locus-tag class description LPH58_RS00005 PF00308 Bacterial dnaA protein LPH58_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LPH58_RS00005 PF11638 DnaA N-terminal domain LPH58_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LPH58_RS00010 PF02767 DNA polymerase III beta subunit, central domain LPH58_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LPH58_RS00015 PF02463 RecF/RecN/SMC N terminal domain LPH58_RS00020 PF00204 DNA gyrase B LPH58_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus LPH58_RS00020 PF18053 DNA gyrase B subunit insert domain LPH58_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS00020 PF01751 Toprim domain LPH58_RS00030 PF01435 Peptidase family M48 LPH58_RS00040 PF03544 Gram-negative bacterial TonB protein C-terminal LPH58_RS00045 PF01618 MotA/TolQ/ExbB proton channel family LPH58_RS00050 PF02472 Biopolymer transport protein ExbD/TolR LPH58_RS00055 PF02472 Biopolymer transport protein ExbD/TolR LPH58_RS00075 PF01218 Coproporphyrinogen III oxidase LPH58_RS00100 PF00793 DAHP synthetase I family LPH58_RS00105 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS00105 PF00114 Pilin (bacterial filament) LPH58_RS00125 PF05567 Neisseria PilC beta-propeller domain LPH58_RS00130 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS00130 PF00114 Pilin (bacterial filament) LPH58_RS00135 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LPH58_RS00140 PF00155 Aminotransferase class I and II LPH58_RS00145 PF01741 Large-conductance mechanosensitive channel, MscL LPH58_RS00170 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LPH58_RS00180 PF02559 CarD-like/TRCF domain LPH58_RS00180 PF03461 TRCF domain LPH58_RS00180 PF17757 UvrB interaction domain LPH58_RS00180 PF00271 Helicase conserved C-terminal domain LPH58_RS00180 PF00270 DEAD/DEAH box helicase LPH58_RS00185 PF01220 Dehydroquinase class II LPH58_RS00190 PF00364 Biotin-requiring enzyme LPH58_RS00195 PF02785 Biotin carboxylase C-terminal domain LPH58_RS00195 PF00289 Biotin carboxylase, N-terminal domain LPH58_RS00195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH58_RS00200 PF13361 UvrD-like helicase C-terminal domain LPH58_RS00200 PF00580 UvrD/REP helicase N-terminal domain LPH58_RS00210 PF00970 Oxidoreductase FAD-binding domain LPH58_RS00210 PF00042 Globin LPH58_RS00210 PF00175 Oxidoreductase NAD-binding domain LPH58_RS00220 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LPH58_RS00225 PF02195 ParB-like nuclease domain LPH58_RS00225 PF06613 KorB C-terminal beta-barrel domain LPH58_RS00225 PF08535 KorB domain LPH58_RS00240 PF04055 Radical SAM superfamily LPH58_RS00240 PF06968 Biotin and Thiamin Synthesis associated domain LPH58_RS00245 PF01734 Patatin-like phospholipase LPH58_RS00250 PF01040 UbiA prenyltransferase family LPH58_RS00270 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family LPH58_RS00305 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH58_RS00305 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH58_RS00315 PF00448 SRP54-type protein, GTPase domain LPH58_RS00315 PF02881 SRP54-type protein, helical bundle domain LPH58_RS00315 PF02978 Signal peptide binding domain LPH58_RS00335 PF13953 PapC C-terminal domain LPH58_RS00335 PF13954 PapC N-terminal domain LPH58_RS00335 PF00577 Outer membrane usher protein LPH58_RS00340 PF02753 Pili assembly chaperone PapD, C-terminal domain LPH58_RS00340 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain LPH58_RS00345 PF16970 Type-1 fimbrial protein, A LPH58_RS00350 PF02464 Competence-damaged protein LPH58_RS00355 PF00083 Sugar (and other) transporter LPH58_RS00360 PF01926 50S ribosome-binding GTPase LPH58_RS00360 PF13167 GTP-binding GTPase N-terminal LPH58_RS00360 PF16360 GTP-binding GTPase Middle Region LPH58_RS00365 PF17209 Hfq protein LPH58_RS00375 PF00809 Pterin binding enzyme LPH58_RS00380 PF17862 AAA+ lid domain LPH58_RS00380 PF01434 Peptidase family M41 LPH58_RS00380 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_RS00380 PF06480 FtsH Extracellular LPH58_RS00385 PF01728 FtsJ-like methyltransferase LPH58_RS00390 PF01985 CRS1 / YhbY (CRM) domain LPH58_RS00405 PF00920 Dehydratase family LPH58_RS00435 PF03279 Bacterial lipid A biosynthesis acyltransferase LPH58_RS00440 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LPH58_RS00460 PF00886 Ribosomal protein S16 LPH58_RS00465 PF05239 PRC-barrel domain LPH58_RS00465 PF01782 RimM N-terminal domain LPH58_RS00470 PF01746 tRNA (Guanine-1)-methyltransferase LPH58_RS00475 PF01245 Ribosomal protein L19 LPH58_RS00480 PF00557 Metallopeptidase family M24 LPH58_RS00490 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LPH58_RS00490 PF14602 Hexapeptide repeat of succinyl-transferase LPH58_RS00490 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_RS00495 PF03960 ArsC family LPH58_RS00500 PF01546 Peptidase family M20/M25/M40 LPH58_RS00500 PF07687 Peptidase dimerisation domain LPH58_RS00505 PF00733 Asparagine synthase LPH58_RS00505 PF13537 Glutamine amidotransferase domain LPH58_RS00515 PF03060 Nitronate monooxygenase LPH58_RS00525 PF00717 Peptidase S24-like LPH58_RS00525 PF01726 LexA DNA binding domain LPH58_RS00530 PF00154 recA bacterial DNA recombination protein LPH58_RS00535 PF02272 DHHA1 domain LPH58_RS00535 PF01411 tRNA synthetases class II (A) LPH58_RS00535 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH58_RS00540 PF02599 Global regulator protein family LPH58_RS00550 PF01432 Peptidase family M3 LPH58_RS00565 PF07731 Multicopper oxidase LPH58_RS00565 PF00394 Multicopper oxidase LPH58_RS00565 PF07732 Multicopper oxidase LPH58_RS00570 PF05275 Copper resistance protein B precursor (CopB) LPH58_RS00575 PF10458 Valyl tRNA synthetase tRNA binding arm LPH58_RS00575 PF00133 tRNA synthetases class I (I, L, M and V) LPH58_RS00575 PF08264 Anticodon-binding domain of tRNA LPH58_RS00595 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH58_RS00595 PF00883 Cytosol aminopeptidase family, catalytic domain LPH58_RS00615 PF01380 SIS domain LPH58_RS00630 PF17284 Spermidine synthase tetramerisation domain LPH58_RS00635 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LPH58_RS00635 PF17810 Arginine decarboxylase helical bundle domain LPH58_RS00635 PF17944 Arginine decarboxylase C-terminal helical extension LPH58_RS00640 PF00106 short chain dehydrogenase LPH58_RS00650 PF00750 tRNA synthetases class I (R) LPH58_RS00650 PF05746 DALR anticodon binding domain LPH58_RS00650 PF03485 Arginyl tRNA synthetase N terminal domain LPH58_RS00655 PF04002 RadC-like JAB domain LPH58_RS00660 PF04127 DNA / pantothenate metabolism flavoprotein LPH58_RS00660 PF02441 Flavoprotein LPH58_RS00665 PF00692 dUTPase LPH58_RS00670 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH58_RS00670 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH58_RS00670 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH58_RS00670 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH58_RS00680 PF00156 Phosphoribosyl transferase domain LPH58_RS00725 PF07690 Major Facilitator Superfamily LPH58_RS00730 PF03702 Anhydro-N-acetylmuramic acid kinase LPH58_RS00735 PF04225 Opacity-associated protein A LysM-like domain LPH58_RS00735 PF01551 Peptidase family M23 LPH58_RS00740 PF00579 tRNA synthetases class I (W and Y) LPH58_RS00770 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LPH58_RS00770 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LPH58_RS00800 PF00009 Elongation factor Tu GTP binding domain LPH58_RS00800 PF16658 Class II release factor RF3, C-terminal domain LPH58_RS00805 PF03006 Haemolysin-III related LPH58_RS00810 PF00535 Glycosyl transferase family 2 LPH58_RS00815 PF01026 TatD related DNase LPH58_RS00830 PF01597 Glycine cleavage H-protein LPH58_RS00835 PF08669 Glycine cleavage T-protein C-terminal barrel domain LPH58_RS00835 PF01571 Aminomethyltransferase folate-binding domain LPH58_RS00845 PF01145 SPFH domain / Band 7 family LPH58_RS00845 PF16200 C-terminal region of band_7 LPH58_RS00850 PF03819 MazG nucleotide pyrophosphohydrolase domain LPH58_RS00855 PF00459 Inositol monophosphatase family LPH58_RS00860 PF00293 NUDIX domain LPH58_RS00865 PF00202 Aminotransferase class-III LPH58_RS00870 PF04452 RNA methyltransferase LPH58_RS00880 PF00270 DEAD/DEAH box helicase LPH58_RS00880 PF00271 Helicase conserved C-terminal domain LPH58_RS00885 PF01242 6-pyruvoyl tetrahydropterin synthase LPH58_RS00910 PF03653 Uncharacterised protein family (UPF0093) LPH58_RS00915 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LPH58_RS00920 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LPH58_RS00920 PF01336 OB-fold nucleic acid binding domain LPH58_RS00920 PF07733 Bacterial DNA polymerase III alpha NTPase domain LPH58_RS00920 PF02811 PHP domain LPH58_RS00920 PF14579 Helix-hairpin-helix motif LPH58_RS00925 PF01259 SAICAR synthetase LPH58_RS00930 PF00226 DnaJ domain LPH58_RS00930 PF05099 Tellurite resistance protein TerB LPH58_RS00935 PF00834 Ribulose-phosphate 3 epimerase family LPH58_RS00945 PF00425 chorismate binding enzyme LPH58_RS00945 PF04715 Anthranilate synthase component I, N terminal region LPH58_RS00950 PF00117 Glutamine amidotransferase class-I LPH58_RS00955 PF02885 Glycosyl transferase family, helical bundle domain LPH58_RS00955 PF00591 Glycosyl transferase family, a/b domain LPH58_RS00960 PF00218 Indole-3-glycerol phosphate synthase LPH58_RS00975 PF12849 PBP superfamily domain LPH58_RS00995 PF01321 Creatinase/Prolidase N-terminal domain LPH58_RS00995 PF00557 Metallopeptidase family M24 LPH58_RS01010 PF01702 Queuine tRNA-ribosyltransferase LPH58_RS01015 PF02699 Preprotein translocase subunit LPH58_RS01020 PF07549 SecD/SecF GG Motif LPH58_RS01020 PF13721 SecD export protein N-terminal TM region LPH58_RS01020 PF02355 Protein export membrane protein LPH58_RS01025 PF02355 Protein export membrane protein LPH58_RS01025 PF07549 SecD/SecF GG Motif LPH58_RS01035 PF01743 Poly A polymerase head domain LPH58_RS01035 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH58_RS01035 PF12626 Polymerase A arginine-rich C-terminus LPH58_RS01040 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LPH58_RS01045 PF02548 Ketopantoate hydroxymethyltransferase LPH58_RS01050 PF02569 Pantoate-beta-alanine ligase LPH58_RS01055 PF02261 Aspartate decarboxylase LPH58_RS01060 PF00342 Phosphoglucose isomerase LPH58_RS01070 PF02576 RimP N-terminal domain LPH58_RS01070 PF17384 RimP C-terminal SH3 domain LPH58_RS01075 PF13184 NusA-like KH domain LPH58_RS01075 PF08529 NusA N-terminal domain LPH58_RS01075 PF00575 S1 RNA binding domain LPH58_RS01080 PF11987 Translation-initiation factor 2 LPH58_RS01080 PF04760 Translation initiation factor IF-2, N-terminal region LPH58_RS01080 PF00009 Elongation factor Tu GTP binding domain LPH58_RS01080 PF08364 Bacterial translation initiation factor IF-2 associated region LPH58_RS01085 PF02033 Ribosome-binding factor A LPH58_RS01090 PF09157 Pseudouridine synthase II TruB, C-terminal LPH58_RS01090 PF16198 tRNA pseudouridylate synthase B C-terminal domain LPH58_RS01090 PF01509 TruB family pseudouridylate synthase (N terminal domain) LPH58_RS01095 PF00312 Ribosomal protein S15 LPH58_RS01100 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LPH58_RS01100 PF01138 3' exoribonuclease family, domain 1 LPH58_RS01100 PF00575 S1 RNA binding domain LPH58_RS01100 PF00013 KH domain LPH58_RS01100 PF03725 3' exoribonuclease family, domain 2 LPH58_RS01105 PF01638 HxlR-like helix-turn-helix LPH58_RS01110 PF05368 NmrA-like family LPH58_RS01115 PF00873 AcrB/AcrD/AcrF family LPH58_RS01125 PF00999 Sodium/hydrogen exchanger family LPH58_RS01145 PF03880 DbpA RNA binding domain LPH58_RS01145 PF00270 DEAD/DEAH box helicase LPH58_RS01145 PF00271 Helicase conserved C-terminal domain LPH58_RS01150 PF00766 Electron transfer flavoprotein FAD-binding domain LPH58_RS01150 PF01012 Electron transfer flavoprotein domain LPH58_RS01155 PF01012 Electron transfer flavoprotein domain LPH58_RS01160 PF16363 GDP-mannose 4,6 dehydratase LPH58_RS01165 PF00483 Nucleotidyl transferase LPH58_RS01170 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LPH58_RS01175 PF04321 RmlD substrate binding domain LPH58_RS01180 PF01050 Mannose-6-phosphate isomerase LPH58_RS01180 PF00483 Nucleotidyl transferase LPH58_RS01185 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH58_RS01185 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH58_RS01185 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH58_RS01185 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH58_RS01230 PF00082 Subtilase family LPH58_RS01230 PF03797 Autotransporter beta-domain LPH58_RS01230 PF12951 Passenger-associated-transport-repeat LPH58_RS01235 PF03797 Autotransporter beta-domain LPH58_RS01235 PF12951 Passenger-associated-transport-repeat LPH58_RS01235 PF00082 Subtilase family LPH58_RS01240 PF06779 Uncharacterised MFS-type transporter YbfB LPH58_RS01245 PF07669 Eco57I restriction-modification methylase LPH58_RS01255 PF00365 Phosphofructokinase LPH58_RS01265 PF08245 Mur ligase middle domain LPH58_RS01265 PF01225 Mur ligase family, catalytic domain LPH58_RS01265 PF02875 Mur ligase family, glutamate ligase domain LPH58_RS01270 PF01569 PAP2 superfamily LPH58_RS01295 PF00892 EamA-like transporter family LPH58_RS01300 PF00883 Cytosol aminopeptidase family, catalytic domain LPH58_RS01300 PF02789 Cytosol aminopeptidase family, N-terminal domain LPH58_RS01310 PF01594 AI-2E family transporter LPH58_RS01330 PF00595 PDZ domain