPH41_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07340;old_locus_tag=LPH41_07340 NZ_CP087680.1 GeneMarkS-2+ CDS 1676192 1676725 . + 0 ID=cds-WP_038271225.1;Parent=gene-LPH41_RS07340;Dbxref=Genbank:WP_038271225.1;Name=WP_038271225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07340;product=hypothetical protein;protein_id=WP_038271225.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1677098 1677450 . - . ID=gene-LPH41_RS07345;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LPH41_RS07345;old_locus_tag=LPH41_07345 NZ_CP087680.1 cmsearch tmRNA 1677098 1677450 . - . ID=rna-LPH41_RS07345;Parent=gene-LPH41_RS07345;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS07345;product=transfer-messenger RNA NZ_CP087680.1 cmsearch exon 1677098 1677450 . - . ID=exon-LPH41_RS07345-1;Parent=rna-LPH41_RS07345;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH41_RS07345;product=transfer-messenger RNA NZ_CP087680.1 RefSeq gene 1678364 1680211 . - . ID=gene-LPH41_RS07350;Name=LPH41_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07350;old_locus_tag=LPH41_07350 NZ_CP087680.1 Protein Homology CDS 1678364 1680211 . - 0 ID=cds-WP_038271227.1;Parent=gene-LPH41_RS07350;Dbxref=Genbank:WP_038271227.1;Name=WP_038271227.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338135.1;locus_tag=LPH41_RS07350;product=alpha-L-fucosidase;protein_id=WP_038271227.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1680305 1682911 . - . ID=gene-LPH41_RS07355;Name=LPH41_RS07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07355;old_locus_tag=LPH41_07355 NZ_CP087680.1 Protein Homology CDS 1680305 1682911 . - 0 ID=cds-WP_114867192.1;Parent=gene-LPH41_RS07355;Dbxref=Genbank:WP_114867192.1;Name=WP_114867192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164668.1;locus_tag=LPH41_RS07355;product=TonB-dependent receptor;protein_id=WP_114867192.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1684037 1684891 . - . ID=gene-LPH41_RS07360;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LPH41_RS07360;old_locus_tag=LPH41_07360 NZ_CP087680.1 Protein Homology CDS 1684037 1684891 . - 0 ID=cds-WP_038271228.1;Parent=gene-LPH41_RS07360;Dbxref=Genbank:WP_038271228.1;Name=WP_038271228.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087478.1;locus_tag=LPH41_RS07360;product=pyrroline-5-carboxylate reductase;protein_id=WP_038271228.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1685062 1685205 . + . ID=gene-LPH41_RS07365;Name=LPH41_RS07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07365;old_locus_tag=LPH41_07365 NZ_CP087680.1 GeneMarkS-2+ CDS 1685062 1685205 . + 0 ID=cds-WP_160165173.1;Parent=gene-LPH41_RS07365;Dbxref=Genbank:WP_160165173.1;Name=WP_160165173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07365;product=hypothetical protein;protein_id=WP_160165173.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1685827 1690296 . + . ID=gene-LPH41_RS07370;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=LPH41_RS07370;old_locus_tag=LPH41_07370 NZ_CP087680.1 Protein Homology CDS 1685827 1690296 . + 0 ID=cds-WP_038271229.1;Parent=gene-LPH41_RS07370;Dbxref=Genbank:WP_038271229.1;Name=WP_038271229.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087485.1;locus_tag=LPH41_RS07370;product=glutamate synthase large subunit;protein_id=WP_038271229.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1690435 1691919 . + . ID=gene-LPH41_RS07375;Name=LPH41_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07375;old_locus_tag=LPH41_07375 NZ_CP087680.1 Protein Homology CDS 1690435 1691919 . + 0 ID=cds-WP_038271230.1;Parent=gene-LPH41_RS07375;Dbxref=Genbank:WP_038271230.1;Name=WP_038271230.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098354.1;locus_tag=LPH41_RS07375;product=FAD-dependent oxidoreductase;protein_id=WP_038271230.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1692449 1692637 . - . ID=gene-LPH41_RS07380;Name=LPH41_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07380;old_locus_tag=LPH41_07380 NZ_CP087680.1 GeneMarkS-2+ CDS 1692449 1692637 . - 0 ID=cds-WP_152536615.1;Parent=gene-LPH41_RS07380;Dbxref=Genbank:WP_152536615.1;Name=WP_152536615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07380;product=hypothetical protein;protein_id=WP_152536615.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1692769 1692911 . - . ID=gene-LPH41_RS07385;Name=LPH41_RS07385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS07385;old_locus_tag=LPH41_07385;partial=true;pseudo=true;start_range=.,1692769 NZ_CP087680.1 Protein Homology CDS 1692769 1692911 . - 0 ID=cds-LPH41_RS07385;Parent=gene-LPH41_RS07385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LPH41_RS07385;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1692769;transl_table=11 NZ_CP087680.1 RefSeq gene 1693028 1693264 . - . ID=gene-LPH41_RS07390;Name=LPH41_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07390;old_locus_tag=LPH41_07390 NZ_CP087680.1 GeneMarkS-2+ CDS 1693028 1693264 . - 0 ID=cds-WP_230428251.1;Parent=gene-LPH41_RS07390;Dbxref=Genbank:WP_230428251.1;Name=WP_230428251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07390;product=hypothetical protein;protein_id=WP_230428251.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1694181 1695299 . - . ID=gene-LPH41_RS07395;Name=LPH41_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07395;old_locus_tag=LPH41_07395 NZ_CP087680.1 Protein Homology CDS 1694181 1695299 . - 0 ID=cds-WP_081755436.1;Parent=gene-LPH41_RS07395;Dbxref=Genbank:WP_081755436.1;Name=WP_081755436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853012.1;locus_tag=LPH41_RS07395;product=glycoside hydrolase family 5 protein;protein_id=WP_081755436.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1696590 1698311 . - . ID=gene-LPH41_RS07400;Name=LPH41_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07400;old_locus_tag=LPH41_07400 NZ_CP087680.1 Protein Homology CDS 1696590 1698311 . - 0 ID=cds-WP_038271233.1;Parent=gene-LPH41_RS07400;Dbxref=Genbank:WP_038271233.1;Name=WP_038271233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098351.1;locus_tag=LPH41_RS07400;product=M28 family peptidase;protein_id=WP_038271233.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1698509 1699819 . + . ID=gene-LPH41_RS07405;Name=LPH41_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07405;old_locus_tag=LPH41_07405 NZ_CP087680.1 Protein Homology CDS 1698509 1699819 . + 0 ID=cds-WP_038271283.1;Parent=gene-LPH41_RS07405;Dbxref=Genbank:WP_038271283.1;Name=WP_038271283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084799.1;locus_tag=LPH41_RS07405;product=murein hydrolase activator EnvC;protein_id=WP_038271283.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1699970 1701424 . + . ID=gene-LPH41_RS07410;Name=LPH41_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07410;old_locus_tag=LPH41_07410 NZ_CP087680.1 Protein Homology CDS 1699970 1701424 . + 0 ID=cds-WP_038271234.1;Parent=gene-LPH41_RS07410;Dbxref=Genbank:WP_038271234.1;Name=WP_038271234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084798.1;locus_tag=LPH41_RS07410;product=S41 family peptidase;protein_id=WP_038271234.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1704535 1705401 . - . ID=gene-LPH41_RS07415;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=LPH41_RS07415;old_locus_tag=LPH41_07415 NZ_CP087680.1 Protein Homology CDS 1704535 1705401 . - 0 ID=cds-WP_038271235.1;Parent=gene-LPH41_RS07415;Dbxref=Genbank:WP_038271235.1;Name=WP_038271235.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7c;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372412.1;locus_tag=LPH41_RS07415;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_038271235.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1705398 1707209 . - . ID=gene-LPH41_RS07420;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=LPH41_RS07420;old_locus_tag=LPH41_07420 NZ_CP087680.1 Protein Homology CDS 1705398 1707209 . - 0 ID=cds-WP_038271236.1;Parent=gene-LPH41_RS07420;Dbxref=Genbank:WP_038271236.1;Name=WP_038271236.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas8c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119023.1;locus_tag=LPH41_RS07420;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_038271236.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1707206 1707880 . - . ID=gene-LPH41_RS07425;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=LPH41_RS07425;old_locus_tag=LPH41_07425 NZ_CP087680.1 Protein Homology CDS 1707206 1707880 . - 0 ID=cds-WP_038271237.1;Parent=gene-LPH41_RS07425;Dbxref=Genbank:WP_038271237.1;Name=WP_038271237.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas5c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465423.1;locus_tag=LPH41_RS07425;product=type I-C CRISPR-associated protein Cas5c;protein_id=WP_038271237.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1709871 1712102 . + . ID=gene-LPH41_RS07430;Name=LPH41_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07430;old_locus_tag=LPH41_07430 NZ_CP087680.1 Protein Homology CDS 1709871 1712102 . + 0 ID=cds-WP_038271238.1;Parent=gene-LPH41_RS07430;Dbxref=Genbank:WP_038271238.1;Name=WP_038271238.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157024.1;locus_tag=LPH41_RS07430;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_038271238.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1713032 1714726 . - . ID=gene-LPH41_RS07435;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LPH41_RS07435;old_locus_tag=LPH41_07435 NZ_CP087680.1 Protein Homology CDS 1713032 1714726 . - 0 ID=cds-WP_038271239.1;Parent=gene-LPH41_RS07435;Dbxref=Genbank:WP_038271239.1;Name=WP_038271239.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008266970.1;locus_tag=LPH41_RS07435;product=transcription termination factor Rho;protein_id=WP_038271239.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1714934 1715275 . - . ID=gene-LPH41_RS07440;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LPH41_RS07440;old_locus_tag=LPH41_07440 NZ_CP087680.1 Protein Homology CDS 1714934 1715275 . - 0 ID=cds-WP_038271240.1;Parent=gene-LPH41_RS07440;Dbxref=Genbank:WP_038271240.1;Name=WP_038271240.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852709.1;locus_tag=LPH41_RS07440;product=thioredoxin;protein_id=WP_038271240.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1715473 1717125 . + . ID=gene-LPH41_RS07445;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=LPH41_RS07445;old_locus_tag=LPH41_07445 NZ_CP087680.1 Protein Homology CDS 1715473 1717125 . + 0 ID=cds-WP_038271241.1;Parent=gene-LPH41_RS07445;Dbxref=Genbank:WP_038271241.1;Name=WP_038271241.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337155.1;locus_tag=LPH41_RS07445;product=ATP-dependent RNA helicase RhlB;protein_id=WP_038271241.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1717199 1717885 . + . ID=gene-LPH41_RS07450;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LPH41_RS07450;old_locus_tag=LPH41_07450 NZ_CP087680.1 Protein Homology CDS 1717199 1717885 . + 0 ID=cds-WP_038271242.1;Parent=gene-LPH41_RS07450;Dbxref=Genbank:WP_038271242.1;Name=WP_038271242.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484499.1;locus_tag=LPH41_RS07450;product=cell division ATP-binding protein FtsE;protein_id=WP_038271242.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1717882 1718820 . + . ID=gene-LPH41_RS07455;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LPH41_RS07455;old_locus_tag=LPH41_07455 NZ_CP087680.1 Protein Homology CDS 1717882 1718820 . + 0 ID=cds-WP_038271243.1;Parent=gene-LPH41_RS07455;Dbxref=Genbank:WP_038271243.1;Name=WP_038271243.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484495.1;locus_tag=LPH41_RS07455;product=permease-like cell division protein FtsX;protein_id=WP_038271243.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1718835 1719683 . + . ID=gene-LPH41_RS07460;Name=LPH41_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07460;old_locus_tag=LPH41_07460 NZ_CP087680.1 Protein Homology CDS 1718835 1719683 . + 0 ID=cds-WP_038271244.1;Parent=gene-LPH41_RS07460;Dbxref=Genbank:WP_038271244.1;Name=WP_038271244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852754.1;locus_tag=LPH41_RS07460;product=response regulator;protein_id=WP_038271244.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1719689 1720429 . + . ID=gene-LPH41_RS07465;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LPH41_RS07465;old_locus_tag=LPH41_07465 NZ_CP087680.1 Protein Homology CDS 1719689 1720429 . + 0 ID=cds-WP_038271245.1;Parent=gene-LPH41_RS07465;Dbxref=Genbank:WP_038271245.1;Name=WP_038271245.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157034.1;locus_tag=LPH41_RS07465;product=uracil-DNA glycosylase;protein_id=WP_038271245.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1720573 1721439 . + . ID=gene-LPH41_RS07470;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LPH41_RS07470;old_locus_tag=LPH41_07470 NZ_CP087680.1 Protein Homology CDS 1720573 1721439 . + 0 ID=cds-WP_038271246.1;Parent=gene-LPH41_RS07470;Dbxref=Genbank:WP_038271246.1;Name=WP_038271246.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803651.1;locus_tag=LPH41_RS07470;product=RNA polymerase sigma factor RpoH;protein_id=WP_038271246.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1722379 1724571 . - . ID=gene-LPH41_RS07475;Name=LPH41_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07475;old_locus_tag=LPH41_07475 NZ_CP087680.1 Protein Homology CDS 1722379 1724571 . - 0 ID=cds-WP_038271247.1;Parent=gene-LPH41_RS07475;Dbxref=Genbank:WP_038271247.1;Name=WP_038271247.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167545.1;locus_tag=LPH41_RS07475;product=primosomal protein N';protein_id=WP_038271247.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1725009 1725968 . + . ID=gene-LPH41_RS07480;Name=LPH41_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07480;old_locus_tag=LPH41_07480 NZ_CP087680.1 Protein Homology CDS 1725009 1725968 . + 0 ID=cds-WP_038271248.1;Parent=gene-LPH41_RS07480;Dbxref=Genbank:WP_038271248.1;Name=WP_038271248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087429.1;locus_tag=LPH41_RS07480;product=hypothetical protein;protein_id=WP_038271248.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1726064 1726534 . + . ID=gene-LPH41_RS07485;Name=LPH41_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07485;old_locus_tag=LPH41_07485 NZ_CP087680.1 Protein Homology CDS 1726064 1726534 . + 0 ID=cds-WP_230428250.1;Parent=gene-LPH41_RS07485;Dbxref=Genbank:WP_230428250.1;Name=WP_230428250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895101.1;locus_tag=LPH41_RS07485;product=DUF3106 domain-containing protein;protein_id=WP_230428250.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1726893 1728254 . + . ID=gene-LPH41_RS07490;Name=LPH41_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07490;old_locus_tag=LPH41_07490 NZ_CP087680.1 Protein Homology CDS 1726893 1728254 . + 0 ID=cds-WP_038271250.1;Parent=gene-LPH41_RS07490;Dbxref=Genbank:WP_038271250.1;Name=WP_038271250.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087427.1;locus_tag=LPH41_RS07490;product=MATE family efflux transporter;protein_id=WP_038271250.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1728338 1730239 . + . ID=gene-LPH41_RS07495;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LPH41_RS07495;old_locus_tag=LPH41_07495 NZ_CP087680.1 Protein Homology CDS 1728338 1730239 . + 0 ID=cds-WP_038271251.1;Parent=gene-LPH41_RS07495;Dbxref=Genbank:WP_038271251.1;Name=WP_038271251.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087426.1;locus_tag=LPH41_RS07495;product=signal peptide peptidase SppA;protein_id=WP_038271251.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1731180 1732787 . + . ID=gene-LPH41_RS07500;Name=LPH41_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07500;old_locus_tag=LPH41_07500 NZ_CP087680.1 Protein Homology CDS 1731180 1732787 . + 0 ID=cds-WP_038271252.1;Parent=gene-LPH41_RS07500;Dbxref=Genbank:WP_038271252.1;Name=WP_038271252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091511.1;locus_tag=LPH41_RS07500;product=glucan biosynthesis protein;protein_id=WP_038271252.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1733000 1733212 . - . ID=gene-LPH41_RS07505;Name=LPH41_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07505;old_locus_tag=LPH41_07505 NZ_CP087680.1 GeneMarkS-2+ CDS 1733000 1733212 . - 0 ID=cds-WP_152536616.1;Parent=gene-LPH41_RS07505;Dbxref=Genbank:WP_152536616.1;Name=WP_152536616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07505;product=hypothetical protein;protein_id=WP_152536616.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1733722 1735698 . + . ID=gene-LPH41_RS07510;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=LPH41_RS07510;old_locus_tag=LPH41_07510 NZ_CP087680.1 Protein Homology CDS 1733722 1735698 . + 0 ID=cds-WP_038271284.1;Parent=gene-LPH41_RS07510;Dbxref=Genbank:WP_038271284.1;Name=WP_038271284.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091509.1;locus_tag=LPH41_RS07510;product=DNA helicase Rep;protein_id=WP_038271284.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1737680 1739053 . + . ID=gene-LPH41_RS07515;Name=LPH41_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07515;old_locus_tag=LPH41_07515 NZ_CP087680.1 Protein Homology CDS 1737680 1739053 . + 0 ID=cds-WP_038271253.1;Parent=gene-LPH41_RS07515;Dbxref=Genbank:WP_038271253.1;Name=WP_038271253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895093.1;locus_tag=LPH41_RS07515;product=virulence factor family protein;protein_id=WP_038271253.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1740966 1743200 . + . ID=gene-LPH41_RS07520;Name=LPH41_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07520;old_locus_tag=LPH41_07520 NZ_CP087680.1 Protein Homology CDS 1740966 1743200 . + 0 ID=cds-WP_230428249.1;Parent=gene-LPH41_RS07520;Dbxref=Genbank:WP_230428249.1;Name=WP_230428249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087420.1;locus_tag=LPH41_RS07520;product=multicopper oxidase family protein;protein_id=WP_230428249.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1744441 1744728 . - . ID=gene-LPH41_RS07525;Name=LPH41_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07525;old_locus_tag=LPH41_07525 NZ_CP087680.1 GeneMarkS-2+ CDS 1744441 1744728 . - 0 ID=cds-WP_051482314.1;Parent=gene-LPH41_RS07525;Dbxref=Genbank:WP_051482314.1;Name=WP_051482314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07525;product=hypothetical protein;protein_id=WP_051482314.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1745554 1746622 . - . ID=gene-LPH41_RS07530;Name=LPH41_RS07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS07530;old_locus_tag=LPH41_07530;pseudo=true NZ_CP087680.1 Protein Homology CDS 1745554 1746622 . - 0 ID=cds-LPH41_RS07530;Parent=gene-LPH41_RS07530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895089.1;locus_tag=LPH41_RS07530;product=DUF2272 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1747384 1747653 . - . ID=gene-LPH41_RS07535;Name=LPH41_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07535;old_locus_tag=LPH41_07535 NZ_CP087680.1 Protein Homology CDS 1747384 1747653 . - 0 ID=cds-WP_038271254.1;Parent=gene-LPH41_RS07535;Dbxref=Genbank:WP_038271254.1;Name=WP_038271254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570984.1;locus_tag=LPH41_RS07535;product=Trm112 family protein;protein_id=WP_038271254.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1747716 1748219 . + . ID=gene-LPH41_RS07540;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LPH41_RS07540;old_locus_tag=LPH41_07540 NZ_CP087680.1 Protein Homology CDS 1747716 1748219 . + 0 ID=cds-WP_038271255.1;Parent=gene-LPH41_RS07540;Dbxref=Genbank:WP_038271255.1;Name=WP_038271255.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468225.1;locus_tag=LPH41_RS07540;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_038271255.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1748216 1749400 . + . ID=gene-LPH41_RS07545;Name=LPH41_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07545;old_locus_tag=LPH41_07545 NZ_CP087680.1 Protein Homology CDS 1748216 1749400 . + 0 ID=cds-WP_038271256.1;Parent=gene-LPH41_RS07545;Dbxref=Genbank:WP_038271256.1;Name=WP_038271256.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852058.1;locus_tag=LPH41_RS07545;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_038271256.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1750097 1750417 . + . ID=gene-LPH41_RS07550;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LPH41_RS07550;old_locus_tag=LPH41_07550 NZ_CP087680.1 Protein Homology CDS 1750097 1750417 . + 0 ID=cds-WP_038271257.1;Parent=gene-LPH41_RS07550;Dbxref=Genbank:WP_038271257.1;Name=WP_038271257.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485599.1;locus_tag=LPH41_RS07550;product=Grx4 family monothiol glutaredoxin;protein_id=WP_038271257.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1751081 1751677 . + . ID=gene-LPH41_RS07555;Name=LPH41_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07555;old_locus_tag=LPH41_07555 NZ_CP087680.1 Protein Homology CDS 1751081 1751677 . + 0 ID=cds-WP_038271287.1;Parent=gene-LPH41_RS07555;Dbxref=Genbank:WP_038271287.1;Name=WP_038271287.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895080.1;locus_tag=LPH41_RS07555;product=YhgN family NAAT transporter;protein_id=WP_038271287.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1752380 1752622 . + . ID=gene-LPH41_RS07560;Name=LPH41_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07560;old_locus_tag=LPH41_07560 NZ_CP087680.1 Protein Homology CDS 1752380 1752622 . + 0 ID=cds-WP_051482315.1;Parent=gene-LPH41_RS07560;Dbxref=Genbank:WP_051482315.1;Name=WP_051482315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=LPH41_RS07560;product=AAA family ATPase;protein_id=WP_051482315.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1752927 1753226 . + . ID=gene-LPH41_RS07565;Name=LPH41_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07565;old_locus_tag=LPH41_07565 NZ_CP087680.1 Protein Homology CDS 1752927 1753226 . + 0 ID=cds-WP_230428301.1;Parent=gene-LPH41_RS07565;Dbxref=Genbank:WP_230428301.1;Name=WP_230428301.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=LPH41_RS07565;product=UvrD-helicase domain-containing protein;protein_id=WP_230428301.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1753213 1753878 . - . ID=gene-LPH41_RS07570;Name=LPH41_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07570;old_locus_tag=LPH41_07570 NZ_CP087680.1 Protein Homology CDS 1753213 1753878 . - 0 ID=cds-WP_038271259.1;Parent=gene-LPH41_RS07570;Dbxref=Genbank:WP_038271259.1;Name=WP_038271259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LPH41_RS07570;product=amino acid ABC transporter permease;protein_id=WP_038271259.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1753885 1754604 . - . ID=gene-LPH41_RS07575;Name=LPH41_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07575;old_locus_tag=LPH41_07575 NZ_CP087680.1 Protein Homology CDS 1753885 1754604 . - 0 ID=cds-WP_038271260.1;Parent=gene-LPH41_RS07575;Dbxref=Genbank:WP_038271260.1;Name=WP_038271260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LPH41_RS07575;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_038271260.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1754582 1755277 . - . ID=gene-LPH41_RS07580;Name=LPH41_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07580;old_locus_tag=LPH41_07580 NZ_CP087680.1 Protein Homology CDS 1754582 1755277 . - 0 ID=cds-WP_038271261.1;Parent=gene-LPH41_RS07580;Dbxref=Genbank:WP_038271261.1;Name=WP_038271261.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LPH41_RS07580;product=amino acid ABC transporter permease;protein_id=WP_038271261.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1755303 1756061 . - . ID=gene-LPH41_RS07585;Name=LPH41_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07585;old_locus_tag=LPH41_07585 NZ_CP087680.1 Protein Homology CDS 1755303 1756061 . - 0 ID=cds-WP_038271262.1;Parent=gene-LPH41_RS07585;Dbxref=Genbank:WP_038271262.1;Name=WP_038271262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LPH41_RS07585;product=transporter substrate-binding domain-containing protein;protein_id=WP_038271262.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1756527 1756900 . - . ID=gene-LPH41_RS07590;Name=LPH41_RS07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS07590;old_locus_tag=LPH41_07590;partial=true;pseudo=true;start_range=.,1756527 NZ_CP087680.1 Protein Homology CDS 1756527 1756900 . - 0 ID=cds-LPH41_RS07590;Parent=gene-LPH41_RS07590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1;locus_tag=LPH41_RS07590;partial=true;product=recombinase family protein;pseudo=true;start_range=.,1756527;transl_table=11 NZ_CP087680.1 RefSeq gene 1756919 1757140 . - . ID=gene-LPH41_RS07595;Name=LPH41_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07595;old_locus_tag=LPH41_07595 NZ_CP087680.1 GeneMarkS-2+ CDS 1756919 1757140 . - 0 ID=cds-WP_152536617.1;Parent=gene-LPH41_RS07595;Dbxref=Genbank:WP_152536617.1;Name=WP_152536617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07595;product=hypothetical protein;protein_id=WP_152536617.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1757302 1759152 . - . ID=gene-LPH41_RS07600;Name=LPH41_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07600;old_locus_tag=LPH41_07600 NZ_CP087680.1 Protein Homology CDS 1757302 1759152 . - 0 ID=cds-WP_038271265.1;Parent=gene-LPH41_RS07600;Dbxref=Genbank:WP_038271265.1;Name=WP_038271265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=LPH41_RS07600;product=ATP-binding protein;protein_id=WP_038271265.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1759753 1760052 . - . ID=gene-LPH41_RS07605;Name=LPH41_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07605;old_locus_tag=LPH41_07605 NZ_CP087680.1 GeneMarkS-2+ CDS 1759753 1760052 . - 0 ID=cds-WP_051482316.1;Parent=gene-LPH41_RS07605;Dbxref=Genbank:WP_051482316.1;Name=WP_051482316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07605;product=hypothetical protein;protein_id=WP_051482316.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1760116 1760325 . - . ID=gene-LPH41_RS07610;Name=LPH41_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07610;old_locus_tag=LPH41_07610 NZ_CP087680.1 GeneMarkS-2+ CDS 1760116 1760325 . - 0 ID=cds-WP_038271266.1;Parent=gene-LPH41_RS07610;Dbxref=Genbank:WP_038271266.1;Name=WP_038271266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07610;product=hypothetical protein;protein_id=WP_038271266.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1760398 1760610 . + . ID=gene-LPH41_RS07615;Name=LPH41_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07615;old_locus_tag=LPH41_07615 NZ_CP087680.1 GeneMarkS-2+ CDS 1760398 1760610 . + 0 ID=cds-WP_152536618.1;Parent=gene-LPH41_RS07615;Dbxref=Genbank:WP_152536618.1;Name=WP_152536618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07615;product=hypothetical protein;protein_id=WP_152536618.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1760611 1760763 . + . ID=gene-LPH41_RS07620;Name=LPH41_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07620;old_locus_tag=LPH41_07620 NZ_CP087680.1 GeneMarkS-2+ CDS 1760611 1760763 . + 0 ID=cds-WP_160165175.1;Parent=gene-LPH41_RS07620;Dbxref=Genbank:WP_160165175.1;Name=WP_160165175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07620;product=hypothetical protein;protein_id=WP_160165175.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1760963 1761160 . - . ID=gene-LPH41_RS07625;Name=LPH41_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07625;old_locus_tag=LPH41_07625 NZ_CP087680.1 GeneMarkS-2+ CDS 1760963 1761160 . - 0 ID=cds-WP_038271268.1;Parent=gene-LPH41_RS07625;Dbxref=Genbank:WP_038271268.1;Name=WP_038271268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07625;product=hypothetical protein;protein_id=WP_038271268.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1761223 1761441 . - . ID=gene-LPH41_RS07630;Name=LPH41_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07630;old_locus_tag=LPH41_07630 NZ_CP087680.1 GeneMarkS-2+ CDS 1761223 1761441 . - 0 ID=cds-WP_162814107.1;Parent=gene-LPH41_RS07630;Dbxref=Genbank:WP_162814107.1;Name=WP_162814107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07630;product=hypothetical protein;protein_id=WP_162814107.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1762299 1762457 . + . ID=gene-LPH41_RS07635;Name=LPH41_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07635;old_locus_tag=LPH41_07635 NZ_CP087680.1 GeneMarkS-2+ CDS 1762299 1762457 . + 0 ID=cds-WP_160165177.1;Parent=gene-LPH41_RS07635;Dbxref=Genbank:WP_160165177.1;Name=WP_160165177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07635;product=hypothetical protein;protein_id=WP_160165177.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1762577 1763146 . - . ID=gene-LPH41_RS07640;Name=LPH41_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07640;old_locus_tag=LPH41_07640 NZ_CP087680.1 Protein Homology CDS 1762577 1763146 . - 0 ID=cds-WP_038271269.1;Parent=gene-LPH41_RS07640;Dbxref=Genbank:WP_038271269.1;Name=WP_038271269.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084727.1;locus_tag=LPH41_RS07640;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_038271269.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1763540 1764067 . + . ID=gene-LPH41_RS07645;Name=LPH41_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07645;old_locus_tag=LPH41_07645 NZ_CP087680.1 Protein Homology CDS 1763540 1764067 . + 0 ID=cds-WP_038271270.1;Parent=gene-LPH41_RS07645;Dbxref=Genbank:WP_038271270.1;Name=WP_038271270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966252.1;locus_tag=LPH41_RS07645;product=alpha/beta hydrolase;protein_id=WP_038271270.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1764467 1764601 . + . ID=gene-LPH41_RS12025;Name=LPH41_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12025 NZ_CP087680.1 GeneMarkS-2+ CDS 1764467 1764601 . + 0 ID=cds-WP_267903162.1;Parent=gene-LPH41_RS12025;Dbxref=Genbank:WP_267903162.1;Name=WP_267903162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12025;product=hypothetical protein;protein_id=WP_267903162.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1764933 1767107 . + . ID=gene-LPH41_RS07650;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LPH41_RS07650;old_locus_tag=LPH41_07650 NZ_CP087680.1 Protein Homology CDS 1764933 1767107 . + 0 ID=cds-WP_114867227.1;Parent=gene-LPH41_RS07650;Dbxref=Genbank:WP_114867227.1;Name=WP_114867227.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852069.1;locus_tag=LPH41_RS07650;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_114867227.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1767840 1767971 . - . ID=gene-LPH41_RS12030;Name=LPH41_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12030 NZ_CP087680.1 GeneMarkS-2+ CDS 1767840 1767971 . - 0 ID=cds-WP_267903160.1;Parent=gene-LPH41_RS12030;Dbxref=Genbank:WP_267903160.1;Name=WP_267903160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12030;product=hypothetical protein;protein_id=WP_267903160.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1768714 1768920 . + . ID=gene-LPH41_RS07655;Name=LPH41_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07655;old_locus_tag=LPH41_07655 NZ_CP087680.1 GeneMarkS-2+ CDS 1768714 1768920 . + 0 ID=cds-WP_152536621.1;Parent=gene-LPH41_RS07655;Dbxref=Genbank:WP_152536621.1;Name=WP_152536621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07655;product=hypothetical protein;protein_id=WP_152536621.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1769779 1770864 . - . ID=gene-LPH41_RS07660;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LPH41_RS07660;old_locus_tag=LPH41_07660 NZ_CP087680.1 Protein Homology CDS 1769779 1770864 . - 0 ID=cds-WP_038271274.1;Parent=gene-LPH41_RS07660;Dbxref=Genbank:WP_038271274.1;Name=WP_038271274.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300176.1;locus_tag=LPH41_RS07660;product=peptide chain release factor 1;protein_id=WP_038271274.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1770842 1772140 . - . ID=gene-LPH41_RS07665;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LPH41_RS07665;old_locus_tag=LPH41_07665 NZ_CP087680.1 Protein Homology CDS 1770842 1772140 . - 0 ID=cds-WP_038271288.1;Parent=gene-LPH41_RS07665;Dbxref=Genbank:WP_038271288.1;Name=WP_038271288.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852071.1;locus_tag=LPH41_RS07665;product=glutamyl-tRNA reductase;protein_id=WP_038271288.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1772207 1773886 . + . ID=gene-LPH41_RS07670;Name=LPH41_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07670;old_locus_tag=LPH41_07670 NZ_CP087680.1 Protein Homology CDS 1772207 1773886 . + 0 ID=cds-WP_038271275.1;Parent=gene-LPH41_RS07670;Dbxref=Genbank:WP_038271275.1;Name=WP_038271275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972526.1;locus_tag=LPH41_RS07670;product=membrane protein;protein_id=WP_038271275.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1773883 1774533 . + . ID=gene-LPH41_RS07675;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LPH41_RS07675;old_locus_tag=LPH41_07675 NZ_CP087680.1 Protein Homology CDS 1773883 1774533 . + 0 ID=cds-WP_160199309.1;Parent=gene-LPH41_RS07675;Dbxref=Genbank:WP_160199309.1;Name=WP_160199309.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087398.1;locus_tag=LPH41_RS07675;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_160199309.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1774530 1775408 . + . ID=gene-LPH41_RS07680;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LPH41_RS07680;old_locus_tag=LPH41_07680 NZ_CP087680.1 Protein Homology CDS 1774530 1775408 . + 0 ID=cds-WP_114867187.1;Parent=gene-LPH41_RS07680;Dbxref=Genbank:WP_114867187.1;Name=WP_114867187.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084712.1;locus_tag=LPH41_RS07680;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_114867187.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1775412 1775488 . + . ID=gene-LPH41_RS07685;Name=LPH41_RS07685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07685;old_locus_tag=LPH41_07685 NZ_CP087680.1 tRNAscan-SE tRNA 1775412 1775488 . + . ID=rna-LPH41_RS07685;Parent=gene-LPH41_RS07685;anticodon=(pos:1775446..1775448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07685;product=tRNA-Gln NZ_CP087680.1 tRNAscan-SE exon 1775412 1775488 . + . ID=exon-LPH41_RS07685-1;Parent=rna-LPH41_RS07685;anticodon=(pos:1775446..1775448);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07685;product=tRNA-Gln NZ_CP087680.1 RefSeq gene 1775619 1776578 . + . ID=gene-LPH41_RS07690;Name=LPH41_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07690;old_locus_tag=LPH41_07690 NZ_CP087680.1 Protein Homology CDS 1775619 1776578 . + 0 ID=cds-WP_038271290.1;Parent=gene-LPH41_RS07690;Dbxref=Genbank:WP_038271290.1;Name=WP_038271290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486761.1;locus_tag=LPH41_RS07690;product=ribose-phosphate diphosphokinase;protein_id=WP_038271290.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1776684 1777307 . + . ID=gene-LPH41_RS07695;Name=LPH41_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07695;old_locus_tag=LPH41_07695 NZ_CP087680.1 Protein Homology CDS 1776684 1777307 . + 0 ID=cds-WP_038271276.1;Parent=gene-LPH41_RS07695;Dbxref=Genbank:WP_038271276.1;Name=WP_038271276.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087395.1;locus_tag=LPH41_RS07695;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_038271276.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1777363 1777941 . + . ID=gene-LPH41_RS07700;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LPH41_RS07700;old_locus_tag=LPH41_07700 NZ_CP087680.1 Protein Homology CDS 1777363 1777941 . + 0 ID=cds-WP_038271277.1;Parent=gene-LPH41_RS07700;Dbxref=Genbank:WP_038271277.1;Name=WP_038271277.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084699.1;locus_tag=LPH41_RS07700;product=aminoacyl-tRNA hydrolase;protein_id=WP_038271277.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1777996 1779087 . + . ID=gene-LPH41_RS07705;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LPH41_RS07705;old_locus_tag=LPH41_07705 NZ_CP087680.1 Protein Homology CDS 1777996 1779087 . + 0 ID=cds-WP_038271278.1;Parent=gene-LPH41_RS07705;Dbxref=Genbank:WP_038271278.1;Name=WP_038271278.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506572.1;locus_tag=LPH41_RS07705;product=redox-regulated ATPase YchF;protein_id=WP_038271278.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1779281 1779367 . + . ID=gene-LPH41_RS07710;Name=LPH41_RS07710;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07710;old_locus_tag=LPH41_07710 NZ_CP087680.1 tRNAscan-SE tRNA 1779281 1779367 . + . ID=rna-LPH41_RS07710;Parent=gene-LPH41_RS07710;anticodon=(pos:1779315..1779317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07710;product=tRNA-Tyr NZ_CP087680.1 tRNAscan-SE exon 1779281 1779367 . + . ID=exon-LPH41_RS07710-1;Parent=rna-LPH41_RS07710;anticodon=(pos:1779315..1779317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07710;product=tRNA-Tyr NZ_CP087680.1 RefSeq gene 1779402 1779475 . + . ID=gene-LPH41_RS07715;Name=LPH41_RS07715;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07715;old_locus_tag=LPH41_07715 NZ_CP087680.1 tRNAscan-SE tRNA 1779402 1779475 . + . ID=rna-LPH41_RS07715;Parent=gene-LPH41_RS07715;anticodon=(pos:1779434..1779436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07715;product=tRNA-Gly NZ_CP087680.1 tRNAscan-SE exon 1779402 1779475 . + . ID=exon-LPH41_RS07715-1;Parent=rna-LPH41_RS07715;anticodon=(pos:1779434..1779436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07715;product=tRNA-Gly NZ_CP087680.1 RefSeq gene 1779510 1779585 . + . ID=gene-LPH41_RS07720;Name=LPH41_RS07720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07720;old_locus_tag=LPH41_07720 NZ_CP087680.1 tRNAscan-SE tRNA 1779510 1779585 . + . ID=rna-LPH41_RS07720;Parent=gene-LPH41_RS07720;anticodon=(pos:1779543..1779545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07720;product=tRNA-Thr NZ_CP087680.1 tRNAscan-SE exon 1779510 1779585 . + . ID=exon-LPH41_RS07720-1;Parent=rna-LPH41_RS07720;anticodon=(pos:1779543..1779545);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07720;product=tRNA-Thr NZ_CP087680.1 RefSeq gene 1779626 1780816 . + . ID=gene-LPH41_RS07725;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LPH41_RS07725;old_locus_tag=LPH41_07725 NZ_CP087680.1 Protein Homology CDS 1779626 1780816 . + 0 ID=cds-WP_038273292.1;Parent=gene-LPH41_RS07725;Dbxref=Genbank:WP_038273292.1;Name=WP_038273292.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=LPH41_RS07725;product=elongation factor Tu;protein_id=WP_038273292.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1780929 1781004 . + . ID=gene-LPH41_RS07730;Name=LPH41_RS07730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07730;old_locus_tag=LPH41_07730 NZ_CP087680.1 tRNAscan-SE tRNA 1780929 1781004 . + . ID=rna-LPH41_RS07730;Parent=gene-LPH41_RS07730;anticodon=(pos:1780962..1780964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07730;product=tRNA-Trp NZ_CP087680.1 tRNAscan-SE exon 1780929 1781004 . + . ID=exon-LPH41_RS07730-1;Parent=rna-LPH41_RS07730;anticodon=(pos:1780962..1780964);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07730;product=tRNA-Trp NZ_CP087680.1 RefSeq gene 1781054 1781461 . + . ID=gene-LPH41_RS07735;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LPH41_RS07735;old_locus_tag=LPH41_07735 NZ_CP087680.1 Protein Homology CDS 1781054 1781461 . + 0 ID=cds-WP_038272892.1;Parent=gene-LPH41_RS07735;Dbxref=Genbank:WP_038272892.1;Name=WP_038272892.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993330.1;locus_tag=LPH41_RS07735;product=preprotein translocase subunit SecE;protein_id=WP_038272892.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1781475 1782032 . + . ID=gene-LPH41_RS07740;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LPH41_RS07740;old_locus_tag=LPH41_07740 NZ_CP087680.1 Protein Homology CDS 1781475 1782032 . + 0 ID=cds-WP_038272890.1;Parent=gene-LPH41_RS07740;Dbxref=Genbank:WP_038272890.1;Name=WP_038272890.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090734.1;locus_tag=LPH41_RS07740;product=transcription termination/antitermination protein NusG;protein_id=WP_038272890.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1782232 1782660 . + . ID=gene-LPH41_RS07745;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LPH41_RS07745;old_locus_tag=LPH41_07745 NZ_CP087680.1 Protein Homology CDS 1782232 1782660 . + 0 ID=cds-WP_038272888.1;Parent=gene-LPH41_RS07745;Dbxref=Genbank:WP_038272888.1;Name=WP_038272888.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993334.1;locus_tag=LPH41_RS07745;product=50S ribosomal protein L11;protein_id=WP_038272888.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1782664 1783362 . + . ID=gene-LPH41_RS07750;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LPH41_RS07750;old_locus_tag=LPH41_07750 NZ_CP087680.1 Protein Homology CDS 1782664 1783362 . + 0 ID=cds-WP_038272885.1;Parent=gene-LPH41_RS07750;Dbxref=Genbank:WP_038272885.1;Name=WP_038272885.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341341.1;locus_tag=LPH41_RS07750;product=50S ribosomal protein L1;protein_id=WP_038272885.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1783864 1784391 . + . ID=gene-LPH41_RS07755;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LPH41_RS07755;old_locus_tag=LPH41_07755 NZ_CP087680.1 Protein Homology CDS 1783864 1784391 . + 0 ID=cds-WP_038272883.1;Parent=gene-LPH41_RS07755;Dbxref=Genbank:WP_038272883.1;Name=WP_038272883.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036116.1;locus_tag=LPH41_RS07755;product=50S ribosomal protein L10;protein_id=WP_038272883.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1784446 1784814 . + . ID=gene-LPH41_RS07760;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LPH41_RS07760;old_locus_tag=LPH41_07760 NZ_CP087680.1 Protein Homology CDS 1784446 1784814 . + 0 ID=cds-WP_038272881.1;Parent=gene-LPH41_RS07760;Dbxref=Genbank:WP_038272881.1;Name=WP_038272881.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084690.1;locus_tag=LPH41_RS07760;product=50S ribosomal protein L7/L12;protein_id=WP_038272881.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1785070 1789224 . + . ID=gene-LPH41_RS07765;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LPH41_RS07765;old_locus_tag=LPH41_07765 NZ_CP087680.1 Protein Homology CDS 1785070 1789224 . + 0 ID=cds-WP_038272880.1;Parent=gene-LPH41_RS07765;Dbxref=Genbank:WP_038272880.1;Name=WP_038272880.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852081.1;locus_tag=LPH41_RS07765;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_038272880.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1789331 1793554 . + . ID=gene-LPH41_RS07770;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LPH41_RS07770;old_locus_tag=LPH41_07770 NZ_CP087680.1 Protein Homology CDS 1789331 1793554 . + 0 ID=cds-WP_230439272.1;Parent=gene-LPH41_RS07770;Dbxref=Genbank:WP_230439272.1;Name=WP_230439272.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337137.1;locus_tag=LPH41_RS07770;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_230439272.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1793799 1794173 . + . ID=gene-LPH41_RS07775;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LPH41_RS07775;old_locus_tag=LPH41_07775 NZ_CP087680.1 Protein Homology CDS 1793799 1794173 . + 0 ID=cds-WP_038272877.1;Parent=gene-LPH41_RS07775;Dbxref=Genbank:WP_038272877.1;Name=WP_038272877.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469157.1;locus_tag=LPH41_RS07775;product=30S ribosomal protein S12;protein_id=WP_038272877.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1794189 1794656 . + . ID=gene-LPH41_RS07780;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LPH41_RS07780;old_locus_tag=LPH41_07780 NZ_CP087680.1 Protein Homology CDS 1794189 1794656 . + 0 ID=cds-WP_038272876.1;Parent=gene-LPH41_RS07780;Dbxref=Genbank:WP_038272876.1;Name=WP_038272876.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450629.1;locus_tag=LPH41_RS07780;product=30S ribosomal protein S7;protein_id=WP_038272876.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1794795 1796912 . + . ID=gene-LPH41_RS07785;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LPH41_RS07785;old_locus_tag=LPH41_07785 NZ_CP087680.1 Protein Homology CDS 1794795 1796912 . + 0 ID=cds-WP_038272873.1;Parent=gene-LPH41_RS07785;Dbxref=Genbank:WP_038272873.1;Name=WP_038272873.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895046.1;locus_tag=LPH41_RS07785;product=elongation factor G;protein_id=WP_038272873.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1797020 1798210 . + . ID=gene-LPH41_RS07790;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LPH41_RS07790;old_locus_tag=LPH41_07790 NZ_CP087680.1 Protein Homology CDS 1797020 1798210 . + 0 ID=cds-WP_038273292.1-2;Parent=gene-LPH41_RS07790;Dbxref=Genbank:WP_038273292.1;Name=WP_038273292.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=LPH41_RS07790;product=elongation factor Tu;protein_id=WP_038273292.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1800011 1800880 . + . ID=gene-LPH41_RS07795;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LPH41_RS07795;old_locus_tag=LPH41_07795 NZ_CP087680.1 Protein Homology CDS 1800011 1800880 . + 0 ID=cds-WP_038271774.1;Parent=gene-LPH41_RS07795;Dbxref=Genbank:WP_038271774.1;Name=WP_038271774.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084683.1;locus_tag=LPH41_RS07795;product=protease HtpX;protein_id=WP_038271774.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1801270 1803342 . - . ID=gene-LPH41_RS07800;Name=LPH41_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07800;old_locus_tag=LPH41_07800 NZ_CP087680.1 Protein Homology CDS 1801270 1803342 . - 0 ID=cds-WP_038271772.1;Parent=gene-LPH41_RS07800;Dbxref=Genbank:WP_038271772.1;Name=WP_038271772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895041.1;locus_tag=LPH41_RS07800;product=EAL domain-containing protein;protein_id=WP_038271772.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1804864 1805076 . + . ID=gene-LPH41_RS07805;Name=LPH41_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07805;old_locus_tag=LPH41_07805 NZ_CP087680.1 Protein Homology CDS 1804864 1805076 . + 0 ID=cds-WP_038271770.1;Parent=gene-LPH41_RS07805;Dbxref=Genbank:WP_038271770.1;Name=WP_038271770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913053.1;locus_tag=LPH41_RS07805;product=cold-shock protein;protein_id=WP_038271770.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1805475 1807034 . + . ID=gene-LPH41_RS07810;Name=LPH41_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07810;old_locus_tag=LPH41_07810 NZ_CP087680.1 Protein Homology CDS 1805475 1807034 . + 0 ID=cds-WP_038271785.1;Parent=gene-LPH41_RS07810;Dbxref=Genbank:WP_038271785.1;Name=WP_038271785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098324.1;locus_tag=LPH41_RS07810;product=YdiU family protein;protein_id=WP_038271785.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1807342 1809213 . + . ID=gene-LPH41_RS07815;Name=LPH41_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07815;old_locus_tag=LPH41_07815 NZ_CP087680.1 Protein Homology CDS 1807342 1809213 . + 0 ID=cds-WP_038271767.1;Parent=gene-LPH41_RS07815;Dbxref=Genbank:WP_038271767.1;Name=WP_038271767.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923190.1;locus_tag=LPH41_RS07815;product=ATP-binding cassette domain-containing protein;protein_id=WP_038271767.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1809269 1809685 . - . ID=gene-LPH41_RS07820;Name=LPH41_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07820;old_locus_tag=LPH41_07820 NZ_CP087680.1 Protein Homology CDS 1809269 1809685 . - 0 ID=cds-WP_038271765.1;Parent=gene-LPH41_RS07820;Dbxref=Genbank:WP_038271765.1;Name=WP_038271765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852034.1;locus_tag=LPH41_RS07820;product=barstar family protein;protein_id=WP_038271765.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1809682 1810116 . - . ID=gene-LPH41_RS07825;Name=LPH41_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07825;old_locus_tag=LPH41_07825 NZ_CP087680.1 Protein Homology CDS 1809682 1810116 . - 0 ID=cds-WP_038271763.1;Parent=gene-LPH41_RS07825;Dbxref=Genbank:WP_038271763.1;Name=WP_038271763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450339.1;locus_tag=LPH41_RS07825;product=ribonuclease;protein_id=WP_038271763.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1810374 1810985 . + . ID=gene-LPH41_RS07830;Name=LPH41_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07830;old_locus_tag=LPH41_07830 NZ_CP087680.1 Protein Homology CDS 1810374 1810985 . + 0 ID=cds-WP_038271760.1;Parent=gene-LPH41_RS07830;Dbxref=Genbank:WP_038271760.1;Name=WP_038271760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037422.1;locus_tag=LPH41_RS07830;product=superoxide dismutase;protein_id=WP_038271760.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1812347 1812745 . - . ID=gene-LPH41_RS07835;Name=LPH41_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07835;old_locus_tag=LPH41_07835 NZ_CP087680.1 Protein Homology CDS 1812347 1812745 . - 0 ID=cds-WP_038271784.1;Parent=gene-LPH41_RS07835;Dbxref=Genbank:WP_038271784.1;Name=WP_038271784.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338114.1;locus_tag=LPH41_RS07835;product=response regulator;protein_id=WP_038271784.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1814427 1815185 . + . ID=gene-LPH41_RS07840;Name=LPH41_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07840;old_locus_tag=LPH41_07840 NZ_CP087680.1 Protein Homology CDS 1814427 1815185 . + 0 ID=cds-WP_038271783.1;Parent=gene-LPH41_RS07840;Dbxref=Genbank:WP_038271783.1;Name=WP_038271783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337128.1;locus_tag=LPH41_RS07840;product=sulfurtransferase;protein_id=WP_038271783.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1815452 1816099 . + . ID=gene-LPH41_RS07845;Name=LPH41_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07845;old_locus_tag=LPH41_07845 NZ_CP087680.1 Protein Homology CDS 1815452 1816099 . + 0 ID=cds-WP_038271757.1;Parent=gene-LPH41_RS07845;Dbxref=Genbank:WP_038271757.1;Name=WP_038271757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408972.1;locus_tag=LPH41_RS07845;product=response regulator transcription factor;protein_id=WP_038271757.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1816804 1820208 . - . ID=gene-LPH41_RS07850;Name=LPH41_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07850;old_locus_tag=LPH41_07850 NZ_CP087680.1 Protein Homology CDS 1816804 1820208 . - 0 ID=cds-WP_038271755.1;Parent=gene-LPH41_RS07850;Dbxref=Genbank:WP_038271755.1;Name=WP_038271755.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895025.1;locus_tag=LPH41_RS07850;product=Rne/Rng family ribonuclease;protein_id=WP_038271755.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1820610 1821602 . + . ID=gene-LPH41_RS07855;Name=LPH41_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07855;old_locus_tag=LPH41_07855 NZ_CP087680.1 Protein Homology CDS 1820610 1821602 . + 0 ID=cds-WP_051482353.1;Parent=gene-LPH41_RS07855;Dbxref=Genbank:WP_051482353.1;Name=WP_051482353.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852040.1;locus_tag=LPH41_RS07855;product=RluA family pseudouridine synthase;protein_id=WP_051482353.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1822116 1822301 . - . ID=gene-LPH41_RS07860;Name=LPH41_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07860;old_locus_tag=LPH41_07860 NZ_CP087680.1 GeneMarkS-2+ CDS 1822116 1822301 . - 0 ID=cds-WP_081755461.1;Parent=gene-LPH41_RS07860;Dbxref=Genbank:WP_081755461.1;Name=WP_081755461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07860;product=hypothetical protein;protein_id=WP_081755461.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1822573 1822986 . - . ID=gene-LPH41_RS07865;Name=LPH41_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07865;old_locus_tag=LPH41_07865 NZ_CP087680.1 Protein Homology CDS 1822573 1822986 . - 0 ID=cds-WP_038271753.1;Parent=gene-LPH41_RS07865;Dbxref=Genbank:WP_038271753.1;Name=WP_038271753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338113.1;locus_tag=LPH41_RS07865;product=energy transducer TonB;protein_id=WP_038271753.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1822994 1823344 . - . ID=gene-LPH41_RS07870;Name=LPH41_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07870;old_locus_tag=LPH41_07870 NZ_CP087680.1 Protein Homology CDS 1822994 1823344 . - 0 ID=cds-WP_038271751.1;Parent=gene-LPH41_RS07870;Dbxref=Genbank:WP_038271751.1;Name=WP_038271751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087537.1;locus_tag=LPH41_RS07870;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_038271751.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1823430 1824029 . + . ID=gene-LPH41_RS07875;Name=LPH41_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07875;old_locus_tag=LPH41_07875 NZ_CP087680.1 Protein Homology CDS 1823430 1824029 . + 0 ID=cds-WP_038271749.1;Parent=gene-LPH41_RS07875;Dbxref=Genbank:WP_038271749.1;Name=WP_038271749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410314.1;locus_tag=LPH41_RS07875;product=NfuA family Fe-S biogenesis protein;protein_id=WP_038271749.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1824250 1825635 . + . ID=gene-LPH41_RS07880;Name=LPH41_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07880;old_locus_tag=LPH41_07880 NZ_CP087680.1 Protein Homology CDS 1824250 1825635 . + 0 ID=cds-WP_230430853.1;Parent=gene-LPH41_RS07880;Dbxref=Genbank:WP_230430853.1;Name=WP_230430853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852042.1;locus_tag=LPH41_RS07880;product=hypothetical protein;protein_id=WP_230430853.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1826270 1826593 . - . ID=gene-LPH41_RS07885;Name=LPH41_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07885;old_locus_tag=LPH41_07885 NZ_CP087680.1 Protein Homology CDS 1826270 1826593 . - 0 ID=cds-WP_081755460.1;Parent=gene-LPH41_RS07885;Dbxref=Genbank:WP_081755460.1;Name=WP_081755460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994928.1;locus_tag=LPH41_RS07885;product=ferredoxin family protein;protein_id=WP_081755460.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1826913 1828214 . - . ID=gene-LPH41_RS07890;Name=LPH41_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07890;old_locus_tag=LPH41_07890 NZ_CP087680.1 Protein Homology CDS 1826913 1828214 . - 0 ID=cds-WP_038271742.1;Parent=gene-LPH41_RS07890;Dbxref=Genbank:WP_038271742.1;Name=WP_038271742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087534.1;locus_tag=LPH41_RS07890;product=ectonucleotide pyrophosphatase/phosphodiesterase;protein_id=WP_038271742.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1828243 1828761 . - . ID=gene-LPH41_RS07895;Name=LPH41_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07895;old_locus_tag=LPH41_07895 NZ_CP087680.1 Protein Homology CDS 1828243 1828761 . - 0 ID=cds-WP_038271739.1;Parent=gene-LPH41_RS07895;Dbxref=Genbank:WP_038271739.1;Name=WP_038271739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087533.1;locus_tag=LPH41_RS07895;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_038271739.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1829752 1830318 . + . ID=gene-LPH41_RS07900;Name=LPH41_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07900;old_locus_tag=LPH41_07900 NZ_CP087680.1 Protein Homology CDS 1829752 1830318 . + 0 ID=cds-WP_038271778.1;Parent=gene-LPH41_RS07900;Dbxref=Genbank:WP_038271778.1;Name=WP_038271778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084664.1;locus_tag=LPH41_RS07900;product=DUF4019 domain-containing protein;protein_id=WP_038271778.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1830727 1831734 . - . ID=gene-LPH41_RS07905;Name=LPH41_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07905;old_locus_tag=LPH41_07905 NZ_CP087680.1 Protein Homology CDS 1830727 1831734 . - 0 ID=cds-WP_038271738.1;Parent=gene-LPH41_RS07905;Dbxref=Genbank:WP_038271738.1;Name=WP_038271738.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852046.1;locus_tag=LPH41_RS07905;product=isocitrate dehydrogenase;protein_id=WP_038271738.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1832621 1832926 . - . ID=gene-LPH41_RS07910;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LPH41_RS07910;old_locus_tag=LPH41_07910 NZ_CP087680.1 Protein Homology CDS 1832621 1832926 . - 0 ID=cds-WP_038271736.1;Parent=gene-LPH41_RS07910;Dbxref=Genbank:WP_038271736.1;Name=WP_038271736.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084662.1;locus_tag=LPH41_RS07910;product=glutaredoxin 3;protein_id=WP_038271736.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1833047 1834681 . + . ID=gene-LPH41_RS07915;Name=LPH41_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07915;old_locus_tag=LPH41_07915 NZ_CP087680.1 Protein Homology CDS 1833047 1834681 . + 0 ID=cds-WP_038271732.1;Parent=gene-LPH41_RS07915;Dbxref=Genbank:WP_038271732.1;Name=WP_038271732.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098320.1;locus_tag=LPH41_RS07915;product=M48 family metalloprotease;protein_id=WP_038271732.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1834763 1835452 . + . ID=gene-LPH41_RS07920;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LPH41_RS07920;old_locus_tag=LPH41_07920 NZ_CP087680.1 Protein Homology CDS 1834763 1835452 . + 0 ID=cds-WP_038271729.1;Parent=gene-LPH41_RS07920;Dbxref=Genbank:WP_038271729.1;Name=WP_038271729.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341114.1;locus_tag=LPH41_RS07920;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_038271729.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1835476 1836819 . + . ID=gene-LPH41_RS07925;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LPH41_RS07925;old_locus_tag=LPH41_07925 NZ_CP087680.1 Protein Homology CDS 1835476 1836819 . + 0 ID=cds-WP_038271726.1;Parent=gene-LPH41_RS07925;Dbxref=Genbank:WP_038271726.1;Name=WP_038271726.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852050.1;locus_tag=LPH41_RS07925;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_038271726.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1836924 1839020 . + . ID=gene-LPH41_RS07930;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LPH41_RS07930;old_locus_tag=LPH41_07930 NZ_CP087680.1 Protein Homology CDS 1836924 1839020 . + 0 ID=cds-WP_160199336.1;Parent=gene-LPH41_RS07930;Dbxref=Genbank:WP_160199336.1;Name=WP_160199336.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895009.1;locus_tag=LPH41_RS07930;product=polyphosphate kinase 1;protein_id=WP_160199336.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1839089 1840615 . + . ID=gene-LPH41_RS07935;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LPH41_RS07935;old_locus_tag=LPH41_07935 NZ_CP087680.1 Protein Homology CDS 1839089 1840615 . + 0 ID=cds-WP_038271776.1;Parent=gene-LPH41_RS07935;Dbxref=Genbank:WP_038271776.1;Name=WP_038271776.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895008.1;locus_tag=LPH41_RS07935;product=exopolyphosphatase;protein_id=WP_038271776.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1841721 1842473 . + . ID=gene-LPH41_RS07940;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=LPH41_RS07940;old_locus_tag=LPH41_07940 NZ_CP087680.1 Protein Homology CDS 1841721 1842473 . + 0 ID=cds-WP_038271721.1;Parent=gene-LPH41_RS07940;Dbxref=Genbank:WP_038271721.1;Name=WP_038271721.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084656.1;locus_tag=LPH41_RS07940;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_038271721.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1843223 1844581 . - . ID=gene-LPH41_RS07945;Name=LPH41_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07945;old_locus_tag=LPH41_07945 NZ_CP087680.1 Protein Homology CDS 1843223 1844581 . - 0 ID=cds-WP_038271718.1;Parent=gene-LPH41_RS07945;Dbxref=Genbank:WP_038271718.1;Name=WP_038271718.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852053.1;locus_tag=LPH41_RS07945;product=TolC family outer membrane protein;protein_id=WP_038271718.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1844604 1845260 . - . ID=gene-LPH41_RS07950;Name=LPH41_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07950;old_locus_tag=LPH41_07950 NZ_CP087680.1 Protein Homology CDS 1844604 1845260 . - 0 ID=cds-WP_038271715.1;Parent=gene-LPH41_RS07950;Dbxref=Genbank:WP_038271715.1;Name=WP_038271715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804883.1;locus_tag=LPH41_RS07950;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_038271715.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1845697 1845903 . - . ID=gene-LPH41_RS07955;Name=LPH41_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07955;old_locus_tag=LPH41_07955 NZ_CP087680.1 GeneMarkS-2+ CDS 1845697 1845903 . - 0 ID=cds-WP_038271710.1;Parent=gene-LPH41_RS07955;Dbxref=Genbank:WP_038271710.1;Name=WP_038271710.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07955;product=hypothetical protein;protein_id=WP_038271710.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1846568 1846780 . + . ID=gene-LPH41_RS07960;Name=LPH41_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07960;old_locus_tag=LPH41_07960 NZ_CP087680.1 GeneMarkS-2+ CDS 1846568 1846780 . + 0 ID=cds-WP_038271708.1;Parent=gene-LPH41_RS07960;Dbxref=Genbank:WP_038271708.1;Name=WP_038271708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS07960;product=hypothetical protein;protein_id=WP_038271708.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1847187 1848947 . - . ID=gene-LPH41_RS07965;Name=LPH41_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07965;old_locus_tag=LPH41_07965 NZ_CP087680.1 Protein Homology CDS 1847187 1848947 . - 0 ID=cds-WP_038271705.1;Parent=gene-LPH41_RS07965;Dbxref=Genbank:WP_038271705.1;Name=WP_038271705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084653.1;locus_tag=LPH41_RS07965;product=ABC transporter ATP-binding protein/permease;protein_id=WP_038271705.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1849370 1849447 . - . ID=gene-LPH41_RS07970;Name=LPH41_RS07970;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS07970;old_locus_tag=LPH41_07970 NZ_CP087680.1 tRNAscan-SE tRNA 1849370 1849447 . - . ID=rna-LPH41_RS07970;Parent=gene-LPH41_RS07970;anticodon=(pos:complement(1849410..1849412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07970;product=tRNA-Arg NZ_CP087680.1 tRNAscan-SE exon 1849370 1849447 . - . ID=exon-LPH41_RS07970-1;Parent=rna-LPH41_RS07970;anticodon=(pos:complement(1849410..1849412));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS07970;product=tRNA-Arg NZ_CP087680.1 RefSeq pseudogene 1849750 1849902 . - . ID=gene-LPH41_RS07975;Name=LPH41_RS07975;end_range=1849902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS07975;old_locus_tag=LPH41_07975;partial=true;pseudo=true;start_range=.,1849750 NZ_CP087680.1 Protein Homology CDS 1849750 1849902 . - 0 ID=cds-LPH41_RS07975;Parent=gene-LPH41_RS07975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1849902,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LPH41_RS07975;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1849750;transl_table=11 NZ_CP087680.1 RefSeq gene 1850380 1851177 . + . ID=gene-LPH41_RS07980;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LPH41_RS07980;old_locus_tag=LPH41_07980 NZ_CP087680.1 Protein Homology CDS 1850380 1851177 . + 0 ID=cds-WP_038271700.1;Parent=gene-LPH41_RS07980;Dbxref=Genbank:WP_038271700.1;Name=WP_038271700.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084652.1;locus_tag=LPH41_RS07980;product=30S ribosomal protein S2;protein_id=WP_038271700.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1851370 1852248 . + . ID=gene-LPH41_RS07985;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LPH41_RS07985;old_locus_tag=LPH41_07985 NZ_CP087680.1 Protein Homology CDS 1851370 1852248 . + 0 ID=cds-WP_038271698.1;Parent=gene-LPH41_RS07985;Dbxref=Genbank:WP_038271698.1;Name=WP_038271698.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962895.1;locus_tag=LPH41_RS07985;product=translation elongation factor Ts;protein_id=WP_038271698.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1852802 1853380 . - . ID=gene-LPH41_RS07990;Name=LPH41_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07990;old_locus_tag=LPH41_07990 NZ_CP087680.1 Protein Homology CDS 1852802 1853380 . - 0 ID=cds-WP_038271696.1;Parent=gene-LPH41_RS07990;Dbxref=Genbank:WP_038271696.1;Name=WP_038271696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090324.1;locus_tag=LPH41_RS07990;product=response regulator transcription factor;protein_id=WP_038271696.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1853377 1854594 . - . ID=gene-LPH41_RS07995;Name=LPH41_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS07995;old_locus_tag=LPH41_07995 NZ_CP087680.1 Protein Homology CDS 1853377 1854594 . - 0 ID=cds-WP_038271694.1;Parent=gene-LPH41_RS07995;Dbxref=Genbank:WP_038271694.1;Name=WP_038271694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894996.1;locus_tag=LPH41_RS07995;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_038271694.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1854817 1856082 . + . ID=gene-LPH41_RS08000;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LPH41_RS08000;old_locus_tag=LPH41_08000 NZ_CP087680.1 Protein Homology CDS 1854817 1856082 . + 0 ID=cds-WP_038271693.1;Parent=gene-LPH41_RS08000;Dbxref=Genbank:WP_038271693.1;Name=WP_038271693.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183267.1;locus_tag=LPH41_RS08000;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_038271693.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1856063 1856767 . + . ID=gene-LPH41_RS08005;Name=LPH41_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08005;old_locus_tag=LPH41_08005 NZ_CP087680.1 Protein Homology CDS 1856063 1856767 . + 0 ID=cds-WP_038271691.1;Parent=gene-LPH41_RS08005;Dbxref=Genbank:WP_038271691.1;Name=WP_038271691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894993.1;locus_tag=LPH41_RS08005;product=phosphatase PAP2 family protein;protein_id=WP_038271691.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1856775 1857674 . - . ID=gene-LPH41_RS08010;Name=LPH41_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08010;old_locus_tag=LPH41_08010 NZ_CP087680.1 Protein Homology CDS 1856775 1857674 . - 0 ID=cds-WP_038271689.1;Parent=gene-LPH41_RS08010;Dbxref=Genbank:WP_038271689.1;Name=WP_038271689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851255.1;locus_tag=LPH41_RS08010;product=DMT family transporter;protein_id=WP_038271689.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1857668 1858723 . - . ID=gene-LPH41_RS08015;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LPH41_RS08015;old_locus_tag=LPH41_08015 NZ_CP087680.1 Protein Homology CDS 1857668 1858723 . - 0 ID=cds-WP_038271688.1;Parent=gene-LPH41_RS08015;Dbxref=Genbank:WP_038271688.1;Name=WP_038271688.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084645.1;locus_tag=LPH41_RS08015;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_038271688.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1858720 1859775 . - . ID=gene-LPH41_RS08020;Name=LPH41_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08020;old_locus_tag=LPH41_08020 NZ_CP087680.1 Protein Homology CDS 1858720 1859775 . - 0 ID=cds-WP_038271686.1;Parent=gene-LPH41_RS08020;Dbxref=Genbank:WP_038271686.1;Name=WP_038271686.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851254.1;locus_tag=LPH41_RS08020;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_038271686.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1860069 1860354 . - . ID=gene-LPH41_RS08025;Name=LPH41_RS08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08025;old_locus_tag=LPH41_08025;pseudo=true NZ_CP087680.1 Protein Homology CDS 1860069 1860354 . - 0 ID=cds-LPH41_RS08025;Parent=gene-LPH41_RS08025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894989.1;locus_tag=LPH41_RS08025;product=DUF4190 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1860692 1861432 . - . ID=gene-LPH41_RS08030;Name=LPH41_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08030;old_locus_tag=LPH41_08030 NZ_CP087680.1 Protein Homology CDS 1860692 1861432 . - 0 ID=cds-WP_038271683.1;Parent=gene-LPH41_RS08030;Dbxref=Genbank:WP_038271683.1;Name=WP_038271683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851969.1;locus_tag=LPH41_RS08030;product=ABC transporter ATP-binding protein;protein_id=WP_038271683.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1861442 1862224 . - . ID=gene-LPH41_RS08035;Name=LPH41_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08035;old_locus_tag=LPH41_08035 NZ_CP087680.1 Protein Homology CDS 1861442 1862224 . - 0 ID=cds-WP_230428509.1;Parent=gene-LPH41_RS08035;Dbxref=Genbank:WP_230428509.1;Name=WP_230428509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607499.1;locus_tag=LPH41_RS08035;product=ABC transporter permease;protein_id=WP_230428509.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1863391 1863636 . - . ID=gene-LPH41_RS08040;Name=LPH41_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08040;old_locus_tag=LPH41_08040 NZ_CP087680.1 GeneMarkS-2+ CDS 1863391 1863636 . - 0 ID=cds-WP_152536641.1;Parent=gene-LPH41_RS08040;Dbxref=Genbank:WP_152536641.1;Name=WP_152536641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08040;product=hypothetical protein;protein_id=WP_152536641.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1863593 1864993 . - . ID=gene-LPH41_RS08045;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LPH41_RS08045;old_locus_tag=LPH41_08045 NZ_CP087680.1 Protein Homology CDS 1863593 1864993 . - 0 ID=cds-WP_038271678.1;Parent=gene-LPH41_RS08045;Dbxref=Genbank:WP_038271678.1;Name=WP_038271678.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237793.1;locus_tag=LPH41_RS08045;product=asparagine--tRNA ligase;protein_id=WP_038271678.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1865212 1865550 . + . ID=gene-LPH41_RS08050;Name=LPH41_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08050;old_locus_tag=LPH41_08050 NZ_CP087680.1 Protein Homology CDS 1865212 1865550 . + 0 ID=cds-WP_038271677.1;Parent=gene-LPH41_RS08050;Dbxref=Genbank:WP_038271677.1;Name=WP_038271677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660371.1;locus_tag=LPH41_RS08050;product=iron-sulfur cluster assembly accessory protein;protein_id=WP_038271677.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1865776 1866207 . + . ID=gene-LPH41_RS08055;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LPH41_RS08055;old_locus_tag=LPH41_08055 NZ_CP087680.1 Protein Homology CDS 1865776 1866207 . + 0 ID=cds-WP_038271676.1;Parent=gene-LPH41_RS08055;Dbxref=Genbank:WP_038271676.1;Name=WP_038271676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090345.1;locus_tag=LPH41_RS08055;product=30S ribosomal protein S6;protein_id=WP_038271676.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1866220 1866450 . + . ID=gene-LPH41_RS08060;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LPH41_RS08060;old_locus_tag=LPH41_08060 NZ_CP087680.1 Protein Homology CDS 1866220 1866450 . + 0 ID=cds-WP_038271673.1;Parent=gene-LPH41_RS08060;Dbxref=Genbank:WP_038271673.1;Name=WP_038271673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1;locus_tag=LPH41_RS08060;product=30S ribosomal protein S18;protein_id=WP_038271673.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1866605 1867054 . + . ID=gene-LPH41_RS08065;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LPH41_RS08065;old_locus_tag=LPH41_08065 NZ_CP087680.1 Protein Homology CDS 1866605 1867054 . + 0 ID=cds-WP_038271671.1;Parent=gene-LPH41_RS08065;Dbxref=Genbank:WP_038271671.1;Name=WP_038271671.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014160531.1;locus_tag=LPH41_RS08065;product=50S ribosomal protein L9;protein_id=WP_038271671.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1867271 1870774 . + . ID=gene-LPH41_RS08070;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LPH41_RS08070;old_locus_tag=LPH41_08070 NZ_CP087680.1 Protein Homology CDS 1867271 1870774 . + 0 ID=cds-WP_114867185.1;Parent=gene-LPH41_RS08070;Dbxref=Genbank:WP_114867185.1;Name=WP_114867185.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084630.1;locus_tag=LPH41_RS08070;product=chromosome segregation protein SMC;protein_id=WP_114867185.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1870832 1871563 . + . ID=gene-LPH41_RS08075;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=LPH41_RS08075;old_locus_tag=LPH41_08075 NZ_CP087680.1 Protein Homology CDS 1870832 1871563 . + 0 ID=cds-WP_038272747.1;Parent=gene-LPH41_RS08075;Dbxref=Genbank:WP_038272747.1;Name=WP_038272747.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903841.1;locus_tag=LPH41_RS08075;product=cell division protein ZipA;protein_id=WP_038272747.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1871830 1872060 . + . ID=gene-LPH41_RS08080;Name=LPH41_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08080;old_locus_tag=LPH41_08080 NZ_CP087680.1 GeneMarkS-2+ CDS 1871830 1872060 . + 0 ID=cds-WP_038272749.1;Parent=gene-LPH41_RS08080;Dbxref=Genbank:WP_038272749.1;Name=WP_038272749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08080;product=hypothetical protein;protein_id=WP_038272749.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1872821 1875316 . + . ID=gene-LPH41_RS08085;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LPH41_RS08085;old_locus_tag=LPH41_08085 NZ_CP087680.1 Protein Homology CDS 1872821 1875316 . + 0 ID=cds-WP_038272750.1;Parent=gene-LPH41_RS08085;Dbxref=Genbank:WP_038272750.1;Name=WP_038272750.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090351.1;locus_tag=LPH41_RS08085;product=NAD-dependent DNA ligase LigA;protein_id=WP_038272750.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1875327 1875800 . + . ID=gene-LPH41_RS08090;Name=LPH41_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08090;old_locus_tag=LPH41_08090 NZ_CP087680.1 Protein Homology CDS 1875327 1875800 . + 0 ID=cds-WP_038272751.1;Parent=gene-LPH41_RS08090;Dbxref=Genbank:WP_038272751.1;Name=WP_038272751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338106.1;locus_tag=LPH41_RS08090;product=GNAT family N-acetyltransferase;protein_id=WP_038272751.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1875797 1876747 . + . ID=gene-LPH41_RS08095;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LPH41_RS08095;old_locus_tag=LPH41_08095 NZ_CP087680.1 Protein Homology CDS 1875797 1876747 . + 0 ID=cds-WP_114867184.1;Parent=gene-LPH41_RS08095;Dbxref=Genbank:WP_114867184.1;Name=WP_114867184.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084622.1;locus_tag=LPH41_RS08095;product=EF-P lysine aminoacylase EpmA;protein_id=WP_114867184.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1876948 1877628 . + . ID=gene-LPH41_RS08100;Name=LPH41_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08100;old_locus_tag=LPH41_08100 NZ_CP087680.1 Protein Homology CDS 1876948 1877628 . + 0 ID=cds-WP_069636222.1;Parent=gene-LPH41_RS08100;Dbxref=Genbank:WP_069636222.1;Name=WP_069636222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894975.1;locus_tag=LPH41_RS08100;product=DUF3011 domain-containing protein;protein_id=WP_069636222.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1877773 1878837 . + . ID=gene-LPH41_RS08105;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LPH41_RS08105;old_locus_tag=LPH41_08105 NZ_CP087680.1 Protein Homology CDS 1877773 1878837 . + 0 ID=cds-WP_038272761.1;Parent=gene-LPH41_RS08105;Dbxref=Genbank:WP_038272761.1;Name=WP_038272761.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051043.1;locus_tag=LPH41_RS08105;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_038272761.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1879038 1881758 . + . ID=gene-LPH41_RS08110;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LPH41_RS08110;old_locus_tag=LPH41_08110 NZ_CP087680.1 Protein Homology CDS 1879038 1881758 . + 0 ID=cds-WP_038272755.1;Parent=gene-LPH41_RS08110;Dbxref=Genbank:WP_038272755.1;Name=WP_038272755.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851247.1;locus_tag=LPH41_RS08110;product=DNA gyrase subunit A;protein_id=WP_038272755.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1882006 1884468 . + . ID=gene-LPH41_RS08115;Name=LPH41_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08115;old_locus_tag=LPH41_08115 NZ_CP087680.1 Protein Homology CDS 1882006 1884468 . + 0 ID=cds-WP_051482380.1;Parent=gene-LPH41_RS08115;Dbxref=Genbank:WP_051482380.1;Name=WP_051482380.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116881.1;locus_tag=LPH41_RS08115;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_051482380.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1884552 1884689 . + . ID=gene-LPH41_RS08120;Name=LPH41_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08120;old_locus_tag=LPH41_08120 NZ_CP087680.1 GeneMarkS-2+ CDS 1884552 1884689 . + 0 ID=cds-WP_205395218.1;Parent=gene-LPH41_RS08120;Dbxref=Genbank:WP_205395218.1;Name=WP_205395218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08120;product=hypothetical protein;protein_id=WP_205395218.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1885402 1887144 . + . ID=gene-LPH41_RS08125;Name=LPH41_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08125;old_locus_tag=LPH41_08125 NZ_CP087680.1 Protein Homology CDS 1885402 1887144 . + 0 ID=cds-WP_038272757.1;Parent=gene-LPH41_RS08125;Dbxref=Genbank:WP_038272757.1;Name=WP_038272757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382766.1;locus_tag=LPH41_RS08125;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_038272757.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1887168 1888538 . + . ID=gene-LPH41_RS08130;Name=LPH41_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08130;old_locus_tag=LPH41_08130 NZ_CP087680.1 Protein Homology CDS 1887168 1888538 . + 0 ID=cds-WP_230439273.1;Parent=gene-LPH41_RS08130;Dbxref=Genbank:WP_230439273.1;Name=WP_230439273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LPH41_RS08130;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_230439273.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1888498 1897086 . + . ID=gene-LPH41_RS08135;Name=LPH41_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08135;old_locus_tag=LPH41_08135 NZ_CP087680.1 Protein Homology CDS 1888498 1897086 . + 0 ID=cds-WP_230439274.1;Parent=gene-LPH41_RS08135;Dbxref=Genbank:WP_230439274.1;Name=WP_230439274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LPH41_RS08135;product=hemagglutinin repeat-containing protein;protein_id=WP_230439274.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1897092 1897910 . + . ID=gene-LPH41_RS08140;Name=LPH41_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08140;old_locus_tag=LPH41_08140 NZ_CP087680.1 Protein Homology CDS 1897092 1897910 . + 0 ID=cds-WP_038270464.1;Parent=gene-LPH41_RS08140;Dbxref=Genbank:WP_038270464.1;Name=WP_038270464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089585.1;locus_tag=LPH41_RS08140;product=DUF769 domain-containing protein;protein_id=WP_038270464.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1897919 1898737 . + . ID=gene-LPH41_RS08145;Name=LPH41_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08145;old_locus_tag=LPH41_08145 NZ_CP087680.1 Protein Homology CDS 1897919 1898737 . + 0 ID=cds-WP_038270465.1;Parent=gene-LPH41_RS08145;Dbxref=Genbank:WP_038270465.1;Name=WP_038270465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098252.1;locus_tag=LPH41_RS08145;product=DUF769 domain-containing protein;protein_id=WP_038270465.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1899123 1899635 . - . ID=gene-LPH41_RS08150;Name=LPH41_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08150;old_locus_tag=LPH41_08150 NZ_CP087680.1 GeneMarkS-2+ CDS 1899123 1899635 . - 0 ID=cds-WP_230428245.1;Parent=gene-LPH41_RS08150;Dbxref=Genbank:WP_230428245.1;Name=WP_230428245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08150;product=hypothetical protein;protein_id=WP_230428245.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1900096 1901109 . - . ID=gene-LPH41_RS08155;Name=LPH41_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08155;old_locus_tag=LPH41_08155 NZ_CP087680.1 Protein Homology CDS 1900096 1901109 . - 0 ID=cds-WP_038270467.1;Parent=gene-LPH41_RS08155;Dbxref=Genbank:WP_038270467.1;Name=WP_038270467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893420.1;locus_tag=LPH41_RS08155;product=magnesium and cobalt transport protein CorA;protein_id=WP_038270467.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1901106 1902278 . - . ID=gene-LPH41_RS08160;Name=LPH41_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08160;old_locus_tag=LPH41_08160 NZ_CP087680.1 Protein Homology CDS 1901106 1902278 . - 0 ID=cds-WP_230428299.1;Parent=gene-LPH41_RS08160;Dbxref=Genbank:WP_230428299.1;Name=WP_230428299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851565.1;locus_tag=LPH41_RS08160;product=DUF4105 domain-containing protein;protein_id=WP_230428299.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1902329 1903210 . - . ID=gene-LPH41_RS08165;Name=LPH41_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08165;old_locus_tag=LPH41_08165 NZ_CP087680.1 Protein Homology CDS 1902329 1903210 . - 0 ID=cds-WP_038270469.1;Parent=gene-LPH41_RS08165;Dbxref=Genbank:WP_038270469.1;Name=WP_038270469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488337.1;locus_tag=LPH41_RS08165;product=HlyC/CorC family transporter;protein_id=WP_038270469.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1903309 1903824 . - . ID=gene-LPH41_RS08170;Name=LPH41_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08170;old_locus_tag=LPH41_08170 NZ_CP087680.1 Protein Homology CDS 1903309 1903824 . - 0 ID=cds-WP_038270470.1;Parent=gene-LPH41_RS08170;Dbxref=Genbank:WP_038270470.1;Name=WP_038270470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851567.1;locus_tag=LPH41_RS08170;product=hypothetical protein;protein_id=WP_038270470.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1903824 1904306 . - . ID=gene-LPH41_RS08175;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LPH41_RS08175;old_locus_tag=LPH41_08175 NZ_CP087680.1 Protein Homology CDS 1903824 1904306 . - 0 ID=cds-WP_038270471.1;Parent=gene-LPH41_RS08175;Dbxref=Genbank:WP_038270471.1;Name=WP_038270471.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571323.1;locus_tag=LPH41_RS08175;product=rRNA maturation RNase YbeY;protein_id=WP_038270471.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1904377 1905360 . - . ID=gene-LPH41_RS08180;Name=LPH41_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08180;old_locus_tag=LPH41_08180 NZ_CP087680.1 Protein Homology CDS 1904377 1905360 . - 0 ID=cds-WP_038270472.1;Parent=gene-LPH41_RS08180;Dbxref=Genbank:WP_038270472.1;Name=WP_038270472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851568.1;locus_tag=LPH41_RS08180;product=PhoH family protein;protein_id=WP_038270472.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1905704 1907197 . - . ID=gene-LPH41_RS08185;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LPH41_RS08185;old_locus_tag=LPH41_08185 NZ_CP087680.1 Protein Homology CDS 1905704 1907197 . - 0 ID=cds-WP_038270473.1;Parent=gene-LPH41_RS08185;Dbxref=Genbank:WP_038270473.1;Name=WP_038270473.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851569.1;locus_tag=LPH41_RS08185;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_038270473.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1907366 1908274 . + . ID=gene-LPH41_RS08190;Name=LPH41_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08190;old_locus_tag=LPH41_08190 NZ_CP087680.1 Protein Homology CDS 1907366 1908274 . + 0 ID=cds-WP_038270474.1;Parent=gene-LPH41_RS08190;Dbxref=Genbank:WP_038270474.1;Name=WP_038270474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089613.1;locus_tag=LPH41_RS08190;product=lytic transglycosylase domain-containing protein;protein_id=WP_038270474.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1908455 1909014 . + . ID=gene-LPH41_RS08195;Name=petA;end_range=1909014,.;gbkey=Gene;gene=petA;gene_biotype=pseudogene;locus_tag=LPH41_RS08195;old_locus_tag=LPH41_08195;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 1908455 1909014 . + 0 ID=cds-LPH41_RS08195;Parent=gene-LPH41_RS08195;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;end_range=1909014,.;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382428.1;locus_tag=LPH41_RS08195;partial=true;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1909045 1910303 . + . ID=gene-LPH41_RS08200;Name=LPH41_RS08200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08200;old_locus_tag=LPH41_08200;pseudo=true NZ_CP087680.1 Protein Homology CDS 1909045 1910303 . + 0 ID=cds-LPH41_RS08200;Parent=gene-LPH41_RS08200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965674.1;locus_tag=LPH41_RS08200;product=cytochrome bc complex cytochrome b subunit;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 1910296 1911020 . + . ID=gene-LPH41_RS08205;Name=LPH41_RS08205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08205;old_locus_tag=LPH41_08205;pseudo=true NZ_CP087680.1 Protein Homology CDS 1910296 1911020 . + 0 ID=cds-LPH41_RS08205;Parent=gene-LPH41_RS08205;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098246.1;locus_tag=LPH41_RS08205;product=cytochrome c1;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 1911177 1911812 . + . ID=gene-LPH41_RS08210;Name=LPH41_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08210;old_locus_tag=LPH41_08210 NZ_CP087680.1 Protein Homology CDS 1911177 1911812 . + 0 ID=cds-WP_038270475.1;Parent=gene-LPH41_RS08210;Dbxref=Genbank:WP_038270475.1;Name=WP_038270475.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152019.1;locus_tag=LPH41_RS08210;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_038270475.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1911849 1912283 . + . ID=gene-LPH41_RS08215;Name=LPH41_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08215;old_locus_tag=LPH41_08215 NZ_CP087680.1 Protein Homology CDS 1911849 1912283 . + 0 ID=cds-WP_038270476.1;Parent=gene-LPH41_RS08215;Dbxref=Genbank:WP_038270476.1;Name=WP_038270476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901612.1;locus_tag=LPH41_RS08215;product=ClpXP protease specificity-enhancing factor;protein_id=WP_038270476.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1913712 1914488 . + . ID=gene-LPH41_RS08220;Name=LPH41_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08220;old_locus_tag=LPH41_08220 NZ_CP087680.1 Protein Homology CDS 1913712 1914488 . + 0 ID=cds-WP_038270571.1;Parent=gene-LPH41_RS08220;Dbxref=Genbank:WP_038270571.1;Name=WP_038270571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903673.1;locus_tag=LPH41_RS08220;product=SDR family oxidoreductase;protein_id=WP_038270571.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1916328 1916501 . - . ID=gene-LPH41_RS08225;Name=LPH41_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08225;old_locus_tag=LPH41_08225 NZ_CP087680.1 GeneMarkS-2+ CDS 1916328 1916501 . - 0 ID=cds-WP_160165130.1;Parent=gene-LPH41_RS08225;Dbxref=Genbank:WP_160165130.1;Name=WP_160165130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08225;product=hypothetical protein;protein_id=WP_160165130.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1916649 1916897 . + . ID=gene-LPH41_RS08230;Name=LPH41_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08230;old_locus_tag=LPH41_08230 NZ_CP087680.1 Protein Homology CDS 1916649 1916897 . + 0 ID=cds-WP_038270479.1;Parent=gene-LPH41_RS08230;Dbxref=Genbank:WP_038270479.1;Name=WP_038270479.1;Ontology_term=GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893451.1;locus_tag=LPH41_RS08230;product=FeoA domain-containing protein;protein_id=WP_038270479.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1916894 1918744 . + . ID=gene-LPH41_RS08235;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LPH41_RS08235;old_locus_tag=LPH41_08235 NZ_CP087680.1 Protein Homology CDS 1916894 1918744 . + 0 ID=cds-WP_038270480.1;Parent=gene-LPH41_RS08235;Dbxref=Genbank:WP_038270480.1;Name=WP_038270480.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851591.1;locus_tag=LPH41_RS08235;product=ferrous iron transport protein B;protein_id=WP_038270480.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1918748 1918996 . + . ID=gene-LPH41_RS08240;Name=LPH41_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08240;old_locus_tag=LPH41_08240 NZ_CP087680.1 Protein Homology CDS 1918748 1918996 . + 0 ID=cds-WP_038270481.1;Parent=gene-LPH41_RS08240;Dbxref=Genbank:WP_038270481.1;Name=WP_038270481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086434.1;locus_tag=LPH41_RS08240;product=hypothetical protein;protein_id=WP_038270481.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1920129 1921007 . - . ID=gene-LPH41_RS08245;Name=LPH41_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08245;old_locus_tag=LPH41_08245 NZ_CP087680.1 Protein Homology CDS 1920129 1921007 . - 0 ID=cds-WP_038270483.1;Parent=gene-LPH41_RS08245;Dbxref=Genbank:WP_038270483.1;Name=WP_038270483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089657.1;locus_tag=LPH41_RS08245;product=outer membrane protein assembly factor BamD;protein_id=WP_038270483.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1921122 1922099 . + . ID=gene-LPH41_RS08250;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=LPH41_RS08250;old_locus_tag=LPH41_08250 NZ_CP087680.1 Protein Homology CDS 1921122 1922099 . + 0 ID=cds-WP_038270484.1;Parent=gene-LPH41_RS08250;Dbxref=Genbank:WP_038270484.1;Name=WP_038270484.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089658.1;locus_tag=LPH41_RS08250;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_038270484.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1922107 1922889 . + . ID=gene-LPH41_RS08255;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LPH41_RS08255;old_locus_tag=LPH41_08255 NZ_CP087680.1 Protein Homology CDS 1922107 1922889 . + 0 ID=cds-WP_038270485.1;Parent=gene-LPH41_RS08255;Dbxref=Genbank:WP_038270485.1;Name=WP_038270485.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851595.1;locus_tag=LPH41_RS08255;product=peptidoglycan editing factor PgeF;protein_id=WP_038270485.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1923378 1923803 . + . ID=gene-LPH41_RS08260;Name=LPH41_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08260;old_locus_tag=LPH41_08260 NZ_CP087680.1 Protein Homology CDS 1923378 1923803 . + 0 ID=cds-WP_038270486.1;Parent=gene-LPH41_RS08260;Dbxref=Genbank:WP_038270486.1;Name=WP_038270486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086425.1;locus_tag=LPH41_RS08260;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_038270486.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1923983 1925671 . - . ID=gene-LPH41_RS08265;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LPH41_RS08265;old_locus_tag=LPH41_08265 NZ_CP087680.1 Protein Homology CDS 1923983 1925671 . - 0 ID=cds-WP_230428244.1;Parent=gene-LPH41_RS08265;Dbxref=Genbank:WP_230428244.1;Name=WP_230428244.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012479432.1;locus_tag=LPH41_RS08265;product=malate dehydrogenase (quinone);protein_id=WP_230428244.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1926444 1928108 . - . ID=gene-LPH41_RS08270;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LPH41_RS08270;old_locus_tag=LPH41_08270 NZ_CP087680.1 Protein Homology CDS 1926444 1928108 . - 0 ID=cds-WP_038270488.1;Parent=gene-LPH41_RS08270;Dbxref=Genbank:WP_038270488.1;Name=WP_038270488.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398294.1;locus_tag=LPH41_RS08270;product=energy-dependent translational throttle protein EttA;protein_id=WP_038270488.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1928629 1929882 . + . ID=gene-LPH41_RS08275;Name=LPH41_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08275;old_locus_tag=LPH41_08275 NZ_CP087680.1 Protein Homology CDS 1928629 1929882 . + 0 ID=cds-WP_038270489.1;Parent=gene-LPH41_RS08275;Dbxref=Genbank:WP_038270489.1;Name=WP_038270489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382734.1;locus_tag=LPH41_RS08275;product=serine hydroxymethyltransferase;protein_id=WP_038270489.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1929966 1930472 . + . ID=gene-LPH41_RS08280;Name=LPH41_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08280;old_locus_tag=LPH41_08280 NZ_CP087680.1 Protein Homology CDS 1929966 1930472 . + 0 ID=cds-WP_038270490.1;Parent=gene-LPH41_RS08280;Dbxref=Genbank:WP_038270490.1;Name=WP_038270490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893466.1;locus_tag=LPH41_RS08280;product=hypothetical protein;protein_id=WP_038270490.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1930490 1931035 . + . ID=gene-LPH41_RS08285;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LPH41_RS08285;old_locus_tag=LPH41_08285 NZ_CP087680.1 Protein Homology CDS 1930490 1931035 . + 0 ID=cds-WP_038270491.1;Parent=gene-LPH41_RS08285;Dbxref=Genbank:WP_038270491.1;Name=WP_038270491.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086418.1;locus_tag=LPH41_RS08285;product=transcriptional regulator NrdR;protein_id=WP_038270491.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1931144 1931422 . + . ID=gene-LPH41_RS08290;Name=LPH41_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08290;old_locus_tag=LPH41_08290 NZ_CP087680.1 GeneMarkS-2+ CDS 1931144 1931422 . + 0 ID=cds-WP_038270492.1;Parent=gene-LPH41_RS08290;Dbxref=Genbank:WP_038270492.1;Name=WP_038270492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08290;product=hypothetical protein;protein_id=WP_038270492.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1931435 1932529 . + . ID=gene-LPH41_RS08295;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LPH41_RS08295;old_locus_tag=LPH41_08295 NZ_CP087680.1 Protein Homology CDS 1931435 1932529 . + 0 ID=cds-WP_038270493.1;Parent=gene-LPH41_RS08295;Dbxref=Genbank:WP_038270493.1;Name=WP_038270493.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893469.1;locus_tag=LPH41_RS08295;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_038270493.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1933216 1933815 . + . ID=gene-LPH41_RS08300;Name=LPH41_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08300;old_locus_tag=LPH41_08300 NZ_CP087680.1 Protein Homology CDS 1933216 1933815 . + 0 ID=cds-WP_038270494.1;Parent=gene-LPH41_RS08300;Dbxref=Genbank:WP_038270494.1;Name=WP_038270494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576782.1;locus_tag=LPH41_RS08300;product=riboflavin synthase;protein_id=WP_038270494.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1933815 1934948 . + . ID=gene-LPH41_RS08305;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LPH41_RS08305;old_locus_tag=LPH41_08305 NZ_CP087680.1 Protein Homology CDS 1933815 1934948 . + 0 ID=cds-WP_038270495.1;Parent=gene-LPH41_RS08305;Dbxref=Genbank:WP_038270495.1;Name=WP_038270495.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851604.1;locus_tag=LPH41_RS08305;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_038270495.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1934979 1935443 . + . ID=gene-LPH41_RS08310;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LPH41_RS08310;old_locus_tag=LPH41_08310 NZ_CP087680.1 Protein Homology CDS 1934979 1935443 . + 0 ID=cds-WP_038270496.1;Parent=gene-LPH41_RS08310;Dbxref=Genbank:WP_038270496.1;Name=WP_038270496.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409394.1;locus_tag=LPH41_RS08310;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_038270496.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1935440 1935910 . + . ID=gene-LPH41_RS08315;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LPH41_RS08315;old_locus_tag=LPH41_08315 NZ_CP087680.1 Protein Homology CDS 1935440 1935910 . + 0 ID=cds-WP_038270497.1;Parent=gene-LPH41_RS08315;Dbxref=Genbank:WP_038270497.1;Name=WP_038270497.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893474.1;locus_tag=LPH41_RS08315;product=transcription antitermination factor NusB;protein_id=WP_038270497.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1935994 1936968 . + . ID=gene-LPH41_RS08320;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LPH41_RS08320;old_locus_tag=LPH41_08320 NZ_CP087680.1 Protein Homology CDS 1935994 1936968 . + 0 ID=cds-WP_038270498.1;Parent=gene-LPH41_RS08320;Dbxref=Genbank:WP_038270498.1;Name=WP_038270498.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851606.1;locus_tag=LPH41_RS08320;product=thiamine-phosphate kinase;protein_id=WP_038270498.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1938480 1938773 . + . ID=gene-LPH41_RS08325;Name=LPH41_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08325;old_locus_tag=LPH41_08325 NZ_CP087680.1 Protein Homology CDS 1938480 1938773 . + 0 ID=cds-WP_038270572.1;Parent=gene-LPH41_RS08325;Dbxref=Genbank:WP_038270572.1;Name=WP_038270572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089684.1;locus_tag=LPH41_RS08325;product=hypothetical protein;protein_id=WP_038270572.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1938764 1938952 . - . ID=gene-LPH41_RS08330;Name=LPH41_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08330;old_locus_tag=LPH41_08330 NZ_CP087680.1 GeneMarkS-2+ CDS 1938764 1938952 . - 0 ID=cds-WP_171898061.1;Parent=gene-LPH41_RS08330;Dbxref=Genbank:WP_171898061.1;Name=WP_171898061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08330;product=hypothetical protein;protein_id=WP_171898061.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1938975 1939106 . + . ID=gene-LPH41_RS12035;Name=LPH41_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12035 NZ_CP087680.1 GeneMarkS-2+ CDS 1938975 1939106 . + 0 ID=cds-WP_267903159.1;Parent=gene-LPH41_RS12035;Dbxref=Genbank:WP_267903159.1;Name=WP_267903159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12035;product=hypothetical protein;protein_id=WP_267903159.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1939626 1939898 . + . ID=gene-LPH41_RS08335;Name=LPH41_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08335;old_locus_tag=LPH41_08335 NZ_CP087680.1 GeneMarkS-2+ CDS 1939626 1939898 . + 0 ID=cds-WP_038270501.1;Parent=gene-LPH41_RS08335;Dbxref=Genbank:WP_038270501.1;Name=WP_038270501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08335;product=hypothetical protein;protein_id=WP_038270501.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1940752 1942152 . - . ID=gene-LPH41_RS08340;Name=LPH41_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08340;old_locus_tag=LPH41_08340 NZ_CP087680.1 Protein Homology CDS 1940752 1942152 . - 0 ID=cds-WP_038270502.1;Parent=gene-LPH41_RS08340;Dbxref=Genbank:WP_038270502.1;Name=WP_038270502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365742.1;locus_tag=LPH41_RS08340;product=PhoH family protein;protein_id=WP_038270502.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1942230 1942709 . - . ID=gene-LPH41_RS08345;Name=LPH41_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08345;old_locus_tag=LPH41_08345 NZ_CP087680.1 Protein Homology CDS 1942230 1942709 . - 0 ID=cds-WP_038270503.1;Parent=gene-LPH41_RS08345;Dbxref=Genbank:WP_038270503.1;Name=WP_038270503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851611.1;locus_tag=LPH41_RS08345;product=peroxiredoxin;protein_id=WP_038270503.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1942757 1943383 . - . ID=gene-LPH41_RS08350;Name=LPH41_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08350;old_locus_tag=LPH41_08350 NZ_CP087680.1 Protein Homology CDS 1942757 1943383 . - 0 ID=cds-WP_114867181.1;Parent=gene-LPH41_RS08350;Dbxref=Genbank:WP_114867181.1;Name=WP_114867181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503111.1;locus_tag=LPH41_RS08350;product=glycine cleavage system protein R;protein_id=WP_114867181.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1943485 1944393 . + . ID=gene-LPH41_RS08355;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LPH41_RS08355;old_locus_tag=LPH41_08355 NZ_CP087680.1 Protein Homology CDS 1943485 1944393 . + 0 ID=cds-WP_038270504.1;Parent=gene-LPH41_RS08355;Dbxref=Genbank:WP_038270504.1;Name=WP_038270504.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089694.1;locus_tag=LPH41_RS08355;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_038270504.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1944413 1944919 . + . ID=gene-LPH41_RS08360;Name=LPH41_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08360;old_locus_tag=LPH41_08360 NZ_CP087680.1 Protein Homology CDS 1944413 1944919 . + 0 ID=cds-WP_038270505.1;Parent=gene-LPH41_RS08360;Dbxref=Genbank:WP_038270505.1;Name=WP_038270505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089696.1;locus_tag=LPH41_RS08360;product=hypothetical protein;protein_id=WP_038270505.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1945626 1946171 . - . ID=gene-LPH41_RS08365;Name=LPH41_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08365;old_locus_tag=LPH41_08365 NZ_CP087680.1 Protein Homology CDS 1945626 1946171 . - 0 ID=cds-WP_038270574.1;Parent=gene-LPH41_RS08365;Dbxref=Genbank:WP_038270574.1;Name=WP_038270574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098232.1;locus_tag=LPH41_RS08365;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_038270574.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1946326 1948338 . + . ID=gene-LPH41_RS08370;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LPH41_RS08370;old_locus_tag=LPH41_08370 NZ_CP087680.1 Protein Homology CDS 1946326 1948338 . + 0 ID=cds-WP_038270506.1;Parent=gene-LPH41_RS08370;Dbxref=Genbank:WP_038270506.1;Name=WP_038270506.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010342098.1;locus_tag=LPH41_RS08370;product=excinuclease ABC subunit UvrB;protein_id=WP_038270506.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1948448 1948522 . + . ID=gene-LPH41_RS08375;Name=LPH41_RS08375;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS08375;old_locus_tag=LPH41_08375 NZ_CP087680.1 tRNAscan-SE tRNA 1948448 1948522 . + . ID=rna-LPH41_RS08375;Parent=gene-LPH41_RS08375;anticodon=(pos:1948480..1948482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08375;product=tRNA-Val NZ_CP087680.1 tRNAscan-SE exon 1948448 1948522 . + . ID=exon-LPH41_RS08375-1;Parent=rna-LPH41_RS08375;anticodon=(pos:1948480..1948482);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08375;product=tRNA-Val NZ_CP087680.1 RefSeq gene 1949401 1949613 . + . ID=gene-LPH41_RS08380;Name=LPH41_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08380;old_locus_tag=LPH41_08380 NZ_CP087680.1 GeneMarkS-2+ CDS 1949401 1949613 . + 0 ID=cds-WP_038270507.1;Parent=gene-LPH41_RS08380;Dbxref=Genbank:WP_038270507.1;Name=WP_038270507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08380;product=hypothetical protein;protein_id=WP_038270507.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1950331 1950804 . - . ID=gene-LPH41_RS08385;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LPH41_RS08385;old_locus_tag=LPH41_08385 NZ_CP087680.1 Protein Homology CDS 1950331 1950804 . - 0 ID=cds-WP_038270508.1;Parent=gene-LPH41_RS08385;Dbxref=Genbank:WP_038270508.1;Name=WP_038270508.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086621.1;locus_tag=LPH41_RS08385;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_038270508.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1951035 1953821 . + . ID=gene-LPH41_RS08390;Name=LPH41_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08390;old_locus_tag=LPH41_08390 NZ_CP087680.1 Protein Homology CDS 1951035 1953821 . + 0 ID=cds-WP_230439275.1;Parent=gene-LPH41_RS08390;Dbxref=Genbank:WP_230439275.1;Name=WP_230439275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089937.1;locus_tag=LPH41_RS08390;product=TonB-dependent receptor;protein_id=WP_230439275.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1954639 1955163 . - . ID=gene-LPH41_RS08395;Name=LPH41_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08395;old_locus_tag=LPH41_08395 NZ_CP087680.1 Protein Homology CDS 1954639 1955163 . - 0 ID=cds-WP_038270510.1;Parent=gene-LPH41_RS08395;Dbxref=Genbank:WP_038270510.1;Name=WP_038270510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851646.1;locus_tag=LPH41_RS08395;product=disulfide bond formation protein B;protein_id=WP_038270510.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1956639 1957760 . - . ID=gene-LPH41_RS08400;Name=LPH41_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08400;old_locus_tag=LPH41_08400 NZ_CP087680.1 Protein Homology CDS 1956639 1957760 . - 0 ID=cds-WP_230439276.1;Parent=gene-LPH41_RS08400;Dbxref=Genbank:WP_230439276.1;Name=WP_230439276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171142.1;locus_tag=LPH41_RS08400;product=OmpA family protein;protein_id=WP_230439276.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1961182 1962567 . - . ID=gene-LPH41_RS08405;Name=LPH41_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08405;old_locus_tag=LPH41_08405 NZ_CP087680.1 Protein Homology CDS 1961182 1962567 . - 0 ID=cds-WP_038270513.1;Parent=gene-LPH41_RS08405;Dbxref=Genbank:WP_038270513.1;Name=WP_038270513.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466154.1;locus_tag=LPH41_RS08405;product=FAD-binding protein;protein_id=WP_038270513.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1963764 1963949 . - . ID=gene-LPH41_RS08410;Name=LPH41_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08410;old_locus_tag=LPH41_08410 NZ_CP087680.1 GeneMarkS-2+ CDS 1963764 1963949 . - 0 ID=cds-WP_038270515.1;Parent=gene-LPH41_RS08410;Dbxref=Genbank:WP_038270515.1;Name=WP_038270515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08410;product=hypothetical protein;protein_id=WP_038270515.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1964941 1967112 . + . ID=gene-LPH41_RS08415;Name=LPH41_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08415;old_locus_tag=LPH41_08415 NZ_CP087680.1 Protein Homology CDS 1964941 1967112 . + 0 ID=cds-WP_038270516.1;Parent=gene-LPH41_RS08415;Dbxref=Genbank:WP_038270516.1;Name=WP_038270516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269543.1;locus_tag=LPH41_RS08415;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_038270516.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1967394 1967777 . + . ID=gene-LPH41_RS08420;Name=LPH41_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08420;old_locus_tag=LPH41_08420 NZ_CP087680.1 Protein Homology CDS 1967394 1967777 . + 0 ID=cds-WP_038270517.1;Parent=gene-LPH41_RS08420;Dbxref=Genbank:WP_038270517.1;Name=WP_038270517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486159.1;locus_tag=LPH41_RS08420;product=RidA family protein;protein_id=WP_038270517.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1967785 1969941 . + . ID=gene-LPH41_RS08425;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LPH41_RS08425;old_locus_tag=LPH41_08425 NZ_CP087680.1 Protein Homology CDS 1967785 1969941 . + 0 ID=cds-WP_230439277.1;Parent=gene-LPH41_RS08425;Dbxref=Genbank:WP_230439277.1;Name=WP_230439277.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300815.1;locus_tag=LPH41_RS08425;product=ATP-dependent DNA helicase RecG;protein_id=WP_230439277.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1971040 1972248 . + . ID=gene-LPH41_RS08430;Name=LPH41_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08430;old_locus_tag=LPH41_08430 NZ_CP087680.1 Protein Homology CDS 1971040 1972248 . + 0 ID=cds-WP_038270519.1;Parent=gene-LPH41_RS08430;Dbxref=Genbank:WP_038270519.1;Name=WP_038270519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086591.1;locus_tag=LPH41_RS08430;product=cytochrome P450;protein_id=WP_038270519.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1973043 1974659 . - . ID=gene-LPH41_RS08435;Name=LPH41_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08435;old_locus_tag=LPH41_08435 NZ_CP087680.1 Protein Homology CDS 1973043 1974659 . - 0 ID=cds-WP_051482258.1;Parent=gene-LPH41_RS08435;Dbxref=Genbank:WP_051482258.1;Name=WP_051482258.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535821.1;locus_tag=LPH41_RS08435;product=phosphoethanolamine--lipid A transferase;protein_id=WP_051482258.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1974695 1975453 . - . ID=gene-LPH41_RS08440;Name=LPH41_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08440;old_locus_tag=LPH41_08440 NZ_CP087680.1 Protein Homology CDS 1974695 1975453 . - 0 ID=cds-WP_038270521.1;Parent=gene-LPH41_RS08440;Dbxref=Genbank:WP_038270521.1;Name=WP_038270521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852112.1;locus_tag=LPH41_RS08440;product=phosphatase PAP2 family protein;protein_id=WP_038270521.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1976637 1978505 . - . ID=gene-LPH41_RS08445;Name=LPH41_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08445;old_locus_tag=LPH41_08445 NZ_CP087680.1 Protein Homology CDS 1976637 1978505 . - 0 ID=cds-WP_171898060.1;Parent=gene-LPH41_RS08445;Dbxref=Genbank:WP_171898060.1;Name=WP_171898060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911884.1;locus_tag=LPH41_RS08445;product=type IV pilus secretin PilQ family protein;protein_id=WP_171898060.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1978529 1979059 . - . ID=gene-LPH41_RS08450;Name=LPH41_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08450;old_locus_tag=LPH41_08450 NZ_CP087680.1 Protein Homology CDS 1978529 1979059 . - 0 ID=cds-WP_038270523.1;Parent=gene-LPH41_RS08450;Dbxref=Genbank:WP_038270523.1;Name=WP_038270523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086595.1;locus_tag=LPH41_RS08450;product=pilus assembly protein PilP;protein_id=WP_038270523.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1979056 1979724 . - . ID=gene-LPH41_RS08455;Name=LPH41_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08455;old_locus_tag=LPH41_08455 NZ_CP087680.1 Protein Homology CDS 1979056 1979724 . - 0 ID=cds-WP_038270524.1;Parent=gene-LPH41_RS08455;Dbxref=Genbank:WP_038270524.1;Name=WP_038270524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089909.1;locus_tag=LPH41_RS08455;product=type 4a pilus biogenesis protein PilO;protein_id=WP_038270524.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1979724 1980401 . - . ID=gene-LPH41_RS08460;Name=LPH41_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08460;old_locus_tag=LPH41_08460 NZ_CP087680.1 Protein Homology CDS 1979724 1980401 . - 0 ID=cds-WP_038270525.1;Parent=gene-LPH41_RS08460;Dbxref=Genbank:WP_038270525.1;Name=WP_038270525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089910.1;locus_tag=LPH41_RS08460;product=PilN domain-containing protein;protein_id=WP_038270525.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1980401 1981483 . - . ID=gene-LPH41_RS08465;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=LPH41_RS08465;old_locus_tag=LPH41_08465 NZ_CP087680.1 Protein Homology CDS 1980401 1981483 . - 0 ID=cds-WP_171898059.1;Parent=gene-LPH41_RS08465;Dbxref=Genbank:WP_171898059.1;Name=WP_171898059.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilM;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974443.1;locus_tag=LPH41_RS08465;product=type IV pilus assembly protein PilM;protein_id=WP_171898059.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1981701 1984130 . + . ID=gene-LPH41_RS08470;Name=LPH41_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08470;old_locus_tag=LPH41_08470 NZ_CP087680.1 Protein Homology CDS 1981701 1984130 . + 0 ID=cds-WP_038270527.1;Parent=gene-LPH41_RS08470;Dbxref=Genbank:WP_038270527.1;Name=WP_038270527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812411.1;locus_tag=LPH41_RS08470;product=penicillin-binding protein 1A;protein_id=WP_038270527.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1985748 1986719 . - . ID=gene-LPH41_RS08475;Name=LPH41_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08475;old_locus_tag=LPH41_08475 NZ_CP087680.1 Protein Homology CDS 1985748 1986719 . - 0 ID=cds-WP_038270528.1;Parent=gene-LPH41_RS08475;Dbxref=Genbank:WP_038270528.1;Name=WP_038270528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338044.1;locus_tag=LPH41_RS08475;product=aldo/keto reductase;protein_id=WP_038270528.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1987250 1988203 . + . ID=gene-LPH41_RS08480;Name=LPH41_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08480;old_locus_tag=LPH41_08480 NZ_CP087680.1 Protein Homology CDS 1987250 1988203 . + 0 ID=cds-WP_038270529.1;Parent=gene-LPH41_RS08480;Dbxref=Genbank:WP_038270529.1;Name=WP_038270529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089916.1;locus_tag=LPH41_RS08480;product=ribokinase;protein_id=WP_038270529.