LPH58_RS01335 PF08338 Domain of unknown function (DUF1731) LPH58_RS01335 PF01370 NAD dependent epimerase/dehydratase family LPH58_RS01340 PF00501 AMP-binding enzyme LPH58_RS01340 PF13193 AMP-binding enzyme C-terminal domain LPH58_RS01345 PF00694 Aconitase C-terminal domain LPH58_RS01345 PF00330 Aconitase family (aconitate hydratase) LPH58_RS01360 PF00330 Aconitase family (aconitate hydratase) LPH58_RS01360 PF06434 Aconitate hydratase 2 N-terminus LPH58_RS01360 PF11791 Aconitate B N-terminal domain LPH58_RS01375 PF02384 N-6 DNA Methylase LPH58_RS01380 PF01420 Type I restriction modification DNA specificity domain LPH58_RS01395 PF18766 SWI2/SNF2 ATPase LPH58_RS01395 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH58_RS01395 PF11867 Domain of unknown function (DUF3387) LPH58_RS01415 PF00121 Triosephosphate isomerase LPH58_RS01430 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LPH58_RS01435 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LPH58_RS01440 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LPH58_RS01445 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LPH58_RS01455 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LPH58_RS01455 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LPH58_RS01455 PF10531 SLBB domain LPH58_RS01460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LPH58_RS01460 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LPH58_RS01460 PF00384 Molybdopterin oxidoreductase LPH58_RS01465 PF00146 NADH dehydrogenase LPH58_RS01470 PF12838 4Fe-4S dicluster domain LPH58_RS01475 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LPH58_RS01480 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LPH58_RS01485 PF00361 Proton-conducting membrane transporter LPH58_RS01485 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LPH58_RS01490 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LPH58_RS01490 PF00361 Proton-conducting membrane transporter LPH58_RS01495 PF00361 Proton-conducting membrane transporter LPH58_RS01500 PF00106 short chain dehydrogenase LPH58_RS01505 PF03600 Citrate transporter LPH58_RS01515 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS01515 PF00072 Response regulator receiver domain LPH58_RS01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS01520 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS01520 PF08521 Two-component sensor kinase N-terminal LPH58_RS01530 PF00196 Bacterial regulatory proteins, luxR family LPH58_RS01530 PF00072 Response regulator receiver domain LPH58_RS01535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS01535 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS01535 PF01627 Hpt domain LPH58_RS01535 PF00072 Response regulator receiver domain LPH58_RS01535 PF00672 HAMP domain LPH58_RS01545 PF00375 Sodium:dicarboxylate symporter family LPH58_RS01550 PF00390 Malic enzyme, N-terminal domain LPH58_RS01550 PF03949 Malic enzyme, NAD binding domain LPH58_RS01550 PF01515 Phosphate acetyl/butaryl transferase LPH58_RS01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS01555 PF00183 Hsp90 protein LPH58_RS01565 PF01467 Cytidylyltransferase-like LPH58_RS01575 PF00037 4Fe-4S binding domain LPH58_RS01585 PF00990 Diguanylate cyclase, GGDEF domain LPH58_RS01590 PF01551 Peptidase family M23 LPH58_RS01590 PF01476 LysM domain LPH58_RS01595 PF01979 Amidohydrolase family LPH58_RS01600 PF01809 Putative membrane protein insertion efficiency factor LPH58_RS01605 PF01258 Prokaryotic dksA/traR C4-type zinc finger LPH58_RS01630 PF02657 Fe-S metabolism associated domain LPH58_RS01635 PF01406 tRNA synthetases class I (C) catalytic domain LPH58_RS01635 PF09190 DALR domain LPH58_RS01645 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH58_RS01645 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH58_RS01650 PF00764 Arginosuccinate synthase LPH58_RS01655 PF01546 Peptidase family M20/M25/M40 LPH58_RS01655 PF07687 Peptidase dimerisation domain LPH58_RS01660 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LPH58_RS01660 PF00696 Amino acid kinase family LPH58_RS01670 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH58_RS01675 PF00206 Lyase LPH58_RS01685 PF00696 Amino acid kinase family LPH58_RS01685 PF01472 PUA domain LPH58_RS01690 PF00171 Aldehyde dehydrogenase family LPH58_RS01700 PF02796 Helix-turn-helix domain of resolvase LPH58_RS01700 PF00239 Resolvase, N terminal domain LPH58_RS01725 PF00239 Resolvase, N terminal domain LPH58_RS01725 PF02796 Helix-turn-helix domain of resolvase LPH58_RS01740 PF13700 Domain of unknown function (DUF4158) LPH58_RS01740 PF01526 Tn3 transposase DDE domain LPH58_RS01770 PF03524 Conjugal transfer protein LPH58_RS01810 PF01593 Flavin containing amine oxidoreductase LPH58_RS01820 PF02627 Carboxymuconolactone decarboxylase family LPH58_RS01840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_RS01840 PF03466 LysR substrate binding domain LPH58_RS01845 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LPH58_RS01850 PF09386 Antitoxin ParD LPH58_RS01855 PF02796 Helix-turn-helix domain of resolvase LPH58_RS01855 PF00239 Resolvase, N terminal domain LPH58_RS01880 PF02796 Helix-turn-helix domain of resolvase LPH58_RS01880 PF00239 Resolvase, N terminal domain LPH58_RS01920 PF06594 Haemolysin-type calcium binding protein related domain LPH58_RS01920 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_RS01925 PF14437 MafB19-like deaminase LPH58_RS01930 PF01325 Iron dependent repressor, N-terminal DNA binding domain LPH58_RS01930 PF02742 Iron dependent repressor, metal binding and dimerisation domain LPH58_RS01935 PF01566 Natural resistance-associated macrophage protein LPH58_RS01950 PF04376 Arginine-tRNA-protein transferase, N terminus LPH58_RS01950 PF04377 Arginine-tRNA-protein transferase, C terminus LPH58_RS01985 PF03797 Autotransporter beta-domain LPH58_RS01985 PF00082 Subtilase family LPH58_RS01985 PF12951 Passenger-associated-transport-repeat LPH58_RS02015 PF01553 Acyltransferase LPH58_RS02030 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LPH58_RS02030 PF05221 S-adenosyl-L-homocysteine hydrolase LPH58_RS02045 PF01351 Ribonuclease HII LPH58_RS02050 PF02684 Lipid-A-disaccharide synthetase LPH58_RS02055 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_RS02055 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LPH58_RS02060 PF07977 FabA-like domain LPH58_RS02065 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LPH58_RS02065 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_RS02070 PF01103 Surface antigen LPH58_RS02070 PF07244 Surface antigen variable number repeat LPH58_RS02075 PF02163 Peptidase family M50 LPH58_RS02075 PF17820 PDZ domain LPH58_RS02080 PF13288 DXP reductoisomerase C-terminal domain LPH58_RS02080 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LPH58_RS02080 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LPH58_RS02090 PF01255 Putative undecaprenyl diphosphate synthase LPH58_RS02095 PF01765 Ribosome recycling factor LPH58_RS02125 PF04305 Protein of unknown function (DUF455) LPH58_RS02130 PF00696 Amino acid kinase family LPH58_RS02205 PF01081 KDPG and KHG aldolase LPH58_RS02210 PF00920 Dehydratase family LPH58_RS02215 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LPH58_RS02220 PF02685 Glucokinase LPH58_RS02225 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LPH58_RS02225 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LPH58_RS02230 PF17912 MalK OB fold domain LPH58_RS02230 PF00005 ABC transporter LPH58_RS02245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH58_RS02250 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LPH58_RS02255 PF02910 Fumarate reductase flavoprotein C-term LPH58_RS02255 PF00890 FAD binding domain LPH58_RS02260 PF13237 4Fe-4S dicluster domain LPH58_RS02260 PF13085 2Fe-2S iron-sulfur cluster binding domain LPH58_RS02265 PF03937 Flavinator of succinate dehydrogenase LPH58_RS02275 PF12704 MacB-like periplasmic core domain LPH58_RS02275 PF02687 FtsX-like permease family LPH58_RS02280 PF00005 ABC transporter LPH58_RS02285 PF03772 Competence protein LPH58_RS02285 PF00753 Metallo-beta-lactamase superfamily LPH58_RS02300 PF00005 ABC transporter LPH58_RS02300 PF00664 ABC transporter transmembrane region LPH58_RS02305 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LPH58_RS02310 PF01883 Iron-sulfur cluster assembly protein LPH58_RS02310 PF10609 NUBPL iron-transfer P-loop NTPase LPH58_RS02325 PF13091 PLD-like domain LPH58_RS02350 PF03358 NADPH-dependent FMN reductase LPH58_RS02355 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LPH58_RS02355 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain LPH58_RS02370 PF01300 Telomere recombination LPH58_RS02375 PF01131 DNA topoisomerase LPH58_RS02375 PF13368 Topoisomerase C-terminal repeat LPH58_RS02375 PF01751 Toprim domain LPH58_RS02385 PF04361 Protein of unknown function (DUF494) LPH58_RS02390 PF17782 DprA winged helix domain LPH58_RS02390 PF02481 DNA recombination-mediator protein A LPH58_RS02400 PF01327 Polypeptide deformylase LPH58_RS02405 PF00551 Formyl transferase LPH58_RS02405 PF02911 Formyl transferase, C-terminal domain LPH58_RS02410 PF01029 NusB family LPH58_RS02410 PF01189 16S rRNA methyltransferase RsmB/F LPH58_RS02415 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LPH58_RS02430 PF00114 Pilin (bacterial filament) LPH58_RS02430 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS02550 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH58_RS02550 PF00476 DNA polymerase family A LPH58_RS02550 PF01612 3'-5' exonuclease LPH58_RS02550 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH58_RS02555 PF05173 Dihydrodipicolinate reductase, C-terminus LPH58_RS02555 PF01113 Dihydrodipicolinate reductase, N-terminus LPH58_RS02560 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LPH58_RS02560 PF00117 Glutamine amidotransferase class-I LPH58_RS02565 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LPH58_RS02565 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LPH58_RS02565 PF02142 MGS-like domain LPH58_RS02570 PF03449 Transcription elongation factor, N-terminal LPH58_RS02570 PF01272 Transcription elongation factor, GreA/GreB, C-term LPH58_RS02580 PF17768 RecJ OB domain LPH58_RS02580 PF02272 DHHA1 domain LPH58_RS02580 PF01368 DHH family LPH58_RS02590 PF00152 tRNA synthetases class II (D, K and N) LPH58_RS02590 PF01336 OB-fold nucleic acid binding domain LPH58_RS02595 PF00072 Response regulator receiver domain LPH58_RS02600 PF00072 Response regulator receiver domain LPH58_RS02600 PF01627 Hpt domain LPH58_RS02600 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS02600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS02605 PF00378 Enoyl-CoA hydratase/isomerase LPH58_RS02610 PF00696 Amino acid kinase family LPH58_RS02610 PF01842 ACT domain LPH58_RS02620 PF08245 Mur ligase middle domain LPH58_RS02640 PF00293 NUDIX domain LPH58_RS02650 PF02219 Methylenetetrahydrofolate reductase LPH58_RS02660 PF02545 Maf-like protein LPH58_RS02665 PF10150 Ribonuclease E/G family LPH58_RS02665 PF00575 S1 RNA binding domain LPH58_RS02675 PF01523 Putative modulator of DNA gyrase LPH58_RS02680 PF04751 Protein of unknown function (DUF615) LPH58_RS02685 PF01523 Putative modulator of DNA gyrase LPH58_RS02715 PF03466 LysR substrate binding domain LPH58_RS02715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_RS02720 PF03358 NADPH-dependent FMN reductase LPH58_RS02730 PF00107 Zinc-binding dehydrogenase LPH58_RS02730 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_RS02745 PF00248 Aldo/keto reductase family LPH58_RS02760 PF12804 MobA-like NTP transferase domain LPH58_RS02760 PF14602 Hexapeptide repeat of succinyl-transferase LPH58_RS02760 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_RS02770 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LPH58_RS02770 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LPH58_RS02775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH58_RS02775 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH58_RS02780 PF00231 ATP synthase LPH58_RS02785 PF00306 ATP synthase alpha/beta chain, C terminal domain LPH58_RS02785 PF02874 ATP synthase alpha/beta family, beta-barrel domain LPH58_RS02785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH58_RS02790 PF00213 ATP synthase delta (OSCP) subunit LPH58_RS02795 PF00430 ATP synthase B/B' CF(0) LPH58_RS02800 PF00137 ATP synthase subunit C LPH58_RS02805 PF00119 ATP synthase A chain LPH58_RS02815 PF00338 Ribosomal protein S10p/S20e LPH58_RS02820 PF00297 Ribosomal protein L3 LPH58_RS02825 PF00573 Ribosomal protein L4/L1 family LPH58_RS02830 PF00276 Ribosomal protein L23 LPH58_RS02835 PF03947 Ribosomal Proteins L2, C-terminal domain LPH58_RS02835 PF00181 Ribosomal Proteins L2, RNA binding domain LPH58_RS02840 PF00203 Ribosomal protein S19 LPH58_RS02845 PF00237 Ribosomal protein L22p/L17e LPH58_RS02850 PF00189 Ribosomal protein S3, C-terminal domain LPH58_RS02850 PF07650 KH domain LPH58_RS02855 PF00252 Ribosomal protein L16p/L10e LPH58_RS02860 PF00831 Ribosomal L29 protein LPH58_RS02865 PF00366 Ribosomal protein S17 LPH58_RS02870 PF00238 Ribosomal protein L14p/L23e LPH58_RS02875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LPH58_RS02875 PF00467 KOW motif LPH58_RS02880 PF00673 ribosomal L5P family C-terminus LPH58_RS02880 PF00281 Ribosomal protein L5 LPH58_RS02885 PF00253 Ribosomal protein S14p/S29e LPH58_RS02890 PF00410 Ribosomal protein S8 LPH58_RS02895 PF00347 Ribosomal protein L6 LPH58_RS02900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LPH58_RS02905 PF03719 Ribosomal protein S5, C-terminal domain LPH58_RS02905 PF00333 Ribosomal protein S5, N-terminal domain LPH58_RS02910 PF00327 Ribosomal protein L30p/L7e LPH58_RS02915 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LPH58_RS02920 PF00344 SecY translocase LPH58_RS02925 PF00416 Ribosomal protein S13/S18 LPH58_RS02930 PF00411 Ribosomal protein S11 LPH58_RS02935 PF00163 Ribosomal protein S4/S9 N-terminal domain LPH58_RS02935 PF01479 S4 domain LPH58_RS02940 PF01000 RNA polymerase Rpb3/RpoA insert domain LPH58_RS02940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LPH58_RS02940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LPH58_RS02945 PF01196 Ribosomal protein L17 LPH58_RS02950 PF04380 Membrane fusogenic activity LPH58_RS02955 PF01078 Magnesium chelatase, subunit ChlI LPH58_RS02955 PF13335 Magnesium chelatase, subunit ChlI C-terminal LPH58_RS02960 PF00561 alpha/beta hydrolase fold LPH58_RS02975 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH58_RS02975 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH58_RS02975 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH58_RS02990 PF05697 Bacterial trigger factor protein (TF) LPH58_RS02990 PF05698 Bacterial trigger factor protein (TF) C-terminus LPH58_RS02995 PF00574 Clp protease LPH58_RS03000 PF06689 ClpX C4-type zinc finger LPH58_RS03000 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_RS03000 PF07724 AAA domain (Cdc48 subfamily) LPH58_RS03005 PF02190 ATP-dependent protease La (LON) substrate-binding domain LPH58_RS03005 PF05362 Lon protease (S16) C-terminal proteolytic domain LPH58_RS03005 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_RS03010 PF00216 Bacterial DNA-binding protein LPH58_RS03035 PF02867 Ribonucleotide reductase, barrel domain LPH58_RS03035 PF00317 Ribonucleotide reductase, all-alpha domain LPH58_RS03035 PF03477 ATP cone domain LPH58_RS03040 PF00268 Ribonucleotide reductase, small chain LPH58_RS03065 PF01479 S4 domain LPH58_RS03065 PF00849 RNA pseudouridylate synthase LPH58_RS03070 PF13419 Haloacid dehalogenase-like hydrolase LPH58_RS03080 PF00830 Ribosomal L28 family LPH58_RS03085 PF00471 Ribosomal protein L33 LPH58_RS03090 PF13396 Phospholipase_D-nuclease N-terminal LPH58_RS03090 PF13091 PLD-like domain LPH58_RS03105 PF00114 Pilin (bacterial filament) LPH58_RS03105 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS03125 PF01612 3'-5' exonuclease LPH58_RS03125 PF00476 DNA polymerase family A LPH58_RS03125 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH58_RS03125 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH58_RS03145 PF00959 Phage lysozyme LPH58_RS03165 PF01555 DNA methylase LPH58_RS03185 PF00043 Glutathione S-transferase, C-terminal domain LPH58_RS03185 PF02798 Glutathione S-transferase, N-terminal domain LPH58_RS03190 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LPH58_RS03190 PF00056 lactate/malate dehydrogenase, NAD binding domain LPH58_RS03195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LPH58_RS03200 PF00679 Elongation factor G C-terminus LPH58_RS03200 PF03144 Elongation factor Tu domain 2 LPH58_RS03200 PF00009 Elongation factor Tu GTP binding domain LPH58_RS03215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_RS03215 PF00529 HlyD membrane-fusion protein of T1SS LPH58_RS03240 PF03412 Peptidase C39 family LPH58_RS03240 PF00664 ABC transporter transmembrane region LPH58_RS03240 PF00005 ABC transporter LPH58_RS03245 PF01061 ABC-2 type transporter LPH58_RS03250 PF00005 ABC transporter LPH58_RS03255 PF05567 Neisseria PilC beta-propeller domain LPH58_RS03270 PF00270 DEAD/DEAH box helicase LPH58_RS03270 PF04408 Helicase associated domain (HA2) LPH58_RS03270 PF00271 Helicase conserved C-terminal domain LPH58_RS03270 PF08482 ATP-dependent helicase C-terminal LPH58_RS03280 PF13185 GAF domain LPH58_RS03285 PF01103 Surface antigen LPH58_RS03285 PF17243 POTRA domain TamA domain 1 LPH58_RS03290 PF04357 TamB, inner membrane protein subunit of TAM complex LPH58_RS03305 PF00285 Citrate synthase, C-terminal domain LPH58_RS03310 PF00694 Aconitase C-terminal domain LPH58_RS03310 PF00330 Aconitase family (aconitate hydratase) LPH58_RS03315 PF04303 PrpF protein LPH58_RS03335 PF17962 Bacterial macroglobulin domain 6 LPH58_RS03335 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LPH58_RS03335 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LPH58_RS03335 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LPH58_RS03335 PF07703 Alpha-2-macroglobulin bait region domain LPH58_RS03335 PF00207 Alpha-2-macroglobulin family LPH58_RS03335 PF01835 MG2 domain LPH58_RS03335 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LPH58_RS03340 PF02583 Metal-sensitive transcriptional repressor LPH58_RS03345 PF03824 High-affinity nickel-transport protein LPH58_RS03350 PF07859 alpha/beta hydrolase fold LPH58_RS03355 PF12833 Helix-turn-helix domain LPH58_RS03355 PF12852 Cupin LPH58_RS03370 PF16485 Protealysin propeptide LPH58_RS03370 PF02868 Thermolysin metallopeptidase, alpha-helical domain LPH58_RS03370 PF01447 Thermolysin metallopeptidase, catalytic domain LPH58_RS03375 PF00929 Exonuclease LPH58_RS03380 PF05552 Conserved TM helix LPH58_RS03380 PF00924 Mechanosensitive ion channel LPH58_RS03385 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LPH58_RS03385 PF02896 PEP-utilising enzyme, TIM barrel domain LPH58_RS03385 PF00391 PEP-utilising enzyme, mobile domain LPH58_RS03390 PF03618 Kinase/pyrophosphorylase LPH58_RS03410 PF04286 Protein of unknown function (DUF445) LPH58_RS03425 PF04359 Protein of unknown function (DUF493) LPH58_RS03430 PF03099 Biotin/lipoate A/B protein ligase family LPH58_RS03435 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LPH58_RS03435 PF04055 Radical SAM superfamily LPH58_RS03465 PF00571 CBS domain LPH58_RS03465 PF03471 Transporter associated domain LPH58_RS03465 PF01595 Cyclin M transmembrane N-terminal domain LPH58_RS03480 PF00204 DNA gyrase B LPH58_RS03480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS03480 PF01751 Toprim domain LPH58_RS03480 PF00986 DNA gyrase B subunit, carboxyl terminus LPH58_RS03490 PF06418 CTP synthase N-terminus LPH58_RS03490 PF00117 Glutamine amidotransferase class-I LPH58_RS03495 PF00793 DAHP synthetase I family LPH58_RS03500 PF00113 Enolase, C-terminal TIM barrel domain LPH58_RS03500 PF03952 Enolase, N-terminal domain LPH58_RS03505 PF04977 Septum formation initiator LPH58_RS03510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LPH58_RS03515 PF02542 YgbB family LPH58_RS03520 PF01713 Smr domain LPH58_RS03545 PF02470 MlaD protein LPH58_RS03545 PF03886 ABC-type transport auxiliary lipoprotein component LPH58_RS03550 PF00005 ABC transporter LPH58_RS03555 PF02405 Permease MlaE LPH58_RS03630 PF04093 rod shape-determining protein MreD LPH58_RS03635 PF00905 Penicillin binding protein transpeptidase domain LPH58_RS03635 PF03717 Penicillin-binding Protein dimerisation domain LPH58_RS03640 PF01098 Cell cycle protein LPH58_RS03645 PF02547 Queuosine biosynthesis protein LPH58_RS03650 PF04607 Region found in RelA / SpoT proteins LPH58_RS03650 PF02824 TGS domain LPH58_RS03650 PF13291 ACT domain LPH58_RS03665 PF03776 Septum formation topological specificity factor MinE LPH58_RS03670 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LPH58_RS03675 PF05209 Septum formation inhibitor MinC, N-terminal domain LPH58_RS03675 PF03775 Septum formation inhibitor MinC, C-terminal domain LPH58_RS03695 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH58_RS03705 PF01292 Prokaryotic cytochrome b561 LPH58_RS03710 PF04264 YceI-like domain LPH58_RS03715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS03715 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS03715 PF09308 LuxQ, periplasmic LPH58_RS03715 PF00072 Response regulator receiver domain LPH58_RS03725 PF01208 Uroporphyrinogen decarboxylase (URO-D) LPH58_RS03730 PF01761 3-dehydroquinate synthase LPH58_RS03735 PF01202 Shikimate kinase LPH58_RS03740 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LPH58_RS03740 PF01243 Pyridoxamine 5'-phosphate oxidase LPH58_RS03750 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH58_RS03750 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LPH58_RS03760 PF03932 CutC family LPH58_RS03780 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS03785 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS03790 PF00005 ABC transporter LPH58_RS03790 PF12857 TOBE-like domain LPH58_RS03830 PF01381 Helix-turn-helix LPH58_RS03905 PF10065 Uncharacterized conserved protein (DUF2303) LPH58_RS03930 PF04545 Sigma-70, region 4 LPH58_RS03930 PF04539 Sigma-70 region 3 LPH58_RS03930 PF04542 Sigma-70 region 2 LPH58_RS03930 PF00140 Sigma-70 factor, region 1.2 LPH58_RS03930 PF03979 Sigma-70 factor, region 1.1 LPH58_RS03930 PF04546 Sigma-70, non-essential region LPH58_RS03935 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH58_RS03935 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH58_RS03945 PF02321 Outer membrane efflux protein LPH58_RS03950 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_RS03950 PF00529 HlyD membrane-fusion protein of T1SS LPH58_RS03955 PF07690 Major Facilitator Superfamily LPH58_RS03960 PF12697 Alpha/beta hydrolase family LPH58_RS03965 PF00155 Aminotransferase class I and II LPH58_RS03975 PF01040 UbiA prenyltransferase family LPH58_RS03980 PF00753 Metallo-beta-lactamase superfamily LPH58_RS03985 PF12627 Probable RNA and SrmB- binding site of polymerase A LPH58_RS03985 PF01743 Poly A polymerase head domain LPH58_RS03985 PF01966 HD domain LPH58_RS03990 PF01464 Transglycosylase SLT domain LPH58_RS03990 PF14718 Soluble lytic murein transglycosylase L domain LPH58_RS04000 PF02666 Phosphatidylserine decarboxylase LPH58_RS04055 PF00456 Transketolase, thiamine diphosphate binding domain LPH58_RS04055 PF17831 Pyruvate dehydrogenase E1 component middle domain LPH58_RS04060 PF00698 Acyl transferase domain LPH58_RS04070 PF00550 Phosphopantetheine attachment site LPH58_RS04075 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH58_RS04075 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH58_RS04080 PF00425 chorismate binding enzyme LPH58_RS04080 PF04715 Anthranilate synthase component I, N terminal region LPH58_RS04085 PF02618 YceG-like family LPH58_RS04090 PF09115 DNA polymerase III, delta subunit, C terminal LPH58_RS04110 PF00459 Inositol monophosphatase family LPH58_RS04115 PF00588 SpoU rRNA Methylase family LPH58_RS04120 PF04055 Radical SAM superfamily LPH58_RS04125 PF08207 Elongation factor P (EF-P) KOW-like domain LPH58_RS04125 PF09285 Elongation factor P, C-terminal LPH58_RS04125 PF01132 Elongation factor P (EF-P) OB domain LPH58_RS04130 PF01979 Amidohydrolase family LPH58_RS04140 PF13419 Haloacid dehalogenase-like hydrolase LPH58_RS04150 PF00561 alpha/beta hydrolase fold LPH58_RS04155 PF08534 Redoxin LPH58_RS04185 PF00155 Aminotransferase class I and II LPH58_RS04190 PF00795 Carbon-nitrogen hydrolase LPH58_RS04200 PF00849 RNA pseudouridylate synthase LPH58_RS04200 PF01479 S4 domain LPH58_RS04205 PF04079 Segregation and condensation complex subunit ScpB LPH58_RS04210 PF02616 Segregation and condensation protein ScpA LPH58_RS04240 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS04245 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS04260 PF00795 Carbon-nitrogen hydrolase LPH58_RS04265 PF04371 Porphyromonas-type peptidyl-arginine deiminase LPH58_RS04275 PF00444 Ribosomal protein L36 LPH58_RS04280 PF02224 Cytidylate kinase LPH58_RS04285 PF00575 S1 RNA binding domain LPH58_RS04290 PF00216 Bacterial DNA-binding protein LPH58_RS04300 PF18073 Rubredoxin metal binding domain LPH58_RS04305 PF00953 Glycosyl transferase family 4 LPH58_RS04310 PF02719 Polysaccharide biosynthesis protein LPH58_RS04315 PF00483 Nucleotidyl transferase LPH58_RS04320 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LPH58_RS04320 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LPH58_RS04325 PF00478 IMP dehydrogenase / GMP reductase domain LPH58_RS04325 PF00571 CBS domain LPH58_RS04330 PF02540 NAD synthase LPH58_RS04330 PF00958 GMP synthase C terminal domain LPH58_RS04330 PF00117 Glutamine amidotransferase class-I LPH58_RS04380 PF09571 XcyI restriction endonuclease LPH58_RS04395 PF00005 ABC transporter LPH58_RS04395 PF17760 UvrA interaction domain LPH58_RS04395 PF17755 UvrA DNA-binding domain LPH58_RS04400 PF00829 Ribosomal prokaryotic L21 protein LPH58_RS04405 PF01016 Ribosomal L27 protein LPH58_RS04410 PF01926 50S ribosome-binding GTPase LPH58_RS04410 PF01018 GTP1/OBG LPH58_RS04415 PF01649 Ribosomal protein S20 LPH58_RS04420 PF03023 Lipid II flippase MurJ LPH58_RS04425 PF01687 Riboflavin kinase LPH58_RS04425 PF06574 FAD synthetase LPH58_RS04430 PF06827 Zinc finger found in FPG and IleRS LPH58_RS04430 PF00133 tRNA synthetases class I (I, L, M and V) LPH58_RS04430 PF08264 Anticodon-binding domain of tRNA LPH58_RS04435 PF01252 Signal peptidase (SPase) II LPH58_RS04440 PF02401 LytB protein LPH58_RS04510 PF13087 AAA domain LPH58_RS04510 PF13091 PLD-like domain LPH58_RS04515 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_RS04515 PF06594 Haemolysin-type calcium binding protein related domain LPH58_RS04580 PF00664 ABC transporter transmembrane region LPH58_RS04580 PF00005 ABC transporter LPH58_RS04580 PF03412 Peptidase C39 family LPH58_RS04585 PF00155 Aminotransferase class