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1990628 1991350 . - . ID=gene-LPH41_RS08485;Name=LPH41_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08485;old_locus_tag=LPH41_08485 NZ_CP087680.1 Protein Homology CDS 1990628 1991350 . - 0 ID=cds-WP_051482259.1;Parent=gene-LPH41_RS08485;Dbxref=Genbank:WP_051482259.1;Name=WP_051482259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089919.1;locus_tag=LPH41_RS08485;product=OmpA family protein;protein_id=WP_051482259.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1991878 1993293 . - . ID=gene-LPH41_RS08490;Name=LPH41_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08490;old_locus_tag=LPH41_08490 NZ_CP087680.1 Protein Homology CDS 1991878 1993293 . - 0 ID=cds-WP_038270576.1;Parent=gene-LPH41_RS08490;Dbxref=Genbank:WP_038270576.1;Name=WP_038270576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086603.1;locus_tag=LPH41_RS08490;product=replicative DNA helicase;protein_id=WP_038270576.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1993799 1993975 . - . ID=gene-LPH41_RS08495;Name=LPH41_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08495;old_locus_tag=LPH41_08495 NZ_CP087680.1 GeneMarkS-2+ CDS 1993799 1993975 . - 0 ID=cds-WP_160165133.1;Parent=gene-LPH41_RS08495;Dbxref=Genbank:WP_160165133.1;Name=WP_160165133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08495;product=hypothetical protein;protein_id=WP_160165133.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1994637 1995122 . + . ID=gene-LPH41_RS08500;Name=LPH41_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08500;old_locus_tag=LPH41_08500 NZ_CP087680.1 GeneMarkS-2+ CDS 1994637 1995122 . + 0 ID=cds-WP_038270530.1;Parent=gene-LPH41_RS08500;Dbxref=Genbank:WP_038270530.1;Name=WP_038270530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08500;product=hypothetical protein;protein_id=WP_038270530.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1995138 1995398 . + . ID=gene-LPH41_RS08505;Name=LPH41_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08505;old_locus_tag=LPH41_08505 NZ_CP087680.1 GeneMarkS-2+ CDS 1995138 1995398 . + 0 ID=cds-WP_038270531.1;Parent=gene-LPH41_RS08505;Dbxref=Genbank:WP_038270531.1;Name=WP_038270531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08505;product=hypothetical protein;protein_id=WP_038270531.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1996447 1997691 . - . ID=gene-LPH41_RS08510;Name=LPH41_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08510;old_locus_tag=LPH41_08510 NZ_CP087680.1 Protein Homology CDS 1996447 1997691 . - 0 ID=cds-WP_114867225.1;Parent=gene-LPH41_RS08510;Dbxref=Genbank:WP_114867225.1;Name=WP_114867225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892891.1;locus_tag=LPH41_RS08510;product=alpha/beta hydrolase;protein_id=WP_114867225.1;transl_table=11 NZ_CP087680.1 RefSeq gene 1998432 1999700 . - . ID=gene-LPH41_RS08515;Name=LPH41_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08515;old_locus_tag=LPH41_08515 NZ_CP087680.1 Protein Homology CDS 1998432 1999700 . - 0 ID=cds-WP_038270533.1;Parent=gene-LPH41_RS08515;Dbxref=Genbank:WP_038270533.1;Name=WP_038270533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089920.1;locus_tag=LPH41_RS08515;product=lipase;protein_id=WP_038270533.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2001305 2002534 . - . ID=gene-LPH41_RS08520;Name=LPH41_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08520;old_locus_tag=LPH41_08520 NZ_CP087680.1 Protein Homology CDS 2001305 2002534 . - 0 ID=cds-WP_038270535.1;Parent=gene-LPH41_RS08520;Dbxref=Genbank:WP_038270535.1;Name=WP_038270535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086591.1;locus_tag=LPH41_RS08520;product=cytochrome P450;protein_id=WP_038270535.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2003319 2003480 . + . ID=gene-LPH41_RS08525;Name=LPH41_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08525;old_locus_tag=LPH41_08525 NZ_CP087680.1 GeneMarkS-2+ CDS 2003319 2003480 . + 0 ID=cds-WP_160165135.1;Parent=gene-LPH41_RS08525;Dbxref=Genbank:WP_160165135.1;Name=WP_160165135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08525;product=hypothetical protein;protein_id=WP_160165135.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2004026 2004640 . - . ID=gene-LPH41_RS08530;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LPH41_RS08530;old_locus_tag=LPH41_08530 NZ_CP087680.1 Protein Homology CDS 2004026 2004640 . - 0 ID=cds-WP_038270537.1;Parent=gene-LPH41_RS08530;Dbxref=Genbank:WP_038270537.1;Name=WP_038270537.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852106.1;locus_tag=LPH41_RS08530;product=thiamine phosphate synthase;protein_id=WP_038270537.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2004718 2004909 . + . ID=gene-LPH41_RS08535;Name=LPH41_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08535;old_locus_tag=LPH41_08535 NZ_CP087680.1 Protein Homology CDS 2004718 2004909 . + 0 ID=cds-WP_038270538.1;Parent=gene-LPH41_RS08535;Dbxref=Genbank:WP_038270538.1;Name=WP_038270538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338043.1;locus_tag=LPH41_RS08535;product=rubredoxin;protein_id=WP_038270538.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2005035 2005265 . - . ID=gene-LPH41_RS08540;Name=LPH41_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08540;old_locus_tag=LPH41_08540 NZ_CP087680.1 GeneMarkS-2+ CDS 2005035 2005265 . - 0 ID=cds-WP_152536580.1;Parent=gene-LPH41_RS08540;Dbxref=Genbank:WP_152536580.1;Name=WP_152536580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08540;product=hypothetical protein;protein_id=WP_152536580.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2005599 2008184 . + . ID=gene-LPH41_RS08545;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LPH41_RS08545;old_locus_tag=LPH41_08545 NZ_CP087680.1 Protein Homology CDS 2005599 2008184 . + 0 ID=cds-WP_038270539.1;Parent=gene-LPH41_RS08545;Dbxref=Genbank:WP_038270539.1;Name=WP_038270539.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892912.1;locus_tag=LPH41_RS08545;product=ATP-dependent chaperone ClpB;protein_id=WP_038270539.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2008986 2009168 . - . ID=gene-LPH41_RS08550;Name=LPH41_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08550;old_locus_tag=LPH41_08550 NZ_CP087680.1 Protein Homology CDS 2008986 2009168 . - 0 ID=cds-WP_081755402.1;Parent=gene-LPH41_RS08550;Dbxref=Genbank:WP_081755402.1;Name=WP_081755402.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487537.1;locus_tag=LPH41_RS08550;product=30S ribosomal protein THX;protein_id=WP_081755402.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2009304 2009714 . - . ID=gene-LPH41_RS08555;Name=LPH41_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08555;old_locus_tag=LPH41_08555 NZ_CP087680.1 Protein Homology CDS 2009304 2009714 . - 0 ID=cds-WP_038270578.1;Parent=gene-LPH41_RS08555;Dbxref=Genbank:WP_038270578.1;Name=WP_038270578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852104.1;locus_tag=LPH41_RS08555;product=MerC domain-containing protein;protein_id=WP_038270578.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2009871 2011916 . + . ID=gene-LPH41_RS08560;Name=LPH41_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08560;old_locus_tag=LPH41_08560 NZ_CP087680.1 Protein Homology CDS 2009871 2011916 . + 0 ID=cds-WP_038270540.1;Parent=gene-LPH41_RS08560;Dbxref=Genbank:WP_038270540.1;Name=WP_038270540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852444.1;locus_tag=LPH41_RS08560;product=TonB-dependent receptor;protein_id=WP_038270540.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2015229 2016239 . + . ID=gene-LPH41_RS08565;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LPH41_RS08565;old_locus_tag=LPH41_08565 NZ_CP087680.1 Protein Homology CDS 2015229 2016239 . + 0 ID=cds-WP_038270542.1;Parent=gene-LPH41_RS08565;Dbxref=Genbank:WP_038270542.1;Name=WP_038270542.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083629.1;locus_tag=LPH41_RS08565;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_038270542.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2016458 2016829 . + . ID=gene-LPH41_RS08570;Name=LPH41_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08570;old_locus_tag=LPH41_08570 NZ_CP087680.1 Protein Homology CDS 2016458 2016829 . + 0 ID=cds-WP_038270543.1;Parent=gene-LPH41_RS08570;Dbxref=Genbank:WP_038270543.1;Name=WP_038270543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083628.1;locus_tag=LPH41_RS08570;product=hypothetical protein;protein_id=WP_038270543.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2016920 2017603 . + . ID=gene-LPH41_RS08575;Name=LPH41_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08575;old_locus_tag=LPH41_08575 NZ_CP087680.1 Protein Homology CDS 2016920 2017603 . + 0 ID=cds-WP_038270544.1;Parent=gene-LPH41_RS08575;Dbxref=Genbank:WP_038270544.1;Name=WP_038270544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917079.1;locus_tag=LPH41_RS08575;product=response regulator transcription factor;protein_id=WP_038270544.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2017619 2019067 . + . ID=gene-LPH41_RS08580;Name=LPH41_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08580;old_locus_tag=LPH41_08580 NZ_CP087680.1 Protein Homology CDS 2017619 2019067 . + 0 ID=cds-WP_051482260.1;Parent=gene-LPH41_RS08580;Dbxref=Genbank:WP_051482260.1;Name=WP_051482260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852808.1;locus_tag=LPH41_RS08580;product=ATP-binding protein;protein_id=WP_051482260.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2020098 2020313 . + . ID=gene-LPH41_RS08585;Name=LPH41_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08585;old_locus_tag=LPH41_08585 NZ_CP087680.1 GeneMarkS-2+ CDS 2020098 2020313 . + 0 ID=cds-WP_038270546.1;Parent=gene-LPH41_RS08585;Dbxref=Genbank:WP_038270546.1;Name=WP_038270546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08585;product=hypothetical protein;protein_id=WP_038270546.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2022695 2023906 . + . ID=gene-LPH41_RS08590;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LPH41_RS08590;old_locus_tag=LPH41_08590 NZ_CP087680.1 Protein Homology CDS 2022695 2023906 . + 0 ID=cds-WP_038270548.1;Parent=gene-LPH41_RS08590;Dbxref=Genbank:WP_038270548.1;Name=WP_038270548.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083625.1;locus_tag=LPH41_RS08590;product=methionine adenosyltransferase;protein_id=WP_038270548.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2024445 2024519 . - . ID=gene-LPH41_RS08595;Name=LPH41_RS08595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS08595;old_locus_tag=LPH41_08595 NZ_CP087680.1 tRNAscan-SE tRNA 2024445 2024519 . - . ID=rna-LPH41_RS08595;Parent=gene-LPH41_RS08595;anticodon=(pos:complement(2024485..2024487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08595;product=tRNA-Gln NZ_CP087680.1 tRNAscan-SE exon 2024445 2024519 . - . ID=exon-LPH41_RS08595-1;Parent=rna-LPH41_RS08595;anticodon=(pos:complement(2024485..2024487));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08595;product=tRNA-Gln NZ_CP087680.1 RefSeq gene 2024573 2024649 . - . ID=gene-LPH41_RS08600;Name=LPH41_RS08600;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS08600;old_locus_tag=LPH41_08600 NZ_CP087680.1 tRNAscan-SE tRNA 2024573 2024649 . - . ID=rna-LPH41_RS08600;Parent=gene-LPH41_RS08600;anticodon=(pos:complement(2024613..2024615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08600;product=tRNA-Met NZ_CP087680.1 tRNAscan-SE exon 2024573 2024649 . - . ID=exon-LPH41_RS08600-1;Parent=rna-LPH41_RS08600;anticodon=(pos:complement(2024613..2024615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08600;product=tRNA-Met NZ_CP087680.1 RefSeq pseudogene 2024695 2025288 . + . ID=gene-LPH41_RS08605;Name=LPH41_RS08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08605;old_locus_tag=LPH41_08605;pseudo=true NZ_CP087680.1 Protein Homology CDS 2024695 2025288 . + 0 ID=cds-LPH41_RS08605;Parent=gene-LPH41_RS08605;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083624.1;locus_tag=LPH41_RS08605;product=RNA pyrophosphohydrolase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2025433 2025660 . + . ID=gene-LPH41_RS08610;Name=LPH41_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08610;old_locus_tag=LPH41_08610 NZ_CP087680.1 Protein Homology CDS 2025433 2025660 . + 0 ID=cds-WP_171898093.1;Parent=gene-LPH41_RS08610;Dbxref=Genbank:WP_171898093.1;Name=WP_171898093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892924.1;locus_tag=LPH41_RS08610;product=(2Fe-2S)-binding protein;protein_id=WP_171898093.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2025742 2026212 . + . ID=gene-LPH41_RS08615;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LPH41_RS08615;old_locus_tag=LPH41_08615 NZ_CP087680.1 Protein Homology CDS 2025742 2026212 . + 0 ID=cds-WP_038270549.1;Parent=gene-LPH41_RS08615;Dbxref=Genbank:WP_038270549.1;Name=WP_038270549.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808230.1;locus_tag=LPH41_RS08615;product=bacterioferritin;protein_id=WP_038270549.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2026214 2027233 . - . ID=gene-LPH41_RS08620;Name=LPH41_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08620;old_locus_tag=LPH41_08620 NZ_CP087680.1 Protein Homology CDS 2026214 2027233 . - 0 ID=cds-WP_230428243.1;Parent=gene-LPH41_RS08620;Dbxref=Genbank:WP_230428243.1;Name=WP_230428243.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=LPH41_RS08620;product=response regulator;protein_id=WP_230428243.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2027293 2028240 . - . ID=gene-LPH41_RS08625;Name=LPH41_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08625;old_locus_tag=LPH41_08625 NZ_CP087680.1 Protein Homology CDS 2027293 2028240 . - 0 ID=cds-WP_230428508.1;Parent=gene-LPH41_RS08625;Dbxref=Genbank:WP_230428508.1;Name=WP_230428508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LPH41_RS08625;product=ATP-binding protein;protein_id=WP_230428508.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2028543 2030201 . - . ID=gene-LPH41_RS08630;Name=LPH41_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08630;old_locus_tag=LPH41_08630 NZ_CP087680.1 Protein Homology CDS 2028543 2030201 . - 0 ID=cds-WP_051482267.1;Parent=gene-LPH41_RS08630;Dbxref=Genbank:WP_051482267.1;Name=WP_051482267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382723.1;locus_tag=LPH41_RS08630;product=EAL domain-containing response regulator;protein_id=WP_051482267.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2031191 2031868 . + . ID=gene-LPH41_RS08635;Name=LPH41_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08635;old_locus_tag=LPH41_08635 NZ_CP087680.1 Protein Homology CDS 2031191 2031868 . + 0 ID=cds-WP_230428298.1;Parent=gene-LPH41_RS08635;Dbxref=Genbank:WP_230428298.1;Name=WP_230428298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607439.1;locus_tag=LPH41_RS08635;product=hypothetical protein;protein_id=WP_230428298.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2031870 2032304 . + . ID=gene-LPH41_RS08640;Name=LPH41_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08640;old_locus_tag=LPH41_08640 NZ_CP087680.1 Protein Homology CDS 2031870 2032304 . + 0 ID=cds-WP_038270551.1;Parent=gene-LPH41_RS08640;Dbxref=Genbank:WP_038270551.1;Name=WP_038270551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851837.1;locus_tag=LPH41_RS08640;product=polymer-forming cytoskeletal protein;protein_id=WP_038270551.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2032338 2032724 . + . ID=gene-LPH41_RS08645;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LPH41_RS08645;old_locus_tag=LPH41_08645 NZ_CP087680.1 Protein Homology CDS 2032338 2032724 . + 0 ID=cds-WP_038270552.1;Parent=gene-LPH41_RS08645;Dbxref=Genbank:WP_038270552.1;Name=WP_038270552.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411302.1;locus_tag=LPH41_RS08645;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_038270552.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2032886 2033029 . - . ID=gene-LPH41_RS08650;Name=LPH41_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08650;old_locus_tag=LPH41_08650 NZ_CP087680.1 GeneMarkS-2+ CDS 2032886 2033029 . - 0 ID=cds-WP_205395217.1;Parent=gene-LPH41_RS08650;Dbxref=Genbank:WP_205395217.1;Name=WP_205395217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08650;product=hypothetical protein;protein_id=WP_205395217.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2033346 2034974 . + . ID=gene-LPH41_RS08655;Name=LPH41_RS08655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08655;old_locus_tag=LPH41_08655;pseudo=true NZ_CP087680.1 Protein Homology CDS 2033346 2034974 . + 0 ID=cds-LPH41_RS08655;Parent=gene-LPH41_RS08655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019463570.1;locus_tag=LPH41_RS08655;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2035171 2036258 . + . ID=gene-LPH41_RS08660;Name=LPH41_RS08660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08660;old_locus_tag=LPH41_08660;pseudo=true NZ_CP087680.1 Protein Homology CDS 2035171 2036258 . + 0 ID=cds-LPH41_RS08660;Parent=gene-LPH41_RS08660;Note=frameshifted%3B internal stop;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091577.1;locus_tag=LPH41_RS08660;product=glycerophosphodiester phosphodiesterase family protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2037788 2038744 . - . ID=gene-LPH41_RS08665;Name=LPH41_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08665;old_locus_tag=LPH41_08665 NZ_CP087680.1 Protein Homology CDS 2037788 2038744 . - 0 ID=cds-WP_038270555.1;Parent=gene-LPH41_RS08665;Dbxref=Genbank:WP_038270555.1;Name=WP_038270555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449013.1;locus_tag=LPH41_RS08665;product=TerC family protein;protein_id=WP_038270555.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2039017 2040186 . + . ID=gene-LPH41_RS08670;Name=LPH41_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08670;old_locus_tag=LPH41_08670 NZ_CP087680.1 Protein Homology CDS 2039017 2040186 . + 0 ID=cds-WP_038270556.1;Parent=gene-LPH41_RS08670;Dbxref=Genbank:WP_038270556.1;Name=WP_038270556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264547.1;locus_tag=LPH41_RS08670;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_038270556.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2040155 2040349 . - . ID=gene-LPH41_RS08675;Name=LPH41_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08675;old_locus_tag=LPH41_08675 NZ_CP087680.1 GeneMarkS-2+ CDS 2040155 2040349 . - 0 ID=cds-WP_152536581.1;Parent=gene-LPH41_RS08675;Dbxref=Genbank:WP_152536581.1;Name=WP_152536581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08675;product=hypothetical protein;protein_id=WP_152536581.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2040419 2041852 . - . ID=gene-LPH41_RS08680;Name=LPH41_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08680;old_locus_tag=LPH41_08680 NZ_CP087680.1 Protein Homology CDS 2040419 2041852 . - 0 ID=cds-WP_038270582.1;Parent=gene-LPH41_RS08680;Dbxref=Genbank:WP_038270582.1;Name=WP_038270582.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892938.1;locus_tag=LPH41_RS08680;product=amino acid permease;protein_id=WP_038270582.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2042309 2042506 . - . ID=gene-LPH41_RS08685;Name=LPH41_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08685;old_locus_tag=LPH41_08685 NZ_CP087680.1 GeneMarkS-2+ CDS 2042309 2042506 . - 0 ID=cds-WP_160165136.1;Parent=gene-LPH41_RS08685;Dbxref=Genbank:WP_160165136.1;Name=WP_160165136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08685;product=hypothetical protein;protein_id=WP_160165136.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2042620 2044377 . + . ID=gene-LPH41_RS08690;Name=LPH41_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08690;old_locus_tag=LPH41_08690 NZ_CP087680.1 Protein Homology CDS 2042620 2044377 . + 0 ID=cds-WP_038270558.1;Parent=gene-LPH41_RS08690;Dbxref=Genbank:WP_038270558.1;Name=WP_038270558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098200.1;locus_tag=LPH41_RS08690;product=ABC transporter permease subunit;protein_id=WP_038270558.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2044409 2045710 . + . ID=gene-LPH41_RS08695;Name=LPH41_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08695;old_locus_tag=LPH41_08695 NZ_CP087680.1 Protein Homology CDS 2044409 2045710 . + 0 ID=cds-WP_038270559.1;Parent=gene-LPH41_RS08695;Dbxref=Genbank:WP_038270559.1;Name=WP_038270559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892942.1;locus_tag=LPH41_RS08695;product=AAA-associated domain-containing protein;protein_id=WP_038270559.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2046090 2047460 . + . ID=gene-LPH41_RS08700;Name=LPH41_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08700;old_locus_tag=LPH41_08700 NZ_CP087680.1 Protein Homology CDS 2046090 2047460 . + 0 ID=cds-WP_038270560.1;Parent=gene-LPH41_RS08700;Dbxref=Genbank:WP_038270560.1;Name=WP_038270560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851830.1;locus_tag=LPH41_RS08700;product=DNA recombination protein RmuC;protein_id=WP_038270560.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2048189 2049223 . - . ID=gene-LPH41_RS08705;Name=LPH41_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08705;old_locus_tag=LPH41_08705 NZ_CP087680.1 Protein Homology CDS 2048189 2049223 . - 0 ID=cds-WP_038270561.1;Parent=gene-LPH41_RS08705;Dbxref=Genbank:WP_038270561.1;Name=WP_038270561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089845.1;locus_tag=LPH41_RS08705;product=VacJ family lipoprotein;protein_id=WP_038270561.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2049238 2049540 . - . ID=gene-LPH41_RS08710;Name=LPH41_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08710;old_locus_tag=LPH41_08710 NZ_CP087680.1 Protein Homology CDS 2049238 2049540 . - 0 ID=cds-WP_038270562.1;Parent=gene-LPH41_RS08710;Dbxref=Genbank:WP_038270562.1;Name=WP_038270562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083609.1;locus_tag=LPH41_RS08710;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_038270562.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2049530 2050186 . - . ID=gene-LPH41_RS08715;Name=LPH41_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08715;old_locus_tag=LPH41_08715 NZ_CP087680.1 Protein Homology CDS 2049530 2050186 . - 0 ID=cds-WP_038270563.1;Parent=gene-LPH41_RS08715;Dbxref=Genbank:WP_038270563.1;Name=WP_038270563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851828.1;locus_tag=LPH41_RS08715;product=phospholipid-binding protein MlaC;protein_id=WP_038270563.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2050183 2050719 . - . ID=gene-LPH41_RS08720;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LPH41_RS08720;old_locus_tag=LPH41_08720 NZ_CP087680.1 Protein Homology CDS 2050183 2050719 . - 0 ID=cds-WP_038270564.1;Parent=gene-LPH41_RS08720;Dbxref=Genbank:WP_038270564.1;Name=WP_038270564.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851827.1;locus_tag=LPH41_RS08720;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_038270564.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2050844 2051593 . - . ID=gene-LPH41_RS08725;Name=LPH41_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08725;old_locus_tag=LPH41_08725 NZ_CP087680.1 Protein Homology CDS 2050844 2051593 . - 0 ID=cds-WP_038270565.1;Parent=gene-LPH41_RS08725;Dbxref=Genbank:WP_038270565.1;Name=WP_038270565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302478.1;locus_tag=LPH41_RS08725;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_038270565.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2051593 2052387 . - . ID=gene-LPH41_RS08730;Name=LPH41_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08730;old_locus_tag=LPH41_08730 NZ_CP087680.1 Protein Homology CDS 2051593 2052387 . - 0 ID=cds-WP_038270567.1;Parent=gene-LPH41_RS08730;Dbxref=Genbank:WP_038270567.1;Name=WP_038270567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089839.1;locus_tag=LPH41_RS08730;product=ABC transporter ATP-binding protein;protein_id=WP_038270567.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2052630 2055980 . + . ID=gene-LPH41_RS08735;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LPH41_RS08735;old_locus_tag=LPH41_08735 NZ_CP087680.1 Protein Homology CDS 2052630 2055980 . + 0 ID=cds-WP_038270568.1;Parent=gene-LPH41_RS08735;Dbxref=Genbank:WP_038270568.1;Name=WP_038270568.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851826.1;locus_tag=LPH41_RS08735;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_038270568.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2055977 2059711 . + . ID=gene-LPH41_RS08740;Name=LPH41_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08740;old_locus_tag=LPH41_08740 NZ_CP087680.1 Protein Homology CDS 2055977 2059711 . + 0 ID=cds-WP_230439278.1;Parent=gene-LPH41_RS08740;Dbxref=Genbank:WP_230439278.1;Name=WP_230439278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083603.1;locus_tag=LPH41_RS08740;product=exodeoxyribonuclease V subunit beta;protein_id=WP_230439278.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2059708 2061639 . + . ID=gene-LPH41_RS08745;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LPH41_RS08745;old_locus_tag=LPH41_08745 NZ_CP087680.1 Protein Homology CDS 2059708 2061639 . + 0 ID=cds-WP_038270331.1;Parent=gene-LPH41_RS08745;Dbxref=Genbank:WP_038270331.1;Name=WP_038270331.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851823.1;locus_tag=LPH41_RS08745;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_038270331.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2062381 2063673 . + . ID=gene-LPH41_RS08750;Name=LPH41_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08750;old_locus_tag=LPH41_08750 NZ_CP087680.1 Protein Homology CDS 2062381 2063673 . + 0 ID=cds-WP_038270333.1;Parent=gene-LPH41_RS08750;Dbxref=Genbank:WP_038270333.1;Name=WP_038270333.1;Ontology_term=GO:0006436,GO:0004830;gbkey=CDS;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089825.1;locus_tag=LPH41_RS08750;product=tryptophan--tRNA ligase;protein_id=WP_038270333.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2064058 2064210 . + . ID=gene-LPH41_RS08755;Name=LPH41_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08755;old_locus_tag=LPH41_08755 NZ_CP087680.1 GeneMarkS-2+ CDS 2064058 2064210 . + 0 ID=cds-WP_160165119.1;Parent=gene-LPH41_RS08755;Dbxref=Genbank:WP_160165119.1;Name=WP_160165119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08755;product=hypothetical protein;protein_id=WP_160165119.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2064319 2066052 . - . ID=gene-LPH41_RS08760;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LPH41_RS08760;old_locus_tag=LPH41_08760 NZ_CP087680.1 Protein Homology CDS 2064319 2066052 . - 0 ID=cds-WP_038270334.1;Parent=gene-LPH41_RS08760;Dbxref=Genbank:WP_038270334.1;Name=WP_038270334.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083599.1;locus_tag=LPH41_RS08760;product=DNA primase;protein_id=WP_038270334.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2066270 2067199 . - . ID=gene-LPH41_RS08765;Name=LPH41_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08765;old_locus_tag=LPH41_08765 NZ_CP087680.1 Protein Homology CDS 2066270 2067199 . - 0 ID=cds-WP_230428241.1;Parent=gene-LPH41_RS08765;Dbxref=Genbank:WP_230428241.1;Name=WP_230428241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083598.1;locus_tag=LPH41_RS08765;product=YihY/virulence factor BrkB family protein;protein_id=WP_230428241.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2067454 2067900 . - . ID=gene-LPH41_RS08770;Name=LPH41_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08770;old_locus_tag=LPH41_08770 NZ_CP087680.1 Protein Homology CDS 2067454 2067900 . - 0 ID=cds-WP_038270335.1;Parent=gene-LPH41_RS08770;Dbxref=Genbank:WP_038270335.1;Name=WP_038270335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038898.1;locus_tag=LPH41_RS08770;product=GatB/YqeY domain-containing protein;protein_id=WP_038270335.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2068096 2068311 . - . ID=gene-LPH41_RS08775;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LPH41_RS08775;old_locus_tag=LPH41_08775 NZ_CP087680.1 Protein Homology CDS 2068096 2068311 . - 0 ID=cds-WP_038270336.1;Parent=gene-LPH41_RS08775;Dbxref=Genbank:WP_038270336.1;Name=WP_038270336.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=LPH41_RS08775;product=30S ribosomal protein S21;protein_id=WP_038270336.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2068483 2069538 . + . ID=gene-LPH41_RS08780;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LPH41_RS08780;old_locus_tag=LPH41_08780 NZ_CP087680.1 Protein Homology CDS 2068483 2069538 . + 0 ID=cds-WP_038270337.1;Parent=gene-LPH41_RS08780;Dbxref=Genbank:WP_038270337.1;Name=WP_038270337.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083595.1;locus_tag=LPH41_RS08780;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_038270337.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2069612 2069974 . + . ID=gene-LPH41_RS08785;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LPH41_RS08785;old_locus_tag=LPH41_08785 NZ_CP087680.1 Protein Homology CDS 2069612 2069974 . + 0 ID=cds-WP_038270338.1;Parent=gene-LPH41_RS08785;Dbxref=Genbank:WP_038270338.1;Name=WP_038270338.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996916.1;locus_tag=LPH41_RS08785;product=dihydroneopterin aldolase;protein_id=WP_038270338.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2070208 2071503 . + . ID=gene-LPH41_RS08790;Name=LPH41_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08790;old_locus_tag=LPH41_08790 NZ_CP087680.1 Protein Homology CDS 2070208 2071503 . + 0 ID=cds-WP_051482247.1;Parent=gene-LPH41_RS08790;Dbxref=Genbank:WP_051482247.1;Name=WP_051482247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083593.1;locus_tag=LPH41_RS08790;product=mechanosensitive ion channel family protein;protein_id=WP_051482247.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2072064 2074238 . + . ID=gene-LPH41_RS08795;Name=LPH41_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08795;old_locus_tag=LPH41_08795 NZ_CP087680.1 Protein Homology CDS 2072064 2074238 . + 0 ID=cds-WP_038270448.1;Parent=gene-LPH41_RS08795;Dbxref=Genbank:WP_038270448.1;Name=WP_038270448.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083592.1;locus_tag=LPH41_RS08795;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_038270448.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2074481 2074696 . + . ID=gene-LPH41_RS08800;Name=LPH41_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08800;old_locus_tag=LPH41_08800 NZ_CP087680.1 GeneMarkS-2+ CDS 2074481 2074696 . + 0 ID=cds-WP_152536570.1;Parent=gene-LPH41_RS08800;Dbxref=Genbank:WP_152536570.1;Name=WP_152536570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08800;product=hypothetical protein;protein_id=WP_152536570.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2075216 2075512 . + . ID=gene-LPH41_RS08805;Name=LPH41_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08805;old_locus_tag=LPH41_08805 NZ_CP087680.1 GeneMarkS-2+ CDS 2075216 2075512 . + 0 ID=cds-WP_230439279.1;Parent=gene-LPH41_RS08805;Dbxref=Genbank:WP_230439279.1;Name=WP_230439279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08805;product=hypothetical protein;protein_id=WP_230439279.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2076818 2077288 . - . ID=gene-LPH41_RS08810;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LPH41_RS08810;old_locus_tag=LPH41_08810 NZ_CP087680.1 Protein Homology CDS 2076818 2077288 . - 0 ID=cds-WP_038270341.1;Parent=gene-LPH41_RS08810;Dbxref=Genbank:WP_038270341.1;Name=WP_038270341.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089802.1;locus_tag=LPH41_RS08810;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_038270341.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2077289 2077702 . - . ID=gene-LPH41_RS08815;Name=LPH41_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08815;old_locus_tag=LPH41_08815 NZ_CP087680.1 Protein Homology CDS 2077289 2077702 . - 0 ID=cds-WP_230428240.1;Parent=gene-LPH41_RS08815;Dbxref=Genbank:WP_230428240.1;Name=WP_230428240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851198.1;locus_tag=LPH41_RS08815;product=hypothetical protein;protein_id=WP_230428240.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2077711 2078481 . - . ID=gene-LPH41_RS08820;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LPH41_RS08820;old_locus_tag=LPH41_08820 NZ_CP087680.1 Protein Homology CDS 2077711 2078481 . - 0 ID=cds-WP_038270343.1;Parent=gene-LPH41_RS08820;Dbxref=Genbank:WP_038270343.1;Name=WP_038270343.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083589.1;locus_tag=LPH41_RS08820;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_038270343.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2078642 2079013 . + . ID=gene-LPH41_RS08825;Name=LPH41_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08825;old_locus_tag=LPH41_08825 NZ_CP087680.1 Protein Homology CDS 2078642 2079013 . + 0 ID=cds-WP_038270345.1;Parent=gene-LPH41_RS08825;Dbxref=Genbank:WP_038270345.1;Name=WP_038270345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851197.1;locus_tag=LPH41_RS08825;product=DUF4124 domain-containing protein;protein_id=WP_038270345.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2079106 2080800 . + . ID=gene-LPH41_RS08830;Name=LPH41_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08830;old_locus_tag=LPH41_08830 NZ_CP087680.1 Protein Homology CDS 2079106 2080800 . + 0 ID=cds-WP_038270346.1;Parent=gene-LPH41_RS08830;Dbxref=Genbank:WP_038270346.1;Name=WP_038270346.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157647.1;locus_tag=LPH41_RS08830;product=proline--tRNA ligase;protein_id=WP_038270346.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2080949 2081320 . + . ID=gene-LPH41_RS08835;Name=LPH41_RS08835;end_range=2081320,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS08835;old_locus_tag=LPH41_08835;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 2080949 2081320 . + 0 ID=cds-LPH41_RS08835;Parent=gene-LPH41_RS08835;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=2081320,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970417.1;locus_tag=LPH41_RS08835;partial=true;product=H-NS family nucleoid-associated regulatory protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2082574 2082924 . + . ID=gene-LPH41_RS08840;Name=LPH41_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08840;old_locus_tag=LPH41_08840 NZ_CP087680.1 Protein Homology CDS 2082574 2082924 . + 0 ID=cds-WP_038270449.1;Parent=gene-LPH41_RS08840;Dbxref=Genbank:WP_038270449.1;Name=WP_038270449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083585.1;locus_tag=LPH41_RS08840;product=DMT family protein;protein_id=WP_038270449.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2084260 2084646 . - . ID=gene-LPH41_RS08845;Name=pilH;gbkey=Gene;gene=pilH;gene_biotype=protein_coding;locus_tag=LPH41_RS08845;old_locus_tag=LPH41_08845 NZ_CP087680.1 Protein Homology CDS 2084260 2084646 . - 0 ID=cds-WP_038270450.1;Parent=gene-LPH41_RS08845;Dbxref=Genbank:WP_038270450.1;Name=WP_038270450.1;gbkey=CDS;gene=pilH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083584.1;locus_tag=LPH41_RS08845;product=twitching motility response regulator PilH;protein_id=WP_038270450.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2084739 2085749 . - . ID=gene-LPH41_RS08850;Name=LPH41_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08850;old_locus_tag=LPH41_08850 NZ_CP087680.1 Protein Homology CDS 2084739 2085749 . - 0 ID=cds-WP_038270348.1;Parent=gene-LPH41_RS08850;Dbxref=Genbank:WP_038270348.1;Name=WP_038270348.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005418337.1;locus_tag=LPH41_RS08850;product=acryloyl-CoA reductase;protein_id=WP_038270348.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2085880 2087019 . + . ID=gene-LPH41_RS08855;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LPH41_RS08855;old_locus_tag=LPH41_08855 NZ_CP087680.1 Protein Homology CDS 2085880 2087019 . + 0 ID=cds-WP_038270349.1;Parent=gene-LPH41_RS08855;Dbxref=Genbank:WP_038270349.1;Name=WP_038270349.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851193.1;locus_tag=LPH41_RS08855;product=FtsH protease activity modulator HflK;protein_id=WP_038270349.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2087016 2087879 . + . ID=gene-LPH41_RS08860;Name=LPH41_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08860;old_locus_tag=LPH41_08860 NZ_CP087680.1 Protein Homology CDS 2087016 2087879 . + 0 ID=cds-WP_038270350.1;Parent=gene-LPH41_RS08860;Dbxref=Genbank:WP_038270350.1;Name=WP_038270350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083581.1;locus_tag=LPH41_RS08860;product=protease modulator HflC;protein_id=WP_038270350.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2088036 2088221 . + . ID=gene-LPH41_RS08865;Name=LPH41_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08865;old_locus_tag=LPH41_08865 NZ_CP087680.1 Protein Homology CDS 2088036 2088221 . + 0 ID=cds-WP_038270351.1;Parent=gene-LPH41_RS08865;Dbxref=Genbank:WP_038270351.1;Name=WP_038270351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089787.1;locus_tag=LPH41_RS08865;product=DUF2065 family protein;protein_id=WP_038270351.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2088445 2089737 . + . ID=gene-LPH41_RS08870;Name=LPH41_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08870;old_locus_tag=LPH41_08870 NZ_CP087680.1 Protein Homology CDS 2088445 2089737 . + 0 ID=cds-WP_038270352.1;Parent=gene-LPH41_RS08870;Dbxref=Genbank:WP_038270352.1;Name=WP_038270352.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903917.1;locus_tag=LPH41_RS08870;product=adenylosuccinate synthase;protein_id=WP_038270352.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2090623 2091627 . - . ID=gene-LPH41_RS08875;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LPH41_RS08875;old_locus_tag=LPH41_08875 NZ_CP087680.1 Protein Homology CDS 2090623 2091627 . - 0 ID=cds-WP_038270354.1;Parent=gene-LPH41_RS08875;Dbxref=Genbank:WP_038270354.1;Name=WP_038270354.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851191.1;locus_tag=LPH41_RS08875;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_038270354.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2094876 2095301 . + . ID=gene-LPH41_RS08880;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LPH41_RS08880;old_locus_tag=LPH41_08880 NZ_CP087680.1 Protein Homology CDS 2094876 2095301 . + 0 ID=cds-WP_038270355.1;Parent=gene-LPH41_RS08880;Dbxref=Genbank:WP_038270355.1;Name=WP_038270355.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1;locus_tag=LPH41_RS08880;product=nucleoside-diphosphate kinase;protein_id=WP_038270355.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2095312 2096526 . + . ID=gene-LPH41_RS08885;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LPH41_RS08885;old_locus_tag=LPH41_08885 NZ_CP087680.1 Protein Homology CDS 2095312 2096526 . + 0 ID=cds-WP_038270356.1;Parent=gene-LPH41_RS08885;Dbxref=Genbank:WP_038270356.1;Name=WP_038270356.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089782.1;locus_tag=LPH41_RS08885;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_038270356.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2096582 2097319 . + . ID=gene-LPH41_RS08890;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=LPH41_RS08890;old_locus_tag=LPH41_08890 NZ_CP087680.1 Protein Homology CDS 2096582 2097319 . + 0 ID=cds-WP_230428239.1;Parent=gene-LPH41_RS08890;Dbxref=Genbank:WP_230428239.1;Name=WP_230428239.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892988.1;locus_tag=LPH41_RS08890;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_230428239.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2097326 2098192 . + . ID=gene-LPH41_RS08895;Name=LPH41_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08895;old_locus_tag=LPH41_08895 NZ_CP087680.1 Protein Homology CDS 2097326 2098192 . + 0 ID=cds-WP_051482248.1;Parent=gene-LPH41_RS08895;Dbxref=Genbank:WP_051482248.1;Name=WP_051482248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083575.1;locus_tag=LPH41_RS08895;product=helix-turn-helix domain-containing protein;protein_id=WP_051482248.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2098269 2098907 . + . ID=gene-LPH41_RS08900;Name=LPH41_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08900;old_locus_tag=LPH41_08900 NZ_CP087680.1 Protein Homology CDS 2098269 2098907 . + 0 ID=cds-WP_038270358.1;Parent=gene-LPH41_RS08900;Dbxref=Genbank:WP_038270358.1;Name=WP_038270358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503367.1;locus_tag=LPH41_RS08900;product=YfgM family protein;protein_id=WP_038270358.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2098908 2100131 . + . ID=gene-LPH41_RS08905;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LPH41_RS08905;old_locus_tag=LPH41_08905 NZ_CP087680.1 Protein Homology CDS 2098908 2100131 . + 0 ID=cds-WP_038270359.1;Parent=gene-LPH41_RS08905;Dbxref=Genbank:WP_038270359.1;Name=WP_038270359.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083573.1;locus_tag=LPH41_RS08905;product=outer membrane protein assembly factor BamB;protein_id=WP_038270359.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2100149 2101549 . + . ID=gene-LPH41_RS08910;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LPH41_RS08910;old_locus_tag=LPH41_08910 NZ_CP087680.1 Protein Homology CDS 2100149 2101549 . + 0 ID=cds-WP_038270360.1;Parent=gene-LPH41_RS08910;Dbxref=Genbank:WP_038270360.1;Name=WP_038270360.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014160877.1;locus_tag=LPH41_RS08910;product=ribosome biogenesis GTPase Der;protein_id=WP_038270360.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2101770 2102909 . - . ID=gene-LPH41_RS08915;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=LPH41_RS08915;old_locus_tag=LPH41_08915 NZ_CP087680.1 Protein Homology CDS 2101770 2102909 . - 0 ID=cds-WP_038270362.1;Parent=gene-LPH41_RS08915;Dbxref=Genbank:WP_038270362.1;Name=WP_038270362.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851185.1;locus_tag=LPH41_RS08915;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_038270362.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2103599 2103745 . - . ID=gene-LPH41_RS08920;Name=LPH41_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08920;old_locus_tag=LPH41_08920 NZ_CP087680.1 GeneMarkS-2+ CDS 2103599 2103745 . - 0 ID=cds-WP_152536571.1;Parent=gene-LPH41_RS08920;Dbxref=Genbank:WP_152536571.1;Name=WP_152536571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08920;product=AlpA family phage regulatory protein;protein_id=WP_152536571.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2106932 2108488 . + . ID=gene-LPH41_RS08925;Name=LPH41_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08925;old_locus_tag=LPH41_08925 NZ_CP087680.1 Protein Homology CDS 2106932 2108488 . + 0 ID=cds-WP_038270368.1;Parent=gene-LPH41_RS08925;Dbxref=Genbank:WP_038270368.1;Name=WP_038270368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098186.1;locus_tag=LPH41_RS08925;product=EAL domain-containing protein;protein_id=WP_038270368.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2109989 2111362 . + . ID=gene-LPH41_RS08930;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=LPH41_RS08930;old_locus_tag=LPH41_08930 NZ_CP087680.1 Protein Homology CDS 2109989 2111362 . + 0 ID=cds-WP_038270452.1;Parent=gene-LPH41_RS08930;Dbxref=Genbank:WP_038270452.1;Name=WP_038270452.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083569.1;locus_tag=LPH41_RS08930;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_038270452.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2111546 2112019 . + . ID=gene-LPH41_RS08935;Name=LPH41_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08935;old_locus_tag=LPH41_08935 NZ_CP087680.1 Protein Homology CDS 2111546 2112019 . + 0 ID=cds-WP_230428237.1;Parent=gene-LPH41_RS08935;Dbxref=Genbank:WP_230428237.1;Name=WP_230428237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019337159.1;locus_tag=LPH41_RS08935;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_230428237.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2112073 2112498 . + . ID=gene-LPH41_RS08940;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LPH41_RS08940;old_locus_tag=LPH41_08940 NZ_CP087680.1 Protein Homology CDS 2112073 2112498 . + 0 ID=cds-WP_268980384.1;Parent=gene-LPH41_RS08940;Dbxref=Genbank:WP_268980384.1;Name=WP_268980384.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005408857.1;locus_tag=LPH41_RS08940;product=type IV pilus modification protein PilV;protein_id=WP_268980384.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2112495 2113751 . + . ID=gene-LPH41_RS08945;Name=LPH41_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08945;old_locus_tag=LPH41_08945 NZ_CP087680.1 Protein Homology CDS 2112495 2113751 . + 0 ID=cds-WP_038270371.1;Parent=gene-LPH41_RS08945;Dbxref=Genbank:WP_038270371.1;Name=WP_038270371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851179.1;locus_tag=LPH41_RS08945;product=PilW family protein;protein_id=WP_038270371.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2113754 2114245 . + . ID=gene-LPH41_RS08950;Name=LPH41_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08950;old_locus_tag=LPH41_08950 NZ_CP087680.1 Protein Homology CDS 2113754 2114245 . + 0 ID=cds-WP_230428235.1;Parent=gene-LPH41_RS08950;Dbxref=Genbank:WP_230428235.1;Name=WP_230428235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089766.1;locus_tag=LPH41_RS08950;product=PilX N-terminal domain-containing pilus assembly protein;protein_id=WP_230428235.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2114249 2118814 . + . ID=gene-LPH41_RS08955;Name=LPH41_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08955;old_locus_tag=LPH41_08955 NZ_CP087680.1 Protein Homology CDS 2114249 2118814 . + 0 ID=cds-WP_038270373.1;Parent=gene-LPH41_RS08955;Dbxref=Genbank:WP_038270373.1;Name=WP_038270373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338034.1;locus_tag=LPH41_RS08955;product=pilus assembly protein;protein_id=WP_038270373.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2118865 2119266 . + . ID=gene-LPH41_RS08960;Name=LPH41_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08960;old_locus_tag=LPH41_08960 NZ_CP087680.1 Protein Homology CDS 2118865 2119266 . + 0 ID=cds-WP_200866181.1;Parent=gene-LPH41_RS08960;Dbxref=Genbank:WP_200866181.1;Name=WP_200866181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382713.1;locus_tag=LPH41_RS08960;product=type IV pilin protein;protein_id=WP_200866181.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2119371 2119447 . + . ID=gene-LPH41_RS08965;Name=LPH41_RS08965;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS08965;old_locus_tag=LPH41_08965 NZ_CP087680.1 tRNAscan-SE tRNA 2119371 2119447 . + . ID=rna-LPH41_RS08965;Parent=gene-LPH41_RS08965;anticodon=(pos:2119405..2119407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08965;product=tRNA-Asn NZ_CP087680.1 tRNAscan-SE exon 2119371 2119447 . + . ID=exon-LPH41_RS08965-1;Parent=rna-LPH41_RS08965;anticodon=(pos:2119405..2119407);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS08965;product=tRNA-Asn NZ_CP087680.1 RefSeq gene 2119782 2120024 . + . ID=gene-LPH41_RS08970;Name=LPH41_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08970;old_locus_tag=LPH41_08970 NZ_CP087680.1 GeneMarkS-2+ CDS 2119782 2120024 . + 0 ID=cds-WP_152536573.1;Parent=gene-LPH41_RS08970;Dbxref=Genbank:WP_152536573.1;Name=WP_152536573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS08970;product=hypothetical protein;protein_id=WP_152536573.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2120021 2120269 . + . ID=gene-LPH41_RS08975;Name=LPH41_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08975;old_locus_tag=LPH41_08975 NZ_CP087680.1 Protein Homology CDS 2120021 2120269 . + 0 ID=cds-WP_114867176.1;Parent=gene-LPH41_RS08975;Dbxref=Genbank:WP_114867176.1;Name=WP_114867176.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: protein motif:HMM:NF013827.2;locus_tag=LPH41_RS08975;product=rhomboid family intramembrane serine protease;protein_id=WP_114867176.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2120284 2120409 . + . ID=gene-LPH41_RS12040;Name=LPH41_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12040 NZ_CP087680.1 GeneMarkS-2+ CDS 2120284 2120409 . + 0 ID=cds-WP_267903158.1;Parent=gene-LPH41_RS12040;Dbxref=Genbank:WP_267903158.1;Name=WP_267903158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12040;product=hypothetical protein;protein_id=WP_267903158.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2120592 2121902 . + . ID=gene-LPH41_RS08980;Name=LPH41_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08980;old_locus_tag=LPH41_08980 NZ_CP087680.1 Protein Homology CDS 2120592 2121902 . + 0 ID=cds-WP_038270375.1;Parent=gene-LPH41_RS08980;Dbxref=Genbank:WP_038270375.1;Name=WP_038270375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013696.2;locus_tag=LPH41_RS08980;product=M20 family metallopeptidase;protein_id=WP_038270375.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2122072 2122362 . + . ID=gene-LPH41_RS08985;Name=LPH41_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08985;old_locus_tag=LPH41_08985 NZ_CP087680.1 Protein Homology CDS 2122072 2122362 . + 0 ID=cds-WP_051482251.1;Parent=gene-LPH41_RS08985;Dbxref=Genbank:WP_051482251.1;Name=WP_051482251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023857.2;locus_tag=LPH41_RS08985;product=BrnA antitoxin family protein;protein_id=WP_051482251.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2122436 2122819 . + . ID=gene-LPH41_RS08990;Name=LPH41_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08990;old_locus_tag=LPH41_08990 NZ_CP087680.1 Protein Homology CDS 2122436 2122819 . + 0 ID=cds-WP_038270376.1;Parent=gene-LPH41_RS08990;Dbxref=Genbank:WP_038270376.1;Name=WP_038270376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852211.1;locus_tag=LPH41_RS08990;product=hypothetical protein;protein_id=WP_038270376.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2123607 2124806 . + . ID=gene-LPH41_RS08995;Name=LPH41_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS08995;old_locus_tag=LPH41_08995 NZ_CP087680.1 Protein Homology CDS 2123607 2124806 . + 0 ID=cds-WP_230428234.1;Parent=gene-LPH41_RS08995;Dbxref=Genbank:WP_230428234.1;Name=WP_230428234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607328.1;locus_tag=LPH41_RS08995;product=alpha/beta hydrolase;protein_id=WP_230428234.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2124875 2125156 . - . ID=gene-LPH41_RS09000;Name=LPH41_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09000;old_locus_tag=LPH41_09000 NZ_CP087680.1 Protein Homology CDS 2124875 2125156 . - 0 ID=cds-WP_038270378.1;Parent=gene-LPH41_RS09000;Dbxref=Genbank:WP_038270378.1;Name=WP_038270378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164775.1;locus_tag=LPH41_RS09000;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038270378.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2125208 2125414 . + . ID=gene-LPH41_RS09005;Name=LPH41_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09005;old_locus_tag=LPH41_09005 NZ_CP087680.1 GeneMarkS-2+ CDS 2125208 2125414 . + 0 ID=cds-WP_160165120.1;Parent=gene-LPH41_RS09005;Dbxref=Genbank:WP_160165120.1;Name=WP_160165120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09005;product=hypothetical protein;protein_id=WP_160165120.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2126096 2126347 . - . ID=gene-LPH41_RS09010;Name=LPH41_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09010;old_locus_tag=LPH41_09010 NZ_CP087680.1 GeneMarkS-2+ CDS 2126096 2126347 . - 0 ID=cds-WP_160165121.1;Parent=gene-LPH41_RS09010;Dbxref=Genbank:WP_160165121.1;Name=WP_160165121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09010;product=hypothetical protein;protein_id=WP_160165121.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2126541 2126924 . + . ID=gene-LPH41_RS09015;Name=LPH41_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09015;old_locus_tag=LPH41_09015 NZ_CP087680.1 GeneMarkS-2+ CDS 2126541 2126924 . + 0 ID=cds-WP_051482252.1;Parent=gene-LPH41_RS09015;Dbxref=Genbank:WP_051482252.1;Name=WP_051482252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09015;product=hypothetical protein;protein_id=WP_051482252.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2128319 2128495 . - . ID=gene-LPH41_RS09020;Name=LPH41_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09020;old_locus_tag=LPH41_09020 NZ_CP087680.1 GeneMarkS-2+ CDS 2128319 2128495 . - 0 ID=cds-WP_160165122.1;Parent=gene-LPH41_RS09020;Dbxref=Genbank:WP_160165122.1;Name=WP_160165122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09020;product=hypothetical protein;protein_id=WP_160165122.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2128631 2129050 . - . ID=gene-LPH41_RS09025;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=LPH41_RS09025;old_locus_tag=LPH41_09025 NZ_CP087680.1 Protein Homology CDS 2128631 2129050 . - 0 ID=cds-WP_038270455.1;Parent=gene-LPH41_RS09025;Dbxref=Genbank:WP_038270455.1;Name=WP_038270455.1;gbkey=CDS;gene=rnfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088821.1;locus_tag=LPH41_RS09025;product=Rnf electron transport complex subunit RnfB;protein_id=WP_038270455.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2130097 2130351 . + . ID=gene-LPH41_RS09030;Name=LPH41_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09030;old_locus_tag=LPH41_09030 NZ_CP087680.1 GeneMarkS-2+ CDS 2130097 2130351 . + 0 ID=cds-WP_152536574.1;Parent=gene-LPH41_RS09030;Dbxref=Genbank:WP_152536574.1;Name=WP_152536574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09030;product=hypothetical protein;protein_id=WP_152536574.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2130420 2132501 . - . ID=gene-LPH41_RS09035;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LPH41_RS09035;old_locus_tag=LPH41_09035 NZ_CP087680.1 Protein Homology CDS 2130420 2132501 . - 0 ID=cds-WP_038270456.1;Parent=gene-LPH41_RS09035;Dbxref=Genbank:WP_038270456.1;Name=WP_038270456.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304414.1;locus_tag=LPH41_RS09035;product=methionine--tRNA ligase;protein_id=WP_038270456.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2132670 2135786 . - . ID=gene-LPH41_RS09040;Name=LPH41_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09040;old_locus_tag=LPH41_09040 NZ_CP087680.1 Protein Homology CDS 2132670 2135786 . - 0 ID=cds-WP_038270380.1;Parent=gene-LPH41_RS09040;Dbxref=Genbank:WP_038270380.1;Name=WP_038270380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852285.1;locus_tag=LPH41_RS09040;product=TonB-dependent receptor;protein_id=WP_038270380.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2136861 2137682 . - . ID=gene-LPH41_RS09045;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LPH41_RS09045;old_locus_tag=LPH41_09045 NZ_CP087680.1 Protein Homology CDS 2136861 2137682 . - 0 ID=cds-WP_038270382.1;Parent=gene-LPH41_RS09045;Dbxref=Genbank:WP_038270382.1;Name=WP_038270382.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088794.1;locus_tag=LPH41_RS09045;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_038270382.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2137764 2139494 . + . ID=gene-LPH41_RS09050;Name=LPH41_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09050;old_locus_tag=LPH41_09050 NZ_CP087680.1 Protein Homology CDS 2137764 2139494 . + 0 ID=cds-WP_038270383.1;Parent=gene-LPH41_RS09050;Dbxref=Genbank:WP_038270383.1;Name=WP_038270383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083552.1;locus_tag=LPH41_RS09050;product=penicillin-binding protein activator;protein_id=WP_038270383.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2139498 2139863 . + . ID=gene-LPH41_RS09055;Name=LPH41_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09055;old_locus_tag=LPH41_09055 NZ_CP087680.1 Protein Homology CDS 2139498 2139863 . + 0 ID=cds-WP_038270384.1;Parent=gene-LPH41_RS09055;Dbxref=Genbank:WP_038270384.1;Name=WP_038270384.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893080.1;locus_tag=LPH41_RS09055;product=YraN family protein;protein_id=WP_038270384.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2140259 2141278 . + . ID=gene-LPH41_RS09060;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LPH41_RS09060;old_locus_tag=LPH41_09060 NZ_CP087680.1 Protein Homology CDS 2140259 2141278 . + 0 ID=cds-WP_038270385.1;Parent=gene-LPH41_RS09060;Dbxref=Genbank:WP_038270385.1;Name=WP_038270385.