I and II LPH58_RS04590 PF01522 Polysaccharide deacetylase LPH58_RS04595 PF00462 Glutaredoxin LPH58_RS04605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_RS04605 PF03466 LysR substrate binding domain LPH58_RS04615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LPH58_RS04625 PF00857 Isochorismatase family LPH58_RS04635 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_RS04635 PF00107 Zinc-binding dehydrogenase LPH58_RS04640 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_RS04640 PF00107 Zinc-binding dehydrogenase LPH58_RS04660 PF00873 AcrB/AcrD/AcrF family LPH58_RS04665 PF00873 AcrB/AcrD/AcrF family LPH58_RS04670 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_RS04675 PF14489 QueF-like protein LPH58_RS04675 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LPH58_RS04690 PF00330 Aconitase family (aconitate hydratase) LPH58_RS04695 PF00694 Aconitase C-terminal domain LPH58_RS04700 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH58_RS04715 PF02397 Bacterial sugar transferase LPH58_RS04730 PF13439 Glycosyltransferase Family 4 LPH58_RS04730 PF00534 Glycosyl transferases group 1 LPH58_RS04740 PF01943 Polysaccharide biosynthesis protein LPH58_RS04755 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS04755 PF00072 Response regulator receiver domain LPH58_RS04760 PF05958 tRNA (Uracil-5-)-methyltransferase LPH58_RS04765 PF01928 CYTH domain LPH58_RS04770 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH58_RS04775 PF00156 Phosphoribosyl transferase domain LPH58_RS04780 PF01048 Phosphorylase superfamily LPH58_RS04785 PF00313 'Cold-shock' DNA-binding domain LPH58_RS04795 PF01668 SmpB protein LPH58_RS04805 PF03658 RnfH family Ubiquitin LPH58_RS04810 PF04355 SmpA / OmlA family LPH58_RS04815 PF01475 Ferric uptake regulator family LPH58_RS04820 PF02463 RecF/RecN/SMC N terminal domain LPH58_RS04825 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LPH58_RS04825 PF01628 HrcA protein C terminal domain LPH58_RS04830 PF01025 GrpE LPH58_RS04835 PF00012 Hsp70 protein LPH58_RS04840 PF01556 DnaJ C terminal domain LPH58_RS04840 PF00684 DnaJ central domain LPH58_RS04840 PF00226 DnaJ domain LPH58_RS04850 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS04850 PF00072 Response regulator receiver domain LPH58_RS04855 PF01219 Prokaryotic diacylglycerol kinase LPH58_RS04860 PF01790 Prolipoprotein diacylglyceryl transferase LPH58_RS04865 PF00303 Thymidylate synthase LPH58_RS04870 PF00186 Dihydrofolate reductase LPH58_RS04875 PF13700 Domain of unknown function (DUF4158) LPH58_RS04875 PF01526 Tn3 transposase DDE domain LPH58_RS04885 PF00072 Response regulator receiver domain LPH58_RS04885 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS04890 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS04890 PF13492 GAF domain LPH58_RS04890 PF02702 Osmosensitive K+ channel His kinase sensor domain LPH58_RS04890 PF13493 Domain of unknown function (DUF4118) LPH58_RS04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS04895 PF02669 K+-transporting ATPase, c chain LPH58_RS04905 PF03814 Potassium-transporting ATPase A subunit LPH58_RS04920 PF00149 Calcineurin-like phosphoesterase LPH58_RS04925 PF04379 ApaG domain LPH58_RS04930 PF00398 Ribosomal RNA adenine dimethylase LPH58_RS04935 PF00929 Exonuclease LPH58_RS04940 PF01895 PhoU domain LPH58_RS04945 PF00005 ABC transporter LPH58_RS04950 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS04960 PF12849 PBP superfamily domain LPH58_RS04965 PF00999 Sodium/hydrogen exchanger family LPH58_RS04965 PF02254 TrkA-N domain LPH58_RS04970 PF00593 TonB dependent receptor LPH58_RS04970 PF07715 TonB-dependent Receptor Plug Domain LPH58_RS04975 PF01323 DSBA-like thioredoxin domain LPH58_RS04985 PF12848 ABC transporter LPH58_RS04985 PF00005 ABC transporter LPH58_RS05000 PF01066 CDP-alcohol phosphatidyltransferase LPH58_RS05005 PF01541 GIY-YIG catalytic domain LPH58_RS05005 PF02151 UvrB/uvrC motif LPH58_RS05005 PF08459 UvrC Helix-hairpin-helix N-terminal LPH58_RS05010 PF01451 Low molecular weight phosphotyrosine protein phosphatase LPH58_RS05015 PF02348 Cytidylyltransferase LPH58_RS05020 PF10609 NUBPL iron-transfer P-loop NTPase LPH58_RS05025 PF00202 Aminotransferase class-III LPH58_RS05035 PF00490 Delta-aminolevulinic acid dehydratase LPH58_RS05045 PF12146 Serine aminopeptidase, S33 LPH58_RS05060 PF13932 GidA associated domain LPH58_RS05060 PF01134 Glucose inhibited division protein A LPH58_RS05080 PF13649 Methyltransferase domain LPH58_RS05100 PF02649 Type I GTP cyclohydrolase folE2 LPH58_RS05105 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_RS05110 PF00873 AcrB/AcrD/AcrF family LPH58_RS05115 PF00529 HlyD membrane-fusion protein of T1SS LPH58_RS05115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LPH58_RS05120 PF05088 Bacterial NAD-glutamate dehydrogenase LPH58_RS05125 PF01513 ATP-NAD kinase LPH58_RS05145 PF12706 Beta-lactamase superfamily domain LPH58_RS05155 PF00929 Exonuclease LPH58_RS05155 PF08411 Exonuclease C-terminal LPH58_RS05175 PF00999 Sodium/hydrogen exchanger family LPH58_RS05185 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LPH58_RS05195 PF01812 5-formyltetrahydrofolate cyclo-ligase family LPH58_RS05215 PF03695 Uncharacterised protein family (UPF0149) LPH58_RS05220 PF00557 Metallopeptidase family M24 LPH58_RS05220 PF05195 Aminopeptidase P, N-terminal domain LPH58_RS05225 PF00293 NUDIX domain LPH58_RS05260 PF01063 Amino-transferase class IV LPH58_RS05275 PF02954 Bacterial regulatory protein, Fis family LPH58_RS05285 PF01381 Helix-turn-helix LPH58_RS05300 PF00535 Glycosyl transferase family 2 LPH58_RS05310 PF00925 GTP cyclohydrolase II LPH58_RS05320 PF08534 Redoxin LPH58_RS05345 PF00959 Phage lysozyme LPH58_RS05365 PF01367 5'-3' exonuclease, C-terminal SAM fold LPH58_RS05365 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LPH58_RS05365 PF00476 DNA polymerase family A LPH58_RS05365 PF01612 3'-5' exonuclease LPH58_RS05390 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS05390 PF00114 Pilin (bacterial filament) LPH58_RS05405 PF00753 Metallo-beta-lactamase superfamily LPH58_RS05405 PF16123 Hydroxyacylglutathione hydrolase C-terminus LPH58_RS05415 PF00075 RNase H LPH58_RS05420 PF00929 Exonuclease LPH58_RS05440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LPH58_RS05450 PF13632 Glycosyl transferase family group 2 LPH58_RS05455 PF02230 Phospholipase/Carboxylesterase LPH58_RS05460 PF06580 Histidine kinase LPH58_RS05460 PF07694 5TMR of 5TMR-LYT LPH58_RS05465 PF04397 LytTr DNA-binding domain LPH58_RS05465 PF00072 Response regulator receiver domain LPH58_RS05470 PF03900 Porphobilinogen deaminase, C-terminal domain LPH58_RS05470 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LPH58_RS05485 PF00437 Type II/IV secretion system protein LPH58_RS05490 PF00437 Type II/IV secretion system protein LPH58_RS05505 PF00535 Glycosyl transferase family 2 LPH58_RS05515 PF02801 Beta-ketoacyl synthase, C-terminal domain LPH58_RS05515 PF00109 Beta-ketoacyl synthase, N-terminal domain LPH58_RS05530 PF09924 Uncharacterised conserved protein (DUF2156) LPH58_RS05530 PF03706 Lysylphosphatidylglycerol synthase TM region LPH58_RS05535 PF01042 Endoribonuclease L-PSP LPH58_RS05550 PF01430 Hsp33 protein LPH58_RS05555 PF00912 Transglycosylase LPH58_RS05560 PF00488 MutS domain V LPH58_RS05560 PF05190 MutS family domain IV LPH58_RS05560 PF05192 MutS domain III LPH58_RS05560 PF05188 MutS domain II LPH58_RS05560 PF01624 MutS domain I LPH58_RS05565 PF01168 Alanine racemase, N-terminal domain LPH58_RS05580 PF08279 HTH domain LPH58_RS05580 PF03099 Biotin/lipoate A/B protein ligase family LPH58_RS05580 PF02237 Biotin protein ligase C terminal domain LPH58_RS05585 PF03309 Type III pantothenate kinase LPH58_RS05615 PF01183 Glycosyl hydrolases family 25 LPH58_RS05635 PF01381 Helix-turn-helix LPH58_RS05650 PF00114 Pilin (bacterial filament) LPH58_RS05650 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS05750 PF00589 Phage integrase family LPH58_RS05765 PF00959 Phage lysozyme LPH58_RS05780 PF00574 Clp protease LPH58_RS05820 PF01022 Bacterial regulatory protein, arsR family LPH58_RS05835 PF00873 AcrB/AcrD/AcrF family LPH58_RS05860 PF00581 Rhodanese-like domain LPH58_RS05865 PF02556 Preprotein translocase subunit SecB LPH58_RS05870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LPH58_RS05870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LPH58_RS05895 PF12169 DNA polymerase III subunits gamma and tau domain III LPH58_RS05895 PF12170 DNA polymerase III tau subunit V interacting with alpha LPH58_RS05900 PF02575 YbaB/EbfC DNA-binding family LPH58_RS05905 PF02132 RecR protein LPH58_RS05905 PF13662 Toprim domain LPH58_RS05910 PF01230 HIT domain LPH58_RS05920 PF11992 Domain of unknown function (DUF3488) LPH58_RS05920 PF13559 Domain of unknown function (DUF4129) LPH58_RS05920 PF01841 Transglutaminase-like superfamily LPH58_RS05930 PF07726 ATPase family associated with various cellular activities (AAA) LPH58_RS05930 PF17863 AAA lid domain LPH58_RS05940 PF02620 Large ribosomal RNA subunit accumulation protein YceD LPH58_RS05945 PF01783 Ribosomal L32p protein family LPH58_RS05950 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH58_RS05950 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH58_RS05965 PF00553 Cellulose binding domain LPH58_RS05965 PF00041 Fibronectin type III domain LPH58_RS05965 PF01341 Glycosyl hydrolases family 6 LPH58_RS05970 PF00682 HMGL-like LPH58_RS05970 PF08502 LeuA allosteric (dimerisation) domain LPH58_RS05975 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_RS05985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LPH58_RS05985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LPH58_RS05985 PF00205 Thiamine pyrophosphate enzyme, central domain LPH58_RS05990 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LPH58_RS05990 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LPH58_RS05995 PF17804 Tail specific protease N-terminal domain LPH58_RS05995 PF03572 Peptidase family S41 LPH58_RS05995 PF00595 PDZ domain LPH58_RS05995 PF11818 C-terminal domain of tail specific protease (DUF3340) LPH58_RS06000 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LPH58_RS06005 PF02566 OsmC-like protein LPH58_RS06010 PF03969 AFG1-like ATPase LPH58_RS06015 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH58_RS06020 PF07683 Cobalamin synthesis protein cobW C-terminal domain LPH58_RS06020 PF02492 CobW/HypB/UreG, nucleotide-binding domain LPH58_RS06030 PF00551 Formyl transferase LPH58_RS06040 PF03109 ABC1 family LPH58_RS06050 PF12241 Trans-2-enoyl-CoA reductase catalytic region LPH58_RS06050 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LPH58_RS06050 PF07055 Enoyl reductase FAD binding domain LPH58_RS06070 PF00881 Nitroreductase family LPH58_RS06075 PF04264 YceI-like domain LPH58_RS06080 PF02673 Bacitracin resistance protein BacA LPH58_RS06085 PF03951 Glutamine synthetase, beta-Grasp domain LPH58_RS06085 PF00120 Glutamine synthetase, catalytic domain LPH58_RS06090 PF00543 Nitrogen regulatory protein P-II LPH58_RS06095 PF00909 Ammonium Transporter Family LPH58_RS06110 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LPH58_RS06110 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LPH58_RS06115 PF02910 Fumarate reductase flavoprotein C-term LPH58_RS06115 PF00890 FAD binding domain LPH58_RS06120 PF02445 Quinolinate synthetase A protein LPH58_RS06125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH58_RS06125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH58_RS06130 PF01026 TatD related DNase LPH58_RS06215 PF01850 PIN domain LPH58_RS06225 PF00300 Histidine phosphatase superfamily (branch 1) LPH58_RS06230 PF10459 Peptidase S46 LPH58_RS06235 PF01964 Radical SAM ThiC family LPH58_RS06235 PF13667 ThiC-associated domain LPH58_RS06240 PF00175 Oxidoreductase NAD-binding domain LPH58_RS06240 PF00970 Oxidoreductase FAD-binding domain LPH58_RS06245 PF00255 Glutathione peroxidase LPH58_RS06250 PF00854 POT family LPH58_RS06255 PF04493 Endonuclease V LPH58_RS06260 PF00300 Histidine phosphatase superfamily (branch 1) LPH58_RS06265 PF04055 Radical SAM superfamily LPH58_RS06275 PF00691 OmpA family LPH58_RS06280 PF04052 TolB amino-terminal domain LPH58_RS06280 PF07676 WD40-like Beta Propeller Repeat LPH58_RS06290 PF02472 Biopolymer transport protein ExbD/TolR LPH58_RS06295 PF01618 MotA/TolQ/ExbB proton channel family LPH58_RS06300 PF03061 Thioesterase superfamily LPH58_RS06305 PF17864 RuvB AAA lid domain LPH58_RS06305 PF05491 RuvB C-terminal winged helix domain LPH58_RS06305 PF05496 Holliday junction DNA helicase RuvB P-loop domain LPH58_RS06310 PF02705 K+ potassium transporter LPH58_RS06315 PF07499 RuvA, C-terminal domain LPH58_RS06315 PF01330 RuvA N terminal domain LPH58_RS06320 PF02075 Crossover junction endodeoxyribonuclease RuvC LPH58_RS06325 PF01709 Transcriptional regulator LPH58_RS06335 PF04362 Bacterial Fe(2+) trafficking LPH58_RS06340 PF14815 NUDIX domain LPH58_RS06340 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH58_RS06340 PF00633 Helix-hairpin-helix motif LPH58_RS06345 PF00448 SRP54-type protein, GTPase domain LPH58_RS06345 PF02881 SRP54-type protein, helical bundle domain LPH58_RS06370 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ LPH58_RS06375 PF04221 RelB antitoxin LPH58_RS06450 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system LPH58_RS06505 PF06508 Queuosine biosynthesis protein QueC LPH58_RS06510 PF01336 