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098172.1;locus_tag=LPH41_RS09060;product=ribosome small subunit-dependent GTPase A;protein_id=WP_038270385.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2142086 2142508 . - . ID=gene-LPH41_RS09065;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=LPH41_RS09065;old_locus_tag=LPH41_09065 NZ_CP087680.1 Protein Homology CDS 2142086 2142508 . - 0 ID=cds-WP_038270457.1;Parent=gene-LPH41_RS09065;Dbxref=Genbank:WP_038270457.1;Name=WP_038270457.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;gene=azu;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237306.1;locus_tag=LPH41_RS09065;product=azurin;protein_id=WP_038270457.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2143838 2144560 . + . ID=gene-LPH41_RS09070;Name=LPH41_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09070;old_locus_tag=LPH41_09070 NZ_CP087680.1 Protein Homology CDS 2143838 2144560 . + 0 ID=cds-WP_038270387.1;Parent=gene-LPH41_RS09070;Dbxref=Genbank:WP_038270387.1;Name=WP_038270387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088782.1;locus_tag=LPH41_RS09070;product=glutamine amidotransferase;protein_id=WP_038270387.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2144809 2145681 . + . ID=gene-LPH41_RS09075;Name=LPH41_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09075;old_locus_tag=LPH41_09075 NZ_CP087680.1 Protein Homology CDS 2144809 2145681 . + 0 ID=cds-WP_038270388.1;Parent=gene-LPH41_RS09075;Dbxref=Genbank:WP_038270388.1;Name=WP_038270388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088776.1;locus_tag=LPH41_RS09075;product=BPSS1780 family membrane protein;protein_id=WP_038270388.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2145745 2146485 . - . ID=gene-LPH41_RS09080;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LPH41_RS09080;old_locus_tag=LPH41_09080 NZ_CP087680.1 Protein Homology CDS 2145745 2146485 . - 0 ID=cds-WP_038270389.1;Parent=gene-LPH41_RS09080;Dbxref=Genbank:WP_038270389.1;Name=WP_038270389.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893088.1;locus_tag=LPH41_RS09080;product=twin-arginine translocase subunit TatC;protein_id=WP_038270389.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2146482 2146904 . - . ID=gene-LPH41_RS09085;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LPH41_RS09085;old_locus_tag=LPH41_09085 NZ_CP087680.1 Protein Homology CDS 2146482 2146904 . - 0 ID=cds-WP_038270390.1;Parent=gene-LPH41_RS09085;Dbxref=Genbank:WP_038270390.1;Name=WP_038270390.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088772.1;locus_tag=LPH41_RS09085;product=Sec-independent protein translocase protein TatB;protein_id=WP_038270390.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2146922 2147137 . - . ID=gene-LPH41_RS09090;Name=LPH41_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09090;old_locus_tag=LPH41_09090 NZ_CP087680.1 Protein Homology CDS 2146922 2147137 . - 0 ID=cds-WP_038270391.1;Parent=gene-LPH41_RS09090;Dbxref=Genbank:WP_038270391.1;Name=WP_038270391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083544.1;locus_tag=LPH41_RS09090;product=Sec-independent protein translocase subunit TatA;protein_id=WP_038270391.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2147212 2148105 . - . ID=gene-LPH41_RS09095;Name=LPH41_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09095;old_locus_tag=LPH41_09095 NZ_CP087680.1 Protein Homology CDS 2147212 2148105 . - 0 ID=cds-WP_038270392.1;Parent=gene-LPH41_RS09095;Dbxref=Genbank:WP_038270392.1;Name=WP_038270392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852274.1;locus_tag=LPH41_RS09095;product=YSC84-related protein;protein_id=WP_038270392.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2148274 2149236 . + . ID=gene-LPH41_RS09100;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LPH41_RS09100;old_locus_tag=LPH41_09100 NZ_CP087680.1 Protein Homology CDS 2148274 2149236 . + 0 ID=cds-WP_038270393.1;Parent=gene-LPH41_RS09100;Dbxref=Genbank:WP_038270393.1;Name=WP_038270393.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852273.1;locus_tag=LPH41_RS09100;product=ferrochelatase;protein_id=WP_038270393.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2149567 2150328 . - . ID=gene-LPH41_RS09105;Name=LPH41_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09105;old_locus_tag=LPH41_09105 NZ_CP087680.1 Protein Homology CDS 2149567 2150328 . - 0 ID=cds-WP_038270394.1;Parent=gene-LPH41_RS09105;Dbxref=Genbank:WP_038270394.1;Name=WP_038270394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088764.1;locus_tag=LPH41_RS09105;product=SprT family zinc-dependent metalloprotease;protein_id=WP_038270394.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2150398 2151306 . - . ID=gene-LPH41_RS09110;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=LPH41_RS09110;old_locus_tag=LPH41_09110 NZ_CP087680.1 Protein Homology CDS 2150398 2151306 . - 0 ID=cds-WP_038270395.1;Parent=gene-LPH41_RS09110;Dbxref=Genbank:WP_038270395.1;Name=WP_038270395.1;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154674.1;locus_tag=LPH41_RS09110;product=recombination-associated protein RdgC;protein_id=WP_038270395.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2151345 2152208 . - . ID=gene-LPH41_RS09115;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LPH41_RS09115;old_locus_tag=LPH41_09115 NZ_CP087680.1 Protein Homology CDS 2151345 2152208 . - 0 ID=cds-WP_230428297.1;Parent=gene-LPH41_RS09115;Dbxref=Genbank:WP_230428297.1;Name=WP_230428297.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019397041.1;locus_tag=LPH41_RS09115;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_230428297.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2153795 2154313 . - . ID=gene-LPH41_RS09120;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=LPH41_RS09120;old_locus_tag=LPH41_09120 NZ_CP087680.1 Protein Homology CDS 2153795 2154313 . - 0 ID=cds-WP_038270397.1;Parent=gene-LPH41_RS09120;Dbxref=Genbank:WP_038270397.1;Name=WP_038270397.1;Ontology_term=GO:0019171;gbkey=CDS;gene=fabA;go_function=3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035827.1;locus_tag=LPH41_RS09120;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;protein_id=WP_038270397.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2155309 2157411 . - . ID=gene-LPH41_RS09125;Name=LPH41_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09125;old_locus_tag=LPH41_09125 NZ_CP087680.1 Protein Homology CDS 2155309 2157411 . - 0 ID=cds-WP_038270400.1;Parent=gene-LPH41_RS09125;Dbxref=Genbank:WP_038270400.1;Name=WP_038270400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083537.1;locus_tag=LPH41_RS09125;product=M13 family metallopeptidase;protein_id=WP_038270400.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2158307 2158969 . + . ID=gene-LPH41_RS09130;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LPH41_RS09130;old_locus_tag=LPH41_09130 NZ_CP087680.1 Protein Homology CDS 2158307 2158969 . + 0 ID=cds-WP_038270401.1;Parent=gene-LPH41_RS09130;Dbxref=Genbank:WP_038270401.1;Name=WP_038270401.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893106.1;locus_tag=LPH41_RS09130;product=dTMP kinase;protein_id=WP_038270401.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2159535 2160218 . - . ID=gene-LPH41_RS09135;Name=LPH41_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09135;old_locus_tag=LPH41_09135 NZ_CP087680.1 Protein Homology CDS 2159535 2160218 . - 0 ID=cds-WP_038270402.1;Parent=gene-LPH41_RS09135;Dbxref=Genbank:WP_038270402.1;Name=WP_038270402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852582.1;locus_tag=LPH41_RS09135;product=DUF3108 domain-containing protein;protein_id=WP_038270402.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2160222 2160965 . - . ID=gene-LPH41_RS09140;Name=LPH41_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09140;old_locus_tag=LPH41_09140 NZ_CP087680.1 Protein Homology CDS 2160222 2160965 . - 0 ID=cds-WP_230428296.1;Parent=gene-LPH41_RS09140;Dbxref=Genbank:WP_230428296.1;Name=WP_230428296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005412504.1;locus_tag=LPH41_RS09140;product=DUF3108 domain-containing protein;protein_id=WP_230428296.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2161141 2161809 . - . ID=gene-LPH41_RS09145;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LPH41_RS09145;old_locus_tag=LPH41_09145 NZ_CP087680.1 Protein Homology CDS 2161141 2161809 . - 0 ID=cds-WP_038270404.1;Parent=gene-LPH41_RS09145;Dbxref=Genbank:WP_038270404.1;Name=WP_038270404.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083533.1;locus_tag=LPH41_RS09145;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_038270404.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2161898 2162953 . - . ID=gene-LPH41_RS09150;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LPH41_RS09150;old_locus_tag=LPH41_09150 NZ_CP087680.1 Protein Homology CDS 2161898 2162953 . - 0 ID=cds-WP_038270405.1;Parent=gene-LPH41_RS09150;Dbxref=Genbank:WP_038270405.1;Name=WP_038270405.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098163.1;locus_tag=LPH41_RS09150;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_038270405.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2163068 2164168 . + . ID=gene-LPH41_RS09155;Name=LPH41_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09155;old_locus_tag=LPH41_09155 NZ_CP087680.1 Protein Homology CDS 2163068 2164168 . + 0 ID=cds-WP_162814105.1;Parent=gene-LPH41_RS09155;Dbxref=Genbank:WP_162814105.1;Name=WP_162814105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382704.1;locus_tag=LPH41_RS09155;product=DUF2066 domain-containing protein;protein_id=WP_162814105.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2164165 2165322 . + . ID=gene-LPH41_RS09160;Name=LPH41_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09160;old_locus_tag=LPH41_09160 NZ_CP087680.1 Protein Homology CDS 2164165 2165322 . + 0 ID=cds-WP_038270407.1;Parent=gene-LPH41_RS09160;Dbxref=Genbank:WP_038270407.1;Name=WP_038270407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851171.1;locus_tag=LPH41_RS09160;product=AI-2E family transporter;protein_id=WP_038270407.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2165319 2166101 . + . ID=gene-LPH41_RS09165;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LPH41_RS09165;old_locus_tag=LPH41_09165 NZ_CP087680.1 Protein Homology CDS 2165319 2166101 . + 0 ID=cds-WP_081755397.1;Parent=gene-LPH41_RS09165;Dbxref=Genbank:WP_081755397.1;Name=WP_081755397.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369247.1;locus_tag=LPH41_RS09165;product=DnaA regulatory inactivator Hda;protein_id=WP_081755397.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2166201 2166920 . - . ID=gene-LPH41_RS09170;Name=LPH41_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09170;old_locus_tag=LPH41_09170 NZ_CP087680.1 Protein Homology CDS 2166201 2166920 . - 0 ID=cds-WP_038270408.1;Parent=gene-LPH41_RS09170;Dbxref=Genbank:WP_038270408.1;Name=WP_038270408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369254.1;locus_tag=LPH41_RS09170;product=nucleotidyltransferase family protein;protein_id=WP_038270408.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2166917 2167936 . - . ID=gene-LPH41_RS09175;Name=LPH41_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09175;old_locus_tag=LPH41_09175 NZ_CP087680.1 Protein Homology CDS 2166917 2167936 . - 0 ID=cds-WP_171898092.1;Parent=gene-LPH41_RS09175;Dbxref=Genbank:WP_171898092.1;Name=WP_171898092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009591863.1;locus_tag=LPH41_RS09175;product=phosphotransferase;protein_id=WP_171898092.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2169828 2170157 . + . ID=gene-LPH41_RS09180;Name=LPH41_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09180;old_locus_tag=LPH41_09180 NZ_CP087680.1 Protein Homology CDS 2169828 2170157 . + 0 ID=cds-WP_038270411.1;Parent=gene-LPH41_RS09180;Dbxref=Genbank:WP_038270411.1;Name=WP_038270411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851167.1;locus_tag=LPH41_RS09180;product=helix-hairpin-helix domain-containing protein;protein_id=WP_038270411.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2171013 2172593 . - . ID=gene-LPH41_RS09185;Name=LPH41_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09185;old_locus_tag=LPH41_09185 NZ_CP087680.1 Protein Homology CDS 2171013 2172593 . - 0 ID=cds-WP_038270412.1;Parent=gene-LPH41_RS09185;Dbxref=Genbank:WP_038270412.1;Name=WP_038270412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019659424.1;locus_tag=LPH41_RS09185;product=sulfite reductase subunit alpha;protein_id=WP_038270412.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2172590 2173561 . - . ID=gene-LPH41_RS09190;Name=LPH41_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09190;old_locus_tag=LPH41_09190 NZ_CP087680.1 Protein Homology CDS 2172590 2173561 . - 0 ID=cds-WP_038270413.1;Parent=gene-LPH41_RS09190;Dbxref=Genbank:WP_038270413.1;Name=WP_038270413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851166.1;locus_tag=LPH41_RS09190;product=FAD:protein FMN transferase;protein_id=WP_038270413.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2173627 2174430 . - . ID=gene-LPH41_RS09195;Name=LPH41_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09195;old_locus_tag=LPH41_09195 NZ_CP087680.1 Protein Homology CDS 2173627 2174430 . - 0 ID=cds-WP_038270414.1;Parent=gene-LPH41_RS09195;Dbxref=Genbank:WP_038270414.1;Name=WP_038270414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237449.1;locus_tag=LPH41_RS09195;product=DUF4198 domain-containing protein;protein_id=WP_038270414.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2174465 2174977 . - . ID=gene-LPH41_RS09200;Name=LPH41_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09200;old_locus_tag=LPH41_09200 NZ_CP087680.1 Protein Homology CDS 2174465 2174977 . - 0 ID=cds-WP_038270415.1;Parent=gene-LPH41_RS09200;Dbxref=Genbank:WP_038270415.1;Name=WP_038270415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450672.1;locus_tag=LPH41_RS09200;product=DUF2271 domain-containing protein;protein_id=WP_038270415.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2174997 2175647 . - . ID=gene-LPH41_RS09205;Name=LPH41_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09205;old_locus_tag=LPH41_09205 NZ_CP087680.1 Protein Homology CDS 2174997 2175647 . - 0 ID=cds-WP_038270416.1;Parent=gene-LPH41_RS09205;Dbxref=Genbank:WP_038270416.1;Name=WP_038270416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487779.1;locus_tag=LPH41_RS09205;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_038270416.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2175656 2176348 . - . ID=gene-LPH41_RS09210;Name=LPH41_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09210;old_locus_tag=LPH41_09210 NZ_CP087680.1 Protein Homology CDS 2175656 2176348 . - 0 ID=cds-WP_038270417.1;Parent=gene-LPH41_RS09210;Dbxref=Genbank:WP_038270417.1;Name=WP_038270417.1;Ontology_term=GO:0005506,GO:0016706,GO:0031418;gbkey=CDS;go_function=iron ion binding|0005506||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA,L-ascorbic acid binding|0031418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088698.1;locus_tag=LPH41_RS09210;product=Fe2+-dependent dioxygenase;protein_id=WP_038270417.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2176392 2178671 . - . ID=gene-LPH41_RS09215;Name=LPH41_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09215;old_locus_tag=LPH41_09215 NZ_CP087680.1 Protein Homology CDS 2176392 2178671 . - 0 ID=cds-WP_038270418.1;Parent=gene-LPH41_RS09215;Dbxref=Genbank:WP_038270418.1;Name=WP_038270418.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088697.1;locus_tag=LPH41_RS09215;product=catecholate siderophore receptor Fiu;protein_id=WP_038270418.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2179081 2179473 . + . ID=gene-LPH41_RS09220;Name=LPH41_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09220;old_locus_tag=LPH41_09220 NZ_CP087680.1 Protein Homology CDS 2179081 2179473 . + 0 ID=cds-WP_038270419.1;Parent=gene-LPH41_RS09220;Dbxref=Genbank:WP_038270419.1;Name=WP_038270419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088696.1;locus_tag=LPH41_RS09220;product=DUF4398 domain-containing protein;protein_id=WP_038270419.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2179476 2180372 . + . ID=gene-LPH41_RS09225;Name=LPH41_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09225;old_locus_tag=LPH41_09225 NZ_CP087680.1 Protein Homology CDS 2179476 2180372 . + 0 ID=cds-WP_038270460.1;Parent=gene-LPH41_RS09225;Dbxref=Genbank:WP_038270460.1;Name=WP_038270460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161845.1;locus_tag=LPH41_RS09225;product=membrane protein;protein_id=WP_038270460.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2180701 2180919 . + . ID=gene-LPH41_RS09230;Name=LPH41_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09230;old_locus_tag=LPH41_09230 NZ_CP087680.1 Protein Homology CDS 2180701 2180919 . + 0 ID=cds-WP_038270420.1;Parent=gene-LPH41_RS09230;Dbxref=Genbank:WP_038270420.1;Name=WP_038270420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237985.1;locus_tag=LPH41_RS09230;product=YdcH family protein;protein_id=WP_038270420.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2181065 2182435 . + . ID=gene-LPH41_RS09235;Name=LPH41_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09235;old_locus_tag=LPH41_09235 NZ_CP087680.1 Protein Homology CDS 2181065 2182435 . + 0 ID=cds-WP_038270421.1;Parent=gene-LPH41_RS09235;Dbxref=Genbank:WP_038270421.1;Name=WP_038270421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157251.1;locus_tag=LPH41_RS09235;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_038270421.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2182703 2184085 . + . ID=gene-LPH41_RS09240;Name=LPH41_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09240;old_locus_tag=LPH41_09240 NZ_CP087680.1 Protein Homology CDS 2182703 2184085 . + 0 ID=cds-WP_038270422.1;Parent=gene-LPH41_RS09240;Dbxref=Genbank:WP_038270422.1;Name=WP_038270422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088692.1;locus_tag=LPH41_RS09240;product=FkbM family methyltransferase;protein_id=WP_038270422.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2184089 2186632 . + . ID=gene-LPH41_RS09245;Name=LPH41_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09245;old_locus_tag=LPH41_09245 NZ_CP087680.1 Protein Homology CDS 2184089 2186632 . + 0 ID=cds-WP_038270423.1;Parent=gene-LPH41_RS09245;Dbxref=Genbank:WP_038270423.1;Name=WP_038270423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852783.1;locus_tag=LPH41_RS09245;product=glycosyltransferase family 1 protein;protein_id=WP_038270423.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2186724 2187764 . + . ID=gene-LPH41_RS09250;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LPH41_RS09250;old_locus_tag=LPH41_09250 NZ_CP087680.1 Protein Homology CDS 2186724 2187764 . + 0 ID=cds-WP_038270424.1;Parent=gene-LPH41_RS09250;Dbxref=Genbank:WP_038270424.1;Name=WP_038270424.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852782.1;locus_tag=LPH41_RS09250;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_038270424.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2187764 2188678 . + . ID=gene-LPH41_RS09255;Name=LPH41_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09255;old_locus_tag=LPH41_09255 NZ_CP087680.1 Protein Homology CDS 2187764 2188678 . + 0 ID=cds-WP_038270425.1;Parent=gene-LPH41_RS09255;Dbxref=Genbank:WP_038270425.1;Name=WP_038270425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035851.1;locus_tag=LPH41_RS09255;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_038270425.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2188865 2189809 . + . ID=gene-LPH41_RS09260;Name=LPH41_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09260;old_locus_tag=LPH41_09260 NZ_CP087680.1 Protein Homology CDS 2188865 2189809 . + 0 ID=cds-WP_038270426.1;Parent=gene-LPH41_RS09260;Dbxref=Genbank:WP_038270426.1;Name=WP_038270426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088689.1;locus_tag=LPH41_RS09260;product=SDR family oxidoreductase;protein_id=WP_038270426.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2189812 2190765 . + . ID=gene-LPH41_RS09265;Name=LPH41_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09265;old_locus_tag=LPH41_09265 NZ_CP087680.1 Protein Homology CDS 2189812 2190765 . + 0 ID=cds-WP_038270427.1;Parent=gene-LPH41_RS09265;Dbxref=Genbank:WP_038270427.1;Name=WP_038270427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083510.1;locus_tag=LPH41_RS09265;product=glycosyltransferase;protein_id=WP_038270427.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2190749 2191156 . + . ID=gene-LPH41_RS09270;Name=LPH41_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09270;old_locus_tag=LPH41_09270 NZ_CP087680.1 Protein Homology CDS 2190749 2191156 . + 0 ID=cds-WP_038270428.1;Parent=gene-LPH41_RS09270;Dbxref=Genbank:WP_038270428.1;Name=WP_038270428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088687.1;locus_tag=LPH41_RS09270;product=GtrA family protein;protein_id=WP_038270428.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2191153 2191752 . + . ID=gene-LPH41_RS09275;Name=LPH41_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09275;old_locus_tag=LPH41_09275 NZ_CP087680.1 Protein Homology CDS 2191153 2191752 . + 0 ID=cds-WP_038270429.1;Parent=gene-LPH41_RS09275;Dbxref=Genbank:WP_038270429.1;Name=WP_038270429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852776.1;locus_tag=LPH41_RS09275;product=hypothetical protein;protein_id=WP_038270429.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2191775 2193814 . + . ID=gene-LPH41_RS09280;Name=LPH41_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09280;old_locus_tag=LPH41_09280 NZ_CP087680.1 Protein Homology CDS 2191775 2193814 . + 0 ID=cds-WP_038270430.1;Parent=gene-LPH41_RS09280;Dbxref=Genbank:WP_038270430.1;Name=WP_038270430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083509.1;locus_tag=LPH41_RS09280;product=hypothetical protein;protein_id=WP_038270430.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2195005 2196645 . - . ID=gene-LPH41_RS09285;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LPH41_RS09285;old_locus_tag=LPH41_09285 NZ_CP087680.1 Protein Homology CDS 2195005 2196645 . - 0 ID=cds-WP_038270431.1;Parent=gene-LPH41_RS09285;Dbxref=Genbank:WP_038270431.1;Name=WP_038270431.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1;locus_tag=LPH41_RS09285;product=chaperonin GroEL;protein_id=WP_038270431.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2196756 2197043 . - . ID=gene-LPH41_RS09290;Name=LPH41_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09290;old_locus_tag=LPH41_09290 NZ_CP087680.1 Protein Homology CDS 2196756 2197043 . - 0 ID=cds-WP_038270432.1;Parent=gene-LPH41_RS09290;Dbxref=Genbank:WP_038270432.1;Name=WP_038270432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303525.1;locus_tag=LPH41_RS09290;product=co-chaperone GroES;protein_id=WP_038270432.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2197635 2197973 . + . ID=gene-LPH41_RS09295;Name=LPH41_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09295;old_locus_tag=LPH41_09295 NZ_CP087680.1 Protein Homology CDS 2197635 2197973 . + 0 ID=cds-WP_038270433.1;Parent=gene-LPH41_RS09295;Dbxref=Genbank:WP_038270433.1;Name=WP_038270433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893143.1;locus_tag=LPH41_RS09295;product=divalent-cation tolerance protein CutA;protein_id=WP_038270433.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2198012 2200264 . + . ID=gene-LPH41_RS09300;Name=LPH41_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09300;old_locus_tag=LPH41_09300 NZ_CP087680.1 Protein Homology CDS 2198012 2200264 . + 0 ID=cds-WP_267903179.1;Parent=gene-LPH41_RS09300;Dbxref=Genbank:WP_267903179.1;Name=WP_267903179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411230.1;locus_tag=LPH41_RS09300;product=protein-disulfide reductase DsbD;protein_id=WP_267903179.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2200414 2200860 . + . ID=gene-LPH41_RS09305;Name=LPH41_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09305;old_locus_tag=LPH41_09305 NZ_CP087680.1 GeneMarkS-2+ CDS 2200414 2200860 . + 0 ID=cds-WP_152536576.1;Parent=gene-LPH41_RS09305;Dbxref=Genbank:WP_152536576.1;Name=WP_152536576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09305;product=hypothetical protein;protein_id=WP_152536576.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2201238 2201408 . + . ID=gene-LPH41_RS09310;Name=LPH41_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09310;old_locus_tag=LPH41_09310 NZ_CP087680.1 GeneMarkS-2+ CDS 2201238 2201408 . + 0 ID=cds-WP_160165123.1;Parent=gene-LPH41_RS09310;Dbxref=Genbank:WP_160165123.1;Name=WP_160165123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09310;product=hypothetical protein;protein_id=WP_160165123.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2202637 2202825 . + . ID=gene-LPH41_RS09315;Name=LPH41_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09315;old_locus_tag=LPH41_09315 NZ_CP087680.1 GeneMarkS-2+ CDS 2202637 2202825 . + 0 ID=cds-WP_114867174.1;Parent=gene-LPH41_RS09315;Dbxref=Genbank:WP_114867174.1;Name=WP_114867174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09315;product=hypothetical protein;protein_id=WP_114867174.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2203188 2203997 . - . ID=gene-LPH41_RS09320;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LPH41_RS09320;old_locus_tag=LPH41_09320 NZ_CP087680.1 Protein Homology CDS 2203188 2203997 . - 0 ID=cds-WP_038270437.1;Parent=gene-LPH41_RS09320;Dbxref=Genbank:WP_038270437.1;Name=WP_038270437.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853073.1;locus_tag=LPH41_RS09320;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_038270437.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2206120 2206971 . + . ID=gene-LPH41_RS09325;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LPH41_RS09325;old_locus_tag=LPH41_09325 NZ_CP087680.1 Protein Homology CDS 2206120 2206971 . + 0 ID=cds-WP_038270438.1;Parent=gene-LPH41_RS09325;Dbxref=Genbank:WP_038270438.1;Name=WP_038270438.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340310.1;locus_tag=LPH41_RS09325;product=shikimate dehydrogenase;protein_id=WP_038270438.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2208006 2208164 . + . ID=gene-LPH41_RS09330;Name=LPH41_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09330;old_locus_tag=LPH41_09330 NZ_CP087680.1 GeneMarkS-2+ CDS 2208006 2208164 . + 0 ID=cds-WP_160165125.1;Parent=gene-LPH41_RS09330;Dbxref=Genbank:WP_160165125.1;Name=WP_160165125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09330;product=hypothetical protein;protein_id=WP_160165125.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2208499 2208918 . + . ID=gene-LPH41_RS09335;Name=LPH41_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09335;old_locus_tag=LPH41_09335 NZ_CP087680.1 GeneMarkS-2+ CDS 2208499 2208918 . + 0 ID=cds-WP_038270439.1;Parent=gene-LPH41_RS09335;Dbxref=Genbank:WP_038270439.1;Name=WP_038270439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09335;product=hypothetical protein;protein_id=WP_038270439.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2208915 2209040 . + . ID=gene-LPH41_RS12045;Name=LPH41_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12045 NZ_CP087680.1 GeneMarkS-2+ CDS 2208915 2209040 . + 0 ID=cds-WP_267903157.1;Parent=gene-LPH41_RS12045;Dbxref=Genbank:WP_267903157.1;Name=WP_267903157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12045;product=hypothetical protein;protein_id=WP_267903157.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2209380 2210342 . - . ID=gene-LPH41_RS09340;Name=LPH41_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09340;old_locus_tag=LPH41_09340 NZ_CP087680.1 Protein Homology CDS 2209380 2210342 . - 0 ID=cds-WP_051482254.1;Parent=gene-LPH41_RS09340;Dbxref=Genbank:WP_051482254.1;Name=WP_051482254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LPH41_RS09340;product=acyltransferase;protein_id=WP_051482254.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2210520 2210607 . - . ID=gene-LPH41_RS09345;Name=LPH41_RS09345;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS09345;old_locus_tag=LPH41_09345 NZ_CP087680.1 tRNAscan-SE tRNA 2210520 2210607 . - . ID=rna-LPH41_RS09345;Parent=gene-LPH41_RS09345;anticodon=(pos:complement(2210571..2210573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS09345;product=tRNA-Ser NZ_CP087680.1 tRNAscan-SE exon 2210520 2210607 . - . ID=exon-LPH41_RS09345-1;Parent=rna-LPH41_RS09345;anticodon=(pos:complement(2210571..2210573));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS09345;product=tRNA-Ser NZ_CP087680.1 RefSeq gene 2211323 2212027 . - . ID=gene-LPH41_RS09350;Name=LPH41_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09350;old_locus_tag=LPH41_09350 NZ_CP087680.1 Protein Homology CDS 2211323 2212027 . - 0 ID=cds-WP_051482255.1;Parent=gene-LPH41_RS09350;Dbxref=Genbank:WP_051482255.1;Name=WP_051482255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343964.1;locus_tag=LPH41_RS09350;product=CoA pyrophosphatase;protein_id=WP_051482255.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2212278 2212976 . - . ID=gene-LPH41_RS09355;Name=LPH41_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09355;old_locus_tag=LPH41_09355 NZ_CP087680.1 Protein Homology CDS 2212278 2212976 . - 0 ID=cds-WP_038270440.1;Parent=gene-LPH41_RS09355;Dbxref=Genbank:WP_038270440.1;Name=WP_038270440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804447.1;locus_tag=LPH41_RS09355;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_038270440.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2213388 2213594 . + . ID=gene-LPH41_RS09360;Name=LPH41_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09360;old_locus_tag=LPH41_09360 NZ_CP087680.1 GeneMarkS-2+ CDS 2213388 2213594 . + 0 ID=cds-WP_160165126.1;Parent=gene-LPH41_RS09360;Dbxref=Genbank:WP_160165126.1;Name=WP_160165126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09360;product=hypothetical protein;protein_id=WP_160165126.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2213788 2214159 . + . ID=gene-LPH41_RS09365;Name=LPH41_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09365;old_locus_tag=LPH41_09365 NZ_CP087680.1 Protein Homology CDS 2213788 2214159 . + 0 ID=cds-WP_038270441.1;Parent=gene-LPH41_RS09365;Dbxref=Genbank:WP_038270441.1;Name=WP_038270441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185886.1;locus_tag=LPH41_RS09365;product=hypothetical protein;protein_id=WP_038270441.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2214159 2214842 . + . ID=gene-LPH41_RS09370;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LPH41_RS09370;old_locus_tag=LPH41_09370 NZ_CP087680.1 Protein Homology CDS 2214159 2214842 . + 0 ID=cds-WP_114867173.1;Parent=gene-LPH41_RS09370;Dbxref=Genbank:WP_114867173.1;Name=WP_114867173.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851466.1;locus_tag=LPH41_RS09370;product=endonuclease III;protein_id=WP_114867173.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2215393 2215569 . + . ID=gene-LPH41_RS09375;Name=LPH41_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09375;old_locus_tag=LPH41_09375 NZ_CP087680.1 GeneMarkS-2+ CDS 2215393 2215569 . + 0 ID=cds-WP_160165127.1;Parent=gene-LPH41_RS09375;Dbxref=Genbank:WP_160165127.1;Name=WP_160165127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09375;product=hypothetical protein;protein_id=WP_160165127.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2216104 2216265 . - . ID=gene-LPH41_RS09380;Name=LPH41_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09380;old_locus_tag=LPH41_09380 NZ_CP087680.1 GeneMarkS-2+ CDS 2216104 2216265 . - 0 ID=cds-WP_160165128.1;Parent=gene-LPH41_RS09380;Dbxref=Genbank:WP_160165128.1;Name=WP_160165128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09380;product=hypothetical protein;protein_id=WP_160165128.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2217043 2217705 . - . ID=gene-LPH41_RS09385;Name=LPH41_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09385;old_locus_tag=LPH41_09385 NZ_CP087680.1 Protein Homology CDS 2217043 2217705 . - 0 ID=cds-WP_038270444.1;Parent=gene-LPH41_RS09385;Dbxref=Genbank:WP_038270444.1;Name=WP_038270444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182637.1;locus_tag=LPH41_RS09385;product=rhomboid family intramembrane serine protease;protein_id=WP_038270444.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2218255 2218803 . + . ID=gene-LPH41_RS09390;Name=LPH41_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09390;old_locus_tag=LPH41_09390 NZ_CP087680.1 Protein Homology CDS 2218255 2218803 . + 0 ID=cds-WP_069636201.1;Parent=gene-LPH41_RS09390;Dbxref=Genbank:WP_069636201.1;Name=WP_069636201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024736.2;locus_tag=LPH41_RS09390;product=transposase;protein_id=WP_069636201.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2219175 2220416 . - . ID=gene-LPH41_RS09395;Name=LPH41_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09395;old_locus_tag=LPH41_09395 NZ_CP087680.1 Protein Homology CDS 2219175 2220416 . - 0 ID=cds-WP_230428295.1;Parent=gene-LPH41_RS09395;Dbxref=Genbank:WP_230428295.1;Name=WP_230428295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098144.1;locus_tag=LPH41_RS09395;product=DUF418 domain-containing protein;protein_id=WP_230428295.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2220506 2220985 . - . ID=gene-LPH41_RS09400;Name=LPH41_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09400;old_locus_tag=LPH41_09400 NZ_CP087680.1 Protein Homology CDS 2220506 2220985 . - 0 ID=cds-WP_038271526.1;Parent=gene-LPH41_RS09400;Dbxref=Genbank:WP_038271526.1;Name=WP_038271526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083483.1;locus_tag=LPH41_RS09400;product=peptidylprolyl isomerase;protein_id=WP_038271526.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2221101 2221640 . + . ID=gene-LPH41_RS09405;Name=LPH41_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09405;old_locus_tag=LPH41_09405 NZ_CP087680.1 Protein Homology CDS 2221101 2221640 . + 0 ID=cds-WP_171898056.1;Parent=gene-LPH41_RS09405;Dbxref=Genbank:WP_171898056.1;Name=WP_171898056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912976.1;locus_tag=LPH41_RS09405;product=C40 family peptidase;protein_id=WP_171898056.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2221841 2222542 . + . ID=gene-LPH41_RS09410;Name=LPH41_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09410;old_locus_tag=LPH41_09410 NZ_CP087680.1 Protein Homology CDS 2221841 2222542 . + 0 ID=cds-WP_081755453.1;Parent=gene-LPH41_RS09410;Dbxref=Genbank:WP_081755453.1;Name=WP_081755453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508276.1;locus_tag=LPH41_RS09410;product=C40 family peptidase;protein_id=WP_081755453.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2223012 2224325 . - . ID=gene-LPH41_RS09415;Name=LPH41_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09415;old_locus_tag=LPH41_09415 NZ_CP087680.1 Protein Homology CDS 2223012 2224325 . - 0 ID=cds-WP_038271525.1;Parent=gene-LPH41_RS09415;Dbxref=Genbank:WP_038271525.1;Name=WP_038271525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338012.1;locus_tag=LPH41_RS09415;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_038271525.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2224571 2225932 . + . ID=gene-LPH41_RS09420;Name=LPH41_RS09420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS09420;old_locus_tag=LPH41_09420;pseudo=true NZ_CP087680.1 Protein Homology CDS 2224571 2225932 . + 0 ID=cds-LPH41_RS09420;Parent=gene-LPH41_RS09420;Note=frameshifted;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088661.1;locus_tag=LPH41_RS09420;product=alkaline phosphatase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2226332 2227639 . + . ID=gene-LPH41_RS09425;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LPH41_RS09425;old_locus_tag=LPH41_09425 NZ_CP087680.1 Protein Homology CDS 2226332 2227639 . + 0 ID=cds-WP_038271545.1;Parent=gene-LPH41_RS09425;Dbxref=Genbank:WP_038271545.1;Name=WP_038271545.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851476.1;locus_tag=LPH41_RS09425;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_038271545.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2227671 2227937 . + . ID=gene-LPH41_RS09430;Name=LPH41_RS09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09430;old_locus_tag=LPH41_09430 NZ_CP087680.1 Protein Homology CDS 2227671 2227937 . + 0 ID=cds-WP_038271524.1;Parent=gene-LPH41_RS09430;Dbxref=Genbank:WP_038271524.1;Name=WP_038271524.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088658.1;locus_tag=LPH41_RS09430;product=exodeoxyribonuclease VII small subunit;protein_id=WP_038271524.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2227934 2228809 . + . ID=gene-LPH41_RS09435;Name=LPH41_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09435;old_locus_tag=LPH41_09435 NZ_CP087680.1 Protein Homology CDS 2227934 2228809 . + 0 ID=cds-WP_038271523.1;Parent=gene-LPH41_RS09435;Dbxref=Genbank:WP_038271523.1;Name=WP_038271523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174296.1;locus_tag=LPH41_RS09435;product=polyprenyl synthetase family protein;protein_id=WP_038271523.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2228985 2229299 . + . ID=gene-LPH41_RS09440;Name=LPH41_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09440;old_locus_tag=LPH41_09440 NZ_CP087680.1 GeneMarkS-2+ CDS 2228985 2229299 . + 0 ID=cds-WP_160165191.1;Parent=gene-LPH41_RS09440;Dbxref=Genbank:WP_160165191.1;Name=WP_160165191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09440;product=hypothetical protein;protein_id=WP_160165191.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2229250 2229804 . + . ID=gene-LPH41_RS09445;Name=LPH41_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09445;old_locus_tag=LPH41_09445 NZ_CP087680.1 Protein Homology CDS 2229250 2229804 . + 0 ID=cds-WP_038271521.1;Parent=gene-LPH41_RS09445;Dbxref=Genbank:WP_038271521.1;Name=WP_038271521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098139.1;locus_tag=LPH41_RS09445;product=hypothetical protein;protein_id=WP_038271521.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2230058 2230495 . + . ID=gene-LPH41_RS09450;Name=LPH41_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09450;old_locus_tag=LPH41_09450 NZ_CP087680.1 Protein Homology CDS 2230058 2230495 . + 0 ID=cds-WP_038271543.1;Parent=gene-LPH41_RS09450;Dbxref=Genbank:WP_038271543.1;Name=WP_038271543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088654.1;locus_tag=LPH41_RS09450;product=hypothetical protein;protein_id=WP_038271543.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2230488 2230826 . + . ID=gene-LPH41_RS09455;Name=LPH41_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09455;old_locus_tag=LPH41_09455 NZ_CP087680.1 GeneMarkS-2+ CDS 2230488 2230826 . + 0 ID=cds-WP_152536630.1;Parent=gene-LPH41_RS09455;Dbxref=Genbank:WP_152536630.1;Name=WP_152536630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09455;product=hypothetical protein;protein_id=WP_152536630.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2230975 2231541 . + . ID=gene-LPH41_RS09460;Name=LPH41_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09460;old_locus_tag=LPH41_09460 NZ_CP087680.1 Protein Homology CDS 2230975 2231541 . + 0 ID=cds-WP_038271519.1;Parent=gene-LPH41_RS09460;Dbxref=Genbank:WP_038271519.1;Name=WP_038271519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088656.1;locus_tag=LPH41_RS09460;product=hypothetical protein;protein_id=WP_038271519.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2231740 2232240 . + . ID=gene-LPH41_RS09465;Name=LPH41_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09465;old_locus_tag=LPH41_09465 NZ_CP087680.1 Protein Homology CDS 2231740 2232240 . + 0 ID=cds-WP_230428232.1;Parent=gene-LPH41_RS09465;Dbxref=Genbank:WP_230428232.1;Name=WP_230428232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893188.1;locus_tag=LPH41_RS09465;product=hypothetical protein;protein_id=WP_230428232.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2232233 2232523 . + . ID=gene-LPH41_RS09470;Name=LPH41_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09470;old_locus_tag=LPH41_09470 NZ_CP087680.1 GeneMarkS-2+ CDS 2232233 2232523 . + 0 ID=cds-WP_038271516.1;Parent=gene-LPH41_RS09470;Dbxref=Genbank:WP_038271516.1;Name=WP_038271516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09470;product=hypothetical protein;protein_id=WP_038271516.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2232751 2233281 . + . ID=gene-LPH41_RS09475;Name=LPH41_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09475;old_locus_tag=LPH41_09475 NZ_CP087680.1 Protein Homology CDS 2232751 2233281 . + 0 ID=cds-WP_201745726.1;Parent=gene-LPH41_RS09475;Dbxref=Genbank:WP_201745726.1;Name=WP_201745726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382698.1;locus_tag=LPH41_RS09475;product=hypothetical protein;protein_id=WP_201745726.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2233438 2233851 . + . ID=gene-LPH41_RS09480;Name=LPH41_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09480;old_locus_tag=LPH41_09480 NZ_CP087680.1 Protein Homology CDS 2233438 2233851 . + 0 ID=cds-WP_230428231.1;Parent=gene-LPH41_RS09480;Dbxref=Genbank:WP_230428231.1;Name=WP_230428231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098140.1;locus_tag=LPH41_RS09480;product=hypothetical protein;protein_id=WP_230428231.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2233851 2234054 . + . ID=gene-LPH41_RS09485;Name=LPH41_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09485;old_locus_tag=LPH41_09485 NZ_CP087680.1 GeneMarkS-2+ CDS 2233851 2234054 . + 0 ID=cds-WP_081755452.1;Parent=gene-LPH41_RS09485;Dbxref=Genbank:WP_081755452.1;Name=WP_081755452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09485;product=hypothetical protein;protein_id=WP_081755452.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2234388 2236976 . + . ID=gene-LPH41_RS09490;Name=LPH41_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09490;old_locus_tag=LPH41_09490 NZ_CP087680.1 Protein Homology CDS 2234388 2236976 . + 0 ID=cds-WP_230439280.1;Parent=gene-LPH41_RS09490;Dbxref=Genbank:WP_230439280.1;Name=WP_230439280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083476.1;locus_tag=LPH41_RS09490;product=calcium-binding protein;protein_id=WP_230439280.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2237105 2237377 . - . ID=gene-LPH41_RS09495;Name=LPH41_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09495;old_locus_tag=LPH41_09495 NZ_CP087680.1 Protein Homology CDS 2237105 2237377 . - 0 ID=cds-WP_230428294.1;Parent=gene-LPH41_RS09495;Dbxref=Genbank:WP_230428294.1;Name=WP_230428294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014667.2;locus_tag=LPH41_RS09495;product=SCO family protein;protein_id=WP_230428294.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2237552 2238478 . + . ID=gene-LPH41_RS09500;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LPH41_RS09500;old_locus_tag=LPH41_09500 NZ_CP087680.1 Protein Homology CDS 2237552 2238478 . + 0 ID=cds-WP_038271514.1;Parent=gene-LPH41_RS09500;Dbxref=Genbank:WP_038271514.1;Name=WP_038271514.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927455.1;locus_tag=LPH41_RS09500;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_038271514.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2238491 2239609 . + . ID=gene-LPH41_RS09505;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LPH41_RS09505;old_locus_tag=LPH41_09505 NZ_CP087680.1 Protein Homology CDS 2238491 2239609 . + 0 ID=cds-WP_038271513.1;Parent=gene-LPH41_RS09505;Dbxref=Genbank:WP_038271513.1;Name=WP_038271513.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851985.1;locus_tag=LPH41_RS09505;product=chorismate synthase;protein_id=WP_038271513.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2239602 2239901 . + . ID=gene-LPH41_RS09510;Name=LPH41_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09510;old_locus_tag=LPH41_09510 NZ_CP087680.1 GeneMarkS-2+ CDS 2239602 2239901 . + 0 ID=cds-WP_038271512.1;Parent=gene-LPH41_RS09510;Dbxref=Genbank:WP_038271512.1;Name=WP_038271512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09510;product=hypothetical protein;protein_id=WP_038271512.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2240269 2241303 . + . ID=gene-LPH41_RS09515;Name=LPH41_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09515;old_locus_tag=LPH41_09515 NZ_CP087680.1 Protein Homology CDS 2240269 2241303 . + 0 ID=cds-WP_038271511.1;Parent=gene-LPH41_RS09515;Dbxref=Genbank:WP_038271511.1;Name=WP_038271511.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851986.1;locus_tag=LPH41_RS09515;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_038271511.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2241461 2243233 . + . ID=gene-LPH41_RS09520;Name=LPH41_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09520;old_locus_tag=LPH41_09520 NZ_CP087680.1 Protein Homology CDS 2241461 2243233 . + 0 ID=cds-WP_038271510.1;Parent=gene-LPH41_RS09520;Dbxref=Genbank:WP_038271510.1;Name=WP_038271510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083830.1;locus_tag=LPH41_RS09520;product=FimV family protein;protein_id=WP_038271510.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2243278 2244048 . + . ID=gene-LPH41_RS09525;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LPH41_RS09525;old_locus_tag=LPH41_09525 NZ_CP087680.1 Protein Homology CDS 2243278 2244048 . + 0 ID=cds-WP_038271509.1;Parent=gene-LPH41_RS09525;Dbxref=Genbank:WP_038271509.1;Name=WP_038271509.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005417971.1;locus_tag=LPH41_RS09525;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_038271509.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2244045 2244707 . + . ID=gene-LPH41_RS09530;Name=LPH41_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09530;old_locus_tag=LPH41_09530 NZ_CP087680.1 Protein Homology CDS 2244045 2244707 . + 0 ID=cds-WP_038271508.1;Parent=gene-LPH41_RS09530;Dbxref=Genbank:WP_038271508.1;Name=WP_038271508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006381350.1;locus_tag=LPH41_RS09530;product=phosphoribosylanthranilate isomerase;protein_id=WP_038271508.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2244731 2244940 . - . ID=gene-LPH41_RS09535;Name=LPH41_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09535;old_locus_tag=LPH41_09535 NZ_CP087680.1 GeneMarkS-2+ CDS 2244731 2244940 . - 0 ID=cds-WP_038271507.1;Parent=gene-LPH41_RS09535;Dbxref=Genbank:WP_038271507.1;Name=WP_038271507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09535;product=hypothetical protein;protein_id=WP_038271507.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2245148 2246362 . + . ID=gene-LPH41_RS09540;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LPH41_RS09540;old_locus_tag=LPH41_09540 NZ_CP087680.1 Protein Homology CDS 2245148 2246362 . + 0 ID=cds-WP_038271531.1;Parent=gene-LPH41_RS09540;Dbxref=Genbank:WP_038271531.1;Name=WP_038271531.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893879.1;locus_tag=LPH41_RS09540;product=tryptophan synthase subunit beta;protein_id=WP_038271531.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2246491 2247297 . + . ID=gene-LPH41_RS09545;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LPH41_RS09545;old_locus_tag=LPH41_09545 NZ_CP087680.1 Protein Homology CDS 2246491 2247297 . + 0 ID=cds-WP_038271506.1;Parent=gene-LPH41_RS09545;Dbxref=Genbank:WP_038271506.1;Name=WP_038271506.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090667.1;locus_tag=LPH41_RS09545;product=tryptophan synthase subunit alpha;protein_id=WP_038271506.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2248042 2248443 . + . ID=gene-LPH41_RS09550;Name=LPH41_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09550;old_locus_tag=LPH41_09550 NZ_CP087680.1 GeneMarkS-2+ CDS 2248042 2248443 . + 0 ID=cds-WP_038271505.1;Parent=gene-LPH41_RS09550;Dbxref=Genbank:WP_038271505.1;Name=WP_038271505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09550;product=hypothetical protein;protein_id=WP_038271505.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2248771 2250165 . - . ID=gene-LPH41_RS09555;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LPH41_RS09555;old_locus_tag=LPH41_09555 NZ_CP087680.1 Protein Homology CDS 2248771 2250165 . - 0 ID=cds-WP_038271504.1;Parent=gene-LPH41_RS09555;Dbxref=Genbank:WP_038271504.1;Name=WP_038271504.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807912.1;locus_tag=LPH41_RS09555;product=DNA repair protein RadA;protein_id=WP_038271504.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2250355 2251320 . + . ID=gene-LPH41_RS09560;Name=LPH41_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09560;old_locus_tag=LPH41_09560 NZ_CP087680.1 Protein Homology CDS 2250355 2251320 . + 0 ID=cds-WP_038271502.1;Parent=gene-LPH41_RS09560;Dbxref=Genbank:WP_038271502.1;Name=WP_038271502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337749.1;locus_tag=LPH41_RS09560;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_038271502.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2251350 2251514 . - . ID=gene-LPH41_RS09565;Name=LPH41_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09565;old_locus_tag=LPH41_09565 NZ_CP087680.1 GeneMarkS-2+ CDS 2251350 2251514 . - 0 ID=cds-WP_160199308.1;Parent=gene-LPH41_RS09565;Dbxref=Genbank:WP_160199308.1;Name=WP_160199308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09565;product=hypothetical protein;protein_id=WP_160199308.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2251513 2251872 . + . ID=gene-LPH41_RS09570;Name=LPH41_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09570;old_locus_tag=LPH41_09570 NZ_CP087680.1 GeneMarkS-2+ CDS 2251513 2251872 . + 0 ID=cds-WP_152536628.1;Parent=gene-LPH41_RS09570;Dbxref=Genbank:WP_152536628.1;Name=WP_152536628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09570;product=hypothetical protein;protein_id=WP_152536628.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2252036 2252503 . - . ID=gene-LPH41_RS09575;Name=LPH41_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09575;old_locus_tag=LPH41_09575 NZ_CP087680.1 Protein Homology CDS 2252036 2252503 . - 0 ID=cds-WP_038271498.1;Parent=gene-LPH41_RS09575;Dbxref=Genbank:WP_038271498.1;Name=WP_038271498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852759.1;locus_tag=LPH41_RS09575;product=hypothetical protein;protein_id=WP_038271498.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2252629 2254425 . - . ID=gene-LPH41_RS09580;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LPH41_RS09580;old_locus_tag=LPH41_09580 NZ_CP087680.1 Protein Homology CDS 2252629 2254425 . - 0 ID=cds-WP_038271497.1;Parent=gene-LPH41_RS09580;Dbxref=Genbank:WP_038271497.1;Name=WP_038271497.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155540.1;locus_tag=LPH41_RS09580;product=DNA helicase RecQ;protein_id=WP_038271497.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2254630 2255172 . - . ID=gene-LPH41_RS09585;Name=LPH41_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09585;old_locus_tag=LPH41_09585 NZ_CP087680.1 Protein Homology CDS 2254630 2255172 . - 0 ID=cds-WP_038271495.1;Parent=gene-LPH41_RS09585;Dbxref=Genbank:WP_038271495.1;Name=WP_038271495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364158.1;locus_tag=LPH41_RS09585;product=DNA starvation/stationary phase protection protein;protein_id=WP_038271495.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2255256 2259680 . + . ID=gene-LPH41_RS09590;Name=LPH41_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09590;old_locus_tag=LPH41_09590 NZ_CP087680.1 Protein Homology CDS 2255256 2259680 . + 0 ID=cds-WP_230439281.1;Parent=gene-LPH41_RS09590;Dbxref=Genbank:WP_230439281.1;Name=WP_230439281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090678.1;locus_tag=LPH41_RS09590;product=DUF3418 domain-containing protein;protein_id=WP_230439281.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2259677 2261164 . - . ID=gene-LPH41_RS09595;Name=LPH41_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09595;old_locus_tag=LPH41_09595 NZ_CP087680.1 Protein Homology CDS 2259677 2261164 . - 0 ID=cds-WP_230428229.1;Parent=gene-LPH41_RS09595;Dbxref=Genbank:WP_230428229.1;Name=WP_230428229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913680.1;locus_tag=LPH41_RS09595;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_230428229.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2261670 2264591 . + . ID=gene-LPH41_RS09600;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LPH41_RS09600;old_locus_tag=LPH41_09600 NZ_CP087680.1 Protein Homology CDS 2261670 2264591 . + 0 ID=cds-WP_038271491.1;Parent=gene-LPH41_RS09600;Dbxref=Genbank:WP_038271491.1;Name=WP_038271491.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994594.1;locus_tag=LPH41_RS09600;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_038271491.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2265608 2265949 . - . ID=gene-LPH41_RS09605;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LPH41_RS09605;old_locus_tag=LPH41_09605 NZ_CP087680.1 Protein Homology CDS 2265608 2265949 . - 0 ID=cds-WP_038271490.1;Parent=gene-LPH41_RS09605;Dbxref=Genbank:WP_038271490.1;Name=WP_038271490.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156584.1;locus_tag=LPH41_RS09605;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_038271490.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2265949 2266584 . - . ID=gene-LPH41_RS09610;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LPH41_RS09610;old_locus_tag=LPH41_09610 NZ_CP087680.1 Protein Homology CDS 2265949 2266584 . - 0 ID=cds-WP_171898089.1;Parent=gene-LPH41_RS09610;Dbxref=Genbank:WP_171898089.1;Name=WP_171898089.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoC;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851535.1;locus_tag=LPH41_RS09610;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_171898089.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2266581 2268578 . - . ID=gene-LPH41_RS09615;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LPH41_RS09615;old_locus_tag=LPH41_09615 NZ_CP087680.1 Protein Homology CDS 2266581 2268578 . - 0 ID=cds-WP_038271488.1;Parent=gene-LPH41_RS09615;Dbxref=Genbank:WP_038271488.1;Name=WP_038271488.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472398.1;locus_tag=LPH41_RS09615;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_038271488.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2268578 2269522 . - . ID=gene-LPH41_RS09620;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LPH41_RS09620;old_locus_tag=LPH41_09620 NZ_CP087680.1 Protein Homology CDS 2268578 2269522 . - 0 ID=cds-WP_038271486.1;Parent=gene-LPH41_RS09620;Dbxref=Genbank:WP_038271486.1;Name=WP_038271486.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300511.1;locus_tag=LPH41_RS09620;product=ubiquinol oxidase subunit II;protein_id=WP_038271486.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2270416 2271414 . - . ID=gene-LPH41_RS09625;Name=LPH41_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09625;old_locus_tag=LPH41_09625 NZ_CP087680.1 Protein Homology CDS 2270416 2271414 . - 0 ID=cds-WP_038271484.1;Parent=gene-LPH41_RS09625;Dbxref=Genbank:WP_038271484.1;Name=WP_038271484.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966188.1;locus_tag=LPH41_RS09625;product=polyprenyl synthetase family protein;protein_id=WP_038271484.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2271661 2272143 . + . ID=gene-LPH41_RS09630;Name=LPH41_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09630;old_locus_tag=LPH41_09630 NZ_CP087680.1 Protein Homology CDS 2271661 2272143 . + 0 ID=cds-WP_038271482.1;Parent=gene-LPH41_RS09630;Dbxref=Genbank:WP_038271482.1;Name=WP_038271482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157214.1;locus_tag=LPH41_RS09630;product=single-stranded DNA-binding protein;protein_id=WP_038271482.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2272612 2272794 . - . ID=gene-LPH41_RS09635;Name=LPH41_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09635;old_locus_tag=LPH41_09635 NZ_CP087680.1 GeneMarkS-2+ CDS 2272612 2272794 . - 0 ID=cds-WP_038271481.1;Parent=gene-LPH41_RS09635;Dbxref=Genbank:WP_038271481.1;Name=WP_038271481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09635;product=hypothetical protein;protein_id=WP_038271481.