OB-fold nucleic acid binding domain LPH58_RS06510 PF00152 tRNA synthetases class II (D, K and N) LPH58_RS06510 PF02938 GAD domain LPH58_RS06530 PF05681 Fumarate hydratase (Fumerase) LPH58_RS06530 PF05683 Fumarase C-terminus LPH58_RS06550 PF01648 4'-phosphopantetheinyl transferase superfamily LPH58_RS06555 PF02527 rRNA small subunit methyltransferase G LPH58_RS06560 PF02779 Transketolase, pyrimidine binding domain LPH58_RS06560 PF02780 Transketolase, C-terminal domain LPH58_RS06560 PF00456 Transketolase, thiamine diphosphate binding domain LPH58_RS06565 PF00375 Sodium:dicarboxylate symporter family LPH58_RS06575 PF01625 Peptide methionine sulfoxide reductase LPH58_RS06590 PF01432 Peptidase family M3 LPH58_RS06595 PF06903 VirK protein LPH58_RS06600 PF02875 Mur ligase family, glutamate ligase domain LPH58_RS06600 PF08245 Mur ligase middle domain LPH58_RS06615 PF00156 Phosphoribosyl transferase domain LPH58_RS06625 PF01339 CheB methylesterase LPH58_RS06625 PF00072 Response regulator receiver domain LPH58_RS06630 PF01584 CheW-like domain LPH58_RS06630 PF02895 Signal transducing histidine kinase, homodimeric domain LPH58_RS06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS06630 PF01627 Hpt domain LPH58_RS06630 PF00072 Response regulator receiver domain LPH58_RS06635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LPH58_RS06635 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LPH58_RS06640 PF01584 CheW-like domain LPH58_RS06645 PF00072 Response regulator receiver domain LPH58_RS06650 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LPH58_RS06650 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LPH58_RS06665 PF02092 Glycyl-tRNA synthetase beta subunit LPH58_RS06665 PF05746 DALR anticodon binding domain LPH58_RS06670 PF02091 Glycyl-tRNA synthetase alpha subunit LPH58_RS06675 PF00795 Carbon-nitrogen hydrolase LPH58_RS06675 PF02540 NAD synthase LPH58_RS06700 PF03692 Putative zinc- or iron-chelating domain LPH58_RS06710 PF00561 alpha/beta hydrolase fold LPH58_RS06720 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LPH58_RS06720 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LPH58_RS06730 PF00588 SpoU rRNA Methylase family LPH58_RS06740 PF01808 AICARFT/IMPCHase bienzyme LPH58_RS06740 PF02142 MGS-like domain LPH58_RS06745 PF02843 Phosphoribosylglycinamide synthetase, C domain LPH58_RS06745 PF02844 Phosphoribosylglycinamide synthetase, N domain LPH58_RS06745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LPH58_RS06765 PF12805 FUSC-like inner membrane protein yccS LPH58_RS06775 PF03186 CobD/Cbib protein LPH58_RS06780 PF03895 YadA-like membrane anchor domain LPH58_RS06780 PF05658 Head domain of trimeric autotransporter adhesin LPH58_RS06780 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH58_RS06785 PF01227 GTP cyclohydrolase I LPH58_RS06790 PF00132 Bacterial transferase hexapeptide (six repeats) LPH58_RS06795 PF08032 RNA 2'-O ribose methyltransferase substrate binding LPH58_RS06795 PF00588 SpoU rRNA Methylase family LPH58_RS06800 PF00773 RNB domain LPH58_RS06800 PF08461 Ribonuclease R winged-helix domain LPH58_RS06800 PF00575 S1 RNA binding domain LPH58_RS06800 PF08206 Ribonuclease B OB domain LPH58_RS06800 PF17876 Cold shock domain LPH58_RS06810 PF00959 Phage lysozyme LPH58_RS06880 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LPH58_RS06885 PF07690 Major Facilitator Superfamily LPH58_RS06890 PF03466 LysR substrate binding domain LPH58_RS06890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_RS06905 PF01161 Phosphatidylethanolamine-binding protein LPH58_RS06910 PF00719 Inorganic pyrophosphatase LPH58_RS06915 PF00085 Thioredoxin LPH58_RS06925 PF00133 tRNA synthetases class I (I, L, M and V) LPH58_RS06925 PF08264 Anticodon-binding domain of tRNA LPH58_RS06925 PF13603 Leucyl-tRNA synthetase, Domain 2 LPH58_RS06940 PF01467 Cytidylyltransferase-like LPH58_RS06955 PF13406 Transglycosylase SLT domain LPH58_RS06960 PF05036 Sporulation related domain LPH58_RS06960 PF03330 Lytic transglycolase LPH58_RS07065 PF04829 Pre-toxin domain with VENN motif LPH58_RS07065 PF05860 haemagglutination activity domain LPH58_RS07065 PF13332 Hemagglutinin repeat LPH58_RS07065 PF15605 Bacterial toxin 28 LPH58_RS07095 PF13332 Hemagglutinin repeat LPH58_RS07095 PF05860 haemagglutination activity domain LPH58_RS07095 PF04829 Pre-toxin domain with VENN motif LPH58_RS07100 PF05860 haemagglutination activity domain LPH58_RS07100 PF13332 Hemagglutinin repeat LPH58_RS07100 PF13018 Extended Signal Peptide of Type V secretion system LPH58_RS07100 PF04829 Pre-toxin domain with VENN motif LPH58_RS07195 PF05860 haemagglutination activity domain LPH58_RS07195 PF04829 Pre-toxin domain with VENN motif LPH58_RS07195 PF15605 Bacterial toxin 28 LPH58_RS07195 PF13332 Hemagglutinin repeat LPH58_RS07195 PF04829 Pre-toxin domain with VENN motif LPH58_RS07195 PF15605 Bacterial toxin 28 LPH58_RS07195 PF05860 haemagglutination activity domain LPH58_RS07195 PF13332 Hemagglutinin repeat LPH58_RS07200 PF04829 Pre-toxin domain with VENN motif LPH58_RS07200 PF05860 haemagglutination activity domain LPH58_RS07200 PF13332 Hemagglutinin repeat LPH58_RS07200 PF13018 Extended Signal Peptide of Type V secretion system LPH58_RS07215 PF01810 LysE type translocator LPH58_RS07240 PF01132 Elongation factor P (EF-P) OB domain LPH58_RS07240 PF08207 Elongation factor P (EF-P) KOW-like domain LPH58_RS07240 PF09285 Elongation factor P, C-terminal LPH58_RS07245 PF02913 FAD linked oxidases, C-terminal domain LPH58_RS07245 PF01565 FAD binding domain LPH58_RS07250 PF01842 ACT domain LPH58_RS07250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LPH58_RS07250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LPH58_RS07255 PF13520 Amino acid permease LPH58_RS07260 PF13520 Amino acid permease LPH58_RS07265 PF00596 Class II Aldolase and Adducin N-terminal domain LPH58_RS07270 PF03079 ARD/ARD' family LPH58_RS07300 PF01502 Phosphoribosyl-AMP cyclohydrolase LPH58_RS07300 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LPH58_RS07305 PF00977 Histidine biosynthesis protein LPH58_RS07310 PF00977 Histidine biosynthesis protein LPH58_RS07315 PF00117 Glutamine amidotransferase class-I LPH58_RS07320 PF00475 Imidazoleglycerol-phosphate dehydratase LPH58_RS07325 PF00155 Aminotransferase class I and II LPH58_RS07330 PF00815 Histidinol dehydrogenase LPH58_RS07335 PF01634 ATP phosphoribosyltransferase LPH58_RS07335 PF08029 HisG, C-terminal domain LPH58_RS07350 PF03129 Anticodon binding domain LPH58_RS07350 PF13393 Histidyl-tRNA synthetase LPH58_RS07355 PF14821 Threonine synthase N terminus LPH58_RS07355 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_RS07360 PF00288 GHMP kinases N terminal domain LPH58_RS07360 PF08544 GHMP kinases C terminal LPH58_RS07365 PF00742 Homoserine dehydrogenase LPH58_RS07365 PF13840 ACT domain LPH58_RS07365 PF03447 Homoserine dehydrogenase, NAD binding domain LPH58_RS07365 PF01842 ACT domain LPH58_RS07365 PF00696 Amino acid kinase family LPH58_RS07375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LPH58_RS07375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LPH58_RS07380 PF03652 Holliday junction resolvase LPH58_RS07385 PF02622 Uncharacterized ACR, COG1678 LPH58_RS07390 PF00768 D-alanyl-D-alanine carboxypeptidase LPH58_RS07390 PF07943 Penicillin-binding protein 5, C-terminal domain LPH58_RS07395 PF00141 Peroxidase LPH58_RS07400 PF01556 DnaJ C terminal domain LPH58_RS07400 PF00226 DnaJ domain LPH58_RS07410 PF06832 Penicillin-Binding Protein C-terminus Family LPH58_RS07410 PF00912 Transglycosylase LPH58_RS07410 PF00905 Penicillin binding protein transpeptidase domain LPH58_RS07415 PF07715 TonB-dependent Receptor Plug Domain LPH58_RS07415 PF00593 TonB dependent receptor LPH58_RS07435 PF04542 Sigma-70 region 2 LPH58_RS07435 PF08281 Sigma-70, region 4 LPH58_RS07445 PF13180 PDZ domain LPH58_RS07450 PF03144 Elongation factor Tu domain 2 LPH58_RS07450 PF00009 Elongation factor Tu GTP binding domain LPH58_RS07450 PF00679 Elongation factor G C-terminus LPH58_RS07450 PF06421 GTP-binding protein LepA C-terminus LPH58_RS07455 PF10502 Signal peptidase, peptidase S26 LPH58_RS07465 PF00035 Double-stranded RNA binding motif LPH58_RS07465 PF14622 Ribonuclease-III-like LPH58_RS07470 PF07650 KH domain LPH58_RS07470 PF01926 50S ribosome-binding GTPase LPH58_RS07475 PF02565 Recombination protein O C terminal LPH58_RS07475 PF11967 Recombination protein O N terminal LPH58_RS07480 PF02779 Transketolase, pyrimidine binding domain LPH58_RS07480 PF02780 Transketolase, C-terminal domain LPH58_RS07480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LPH58_RS07490 PF00474 Sodium:solute symporter family LPH58_RS07500 PF13193 AMP-binding enzyme C-terminal domain LPH58_RS07500 PF00501 AMP-binding enzyme LPH58_RS07500 PF16177 Acetyl-coenzyme A synthetase N-terminus LPH58_RS07505 PF02659 Putative manganese efflux pump LPH58_RS07510 PF00106 short chain dehydrogenase LPH58_RS07525 PF13360 PQQ-like domain LPH58_RS07530 PF07676 WD40-like Beta Propeller Repeat LPH58_RS07530 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LPH58_RS07530 PF00326 Prolyl oligopeptidase family LPH58_RS07535 PF03169 OPT oligopeptide transporter protein LPH58_RS07540 PF01266 FAD dependent oxidoreductase LPH58_RS07540 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LPH58_RS07545 PF00230 Major intrinsic protein LPH58_RS07550 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LPH58_RS07550 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LPH58_RS07565 PF08267 Cobalamin-independent synthase, N-terminal domain LPH58_RS07565 PF01717 Cobalamin-independent synthase, Catalytic domain LPH58_RS07570 PF02677 Epoxyqueuosine reductase QueH LPH58_RS07580 PF00501 AMP-binding enzyme LPH58_RS07590 PF00535 Glycosyl transferase family 2 LPH58_RS07595 PF01370 NAD dependent epimerase/dehydratase family LPH58_RS07600 PF17762 HTH domain found in ParB protein LPH58_RS07600 PF02195 ParB-like nuclease domain LPH58_RS07605 PF13614 AAA domain LPH58_RS07620 PF02403 Seryl-tRNA synthetase N-terminal domain LPH58_RS07620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH58_RS07625 PF03544 Gram-negative bacterial TonB protein C-terminal LPH58_RS07630 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH58_RS07635 PF01817 Chorismate mutase type II LPH58_RS07635 PF01842 ACT domain LPH58_RS07635 PF00800 Prephenate dehydratase LPH58_RS07640 PF00266 Aminotransferase class-V LPH58_RS07650 PF12679 ABC-2 family transporter protein LPH58_RS07655 PF00005 ABC transporter LPH58_RS07685 PF00440 Bacterial regulatory proteins, tetR family LPH58_RS07690 PF01209 ubiE/COQ5 methyltransferase family LPH58_RS07700 PF00294 pfkB family carbohydrate kinase LPH58_RS07705 PF07690 Major Facilitator Superfamily LPH58_RS07715 PF04102 SlyX LPH58_RS07720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LPH58_RS07720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LPH58_RS07720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LPH58_RS07725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH58_RS07725 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH58_RS07730 PF00255 Glutathione peroxidase LPH58_RS07740 PF00005 ABC transporter LPH58_RS07755 PF10415 Fumarase C C-terminus LPH58_RS07755 PF00206 Lyase LPH58_RS07760 PF00206 Lyase LPH58_RS07760 PF08328 Adenylosuccinate lyase C-terminal LPH58_RS07765 PF08007 Cupin superfamily protein LPH58_RS07770 PF02779 Transketolase, pyrimidine binding domain LPH58_RS07770 PF00676 Dehydrogenase E1 component LPH58_RS07770 PF16078 2-oxoglutarate dehydrogenase N-terminus LPH58_RS07770 PF16870 2-oxoglutarate dehydrogenase C-terminal LPH58_RS07775 PF00364 Biotin-requiring enzyme LPH58_RS07775 PF02817 e3 binding domain LPH58_RS07775 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH58_RS07780 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_RS07780 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH58_RS07790 PF00899 ThiF family LPH58_RS07805 PF00027 Cyclic nucleotide-binding domain LPH58_RS07805 PF00325 Bacterial regulatory proteins, crp family LPH58_RS07810 PF02675 S-adenosylmethionine decarboxylase LPH58_RS07815 PF03232 Ubiquinone biosynthesis protein COQ7 LPH58_RS07820 PF00572 Ribosomal protein L13 LPH58_RS07825 PF00380 Ribosomal protein S9/S16 LPH58_RS07830 PF00285 Citrate synthase, C-terminal domain LPH58_RS07835 PF01197 Ribosomal protein L31 LPH58_RS07840 PF00814 Glycoprotease family LPH58_RS07845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_RS07845 PF03466 LysR substrate binding domain LPH58_RS07850 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_RS07850 PF13192 Thioredoxin domain LPH58_RS07855 PF10417 C-terminal domain of 1-Cys peroxiredoxin LPH58_RS07855 PF00578 AhpC/TSA family LPH58_RS07860 PF13018 Extended Signal Peptide of Type V secretion system LPH58_RS07860 PF03895 YadA-like membrane anchor domain LPH58_RS07860 PF05658 Head domain of trimeric autotransporter adhesin LPH58_RS07860 PF05662 Coiled stalk of trimeric autotransporter adhesin LPH58_RS07865 PF00263 Bacterial type II and III secretion system protein LPH58_RS07865 PF03958 Bacterial type II/III secretion system short domain LPH58_RS07875 PF10741 Type II secretion system (T2SS), protein M subtype b LPH58_RS07880 PF05137 Fimbrial assembly protein (PilN) LPH58_RS07885 PF03934 Type II secretion system (T2SS), protein K LPH58_RS07895 PF03934 Type II secretion system (T2SS), protein K LPH58_RS07905 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS07910 PF12019 Type II transport protein GspH LPH58_RS07915 PF08334 Type II secretion system (T2SS), protein G LPH58_RS07920 PF00482 Type II secretion system (T2SS), protein F LPH58_RS07925 PF00437 Type II/IV secretion system protein LPH58_RS07925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH58_RS07945 PF17827 PrmC N-terminal domain LPH58_RS07945 PF05175 Methyltransferase small domain LPH58_RS07955 PF00561 alpha/beta hydrolase fold LPH58_RS07970 PF04055 Radical SAM superfamily LPH58_RS07970 PF06969 HemN C-terminal domain LPH58_RS07975 PF01725 Ham1 family LPH58_RS07980 PF03725 3' exoribonuclease family, domain 2 LPH58_RS07980 PF01138 3' exoribonuclease family, domain 1 LPH58_RS07985 PF03755 YicC-like family, N-terminal region LPH58_RS07985 PF08340 Domain of unknown function (DUF1732) LPH58_RS07990 PF00625 Guanylate kinase LPH58_RS07995 PF01192 RNA polymerase Rpb6 LPH58_RS08000 PF00009 Elongation factor Tu GTP binding domain LPH58_RS08005 PF01507 Phosphoadenosine phosphosulfate reductase family LPH58_RS08010 PF00175 Oxidoreductase NAD-binding domain LPH58_RS08010 PF00667 FAD binding domain LPH58_RS08010 PF00258 Flavodoxin LPH58_RS08015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LPH58_RS08015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LPH58_RS08020 PF01507 Phosphoadenosine phosphosulfate reductase family LPH58_RS08045 PF13369 Transglutaminase-like superfamily LPH58_RS08075 PF11838 ERAP1-like C-terminal domain LPH58_RS08075 PF01433 Peptidase family M1 domain LPH58_RS08080 PF01209 ubiE/COQ5 methyltransferase family LPH58_RS08090 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_RS08090 PF07724 AAA domain (Cdc48 subfamily) LPH58_RS08090 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_RS08095 PF00227 Proteasome subunit LPH58_RS08105 PF02899 Phage integrase, N-terminal SAM-like domain LPH58_RS08105 PF00589 Phage integrase family LPH58_RS08115 PF01678 Diaminopimelate epimerase LPH58_RS08125 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LPH58_RS08125 PF00326 Prolyl oligopeptidase family LPH58_RS08135 PF02082 Transcriptional regulator LPH58_RS08140 PF01458 Uncharacterized protein family (UPF0051) LPH58_RS08145 PF00005 ABC transporter LPH58_RS08150 PF01458 Uncharacterized protein family (UPF0051) LPH58_RS08155 PF00266 Aminotransferase class-V LPH58_RS08160 PF00355 Rieske [2Fe-2S] domain LPH58_RS08165 PF13439 Glycosyltransferase Family 4 LPH58_RS08165 PF00534 Glycosyl transferases group 1 LPH58_RS08170 PF01522 Polysaccharide deacetylase LPH58_RS08175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LPH58_RS08175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LPH58_RS08175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LPH58_RS08175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LPH58_RS08180 PF17848 Acetyl-coA carboxylase zinc finger domain LPH58_RS08180 PF01039 Carboxyl transferase domain LPH58_RS08200 PF01979 Amidohydrolase family LPH58_RS08205 PF01380 SIS domain LPH58_RS08215 PF07690 Major Facilitator Superfamily LPH58_RS08225 PF02685 Glucokinase LPH58_RS08250 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS08250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS08265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LPH58_RS08270 PF16193 AAA C-terminal domain LPH58_RS08270 PF12002 MgsA AAA+ ATPase C terminal LPH58_RS08270 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_RS08275 PF03548 Outer membrane lipoprotein carrier protein LolA LPH58_RS08290 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LPH58_RS08290 PF17854 FtsK alpha domain LPH58_RS08290 PF09397 Ftsk gamma domain LPH58_RS08290 PF01580 FtsK/SpoIIIE family LPH58_RS08295 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_RS08305 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LPH58_RS08310 PF01176 Translation initiation factor 1A / IF-1 LPH58_RS08315 PF07724 AAA domain (Cdc48 subfamily) LPH58_RS08315 PF17871 AAA lid domain LPH58_RS08315 PF02861 Clp amino terminal domain, pathogenicity island component LPH58_RS08315 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_RS08315 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_RS08320 PF02617 ATP-dependent Clp protease adaptor protein ClpS LPH58_RS08325 PF00293 NUDIX domain LPH58_RS08335 PF04356 Protein of unknown function (DUF489) LPH58_RS08350 PF01323 DSBA-like thioredoxin domain LPH58_RS08360 PF01926 50S ribosome-binding GTPase LPH58_RS08365 PF04107 Glutamate-cysteine ligase family 2(GCS2) LPH58_RS08375 PF00202 Aminotransferase class-III LPH58_RS08380 PF00027 Cyclic nucleotide-binding domain LPH58_RS08380 PF00520 Ion transport protein LPH58_RS08385 PF02899 Phage integrase, N-terminal SAM-like domain LPH58_RS08385 PF00589 Phage integrase family LPH58_RS08390 PF13098 Thioredoxin-like domain LPH58_RS08390 PF10411 Disulfide bond isomerase protein N-terminus LPH58_RS08395 PF02769 AIR synthase related protein, C-terminal domain LPH58_RS08395 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LPH58_RS08395 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LPH58_RS08405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LPH58_RS08415 PF00571 CBS domain LPH58_RS08415 PF01380 SIS domain LPH58_RS08435 PF00005 ABC transporter LPH58_RS08435 PF12399 Branched-chain amino acid ATP-binding cassette transporter LPH58_RS08440 PF00309 Sigma-54 factor, Activator interacting domain (AID) LPH58_RS08440 PF04963 Sigma-54 factor, core binding domain LPH58_RS08440 PF04552 Sigma-54, DNA binding domain LPH58_RS08445 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LPH58_RS08450 PF07475 HPr Serine kinase C-terminal domain LPH58_RS08450 PF02603 HPr Serine kinase N terminus LPH58_RS08455 PF03668 P-loop ATPase protein family LPH58_RS08465 PF00381 PTS HPr component phosphorylation site LPH58_RS08470 PF05524 PEP-utilising enzyme, N-terminal LPH58_RS08470 PF00391 PEP-utilising enzyme, mobile domain LPH58_RS08470 PF02896 PEP-utilising enzyme, TIM barrel domain LPH58_RS08475 PF00571 CBS domain LPH58_RS08475 PF01769 Divalent cation transporter LPH58_RS08475 PF03448 MgtE intracellular N domain LPH58_RS08480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LPH58_RS08515 PF04542 Sigma-70 region 2 LPH58_RS08515 PF08281 Sigma-70, region 4 LPH58_RS08525 PF00082 Subtilase family LPH58_RS08535 PF00436 Single-strand binding protein family LPH58_RS08540 PF00348 Polyprenyl synthetase LPH58_RS08545 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LPH58_RS08545 PF06481 COX Aromatic Rich Motif LPH58_RS08550 PF00115 Cytochrome C and Quinol oxidase polypeptide I LPH58_RS08555 PF00510 Cytochrome c oxidase subunit III LPH58_RS08560 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LPH58_RS08565 PF02347 Glycine cleavage system P-protein LPH58_RS08575 PF00270 DEAD/DEAH box helicase LPH58_RS08575 PF11898 Domain of unknown function (DUF3418) LPH58_RS08575 PF04408 Helicase associated domain (HA2) LPH58_RS08575 PF00271 Helicase conserved C-terminal domain LPH58_RS08575 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LPH58_RS08580 PF00210 Ferritin-like domain LPH58_RS08585 PF00271 Helicase conserved C-terminal domain LPH58_RS08585 PF00270 DEAD/DEAH box helicase LPH58_RS08585 PF16124 RecQ zinc-binding LPH58_RS08585 PF09382 RQC domain LPH58_RS08585 PF00570 HRDC domain LPH58_RS08605 PF00296 Luciferase-like monooxygenase LPH58_RS08610 PF18073 Rubredoxin metal binding domain LPH58_RS08620 PF00290 Tryptophan synthase alpha chain LPH58_RS08625 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_RS08635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LPH58_RS08640 PF01416 tRNA pseudouridine synthase LPH58_RS08650 PF01118 Semialdehyde dehydrogenase, NAD binding domain LPH58_RS08650 PF02774 Semialdehyde dehydrogenase, dimerisation domain LPH58_RS08660 PF01264 Chorismate synthase LPH58_RS08665 PF05175 Methyltransferase small domain LPH58_RS08675 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_RS08675 PF06594 Haemolysin-type calcium binding protein related domain LPH58_RS08730 PF00348 Polyprenyl synthetase LPH58_RS08735 PF02609 Exonuclease VII small subunit LPH58_RS08740 PF09179 TilS substrate binding domain LPH58_RS08740 PF11734 TilS substrate C-terminal domain LPH58_RS08740 PF01171 PP-loop family LPH58_RS08750 PF00375 Sodium:dicarboxylate symporter family LPH58_RS08755 PF00877 NlpC/P60 family LPH58_RS08760 PF00877 NlpC/P60 family LPH58_RS08765 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH58_RS08770 PF04235 Protein of unknown function (DUF418) LPH58_RS08795 PF10576 Iron-sulfur binding domain of endonuclease III LPH58_RS08795 PF00633 Helix-hairpin-helix motif LPH58_RS08795 PF00730 HhH-GPD superfamily base excision DNA repair protein LPH58_RS08810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LPH58_RS08810 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LPH58_RS08815 PF00293 NUDIX domain LPH58_RS08840 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LPH58_RS08840 PF01488 Shikimate / quinate 5-dehydrogenase LPH58_RS08840 PF08501 Shikimate dehydrogenase substrate binding domain LPH58_RS08845 PF08543 Phosphomethylpyrimidine kinase LPH58_RS08845 PF02581 Thiamine monophosphate synthase LPH58_RS08865 PF11412 Disulphide bond corrector protein DsbC LPH58_RS08865 PF02683 Cytochrome C biogenesis protein transmembrane region LPH58_RS08870 PF03091 CutA1 divalent ion tolerance protein LPH58_RS08875 PF00166 Chaperonin 10 Kd subunit LPH58_RS08880 PF00118 TCP-1/cpn60 chaperonin family LPH58_RS08905 PF01370 NAD dependent epimerase/dehydratase family LPH58_RS08910 PF01370 NAD dependent epimerase/dehydratase family LPH58_RS08915 PF16363 GDP-mannose 4,6 dehydratase LPH58_RS08930 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_RS08950 PF07715 TonB-dependent Receptor Plug Domain LPH58_RS08950 PF00593 TonB dependent receptor LPH58_RS08955 PF13640 2OG-Fe(II) oxygenase superfamily LPH58_RS08955 PF18331 PKHD-type hydroxylase C-terminal domain LPH58_RS08975 PF02424 ApbE family LPH58_RS08980 PF00667 FAD binding domain LPH58_RS08980 PF00258 Flavodoxin LPH58_RS08980 PF00175 Oxidoreductase NAD-binding domain LPH58_RS08990 PF01636 Phosphotransferase enzyme family LPH58_RS08995 PF00483 Nucleotidyl transferase LPH58_RS09000 PF00308 Bacterial dnaA protein LPH58_RS09005 PF01594 AI-2E family transporter LPH58_RS09015 PF02769 AIR synthase related protein, C-terminal domain LPH58_RS09015 PF00586 AIR synthase related protein, N-terminal domain LPH58_RS09020 PF00551 Formyl transferase LPH58_RS09035 PF02223 Thymidylate kinase LPH58_RS09040 PF01431 Peptidase family M13 LPH58_RS09040 PF05649 Peptidase family M13 LPH58_RS09045 PF07977 FabA-like domain LPH58_RS09050 PF01171 PP-loop family LPH58_RS09055 PF04381 Putative exonuclease, RdgC LPH58_RS09065 PF00762 Ferrochelatase LPH58_RS09075 PF02416 mttA/Hcf106 family LPH58_RS09080 PF02416 mttA/Hcf106 family LPH58_RS09085 PF00902 Sec-independent protein translocase protein (TatC) LPH58_RS09095 PF00117 Glutamine amidotransferase class-I LPH58_RS09095 PF00958 GMP synthase C terminal domain LPH58_RS09095 PF02540 NAD synthase LPH58_RS09100 PF00127 Copper binding proteins, plastocyanin/azurin family LPH58_RS09105 PF03193 RsgA GTPase LPH58_RS09110 PF02021 Uncharacterised protein family UPF0102 LPH58_RS09115 PF04348 LppC putative lipoprotein LPH58_RS09120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH58_RS09125 PF07715 TonB-dependent Receptor Plug Domain LPH58_RS09125 PF00593 TonB dependent receptor LPH58_RS09130 PF01588 Putative tRNA binding domain LPH58_RS09130 PF09334 tRNA synthetases class I (M) LPH58_RS09140 PF04060 Putative Fe-S cluster LPH58_RS09185 PF07687 Peptidase dimerisation domain LPH58_RS09185 PF01546 Peptidase family M20/M25/M40 LPH58_RS09210 PF05567 Neisseria PilC beta-propeller domain LPH58_RS09235 PF11892 Domain of unknown function (DUF3412) LPH58_RS09235 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LPH58_RS09235 PF03641 Possible lysine decarboxylase LPH58_RS09240 PF12792 CSS motif domain associated with EAL LPH58_RS09240 PF00563 EAL domain LPH58_RS09250 PF00899 ThiF family LPH58_RS09255 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LPH58_RS09255 PF01926 50S ribosome-binding GTPase LPH58_RS09260 PF13360 PQQ-like domain LPH58_RS09260 PF01011 PQQ enzyme repeat LPH58_RS09280 PF04055 Radical SAM superfamily LPH58_RS09285 PF00334 Nucleoside diphosphate kinase LPH58_RS09290 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LPH58_RS09290 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LPH58_RS09295 PF00709 Adenylosuccinate synthetase LPH58_RS09305 PF01145 SPFH domain / Band 7 family LPH58_RS09310 PF01145 SPFH domain / Band 7 family LPH58_RS09310 PF12221 Bacterial membrane protein N terminal LPH58_RS09315 PF08240 Alcohol dehydrogenase GroES-like domain LPH58_RS09315 PF00107 Zinc-binding dehydrogenase LPH58_RS09320 PF00072 Response regulator receiver domain LPH58_RS09335 PF03129 Anticodon binding domain LPH58_RS09335 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH58_RS09335 PF04073 Aminoacyl-tRNA editing domain LPH58_RS09345 PF01066 CDP-alcohol phosphatidyltransferase LPH58_RS09355 PF00583 Acetyltransferase (GNAT) family LPH58_RS09370 PF14310 Fibronectin type III-like domain LPH58_RS09370 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH58_RS09370 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH58_RS09375 PF00924 Mechanosensitive ion channel LPH58_RS09380 