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2272842 2274122 . - . ID=gene-LPH41_RS09640;Name=LPH41_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09640;old_locus_tag=LPH41_09640 NZ_CP087680.1 Protein Homology CDS 2272842 2274122 . - 0 ID=cds-WP_230428293.1;Parent=gene-LPH41_RS09640;Dbxref=Genbank:WP_230428293.1;Name=WP_230428293.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438591.1;locus_tag=LPH41_RS09640;product=S8 family serine peptidase;protein_id=WP_230428293.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2274182 2274835 . - . ID=gene-LPH41_RS09645;Name=LPH41_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09645;old_locus_tag=LPH41_09645 NZ_CP087680.1 Protein Homology CDS 2274182 2274835 . - 0 ID=cds-WP_038271474.1;Parent=gene-LPH41_RS09645;Dbxref=Genbank:WP_038271474.1;Name=WP_038271474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169443.1;locus_tag=LPH41_RS09645;product=hypothetical protein;protein_id=WP_038271474.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2274832 2275413 . - . ID=gene-LPH41_RS09650;Name=LPH41_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09650;old_locus_tag=LPH41_09650 NZ_CP087680.1 Protein Homology CDS 2274832 2275413 . - 0 ID=cds-WP_038271473.1;Parent=gene-LPH41_RS09650;Dbxref=Genbank:WP_038271473.1;Name=WP_038271473.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019464587.1;locus_tag=LPH41_RS09650;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_038271473.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2275480 2276145 . - . ID=gene-LPH41_RS09655;Name=LPH41_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09655;old_locus_tag=LPH41_09655 NZ_CP087680.1 GeneMarkS-2+ CDS 2275480 2276145 . - 0 ID=cds-WP_051482337.1;Parent=gene-LPH41_RS09655;Dbxref=Genbank:WP_051482337.1;Name=WP_051482337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09655;product=hypothetical protein;protein_id=WP_051482337.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2276936 2277172 . - . ID=gene-LPH41_RS09660;Name=LPH41_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09660;old_locus_tag=LPH41_09660 NZ_CP087680.1 GeneMarkS-2+ CDS 2276936 2277172 . - 0 ID=cds-WP_038271471.1;Parent=gene-LPH41_RS09660;Dbxref=Genbank:WP_038271471.1;Name=WP_038271471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09660;product=hypothetical protein;protein_id=WP_038271471.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2277472 2277642 . - . ID=gene-LPH41_RS09665;Name=LPH41_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09665;old_locus_tag=LPH41_09665 NZ_CP087680.1 GeneMarkS-2+ CDS 2277472 2277642 . - 0 ID=cds-WP_160165189.1;Parent=gene-LPH41_RS09665;Dbxref=Genbank:WP_160165189.1;Name=WP_160165189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09665;product=hypothetical protein;protein_id=WP_160165189.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2279285 2279515 . - . ID=gene-LPH41_RS09670;Name=LPH41_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09670;old_locus_tag=LPH41_09670 NZ_CP087680.1 Protein Homology CDS 2279285 2279515 . - 0 ID=cds-WP_230428292.1;Parent=gene-LPH41_RS09670;Dbxref=Genbank:WP_230428292.1;Name=WP_230428292.1;Ontology_term=GO:0009372,GO:0017148,GO:0044010;gbkey=CDS;go_process=quorum sensing|0009372||IEA,negative regulation of translation|0017148||IEA,single-species biofilm formation|0044010||IEA;inference=COORDINATES: protein motif:HMM:NF027059.2;locus_tag=LPH41_RS09670;product=type II toxin-antitoxin system MqsR family toxin;protein_id=WP_230428292.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2279831 2280742 . + . ID=gene-LPH41_RS09675;Name=LPH41_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09675;old_locus_tag=LPH41_09675 NZ_CP087680.1 Protein Homology CDS 2279831 2280742 . + 0 ID=cds-WP_038271469.1;Parent=gene-LPH41_RS09675;Dbxref=Genbank:WP_038271469.1;Name=WP_038271469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850889.1;locus_tag=LPH41_RS09675;product=class I SAM-dependent methyltransferase;protein_id=WP_038271469.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2281967 2283157 . + . ID=gene-LPH41_RS09680;Name=LPH41_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09680;old_locus_tag=LPH41_09680 NZ_CP087680.1 Protein Homology CDS 2281967 2283157 . + 0 ID=cds-WP_051482339.1;Parent=gene-LPH41_RS09680;Dbxref=Genbank:WP_051482339.1;Name=WP_051482339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089227.1;locus_tag=LPH41_RS09680;product=cation:proton antiporter;protein_id=WP_051482339.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2283840 2284367 . - . ID=gene-LPH41_RS09685;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LPH41_RS09685;old_locus_tag=LPH41_09685 NZ_CP087680.1 Protein Homology CDS 2283840 2284367 . - 0 ID=cds-WP_051482336.1;Parent=gene-LPH41_RS09685;Dbxref=Genbank:WP_051482336.1;Name=WP_051482336.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089226.1;locus_tag=LPH41_RS09685;product=lactoylglutathione lyase;protein_id=WP_051482336.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2284872 2286233 . - . ID=gene-LPH41_RS09690;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LPH41_RS09690;old_locus_tag=LPH41_09690 NZ_CP087680.1 Protein Homology CDS 2284872 2286233 . - 0 ID=cds-WP_038271466.1;Parent=gene-LPH41_RS09690;Dbxref=Genbank:WP_038271466.1;Name=WP_038271466.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008266103.1;locus_tag=LPH41_RS09690;product=magnesium transporter;protein_id=WP_038271466.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2286344 2288071 . - . ID=gene-LPH41_RS09695;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LPH41_RS09695;old_locus_tag=LPH41_09695 NZ_CP087680.1 Protein Homology CDS 2286344 2288071 . - 0 ID=cds-WP_038271465.1;Parent=gene-LPH41_RS09695;Dbxref=Genbank:WP_038271465.1;Name=WP_038271465.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097727.1;locus_tag=LPH41_RS09695;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_038271465.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2288112 2288381 . - . ID=gene-LPH41_RS09700;Name=LPH41_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09700;old_locus_tag=LPH41_09700 NZ_CP087680.1 Protein Homology CDS 2288112 2288381 . - 0 ID=cds-WP_038271464.1;Parent=gene-LPH41_RS09700;Dbxref=Genbank:WP_038271464.1;Name=WP_038271464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237443.1;locus_tag=LPH41_RS09700;product=HPr family phosphocarrier protein;protein_id=WP_038271464.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2288374 2288766 . - . ID=gene-LPH41_RS09705;Name=LPH41_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09705;old_locus_tag=LPH41_09705 NZ_CP087680.1 Protein Homology CDS 2288374 2288766 . - 0 ID=cds-WP_038271463.1;Parent=gene-LPH41_RS09705;Dbxref=Genbank:WP_038271463.1;Name=WP_038271463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154797.1;locus_tag=LPH41_RS09705;product=PTS fructose IIA component family protein;protein_id=WP_038271463.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2289752 2290624 . - . ID=gene-LPH41_RS09710;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LPH41_RS09710;old_locus_tag=LPH41_09710 NZ_CP087680.1 Protein Homology CDS 2289752 2290624 . - 0 ID=cds-WP_038271462.1;Parent=gene-LPH41_RS09710;Dbxref=Genbank:WP_038271462.1;Name=WP_038271462.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850895.1;locus_tag=LPH41_RS09710;product=RNase adapter RapZ;protein_id=WP_038271462.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2290621 2291571 . - . ID=gene-LPH41_RS09715;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LPH41_RS09715;old_locus_tag=LPH41_09715 NZ_CP087680.1 Protein Homology CDS 2290621 2291571 . - 0 ID=cds-WP_114867170.1;Parent=gene-LPH41_RS09715;Dbxref=Genbank:WP_114867170.1;Name=WP_114867170.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425835.1;locus_tag=LPH41_RS09715;product=HPr(Ser) kinase/phosphatase;protein_id=WP_114867170.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2291874 2292191 . - . ID=gene-LPH41_RS09720;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LPH41_RS09720;old_locus_tag=LPH41_09720 NZ_CP087680.1 Protein Homology CDS 2291874 2292191 . - 0 ID=cds-WP_038271460.1;Parent=gene-LPH41_RS09720;Dbxref=Genbank:WP_038271460.1;Name=WP_038271460.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083778.1;locus_tag=LPH41_RS09720;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_038271460.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2292297 2293673 . - . ID=gene-LPH41_RS09725;Name=LPH41_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09725;old_locus_tag=LPH41_09725 NZ_CP087680.1 Protein Homology CDS 2292297 2293673 . - 0 ID=cds-WP_038271528.1;Parent=gene-LPH41_RS09725;Dbxref=Genbank:WP_038271528.1;Name=WP_038271528.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185406.1;locus_tag=LPH41_RS09725;product=RNA polymerase factor sigma-54;protein_id=WP_038271528.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2293720 2294442 . - . ID=gene-LPH41_RS09730;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LPH41_RS09730;old_locus_tag=LPH41_09730 NZ_CP087680.1 Protein Homology CDS 2293720 2294442 . - 0 ID=cds-WP_038271459.1;Parent=gene-LPH41_RS09730;Dbxref=Genbank:WP_038271459.1;Name=WP_038271459.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913374.1;locus_tag=LPH41_RS09730;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_038271459.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2294442 2294882 . - . ID=gene-LPH41_RS09735;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LPH41_RS09735;old_locus_tag=LPH41_09735 NZ_CP087680.1 Protein Homology CDS 2294442 2294882 . - 0 ID=cds-WP_230428291.1;Parent=gene-LPH41_RS09735;Dbxref=Genbank:WP_230428291.1;Name=WP_230428291.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893912.1;locus_tag=LPH41_RS09735;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_230428291.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2294953 2295522 . - . ID=gene-LPH41_RS09740;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LPH41_RS09740;old_locus_tag=LPH41_09740 NZ_CP087680.1 Protein Homology CDS 2294953 2295522 . - 0 ID=cds-WP_114867169.1;Parent=gene-LPH41_RS09740;Dbxref=Genbank:WP_114867169.1;Name=WP_114867169.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850898.1;locus_tag=LPH41_RS09740;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_114867169.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2295519 2296067 . - . ID=gene-LPH41_RS09745;Name=LPH41_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09745;old_locus_tag=LPH41_09745 NZ_CP087680.1 Protein Homology CDS 2295519 2296067 . - 0 ID=cds-WP_038272254.1;Parent=gene-LPH41_RS09745;Dbxref=Genbank:WP_038272254.1;Name=WP_038272254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508473.1;locus_tag=LPH41_RS09745;product=HAD family hydrolase;protein_id=WP_038272254.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2296087 2297088 . - . ID=gene-LPH41_RS09750;Name=LPH41_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09750;old_locus_tag=LPH41_09750 NZ_CP087680.1 Protein Homology CDS 2296087 2297088 . - 0 ID=cds-WP_038272251.1;Parent=gene-LPH41_RS09750;Dbxref=Genbank:WP_038272251.1;Name=WP_038272251.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993233.1;locus_tag=LPH41_RS09750;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_038272251.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2297113 2297377 . + . ID=gene-LPH41_RS09755;Name=LPH41_RS09755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS09755;old_locus_tag=LPH41_09755;pseudo=true NZ_CP087680.1 Protein Homology CDS 2297113 2297377 . + 0 ID=cds-LPH41_RS09755;Parent=gene-LPH41_RS09755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407890.1;locus_tag=LPH41_RS09755;product=BolA/IbaG family iron-sulfur metabolism protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2297435 2298712 . + . ID=gene-LPH41_RS09760;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LPH41_RS09760;old_locus_tag=LPH41_09760 NZ_CP087680.1 Protein Homology CDS 2297435 2298712 . + 0 ID=cds-WP_038272246.1;Parent=gene-LPH41_RS09760;Dbxref=Genbank:WP_038272246.1;Name=WP_038272246.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437778.1;locus_tag=LPH41_RS09760;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_038272246.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2298709 2299017 . + . ID=gene-LPH41_RS09765;Name=LPH41_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09765;old_locus_tag=LPH41_09765 NZ_CP087680.1 Protein Homology CDS 2298709 2299017 . + 0 ID=cds-WP_038272244.1;Parent=gene-LPH41_RS09765;Dbxref=Genbank:WP_038272244.1;Name=WP_038272244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097729.1;locus_tag=LPH41_RS09765;product=hypothetical protein;protein_id=WP_038272244.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2299920 2303894 . - . ID=gene-LPH41_RS09770;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=LPH41_RS09770;old_locus_tag=LPH41_09770 NZ_CP087680.1 Protein Homology CDS 2299920 2303894 . - 0 ID=cds-WP_038272267.1;Parent=gene-LPH41_RS09770;Dbxref=Genbank:WP_038272267.1;Name=WP_038272267.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367790.1;locus_tag=LPH41_RS09770;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_038272267.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2304091 2304879 . - . ID=gene-LPH41_RS09775;Name=LPH41_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09775;old_locus_tag=LPH41_09775 NZ_CP087680.1 Protein Homology CDS 2304091 2304879 . - 0 ID=cds-WP_038272243.1;Parent=gene-LPH41_RS09775;Dbxref=Genbank:WP_038272243.1;Name=WP_038272243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850905.1;locus_tag=LPH41_RS09775;product=DsbC family protein;protein_id=WP_038272243.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2305011 2305985 . - . ID=gene-LPH41_RS09780;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LPH41_RS09780;old_locus_tag=LPH41_09780 NZ_CP087680.1 Protein Homology CDS 2305011 2305985 . - 0 ID=cds-WP_038272241.1;Parent=gene-LPH41_RS09780;Dbxref=Genbank:WP_038272241.1;Name=WP_038272241.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932805.1;locus_tag=LPH41_RS09780;product=site-specific tyrosine recombinase XerD;protein_id=WP_038272241.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2306246 2307142 . - . ID=gene-LPH41_RS09785;Name=LPH41_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09785;old_locus_tag=LPH41_09785 NZ_CP087680.1 Protein Homology CDS 2306246 2307142 . - 0 ID=cds-WP_038272238.1;Parent=gene-LPH41_RS09785;Dbxref=Genbank:WP_038272238.1;Name=WP_038272238.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083762.1;locus_tag=LPH41_RS09785;product=ion transporter;protein_id=WP_038272238.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2307210 2308445 . + . ID=gene-LPH41_RS09790;Name=LPH41_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09790;old_locus_tag=LPH41_09790 NZ_CP087680.1 Protein Homology CDS 2307210 2308445 . + 0 ID=cds-WP_038272236.1;Parent=gene-LPH41_RS09790;Dbxref=Genbank:WP_038272236.1;Name=WP_038272236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577885.1;locus_tag=LPH41_RS09790;product=acetylornithine transaminase;protein_id=WP_038272236.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2308454 2308591 . + . ID=gene-LPH41_RS09795;Name=LPH41_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09795;old_locus_tag=LPH41_09795 NZ_CP087680.1 GeneMarkS-2+ CDS 2308454 2308591 . + 0 ID=cds-WP_160165211.1;Parent=gene-LPH41_RS09795;Dbxref=Genbank:WP_160165211.1;Name=WP_160165211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09795;product=hypothetical protein;protein_id=WP_160165211.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2308886 2310250 . - . ID=gene-LPH41_RS09800;Name=LPH41_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09800;old_locus_tag=LPH41_09800 NZ_CP087680.1 Protein Homology CDS 2308886 2310250 . - 0 ID=cds-WP_038272234.1;Parent=gene-LPH41_RS09800;Dbxref=Genbank:WP_038272234.1;Name=WP_038272234.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=LPH41_RS09800;product=glutamate--cysteine ligase;protein_id=WP_038272234.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2310451 2311062 . - . ID=gene-LPH41_RS09805;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LPH41_RS09805;old_locus_tag=LPH41_09805 NZ_CP087680.1 Protein Homology CDS 2310451 2311062 . - 0 ID=cds-WP_038272231.1;Parent=gene-LPH41_RS09805;Dbxref=Genbank:WP_038272231.1;Name=WP_038272231.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299877.1;locus_tag=LPH41_RS09805;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_038272231.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2311447 2311581 . + . ID=gene-LPH41_RS12050;Name=LPH41_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12050 NZ_CP087680.1 GeneMarkS-2+ CDS 2311447 2311581 . + 0 ID=cds-WP_267903156.1;Parent=gene-LPH41_RS12050;Dbxref=Genbank:WP_267903156.1;Name=WP_267903156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12050;product=hypothetical protein;protein_id=WP_267903156.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2312046 2312702 . + . ID=gene-LPH41_RS09810;Name=LPH41_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09810;old_locus_tag=LPH41_09810 NZ_CP087680.1 Protein Homology CDS 2312046 2312702 . + 0 ID=cds-WP_038272264.1;Parent=gene-LPH41_RS09810;Dbxref=Genbank:WP_038272264.1;Name=WP_038272264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183737.1;locus_tag=LPH41_RS09810;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_038272264.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2312783 2313550 . + . ID=gene-LPH41_RS09815;Name=LPH41_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09815;old_locus_tag=LPH41_09815 NZ_CP087680.1 Protein Homology CDS 2312783 2313550 . + 0 ID=cds-WP_038272261.1;Parent=gene-LPH41_RS09815;Dbxref=Genbank:WP_038272261.1;Name=WP_038272261.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850913.1;locus_tag=LPH41_RS09815;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_038272261.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2313566 2314333 . + . ID=gene-LPH41_RS09820;Name=LPH41_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09820;old_locus_tag=LPH41_09820 NZ_CP087680.1 Protein Homology CDS 2313566 2314333 . + 0 ID=cds-WP_038272225.1;Parent=gene-LPH41_RS09820;Dbxref=Genbank:WP_038272225.1;Name=WP_038272225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260285.1;locus_tag=LPH41_RS09820;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_038272225.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2314956 2315246 . - . ID=gene-LPH41_RS09825;Name=LPH41_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09825;old_locus_tag=LPH41_09825 NZ_CP087680.1 GeneMarkS-2+ CDS 2314956 2315246 . - 0 ID=cds-WP_038272223.1;Parent=gene-LPH41_RS09825;Dbxref=Genbank:WP_038272223.1;Name=WP_038272223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09825;product=hypothetical protein;protein_id=WP_038272223.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2315795 2316409 . - . ID=gene-LPH41_RS09830;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=LPH41_RS09830;old_locus_tag=LPH41_09830 NZ_CP087680.1 Protein Homology CDS 2315795 2316409 . - 0 ID=cds-WP_038272221.1;Parent=gene-LPH41_RS09830;Dbxref=Genbank:WP_038272221.1;Name=WP_038272221.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893940.1;locus_tag=LPH41_RS09830;product=high frequency lysogenization protein HflD;protein_id=WP_038272221.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2316422 2317546 . - . ID=gene-LPH41_RS09835;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LPH41_RS09835;old_locus_tag=LPH41_09835 NZ_CP087680.1 Protein Homology CDS 2316422 2317546 . - 0 ID=cds-WP_038272219.1;Parent=gene-LPH41_RS09835;Dbxref=Genbank:WP_038272219.1;Name=WP_038272219.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575784.1;locus_tag=LPH41_RS09835;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_038272219.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2317543 2318001 . - . ID=gene-LPH41_RS09840;Name=LPH41_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09840;old_locus_tag=LPH41_09840 NZ_CP087680.1 Protein Homology CDS 2317543 2318001 . - 0 ID=cds-WP_038272217.1;Parent=gene-LPH41_RS09840;Dbxref=Genbank:WP_038272217.1;Name=WP_038272217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083752.1;locus_tag=LPH41_RS09840;product=NUDIX hydrolase;protein_id=WP_038272217.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2318203 2318523 . + . ID=gene-LPH41_RS09845;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LPH41_RS09845;old_locus_tag=LPH41_09845 NZ_CP087680.1 Protein Homology CDS 2318203 2318523 . + 0 ID=cds-WP_038272215.1;Parent=gene-LPH41_RS09845;Dbxref=Genbank:WP_038272215.1;Name=WP_038272215.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914463.1;locus_tag=LPH41_RS09845;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_038272215.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2318652 2320928 . + . ID=gene-LPH41_RS09850;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LPH41_RS09850;old_locus_tag=LPH41_09850 NZ_CP087680.1 Protein Homology CDS 2318652 2320928 . + 0 ID=cds-WP_038272214.1;Parent=gene-LPH41_RS09850;Dbxref=Genbank:WP_038272214.1;Name=WP_038272214.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901749.1;locus_tag=LPH41_RS09850;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_038272214.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2321259 2321477 . - . ID=gene-LPH41_RS09855;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LPH41_RS09855;old_locus_tag=LPH41_09855 NZ_CP087680.1 Protein Homology CDS 2321259 2321477 . - 0 ID=cds-WP_038272213.1;Parent=gene-LPH41_RS09855;Dbxref=Genbank:WP_038272213.1;Name=WP_038272213.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553999.1;locus_tag=LPH41_RS09855;product=translation initiation factor IF-1;protein_id=WP_038272213.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2321594 2322325 . - . ID=gene-LPH41_RS09860;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LPH41_RS09860;old_locus_tag=LPH41_09860 NZ_CP087680.1 Protein Homology CDS 2321594 2322325 . - 0 ID=cds-WP_038272210.1;Parent=gene-LPH41_RS09860;Dbxref=Genbank:WP_038272210.1;Name=WP_038272210.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089137.1;locus_tag=LPH41_RS09860;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_038272210.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2322336 2323472 . - . ID=gene-LPH41_RS09865;Name=LPH41_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09865;old_locus_tag=LPH41_09865 NZ_CP087680.1 Protein Homology CDS 2322336 2323472 . - 0 ID=cds-WP_038272208.1;Parent=gene-LPH41_RS09865;Dbxref=Genbank:WP_038272208.1;Name=WP_038272208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850918.1;locus_tag=LPH41_RS09865;product=GNAT family N-acetyltransferase;protein_id=WP_038272208.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2323916 2324881 . - . ID=gene-LPH41_RS09870;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LPH41_RS09870;old_locus_tag=LPH41_09870 NZ_CP087680.1 Protein Homology CDS 2323916 2324881 . - 0 ID=cds-WP_038272206.1;Parent=gene-LPH41_RS09870;Dbxref=Genbank:WP_038272206.1;Name=WP_038272206.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006366671.1;locus_tag=LPH41_RS09870;product=thioredoxin-disulfide reductase;protein_id=WP_038272206.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2325154 2327508 . + . ID=gene-LPH41_RS09875;Name=LPH41_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09875;old_locus_tag=LPH41_09875 NZ_CP087680.1 Protein Homology CDS 2325154 2327508 . + 0 ID=cds-WP_038272204.1;Parent=gene-LPH41_RS09875;Dbxref=Genbank:WP_038272204.1;Name=WP_038272204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083745.1;locus_tag=LPH41_RS09875;product=DNA translocase FtsK;protein_id=WP_038272204.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2327702 2329576 . + . ID=gene-LPH41_RS09880;Name=LPH41_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09880;old_locus_tag=LPH41_09880 NZ_CP087680.1 Protein Homology CDS 2327702 2329576 . + 0 ID=cds-WP_230428290.1;Parent=gene-LPH41_RS09880;Dbxref=Genbank:WP_230428290.1;Name=WP_230428290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850921.1;locus_tag=LPH41_RS09880;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_230428290.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2330593 2330835 . + . ID=gene-LPH41_RS09885;Name=LPH41_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09885;old_locus_tag=LPH41_09885 NZ_CP087680.1 GeneMarkS-2+ CDS 2330593 2330835 . + 0 ID=cds-WP_038272200.1;Parent=gene-LPH41_RS09885;Dbxref=Genbank:WP_038272200.1;Name=WP_038272200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09885;product=hypothetical protein;protein_id=WP_038272200.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2330898 2331524 . + . ID=gene-LPH41_RS09890;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LPH41_RS09890;old_locus_tag=LPH41_09890 NZ_CP087680.1 Protein Homology CDS 2330898 2331524 . + 0 ID=cds-WP_038272259.1;Parent=gene-LPH41_RS09890;Dbxref=Genbank:WP_038272259.1;Name=WP_038272259.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089126.1;locus_tag=LPH41_RS09890;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_038272259.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2331739 2333028 . + . ID=gene-LPH41_RS09895;Name=LPH41_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09895;old_locus_tag=LPH41_09895 NZ_CP087680.1 Protein Homology CDS 2331739 2333028 . + 0 ID=cds-WP_201745741.1;Parent=gene-LPH41_RS09895;Dbxref=Genbank:WP_201745741.1;Name=WP_201745741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507724.1;locus_tag=LPH41_RS09895;product=replication-associated recombination protein A;protein_id=WP_201745741.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2333190 2333603 . + . ID=gene-LPH41_RS09900;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LPH41_RS09900;old_locus_tag=LPH41_09900 NZ_CP087680.1 Protein Homology CDS 2333190 2333603 . + 0 ID=cds-WP_038272195.1;Parent=gene-LPH41_RS09900;Dbxref=Genbank:WP_038272195.1;Name=WP_038272195.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448736.1;locus_tag=LPH41_RS09900;product=fluoride efflux transporter CrcB;protein_id=WP_038272195.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2333961 2334104 . + . ID=gene-LPH41_RS09905;Name=LPH41_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09905;old_locus_tag=LPH41_09905 NZ_CP087680.1 GeneMarkS-2+ CDS 2333961 2334104 . + 0 ID=cds-WP_160165210.1;Parent=gene-LPH41_RS09905;Dbxref=Genbank:WP_160165210.1;Name=WP_160165210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09905;product=hypothetical protein;protein_id=WP_160165210.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2335157 2335321 . + . ID=gene-LPH41_RS09910;Name=LPH41_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09910;old_locus_tag=LPH41_09910 NZ_CP087680.1 GeneMarkS-2+ CDS 2335157 2335321 . + 0 ID=cds-WP_160165209.1;Parent=gene-LPH41_RS09910;Dbxref=Genbank:WP_160165209.1;Name=WP_160165209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09910;product=hypothetical protein;protein_id=WP_160165209.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2335904 2337400 . + . ID=gene-LPH41_RS09915;Name=LPH41_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09915;old_locus_tag=LPH41_09915 NZ_CP087680.1 Protein Homology CDS 2335904 2337400 . + 0 ID=cds-WP_038272192.1;Parent=gene-LPH41_RS09915;Dbxref=Genbank:WP_038272192.1;Name=WP_038272192.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850924.1;locus_tag=LPH41_RS09915;product=response regulator;protein_id=WP_038272192.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2337533 2337904 . + . ID=gene-LPH41_RS09920;Name=LPH41_RS09920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS09920;old_locus_tag=LPH41_09920;pseudo=true NZ_CP087680.1 Protein Homology CDS 2337533 2337904 . + 0 ID=cds-LPH41_RS09920;Parent=gene-LPH41_RS09920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089110.1;locus_tag=LPH41_RS09920;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2337911 2338636 . - . ID=gene-LPH41_RS09925;Name=LPH41_RS09925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS09925;old_locus_tag=LPH41_09925;pseudo=true NZ_CP087680.1 Protein Homology CDS 2337911 2338636 . - 0 ID=cds-LPH41_RS09925;Parent=gene-LPH41_RS09925;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303260.1;locus_tag=LPH41_RS09925;product=pteridine reductase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2338712 2339896 . + . ID=gene-LPH41_RS09930;Name=LPH41_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09930;old_locus_tag=LPH41_09930 NZ_CP087680.1 Protein Homology CDS 2338712 2339896 . + 0 ID=cds-WP_038272190.1;Parent=gene-LPH41_RS09930;Dbxref=Genbank:WP_038272190.1;Name=WP_038272190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368204.1;locus_tag=LPH41_RS09930;product=class I SAM-dependent methyltransferase;protein_id=WP_038272190.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2339926 2340297 . + . ID=gene-LPH41_RS09935;Name=LPH41_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09935;old_locus_tag=LPH41_09935 NZ_CP087680.1 Protein Homology CDS 2339926 2340297 . + 0 ID=cds-WP_230428228.1;Parent=gene-LPH41_RS09935;Dbxref=Genbank:WP_230428228.1;Name=WP_230428228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607683.1;locus_tag=LPH41_RS09935;product=antibiotic resistance protein VanZ;protein_id=WP_230428228.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2340321 2341325 . - . ID=gene-LPH41_RS09940;Name=LPH41_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09940;old_locus_tag=LPH41_09940 NZ_CP087680.1 Protein Homology CDS 2340321 2341325 . - 0 ID=cds-WP_114867222.1;Parent=gene-LPH41_RS09940;Dbxref=Genbank:WP_114867222.1;Name=WP_114867222.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083735.1;locus_tag=LPH41_RS09940;product=glucokinase;protein_id=WP_114867222.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2341730 2341891 . + . ID=gene-LPH41_RS09945;Name=LPH41_RS09945;end_range=2341891,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS09945;old_locus_tag=LPH41_09945;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 2341730 2341891 . + 0 ID=cds-LPH41_RS09945;Parent=gene-LPH41_RS09945;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;end_range=2341891,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156688.1;locus_tag=LPH41_RS09945;partial=true;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2341956 2343245 . + . ID=gene-LPH41_RS09950;Name=gluP;gbkey=Gene;gene=gluP;gene_biotype=protein_coding;locus_tag=LPH41_RS09950;old_locus_tag=LPH41_09950 NZ_CP087680.1 Protein Homology CDS 2341956 2343245 . + 0 ID=cds-WP_038271879.1;Parent=gene-LPH41_RS09950;Dbxref=Genbank:WP_038271879.1;Name=WP_038271879.1;gbkey=CDS;gene=gluP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850931.1;locus_tag=LPH41_RS09950;product=glucose/galactose MFS transporter;protein_id=WP_038271879.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2343249 2344305 . + . ID=gene-LPH41_RS09955;Name=LPH41_RS09955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS09955;old_locus_tag=LPH41_09955;pseudo=true NZ_CP087680.1 Protein Homology CDS 2343249 2344305 . + 0 ID=cds-LPH41_RS09955;Parent=gene-LPH41_RS09955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850932.1;locus_tag=LPH41_RS09955;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2344314 2345342 . + . ID=gene-LPH41_RS09960;Name=LPH41_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09960;old_locus_tag=LPH41_09960 NZ_CP087680.1 Protein Homology CDS 2344314 2345342 . + 0 ID=cds-WP_038271975.1;Parent=gene-LPH41_RS09960;Dbxref=Genbank:WP_038271975.1;Name=WP_038271975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005419331.1;locus_tag=LPH41_RS09960;product=SIS domain-containing protein;protein_id=WP_038271975.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2345339 2346499 . + . ID=gene-LPH41_RS09965;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LPH41_RS09965;old_locus_tag=LPH41_09965 NZ_CP087680.1 Protein Homology CDS 2345339 2346499 . + 0 ID=cds-WP_171898054.1;Parent=gene-LPH41_RS09965;Dbxref=Genbank:WP_171898054.1;Name=WP_171898054.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974066.1;locus_tag=LPH41_RS09965;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_171898054.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2347652 2347945 . + . ID=gene-LPH41_RS09970;Name=LPH41_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09970;old_locus_tag=LPH41_09970 NZ_CP087680.1 GeneMarkS-2+ CDS 2347652 2347945 . + 0 ID=cds-WP_152536645.1;Parent=gene-LPH41_RS09970;Dbxref=Genbank:WP_152536645.1;Name=WP_152536645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS09970;product=hypothetical protein;protein_id=WP_152536645.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2348171 2349067 . + . ID=gene-LPH41_RS09975;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LPH41_RS09975;old_locus_tag=LPH41_09975 NZ_CP087680.1 Protein Homology CDS 2348171 2349067 . + 0 ID=cds-WP_038271891.1;Parent=gene-LPH41_RS09975;Dbxref=Genbank:WP_038271891.1;Name=WP_038271891.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893968.1;locus_tag=LPH41_RS09975;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_038271891.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2349064 2350410 . + . ID=gene-LPH41_RS09980;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LPH41_RS09980;old_locus_tag=LPH41_09980 NZ_CP087680.1 Protein Homology CDS 2349064 2350410 . + 0 ID=cds-WP_038271893.1;Parent=gene-LPH41_RS09980;Dbxref=Genbank:WP_038271893.1;Name=WP_038271893.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300396.1;locus_tag=LPH41_RS09980;product=phosphoglucosamine mutase;protein_id=WP_038271893.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2350531 2351385 . - . ID=gene-LPH41_RS09985;Name=LPH41_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09985;old_locus_tag=LPH41_09985 NZ_CP087680.1 Protein Homology CDS 2350531 2351385 . - 0 ID=cds-WP_038271895.1;Parent=gene-LPH41_RS09985;Dbxref=Genbank:WP_038271895.1;Name=WP_038271895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083728.1;locus_tag=LPH41_RS09985;product=polysaccharide deacetylase family protein;protein_id=WP_038271895.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2351382 2352527 . - . ID=gene-LPH41_RS09990;Name=LPH41_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09990;old_locus_tag=LPH41_09990 NZ_CP087680.1 Protein Homology CDS 2351382 2352527 . - 0 ID=cds-WP_038271897.1;Parent=gene-LPH41_RS09990;Dbxref=Genbank:WP_038271897.1;Name=WP_038271897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850935.1;locus_tag=LPH41_RS09990;product=glycosyltransferase family 4 protein;protein_id=WP_038271897.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2353395 2353724 . - . ID=gene-LPH41_RS09995;Name=LPH41_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS09995;old_locus_tag=LPH41_09995 NZ_CP087680.1 Protein Homology CDS 2353395 2353724 . - 0 ID=cds-WP_081755464.1;Parent=gene-LPH41_RS09995;Dbxref=Genbank:WP_081755464.1;Name=WP_081755464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508448.1;locus_tag=LPH41_RS09995;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_081755464.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2354040 2355290 . - . ID=gene-LPH41_RS10000;Name=LPH41_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10000;old_locus_tag=LPH41_10000 NZ_CP087680.1 Protein Homology CDS 2354040 2355290 . - 0 ID=cds-WP_038271903.1;Parent=gene-LPH41_RS10000;Dbxref=Genbank:WP_038271903.1;Name=WP_038271903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337770.1;locus_tag=LPH41_RS10000;product=cysteine desulfurase;protein_id=WP_038271903.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2355278 2356546 . - . ID=gene-LPH41_RS10005;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LPH41_RS10005;old_locus_tag=LPH41_10005 NZ_CP087680.1 Protein Homology CDS 2355278 2356546 . - 0 ID=cds-WP_038271905.1;Parent=gene-LPH41_RS10005;Dbxref=Genbank:WP_038271905.1;Name=WP_038271905.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090672.1;locus_tag=LPH41_RS10005;product=Fe-S cluster assembly protein SufD;protein_id=WP_038271905.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2356543 2357382 . - . ID=gene-LPH41_RS10010;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LPH41_RS10010;old_locus_tag=LPH41_10010 NZ_CP087680.1 Protein Homology CDS 2356543 2357382 . - 0 ID=cds-WP_051482354.1;Parent=gene-LPH41_RS10010;Dbxref=Genbank:WP_051482354.1;Name=WP_051482354.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893976.1;locus_tag=LPH41_RS10010;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_051482354.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2357512 2358969 . - . ID=gene-LPH41_RS10015;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LPH41_RS10015;old_locus_tag=LPH41_10015 NZ_CP087680.1 Protein Homology CDS 2357512 2358969 . - 0 ID=cds-WP_038271907.1;Parent=gene-LPH41_RS10015;Dbxref=Genbank:WP_038271907.1;Name=WP_038271907.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902344.1;locus_tag=LPH41_RS10015;product=Fe-S cluster assembly protein SufB;protein_id=WP_038271907.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2358989 2359450 . - . ID=gene-LPH41_RS10020;Name=LPH41_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10020;old_locus_tag=LPH41_10020 NZ_CP087680.1 Protein Homology CDS 2358989 2359450 . - 0 ID=cds-WP_038271908.1;Parent=gene-LPH41_RS10020;Dbxref=Genbank:WP_038271908.1;Name=WP_038271908.1;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369303.1;locus_tag=LPH41_RS10020;product=SUF system Fe-S cluster assembly regulator;protein_id=WP_038271908.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2359615 2360082 . + . ID=gene-LPH41_RS10025;Name=LPH41_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10025;old_locus_tag=LPH41_10025 NZ_CP087680.1 Protein Homology CDS 2359615 2360082 . + 0 ID=cds-WP_038271909.1;Parent=gene-LPH41_RS10025;Dbxref=Genbank:WP_038271909.1;Name=WP_038271909.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237451.1;locus_tag=LPH41_RS10025;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=WP_038271909.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2361503 2363662 . + . ID=gene-LPH41_RS10030;Name=LPH41_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10030;old_locus_tag=LPH41_10030 NZ_CP087680.1 Protein Homology CDS 2361503 2363662 . + 0 ID=cds-WP_038271911.1;Parent=gene-LPH41_RS10030;Dbxref=Genbank:WP_038271911.1;Name=WP_038271911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607685.1;locus_tag=LPH41_RS10030;product=oligopeptidase B;protein_id=WP_038271911.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2363753 2363962 . + . ID=gene-LPH41_RS10035;Name=LPH41_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10035;old_locus_tag=LPH41_10035 NZ_CP087680.1 Protein Homology CDS 2363753 2363962 . + 0 ID=cds-WP_038271914.1;Parent=gene-LPH41_RS10035;Dbxref=Genbank:WP_038271914.1;Name=WP_038271914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089059.1;locus_tag=LPH41_RS10035;product=lipoprotein;protein_id=WP_038271914.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2363972 2364826 . + . ID=gene-LPH41_RS10040;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LPH41_RS10040;old_locus_tag=LPH41_10040 NZ_CP087680.1 Protein Homology CDS 2363972 2364826 . + 0 ID=cds-WP_038271979.1;Parent=gene-LPH41_RS10040;Dbxref=Genbank:WP_038271979.1;Name=WP_038271979.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850942.1;locus_tag=LPH41_RS10040;product=diaminopimelate epimerase;protein_id=WP_038271979.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2364823 2365494 . + . ID=gene-LPH41_RS10045;Name=LPH41_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10045;old_locus_tag=LPH41_10045 NZ_CP087680.1 Protein Homology CDS 2364823 2365494 . + 0 ID=cds-WP_038271916.1;Parent=gene-LPH41_RS10045;Dbxref=Genbank:WP_038271916.1;Name=WP_038271916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482765.1;locus_tag=LPH41_RS10045;product=DUF484 family protein;protein_id=WP_038271916.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2365521 2366405 . + . ID=gene-LPH41_RS10050;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LPH41_RS10050;old_locus_tag=LPH41_10050 NZ_CP087680.1 Protein Homology CDS 2365521 2366405 . + 0 ID=cds-WP_038271918.1;Parent=gene-LPH41_RS10050;Dbxref=Genbank:WP_038271918.1;Name=WP_038271918.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089050.1;locus_tag=LPH41_RS10050;product=tyrosine recombinase XerC;protein_id=WP_038271918.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2366872 2367381 . - . ID=gene-LPH41_RS10055;Name=LPH41_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10055;old_locus_tag=LPH41_10055 NZ_CP087680.1 GeneMarkS-2+ CDS 2366872 2367381 . - 0 ID=cds-WP_038271920.1;Parent=gene-LPH41_RS10055;Dbxref=Genbank:WP_038271920.1;Name=WP_038271920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10055;product=hypothetical protein;protein_id=WP_038271920.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2368773 2369324 . + . ID=gene-LPH41_RS10060;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LPH41_RS10060;old_locus_tag=LPH41_10060 NZ_CP087680.1 Protein Homology CDS 2368773 2369324 . + 0 ID=cds-WP_038271923.1;Parent=gene-LPH41_RS10060;Dbxref=Genbank:WP_038271923.1;Name=WP_038271923.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260360.1;locus_tag=LPH41_RS10060;product=ATP-dependent protease subunit HslV;protein_id=WP_038271923.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2369391 2370764 . + . ID=gene-LPH41_RS10065;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LPH41_RS10065;old_locus_tag=LPH41_10065 NZ_CP087680.1 Protein Homology CDS 2369391 2370764 . + 0 ID=cds-WP_038271925.1;Parent=gene-LPH41_RS10065;Dbxref=Genbank:WP_038271925.1;Name=WP_038271925.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850946.1;locus_tag=LPH41_RS10065;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_038271925.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2370959 2372314 . - . ID=gene-LPH41_RS10070;Name=LPH41_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10070;old_locus_tag=LPH41_10070 NZ_CP087680.1 Protein Homology CDS 2370959 2372314 . - 0 ID=cds-WP_038271981.1;Parent=gene-LPH41_RS10070;Dbxref=Genbank:WP_038271981.1;Name=WP_038271981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893987.1;locus_tag=LPH41_RS10070;product=DUF2252 family protein;protein_id=WP_038271981.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2372730 2373491 . + . ID=gene-LPH41_RS10075;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LPH41_RS10075;old_locus_tag=LPH41_10075 NZ_CP087680.1 Protein Homology CDS 2372730 2373491 . + 0 ID=cds-WP_038271927.1;Parent=gene-LPH41_RS10075;Dbxref=Genbank:WP_038271927.1;Name=WP_038271927.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852163.1;locus_tag=LPH41_RS10075;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_038271927.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2373839 2375728 . + . ID=gene-LPH41_RS10080;Name=LPH41_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10080;old_locus_tag=LPH41_10080 NZ_CP087680.1 Protein Homology CDS 2373839 2375728 . + 0 ID=cds-WP_038271983.1;Parent=gene-LPH41_RS10080;Dbxref=Genbank:WP_038271983.1;Name=WP_038271983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852162.1;locus_tag=LPH41_RS10080;product=M1 family metallopeptidase;protein_id=WP_038271983.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2376385 2376999 . + . ID=gene-LPH41_RS10085;Name=LPH41_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10085;old_locus_tag=LPH41_10085 NZ_CP087680.1 Protein Homology CDS 2376385 2376999 . + 0 ID=cds-WP_051482357.1;Parent=gene-LPH41_RS10085;Dbxref=Genbank:WP_051482357.1;Name=WP_051482357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852161.1;locus_tag=LPH41_RS10085;product=thioredoxin family protein;protein_id=WP_051482357.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2377288 2377767 . - . ID=gene-LPH41_RS10090;Name=LPH41_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10090;old_locus_tag=LPH41_10090 NZ_CP087680.1 Protein Homology CDS 2377288 2377767 . - 0 ID=cds-WP_038271933.1;Parent=gene-LPH41_RS10090;Dbxref=Genbank:WP_038271933.1;Name=WP_038271933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852160.1;locus_tag=LPH41_RS10090;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_038271933.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2378616 2378838 . + . ID=gene-LPH41_RS10095;Name=LPH41_RS10095;end_range=2378838,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS10095;old_locus_tag=LPH41_10095;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 2378616 2378838 . + 0 ID=cds-LPH41_RS10095;Parent=gene-LPH41_RS10095;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2378838,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LPH41_RS10095;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2379613 2379759 . + . ID=gene-LPH41_RS10100;Name=LPH41_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10100;old_locus_tag=LPH41_10100 NZ_CP087680.1 GeneMarkS-2+ CDS 2379613 2379759 . + 0 ID=cds-WP_160165201.1;Parent=gene-LPH41_RS10100;Dbxref=Genbank:WP_160165201.1;Name=WP_160165201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10100;product=hypothetical protein;protein_id=WP_160165201.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2382274 2382690 . + . ID=gene-LPH41_RS10105;Name=LPH41_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10105;old_locus_tag=LPH41_10105 NZ_CP087680.1 Protein Homology CDS 2382274 2382690 . + 0 ID=cds-WP_038271936.1;Parent=gene-LPH41_RS10105;Dbxref=Genbank:WP_038271936.1;Name=WP_038271936.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083709.1;locus_tag=LPH41_RS10105;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_038271936.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2384140 2384985 . - . ID=gene-LPH41_RS10110;Name=LPH41_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10110;old_locus_tag=LPH41_10110 NZ_CP087680.1 Protein Homology CDS 2384140 2384985 . - 0 ID=cds-WP_051482355.1;Parent=gene-LPH41_RS10110;Dbxref=Genbank:WP_051482355.1;Name=WP_051482355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851900.1;locus_tag=LPH41_RS10110;product=SirB1 family protein;protein_id=WP_051482355.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2385074 2385520 . - . ID=gene-LPH41_RS10115;Name=LPH41_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10115;old_locus_tag=LPH41_10115 NZ_CP087680.1 Protein Homology CDS 2385074 2385520 . - 0 ID=cds-WP_038271986.1;Parent=gene-LPH41_RS10115;Dbxref=Genbank:WP_038271986.1;Name=WP_038271986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893996.1;locus_tag=LPH41_RS10115;product=DUF192 domain-containing protein;protein_id=WP_038271986.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2386265 2386402 . - . ID=gene-LPH41_RS10120;Name=LPH41_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10120;old_locus_tag=LPH41_10120 NZ_CP087680.1 GeneMarkS-2+ CDS 2386265 2386402 . - 0 ID=cds-WP_160165203.1;Parent=gene-LPH41_RS10120;Dbxref=Genbank:WP_160165203.1;Name=WP_160165203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10120;product=hypothetical protein;protein_id=WP_160165203.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2386442 2388493 . + . ID=gene-LPH41_RS10125;Name=LPH41_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10125;old_locus_tag=LPH41_10125 NZ_CP087680.1 Protein Homology CDS 2386442 2388493 . + 0 ID=cds-WP_038271941.1;Parent=gene-LPH41_RS10125;Dbxref=Genbank:WP_038271941.1;Name=WP_038271941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083706.1;locus_tag=LPH41_RS10125;product=TonB-dependent receptor;protein_id=WP_038271941.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2389263 2389466 . + . ID=gene-LPH41_RS10130;Name=LPH41_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10130;old_locus_tag=LPH41_10130 NZ_CP087680.1 GeneMarkS-2+ CDS 2389263 2389466 . + 0 ID=cds-WP_162814103.1;Parent=gene-LPH41_RS10130;Dbxref=Genbank:WP_162814103.1;Name=WP_162814103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10130;product=hypothetical protein;protein_id=WP_162814103.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2389705 2390436 . - . ID=gene-LPH41_RS10135;Name=LPH41_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10135;old_locus_tag=LPH41_10135 NZ_CP087680.1 Protein Homology CDS 2389705 2390436 . - 0 ID=cds-WP_038271943.1;Parent=gene-LPH41_RS10135;Dbxref=Genbank:WP_038271943.1;Name=WP_038271943.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038282.1;locus_tag=LPH41_RS10135;product=phosphoadenylyl-sulfate reductase;protein_id=WP_038271943.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2390433 2392139 . - . ID=gene-LPH41_RS10140;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=LPH41_RS10140;old_locus_tag=LPH41_10140 NZ_CP087680.1 Protein Homology CDS 2390433 2392139 . - 0 ID=cds-WP_038271945.1;Parent=gene-LPH41_RS10140;Dbxref=Genbank:WP_038271945.1;Name=WP_038271945.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089014.1;locus_tag=LPH41_RS10140;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_038271945.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2392263 2394101 . - . ID=gene-LPH41_RS10145;Name=LPH41_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10145;old_locus_tag=LPH41_10145 NZ_CP087680.1 Protein Homology CDS 2392263 2394101 . - 0 ID=cds-WP_038271947.1;Parent=gene-LPH41_RS10145;Dbxref=Genbank:WP_038271947.1;Name=WP_038271947.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504375.1;locus_tag=LPH41_RS10145;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_038271947.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2394308 2395216 . + . ID=gene-LPH41_RS10150;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LPH41_RS10150;old_locus_tag=LPH41_10150 NZ_CP087680.1 Protein Homology CDS 2394308 2395216 . + 0 ID=cds-WP_038271949.1;Parent=gene-LPH41_RS10150;Dbxref=Genbank:WP_038271949.1;Name=WP_038271949.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370926.1;locus_tag=LPH41_RS10150;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_038271949.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2395216 2397195 . + . ID=gene-LPH41_RS10155;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LPH41_RS10155;old_locus_tag=LPH41_10155 NZ_CP087680.1 Protein Homology CDS 2395216 2397195 . + 0 ID=cds-WP_038271950.1;Parent=gene-LPH41_RS10155;Dbxref=Genbank:WP_038271950.1;Name=WP_038271950.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894002.1;locus_tag=LPH41_RS10155;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_038271950.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2398515 2398814 . - . ID=gene-LPH41_RS10160;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LPH41_RS10160;old_locus_tag=LPH41_10160 NZ_CP087680.1 Protein Homology CDS 2398515 2398814 . - 0 ID=cds-WP_038271953.1;Parent=gene-LPH41_RS10160;Dbxref=Genbank:WP_038271953.1;Name=WP_038271953.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812428.1;locus_tag=LPH41_RS10160;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_038271953.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2399037 2399651 . - . ID=gene-LPH41_RS10165;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LPH41_RS10165;old_locus_tag=LPH41_10165 NZ_CP087680.1 Protein Homology CDS 2399037 2399651 . - 0 ID=cds-WP_038271956.1;Parent=gene-LPH41_RS10165;Dbxref=Genbank:WP_038271956.1;Name=WP_038271956.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534224.1;locus_tag=LPH41_RS10165;product=guanylate kinase;protein_id=WP_038271956.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2399751 2400611 . - . ID=gene-LPH41_RS10170;Name=LPH41_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10170;old_locus_tag=LPH41_10170 NZ_CP087680.1 Protein Homology CDS 2399751 2400611 . - 0 ID=cds-WP_038271959.1;Parent=gene-LPH41_RS10170;Dbxref=Genbank:WP_038271959.1;Name=WP_038271959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996763.1;locus_tag=LPH41_RS10170;product=YicC family protein;protein_id=WP_038271959.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2400721 2401446 . + . ID=gene-LPH41_RS10175;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LPH41_RS10175;old_locus_tag=LPH41_10175 NZ_CP087680.1 Protein Homology CDS 2400721 2401446 . + 0 ID=cds-WP_038271963.1;Parent=gene-LPH41_RS10175;Dbxref=Genbank:WP_038271963.1;Name=WP_038271963.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083697.1;locus_tag=LPH41_RS10175;product=ribonuclease PH;protein_id=WP_038271963.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2401545 2402144 . + . ID=gene-LPH41_RS10180;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LPH41_RS10180;old_locus_tag=LPH41_10180 NZ_CP087680.1 Protein Homology CDS 2401545 2402144 . + 0 ID=cds-WP_038271988.1;Parent=gene-LPH41_RS10180;Dbxref=Genbank:WP_038271988.1;Name=WP_038271988.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097758.1;locus_tag=LPH41_RS10180;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_038271988.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2402359 2403513 . + . ID=gene-LPH41_RS10185;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LPH41_RS10185;old_locus_tag=LPH41_10185 NZ_CP087680.1 Protein Homology CDS 2402359 2403513 . + 0 ID=cds-WP_038271990.1;Parent=gene-LPH41_RS10185;Dbxref=Genbank:WP_038271990.1;Name=WP_038271990.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156861.1;locus_tag=LPH41_RS10185;product=radical SAM family heme chaperone HemW;protein_id=WP_038271990.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2403588 2406059 . + . ID=gene-LPH41_RS10190;Name=LPH41_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10190;old_locus_tag=LPH41_10190 NZ_CP087680.1 Protein Homology CDS 2403588 2406059 . + 0 ID=cds-WP_038271966.1;Parent=gene-LPH41_RS10190;Dbxref=Genbank:WP_038271966.1;Name=WP_038271966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088987.1;locus_tag=LPH41_RS10190;product=DUF1631 domain-containing protein;protein_id=WP_038271966.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2406056 2406394 . + . ID=gene-LPH41_RS10195;Name=LPH41_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10195;old_locus_tag=LPH41_10195 NZ_CP087680.1 Protein Homology CDS 2406056 2406394 . + 0 ID=cds-WP_038271968.1;Parent=gene-LPH41_RS10195;Dbxref=Genbank:WP_038271968.1;Name=WP_038271968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083693.1;locus_tag=LPH41_RS10195;product=PilZ domain-containing protein;protein_id=WP_038271968.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2406475 2407416 . - . ID=gene-LPH41_RS10200;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LPH41_RS10200;old_locus_tag=LPH41_10200 NZ_CP087680.1 Protein Homology CDS 2406475 2407416 . - 0 ID=cds-WP_038271970.1;Parent=gene-LPH41_RS10200;Dbxref=Genbank:WP_038271970.1;Name=WP_038271970.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852150.1;locus_tag=LPH41_RS10200;product=prolyl aminopeptidase;protein_id=WP_038271970.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2407451 2407789 . - . ID=gene-LPH41_RS10205;Name=LPH41_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10205;old_locus_tag=LPH41_10205 NZ_CP087680.1 Protein Homology CDS 2407451 2407789 . - 0 ID=cds-WP_038271972.1;Parent=gene-LPH41_RS10205;Dbxref=Genbank:WP_038271972.1;Name=WP_038271972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465222.1;locus_tag=LPH41_RS10205;product=DUF5713 family protein;protein_id=WP_038271972.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2407892 2408719 . - . ID=gene-LPH41_RS10210;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LPH41_RS10210;old_locus_tag=LPH41_10210 NZ_CP087680.1 Protein Homology CDS 2407892 2408719 . - 0 ID=cds-WP_038273117.1;Parent=gene-LPH41_RS10210;Dbxref=Genbank:WP_038273117.1;Name=WP_038273117.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894013.1;locus_tag=LPH41_RS10210;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_038273117.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2409288 2410187 . + . ID=gene-LPH41_RS10215;Name=LPH41_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10215;old_locus_tag=LPH41_10215 NZ_CP087680.1 Protein Homology CDS 2409288 2410187 . + 0 ID=cds-WP_230428227.1;Parent=gene-LPH41_RS10215;Dbxref=Genbank:WP_230428227.1;Name=WP_230428227.