PF02152 Dihydroneopterin aldolase LPH58_RS09385 PF00814 Glycoprotease family LPH58_RS09390 PF01165 Ribosomal protein S21 LPH58_RS09395 PF09424 Yqey-like protein LPH58_RS09400 PF03631 Virulence factor BrkB LPH58_RS09405 PF10410 DnaB-helicase binding domain of primase LPH58_RS09405 PF08278 DNA primase DnaG DnaB-binding LPH58_RS09405 PF01807 CHC2 zinc finger LPH58_RS09405 PF08275 DNA primase catalytic core, N-terminal domain LPH58_RS09415 PF00579 tRNA synthetases class I (W and Y) LPH58_RS09420 PF13538 UvrD-like helicase C-terminal domain LPH58_RS09425 PF00580 UvrD/REP helicase N-terminal domain LPH58_RS09425 PF13361 UvrD-like helicase C-terminal domain LPH58_RS09425 PF12705 PD-(D/E)XK nuclease superfamily LPH58_RS09430 PF17946 RecC C-terminal domain LPH58_RS09435 PF00005 ABC transporter LPH58_RS09440 PF02405 Permease MlaE LPH58_RS09445 PF02470 MlaD protein LPH58_RS09450 PF05494 MlaC protein LPH58_RS09460 PF04333 MlaA lipoprotein LPH58_RS09465 PF02646 RmuC family LPH58_RS09470 PF00005 ABC transporter LPH58_RS09485 PF13520 Amino acid permease LPH58_RS09495 PF10672 S-adenosylmethionine-dependent methyltransferase LPH58_RS09495 PF17785 PUA-like domain LPH58_RS09500 PF03741 Integral membrane protein TerC family LPH58_RS09515 PF01521 Iron-sulphur cluster biosynthesis LPH58_RS09530 PF00072 Response regulator receiver domain LPH58_RS09530 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS09535 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH58_RS09535 PF00672 HAMP domain LPH58_RS09535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS09535 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS09535 PF00072 Response regulator receiver domain LPH58_RS09535 PF01627 Hpt domain LPH58_RS09540 PF01627 Hpt domain LPH58_RS09540 PF00672 HAMP domain LPH58_RS09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS09540 PF00072 Response regulator receiver domain LPH58_RS09540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LPH58_RS09540 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS09545 PF00210 Ferritin-like domain LPH58_RS09570 PF02773 S-adenosylmethionine synthetase, C-terminal domain LPH58_RS09570 PF02772 S-adenosylmethionine synthetase, central domain LPH58_RS09570 PF00438 S-adenosylmethionine synthetase, N-terminal domain LPH58_RS09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS09585 PF00072 Response regulator receiver domain LPH58_RS09585 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS09595 PF01207 Dihydrouridine synthase (Dus) LPH58_RS09600 PF00593 TonB dependent receptor LPH58_RS09600 PF07715 TonB-dependent Receptor Plug Domain LPH58_RS09615 PF00004 ATPase family associated with various cellular activities (AAA) LPH58_RS09615 PF07724 AAA domain (Cdc48 subfamily) LPH58_RS09615 PF17871 AAA lid domain LPH58_RS09615 PF02861 Clp amino terminal domain, pathogenicity island component LPH58_RS09615 PF10431 C-terminal, D2-small domain, of ClpB protein LPH58_RS09625 PF00301 Rubredoxin LPH58_RS09630 PF02581 Thiamine monophosphate synthase LPH58_RS09645 PF00067 Cytochrome P450 LPH58_RS09675 PF03796 DnaB-like helicase C terminal domain LPH58_RS09675 PF00772 DnaB-like helicase N terminal domain LPH58_RS09680 PF00691 OmpA family LPH58_RS09680 PF05736 OprF membrane domain LPH58_RS09690 PF00248 Aldo/keto reductase family LPH58_RS09695 PF17092 Penicillin-binding protein OB-like domain LPH58_RS09695 PF00912 Transglycosylase LPH58_RS09695 PF00905 Penicillin binding protein transpeptidase domain LPH58_RS09700 PF11104 Type IV pilus assembly protein PilM; LPH58_RS09705 PF05137 Fimbrial assembly protein (PilN) LPH58_RS09710 PF04350 Pilus assembly protein, PilO LPH58_RS09715 PF04351 Pilus assembly protein, PilP LPH58_RS09720 PF07660 Secretin and TonB N terminus short domain LPH58_RS09720 PF00263 Bacterial type II and III secretion system protein LPH58_RS09720 PF03958 Bacterial type II/III secretion system short domain LPH58_RS09720 PF11741 AMIN domain LPH58_RS09730 PF08019 Phosphoethanolamine transferase EptA/EptB LPH58_RS09730 PF00884 Sulfatase LPH58_RS09735 PF00067 Cytochrome P450 LPH58_RS09740 PF00270 DEAD/DEAH box helicase LPH58_RS09740 PF00271 Helicase conserved C-terminal domain LPH58_RS09740 PF17191 RecG wedge domain LPH58_RS09745 PF01042 Endoribonuclease L-PSP LPH58_RS09750 PF13291 ACT domain LPH58_RS09750 PF04607 Region found in RelA / SpoT proteins LPH58_RS09750 PF02824 TGS domain LPH58_RS09760 PF01565 FAD binding domain LPH58_RS09760 PF02913 FAD linked oxidases, C-terminal domain LPH58_RS09765 PF05736 OprF membrane domain LPH58_RS09765 PF00691 OmpA family LPH58_RS09770 PF02600 Disulfide bond formation protein DsbB LPH58_RS09775 PF07715 TonB-dependent Receptor Plug Domain LPH58_RS09775 PF00593 TonB dependent receptor LPH58_RS09780 PF02590 Predicted SPOUT methyltransferase LPH58_RS09795 PF00271 Helicase conserved C-terminal domain LPH58_RS09795 PF04851 Type III restriction enzyme, res subunit LPH58_RS09795 PF02151 UvrB/uvrC motif LPH58_RS09795 PF12344 Ultra-violet resistance protein B LPH58_RS09795 PF17757 UvrB interaction domain LPH58_RS09810 PF00701 Dihydrodipicolinate synthetase family LPH58_RS09820 PF00578 AhpC/TSA family LPH58_RS09825 PF02562 PhoH-like protein LPH58_RS09825 PF13638 PIN domain LPH58_RS09845 PF00586 AIR synthase related protein, N-terminal domain LPH58_RS09845 PF02769 AIR synthase related protein, C-terminal domain LPH58_RS09850 PF01029 NusB family LPH58_RS09855 PF00885 6,7-dimethyl-8-ribityllumazine synthase LPH58_RS09860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LPH58_RS09860 PF00925 GTP cyclohydrolase II LPH58_RS09865 PF00677 Lumazine binding domain LPH58_RS09870 PF01872 RibD C-terminal domain LPH58_RS09870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LPH58_RS09880 PF03477 ATP cone domain LPH58_RS09890 PF00464 Serine hydroxymethyltransferase LPH58_RS09895 PF00005 ABC transporter LPH58_RS09895 PF12848 ABC transporter LPH58_RS09900 PF06039 Malate:quinone oxidoreductase (Mqo) LPH58_RS09905 PF04134 Protein of unknown function, DUF393 LPH58_RS09910 PF02578 Multi-copper polyphenol oxidoreductase laccase LPH58_RS09915 PF00849 RNA pseudouridylate synthase LPH58_RS09915 PF01479 S4 domain LPH58_RS09920 PF13525 Outer membrane lipoprotein LPH58_RS09930 PF07670 Nucleoside recognition LPH58_RS09930 PF02421 Ferrous iron transport protein B LPH58_RS09930 PF07664 Ferrous iron transport protein B C terminus LPH58_RS09945 PF04386 Stringent starvation protein B LPH58_RS09950 PF00043 Glutathione S-transferase, C-terminal domain LPH58_RS09950 PF02798 Glutathione S-transferase, N-terminal domain LPH58_RS09970 PF01464 Transglycosylase SLT domain LPH58_RS09975 PF01938 TRAM domain LPH58_RS09975 PF00919 Uncharacterized protein family UPF0004 LPH58_RS09975 PF04055 Radical SAM superfamily LPH58_RS09980 PF02562 PhoH-like protein LPH58_RS09985 PF02130 Uncharacterized protein family UPF0054 LPH58_RS09995 PF00571 CBS domain LPH58_RS09995 PF03471 Transporter associated domain LPH58_RS10025 PF13332 Hemagglutinin repeat LPH58_RS10025 PF04829 Pre-toxin domain with VENN motif LPH58_RS10025 PF05860 haemagglutination activity domain LPH58_RS10030 PF13332 Hemagglutinin repeat LPH58_RS10030 PF05860 haemagglutination activity domain LPH58_RS10030 PF04829 Pre-toxin domain with VENN motif LPH58_RS10030 PF13018 Extended Signal Peptide of Type V secretion system LPH58_RS10035 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LPH58_RS10035 PF17287 POTRA domain LPH58_RS10035 PF08479 POTRA domain, ShlB-type LPH58_RS10045 PF00521 DNA gyrase/topoisomerase IV, subunit A LPH58_RS10045 PF03989 DNA gyrase C-terminal domain, beta-propeller LPH58_RS10050 PF01008 Initiation factor 2 subunit family LPH58_RS10060 PF00152 tRNA synthetases class II (D, K and N) LPH58_RS10065 PF00583 Acetyltransferase (GNAT) family LPH58_RS10070 PF01653 NAD-dependent DNA ligase adenylation domain LPH58_RS10070 PF00533 BRCA1 C Terminus (BRCT) domain LPH58_RS10070 PF12826 Helix-hairpin-helix motif LPH58_RS10070 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LPH58_RS10070 PF03120 NAD-dependent DNA ligase OB-fold domain LPH58_RS10080 PF04354 ZipA, C-terminal FtsZ-binding domain LPH58_RS10085 PF02463 RecF/RecN/SMC N terminal domain LPH58_RS10090 PF01281 Ribosomal protein L9, N-terminal domain LPH58_RS10090 PF03948 Ribosomal protein L9, C-terminal domain LPH58_RS10095 PF01084 Ribosomal protein S18 LPH58_RS10100 PF01250 Ribosomal protein S6 LPH58_RS10105 PF01521 Iron-sulphur cluster biosynthesis LPH58_RS10110 PF01336 OB-fold nucleic acid binding domain LPH58_RS10110 PF00152 tRNA synthetases class II (D, K and N) LPH58_RS10115 PF01061 ABC-2 type transporter LPH58_RS10120 PF00005 ABC transporter LPH58_RS10130 PF01180 Dihydroorotate dehydrogenase LPH58_RS10135 PF01565 FAD binding domain LPH58_RS10135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LPH58_RS10140 PF00892 EamA-like transporter family LPH58_RS10145 PF01569 PAP2 superfamily LPH58_RS10150 PF04551 GcpE protein LPH58_RS10160 PF00072 Response regulator receiver domain LPH58_RS10165 PF00889 Elongation factor TS LPH58_RS10170 PF00318 Ribosomal protein S2 LPH58_RS10185 PF00005 ABC transporter LPH58_RS10185 PF00664 ABC transporter transmembrane region LPH58_RS10205 PF02321 Outer membrane efflux protein LPH58_RS10210 PF12850 Calcineurin-like phosphoesterase superfamily domain LPH58_RS10215 PF02541 Ppx/GppA phosphatase family LPH58_RS10220 PF13090 Polyphosphate kinase C-terminal domain 2 LPH58_RS10220 PF02503 Polyphosphate kinase middle domain LPH58_RS10220 PF13089 Polyphosphate kinase N-terminal domain LPH58_RS10220 PF17941 Polyphosphate kinase C-terminal domain 1 LPH58_RS10225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS10225 PF11808 Phosphate regulon sensor protein PhoR LPH58_RS10225 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS10225 PF00989 PAS fold LPH58_RS10230 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS10230 PF00072 Response regulator receiver domain LPH58_RS10235 PF13181 Tetratricopeptide repeat LPH58_RS10235 PF01435 Peptidase family M48 LPH58_RS10240 PF00462 Glutaredoxin LPH58_RS10245 PF00180 Isocitrate/isopropylmalate dehydrogenase LPH58_RS10255 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LPH58_RS10255 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LPH58_RS10265 PF00037 4Fe-4S binding domain LPH58_RS10265 PF11953 Domain of unknown function (DUF3470) LPH58_RS10275 PF01106 NifU-like domain LPH58_RS10280 PF01329 Pterin 4 alpha carbinolamine dehydratase LPH58_RS10295 PF00849 RNA pseudouridylate synthase LPH58_RS10295 PF01479 S4 domain LPH58_RS10300 PF00575 S1 RNA binding domain LPH58_RS10300 PF10150 Ribonuclease E/G family LPH58_RS10300 PF12111 Polyribonucleotide phosphorylase C terminal LPH58_RS10305 PF00072 Response regulator receiver domain LPH58_RS10305 PF00196 Bacterial regulatory proteins, luxR family LPH58_RS10310 PF17773 UPF0176 acylphosphatase like domain LPH58_RS10320 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LPH58_RS10320 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LPH58_RS10325 PF00545 ribonuclease LPH58_RS10335 PF12848 ABC transporter LPH58_RS10335 PF16326 ABC transporter C-terminal domain LPH58_RS10335 PF00005 ABC transporter LPH58_RS10340 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LPH58_RS10345 PF00313 'Cold-shock' DNA-binding domain LPH58_RS10355 PF01435 Peptidase family M48 LPH58_RS10360 PF03143 Elongation factor Tu C-terminal domain LPH58_RS10360 PF03144 Elongation factor Tu domain 2 LPH58_RS10360 PF00009 Elongation factor Tu GTP binding domain LPH58_RS10365 PF03144 Elongation factor Tu domain 2 LPH58_RS10365 PF14492 Elongation Factor G, domain II LPH58_RS10365 PF03764 Elongation factor G, domain IV LPH58_RS10365 PF00009 Elongation factor Tu GTP binding domain LPH58_RS10365 PF00679 Elongation factor G C-terminus LPH58_RS10370 PF00177 Ribosomal protein S7p/S5e LPH58_RS10375 PF00164 Ribosomal protein S12/S23 LPH58_RS10380 PF05000 RNA polymerase Rpb1, domain 4 LPH58_RS10380 PF04983 RNA polymerase Rpb1, domain 3 LPH58_RS10380 PF04997 RNA polymerase Rpb1, domain 1 LPH58_RS10380 PF00623 RNA polymerase Rpb1, domain 2 LPH58_RS10380 PF04998 RNA polymerase Rpb1, domain 5 LPH58_RS10385 PF04563 RNA polymerase beta subunit LPH58_RS10385 PF04561 RNA polymerase Rpb2, domain 2 LPH58_RS10385 PF04565 RNA polymerase Rpb2, domain 3 LPH58_RS10385 PF10385 RNA polymerase beta subunit external 1 domain LPH58_RS10385 PF00562 RNA polymerase Rpb2, domain 6 LPH58_RS10385 PF04560 RNA polymerase Rpb2, domain 7 LPH58_RS10390 PF00542 Ribosomal protein L7/L12 C-terminal domain LPH58_RS10390 PF16320 Ribosomal protein L7/L12 dimerisation domain LPH58_RS10395 PF00466 Ribosomal protein L10 LPH58_RS10400 PF00687 Ribosomal protein L1p/L10e family LPH58_RS10405 PF00298 Ribosomal protein L11, RNA binding domain LPH58_RS10405 PF03946 Ribosomal protein L11, N-terminal domain LPH58_RS10410 PF00467 KOW motif LPH58_RS10410 PF02357 Transcription termination factor nusG LPH58_RS10415 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LPH58_RS10425 PF03144 Elongation factor Tu domain 2 LPH58_RS10425 PF00009 Elongation factor Tu GTP binding domain LPH58_RS10425 PF03143 Elongation factor Tu C-terminal domain LPH58_RS10445 PF01926 50S ribosome-binding GTPase LPH58_RS10445 PF06071 Protein of unknown function (DUF933) LPH58_RS10450 PF01195 Peptidyl-tRNA hydrolase LPH58_RS10455 PF01386 Ribosomal L25p family LPH58_RS10455 PF14693 Ribosomal protein TL5, C-terminal