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014698.2;locus_tag=LPH41_RS10215;product=TauD/TfdA family dioxygenase;protein_id=WP_230428227.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2410205 2411116 . + . ID=gene-LPH41_RS10220;Name=LPH41_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10220;old_locus_tag=LPH41_10220 NZ_CP087680.1 Protein Homology CDS 2410205 2411116 . + 0 ID=cds-WP_038273112.1;Parent=gene-LPH41_RS10220;Dbxref=Genbank:WP_038273112.1;Name=WP_038273112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088966.1;locus_tag=LPH41_RS10220;product=AEC family transporter;protein_id=WP_038273112.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2411999 2416684 . + . ID=gene-LPH41_RS10225;Name=LPH41_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10225;old_locus_tag=LPH41_10225 NZ_CP087680.1 Protein Homology CDS 2411999 2416684 . + 0 ID=cds-WP_230439282.1;Parent=gene-LPH41_RS10225;Dbxref=Genbank:WP_230439282.1;Name=WP_230439282.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.2;locus_tag=LPH41_RS10225;product=YadA-like family protein;protein_id=WP_230439282.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2417019 2418734 . + . ID=gene-LPH41_RS10230;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LPH41_RS10230;old_locus_tag=LPH41_10230 NZ_CP087680.1 Protein Homology CDS 2417019 2418734 . + 0 ID=cds-WP_038272901.1;Parent=gene-LPH41_RS10230;Dbxref=Genbank:WP_038272901.1;Name=WP_038272901.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343590.1;locus_tag=LPH41_RS10230;product=type II secretion system ATPase GspE;protein_id=WP_038272901.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2418770 2419987 . + . ID=gene-LPH41_RS10235;Name=LPH41_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10235;old_locus_tag=LPH41_10235 NZ_CP087680.1 Protein Homology CDS 2418770 2419987 . + 0 ID=cds-WP_038272902.1;Parent=gene-LPH41_RS10235;Dbxref=Genbank:WP_038272902.1;Name=WP_038272902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504592.1;locus_tag=LPH41_RS10235;product=type II secretion system F family protein;protein_id=WP_038272902.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2420152 2420586 . + . ID=gene-LPH41_RS10240;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LPH41_RS10240;old_locus_tag=LPH41_10240 NZ_CP087680.1 Protein Homology CDS 2420152 2420586 . + 0 ID=cds-WP_038272904.1;Parent=gene-LPH41_RS10240;Dbxref=Genbank:WP_038272904.1;Name=WP_038272904.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088955.1;locus_tag=LPH41_RS10240;product=type II secretion system major pseudopilin GspG;protein_id=WP_038272904.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2420643 2421098 . + . ID=gene-LPH41_RS10245;Name=LPH41_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10245;old_locus_tag=LPH41_10245 NZ_CP087680.1 Protein Homology CDS 2420643 2421098 . + 0 ID=cds-WP_114867164.1;Parent=gene-LPH41_RS10245;Dbxref=Genbank:WP_114867164.1;Name=WP_114867164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894021.1;locus_tag=LPH41_RS10245;product=type II secretion system protein GspH;protein_id=WP_114867164.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2421095 2421493 . + . ID=gene-LPH41_RS10250;Name=LPH41_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10250;old_locus_tag=LPH41_10250 NZ_CP087680.1 Protein Homology CDS 2421095 2421493 . + 0 ID=cds-WP_038272909.1;Parent=gene-LPH41_RS10250;Dbxref=Genbank:WP_038272909.1;Name=WP_038272909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158146.1;locus_tag=LPH41_RS10250;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_038272909.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2421490 2422116 . + . ID=gene-LPH41_RS10255;Name=LPH41_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10255;old_locus_tag=LPH41_10255 NZ_CP087680.1 Protein Homology CDS 2421490 2422116 . + 0 ID=cds-WP_038272911.1;Parent=gene-LPH41_RS10255;Dbxref=Genbank:WP_038272911.1;Name=WP_038272911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852924.1;locus_tag=LPH41_RS10255;product=type II secretion system protein J;protein_id=WP_038272911.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2422116 2422961 . + . ID=gene-LPH41_RS10260;Name=LPH41_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10260;old_locus_tag=LPH41_10260 NZ_CP087680.1 Protein Homology CDS 2422116 2422961 . + 0 ID=cds-WP_038272913.1;Parent=gene-LPH41_RS10260;Dbxref=Genbank:WP_038272913.1;Name=WP_038272913.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158144.1;locus_tag=LPH41_RS10260;product=type II secretion system protein GspK;protein_id=WP_038272913.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2422994 2423137 . + . ID=gene-LPH41_RS10265;Name=LPH41_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10265;old_locus_tag=LPH41_10265 NZ_CP087680.1 GeneMarkS-2+ CDS 2422994 2423137 . + 0 ID=cds-WP_230428226.1;Parent=gene-LPH41_RS10265;Dbxref=Genbank:WP_230428226.1;Name=WP_230428226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10265;product=hypothetical protein;protein_id=WP_230428226.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2423383 2423673 . + . ID=gene-LPH41_RS10270;Name=LPH41_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10270;old_locus_tag=LPH41_10270 NZ_CP087680.1 GeneMarkS-2+ CDS 2423383 2423673 . + 0 ID=cds-WP_114867163.1;Parent=gene-LPH41_RS10270;Dbxref=Genbank:WP_114867163.1;Name=WP_114867163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10270;product=general secretion pathway protein GspK;protein_id=WP_114867163.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2423670 2424797 . + . ID=gene-LPH41_RS10275;Name=LPH41_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10275;old_locus_tag=LPH41_10275 NZ_CP087680.1 Protein Homology CDS 2423670 2424797 . + 0 ID=cds-WP_038272917.1;Parent=gene-LPH41_RS10275;Dbxref=Genbank:WP_038272917.1;Name=WP_038272917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035907.1;locus_tag=LPH41_RS10275;product=PilN domain-containing protein;protein_id=WP_038272917.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2424778 2425410 . + . ID=gene-LPH41_RS10280;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LPH41_RS10280;old_locus_tag=LPH41_10280 NZ_CP087680.1 Protein Homology CDS 2424778 2425410 . + 0 ID=cds-WP_038272918.1;Parent=gene-LPH41_RS10280;Dbxref=Genbank:WP_038272918.1;Name=WP_038272918.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083680.1;locus_tag=LPH41_RS10280;product=type II secretion system protein GspM;protein_id=WP_038272918.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2425400 2426215 . + . ID=gene-LPH41_RS10285;Name=LPH41_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10285;old_locus_tag=LPH41_10285 NZ_CP087680.1 Protein Homology CDS 2425400 2426215 . + 0 ID=cds-WP_038272921.1;Parent=gene-LPH41_RS10285;Dbxref=Genbank:WP_038272921.1;Name=WP_038272921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851909.1;locus_tag=LPH41_RS10285;product=hypothetical protein;protein_id=WP_038272921.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2426257 2428551 . + . ID=gene-LPH41_RS10290;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LPH41_RS10290;old_locus_tag=LPH41_10290 NZ_CP087680.1 Protein Homology CDS 2426257 2428551 . + 0 ID=cds-WP_038272922.1;Parent=gene-LPH41_RS10290;Dbxref=Genbank:WP_038272922.1;Name=WP_038272922.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851910.1;locus_tag=LPH41_RS10290;product=type II secretion system secretin GspD;protein_id=WP_038272922.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2429343 2435891 . + . ID=gene-LPH41_RS10295;Name=LPH41_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10295;old_locus_tag=LPH41_10295 NZ_CP087680.1 Protein Homology CDS 2429343 2435891 . + 0 ID=cds-WP_230439337.1;Parent=gene-LPH41_RS10295;Dbxref=Genbank:WP_230439337.1;Name=WP_230439337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097768.1;locus_tag=LPH41_RS10295;product=YadA-like family protein;protein_id=WP_230439337.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2436354 2436914 . + . ID=gene-LPH41_RS10300;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LPH41_RS10300;old_locus_tag=LPH41_10300 NZ_CP087680.1 Protein Homology CDS 2436354 2436914 . + 0 ID=cds-WP_038272620.1;Parent=gene-LPH41_RS10300;Dbxref=Genbank:WP_038272620.1;Name=WP_038272620.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=LPH41_RS10300;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_038272620.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2437102 2438691 . + . ID=gene-LPH41_RS10305;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LPH41_RS10305;old_locus_tag=LPH41_10305 NZ_CP087680.1 Protein Homology CDS 2437102 2438691 . + 0 ID=cds-WP_038272622.1;Parent=gene-LPH41_RS10305;Dbxref=Genbank:WP_038272622.1;Name=WP_038272622.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488827.1;locus_tag=LPH41_RS10305;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_038272622.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2438796 2439731 . + . ID=gene-LPH41_RS10310;Name=LPH41_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10310;old_locus_tag=LPH41_10310 NZ_CP087680.1 Protein Homology CDS 2438796 2439731 . + 0 ID=cds-WP_038272625.1;Parent=gene-LPH41_RS10310;Dbxref=Genbank:WP_038272625.1;Name=WP_038272625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083674.1;locus_tag=LPH41_RS10310;product=LysR substrate-binding domain-containing protein;protein_id=WP_038272625.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2440010 2440711 . + . ID=gene-LPH41_RS10315;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LPH41_RS10315;old_locus_tag=LPH41_10315 NZ_CP087680.1 Protein Homology CDS 2440010 2440711 . + 0 ID=cds-WP_038272628.1;Parent=gene-LPH41_RS10315;Dbxref=Genbank:WP_038272628.1;Name=WP_038272628.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375169.1;locus_tag=LPH41_RS10315;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_038272628.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2441412 2441654 . + . ID=gene-LPH41_RS10320;Name=LPH41_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10320;old_locus_tag=LPH41_10320 NZ_CP087680.1 Protein Homology CDS 2441412 2441654 . + 0 ID=cds-WP_038272630.1;Parent=gene-LPH41_RS10320;Dbxref=Genbank:WP_038272630.1;Name=WP_038272630.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087863.1;locus_tag=LPH41_RS10320;product=type B 50S ribosomal protein L31;protein_id=WP_038272630.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2441881 2443200 . + . ID=gene-LPH41_RS10325;Name=LPH41_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10325;old_locus_tag=LPH41_10325 NZ_CP087680.1 Protein Homology CDS 2441881 2443200 . + 0 ID=cds-WP_038272633.1;Parent=gene-LPH41_RS10325;Dbxref=Genbank:WP_038272633.1;Name=WP_038272633.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156870.1;locus_tag=LPH41_RS10325;product=citrate synthase;protein_id=WP_038272633.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2443324 2443716 . - . ID=gene-LPH41_RS10330;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LPH41_RS10330;old_locus_tag=LPH41_10330 NZ_CP087680.1 Protein Homology CDS 2443324 2443716 . - 0 ID=cds-WP_038272635.1;Parent=gene-LPH41_RS10330;Dbxref=Genbank:WP_038272635.1;Name=WP_038272635.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083670.1;locus_tag=LPH41_RS10330;product=30S ribosomal protein S9;protein_id=WP_038272635.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2443720 2444148 . - . ID=gene-LPH41_RS10335;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LPH41_RS10335;old_locus_tag=LPH41_10335 NZ_CP087680.1 Protein Homology CDS 2443720 2444148 . - 0 ID=cds-WP_038272637.1;Parent=gene-LPH41_RS10335;Dbxref=Genbank:WP_038272637.1;Name=WP_038272637.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451009.1;locus_tag=LPH41_RS10335;product=50S ribosomal protein L13;protein_id=WP_038272637.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2444317 2444970 . + . ID=gene-LPH41_RS10340;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LPH41_RS10340;old_locus_tag=LPH41_10340 NZ_CP087680.1 Protein Homology CDS 2444317 2444970 . + 0 ID=cds-WP_038272659.1;Parent=gene-LPH41_RS10340;Dbxref=Genbank:WP_038272659.1;Name=WP_038272659.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097769.1;locus_tag=LPH41_RS10340;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_038272659.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2445224 2446018 . - . ID=gene-LPH41_RS10345;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LPH41_RS10345;old_locus_tag=LPH41_10345 NZ_CP087680.1 Protein Homology CDS 2445224 2446018 . - 0 ID=cds-WP_038272638.1;Parent=gene-LPH41_RS10345;Dbxref=Genbank:WP_038272638.1;Name=WP_038272638.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411315.1;locus_tag=LPH41_RS10345;product=adenosylmethionine decarboxylase;protein_id=WP_038272638.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2446160 2446849 . + . ID=gene-LPH41_RS10350;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=LPH41_RS10350;old_locus_tag=LPH41_10350 NZ_CP087680.1 Protein Homology CDS 2446160 2446849 . + 0 ID=cds-WP_038272640.1;Parent=gene-LPH41_RS10350;Dbxref=Genbank:WP_038272640.1;Name=WP_038272640.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368067.1;locus_tag=LPH41_RS10350;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_038272640.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2447804 2447980 . + . ID=gene-LPH41_RS10355;Name=LPH41_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10355;old_locus_tag=LPH41_10355 NZ_CP087680.1 Protein Homology CDS 2447804 2447980 . + 0 ID=cds-WP_230428225.1;Parent=gene-LPH41_RS10355;Dbxref=Genbank:WP_230428225.1;Name=WP_230428225.1;Ontology_term=GO:0042742;gbkey=CDS;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607699.1;locus_tag=LPH41_RS10355;product=Blp family class II bacteriocin;protein_id=WP_230428225.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2448025 2448213 . + . ID=gene-LPH41_RS10360;Name=LPH41_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10360;old_locus_tag=LPH41_10360 NZ_CP087680.1 GeneMarkS-2+ CDS 2448025 2448213 . + 0 ID=cds-WP_038272642.1;Parent=gene-LPH41_RS10360;Dbxref=Genbank:WP_038272642.1;Name=WP_038272642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10360;product=hypothetical protein;protein_id=WP_038272642.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2449324 2450124 . - . ID=gene-LPH41_RS10365;Name=LPH41_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10365;old_locus_tag=LPH41_10365 NZ_CP087680.1 Protein Homology CDS 2449324 2450124 . - 0 ID=cds-WP_038272649.1;Parent=gene-LPH41_RS10365;Dbxref=Genbank:WP_038272649.1;Name=WP_038272649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451918.1;locus_tag=LPH41_RS10365;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_038272649.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2451471 2451932 . + . ID=gene-LPH41_RS10370;Name=LPH41_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10370;old_locus_tag=LPH41_10370 NZ_CP087680.1 Protein Homology CDS 2451471 2451932 . + 0 ID=cds-WP_038272652.1;Parent=gene-LPH41_RS10370;Dbxref=Genbank:WP_038272652.1;Name=WP_038272652.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303254.1;locus_tag=LPH41_RS10370;product=glycine zipper 2TM domain-containing protein;protein_id=WP_038272652.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2454042 2455478 . - . ID=gene-LPH41_RS10375;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LPH41_RS10375;old_locus_tag=LPH41_10375 NZ_CP087680.1 Protein Homology CDS 2454042 2455478 . - 0 ID=cds-WP_038272654.1;Parent=gene-LPH41_RS10375;Dbxref=Genbank:WP_038272654.1;Name=WP_038272654.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159046.1;locus_tag=LPH41_RS10375;product=dihydrolipoyl dehydrogenase;protein_id=WP_038272654.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2455726 2455896 . - . ID=gene-LPH41_RS10380;Name=LPH41_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10380;old_locus_tag=LPH41_10380 NZ_CP087680.1 GeneMarkS-2+ CDS 2455726 2455896 . - 0 ID=cds-WP_230428505.1;Parent=gene-LPH41_RS10380;Dbxref=Genbank:WP_230428505.1;Name=WP_230428505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10380;product=hypothetical protein;protein_id=WP_230428505.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2455912 2457075 . - . ID=gene-LPH41_RS10385;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=LPH41_RS10385;old_locus_tag=LPH41_10385 NZ_CP087680.1 Protein Homology CDS 2455912 2457075 . - 0 ID=cds-WP_038272655.1;Parent=gene-LPH41_RS10385;Dbxref=Genbank:WP_038272655.1;Name=WP_038272655.1;Ontology_term=GO:0006099,GO:0006554,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572000.1;locus_tag=LPH41_RS10385;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_038272655.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2457116 2459944 . - . ID=gene-LPH41_RS10390;Name=LPH41_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10390;old_locus_tag=LPH41_10390 NZ_CP087680.1 Protein Homology CDS 2457116 2459944 . - 0 ID=cds-WP_114867160.1;Parent=gene-LPH41_RS10390;Dbxref=Genbank:WP_114867160.1;Name=WP_114867160.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507330.1;locus_tag=LPH41_RS10390;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_114867160.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2461580 2462842 . - . ID=gene-LPH41_RS10395;Name=LPH41_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10395;old_locus_tag=LPH41_10395 NZ_CP087680.1 Protein Homology CDS 2461580 2462842 . - 0 ID=cds-WP_038272522.1;Parent=gene-LPH41_RS10395;Dbxref=Genbank:WP_038272522.1;Name=WP_038272522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337786.1;locus_tag=LPH41_RS10395;product=cupin domain-containing protein;protein_id=WP_038272522.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2463396 2464763 . - . ID=gene-LPH41_RS10400;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LPH41_RS10400;old_locus_tag=LPH41_10400 NZ_CP087680.1 Protein Homology CDS 2463396 2464763 . - 0 ID=cds-WP_038272523.1;Parent=gene-LPH41_RS10400;Dbxref=Genbank:WP_038272523.1;Name=WP_038272523.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156796.1;locus_tag=LPH41_RS10400;product=adenylosuccinate lyase;protein_id=WP_038272523.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2465238 2466644 . + . ID=gene-LPH41_RS10405;Name=LPH41_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10405;old_locus_tag=LPH41_10405 NZ_CP087680.1 Protein Homology CDS 2465238 2466644 . + 0 ID=cds-WP_038272527.1;Parent=gene-LPH41_RS10405;Dbxref=Genbank:WP_038272527.1;Name=WP_038272527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852308.1;locus_tag=LPH41_RS10405;product=class II fumarate hydratase;protein_id=WP_038272527.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2466850 2467278 . - . ID=gene-LPH41_RS10410;Name=LPH41_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10410;old_locus_tag=LPH41_10410 NZ_CP087680.1 Protein Homology CDS 2466850 2467278 . - 0 ID=cds-WP_038272529.1;Parent=gene-LPH41_RS10410;Dbxref=Genbank:WP_038272529.1;Name=WP_038272529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852919.1;locus_tag=LPH41_RS10410;product=hypothetical protein;protein_id=WP_038272529.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2468063 2468191 . + . ID=gene-LPH41_RS12055;Name=LPH41_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12055 NZ_CP087680.1 GeneMarkS-2+ CDS 2468063 2468191 . + 0 ID=cds-WP_268746653.1;Parent=gene-LPH41_RS12055;Dbxref=Genbank:WP_268746653.1;Name=WP_268746653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12055;product=hypothetical protein;protein_id=WP_268746653.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2468379 2469347 . - . ID=gene-LPH41_RS10415;Name=LPH41_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10415;old_locus_tag=LPH41_10415 NZ_CP087680.1 Protein Homology CDS 2468379 2469347 . - 0 ID=cds-WP_038272533.1;Parent=gene-LPH41_RS10415;Dbxref=Genbank:WP_038272533.1;Name=WP_038272533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894098.1;locus_tag=LPH41_RS10415;product=hypothetical protein;protein_id=WP_038272533.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2469344 2470219 . - . ID=gene-LPH41_RS10420;Name=LPH41_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10420;old_locus_tag=LPH41_10420 NZ_CP087680.1 Protein Homology CDS 2469344 2470219 . - 0 ID=cds-WP_038272536.1;Parent=gene-LPH41_RS10420;Dbxref=Genbank:WP_038272536.1;Name=WP_038272536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913764.1;locus_tag=LPH41_RS10420;product=ABC transporter ATP-binding protein;protein_id=WP_038272536.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2470216 2470392 . - . ID=gene-LPH41_RS10425;Name=LPH41_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10425;old_locus_tag=LPH41_10425 NZ_CP087680.1 GeneMarkS-2+ CDS 2470216 2470392 . - 0 ID=cds-WP_160165218.1;Parent=gene-LPH41_RS10425;Dbxref=Genbank:WP_160165218.1;Name=WP_160165218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10425;product=hypothetical protein;protein_id=WP_160165218.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2470970 2471542 . + . ID=gene-LPH41_RS10430;Name=LPH41_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10430;old_locus_tag=LPH41_10430 NZ_CP087680.1 Protein Homology CDS 2470970 2471542 . + 0 ID=cds-WP_038272538.1;Parent=gene-LPH41_RS10430;Dbxref=Genbank:WP_038272538.1;Name=WP_038272538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097981.1;locus_tag=LPH41_RS10430;product=glutathione peroxidase;protein_id=WP_038272538.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2472389 2473345 . + . ID=gene-LPH41_RS10435;Name=LPH41_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10435;old_locus_tag=LPH41_10435 NZ_CP087680.1 Protein Homology CDS 2472389 2473345 . + 0 ID=cds-WP_038272539.1;Parent=gene-LPH41_RS10435;Dbxref=Genbank:WP_038272539.1;Name=WP_038272539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463036.1;locus_tag=LPH41_RS10435;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_038272539.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2473369 2474721 . + . ID=gene-LPH41_RS10440;Name=LPH41_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10440;old_locus_tag=LPH41_10440 NZ_CP087680.1 Protein Homology CDS 2473369 2474721 . + 0 ID=cds-WP_038272542.1;Parent=gene-LPH41_RS10440;Dbxref=Genbank:WP_038272542.1;Name=WP_038272542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804407.1;locus_tag=LPH41_RS10440;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_038272542.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2474714 2474950 . + . ID=gene-LPH41_RS10445;Name=LPH41_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10445;old_locus_tag=LPH41_10445 NZ_CP087680.1 Protein Homology CDS 2474714 2474950 . + 0 ID=cds-WP_038272561.1;Parent=gene-LPH41_RS10445;Dbxref=Genbank:WP_038272561.1;Name=WP_038272561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087333.1;locus_tag=LPH41_RS10445;product=SlyX family protein;protein_id=WP_038272561.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2474988 2475623 . + . ID=gene-LPH41_RS10450;Name=LPH41_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10450;old_locus_tag=LPH41_10450 NZ_CP087680.1 Protein Homology CDS 2474988 2475623 . + 0 ID=cds-WP_038272544.1;Parent=gene-LPH41_RS10450;Dbxref=Genbank:WP_038272544.1;Name=WP_038272544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087331.1;locus_tag=LPH41_RS10450;product=DUF2058 domain-containing protein;protein_id=WP_038272544.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2477426 2478706 . + . ID=gene-LPH41_RS10455;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=LPH41_RS10455;old_locus_tag=LPH41_10455 NZ_CP087680.1 Protein Homology CDS 2477426 2478706 . + 0 ID=cds-WP_038272549.1;Parent=gene-LPH41_RS10455;Dbxref=Genbank:WP_038272549.1;Name=WP_038272549.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084976.1;locus_tag=LPH41_RS10455;product=L-fucose:H+ symporter permease;protein_id=WP_038272549.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2478727 2479719 . + . ID=gene-LPH41_RS10460;Name=LPH41_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10460;old_locus_tag=LPH41_10460 NZ_CP087680.1 Protein Homology CDS 2478727 2479719 . + 0 ID=cds-WP_038272551.1;Parent=gene-LPH41_RS10460;Dbxref=Genbank:WP_038272551.1;Name=WP_038272551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084974.1;locus_tag=LPH41_RS10460;product=carbohydrate kinase;protein_id=WP_038272551.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2479716 2480918 . + . ID=gene-LPH41_RS10465;Name=LPH41_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10465;old_locus_tag=LPH41_10465 NZ_CP087680.1 Protein Homology CDS 2479716 2480918 . + 0 ID=cds-WP_038272553.1;Parent=gene-LPH41_RS10465;Dbxref=Genbank:WP_038272553.1;Name=WP_038272553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051002.1;locus_tag=LPH41_RS10465;product=AGE family epimerase/isomerase;protein_id=WP_038272553.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2481625 2482554 . - . ID=gene-LPH41_RS10470;Name=LPH41_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10470;old_locus_tag=LPH41_10470 NZ_CP087680.1 Protein Homology CDS 2481625 2482554 . - 0 ID=cds-WP_038272563.1;Parent=gene-LPH41_RS10470;Dbxref=Genbank:WP_038272563.1;Name=WP_038272563.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851692.1;locus_tag=LPH41_RS10470;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_038272563.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2483943 2484560 . - . ID=gene-LPH41_RS10475;Name=LPH41_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10475;old_locus_tag=LPH41_10475 NZ_CP087680.1 Protein Homology CDS 2483943 2484560 . - 0 ID=cds-WP_038272558.1;Parent=gene-LPH41_RS10475;Dbxref=Genbank:WP_038272558.1;Name=WP_038272558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368710.1;locus_tag=LPH41_RS10475;product=TetR/AcrR family transcriptional regulator;protein_id=WP_038272558.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2485754 2486834 . - . ID=gene-LPH41_RS10480;Name=LPH41_RS10480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS10480;old_locus_tag=LPH41_10480;pseudo=true NZ_CP087680.1 Protein Homology CDS 2485754 2486834 . - 0 ID=cds-LPH41_RS10480;Parent=gene-LPH41_RS10480;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260437.1;locus_tag=LPH41_RS10480;product=acetyl-CoA C-acyltransferase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2486889 2487773 . + . ID=gene-LPH41_RS10485;Name=LPH41_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10485;old_locus_tag=LPH41_10485 NZ_CP087680.1 Protein Homology CDS 2486889 2487773 . + 0 ID=cds-WP_171898086.1;Parent=gene-LPH41_RS10485;Dbxref=Genbank:WP_171898086.1;Name=WP_171898086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992724.1;locus_tag=LPH41_RS10485;product=hypothetical protein;protein_id=WP_171898086.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2488109 2488399 . + . ID=gene-LPH41_RS10490;Name=LPH41_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10490;old_locus_tag=LPH41_10490 NZ_CP087680.1 GeneMarkS-2+ CDS 2488109 2488399 . + 0 ID=cds-WP_114867158.1;Parent=gene-LPH41_RS10490;Dbxref=Genbank:WP_114867158.1;Name=WP_114867158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10490;product=hypothetical protein;protein_id=WP_114867158.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2488537 2489880 . - . ID=gene-LPH41_RS10495;Name=LPH41_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10495;old_locus_tag=LPH41_10495 NZ_CP087680.1 Protein Homology CDS 2488537 2489880 . - 0 ID=cds-WP_038271131.1;Parent=gene-LPH41_RS10495;Dbxref=Genbank:WP_038271131.1;Name=WP_038271131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097976.1;locus_tag=LPH41_RS10495;product=serine hydrolase domain-containing protein;protein_id=WP_038271131.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2490967 2492502 . + . ID=gene-LPH41_RS10500;Name=LPH41_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10500;old_locus_tag=LPH41_10500 NZ_CP087680.1 Protein Homology CDS 2490967 2492502 . + 0 ID=cds-WP_038271132.1;Parent=gene-LPH41_RS10500;Dbxref=Genbank:WP_038271132.1;Name=WP_038271132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091066.1;locus_tag=LPH41_RS10500;product=alpha/beta hydrolase;protein_id=WP_038271132.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2492499 2493245 . + . ID=gene-LPH41_RS10505;Name=LPH41_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10505;old_locus_tag=LPH41_10505 NZ_CP087680.1 Protein Homology CDS 2492499 2493245 . + 0 ID=cds-WP_038271133.1;Parent=gene-LPH41_RS10505;Dbxref=Genbank:WP_038271133.1;Name=WP_038271133.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039041.1;locus_tag=LPH41_RS10505;product=ATP-binding cassette domain-containing protein;protein_id=WP_038271133.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2493242 2494426 . + . ID=gene-LPH41_RS10510;Name=LPH41_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10510;old_locus_tag=LPH41_10510 NZ_CP087680.1 Protein Homology CDS 2493242 2494426 . + 0 ID=cds-WP_038271134.1;Parent=gene-LPH41_RS10510;Dbxref=Genbank:WP_038271134.1;Name=WP_038271134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085873.1;locus_tag=LPH41_RS10510;product=ABC transporter permease;protein_id=WP_038271134.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2494525 2495580 . - . ID=gene-LPH41_RS10515;Name=LPH41_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10515;old_locus_tag=LPH41_10515 NZ_CP087680.1 Protein Homology CDS 2494525 2495580 . - 0 ID=cds-WP_230439283.1;Parent=gene-LPH41_RS10515;Dbxref=Genbank:WP_230439283.1;Name=WP_230439283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085874.1;locus_tag=LPH41_RS10515;product=energy transducer TonB;protein_id=WP_230439283.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2496254 2497339 . + . ID=gene-LPH41_RS10520;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LPH41_RS10520;old_locus_tag=LPH41_10520 NZ_CP087680.1 Protein Homology CDS 2496254 2497339 . + 0 ID=cds-WP_038271211.1;Parent=gene-LPH41_RS10520;Dbxref=Genbank:WP_038271211.1;Name=WP_038271211.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300927.1;locus_tag=LPH41_RS10520;product=phosphoserine transaminase;protein_id=WP_038271211.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2497450 2498544 . + . ID=gene-LPH41_RS10525;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LPH41_RS10525;old_locus_tag=LPH41_10525 NZ_CP087680.1 Protein Homology CDS 2497450 2498544 . + 0 ID=cds-WP_038271212.1;Parent=gene-LPH41_RS10525;Dbxref=Genbank:WP_038271212.1;Name=WP_038271212.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451090.1;locus_tag=LPH41_RS10525;product=prephenate dehydratase;protein_id=WP_038271212.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2498633 2499982 . + . ID=gene-LPH41_RS10530;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LPH41_RS10530;old_locus_tag=LPH41_10530 NZ_CP087680.1 Protein Homology CDS 2498633 2499982 . + 0 ID=cds-WP_038271135.1;Parent=gene-LPH41_RS10530;Dbxref=Genbank:WP_038271135.1;Name=WP_038271135.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091079.1;locus_tag=LPH41_RS10530;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_038271135.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2500760 2501455 . - . ID=gene-LPH41_RS10535;Name=LPH41_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10535;old_locus_tag=LPH41_10535 NZ_CP087680.1 Protein Homology CDS 2500760 2501455 . - 0 ID=cds-WP_038271136.1;Parent=gene-LPH41_RS10535;Dbxref=Genbank:WP_038271136.1;Name=WP_038271136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852004.1;locus_tag=LPH41_RS10535;product=energy transducer TonB;protein_id=WP_038271136.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2501575 2502855 . + . ID=gene-LPH41_RS10540;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LPH41_RS10540;old_locus_tag=LPH41_10540 NZ_CP087680.1 Protein Homology CDS 2501575 2502855 . + 0 ID=cds-WP_038271137.1;Parent=gene-LPH41_RS10540;Dbxref=Genbank:WP_038271137.1;Name=WP_038271137.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083457.1;locus_tag=LPH41_RS10540;product=serine--tRNA ligase;protein_id=WP_038271137.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2503894 2504856 . + . ID=gene-LPH41_RS10545;Name=LPH41_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10545;old_locus_tag=LPH41_10545 NZ_CP087680.1 Protein Homology CDS 2503894 2504856 . + 0 ID=cds-WP_038271138.1;Parent=gene-LPH41_RS10545;Dbxref=Genbank:WP_038271138.1;Name=WP_038271138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083456.1;locus_tag=LPH41_RS10545;product=MBL fold metallo-hydrolase;protein_id=WP_038271138.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2505937 2506179 . + . ID=gene-LPH41_RS10550;Name=LPH41_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10550;old_locus_tag=LPH41_10550 NZ_CP087680.1 GeneMarkS-2+ CDS 2505937 2506179 . + 0 ID=cds-WP_152536608.1;Parent=gene-LPH41_RS10550;Dbxref=Genbank:WP_152536608.1;Name=WP_152536608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10550;product=hypothetical protein;protein_id=WP_152536608.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2506688 2507482 . + . ID=gene-LPH41_RS10555;Name=LPH41_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10555;old_locus_tag=LPH41_10555 NZ_CP087680.1 Protein Homology CDS 2506688 2507482 . + 0 ID=cds-WP_038271140.1;Parent=gene-LPH41_RS10555;Dbxref=Genbank:WP_038271140.1;Name=WP_038271140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088266.1;locus_tag=LPH41_RS10555;product=ParA family protein;protein_id=WP_038271140.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2507482 2508414 . + . ID=gene-LPH41_RS10560;Name=LPH41_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10560;old_locus_tag=LPH41_10560 NZ_CP087680.1 Protein Homology CDS 2507482 2508414 . + 0 ID=cds-WP_038271141.1;Parent=gene-LPH41_RS10560;Dbxref=Genbank:WP_038271141.1;Name=WP_038271141.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088267.1;locus_tag=LPH41_RS10560;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_038271141.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2508787 2509752 . + . ID=gene-LPH41_RS10565;Name=LPH41_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10565;old_locus_tag=LPH41_10565 NZ_CP087680.1 Protein Homology CDS 2508787 2509752 . + 0 ID=cds-WP_038271142.1;Parent=gene-LPH41_RS10565;Dbxref=Genbank:WP_038271142.1;Name=WP_038271142.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115470.1;locus_tag=LPH41_RS10565;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_038271142.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2509833 2510555 . + . ID=gene-LPH41_RS10570;Name=LPH41_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10570;old_locus_tag=LPH41_10570 NZ_CP087680.1 Protein Homology CDS 2509833 2510555 . + 0 ID=cds-WP_038271143.1;Parent=gene-LPH41_RS10570;Dbxref=Genbank:WP_038271143.1;Name=WP_038271143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088269.1;locus_tag=LPH41_RS10570;product=glycosyltransferase;protein_id=WP_038271143.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2510557 2510880 . + . ID=gene-LPH41_RS10575;Name=LPH41_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10575;old_locus_tag=LPH41_10575 NZ_CP087680.1 Protein Homology CDS 2510557 2510880 . + 0 ID=cds-WP_171898085.1;Parent=gene-LPH41_RS10575;Dbxref=Genbank:WP_171898085.1;Name=WP_171898085.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156759.1;locus_tag=LPH41_RS10575;product=lipid-A-disaccharide synthase N-terminal domain-containing protein;protein_id=WP_171898085.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2511856 2513502 . + . ID=gene-LPH41_RS10580;Name=LPH41_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10580;old_locus_tag=LPH41_10580 NZ_CP087680.1 Protein Homology CDS 2511856 2513502 . + 0 ID=cds-WP_038271146.1;Parent=gene-LPH41_RS10580;Dbxref=Genbank:WP_038271146.1;Name=WP_038271146.1;Ontology_term=GO:0006631,GO:0031956;gbkey=CDS;go_function=medium-chain fatty acid-CoA ligase activity|0031956||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852012.1;locus_tag=LPH41_RS10580;product=fatty acid CoA ligase family protein;protein_id=WP_038271146.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2513499 2513715 . - . ID=gene-LPH41_RS10585;Name=LPH41_RS10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS10585;old_locus_tag=LPH41_10585;partial=true;pseudo=true;start_range=.,2513499 NZ_CP087680.1 Protein Homology CDS 2513499 2513715 . - 0 ID=cds-LPH41_RS10585;Parent=gene-LPH41_RS10585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083449.1;locus_tag=LPH41_RS10585;partial=true;product=isochorismatase family protein;pseudo=true;start_range=.,2513499;transl_table=11 NZ_CP087680.1 RefSeq gene 2513737 2514447 . - . ID=gene-LPH41_RS10590;Name=LPH41_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10590;old_locus_tag=LPH41_10590 NZ_CP087680.1 Protein Homology CDS 2513737 2514447 . - 0 ID=cds-WP_051482305.1;Parent=gene-LPH41_RS10590;Dbxref=Genbank:WP_051482305.1;Name=WP_051482305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356868.1;locus_tag=LPH41_RS10590;product=epoxyqueuosine reductase QueH;protein_id=WP_051482305.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2514512 2516788 . - . ID=gene-LPH41_RS10595;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LPH41_RS10595;old_locus_tag=LPH41_10595 NZ_CP087680.1 Protein Homology CDS 2514512 2516788 . - 0 ID=cds-WP_230439284.1;Parent=gene-LPH41_RS10595;Dbxref=Genbank:WP_230439284.1;Name=WP_230439284.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894720.1;locus_tag=LPH41_RS10595;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_230439284.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2517421 2518311 . - . ID=gene-LPH41_RS10600;Name=LPH41_RS10600;end_range=2518311,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS10600;old_locus_tag=LPH41_10600;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 2517421 2518311 . - 0 ID=cds-LPH41_RS10600;Parent=gene-LPH41_RS10600;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2518311,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574667.1;locus_tag=LPH41_RS10600;partial=true;product=D-hexose-6-phosphate mutarotase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2518638 2519405 . + . ID=gene-LPH41_RS10605;Name=LPH41_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10605;old_locus_tag=LPH41_10605 NZ_CP087680.1 Protein Homology CDS 2518638 2519405 . + 0 ID=cds-WP_038271148.1;Parent=gene-LPH41_RS10605;Dbxref=Genbank:WP_038271148.1;Name=WP_038271148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903483.1;locus_tag=LPH41_RS10605;product=coniferyl-alcohol dehydrogenase;protein_id=WP_038271148.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2520239 2521738 . - . ID=gene-LPH41_RS10610;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LPH41_RS10610;old_locus_tag=LPH41_10610 NZ_CP087680.1 Protein Homology CDS 2520239 2521738 . - 0 ID=cds-WP_038271149.1;Parent=gene-LPH41_RS10610;Dbxref=Genbank:WP_038271149.1;Name=WP_038271149.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368988.1;locus_tag=LPH41_RS10610;product=glycerol kinase GlpK;protein_id=WP_038271149.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2521793 2522620 . - . ID=gene-LPH41_RS10615;Name=LPH41_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10615;old_locus_tag=LPH41_10615 NZ_CP087680.1 Protein Homology CDS 2521793 2522620 . - 0 ID=cds-WP_038271150.1;Parent=gene-LPH41_RS10615;Dbxref=Genbank:WP_038271150.1;Name=WP_038271150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083443.1;locus_tag=LPH41_RS10615;product=aquaporin family protein;protein_id=WP_038271150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2522708 2524231 . - . ID=gene-LPH41_RS10620;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LPH41_RS10620;old_locus_tag=LPH41_10620 NZ_CP087680.1 Protein Homology CDS 2522708 2524231 . - 0 ID=cds-WP_038271151.1;Parent=gene-LPH41_RS10620;Dbxref=Genbank:WP_038271151.1;Name=WP_038271151.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894714.1;locus_tag=LPH41_RS10620;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_038271151.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2525868 2525999 . + . ID=gene-LPH41_RS12060;Name=LPH41_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12060 NZ_CP087680.1 GeneMarkS-2+ CDS 2525868 2525999 . + 0 ID=cds-WP_267903154.1;Parent=gene-LPH41_RS12060;Dbxref=Genbank:WP_267903154.1;Name=WP_267903154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12060;product=hypothetical protein;protein_id=WP_267903154.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2526036 2528006 . + . ID=gene-LPH41_RS10625;Name=LPH41_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10625;old_locus_tag=LPH41_10625 NZ_CP087680.1 Protein Homology CDS 2526036 2528006 . + 0 ID=cds-WP_038271152.1;Parent=gene-LPH41_RS10625;Dbxref=Genbank:WP_038271152.1;Name=WP_038271152.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346708.1;locus_tag=LPH41_RS10625;product=oligopeptide transporter%2C OPT family;protein_id=WP_038271152.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2528433 2530499 . + . ID=gene-LPH41_RS10630;Name=LPH41_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10630;old_locus_tag=LPH41_10630 NZ_CP087680.1 Protein Homology CDS 2528433 2530499 . + 0 ID=cds-WP_038271153.1;Parent=gene-LPH41_RS10630;Dbxref=Genbank:WP_038271153.1;Name=WP_038271153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169463.1;locus_tag=LPH41_RS10630;product=S9 family peptidase;protein_id=WP_038271153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2530989 2532929 . - . ID=gene-LPH41_RS10635;Name=LPH41_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10635;old_locus_tag=LPH41_10635 NZ_CP087680.1 Protein Homology CDS 2530989 2532929 . - 0 ID=cds-WP_230439285.1;Parent=gene-LPH41_RS10635;Dbxref=Genbank:WP_230439285.1;Name=WP_230439285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382663.1;locus_tag=LPH41_RS10635;product=PQQ-binding-like beta-propeller repeat protein;protein_id=WP_230439285.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2533993 2534454 . - . ID=gene-LPH41_RS10640;Name=LPH41_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10640;old_locus_tag=LPH41_10640 NZ_CP087680.1 Protein Homology CDS 2533993 2534454 . - 0 ID=cds-WP_201745846.1;Parent=gene-LPH41_RS10640;Dbxref=Genbank:WP_201745846.1;Name=WP_201745846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382662.1;locus_tag=LPH41_RS10640;product=hypothetical protein;protein_id=WP_201745846.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2535019 2535369 . + . ID=gene-LPH41_RS10645;Name=LPH41_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10645;old_locus_tag=LPH41_10645 NZ_CP087680.1 GeneMarkS-2+ CDS 2535019 2535369 . + 0 ID=cds-WP_152536610.1;Parent=gene-LPH41_RS10645;Dbxref=Genbank:WP_152536610.1;Name=WP_152536610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10645;product=hypothetical protein;protein_id=WP_152536610.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2535372 2536241 . + . ID=gene-LPH41_RS10650;Name=LPH41_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10650;old_locus_tag=LPH41_10650 NZ_CP087680.1 Protein Homology CDS 2535372 2536241 . + 0 ID=cds-WP_038271155.1;Parent=gene-LPH41_RS10650;Dbxref=Genbank:WP_038271155.1;Name=WP_038271155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LPH41_RS10650;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038271155.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2537608 2538192 . - . ID=gene-LPH41_RS10655;Name=LPH41_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10655;old_locus_tag=LPH41_10655 NZ_CP087680.1 Protein Homology CDS 2537608 2538192 . - 0 ID=cds-WP_038271157.1;Parent=gene-LPH41_RS10655;Dbxref=Genbank:WP_038271157.1;Name=WP_038271157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019337938.1;locus_tag=LPH41_RS10655;product=manganese efflux pump MntP family protein;protein_id=WP_038271157.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2539197 2541140 . - . ID=gene-LPH41_RS10660;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LPH41_RS10660;old_locus_tag=LPH41_10660 NZ_CP087680.1 Protein Homology CDS 2539197 2541140 . - 0 ID=cds-WP_038271158.1;Parent=gene-LPH41_RS10660;Dbxref=Genbank:WP_038271158.1;Name=WP_038271158.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852028.1;locus_tag=LPH41_RS10660;product=acetate--CoA ligase;protein_id=WP_038271158.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2541918 2542235 . + . ID=gene-LPH41_RS10665;Name=LPH41_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10665;old_locus_tag=LPH41_10665 NZ_CP087680.1 Protein Homology CDS 2541918 2542235 . + 0 ID=cds-WP_038271159.1;Parent=gene-LPH41_RS10665;Dbxref=Genbank:WP_038271159.1;Name=WP_038271159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451668.1;locus_tag=LPH41_RS10665;product=DUF485 domain-containing protein;protein_id=WP_038271159.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2542232 2543971 . + . ID=gene-LPH41_RS10670;Name=LPH41_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10670;old_locus_tag=LPH41_10670 NZ_CP087680.1 Protein Homology CDS 2542232 2543971 . + 0 ID=cds-WP_038271160.1;Parent=gene-LPH41_RS10670;Dbxref=Genbank:WP_038271160.1;Name=WP_038271160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894699.1;locus_tag=LPH41_RS10670;product=cation acetate symporter;protein_id=WP_038271160.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2544275 2544442 . - . ID=gene-LPH41_RS10675;Name=LPH41_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10675;old_locus_tag=LPH41_10675 NZ_CP087680.1 GeneMarkS-2+ CDS 2544275 2544442 . - 0 ID=cds-WP_160165167.1;Parent=gene-LPH41_RS10675;Dbxref=Genbank:WP_160165167.1;Name=WP_160165167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10675;product=hypothetical protein;protein_id=WP_160165167.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2545333 2547240 . + . ID=gene-LPH41_RS10680;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LPH41_RS10680;old_locus_tag=LPH41_10680 NZ_CP087680.1 Protein Homology CDS 2545333 2547240 . + 0 ID=cds-WP_038271161.1;Parent=gene-LPH41_RS10680;Dbxref=Genbank:WP_038271161.1;Name=WP_038271161.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088288.1;locus_tag=LPH41_RS10680;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_038271161.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2547349 2548095 . - . ID=gene-LPH41_RS10685;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LPH41_RS10685;old_locus_tag=LPH41_10685 NZ_CP087680.1 Protein Homology CDS 2547349 2548095 . - 0 ID=cds-WP_051482307.1;Parent=gene-LPH41_RS10685;Dbxref=Genbank:WP_051482307.1;Name=WP_051482307.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300430.1;locus_tag=LPH41_RS10685;product=DNA repair protein RecO;protein_id=WP_051482307.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2548315 2549211 . - . ID=gene-LPH41_RS10690;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LPH41_RS10690;old_locus_tag=LPH41_10690 NZ_CP087680.1 Protein Homology CDS 2548315 2549211 . - 0 ID=cds-WP_038271162.1;Parent=gene-LPH41_RS10690;Dbxref=Genbank:WP_038271162.1;Name=WP_038271162.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098038.1;locus_tag=LPH41_RS10690;product=GTPase Era;protein_id=WP_038271162.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2549208 2549891 . - . ID=gene-LPH41_RS10695;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LPH41_RS10695;old_locus_tag=LPH41_10695 NZ_CP087680.1 Protein Homology CDS 2549208 2549891 . - 0 ID=cds-WP_038271163.1;Parent=gene-LPH41_RS10695;Dbxref=Genbank:WP_038271163.1;Name=WP_038271163.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083431.1;locus_tag=LPH41_RS10695;product=ribonuclease III;protein_id=WP_038271163.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2549878 2550063 . - . ID=gene-LPH41_RS10700;Name=LPH41_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10700;old_locus_tag=LPH41_10700 NZ_CP087680.1 Protein Homology CDS 2549878 2550063 . - 0 ID=cds-WP_230428223.1;Parent=gene-LPH41_RS10700;Dbxref=Genbank:WP_230428223.1;Name=WP_230428223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027463.2;locus_tag=LPH41_RS10700;product=DUF4845 domain-containing protein;protein_id=WP_230428223.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2550274 2551068 . - . ID=gene-LPH41_RS10705;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LPH41_RS10705;old_locus_tag=LPH41_10705 NZ_CP087680.1 Protein Homology CDS 2550274 2551068 . - 0 ID=cds-WP_038271164.1;Parent=gene-LPH41_RS10705;Dbxref=Genbank:WP_038271164.1;Name=WP_038271164.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852731.1;locus_tag=LPH41_RS10705;product=signal peptidase I;protein_id=WP_038271164.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2551171 2552979 . - . ID=gene-LPH41_RS10710;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LPH41_RS10710;old_locus_tag=LPH41_10710 NZ_CP087680.1 Protein Homology CDS 2551171 2552979 . - 0 ID=cds-WP_114867221.1;Parent=gene-LPH41_RS10710;Dbxref=Genbank:WP_114867221.1;Name=WP_114867221.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083428.1;locus_tag=LPH41_RS10710;product=translation elongation factor 4;protein_id=WP_114867221.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2553160 2554704 . - . ID=gene-LPH41_RS10715;Name=LPH41_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10715;old_locus_tag=LPH41_10715 NZ_CP087680.1 Protein Homology CDS 2553160 2554704 . - 0 ID=cds-WP_038271165.1;Parent=gene-LPH41_RS10715;Dbxref=Genbank:WP_038271165.1;Name=WP_038271165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160027.1;locus_tag=LPH41_RS10715;product=DegQ family serine endoprotease;protein_id=WP_038271165.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2554812 2555552 . - . ID=gene-LPH41_RS10720;Name=LPH41_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10720;old_locus_tag=LPH41_10720 NZ_CP087680.1 Protein Homology CDS 2554812 2555552 . - 0 ID=cds-WP_038271166.1;Parent=gene-LPH41_RS10720;Dbxref=Genbank:WP_038271166.1;Name=WP_038271166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083426.1;locus_tag=LPH41_RS10720;product=sigma-E factor negative regulatory protein;protein_id=WP_038271166.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2555549 2556169 . - . ID=gene-LPH41_RS10725;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LPH41_RS10725;old_locus_tag=LPH41_10725 NZ_CP087680.1 Protein Homology CDS 2555549 2556169 . - 0 ID=cds-WP_038271167.1;Parent=gene-LPH41_RS10725;Dbxref=Genbank:WP_038271167.1;Name=WP_038271167.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962205.1;locus_tag=LPH41_RS10725;product=RNA polymerase sigma factor RpoE;protein_id=WP_038271167.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2556510 2556740 . + . ID=gene-LPH41_RS10730;Name=LPH41_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10730;old_locus_tag=LPH41_10730 NZ_CP087680.1 GeneMarkS-2+ CDS 2556510 2556740 . + 0 ID=cds-WP_051482308.1;Parent=gene-LPH41_RS10730;Dbxref=Genbank:WP_051482308.1;Name=WP_051482308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10730;product=hypothetical protein;protein_id=WP_051482308.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2557329 2557866 . + . ID=gene-LPH41_RS10735;Name=LPH41_RS10735;end_range=2557866,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS10735;old_locus_tag=LPH41_10735;partial=true;pseudo=true;start_range=.,2557329 NZ_CP087680.1 Protein Homology CDS 2557329 2557866 . + 0 ID=cds-LPH41_RS10735;Parent=gene-LPH41_RS10735;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006631,GO:0016491,GO:0016616;end_range=2557866,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931134.1;locus_tag=LPH41_RS10735;partial=true;product=3-hydroxyacyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,2557329;transl_table=11 NZ_CP087680.1 RefSeq gene 2557972 2560854 . - . ID=gene-LPH41_RS10740;Name=LPH41_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10740;old_locus_tag=LPH41_10740 NZ_CP087680.1 Protein Homology CDS 2557972 2560854 . - 0 ID=cds-WP_038271168.1;Parent=gene-LPH41_RS10740;Dbxref=Genbank:WP_038271168.1;Name=WP_038271168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083424.1;locus_tag=LPH41_RS10740;product=TonB-dependent receptor;protein_id=WP_038271168.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2562473 2562595 . + . ID=gene-LPH41_RS12065;Name=LPH41_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12065 NZ_CP087680.1 GeneMarkS-2+ CDS 2562473 2562595 . + 0 ID=cds-WP_267903153.1;Parent=gene-LPH41_RS12065;Dbxref=Genbank:WP_267903153.1;Name=WP_267903153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12065;product=hypothetical protein;protein_id=WP_267903153.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2562789 2565173 . + . ID=gene-LPH41_RS10745;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LPH41_RS10745;old_locus_tag=LPH41_10745 NZ_CP087680.1 Protein Homology CDS 2562789 2565173 . + 0 ID=cds-WP_038271170.1;Parent=gene-LPH41_RS10745;Dbxref=Genbank:WP_038271170.1;Name=WP_038271170.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083423.1;locus_tag=LPH41_RS10745;product=penicillin-binding protein 1C;protein_id=WP_038271170.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2565829 2566302 . + . ID=gene-LPH41_RS10750;Name=LPH41_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10750;old_locus_tag=LPH41_10750 NZ_CP087680.1 Protein Homology CDS 2565829 2566302 . + 0 ID=cds-WP_038271172.1;Parent=gene-LPH41_RS10750;Dbxref=Genbank:WP_038271172.1;Name=WP_038271172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894682.1;locus_tag=LPH41_RS10750;product=Hsp20/alpha crystallin family protein;protein_id=WP_038271172.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2566454 2567332 . + . ID=gene-LPH41_RS10755;Name=LPH41_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10755;old_locus_tag=LPH41_10755 NZ_CP087680.1 Protein Homology CDS 2566454 2567332 . + 0 ID=cds-WP_038271173.1;Parent=gene-LPH41_RS10755;Dbxref=Genbank:WP_038271173.1;Name=WP_038271173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446026.1;locus_tag=LPH41_RS10755;product=J domain-containing protein;protein_id=WP_038271173.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2567804 2570056 . + . ID=gene-LPH41_RS10760;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LPH41_RS10760;old_locus_tag=LPH41_10760 NZ_CP087680.1 Protein Homology CDS 2567804 2570056 . + 0 ID=cds-WP_114867156.1;Parent=gene-LPH41_RS10760;Dbxref=Genbank:WP_114867156.1;Name=WP_114867156.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851311.1;locus_tag=LPH41_RS10760;product=catalase/peroxidase HPI;protein_id=WP_114867156.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2571110 2572294 . + . ID=gene-LPH41_RS10765;Name=LPH41_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10765;old_locus_tag=LPH41_10765 NZ_CP087680.1 Protein Homology CDS 2571110 2572294 . + 0 ID=cds-WP_038271175.1;Parent=gene-LPH41_RS10765;Dbxref=Genbank:WP_038271175.1;Name=WP_038271175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115444.1;locus_tag=LPH41_RS10765;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_038271175.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2572790 2573356 . + . ID=gene-LPH41_RS10770;Name=LPH41_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10770;old_locus_tag=LPH41_10770 NZ_CP087680.1 Protein Homology CDS 2572790 2573356 . + 0 ID=cds-WP_230439286.1;Parent=gene-LPH41_RS10770;Dbxref=Genbank:WP_230439286.1;Name=WP_230439286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851314.1;locus_tag=LPH41_RS10770;product=YqgE/AlgH family protein;protein_id=WP_230439286.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2573349 2573816 . + . ID=gene-LPH41_RS10775;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LPH41_RS10775;old_locus_tag=LPH41_10775 NZ_CP087680.1 Protein Homology CDS 2573349 2573816 . + 0 ID=cds-WP_038271178.1;Parent=gene-LPH41_RS10775;Dbxref=Genbank:WP_038271178.1;Name=WP_038271178.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302529.1;locus_tag=LPH41_RS10775;product=Holliday junction resolvase RuvX;protein_id=WP_038271178.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2573844 2574782 . + . ID=gene-LPH41_RS10780;Name=LPH41_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10780;old_locus_tag=LPH41_10780 NZ_CP087680.1 Protein Homology CDS 2573844 2574782 . + 0 ID=cds-WP_038271179.1;Parent=gene-LPH41_RS10780;Dbxref=Genbank:WP_038271179.1;Name=WP_038271179.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088307.1;locus_tag=LPH41_RS10780;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_038271179.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2574997 2575182 . + . ID=gene-LPH41_RS10785;Name=LPH41_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10785;old_locus_tag=LPH41_10785 NZ_CP087680.1 GeneMarkS-2+ CDS 2574997 2575182 . + 0 ID=cds-WP_152536612.1;Parent=gene-LPH41_RS10785;Dbxref=Genbank:WP_152536612.1;Name=WP_152536612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10785;product=hypothetical protein;protein_id=WP_152536612.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2575273 2577780 . + . ID=gene-LPH41_RS10790;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=LPH41_RS10790;old_locus_tag=LPH41_10790 NZ_CP087680.1 Protein Homology CDS 2575273 2577780 . + 0 ID=cds-WP_051482310.1;Parent=gene-LPH41_RS10790;Dbxref=Genbank:WP_051482310.1;Name=WP_051482310.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851316.1;locus_tag=LPH41_RS10790;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_051482310.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2577777 2578745 . + . ID=gene-LPH41_RS10795;Name=LPH41_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10795;old_locus_tag=LPH41_10795 NZ_CP087680.1 Protein Homology CDS 2577777 2578745 . + 0 ID=cds-WP_038271181.1;Parent=gene-LPH41_RS10795;Dbxref=Genbank:WP_038271181.1;Name=WP_038271181.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894672.1;locus_tag=LPH41_RS10795;product=homoserine kinase;protein_id=WP_038271181.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2578797 2580089 . + . ID=gene-LPH41_RS10800;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LPH41_RS10800;old_locus_tag=LPH41_10800 NZ_CP087680.1 Protein Homology CDS 2578797 2580089 . + 0 ID=cds-WP_038271220.1;Parent=gene-LPH41_RS10800;Dbxref=Genbank:WP_038271220.1;Name=WP_038271220.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088310.1;locus_tag=LPH41_RS10800;product=threonine synthase;protein_id=WP_038271220.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2580453 2581853 . + . ID=gene-LPH41_RS10805;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LPH41_RS10805;old_locus_tag=LPH41_10805 NZ_CP087680.1 Protein Homology CDS 2580453 2581853 . + 0 ID=cds-WP_038271182.1;Parent=gene-LPH41_RS10805;Dbxref=Genbank:WP_038271182.1;Name=WP_038271182.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851319.1;locus_tag=LPH41_RS10805;product=histidine--tRNA ligase;protein_id=WP_038271182.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2581856 2582098 . + . ID=gene-LPH41_RS10810;Name=LPH41_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10810;old_locus_tag=LPH41_10810 NZ_CP087680.1 GeneMarkS-2+ CDS 2581856 2582098 . + 0 ID=cds-WP_038271183.1;Parent=gene-LPH41_RS10810;Dbxref=Genbank:WP_038271183.1;Name=WP_038271183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10810;product=hypothetical protein;protein_id=WP_038271183.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2582647 2582973 . + . ID=gene-LPH41_RS10815;Name=LPH41_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10815;old_locus_tag=LPH41_10815 NZ_CP087680.1 Protein Homology CDS 2582647 2582973 . + 0 ID=cds-WP_038271184.1;Parent=gene-LPH41_RS10815;Dbxref=Genbank:WP_038271184.1;Name=WP_038271184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908286.1;locus_tag=LPH41_RS10815;product=YerC/YecD family TrpR-related protein;protein_id=WP_038271184.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2582983 2583897 . + . ID=gene-LPH41_RS10820;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LPH41_RS10820;old_locus_tag=LPH41_10820 NZ_CP087680.1 Protein Homology CDS 2582983 2583897 . + 0 ID=cds-WP_038271185.1;Parent=gene-LPH41_RS10820;Dbxref=Genbank:WP_038271185.1;Name=WP_038271185.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237692.1;locus_tag=LPH41_RS10820;product=ATP phosphoribosyltransferase;protein_id=WP_038271185.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2583894 2585189 . + . ID=gene-LPH41_RS10825;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LPH41_RS10825;old_locus_tag=LPH41_10825 NZ_CP087680.1 Protein Homology CDS 2583894 2585189 . + 0 ID=cds-WP_038271186.1;Parent=gene-LPH41_RS10825;Dbxref=Genbank:WP_038271186.1;Name=WP_038271186.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155317.1;locus_tag=LPH41_RS10825;product=histidinol dehydrogenase;protein_id=WP_038271186.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2585186 2586283 . + . ID=gene-LPH41_RS10830;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LPH41_RS10830;old_locus_tag=LPH41_10830 NZ_CP087680.1 Protein Homology CDS 2585186 2586283 . + 0 ID=cds-WP_038271187.1;Parent=gene-LPH41_RS10830;Dbxref=Genbank:WP_038271187.1;Name=WP_038271187.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083408.1;locus_tag=LPH41_RS10830;product=histidinol-phosphate transaminase;protein_id=WP_038271187.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2586280 2587407 . + . ID=gene-LPH41_RS10835;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LPH41_RS10835;old_locus_tag=LPH41_10835 NZ_CP087680.1 Protein Homology CDS 2586280 2587407 . + 0 ID=cds-WP_038271188.1;Parent=gene-LPH41_RS10835;Dbxref=Genbank:WP_038271188.1;Name=WP_038271188.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571443.1;locus_tag=LPH41_RS10835;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_038271188.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2587404 2588006 . + . ID=gene-LPH41_RS10840;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LPH41_RS10840;old_locus_tag=LPH41_10840 NZ_CP087680.1 Protein Homology CDS 2587404 2588006 . + 0 ID=cds-WP_038271189.1;Parent=gene-LPH41_RS10840;Dbxref=Genbank:WP_038271189.1;Name=WP_038271189.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661417.1;locus_tag=LPH41_RS10840;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_038271189.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2588003 2588812 . + . ID=gene-LPH41_RS10845;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LPH41_RS10845;old_locus_tag=LPH41_10845 NZ_CP087680.1 Protein Homology CDS 2588003 2588812 . + 0 ID=cds-WP_038271190.1;Parent=gene-LPH41_RS10845;Dbxref=Genbank:WP_038271190.1;Name=WP_038271190.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083405.1;locus_tag=LPH41_RS10845;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_038271190.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2588922 2589698 . + . ID=gene-LPH41_RS10850;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LPH41_RS10850;old_locus_tag=LPH41_10850 NZ_CP087680.1 Protein Homology CDS 2588922 2589698 . + 0 ID=cds-WP_038271191.1;Parent=gene-LPH41_RS10850;Dbxref=Genbank:WP_038271191.1;Name=WP_038271191.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503177.1;locus_tag=LPH41_RS10850;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_038271191.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2589688 2590308 . + . ID=gene-LPH41_RS10855;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LPH41_RS10855;old_locus_tag=LPH41_10855 NZ_CP087680.1 Protein Homology CDS 2589688 2590308 . + 0 ID=cds-WP_038271192.1;Parent=gene-LPH41_RS10855;Dbxref=Genbank:WP_038271192.1;Name=WP_038271192.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851328.1;locus_tag=LPH41_RS10855;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_038271192.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2590875 2591150 . - . ID=gene-LPH41_RS10860;Name=LPH41_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10860;old_locus_tag=LPH41_10860 NZ_CP087680.1 GeneMarkS-2+ CDS 2590875 2591150 . - 0 ID=cds-WP_038271193.1;Parent=gene-LPH41_RS10860;Dbxref=Genbank:WP_038271193.1;Name=WP_038271193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10860;product=hypothetical protein;protein_id=WP_038271193.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2592035 2593003 . - . ID=gene-LPH41_RS10865;Name=LPH41_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10865;old_locus_tag=LPH41_10865 NZ_CP087680.1 Protein Homology CDS 2592035 2593003 . - 0 ID=cds-WP_081755435.1;Parent=gene-LPH41_RS10865;Dbxref=Genbank:WP_081755435.1;Name=WP_081755435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997416.1;locus_tag=LPH41_RS10865;product=peptidase C13;protein_id=WP_081755435.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2593246 2593410 . + . ID=gene-LPH41_RS10870;Name=LPH41_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10870;old_locus_tag=LPH41_10870 NZ_CP087680.1 GeneMarkS-2+ CDS 2593246 2593410 . + 0 ID=cds-WP_160199356.1;Parent=gene-LPH41_RS10870;Dbxref=Genbank:WP_160199356.1;Name=WP_160199356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10870;product=hypothetical protein;protein_id=WP_160199356.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2593838 2594020 . + . ID=gene-LPH41_RS10875;Name=LPH41_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10875;old_locus_tag=LPH41_10875 NZ_CP087680.1 GeneMarkS-2+ CDS 2593838 2594020 . + 0 ID=cds-WP_038271196.1;Parent=gene-LPH41_RS10875;Dbxref=Genbank:WP_038271196.1;Name=WP_038271196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10875;product=hypothetical protein;protein_id=WP_038271196.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2594159 2594857 . - . ID=gene-LPH41_RS10880;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=LPH41_RS10880;old_locus_tag=LPH41_10880 NZ_CP087680.1 Protein Homology CDS 2594159 2594857 . - 0 ID=cds-WP_038271197.1;Parent=gene-LPH41_RS10880;Dbxref=Genbank:WP_038271197.1;Name=WP_038271197.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303202.1;locus_tag=LPH41_RS10880;product=acireductone synthase;protein_id=WP_038271197.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2594860 2595426 . - . ID=gene-LPH41_RS10885;Name=LPH41_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10885;old_locus_tag=LPH41_10885 NZ_CP087680.1 Protein Homology CDS 2594860 2595426 . - 0 ID=cds-WP_038271198.1;Parent=gene-LPH41_RS10885;Dbxref=Genbank:WP_038271198.1;Name=WP_038271198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571451.1;locus_tag=LPH41_RS10885;product=acireductone dioxygenase;protein_id=WP_038271198.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2595462 2596118 . - . ID=gene-LPH41_RS10890;Name=LPH41_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10890;old_locus_tag=LPH41_10890 NZ_CP087680.1 Protein Homology CDS 2595462 2596118 . - 0 ID=cds-WP_038271199.1;Parent=gene-LPH41_RS10890;Dbxref=Genbank:WP_038271199.1;Name=WP_038271199.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851331.1;locus_tag=LPH41_RS10890;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_038271199.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2596156 2597580 . - . ID=gene-LPH41_RS10895;Name=LPH41_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10895;old_locus_tag=LPH41_10895 NZ_CP087680.1 Protein Homology CDS 2596156 2597580 . - 0 ID=cds-WP_038271200.1;Parent=gene-LPH41_RS10895;Dbxref=Genbank:WP_038271200.1;Name=WP_038271200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851332.1;locus_tag=LPH41_RS10895;product=amino acid permease;protein_id=WP_038271200.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2597652 2599124 . - . ID=gene-LPH41_RS10900;Name=LPH41_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10900;old_locus_tag=LPH41_10900 NZ_CP087680.1 Protein Homology CDS 2597652 2599124 . - 0 ID=cds-WP_038271201.1;Parent=gene-LPH41_RS10900;Dbxref=Genbank:WP_038271201.1;Name=WP_038271201.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036992.1;locus_tag=LPH41_RS10900;product=amino acid permease;protein_id=WP_038271201.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2599587 2600828 . - . ID=gene-LPH41_RS10905;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LPH41_RS10905;old_locus_tag=LPH41_10905 NZ_CP087680.1 Protein Homology CDS 2599587 2600828 . - 0 ID=cds-WP_038271202.1;Parent=gene-LPH41_RS10905;Dbxref=Genbank:WP_038271202.1;Name=WP_038271202.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915394.1;locus_tag=LPH41_RS10905;product=phosphoglycerate dehydrogenase;protein_id=WP_038271202.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2601011 2602399 . + . ID=gene-LPH41_RS10910;Name=LPH41_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10910;old_locus_tag=LPH41_10910 NZ_CP087680.1 Protein Homology CDS 2601011 2602399 . + 0 ID=cds-WP_038271203.1;Parent=gene-LPH41_RS10910;Dbxref=Genbank:WP_038271203.1;Name=WP_038271203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019399725.1;locus_tag=LPH41_RS10910;product=FAD-binding oxidoreductase;protein_id=WP_038271203.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2602542 2603108 . - . ID=gene-LPH41_RS10915;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=LPH41_RS10915;old_locus_tag=LPH41_10915 NZ_CP087680.1 Protein Homology CDS 2602542 2603108 . - 0 ID=cds-WP_114867220.1;Parent=gene-LPH41_RS10915;Dbxref=Genbank:WP_114867220.1;Name=WP_114867220.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603592.1;locus_tag=LPH41_RS10915;product=elongation factor P-like protein YeiP;protein_id=WP_114867220.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2603714 2604157 . - . ID=gene-LPH41_RS10920;Name=LPH41_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10920;old_locus_tag=LPH41_10920 NZ_CP087680.1 Protein Homology CDS 2603714 2604157 . - 0 ID=cds-WP_038271205.1;Parent=gene-LPH41_RS10920;Dbxref=Genbank:WP_038271205.1;Name=WP_038271205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851337.1;locus_tag=LPH41_RS10920;product=hypothetical protein;protein_id=WP_038271205.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2604292 2604819 . - . ID=gene-LPH41_RS10925;Name=LPH41_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10925;old_locus_tag=LPH41_10925 NZ_CP087680.1 GeneMarkS-2+ CDS 2604292 2604819 . - 0 ID=cds-WP_160165171.1;Parent=gene-LPH41_RS10925;Dbxref=Genbank:WP_160165171.1;Name=WP_160165171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10925;product=hypothetical protein;protein_id=WP_160165171.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2604981 2605901 . - . ID=gene-LPH41_RS10930;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LPH41_RS10930;old_locus_tag=LPH41_10930 NZ_CP087680.1 Protein Homology CDS 2604981 2605901 . - 0 ID=cds-WP_038271207.1;Parent=gene-LPH41_RS10930;Dbxref=Genbank:WP_038271207.1;Name=WP_038271207.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088330.1;locus_tag=LPH41_RS10930;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_038271207.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2606275 2606841 . - . ID=gene-LPH41_RS10935;Name=LPH41_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10935;old_locus_tag=LPH41_10935 NZ_CP087680.1 Protein Homology CDS 2606275 2606841 . - 0 ID=cds-WP_200866196.1;Parent=gene-LPH41_RS10935;Dbxref=Genbank:WP_200866196.1;Name=WP_200866196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=LPH41_RS10935;product=LysE family translocator;protein_id=WP_200866196.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2607194 2607415 . - . ID=gene-LPH41_RS10940;Name=LPH41_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10940;old_locus_tag=LPH41_10940 NZ_CP087680.1 Protein Homology CDS 2607194 2607415 . - 0 ID=cds-WP_081755434.1;Parent=gene-LPH41_RS10940;Dbxref=Genbank:WP_081755434.1;Name=WP_081755434.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012607.2;locus_tag=LPH41_RS10940;product=hypothetical protein;protein_id=WP_081755434.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2607577 2607702 . - . ID=gene-LPH41_RS12070;Name=LPH41_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12070 NZ_CP087680.1 GeneMarkS-2+ CDS 2607577 2607702 . - 0 ID=cds-WP_267903152.1;Parent=gene-LPH41_RS12070;Dbxref=Genbank:WP_267903152.1;Name=WP_267903152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12070;product=hypothetical protein;protein_id=WP_267903152.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2607874 2608236 . - . ID=gene-LPH41_RS10945;Name=LPH41_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10945;old_locus_tag=LPH41_10945 NZ_CP087680.1 GeneMarkS-2+ CDS 2607874 2608236 . - 0 ID=cds-WP_152536614.1;Parent=gene-LPH41_RS10945;Dbxref=Genbank:WP_152536614.1;Name=WP_152536614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10945;product=hypothetical protein;protein_id=WP_152536614.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2608243 2608455 . - . ID=gene-LPH41_RS10950;Name=LPH41_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10950;old_locus_tag=LPH41_10950 NZ_CP087680.1 GeneMarkS-2+ CDS 2608243 2608455 . - 0 ID=cds-WP_162814100.1;Parent=gene-LPH41_RS10950;Dbxref=Genbank:WP_162814100.1;Name=WP_162814100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10950;product=hypothetical protein;protein_id=WP_162814100.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2608750 2619447 . + . ID=gene-LPH41_RS10955;Name=LPH41_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10955;old_locus_tag=LPH41_10955 NZ_CP087680.1 Protein Homology CDS 2608750 2619447 . + 0 ID=cds-WP_230439287.1;Parent=gene-LPH41_RS10955;Dbxref=Genbank:WP_230439287.1;Name=WP_230439287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382792.1;locus_tag=LPH41_RS10955;product=hemagglutinin repeat-containing protein;protein_id=WP_230439287.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2619459 2619851 . + . ID=gene-LPH41_RS10960;Name=LPH41_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10960;old_locus_tag=LPH41_10960 NZ_CP087680.1 Protein Homology CDS 2619459 2619851 . + 0 ID=cds-WP_038273304.1;Parent=gene-LPH41_RS10960;Dbxref=Genbank:WP_038273304.1;Name=WP_038273304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH41_RS10960;product=DUF596 domain-containing protein;protein_id=WP_038273304.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2620352 2621713 . + . ID=gene-LPH41_RS10965;Name=LPH41_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10965;old_locus_tag=LPH41_10965 NZ_CP087680.1 Protein Homology CDS 2620352 2621713 . + 0 ID=cds-WP_230439288.1;Parent=gene-LPH41_RS10965;Dbxref=Genbank:WP_230439288.1;Name=WP_230439288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS10965;product=DUF769 domain-containing protein;protein_id=WP_230439288.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2621710 2622243 . + . ID=gene-LPH41_RS10970;Name=LPH41_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10970;old_locus_tag=LPH41_10970 NZ_CP087680.1 GeneMarkS-2+ CDS 2621710 2622243 . + 0 ID=cds-WP_038273268.1;Parent=gene-LPH41_RS10970;Dbxref=Genbank:WP_038273268.1;Name=WP_038273268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10970;product=hypothetical protein;protein_id=WP_038273268.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2622397 2623533 . + . ID=gene-LPH41_RS10975;Name=LPH41_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10975;old_locus_tag=LPH41_10975 NZ_CP087680.1 Protein Homology CDS 2622397 2623533 . + 0 ID=cds-WP_114867151.1;Parent=gene-LPH41_RS10975;Dbxref=Genbank:WP_114867151.1;Name=WP_114867151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH41_RS10975;product=DUF769 domain-containing protein;protein_id=WP_114867151.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2623545 2623937 . + . ID=gene-LPH41_RS10980;Name=LPH41_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10980;old_locus_tag=LPH41_10980 NZ_CP087680.1 Protein Homology CDS 2623545 2623937 . + 0 ID=cds-WP_038273215.1;Parent=gene-LPH41_RS10980;Dbxref=Genbank:WP_038273215.1;Name=WP_038273215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382790.1;locus_tag=LPH41_RS10980;product=DUF596 domain-containing protein;protein_id=WP_038273215.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2624017 2624370 . + . ID=gene-LPH41_RS10985;Name=LPH41_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10985;old_locus_tag=LPH41_10985 NZ_CP087680.1 Protein Homology CDS 2624017 2624370 . + 0 ID=cds-WP_114867150.1;Parent=gene-LPH41_RS10985;Dbxref=Genbank:WP_114867150.1;Name=WP_114867150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098383.1;locus_tag=LPH41_RS10985;product=DUF769 domain-containing protein;protein_id=WP_114867150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2624382 2624774 . + . ID=gene-LPH41_RS10990;Name=LPH41_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10990;old_locus_tag=LPH41_10990 NZ_CP087680.1 Protein Homology CDS 2624382 2624774 . + 0 ID=cds-WP_038273217.1;Parent=gene-LPH41_RS10990;Dbxref=Genbank:WP_038273217.1;Name=WP_038273217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894641.1;locus_tag=LPH41_RS10990;product=DUF596 domain-containing protein;protein_id=WP_038273217.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2624746 2624910 . + . ID=gene-LPH41_RS10995;Name=LPH41_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS10995;old_locus_tag=LPH41_10995 NZ_CP087680.1 GeneMarkS-2+ CDS 2624746 2624910 . + 0 ID=cds-WP_160165237.1;Parent=gene-LPH41_RS10995;Dbxref=Genbank:WP_160165237.1;Name=WP_160165237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS10995;product=hypothetical protein;protein_id=WP_160165237.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2625209 2626384 . + . ID=gene-LPH41_RS11000;Name=LPH41_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11000;old_locus_tag=LPH41_11000 NZ_CP087680.1 Protein Homology CDS 2625209 2626384 . + 0 ID=cds-WP_205395216.1;Parent=gene-LPH41_RS11000;Dbxref=Genbank:WP_205395216.1;Name=WP_205395216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH41_RS11000;product=DNA/RNA non-specific endonuclease;protein_id=WP_205395216.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2626381 2626818 . + . ID=gene-LPH41_RS11005;Name=LPH41_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11005;old_locus_tag=LPH41_11005 NZ_CP087680.1 GeneMarkS-2+ CDS 2626381 2626818 . + 0 ID=cds-WP_038273137.1;Parent=gene-LPH41_RS11005;Dbxref=Genbank:WP_038273137.1;Name=WP_038273137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11005;product=hypothetical protein;protein_id=WP_038273137.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2626884 2627216 . + . ID=gene-LPH41_RS11010;Name=LPH41_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11010;old_locus_tag=LPH41_11010 NZ_CP087680.1 Protein Homology CDS 2626884 2627216 . + 0 ID=cds-WP_114867149.1;Parent=gene-LPH41_RS11010;Dbxref=Genbank:WP_114867149.1;Name=WP_114867149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS11010;product=DUF769 domain-containing protein;protein_id=WP_114867149.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2627221 2627607 . + . ID=gene-LPH41_RS11015;Name=LPH41_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11015;old_locus_tag=LPH41_11015 NZ_CP087680.1 Protein Homology CDS 2627221 2627607 . + 0 ID=cds-WP_038273143.1;Parent=gene-LPH41_RS11015;Dbxref=Genbank:WP_038273143.1;Name=WP_038273143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088333.1;locus_tag=LPH41_RS11015;product=DUF596 domain-containing protein;protein_id=WP_038273143.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2627687 2628040 . + . ID=gene-LPH41_RS11020;Name=LPH41_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11020;old_locus_tag=LPH41_11020 NZ_CP087680.1 Protein Homology CDS 2627687 2628040 . + 0 ID=cds-WP_114867148.1;Parent=gene-LPH41_RS11020;Dbxref=Genbank:WP_114867148.1;Name=WP_114867148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090789.1;locus_tag=LPH41_RS11020;product=DUF769 domain-containing protein;protein_id=WP_114867148.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2628052 2628444 . + . ID=gene-LPH41_RS11025;Name=LPH41_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11025;old_locus_tag=LPH41_11025 NZ_CP087680.1 Protein Homology CDS 2628052 2628444 . + 0 ID=cds-WP_038273145.1;Parent=gene-LPH41_RS11025;Dbxref=Genbank:WP_038273145.1;Name=WP_038273145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086150.1;locus_tag=LPH41_RS11025;product=DUF596 domain-containing protein;protein_id=WP_038273145.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2628859 2629098 . + . ID=gene-LPH41_RS11030;Name=LPH41_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11030;old_locus_tag=LPH41_11030 NZ_CP087680.1 GeneMarkS-2+ CDS 2628859 2629098 . + 0 ID=cds-WP_114867147.1;Parent=gene-LPH41_RS11030;Dbxref=Genbank:WP_114867147.1;Name=WP_114867147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11030;product=hypothetical protein;protein_id=WP_114867147.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2629035 2629346 . + . ID=gene-LPH41_RS11035;Name=LPH41_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11035;old_locus_tag=LPH41_11035 NZ_CP087680.1 Protein Homology CDS 2629035 2629346 . + 0 ID=cds-WP_081755498.1;Parent=gene-LPH41_RS11035;Dbxref=Genbank:WP_081755498.1;Name=WP_081755498.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025298.2;locus_tag=LPH41_RS11035;product=DNA/RNA non-specific endonuclease;protein_id=WP_081755498.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2629425 2629745 . - . ID=gene-LPH41_RS11040;Name=LPH41_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11040;old_locus_tag=LPH41_11040 NZ_CP087680.1 Protein Homology CDS 2629425 2629745 . - 0 ID=cds-WP_038273255.1;Parent=gene-LPH41_RS11040;Dbxref=Genbank:WP_038273255.1;Name=WP_038273255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117139.1;locus_tag=LPH41_RS11040;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038273255.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2629742 2630011 . - . ID=gene-LPH41_RS11045;Name=LPH41_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11045;old_locus_tag=LPH41_11045 NZ_CP087680.1 Protein Homology CDS 2629742 2630011 . - 0 ID=cds-WP_038273253.1;Parent=gene-LPH41_RS11045;Dbxref=Genbank:WP_038273253.1;Name=WP_038273253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260984.1;locus_tag=LPH41_RS11045;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_038273253.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2630410 2641083 . + . ID=gene-LPH41_RS11050;Name=LPH41_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11050;old_locus_tag=LPH41_11050 NZ_CP087680.1 Protein Homology CDS 2630410 2641083 . + 0 ID=cds-WP_230439289.1;Parent=gene-LPH41_RS11050;Dbxref=Genbank:WP_230439289.1;Name=WP_230439289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382593.1;locus_tag=LPH41_RS11050;product=hemagglutinin repeat-containing protein;protein_id=WP_230439289.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2641089 2641901 . + . ID=gene-LPH41_RS11055;Name=LPH41_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11055;old_locus_tag=LPH41_11055 NZ_CP087680.1 Protein Homology CDS 2641089 2641901 . + 0 ID=cds-WP_114867144.1;Parent=gene-LPH41_RS11055;Dbxref=Genbank:WP_114867144.1;Name=WP_114867144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852863.1;locus_tag=LPH41_RS11055;product=DUF769 domain-containing protein;protein_id=WP_114867144.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2641910 2642734 . + . ID=gene-LPH41_RS11060;Name=LPH41_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11060;old_locus_tag=LPH41_11060 NZ_CP087680.1 Protein Homology CDS 2641910 2642734 . + 0 ID=cds-WP_038273131.1;Parent=gene-LPH41_RS11060;Dbxref=Genbank:WP_038273131.1;Name=WP_038273131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338067.1;locus_tag=LPH41_RS11060;product=DUF769 domain-containing protein;protein_id=WP_038273131.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2642749 2643564 . + . ID=gene-LPH41_RS11065;Name=LPH41_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11065;old_locus_tag=LPH41_11065 NZ_CP087680.1 Protein Homology CDS 2642749 2643564 . + 0 ID=cds-WP_230439290.1;Parent=gene-LPH41_RS11065;Dbxref=Genbank:WP_230439290.1;Name=WP_230439290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852863.1;locus_tag=LPH41_RS11065;product=DUF769 domain-containing protein;protein_id=WP_230439290.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2643579 2644394 . + . ID=gene-LPH41_RS11070;Name=LPH41_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11070;old_locus_tag=LPH41_11070 NZ_CP087680.1 Protein Homology CDS 2643579 2644394 . + 0 ID=cds-WP_038273126.1;Parent=gene-LPH41_RS11070;Dbxref=Genbank:WP_038273126.1;Name=WP_038273126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089585.1;locus_tag=LPH41_RS11070;product=DUF769 domain-containing protein;protein_id=WP_038273126.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2644403 2645224 . + . ID=gene-LPH41_RS11075;Name=LPH41_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11075;old_locus_tag=LPH41_11075 NZ_CP087680.1 Protein Homology CDS 2644403 2645224 . + 0 ID=cds-WP_114867143.1;Parent=gene-LPH41_RS11075;Dbxref=Genbank:WP_114867143.1;Name=WP_114867143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338067.1;locus_tag=LPH41_RS11075;product=DUF769 domain-containing protein;protein_id=WP_114867143.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2645264 2648212 . + . ID=gene-LPH41_RS11080;Name=LPH41_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11080;old_locus_tag=LPH41_11080 NZ_CP087680.1 Protein Homology CDS 2645264 2648212 . + 0 ID=cds-WP_114867142.1;Parent=gene-LPH41_RS11080;Dbxref=Genbank:WP_114867142.1;Name=WP_114867142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LPH41_RS11080;product=hemagglutinin repeat-containing protein;protein_id=WP_114867142.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2648209 2648634 . + . ID=gene-LPH41_RS11085;Name=LPH41_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11085;old_locus_tag=LPH41_11085 NZ_CP087680.1 GeneMarkS-2+ CDS 2648209 2648634 . + 0 ID=cds-WP_038273237.1;Parent=gene-LPH41_RS11085;Dbxref=Genbank:WP_038273237.1;Name=WP_038273237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11085;product=hypothetical protein;protein_id=WP_038273237.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2648699 2649028 . + . ID=gene-LPH41_RS11090;Name=LPH41_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11090;old_locus_tag=LPH41_11090 NZ_CP087680.1 Protein Homology CDS 2648699 2649028 . + 0 ID=cds-WP_114867141.1;Parent=gene-LPH41_RS11090;Dbxref=Genbank:WP_114867141.1;Name=WP_114867141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS11090;product=DUF769 domain-containing protein;protein_id=WP_114867141.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2649040 2649432 . + . ID=gene-LPH41_RS11095;Name=LPH41_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11095;old_locus_tag=LPH41_11095 NZ_CP087680.1 Protein Homology CDS 2649040 2649432 . + 0 ID=cds-WP_038273239.1;Parent=gene-LPH41_RS11095;Dbxref=Genbank:WP_038273239.1;Name=WP_038273239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086150.1;locus_tag=LPH41_RS11095;product=DUF596 domain-containing protein;protein_id=WP_038273239.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2649404 2649568 . + . ID=gene-LPH41_RS11100;Name=LPH41_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11100;old_locus_tag=LPH41_11100 NZ_CP087680.1 GeneMarkS-2+ CDS 2649404 2649568 . + 0 ID=cds-WP_160165238.1;Parent=gene-LPH41_RS11100;Dbxref=Genbank:WP_160165238.1;Name=WP_160165238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11100;product=hypothetical protein;protein_id=WP_160165238.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2649933 2651243 . + . ID=gene-LPH41_RS11105;Name=LPH41_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11105;old_locus_tag=LPH41_11105 NZ_CP087680.1 Protein Homology CDS 2649933 2651243 . + 0 ID=cds-WP_230428219.1;Parent=gene-LPH41_RS11105;Dbxref=Genbank:WP_230428219.1;Name=WP_230428219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382791.1;locus_tag=LPH41_RS11105;product=DUF769 domain-containing protein;protein_id=WP_230428219.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2651255 2651644 . + . ID=gene-LPH41_RS11110;Name=LPH41_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11110;old_locus_tag=LPH41_11110 NZ_CP087680.1 Protein Homology CDS 2651255 2651644 . + 0 ID=cds-WP_038273188.1;Parent=gene-LPH41_RS11110;Dbxref=Genbank:WP_038273188.1;Name=WP_038273188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH41_RS11110;product=DUF596 domain-containing protein;protein_id=WP_038273188.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2651803 2652117 . + . ID=gene-LPH41_RS11115;Name=LPH41_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11115;old_locus_tag=LPH41_11115 NZ_CP087680.1 GeneMarkS-2+ CDS 2651803 2652117 . + 0 ID=cds-WP_038273185.1;Parent=gene-LPH41_RS11115;Dbxref=Genbank:WP_038273185.1;Name=WP_038273185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11115;product=hypothetical protein;protein_id=WP_038273185.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2652114 2652662 . + . ID=gene-LPH41_RS11120;Name=LPH41_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11120;old_locus_tag=LPH41_11120 NZ_CP087680.1 GeneMarkS-2+ CDS 2652114 2652662 . + 0 ID=cds-WP_038273182.1;Parent=gene-LPH41_RS11120;Dbxref=Genbank:WP_038273182.1;Name=WP_038273182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11120;product=hypothetical protein;protein_id=WP_038273182.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2652814 2653947 . + . ID=gene-LPH41_RS11125;Name=LPH41_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11125;old_locus_tag=LPH41_11125 NZ_CP087680.1 Protein Homology CDS 2652814 2653947 . + 0 ID=cds-WP_114867139.1;Parent=gene-LPH41_RS11125;Dbxref=Genbank:WP_114867139.1;Name=WP_114867139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH41_RS11125;product=DUF769 domain-containing protein;protein_id=WP_114867139.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2653952 2654344 . + . ID=gene-LPH41_RS11130;Name=LPH41_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11130;old_locus_tag=LPH41_11130 NZ_CP087680.1 Protein Homology CDS 2653952 2654344 . + 0 ID=cds-WP_038273019.1;Parent=gene-LPH41_RS11130;Dbxref=Genbank:WP_038273019.1;Name=WP_038273019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH41_RS11130;product=DUF596 domain-containing protein;protein_id=WP_038273019.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2654316 2654471 . + . ID=gene-LPH41_RS11135;Name=LPH41_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11135;old_locus_tag=LPH41_11135 NZ_CP087680.1 GeneMarkS-2+ CDS 2654316 2654471 . + 0 ID=cds-WP_160165232.1;Parent=gene-LPH41_RS11135;Dbxref=Genbank:WP_160165232.1;Name=WP_160165232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11135;product=hypothetical protein;protein_id=WP_160165232.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2654545 2654841 . + . ID=gene-LPH41_RS11140;Name=LPH41_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11140;old_locus_tag=LPH41_11140 NZ_CP087680.1 Protein Homology CDS 2654545 2654841 . + 0 ID=cds-WP_268746656.1;Parent=gene-LPH41_RS11140;Dbxref=Genbank:WP_268746656.1;Name=WP_268746656.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS11140;product=DUF769 domain-containing protein;protein_id=WP_268746656.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2654853 2655215 . + . ID=gene-LPH41_RS11145;Name=LPH41_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11145;old_locus_tag=LPH41_11145 NZ_CP087680.1 Protein Homology CDS 2654853 2655215 . + 0 ID=cds-WP_051482393.1;Parent=gene-LPH41_RS11145;Dbxref=Genbank:WP_051482393.1;Name=WP_051482393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH41_RS11145;product=DUF596 domain-containing protein;protein_id=WP_051482393.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2655157 2655594 . + . ID=gene-LPH41_RS11150;Name=LPH41_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11150;old_locus_tag=LPH41_11150 NZ_CP087680.1 Protein Homology CDS 2655157 2655594 . + 0 ID=cds-WP_081755493.1;Parent=gene-LPH41_RS11150;Dbxref=Genbank:WP_081755493.1;Name=WP_081755493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH41_RS11150;product=DUF769 domain-containing protein;protein_id=WP_081755493.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2655606 2655989 . + . ID=gene-LPH41_RS11155;Name=LPH41_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11155;old_locus_tag=LPH41_11155 NZ_CP087680.1 Protein Homology CDS 2655606 2655989 . + 0 ID=cds-WP_038273048.1;Parent=gene-LPH41_RS11155;Dbxref=Genbank:WP_038273048.1;Name=WP_038273048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH41_RS11155;product=DUF596 domain-containing protein;protein_id=WP_038273048.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2655961 2656089 . + . ID=gene-LPH41_RS12075;Name=LPH41_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12075 NZ_CP087680.1 GeneMarkS-2+ CDS 2655961 2656089 . + 0 ID=cds-WP_267903151.1;Parent=gene-LPH41_RS12075;Dbxref=Genbank:WP_267903151.1;Name=WP_267903151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12075;product=hypothetical protein;protein_id=WP_267903151.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2656249 2656521 . + . ID=gene-LPH41_RS11160;Name=LPH41_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11160;old_locus_tag=LPH41_11160 NZ_CP087680.1 Protein Homology CDS 2656249 2656521 . + 0 ID=cds-WP_038273025.1;Parent=gene-LPH41_RS11160;Dbxref=Genbank:WP_038273025.1;Name=WP_038273025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337939.1;locus_tag=LPH41_RS11160;product=hypothetical protein;protein_id=WP_038273025.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2656526 2656906 . + . ID=gene-LPH41_RS11165;Name=LPH41_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11165;old_locus_tag=LPH41_11165 NZ_CP087680.1 Protein Homology CDS 2656526 2656906 . + 0 ID=cds-WP_038273027.1;Parent=gene-LPH41_RS11165;Dbxref=Genbank:WP_038273027.1;Name=WP_038273027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098380.1;locus_tag=LPH41_RS11165;product=DUF596 domain-containing protein;protein_id=WP_038273027.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2657026 2657271 . - . ID=gene-LPH41_RS11170;Name=LPH41_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11170;old_locus_tag=LPH41_11170 NZ_CP087680.1 GeneMarkS-2+ CDS 2657026 2657271 . - 0 ID=cds-WP_230428217.1;Parent=gene-LPH41_RS11170;Dbxref=Genbank:WP_230428217.1;Name=WP_230428217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11170;product=hypothetical protein;protein_id=WP_230428217.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2657283 2657606 . + . ID=gene-LPH41_RS11175;Name=LPH41_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11175;old_locus_tag=LPH41_11175 NZ_CP087680.1 GeneMarkS-2+ CDS 2657283 2657606 . + 0 ID=cds-WP_038273029.1;Parent=gene-LPH41_RS11175;Dbxref=Genbank:WP_038273029.1;Name=WP_038273029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11175;product=hypothetical protein;protein_id=WP_038273029.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2658014 2658622 . + . ID=gene-LPH41_RS11180;Name=LPH41_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11180;old_locus_tag=LPH41_11180 NZ_CP087680.1 Protein Homology CDS 2658014 2658622 . + 0 ID=cds-WP_038273050.1;Parent=gene-LPH41_RS11180;Dbxref=Genbank:WP_038273050.1;Name=WP_038273050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300253.1;locus_tag=LPH41_RS11180;product=rhomboid family intramembrane serine protease;protein_id=WP_038273050.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2659124 2660365 . - . ID=gene-LPH41_RS11185;Name=LPH41_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11185;old_locus_tag=LPH41_11185 NZ_CP087680.1 Protein Homology CDS 2659124 2660365 . - 0 ID=cds-WP_038273031.1;Parent=gene-LPH41_RS11185;Dbxref=Genbank:WP_038273031.1;Name=WP_038273031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894633.1;locus_tag=LPH41_RS11185;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_038273031.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2660362 2661477 . - . ID=gene-LPH41_RS11190;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LPH41_RS11190;old_locus_tag=LPH41_11190 NZ_CP087680.1 Protein Homology CDS 2660362 2661477 . - 0 ID=cds-WP_038273033.1;Parent=gene-LPH41_RS11190;Dbxref=Genbank:WP_038273033.1;Name=WP_038273033.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382650.1;locus_tag=LPH41_RS11190;product=lytic murein transglycosylase B;protein_id=WP_038273033.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2662113 2662241 . + . ID=gene-LPH41_RS12080;Name=LPH41_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12080 NZ_CP087680.1 GeneMarkS-2+ CDS 2662113 2662241 . + 0 ID=cds-WP_267903150.1;Parent=gene-LPH41_RS12080;Dbxref=Genbank:WP_267903150.1;Name=WP_267903150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12080;product=hypothetical protein;protein_id=WP_267903150.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2662279 2662452 . + . ID=gene-LPH41_RS11195;Name=LPH41_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11195;old_locus_tag=LPH41_11195 NZ_CP087680.1 Protein Homology CDS 2662279 2662452 . + 0 ID=cds-WP_114867137.1;Parent=gene-LPH41_RS11195;Dbxref=Genbank:WP_114867137.1;Name=WP_114867137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086144.1;locus_tag=LPH41_RS11195;product=DUF5668 domain-containing protein;protein_id=WP_114867137.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2662695 2663096 . - . ID=gene-LPH41_RS11200;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LPH41_RS11200;old_locus_tag=LPH41_11200 NZ_CP087680.1 Protein Homology CDS 2662695 2663096 . - 0 ID=cds-WP_038273036.1;Parent=gene-LPH41_RS11200;Dbxref=Genbank:WP_038273036.1;Name=WP_038273036.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607331.1;locus_tag=LPH41_RS11200;product=ribosome silencing factor;protein_id=WP_038273036.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2663149 2663817 . - . ID=gene-LPH41_RS11205;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LPH41_RS11205;old_locus_tag=LPH41_11205 NZ_CP087680.1 Protein Homology CDS 2663149 2663817 . - 0 ID=cds-WP_038273039.1;Parent=gene-LPH41_RS11205;Dbxref=Genbank:WP_038273039.1;Name=WP_038273039.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086142.1;locus_tag=LPH41_RS11205;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_038273039.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2663846 2664877 . - . ID=gene-LPH41_RS11210;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LPH41_RS11210;old_locus_tag=LPH41_11210 NZ_CP087680.1 Protein Homology CDS 2663846 2664877 . - 0 ID=cds-WP_114867136.1;Parent=gene-LPH41_RS11210;Dbxref=Genbank:WP_114867136.1;Name=WP_114867136.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116404.1;locus_tag=LPH41_RS11210;product=DNA polymerase III subunit delta;protein_id=WP_114867136.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2664888 2665490 . - . ID=gene-LPH41_RS11215;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LPH41_RS11215;old_locus_tag=LPH41_11215 NZ_CP087680.1 Protein Homology CDS 2664888 2665490 . - 0 ID=cds-WP_038272569.1;Parent=gene-LPH41_RS11215;Dbxref=Genbank:WP_038272569.1;Name=WP_038272569.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088585.1;locus_tag=LPH41_RS11215;product=LPS assembly lipoprotein LptE;protein_id=WP_038272569.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2665580 2668219 . - . ID=gene-LPH41_RS11220;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LPH41_RS11220;old_locus_tag=LPH41_11220 NZ_CP087680.1 Protein Homology CDS 2665580 2668219 . - 0 ID=cds-WP_038272610.1;Parent=gene-LPH41_RS11220;Dbxref=Genbank:WP_038272610.1;Name=WP_038272610.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183388.1;locus_tag=LPH41_RS11220;product=leucine--tRNA ligase;protein_id=WP_038272610.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2668303 2668908 . - . ID=gene-LPH41_RS11225;Name=LPH41_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11225;old_locus_tag=LPH41_11225 NZ_CP087680.1 Protein Homology CDS 2668303 2668908 . - 0 ID=cds-WP_038272571.1;Parent=gene-LPH41_RS11225;Dbxref=Genbank:WP_038272571.1;Name=WP_038272571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088593.1;locus_tag=LPH41_RS11225;product=DUF998 domain-containing protein;protein_id=WP_038272571.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2669084 2669944 . + . ID=gene-LPH41_RS11230;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LPH41_RS11230;old_locus_tag=LPH41_11230 NZ_CP087680.1 Protein Homology CDS 2669084 2669944 . + 0 ID=cds-WP_038272574.1;Parent=gene-LPH41_RS11230;Dbxref=Genbank:WP_038272574.1;Name=WP_038272574.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919399.1;locus_tag=LPH41_RS11230;product=thioredoxin;protein_id=WP_038272574.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2671598 2672134 . - . ID=gene-LPH41_RS11235;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LPH41_RS11235;old_locus_tag=LPH41_11235 NZ_CP087680.1 Protein Homology CDS 2671598 2672134 . - 0 ID=cds-WP_038272580.1;Parent=gene-LPH41_RS11235;Dbxref=Genbank:WP_038272580.1;Name=WP_038272580.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851369.1;locus_tag=LPH41_RS11235;product=inorganic diphosphatase;protein_id=WP_038272580.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2673800 2674414 . - . ID=gene-LPH41_RS11240;Name=LPH41_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11240;old_locus_tag=LPH41_11240 NZ_CP087680.1 Protein Homology CDS 2673800 2674414 . - 0 ID=cds-WP_038272582.1;Parent=gene-LPH41_RS11240;Dbxref=Genbank:WP_038272582.1;Name=WP_038272582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851370.1;locus_tag=LPH41_RS11240;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_038272582.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2674502 2676574 . - . ID=gene-LPH41_RS11245;Name=LPH41_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11245;old_locus_tag=LPH41_11245 NZ_CP087680.1 Protein Homology CDS 2674502 2676574 . - 0 ID=cds-WP_038272583.1;Parent=gene-LPH41_RS11245;Dbxref=Genbank:WP_038272583.1;Name=WP_038272583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237114.1;locus_tag=LPH41_RS11245;product=tetratricopeptide repeat protein;protein_id=WP_038272583.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2676631 2676957 . + . ID=gene-LPH41_RS11250;Name=LPH41_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11250;old_locus_tag=LPH41_11250 NZ_CP087680.1 GeneMarkS-2+ CDS 2676631 2676957 . + 0 ID=cds-WP_038272586.1;Parent=gene-LPH41_RS11250;Dbxref=Genbank:WP_038272586.1;Name=WP_038272586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11250;product=hypothetical protein;protein_id=WP_038272586.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2677201 2678091 . - . ID=gene-LPH41_RS11255;Name=LPH41_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11255;old_locus_tag=LPH41_11255 NZ_CP087680.1 Protein Homology CDS 2677201 2678091 . - 0 ID=cds-WP_114867135.1;Parent=gene-LPH41_RS11255;Dbxref=Genbank:WP_114867135.1;Name=WP_114867135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006367409.1;locus_tag=LPH41_RS11255;product=LysR family transcriptional regulator;protein_id=WP_114867135.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2678371 2679489 . + . ID=gene-LPH41_RS11260;Name=LPH41_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11260;old_locus_tag=LPH41_11260 NZ_CP087680.1 Protein Homology CDS 2678371 2679489 . + 0 ID=cds-WP_230428504.1;Parent=gene-LPH41_RS11260;Dbxref=Genbank:WP_230428504.1;Name=WP_230428504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019336814.1;locus_tag=LPH41_RS11260;product=MFS transporter;protein_id=WP_230428504.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2679658 2679849 . + . ID=gene-LPH41_RS11265;Name=LPH41_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11265;old_locus_tag=LPH41_11265 NZ_CP087680.1 GeneMarkS-2+ CDS 2679658 2679849 . + 0 ID=cds-WP_201745809.1;Parent=gene-LPH41_RS11265;Dbxref=Genbank:WP_201745809.1;Name=WP_201745809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11265;product=alpha/beta hydrolase;protein_id=WP_201745809.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2679922 2680074 . - . ID=gene-LPH41_RS11270;Name=LPH41_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11270;old_locus_tag=LPH41_11270 NZ_CP087680.1 GeneMarkS-2+ CDS 2679922 2680074 . - 0 ID=cds-WP_201745808.1;Parent=gene-LPH41_RS11270;Dbxref=Genbank:WP_201745808.1;Name=WP_201745808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11270;product=hypothetical protein;protein_id=WP_201745808.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2680319 2680480 . + . ID=gene-LPH41_RS11275;Name=LPH41_RS11275;end_range=2680480,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11275;old_locus_tag=LPH41_11275;partial=true;pseudo=true;start_range=.,2680319 NZ_CP087680.1 Protein Homology CDS 2680319 2680480 . + 0 ID=cds-LPH41_RS11275;Parent=gene-LPH41_RS11275;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2680480,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021138877.1;locus_tag=LPH41_RS11275;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,2680319;transl_table=11 NZ_CP087680.1 RefSeq gene 2681028 2683352 . - . ID=gene-LPH41_RS11280;Name=LPH41_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11280;old_locus_tag=LPH41_11280 NZ_CP087680.1 Protein Homology CDS 2681028 2683352 . - 0 ID=cds-WP_114867134.1;Parent=gene-LPH41_RS11280;Dbxref=Genbank:WP_114867134.1;Name=WP_114867134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851372.1;locus_tag=LPH41_RS11280;product=Tex family protein;protein_id=WP_114867134.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2683471 2683698 . - . ID=gene-LPH41_RS11285;Name=LPH41_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11285;old_locus_tag=LPH41_11285 NZ_CP087680.1 Protein Homology CDS 2683471 2683698 . - 0 ID=cds-WP_038272591.1;Parent=gene-LPH41_RS11285;Dbxref=Genbank:WP_038272591.1;Name=WP_038272591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157548.1;locus_tag=LPH41_RS11285;product=hypothetical protein;protein_id=WP_038272591.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2684557 2684778 . - . ID=gene-LPH41_RS11290;Name=LPH41_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11290;old_locus_tag=LPH41_11290 NZ_CP087680.1 Protein Homology CDS 2684557 2684778 . - 0 ID=cds-WP_038272593.1;Parent=gene-LPH41_RS11290;Dbxref=Genbank:WP_038272593.1;Name=WP_038272593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088612.1;locus_tag=LPH41_RS11290;product=EexN family lipoprotein;protein_id=WP_038272593.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2684798 2685088 . - . ID=gene-LPH41_RS11295;Name=LPH41_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11295;old_locus_tag=LPH41_11295 NZ_CP087680.1 GeneMarkS-2+ CDS 2684798 2685088 . - 0 ID=cds-WP_152536656.1;Parent=gene-LPH41_RS11295;Dbxref=Genbank:WP_152536656.1;Name=WP_152536656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11295;product=hypothetical protein;protein_id=WP_152536656.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2685437 2685808 . - . ID=gene-LPH41_RS11300;Name=LPH41_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11300;old_locus_tag=LPH41_11300 NZ_CP087680.1 Protein Homology CDS 2685437 2685808 . - 0 ID=cds-WP_230428215.1;Parent=gene-LPH41_RS11300;Dbxref=Genbank:WP_230428215.1;Name=WP_230428215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008208406.1;locus_tag=LPH41_RS11300;product=transcriptional regulator;protein_id=WP_230428215.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2685812 2686114 . - . ID=gene-LPH41_RS11305;Name=LPH41_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11305;old_locus_tag=LPH41_11305 NZ_CP087680.1 Protein Homology CDS 2685812 2686114 . - 0 ID=cds-WP_038272599.1;Parent=gene-LPH41_RS11305;Dbxref=Genbank:WP_038272599.1;Name=WP_038272599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574518.1;locus_tag=LPH41_RS11305;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_038272599.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2686324 2687157 . - . ID=gene-LPH41_RS11310;Name=LPH41_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11310;old_locus_tag=LPH41_11310 NZ_CP087680.1 Protein Homology CDS 2686324 2687157 . - 0 ID=cds-WP_200866213.1;Parent=gene-LPH41_RS11310;Dbxref=Genbank:WP_200866213.1;Name=WP_200866213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028088.2;locus_tag=LPH41_RS11310;product=tail fiber assembly protein;protein_id=WP_200866213.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2687154 2687660 . - . ID=gene-LPH41_RS11315;Name=LPH41_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11315;old_locus_tag=LPH41_11315 NZ_CP087680.1 GeneMarkS-2+ CDS 2687154 2687660 . - 0 ID=cds-WP_038272601.1;Parent=gene-LPH41_RS11315;Dbxref=Genbank:WP_038272601.1;Name=WP_038272601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11315;product=hypothetical protein;protein_id=WP_038272601.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2687653 2688186 . - . ID=gene-LPH41_RS11320;Name=LPH41_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11320;old_locus_tag=LPH41_11320 NZ_CP087680.1 GeneMarkS-2+ CDS 2687653 2688186 . - 0 ID=cds-WP_051482374.1;Parent=gene-LPH41_RS11320;Dbxref=Genbank:WP_051482374.1;Name=WP_051482374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11320;product=glycosyltransferase family A protein;protein_id=WP_051482374.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2688191 2688406 . - . ID=gene-LPH41_RS11325;Name=LPH41_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11325;old_locus_tag=LPH41_11325 NZ_CP087680.1 Protein Homology CDS 2688191 2688406 . - 0 ID=cds-WP_038272603.1;Parent=gene-LPH41_RS11325;Dbxref=Genbank:WP_038272603.1;Name=WP_038272603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085111.1;locus_tag=LPH41_RS11325;product=hypothetical protein;protein_id=WP_038272603.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2688408 2688869 . - . ID=gene-LPH41_RS11330;Name=LPH41_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11330;old_locus_tag=LPH41_11330 NZ_CP087680.1 Protein Homology CDS 2688408 2688869 . - 0 ID=cds-WP_038272730.1-2;Parent=gene-LPH41_RS11330;Dbxref=Genbank:WP_038272730.1;Name=WP_038272730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086887.1;locus_tag=LPH41_RS11330;product=hypothetical protein;protein_id=WP_038272730.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2688859 2689185 . - . ID=gene-LPH41_RS11335;Name=LPH41_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11335;old_locus_tag=LPH41_11335 NZ_CP087680.1 Protein Homology CDS 2688859 2689185 . - 0 ID=cds-WP_038272608.1;Parent=gene-LPH41_RS11335;Dbxref=Genbank:WP_038272608.1;Name=WP_038272608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852373.1;locus_tag=LPH41_RS11335;product=phage holin family protein;protein_id=WP_038272608.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2689178 2689687 . - . ID=gene-LPH41_RS11340;Name=LPH41_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11340;old_locus_tag=LPH41_11340 NZ_CP087680.1 Protein Homology CDS 2689178 2689687 . - 0 ID=cds-WP_114867133.1;Parent=gene-LPH41_RS11340;Dbxref=Genbank:WP_114867133.1;Name=WP_114867133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894761.1;locus_tag=LPH41_RS11340;product=lysozyme;protein_id=WP_114867133.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2689879 2690355 . - . ID=gene-LPH41_RS11345;Name=LPH41_RS11345;end_range=2690355,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11345;old_locus_tag=LPH41_11345;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 2689879 2690355 . - 0 ID=cds-LPH41_RS11345;Parent=gene-LPH41_RS11345;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2690355,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090827.1;locus_tag=LPH41_RS11345;partial=true;product=BRO family protein;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq gene 2691453 2693981 . + . ID=gene-LPH41_RS11350;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LPH41_RS11350;old_locus_tag=LPH41_11350 NZ_CP087680.1 Protein Homology CDS 2691453 2693981 . + 0 ID=cds-WP_038272997.1;Parent=gene-LPH41_RS11350;Dbxref=Genbank:WP_038272997.1;Name=WP_038272997.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851070.1;locus_tag=LPH41_RS11350;product=ribonuclease R;protein_id=WP_038272997.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2694365 2695114 . + . ID=gene-LPH41_RS11355;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LPH41_RS11355;old_locus_tag=LPH41_11355 NZ_CP087680.1 Protein Homology CDS 2694365 2695114 . + 0 ID=cds-WP_038273001.1;Parent=gene-LPH41_RS11355;Dbxref=Genbank:WP_038273001.1;Name=WP_038273001.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894443.1;locus_tag=LPH41_RS11355;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_038273001.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2696165 2696743 . - . ID=gene-LPH41_RS11360;Name=LPH41_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11360;old_locus_tag=LPH41_11360 NZ_CP087680.1 Protein Homology CDS 2696165 2696743 . - 0 ID=cds-WP_038273004.1;Parent=gene-LPH41_RS11360;Dbxref=Genbank:WP_038273004.1;Name=WP_038273004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091135.1;locus_tag=LPH41_RS11360;product=gamma carbonic anhydrase family protein;protein_id=WP_038273004.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2697414 2698016 . - . ID=gene-LPH41_RS11365;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LPH41_RS11365;old_locus_tag=LPH41_11365 NZ_CP087680.1 Protein Homology CDS 2697414 2698016 . - 0 ID=cds-WP_038273009.1;Parent=gene-LPH41_RS11365;Dbxref=Genbank:WP_038273009.1;Name=WP_038273009.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158364.1;locus_tag=LPH41_RS11365;product=GTP cyclohydrolase I FolE;protein_id=WP_038273009.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2699094 2702744 . + . ID=gene-LPH41_RS11370;Name=LPH41_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11370;old_locus_tag=LPH41_11370 NZ_CP087680.1 Protein Homology CDS 2699094 2702744 . + 0 ID=cds-WP_114867132.1;Parent=gene-LPH41_RS11370;Dbxref=Genbank:WP_114867132.1;Name=WP_114867132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337810.1;locus_tag=LPH41_RS11370;product=YadA-like family protein;protein_id=WP_114867132.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2703769 2704662 . + . ID=gene-LPH41_RS11375;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=LPH41_RS11375;old_locus_tag=LPH41_11375 NZ_CP087680.1 Protein Homology CDS 2703769 2704662 . + 0 ID=cds-WP_038271558.1;Parent=gene-LPH41_RS11375;Dbxref=Genbank:WP_038271558.1;Name=WP_038271558.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337811.1;locus_tag=LPH41_RS11375;product=regulatory signaling modulator protein AmpE;protein_id=WP_038271558.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2704986 2705303 . + . ID=gene-LPH41_RS11380;Name=LPH41_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11380;old_locus_tag=LPH41_11380 NZ_CP087680.1 Protein Homology CDS 2704986 2705303 . + 0 ID=cds-WP_051482342.1;Parent=gene-LPH41_RS11380;Dbxref=Genbank:WP_051482342.1;Name=WP_051482342.1;Ontology_term=GO:0009307,GO:0009036;gbkey=CDS;go_function=type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF020757.2;locus_tag=LPH41_RS11380;product=BglII/BstYI family type II restriction endonuclease;protein_id=WP_051482342.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2706376 2708505 . - . ID=gene-LPH41_RS11385;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=LPH41_RS11385;old_locus_tag=LPH41_11385 NZ_CP087680.1 Protein Homology CDS 2706376 2708505 . - 0 ID=cds-WP_230428288.1;Parent=gene-LPH41_RS11385;Dbxref=Genbank:WP_230428288.1;Name=WP_230428288.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607717.1;locus_tag=LPH41_RS11385;product=YccS family putative transporter;protein_id=WP_230428288.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2708592 2709179 . - . ID=gene-LPH41_RS11390;Name=LPH41_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11390;old_locus_tag=LPH41_11390 NZ_CP087680.1 GeneMarkS-2+ CDS 2708592 2709179 . - 0 ID=cds-WP_152536631.1;Parent=gene-LPH41_RS11390;Dbxref=Genbank:WP_152536631.1;Name=WP_152536631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11390;product=hypothetical protein;protein_id=WP_152536631.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2709176 2709952 . - . ID=gene-LPH41_RS11395;Name=LPH41_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11395;old_locus_tag=LPH41_11395 NZ_CP087680.1 GeneMarkS-2+ CDS 2709176 2709952 . - 0 ID=cds-WP_152536632.1;Parent=gene-LPH41_RS11395;Dbxref=Genbank:WP_152536632.1;Name=WP_152536632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11395;product=hypothetical protein;protein_id=WP_152536632.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2710010 2710138 . + . ID=gene-LPH41_RS12085;Name=LPH41_RS12085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS12085 NZ_CP087680.1 GeneMarkS-2+ CDS 2710010 2710138 . + 0 ID=cds-WP_267903149.1;Parent=gene-LPH41_RS12085;Dbxref=Genbank:WP_267903149.1;Name=WP_267903149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS12085;product=hypothetical protein;protein_id=WP_267903149.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2710258 2710488 . + . ID=gene-LPH41_RS11400;Name=LPH41_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11400;old_locus_tag=LPH41_11400 NZ_CP087680.1 GeneMarkS-2+ CDS 2710258 2710488 . + 0 ID=cds-WP_152536633.1;Parent=gene-LPH41_RS11400;Dbxref=Genbank:WP_152536633.1;Name=WP_152536633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11400;product=hypothetical protein;protein_id=WP_152536633.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2710590 2711879 . - . ID=gene-LPH41_RS11405;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LPH41_RS11405;old_locus_tag=LPH41_11405 NZ_CP087680.1 Protein Homology CDS 2710590 2711879 . - 0 ID=cds-WP_038271566.1;Parent=gene-LPH41_RS11405;Dbxref=Genbank:WP_038271566.1;Name=WP_038271566.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346194.1;locus_tag=LPH41_RS11405;product=phosphoribosylamine--glycine ligase;protein_id=WP_038271566.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2712777 2714360 . - . ID=gene-LPH41_RS11410;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LPH41_RS11410;old_locus_tag=LPH41_11410 NZ_CP087680.1 Protein Homology CDS 2712777 2714360 . - 0 ID=cds-WP_038271569.1;Parent=gene-LPH41_RS11410;Dbxref=Genbank:WP_038271569.1;Name=WP_038271569.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302295.1;locus_tag=LPH41_RS11410;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_038271569.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2715117 2715398 . + . ID=gene-LPH41_RS11415;Name=LPH41_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11415;old_locus_tag=LPH41_11415 NZ_CP087680.1 GeneMarkS-2+ CDS 2715117 2715398 . + 0 ID=cds-WP_152536634.1;Parent=gene-LPH41_RS11415;Dbxref=Genbank:WP_152536634.1;Name=WP_152536634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11415;product=hypothetical protein;protein_id=WP_152536634.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2715590 2716090 . - . ID=gene-LPH41_RS11420;Name=LPH41_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11420;old_locus_tag=LPH41_11420 NZ_CP087680.1 Protein Homology CDS 2715590 2716090 . - 0 ID=cds-WP_038271638.1;Parent=gene-LPH41_RS11420;Dbxref=Genbank:WP_038271638.1;Name=WP_038271638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085473.1;locus_tag=LPH41_RS11420;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_038271638.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2716367 2716687 . + . ID=gene-LPH41_RS11425;Name=LPH41_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11425;old_locus_tag=LPH41_11425 NZ_CP087680.1 Protein Homology CDS 2716367 2716687 . + 0 ID=cds-WP_038271574.1;Parent=gene-LPH41_RS11425;Dbxref=Genbank:WP_038271574.1;Name=WP_038271574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488921.1;locus_tag=LPH41_RS11425;product=DUF4156 domain-containing protein;protein_id=WP_038271574.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2716794 2717810 . + . ID=gene-LPH41_RS11430;Name=LPH41_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11430;old_locus_tag=LPH41_11430 NZ_CP087680.1 Protein Homology CDS 2716794 2717810 . + 0 ID=cds-WP_038271575.1;Parent=gene-LPH41_RS11430;Dbxref=Genbank:WP_038271575.1;Name=WP_038271575.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809874.1;locus_tag=LPH41_RS11430;product=3-oxoacyl-ACP synthase III;protein_id=WP_038271575.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2717846 2718772 . + . ID=gene-LPH41_RS11435;Name=LPH41_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11435;old_locus_tag=LPH41_11435 NZ_CP087680.1 GeneMarkS-2+ CDS 2717846 2718772 . + 0 ID=cds-WP_230428214.1;Parent=gene-LPH41_RS11435;Dbxref=Genbank:WP_230428214.1;Name=WP_230428214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11435;product=hypothetical protein;protein_id=WP_230428214.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2718769 2719680 . + . ID=gene-LPH41_RS11440;Name=LPH41_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11440;old_locus_tag=LPH41_11440 NZ_CP087680.1 Protein Homology CDS 2718769 2719680 . + 0 ID=cds-WP_038271576.1;Parent=gene-LPH41_RS11440;Dbxref=Genbank:WP_038271576.1;Name=WP_038271576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572841.1;locus_tag=LPH41_RS11440;product=alpha/beta fold hydrolase;protein_id=WP_038271576.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2719902 2720123 . + . ID=gene-LPH41_RS11445;Name=LPH41_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11445;old_locus_tag=LPH41_11445 NZ_CP087680.1 GeneMarkS-2+ CDS 2719902 2720123 . + 0 ID=cds-WP_152536635.1;Parent=gene-LPH41_RS11445;Dbxref=Genbank:WP_152536635.1;Name=WP_152536635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11445;product=hypothetical protein;protein_id=WP_152536635.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2720322 2720705 . - . ID=gene-LPH41_RS11450;Name=LPH41_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11450;old_locus_tag=LPH41_11450 NZ_CP087680.1 Protein Homology CDS 2720322 2720705 . - 0 ID=cds-WP_038271578.1;Parent=gene-LPH41_RS11450;Dbxref=Genbank:WP_038271578.1;Name=WP_038271578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894423.1;locus_tag=LPH41_RS11450;product=YkgJ family cysteine cluster protein;protein_id=WP_038271578.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2720881 2721036 . + . ID=gene-LPH41_RS11455;Name=LPH41_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11455;old_locus_tag=LPH41_11455 NZ_CP087680.1 GeneMarkS-2+ CDS 2720881 2721036 . + 0 ID=cds-WP_160165192.1;Parent=gene-LPH41_RS11455;Dbxref=Genbank:WP_160165192.1;Name=WP_160165192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11455;product=hypothetical protein;protein_id=WP_160165192.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2721190 2721528 . + . ID=gene-LPH41_RS11460;Name=LPH41_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11460;old_locus_tag=LPH41_11460 NZ_CP087680.1 GeneMarkS-2+ CDS 2721190 2721528 . + 0 ID=cds-WP_152536637.1;Parent=gene-LPH41_RS11460;Dbxref=Genbank:WP_152536637.1;Name=WP_152536637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11460;product=hypothetical protein;protein_id=WP_152536637.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2721473 2721892 . + . ID=gene-LPH41_RS11465;Name=LPH41_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11465;old_locus_tag=LPH41_11465 NZ_CP087680.1 GeneMarkS-2+ CDS 2721473 2721892 . + 0 ID=cds-WP_152536638.1;Parent=gene-LPH41_RS11465;Dbxref=Genbank:WP_152536638.1;Name=WP_152536638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11465;product=hypothetical protein;protein_id=WP_152536638.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2722438 2724075 . + . ID=gene-LPH41_RS11470;Name=LPH41_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11470;old_locus_tag=LPH41_11470 NZ_CP087680.1 Protein Homology CDS 2722438 2724075 . + 0 ID=cds-WP_038271579.1;Parent=gene-LPH41_RS11470;Dbxref=Genbank:WP_038271579.1;Name=WP_038271579.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337819.1;locus_tag=LPH41_RS11470;product=NAD+ synthase;protein_id=WP_038271579.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2724412 2725335 . + . ID=gene-LPH41_RS11475;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LPH41_RS11475;old_locus_tag=LPH41_11475 NZ_CP087680.1 Protein Homology CDS 2724412 2725335 . + 0 ID=cds-WP_038271580.1;Parent=gene-LPH41_RS11475;Dbxref=Genbank:WP_038271580.1;Name=WP_038271580.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156064.1;locus_tag=LPH41_RS11475;product=glycine--tRNA ligase subunit alpha;protein_id=WP_038271580.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2725426 2727582 . + . ID=gene-LPH41_RS11480;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LPH41_RS11480;old_locus_tag=LPH41_11480 NZ_CP087680.1 Protein Homology CDS 2725426 2727582 . + 0 ID=cds-WP_038271582.1;Parent=gene-LPH41_RS11480;Dbxref=Genbank:WP_038271582.1;Name=WP_038271582.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039155.1;locus_tag=LPH41_RS11480;product=glycine--tRNA ligase subunit beta;protein_id=WP_038271582.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2728394 2729101 . - . ID=gene-LPH41_RS11485;Name=LPH41_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11485;old_locus_tag=LPH41_11485 NZ_CP087680.1 Protein Homology CDS 2728394 2729101 . - 0 ID=cds-WP_230439291.1;Parent=gene-LPH41_RS11485;Dbxref=Genbank:WP_230439291.1;Name=WP_230439291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040027.1;locus_tag=LPH41_RS11485;product=DUF6216 family protein;protein_id=WP_230439291.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2729485 2730360 . - . ID=gene-LPH41_RS11490;Name=LPH41_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11490;old_locus_tag=LPH41_11490 NZ_CP087680.1 Protein Homology CDS 2729485 2730360 . - 0 ID=cds-WP_038271586.1;Parent=gene-LPH41_RS11490;Dbxref=Genbank:WP_038271586.1;Name=WP_038271586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382557.1;locus_tag=LPH41_RS11490;product=energy transducer TonB;protein_id=WP_038271586.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2730362 2731306 . - . ID=gene-LPH41_RS11495;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LPH41_RS11495;old_locus_tag=LPH41_11495 NZ_CP087680.1 Protein Homology CDS 2730362 2731306 . - 0 ID=cds-WP_038271589.1;Parent=gene-LPH41_RS11495;Dbxref=Genbank:WP_038271589.1;Name=WP_038271589.1;Ontology_term=GO:0006750,GO:0004363;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894415.1;locus_tag=LPH41_RS11495;product=glutathione synthase;protein_id=WP_038271589.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2731576 2731992 . + . ID=gene-LPH41_RS11500;Name=LPH41_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11500;old_locus_tag=LPH41_11500 NZ_CP087680.1 Protein Homology CDS 2731576 2731992 . + 0 ID=cds-WP_038271642.1;Parent=gene-LPH41_RS11500;Dbxref=Genbank:WP_038271642.1;Name=WP_038271642.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085459.1;locus_tag=LPH41_RS11500;product=response regulator;protein_id=WP_038271642.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2732009 2732539 . + . ID=gene-LPH41_RS11505;Name=LPH41_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11505;old_locus_tag=LPH41_11505 NZ_CP087680.1 Protein Homology CDS 2732009 2732539 . + 0 ID=cds-WP_038271592.1;Parent=gene-LPH41_RS11505;Dbxref=Genbank:WP_038271592.1;Name=WP_038271592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508568.1;locus_tag=LPH41_RS11505;product=chemotaxis protein CheW;protein_id=WP_038271592.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2732579 2734621 . + . ID=gene-LPH41_RS11510;Name=LPH41_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11510;old_locus_tag=LPH41_11510 NZ_CP087680.1 Protein Homology CDS 2732579 2734621 . + 0 ID=cds-WP_038271594.1;Parent=gene-LPH41_RS11510;Dbxref=Genbank:WP_038271594.1;Name=WP_038271594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988635.1;locus_tag=LPH41_RS11510;product=methyl-accepting chemotaxis protein;protein_id=WP_038271594.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2734728 2739986 . + . ID=gene-LPH41_RS11515;Name=LPH41_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11515;old_locus_tag=LPH41_11515 NZ_CP087680.1 Protein Homology CDS 2734728 2739986 . + 0 ID=cds-WP_038271596.1;Parent=gene-LPH41_RS11515;Dbxref=Genbank:WP_038271596.1;Name=WP_038271596.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572849.1;locus_tag=LPH41_RS11515;product=Hpt domain-containing protein;protein_id=WP_038271596.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2739973 2741178 . + . ID=gene-LPH41_RS11520;Name=LPH41_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11520;old_locus_tag=LPH41_11520 NZ_CP087680.1 Protein Homology CDS 2739973 2741178 . + 0 ID=cds-WP_038271598.1;Parent=gene-LPH41_RS11520;Dbxref=Genbank:WP_038271598.1;Name=WP_038271598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852974.1;locus_tag=LPH41_RS11520;product=glutamate methyltransferase;protein_id=WP_038271598.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2741200 2741712 . + . ID=gene-LPH41_RS11525;Name=LPH41_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11525;old_locus_tag=LPH41_11525 NZ_CP087680.1 Protein Homology CDS 2741200 2741712 . + 0 ID=cds-WP_051482345.1;Parent=gene-LPH41_RS11525;Dbxref=Genbank:WP_051482345.1;Name=WP_051482345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085454.1;locus_tag=LPH41_RS11525;product=chemotaxis protein CheW;protein_id=WP_051482345.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2742439 2743896 . - . ID=gene-LPH41_RS11530;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LPH41_RS11530;old_locus_tag=LPH41_11530 NZ_CP087680.1 Protein Homology CDS 2742439 2743896 . - 0 ID=cds-WP_038271601.1;Parent=gene-LPH41_RS11530;Dbxref=Genbank:WP_038271601.1;Name=WP_038271601.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085453.1;locus_tag=LPH41_RS11530;product=amidophosphoribosyltransferase;protein_id=WP_038271601.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2744039 2744572 . - . ID=gene-LPH41_RS11535;Name=LPH41_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11535;old_locus_tag=LPH41_11535 NZ_CP087680.1 Protein Homology CDS 2744039 2744572 . - 0 ID=cds-WP_081755458.1;Parent=gene-LPH41_RS11535;Dbxref=Genbank:WP_081755458.1;Name=WP_081755458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894410.1;locus_tag=LPH41_RS11535;product=CvpA family protein;protein_id=WP_081755458.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2744649 2745653 . - . ID=gene-LPH41_RS11540;Name=LPH41_RS11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11540;old_locus_tag=LPH41_11540 NZ_CP087680.1 Protein Homology CDS 2744649 2745653 . - 0 ID=cds-WP_038271603.1;Parent=gene-LPH41_RS11540;Dbxref=Genbank:WP_038271603.1;Name=WP_038271603.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301876.1;locus_tag=LPH41_RS11540;product=SPOR domain-containing protein;protein_id=WP_038271603.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2745692 2746990 . - . ID=gene-LPH41_RS11545;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LPH41_RS11545;old_locus_tag=LPH41_11545 NZ_CP087680.1 Protein Homology CDS 2745692 2746990 . - 0 ID=cds-WP_038271605.1;Parent=gene-LPH41_RS11545;Dbxref=Genbank:WP_038271605.1;Name=WP_038271605.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085450.1;locus_tag=LPH41_RS11545;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_038271605.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2748025 2748432 . + . ID=gene-LPH41_RS11550;Name=LPH41_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11550;old_locus_tag=LPH41_11550 NZ_CP087680.1 Protein Homology CDS 2748025 2748432 . + 0 ID=cds-WP_230428287.1;Parent=gene-LPH41_RS11550;Dbxref=Genbank:WP_230428287.1;Name=WP_230428287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894407.1;locus_tag=LPH41_RS11550;product=VirK family protein;protein_id=WP_230428287.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2748518 2750677 . - . ID=gene-LPH41_RS11555;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=LPH41_RS11555;old_locus_tag=LPH41_11555 NZ_CP087680.1 Protein Homology CDS 2748518 2750677 . - 0 ID=cds-WP_038271650.1;Parent=gene-LPH41_RS11555;Dbxref=Genbank:WP_038271650.1;Name=WP_038271650.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008266515.1;locus_tag=LPH41_RS11555;product=peptidyl-dipeptidase Dcp;protein_id=WP_038271650.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2752074 2752466 . - . ID=gene-LPH41_RS11560;Name=LPH41_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11560;old_locus_tag=LPH41_11560 NZ_CP087680.1 Protein Homology CDS 2752074 2752466 . - 0 ID=cds-WP_038271652.1;Parent=gene-LPH41_RS11560;Dbxref=Genbank:WP_038271652.1;Name=WP_038271652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502532.1;locus_tag=LPH41_RS11560;product=HU family DNA-binding protein;protein_id=WP_038271652.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2753930 2754424 . + . ID=gene-LPH41_RS11565;Name=LPH41_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11565;old_locus_tag=LPH41_11565 NZ_CP087680.1 Protein Homology CDS 2753930 2754424 . + 0 ID=cds-WP_038271655.1;Parent=gene-LPH41_RS11565;Dbxref=Genbank:WP_038271655.1;Name=WP_038271655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085447.1;locus_tag=LPH41_RS11565;product=SgcJ/EcaC family oxidoreductase;protein_id=WP_038271655.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2754537 2755187 . + . ID=gene-LPH41_RS11570;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LPH41_RS11570;old_locus_tag=LPH41_11570 NZ_CP087680.1 Protein Homology CDS 2754537 2755187 . + 0 ID=cds-WP_038271658.1;Parent=gene-LPH41_RS11570;Dbxref=Genbank:WP_038271658.1;Name=WP_038271658.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009577520.1;locus_tag=LPH41_RS11570;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_038271658.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2755322 2755426 . - . ID=gene-LPH41_RS11575;Name=LPH41_RS11575;end_range=2755426,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11575;old_locus_tag=LPH41_11575;partial=true;pseudo=true;start_range=.,2755322 NZ_CP087680.1 Protein Homology CDS 2755322 2755426 . - 0 ID=cds-LPH41_RS11575;Parent=gene-LPH41_RS11575;Note=maintains the balance of metabolites in the pentose-phosphate pathway%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2755426,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012479209.1;locus_tag=LPH41_RS11575;partial=true;product=transaldolase;pseudo=true;start_range=.,2755322;transl_table=11 NZ_CP087680.1 RefSeq gene 2755691 2756971 . + . ID=gene-LPH41_RS11580;Name=LPH41_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11580;old_locus_tag=LPH41_11580 NZ_CP087680.1 Protein Homology CDS 2755691 2756971 . + 0 ID=cds-WP_081755459.1;Parent=gene-LPH41_RS11580;Dbxref=Genbank:WP_081755459.1;Name=WP_081755459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851384.1;locus_tag=LPH41_RS11580;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_081755459.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2757077 2759077 . + . ID=gene-LPH41_RS11585;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LPH41_RS11585;old_locus_tag=LPH41_11585 NZ_CP087680.1 Protein Homology CDS 2757077 2759077 . + 0 ID=cds-WP_038271614.1;Parent=gene-LPH41_RS11585;Dbxref=Genbank:WP_038271614.1;Name=WP_038271614.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348449.1;locus_tag=LPH41_RS11585;product=transketolase;protein_id=WP_038271614.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2759148 2759786 . - . ID=gene-LPH41_RS11590;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LPH41_RS11590;old_locus_tag=LPH41_11590 NZ_CP087680.1 Protein Homology CDS 2759148 2759786 . - 0 ID=cds-WP_038271616.1;Parent=gene-LPH41_RS11590;Dbxref=Genbank:WP_038271616.1;Name=WP_038271616.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914596.1;locus_tag=LPH41_RS11590;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_038271616.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2759998 2760606 . - . ID=gene-LPH41_RS11595;Name=LPH41_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11595;old_locus_tag=LPH41_11595 NZ_CP087680.1 Protein Homology CDS 2759998 2760606 . - 0 ID=cds-WP_038271618.1;Parent=gene-LPH41_RS11595;Dbxref=Genbank:WP_038271618.1;Name=WP_038271618.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972828.1;locus_tag=LPH41_RS11595;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_038271618.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2760937 2761716 . - . ID=gene-LPH41_RS11600;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LPH41_RS11600;old_locus_tag=LPH41_11600 NZ_CP087680.1 Protein Homology CDS 2760937 2761716 . - 0 ID=cds-WP_038271660.1;Parent=gene-LPH41_RS11600;Dbxref=Genbank:WP_038271660.1;Name=WP_038271660.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901808.1;locus_tag=LPH41_RS11600;product=exodeoxyribonuclease III;protein_id=WP_038271660.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2762237 2762464 . - . ID=gene-LPH41_RS11605;Name=LPH41_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11605;old_locus_tag=LPH41_11605 NZ_CP087680.1 GeneMarkS-2+ CDS 2762237 2762464 . - 0 ID=cds-WP_152536639.1;Parent=gene-LPH41_RS11605;Dbxref=Genbank:WP_152536639.1;Name=WP_152536639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11605;product=hypothetical protein;protein_id=WP_152536639.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2763298 2764881 . + . ID=gene-LPH41_RS11610;Name=LPH41_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11610;old_locus_tag=LPH41_11610 NZ_CP087680.1 Protein Homology CDS 2763298 2764881 . + 0 ID=cds-WP_038271621.1;Parent=gene-LPH41_RS11610;Dbxref=Genbank:WP_038271621.1;Name=WP_038271621.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085579.1;locus_tag=LPH41_RS11610;product=S41 family peptidase;protein_id=WP_038271621.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2765947 2766192 . + . ID=gene-LPH41_RS11615;Name=LPH41_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11615;old_locus_tag=LPH41_11615 NZ_CP087680.1 GeneMarkS-2+ CDS 2765947 2766192 . + 0 ID=cds-WP_038271623.1;Parent=gene-LPH41_RS11615;Dbxref=Genbank:WP_038271623.1;Name=WP_038271623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11615;product=hypothetical protein;protein_id=WP_038271623.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2766203 2767720 . + . ID=gene-LPH41_RS11620;Name=LPH41_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11620;old_locus_tag=LPH41_11620 NZ_CP087680.1 Protein Homology CDS 2766203 2767720 . + 0 ID=cds-WP_038271625.1;Parent=gene-LPH41_RS11620;Dbxref=Genbank:WP_038271625.1;Name=WP_038271625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483539.1;locus_tag=LPH41_RS11620;product=fumarate hydratase;protein_id=WP_038271625.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2767764 2768943 . - . ID=gene-LPH41_RS11625;Name=LPH41_RS11625;end_range=2768943,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11625;old_locus_tag=LPH41_11625;partial=true;pseudo=true NZ_CP087680.1 Protein Homology CDS 2767764 2768943 . - 0 ID=cds-LPH41_RS11625;Parent=gene-LPH41_RS11625;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=2768943,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=LPH41_RS11625;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2768970 2769262 . - . ID=gene-LPH41_RS11630;Name=LPH41_RS11630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11630;old_locus_tag=LPH41_11630;partial=true;pseudo=true;start_range=.,2768970 NZ_CP087680.1 Protein Homology CDS 2768970 2769262 . - 0 ID=cds-LPH41_RS11630;Parent=gene-LPH41_RS11630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015648284.1;locus_tag=LPH41_RS11630;partial=true;product=recombinase family protein;pseudo=true;start_range=.,2768970;transl_table=11 NZ_CP087680.1 RefSeq gene 2769407 2770234 . + . ID=gene-LPH41_RS11635;Name=LPH41_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11635;old_locus_tag=LPH41_11635 NZ_CP087680.1 Protein Homology CDS 2769407 2770234 . + 0 ID=cds-WP_038271629.1;Parent=gene-LPH41_RS11635;Dbxref=Genbank:WP_038271629.1;Name=WP_038271629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005395.0;locus_tag=LPH41_RS11635;product=SDR family oxidoreductase;protein_id=WP_038271629.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2770556 2772325 . - . ID=gene-LPH41_RS11640;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LPH41_RS11640;old_locus_tag=LPH41_11640 NZ_CP087680.1 Protein Homology CDS 2770556 2772325 . - 0 ID=cds-WP_038271663.1;Parent=gene-LPH41_RS11640;Dbxref=Genbank:WP_038271663.1;Name=WP_038271663.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089732.1;locus_tag=LPH41_RS11640;product=aspartate--tRNA ligase;protein_id=WP_038271663.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2773180 2773848 . + . ID=gene-LPH41_RS11645;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LPH41_RS11645;old_locus_tag=LPH41_11645 NZ_CP087680.1 Protein Homology CDS 2773180 2773848 . + 0 ID=cds-WP_038271631.1;Parent=gene-LPH41_RS11645;Dbxref=Genbank:WP_038271631.1;Name=WP_038271631.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894324.1;locus_tag=LPH41_RS11645;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_038271631.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2773921 2773996 . + . ID=gene-LPH41_RS11650;Name=LPH41_RS11650;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH41_RS11650;old_locus_tag=LPH41_11650 NZ_CP087680.1 tRNAscan-SE tRNA 2773921 2773996 . + . ID=rna-LPH41_RS11650;Parent=gene-LPH41_RS11650;anticodon=(pos:2773954..2773956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS11650;product=tRNA-Lys NZ_CP087680.1 tRNAscan-SE exon 2773921 2773996 . + . ID=exon-LPH41_RS11650-1;Parent=rna-LPH41_RS11650;anticodon=(pos:2773954..2773956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH41_RS11650;product=tRNA-Lys NZ_CP087680.1 RefSeq gene 2774495 2774719 . + . ID=gene-LPH41_RS11655;Name=LPH41_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11655;old_locus_tag=LPH41_11655 NZ_CP087680.1 GeneMarkS-2+ CDS 2774495 2774719 . + 0 ID=cds-WP_160199341.1;Parent=gene-LPH41_RS11655;Dbxref=Genbank:WP_160199341.1;Name=WP_160199341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11655;product=hypothetical protein;protein_id=WP_160199341.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2774750 2774932 . + . ID=gene-LPH41_RS11660;Name=LPH41_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11660;old_locus_tag=LPH41_11660 NZ_CP087680.1 Protein Homology CDS 2774750 2774932 . + 0 ID=cds-WP_114867130.1;Parent=gene-LPH41_RS11660;Dbxref=Genbank:WP_114867130.1;Name=WP_114867130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH41_RS11660;product=hypothetical protein;protein_id=WP_114867130.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2775363 2776511 . + . ID=gene-LPH41_RS11665;Name=LPH41_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11665;old_locus_tag=LPH41_11665 NZ_CP087680.1 Protein Homology CDS 2775363 2776511 . + 0 ID=cds-WP_038273097.1-2;Parent=gene-LPH41_RS11665;Dbxref=Genbank:WP_038273097.1;Name=WP_038273097.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853102.1;locus_tag=LPH41_RS11665;product=replication initiation factor domain-containing protein;protein_id=WP_038273097.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2776557 2776850 . + . ID=gene-LPH41_RS11670;Name=LPH41_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11670;old_locus_tag=LPH41_11670 NZ_CP087680.1 Protein Homology CDS 2776557 2776850 . + 0 ID=cds-WP_038273093.1-2;Parent=gene-LPH41_RS11670;Dbxref=Genbank:WP_038273093.1;Name=WP_038273093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097860.1;locus_tag=LPH41_RS11670;product=single-stranded DNA-binding protein;protein_id=WP_038273093.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2776850 2777059 . + . ID=gene-LPH41_RS11675;Name=LPH41_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11675;old_locus_tag=LPH41_11675 NZ_CP087680.1 Protein Homology CDS 2776850 2777059 . + 0 ID=cds-WP_230428208.1-2;Parent=gene-LPH41_RS11675;Dbxref=Genbank:WP_230428208.1;Name=WP_230428208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH41_RS11675;product=hypothetical protein;protein_id=WP_230428208.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2777068 2777286 . + . ID=gene-LPH41_RS11680;Name=LPH41_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11680;old_locus_tag=LPH41_11680 NZ_CP087680.1 Protein Homology CDS 2777068 2777286 . + 0 ID=cds-WP_051482398.1-2;Parent=gene-LPH41_RS11680;Dbxref=Genbank:WP_051482398.1;Name=WP_051482398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017194.2;locus_tag=LPH41_RS11680;product=major capsid protein;protein_id=WP_051482398.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2777754 2778821 . + . ID=gene-LPH41_RS11685;Name=LPH41_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11685;old_locus_tag=LPH41_11685 NZ_CP087680.1 Protein Homology CDS 2777754 2778821 . + 0 ID=cds-WP_152536670.1-2;Parent=gene-LPH41_RS11685;Dbxref=Genbank:WP_152536670.1;Name=WP_152536670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041109.1;locus_tag=LPH41_RS11685;product=virulence factor TspB C-terminal domain-related protein;protein_id=WP_152536670.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2778825 2779166 . + . ID=gene-LPH41_RS11690;Name=LPH41_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11690;old_locus_tag=LPH41_11690 NZ_CP087680.1 Protein Homology CDS 2778825 2779166 . + 0 ID=cds-WP_038273089.1-2;Parent=gene-LPH41_RS11690;Dbxref=Genbank:WP_038273089.1;Name=WP_038273089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH41_RS11690;product=DUF2523 family protein;protein_id=WP_038273089.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2779166 2780314 . + . ID=gene-LPH41_RS11695;Name=LPH41_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11695;old_locus_tag=LPH41_11695 NZ_CP087680.1 Protein Homology CDS 2779166 2780314 . + 0 ID=cds-WP_069636227.1-2;Parent=gene-LPH41_RS11695;Dbxref=Genbank:WP_069636227.1;Name=WP_069636227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH41_RS11695;product=hypothetical protein;protein_id=WP_069636227.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2780415 2780738 . - . ID=gene-LPH41_RS11700;Name=LPH41_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11700;old_locus_tag=LPH41_11700 NZ_CP087680.1 Protein Homology CDS 2780415 2780738 . - 0 ID=cds-WP_038273166.1;Parent=gene-LPH41_RS11700;Dbxref=Genbank:WP_038273166.1;Name=WP_038273166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159824.1;locus_tag=LPH41_RS11700;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_038273166.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2780735 2780956 . - . ID=gene-LPH41_RS11705;Name=LPH41_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11705;old_locus_tag=LPH41_11705 NZ_CP087680.1 Protein Homology CDS 2780735 2780956 . - 0 ID=cds-WP_038273164.1;Parent=gene-LPH41_RS11705;Dbxref=Genbank:WP_038273164.1;Name=WP_038273164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894329.1;locus_tag=LPH41_RS11705;product=antitoxin MazE family protein;protein_id=WP_038273164.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2781404 2782210 . + . ID=gene-LPH41_RS11710;Name=LPH41_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11710;old_locus_tag=LPH41_11710 NZ_CP087680.1 Protein Homology CDS 2781404 2782210 . + 0 ID=cds-WP_230439338.1;Parent=gene-LPH41_RS11710;Dbxref=Genbank:WP_230439338.1;Name=WP_230439338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LPH41_RS11710;product=site-specific integrase;protein_id=WP_230439338.1;transl_table=11 NZ_CP087680.1 RefSeq pseudogene 2782173 2782322 . - . ID=gene-LPH41_RS11715;Name=LPH41_RS11715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH41_RS11715;old_locus_tag=LPH41_11715;partial=true;pseudo=true;start_range=.,2782173 NZ_CP087680.1 Protein Homology CDS 2782173 2782322 . - 0 ID=cds-LPH41_RS11715;Parent=gene-LPH41_RS11715;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LPH41_RS11715;partial=true;product=DUF3693 domain-containing protein;pseudo=true;start_range=.,2782173;transl_table=11 NZ_CP087680.1 RefSeq gene 2782612 2782773 . + . ID=gene-LPH41_RS11720;Name=LPH41_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11720;old_locus_tag=LPH41_11720 NZ_CP087680.1 GeneMarkS-2+ CDS 2782612 2782773 . + 0 ID=cds-WP_230439292.1;Parent=gene-LPH41_RS11720;Dbxref=Genbank:WP_230439292.1;Name=WP_230439292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11720;product=hypothetical protein;protein_id=WP_230439292.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2782777 2783040 . + . ID=gene-LPH41_RS11725;Name=LPH41_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11725;old_locus_tag=LPH41_11725 NZ_CP087680.1 GeneMarkS-2+ CDS 2782777 2783040 . + 0 ID=cds-WP_162814095.1-2;Parent=gene-LPH41_RS11725;Dbxref=Genbank:WP_162814095.1;Name=WP_162814095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11725;product=hypothetical protein;protein_id=WP_162814095.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2783089 2783289 . + . ID=gene-LPH41_RS11730;Name=LPH41_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11730;old_locus_tag=LPH41_11730 NZ_CP087680.1 Protein Homology CDS 2783089 2783289 . + 0 ID=cds-WP_038273077.1-2;Parent=gene-LPH41_RS11730;Dbxref=Genbank:WP_038273077.1;Name=WP_038273077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH41_RS11730;product=hypothetical protein;protein_id=WP_038273077.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2783409 2783552 . + . ID=gene-LPH41_RS11735;Name=LPH41_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11735;old_locus_tag=LPH41_11735 NZ_CP087680.1 GeneMarkS-2+ CDS 2783409 2783552 . + 0 ID=cds-WP_160165233.1-2;Parent=gene-LPH41_RS11735;Dbxref=Genbank:WP_160165233.1;Name=WP_160165233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH41_RS11735;product=hypothetical protein;protein_id=WP_160165233.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2783749 2784336 . + . ID=gene-LPH41_RS11740;Name=LPH41_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11740;old_locus_tag=LPH41_11740 NZ_CP087680.1 Protein Homology CDS 2783749 2784336 . + 0 ID=cds-WP_038273076.1-2;Parent=gene-LPH41_RS11740;Dbxref=Genbank:WP_038273076.1;Name=WP_038273076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894347.1;locus_tag=LPH41_RS11740;product=hypothetical protein;protein_id=WP_038273076.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2784612 2784926 . + . ID=gene-LPH41_RS11745;Name=LPH41_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11745;old_locus_tag=LPH41_11745 NZ_CP087680.1 Protein Homology CDS 2784612 2784926 . + 0 ID=cds-WP_230428211.1-2;Parent=gene-LPH41_RS11745;Dbxref=Genbank:WP_230428211.1;Name=WP_230428211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474436.1;locus_tag=LPH41_RS11745;product=hypothetical protein;protein_id=WP_230428211.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2784929 2785135 . + . ID=gene-LPH41_RS11750;Name=LPH41_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11750;old_locus_tag=LPH41_11750 NZ_CP087680.1 Protein Homology CDS 2784929 2785135 . + 0 ID=cds-WP_038273075.1-2;Parent=gene-LPH41_RS11750;Dbxref=Genbank:WP_038273075.1;Name=WP_038273075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH41_RS11750;product=hypothetical protein;protein_id=WP_038273075.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2785144 2785380 . + . ID=gene-LPH41_RS11755;Name=LPH41_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11755;old_locus_tag=LPH41_11755 NZ_CP087680.1 Protein Homology CDS 2785144 2785380 . + 0 ID=cds-WP_230428212.1-2;Parent=gene-LPH41_RS11755;Dbxref=Genbank:WP_230428212.1;Name=WP_230428212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382572.1;locus_tag=LPH41_RS11755;product=major capsid protein;protein_id=WP_230428212.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2785560 2786945 . + . ID=gene-LPH41_RS11760;Name=LPH41_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11760;old_locus_tag=LPH41_11760 NZ_CP087680.1 Protein Homology CDS 2785560 2786945 . + 0 ID=cds-WP_230428213.1-2;Parent=gene-LPH41_RS11760;Dbxref=Genbank:WP_230428213.1;Name=WP_230428213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097844.1;locus_tag=LPH41_RS11760;product=furin-like repeat-containing protein;protein_id=WP_230428213.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2786948 2787292 . + . ID=gene-LPH41_RS11765;Name=LPH41_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11765;old_locus_tag=LPH41_11765 NZ_CP087680.1 Protein Homology CDS 2786948 2787292 . + 0 ID=cds-WP_038273069.1-2;Parent=gene-LPH41_RS11765;Dbxref=Genbank:WP_038273069.1;Name=WP_038273069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH41_RS11765;product=DUF2523 family protein;protein_id=WP_038273069.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2787305 2788432 . + . ID=gene-LPH41_RS11770;Name=LPH41_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11770;old_locus_tag=LPH41_11770 NZ_CP087680.1 Protein Homology CDS 2787305 2788432 . + 0 ID=cds-WP_114867127.1-2;Parent=gene-LPH41_RS11770;Dbxref=Genbank:WP_114867127.1;Name=WP_114867127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH41_RS11770;product=hypothetical protein;protein_id=WP_114867127.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2788521 2788781 . + . ID=gene-LPH41_RS11775;Name=LPH41_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11775;old_locus_tag=LPH41_11775 NZ_CP087680.1 Protein Homology CDS 2788521 2788781 . + 0 ID=cds-WP_038272513.1;Parent=gene-LPH41_RS11775;Dbxref=Genbank:WP_038272513.1;Name=WP_038272513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729703.1;locus_tag=LPH41_RS11775;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_038272513.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2788781 2789053 . + . ID=gene-LPH41_RS11780;Name=LPH41_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11780;old_locus_tag=LPH41_11780 NZ_CP087680.1 Protein Homology CDS 2788781 2789053 . + 0 ID=cds-WP_038272512.1;Parent=gene-LPH41_RS11780;Dbxref=Genbank:WP_038272512.1;Name=WP_038272512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615979.1;locus_tag=LPH41_RS11780;product=type II toxin-antitoxin system mRNA interferase toxin%2C RelE/StbE family;protein_id=WP_038272512.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2789089 2789433 . - . ID=gene-LPH41_RS11785;Name=LPH41_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11785;old_locus_tag=LPH41_11785 NZ_CP087680.1 Protein Homology CDS 2789089 2789433 . - 0 ID=cds-WP_038272511.1;Parent=gene-LPH41_RS11785;Dbxref=Genbank:WP_038272511.1;Name=WP_038272511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087000.1;locus_tag=LPH41_RS11785;product=DUF3653 domain-containing protein;protein_id=WP_038272511.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2789599 2790243 . - . ID=gene-LPH41_RS11790;Name=LPH41_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11790;old_locus_tag=LPH41_11790 NZ_CP087680.1 Protein Homology CDS 2789599 2790243 . - 0 ID=cds-WP_038272466.1;Parent=gene-LPH41_RS11790;Dbxref=Genbank:WP_038272466.1;Name=WP_038272466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910762.1;locus_tag=LPH41_RS11790;product=histidine phosphatase family protein;protein_id=WP_038272466.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2790350 2792425 . - . ID=gene-LPH41_RS11795;Name=LPH41_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11795;old_locus_tag=LPH41_11795 NZ_CP087680.1 Protein Homology CDS 2790350 2792425 . - 0 ID=cds-WP_230428285.1;Parent=gene-LPH41_RS11795;Dbxref=Genbank:WP_230428285.1;Name=WP_230428285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572915.1;locus_tag=LPH41_RS11795;product=S46 family peptidase;protein_id=WP_230428285.1;transl_table=11 NZ_CP087680.1 cmsearch riboswitch 2792673 2792771 . + . ID=id-NZ_CP087680.1:2792673..2792771;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087680.1 RefSeq gene 2792877 2794634 . + . ID=gene-LPH41_RS11800;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LPH41_RS11800;old_locus_tag=LPH41_11800 NZ_CP087680.1 Protein Homology CDS 2792877 2794634 . + 0 ID=cds-WP_051482371.1;Parent=gene-LPH41_RS11800;Dbxref=Genbank:WP_051482371.1;Name=WP_051482371.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097836.1;locus_tag=LPH41_RS11800;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_051482371.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2794769 2795548 . + . ID=gene-LPH41_RS11805;Name=LPH41_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11805;old_locus_tag=LPH41_11805 NZ_CP087680.1 Protein Homology CDS 2794769 2795548 . + 0 ID=cds-WP_038272469.1;Parent=gene-LPH41_RS11805;Dbxref=Genbank:WP_038272469.1;Name=WP_038272469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966679.1;locus_tag=LPH41_RS11805;product=ferredoxin--NADP reductase;protein_id=WP_038272469.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2795552 2796043 . - . ID=gene-LPH41_RS11810;Name=LPH41_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11810;old_locus_tag=LPH41_11810 NZ_CP087680.1 Protein Homology CDS 2795552 2796043 . - 0 ID=cds-WP_038272471.1;Parent=gene-LPH41_RS11810;Dbxref=Genbank:WP_038272471.1;Name=WP_038272471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572911.1;locus_tag=LPH41_RS11810;product=glutathione peroxidase;protein_id=WP_038272471.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2796608 2798140 . + . ID=gene-LPH41_RS11815;Name=LPH41_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11815;old_locus_tag=LPH41_11815 NZ_CP087680.1 Protein Homology CDS 2796608 2798140 . + 0 ID=cds-WP_038272473.1;Parent=gene-LPH41_RS11815;Dbxref=Genbank:WP_038272473.1;Name=WP_038272473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852766.1;locus_tag=LPH41_RS11815;product=peptide MFS transporter;protein_id=WP_038272473.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2798303 2799025 . - . ID=gene-LPH41_RS11820;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=LPH41_RS11820;old_locus_tag=LPH41_11820 NZ_CP087680.1 Protein Homology CDS 2798303 2799025 . - 0 ID=cds-WP_230439293.1;Parent=gene-LPH41_RS11820;Dbxref=Genbank:WP_230439293.1;Name=WP_230439293.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894358.1;locus_tag=LPH41_RS11820;product=deoxyribonuclease V;protein_id=WP_230439293.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2799121 2799870 . + . ID=gene-LPH41_RS11825;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LPH41_RS11825;old_locus_tag=LPH41_11825 NZ_CP087680.1 Protein Homology CDS 2799121 2799870 . + 0 ID=cds-WP_038272477.1;Parent=gene-LPH41_RS11825;Dbxref=Genbank:WP_038272477.1;Name=WP_038272477.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167506.1;locus_tag=LPH41_RS11825;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_038272477.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2799941 2800621 . - . ID=gene-LPH41_RS11830;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LPH41_RS11830;old_locus_tag=LPH41_11830 NZ_CP087680.1 Protein Homology CDS 2799941 2800621 . - 0 ID=cds-WP_051482372.1;Parent=gene-LPH41_RS11830;Dbxref=Genbank:WP_051482372.1;Name=WP_051482372.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159812.1;locus_tag=LPH41_RS11830;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_051482372.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2800666 2801493 . - . ID=gene-LPH41_RS11835;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LPH41_RS11835;old_locus_tag=LPH41_11835 NZ_CP087680.1 Protein Homology CDS 2800666 2801493 . - 0 ID=cds-WP_038272479.1;Parent=gene-LPH41_RS11835;Dbxref=Genbank:WP_038272479.1;Name=WP_038272479.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572906.1;locus_tag=LPH41_RS11835;product=tol-pal system protein YbgF;protein_id=WP_038272479.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2801497 2802030 . - . ID=gene-LPH41_RS11840;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LPH41_RS11840;old_locus_tag=LPH41_11840 NZ_CP087680.1 Protein Homology CDS 2801497 2802030 . - 0 ID=cds-WP_038272481.1;Parent=gene-LPH41_RS11840;Dbxref=Genbank:WP_038272481.1;Name=WP_038272481.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344309.1;locus_tag=LPH41_RS11840;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_038272481.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2802093 2803418 . - . ID=gene-LPH41_RS11845;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LPH41_RS11845;old_locus_tag=LPH41_11845 NZ_CP087680.1 Protein Homology CDS 2802093 2803418 . - 0 ID=cds-WP_038272484.1;Parent=gene-LPH41_RS11845;Dbxref=Genbank:WP_038272484.1;Name=WP_038272484.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445349.1;locus_tag=LPH41_RS11845;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_038272484.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2803884 2804909 . - . ID=gene-LPH41_RS11850;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LPH41_RS11850;old_locus_tag=LPH41_11850 NZ_CP087680.1 Protein Homology CDS 2803884 2804909 . - 0 ID=cds-WP_038272486.1;Parent=gene-LPH41_RS11850;Dbxref=Genbank:WP_038272486.1;Name=WP_038272486.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085419.1;locus_tag=LPH41_RS11850;product=cell envelope integrity protein TolA;protein_id=WP_038272486.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2804899 2805342 . - . ID=gene-LPH41_RS11855;Name=LPH41_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11855;old_locus_tag=LPH41_11855 NZ_CP087680.1 Protein Homology CDS 2804899 2805342 . - 0 ID=cds-WP_038272488.1;Parent=gene-LPH41_RS11855;Dbxref=Genbank:WP_038272488.1;Name=WP_038272488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852772.1;locus_tag=LPH41_RS11855;product=ExbD/TolR family protein;protein_id=WP_038272488.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2805375 2806148 . - . ID=gene-LPH41_RS11860;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LPH41_RS11860;old_locus_tag=LPH41_11860 NZ_CP087680.1 Protein Homology CDS 2805375 2806148 . - 0 ID=cds-WP_038272490.1;Parent=gene-LPH41_RS11860;Dbxref=Genbank:WP_038272490.1;Name=WP_038272490.1;Ontology_term=GO:1902600,GO:0015078,GO:0005886;gbkey=CDS;gene=tolQ;go_component=plasma membrane|0005886||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410752.1;locus_tag=LPH41_RS11860;product=protein TolQ;protein_id=WP_038272490.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2806145 2806585 . - . ID=gene-LPH41_RS11865;Name=LPH41_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11865;old_locus_tag=LPH41_11865 NZ_CP087680.1 Protein Homology CDS 2806145 2806585 . - 0 ID=cds-WP_230439339.1;Parent=gene-LPH41_RS11865;Dbxref=Genbank:WP_230439339.1;Name=WP_230439339.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472570.1;locus_tag=LPH41_RS11865;product=YbgC/FadM family acyl-CoA thioesterase;protein_id=WP_230439339.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2806612 2807643 . - . ID=gene-LPH41_RS11870;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LPH41_RS11870;old_locus_tag=LPH41_11870 NZ_CP087680.1 Protein Homology CDS 2806612 2807643 . - 0 ID=cds-WP_038272492.1;Parent=gene-LPH41_RS11870;Dbxref=Genbank:WP_038272492.1;Name=WP_038272492.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085423.1;locus_tag=LPH41_RS11870;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_038272492.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2807752 2809656 . - . ID=gene-LPH41_RS11875;Name=LPH41_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11875;old_locus_tag=LPH41_11875 NZ_CP087680.1 Protein Homology CDS 2807752 2809656 . - 0 ID=cds-WP_038272494.1;Parent=gene-LPH41_RS11875;Dbxref=Genbank:WP_038272494.1;Name=WP_038272494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572898.1;locus_tag=LPH41_RS11875;product=potassium transporter Kup;protein_id=WP_038272494.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2809713 2810297 . - . ID=gene-LPH41_RS11880;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LPH41_RS11880;old_locus_tag=LPH41_11880 NZ_CP087680.1 Protein Homology CDS 2809713 2810297 . - 0 ID=cds-WP_038272496.1;Parent=gene-LPH41_RS11880;Dbxref=Genbank:WP_038272496.1;Name=WP_038272496.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258432.1;locus_tag=LPH41_RS11880;product=Holliday junction branch migration protein RuvA;protein_id=WP_038272496.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2810386 2810907 . - . ID=gene-LPH41_RS11885;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LPH41_RS11885;old_locus_tag=LPH41_11885 NZ_CP087680.1 Protein Homology CDS 2810386 2810907 . - 0 ID=cds-WP_038272498.1;Parent=gene-LPH41_RS11885;Dbxref=Genbank:WP_038272498.1;Name=WP_038272498.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097831.1;locus_tag=LPH41_RS11885;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_038272498.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2811012 2811746 . - . ID=gene-LPH41_RS11890;Name=LPH41_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11890;old_locus_tag=LPH41_11890 NZ_CP087680.1 Protein Homology CDS 2811012 2811746 . - 0 ID=cds-WP_038272500.1;Parent=gene-LPH41_RS11890;Dbxref=Genbank:WP_038272500.1;Name=WP_038272500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052063.1;locus_tag=LPH41_RS11890;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_038272500.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2813627 2814106 . - . ID=gene-LPH41_RS11895;Name=LPH41_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11895;old_locus_tag=LPH41_11895 NZ_CP087680.1 Protein Homology CDS 2813627 2814106 . - 0 ID=cds-WP_081755474.1;Parent=gene-LPH41_RS11895;Dbxref=Genbank:WP_081755474.1;Name=WP_081755474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337826.1;locus_tag=LPH41_RS11895;product=DUF2726 domain-containing protein;protein_id=WP_081755474.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2814403 2814675 . - . ID=gene-LPH41_RS11900;Name=LPH41_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11900;old_locus_tag=LPH41_11900 NZ_CP087680.1 Protein Homology CDS 2814403 2814675 . - 0 ID=cds-WP_038272505.1;Parent=gene-LPH41_RS11900;Dbxref=Genbank:WP_038272505.1;Name=WP_038272505.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337777.1;locus_tag=LPH41_RS11900;product=oxidative damage protection protein;protein_id=WP_038272505.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2814710 2815759 . - . ID=gene-LPH41_RS11905;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LPH41_RS11905;old_locus_tag=LPH41_11905 NZ_CP087680.1 Protein Homology CDS 2814710 2815759 . - 0 ID=cds-WP_038272506.1;Parent=gene-LPH41_RS11905;Dbxref=Genbank:WP_038272506.1;Name=WP_038272506.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572892.1;locus_tag=LPH41_RS11905;product=A/G-specific adenine glycosylase;protein_id=WP_038272506.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2815851 2817062 . - . ID=gene-LPH41_RS11910;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LPH41_RS11910;old_locus_tag=LPH41_11910 NZ_CP087680.1 Protein Homology CDS 2815851 2817062 . - 0 ID=cds-WP_038272508.1;Parent=gene-LPH41_RS11910;Dbxref=Genbank:WP_038272508.1;Name=WP_038272508.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852793.1;locus_tag=LPH41_RS11910;product=signal recognition particle-docking protein FtsY;protein_id=WP_038272508.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2817907 2818380 . + . ID=gene-LPH41_RS11915;Name=LPH41_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11915;old_locus_tag=LPH41_11915 NZ_CP087680.1 Protein Homology CDS 2817907 2818380 . + 0 ID=cds-WP_038272510.1;Parent=gene-LPH41_RS11915;Dbxref=Genbank:WP_038272510.1;Name=WP_038272510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448491.1;locus_tag=LPH41_RS11915;product=LEA type 2 family protein;protein_id=WP_038272510.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2818656 2819270 . + . ID=gene-LPH41_RS11920;Name=LPH41_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11920;old_locus_tag=LPH41_11920 NZ_CP087680.1 Protein Homology CDS 2818656 2819270 . + 0 ID=cds-WP_081755477.1;Parent=gene-LPH41_RS11920;Dbxref=Genbank:WP_081755477.1;Name=WP_081755477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852792.1;locus_tag=LPH41_RS11920;product=HNH endonuclease;protein_id=WP_081755477.1;transl_table=11 NZ_CP087680.1 RefSeq gene 2819767 2820099 . + . ID=gene-LPH41_RS11925;Name=LPH41_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH41_RS11925;old_locus_tag=LPH41_11925 NZ_CP087680.1 Protein Homology CDS 2819767 2820099 . + 0 ID=cds-WP_268980386.1;Parent=gene-LPH41_RS11925;Dbxref=Genbank:WP_268980386.1;Name=WP_268980386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LPH41_RS11925;product=DUF3693 domain-containing protein;protein_id=WP_268980386.1;transl_table=11 ###