domain LPH58_RS10460 PF14572 Phosphoribosyl synthetase-associated domain LPH58_RS10460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LPH58_RS10470 PF08544 GHMP kinases C terminal LPH58_RS10470 PF00288 GHMP kinases N terminal domain LPH58_RS10475 PF03550 Outer membrane lipoprotein LolB LPH58_RS10485 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LPH58_RS10485 PF01488 Shikimate / quinate 5-dehydrogenase LPH58_RS10485 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LPH58_RS10490 PF00472 RF-1 domain LPH58_RS10490 PF03462 PCRF domain LPH58_RS10500 PF01170 Putative RNA methylase family UPF0020 LPH58_RS10500 PF02926 THUMP domain LPH58_RS10500 PF10672 S-adenosylmethionine-dependent methyltransferase LPH58_RS10560 PF00497 Bacterial extracellular solute-binding proteins, family 3 LPH58_RS10565 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS10570 PF00005 ABC transporter LPH58_RS10575 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS10580 PF13361 UvrD-like helicase C-terminal domain LPH58_RS10580 PF00580 UvrD/REP helicase N-terminal domain LPH58_RS10580 PF12705 PD-(D/E)XK nuclease superfamily LPH58_RS10590 PF01914 MarC family integral membrane protein LPH58_RS10595 PF00462 Glutaredoxin LPH58_RS10600 PF02222 ATP-grasp domain LPH58_RS10600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LPH58_RS10605 PF00731 AIR carboxylase LPH58_RS10625 PF07732 Multicopper oxidase LPH58_RS10625 PF07731 Multicopper oxidase LPH58_RS10635 PF13361 UvrD-like helicase C-terminal domain LPH58_RS10635 PF00580 UvrD/REP helicase N-terminal domain LPH58_RS10645 PF04349 Periplasmic glucan biosynthesis protein, MdoG LPH58_RS10650 PF01343 Peptidase family S49 LPH58_RS10655 PF01554 MatE LPH58_RS10670 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LPH58_RS10670 PF17764 3′ DNA-binding domain (3′BD) LPH58_RS10670 PF00271 Helicase conserved C-terminal domain LPH58_RS10670 PF00270 DEAD/DEAH box helicase LPH58_RS10670 PF18074 Primosomal protein N C-terminal domain LPH58_RS10675 PF00140 Sigma-70 factor, region 1.2 LPH58_RS10675 PF04542 Sigma-70 region 2 LPH58_RS10675 PF04545 Sigma-70, region 4 LPH58_RS10680 PF03167 Uracil DNA glycosylase superfamily LPH58_RS10685 PF00072 Response regulator receiver domain LPH58_RS10685 PF01339 CheB methylesterase LPH58_RS10690 PF18075 FtsX extracellular domain LPH58_RS10695 PF00005 ABC transporter LPH58_RS10700 PF12300 ATP-dependent RNA helicase RhlB LPH58_RS10700 PF00271 Helicase conserved C-terminal domain LPH58_RS10700 PF00270 DEAD/DEAH box helicase LPH58_RS10705 PF00085 Thioredoxin LPH58_RS10710 PF07497 Rho termination factor, RNA-binding domain LPH58_RS10710 PF07498 Rho termination factor, N-terminal domain LPH58_RS10710 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LPH58_RS10715 PF03971 Monomeric isocitrate dehydrogenase LPH58_RS10720 PF09704 CRISPR-associated protein (Cas_Cas5) LPH58_RS10735 PF03572 Peptidase family S41 LPH58_RS10735 PF13180 PDZ domain LPH58_RS10740 PF01551 Peptidase family M23 LPH58_RS10750 PF00150 Cellulase (glycosyl hydrolase family 5) LPH58_RS10770 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LPH58_RS10770 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_RS10775 PF01493 GXGXG motif LPH58_RS10775 PF01645 Conserved region in glutamate synthase LPH58_RS10775 PF04898 Glutamate synthase central domain LPH58_RS10775 PF00310 Glutamine amidotransferases class-II LPH58_RS10785 PF14748 Pyrroline-5-carboxylate reductase dimerisation LPH58_RS10785 PF03807 NADP oxidoreductase coenzyme F420-dependent LPH58_RS10870 PF05860 haemagglutination activity domain LPH58_RS10870 PF13332 Hemagglutinin repeat LPH58_RS10870 PF04829 Pre-toxin domain with VENN motif LPH58_RS10875 PF13018 Extended Signal Peptide of Type V secretion system LPH58_RS10875 PF13332 Hemagglutinin repeat LPH58_RS10875 PF04829 Pre-toxin domain with VENN motif LPH58_RS10875 PF05860 haemagglutination activity domain LPH58_RS10915 PF12008 Type I restriction and modification enzyme - subunit R C terminal LPH58_RS10915 PF18766 SWI2/SNF2 ATPase LPH58_RS10915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH58_RS10920 PF01420 Type I restriction modification DNA specificity domain LPH58_RS10930 PF02384 N-6 DNA Methylase LPH58_RS10930 PF12161 HsdM N-terminal domain LPH58_RS11015 PF11867 Domain of unknown function (DUF3387) LPH58_RS11015 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LPH58_RS11015 PF18766 SWI2/SNF2 ATPase LPH58_RS11020 PF01420 Type I restriction modification DNA specificity domain LPH58_RS11025 PF02384 N-6 DNA Methylase LPH58_RS11030 PF02384 N-6 DNA Methylase LPH58_RS11070 PF06594 Haemolysin-type calcium binding protein related domain LPH58_RS11070 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LPH58_RS11140 PF01638 HxlR-like helix-turn-helix LPH58_RS11145 PF00106 short chain dehydrogenase LPH58_RS11165 PF00912 Transglycosylase LPH58_RS11165 PF14814 Bifunctional transglycosylase second domain LPH58_RS11165 PF00905 Penicillin binding protein transpeptidase domain LPH58_RS11175 PF04851 Type III restriction enzyme, res subunit LPH58_RS11175 PF13307 Helicase C-terminal domain LPH58_RS11185 PF00484 Carbonic anhydrase LPH58_RS11190 PF00534 Glycosyl transferases group 1 LPH58_RS11195 PF01522 Polysaccharide deacetylase LPH58_RS11205 PF00005 ABC transporter LPH58_RS11205 PF09383 NIL domain LPH58_RS11210 PF00528 Binding-protein-dependent transport system inner membrane component LPH58_RS11215 PF03180 NLPA lipoprotein LPH58_RS11230 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LPH58_RS11230 PF00364 Biotin-requiring enzyme LPH58_RS11230 PF02817 e3 binding domain LPH58_RS11235 PF07992 Pyridine nucleotide-disulphide oxidoreductase LPH58_RS11235 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LPH58_RS11245 PF01545 Cation efflux family LPH58_RS11250 PF01053 Cys/Met metabolism PLP-dependent enzyme LPH58_RS11255 PF00561 alpha/beta hydrolase fold LPH58_RS11260 PF01551 Peptidase family M23 LPH58_RS11265 PF01975 Survival protein SurE LPH58_RS11280 PF01551 Peptidase family M23 LPH58_RS11280 PF01476 LysM domain LPH58_RS11295 PF00842 Alanine racemase, C-terminal domain LPH58_RS11295 PF01168 Alanine racemase, N-terminal domain LPH58_RS11300 PF01266 FAD dependent oxidoreductase LPH58_RS11310 PF01641 SelR domain LPH58_RS11320 PF00728 Glycosyl hydrolase family 20, catalytic domain LPH58_RS11320 PF07691 PA14 domain LPH58_RS11320 PF02838 Glycosyl hydrolase family 20, domain 2 LPH58_RS11330 PF00933 Glycosyl hydrolase family 3 N terminal domain LPH58_RS11330 PF14310 Fibronectin type III-like domain LPH58_RS11330 PF07691 PA14 domain LPH58_RS11330 PF01915 Glycosyl hydrolase family 3 C-terminal domain LPH58_RS11345 PF07971 Glycosyl hydrolase family 92 LPH58_RS11345 PF17678 Glycosyl hydrolase family 92 N-terminal domain LPH58_RS11350 PF01301 Glycosyl hydrolases family 35 LPH58_RS11355 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LPH58_RS11360 PF00639 PPIC-type PPIASE domain LPH58_RS11360 PF09312 SurA N-terminal domain LPH58_RS11365 PF04453 LPS transport system D LPH58_RS11375 PF01494 FAD binding domain LPH58_RS11380 PF01494 FAD binding domain LPH58_RS11385 PF12833 Helix-turn-helix domain LPH58_RS11385 PF06719 AraC-type transcriptional regulator N-terminus LPH58_RS11390 PF02525 Flavodoxin-like fold LPH58_RS11400 PF03466 LysR substrate binding domain LPH58_RS11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LPH58_RS11405 PF10414 Sirohaem synthase dimerisation region LPH58_RS11405 PF14824 Sirohaem biosynthesis protein central LPH58_RS11405 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LPH58_RS11410 PF00291 Pyridoxal-phosphate dependent enzyme LPH58_RS11420 PF00274 Fructose-bisphosphate aldolase class-I LPH58_RS11430 PF00224 Pyruvate kinase, barrel domain LPH58_RS11430 PF02887 Pyruvate kinase, alpha/beta domain LPH58_RS11435 PF00162 Phosphoglycerate kinase LPH58_RS11450 PF00749 tRNA synthetases class I (E and Q), catalytic domain LPH58_RS11455 PF01475 Ferric uptake regulator family LPH58_RS11470 PF00553 Cellulose binding domain LPH58_RS11470 PF00150 Cellulase (glycosyl hydrolase family 5) LPH58_RS11480 PF00675 Insulinase (Peptidase family M16) LPH58_RS11480 PF05193 Peptidase M16 inactive domain LPH58_RS11500 PF07516 SecA Wing and Scaffold domain LPH58_RS11500 PF01043 SecA preprotein cross-linking domain LPH58_RS11500 PF02810 SEC-C motif LPH58_RS11500 PF07517 SecA DEAD-like domain LPH58_RS11505 PF01551 Peptidase family M23 LPH58_RS11505 PF08525 Opacity-associated protein A N-terminal motif LPH58_RS11505 PF01476 LysM domain LPH58_RS11515 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LPH58_RS11520 PF12327 FtsZ family, C-terminal domain LPH58_RS11520 PF00091 Tubulin/FtsZ family, GTPase domain LPH58_RS11525 PF02491 SHS2 domain inserted in FTSA LPH58_RS11530 PF08478 POTRA domain, FtsQ-type LPH58_RS11530 PF03799 Cell division protein FtsQ LPH58_RS11535 PF07478 D-ala D-ala ligase C-terminus LPH58_RS11540 PF02875 Mur ligase family, glutamate ligase domain LPH58_RS11540 PF08245 Mur ligase middle domain LPH58_RS11540 PF01225 Mur ligase family, catalytic domain LPH58_RS11545 PF04101 Glycosyltransferase family 28 C-terminal domain LPH58_RS11545 PF03033 Glycosyltransferase family 28 N-terminal domain LPH58_RS11550 PF01098 Cell cycle protein LPH58_RS11555 PF00953 Glycosyl transferase family 4 LPH58_RS11560 PF02875 Mur ligase family, glutamate ligase domain LPH58_RS11560 PF08245 Mur ligase middle domain LPH58_RS11560 PF01225 Mur ligase family, catalytic domain LPH58_RS11565 PF08245 Mur ligase middle domain LPH58_RS11565 PF02875 Mur ligase family, glutamate ligase domain LPH58_RS11565 PF01225 Mur ligase family, catalytic domain LPH58_RS11570 PF00905 Penicillin binding protein transpeptidase domain LPH58_RS11570 PF03717 Penicillin-binding Protein dimerisation domain LPH58_RS11575 PF04999 Cell division protein FtsL LPH58_RS11580 PF01795 MraW methylase family LPH58_RS11585 PF02381 MraZ protein, putative antitoxin-like LPH58_RS11590 PF03600 Citrate transporter LPH58_RS11590 PF02080 TrkA-C domain LPH58_RS11595 PF02390 Putative methyltransferase LPH58_RS11600 PF05690 Thiazole biosynthesis protein ThiG LPH58_RS11610 PF03797 Autotransporter beta-domain LPH58_RS11610 PF00657 GDSL-like Lipase/Acylhydrolase LPH58_RS11640 PF07977 FabA-like domain LPH58_RS11665 PF00692 dUTPase LPH58_RS11675 PF08676 MutL C terminal dimerisation domain LPH58_RS11675 PF01119 DNA mismatch repair protein, C-terminal domain LPH58_RS11680 PF01520 N-acetylmuramoyl-L-alanine amidase LPH58_RS11680 PF11741 AMIN domain LPH58_RS11685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LPH58_RS11690 PF03853 YjeF-related protein N-terminus LPH58_RS11690 PF01256 Carbohydrate kinase LPH58_RS11695 PF13742 OB-fold nucleic acid binding domain LPH58_RS11695 PF02601 Exonuclease VII, large subunit LPH58_RS11710 PF01612 3'-5' exonuclease LPH58_RS11710 PF00570 HRDC domain LPH58_RS11740 PF00216 Bacterial DNA-binding protein LPH58_RS11745 PF03483 B3/4 domain LPH58_RS11745 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LPH58_RS11745 PF01588 Putative tRNA binding domain LPH58_RS11745 PF03484 tRNA synthetase B5 domain LPH58_RS11745 PF03147 Ferredoxin-fold anticodon binding domain LPH58_RS11750 PF01409 tRNA synthetases class II core domain (F) LPH58_RS11750 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LPH58_RS11755 PF00453 Ribosomal protein L20 LPH58_RS11760 PF01632 Ribosomal protein L35 LPH58_RS11765 PF00707 Translation initiation factor IF-3, C-terminal domain LPH58_RS11765 PF05198 Translation initiation factor IF-3, N-terminal domain LPH58_RS11770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LPH58_RS11770 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LPH58_RS11770 PF02824 TGS domain LPH58_RS11770 PF03129 Anticodon binding domain LPH58_RS11780 PF18030 RimK PreATP-grasp domain LPH58_RS11780 PF08443 RimK-like ATP-grasp domain LPH58_RS11785 PF00486 Transcriptional regulatory protein, C terminal LPH58_RS11785 PF00072 Response regulator receiver domain LPH58_RS11790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS11790 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS11790 PF11808 Phosphate regulon sensor protein PhoR LPH58_RS11790 PF00989 PAS fold LPH58_RS11795 PF01121 Dephospho-CoA kinase LPH58_RS11800 PF06750 Bacterial Peptidase A24 N-terminal domain LPH58_RS11800 PF01478 Type IV leader peptidase family LPH58_RS11805 PF00482 Type II secretion system (T2SS), protein F LPH58_RS11810 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS11810 PF00114 Pilin (bacterial filament) LPH58_RS11820 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS11820 PF00114 Pilin (bacterial filament) LPH58_RS11825 PF07963 Prokaryotic N-terminal methylation motif LPH58_RS11825 PF00114 Pilin (bacterial filament) LPH58_RS11835 PF00437 Type II/IV secretion system protein LPH58_RS11835 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LPH58_RS11840 PF02954 Bacterial regulatory protein, Fis family LPH58_RS11840 PF00072 Response regulator receiver domain LPH58_RS11840 PF00158 Sigma-54 interaction domain LPH58_RS11845 PF00512 His Kinase A (phospho-acceptor) domain LPH58_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LPH58_RS11850 PF08442 ATP-grasp domain LPH58_RS11850 PF00549 CoA-ligase LPH58_RS11855 PF02629 CoA binding domain LPH58_RS11855 PF00549 CoA-ligase LPH58_RS11860 PF01926 50S ribosome-binding GTPase LPH58_RS11860 PF12631 MnmE helical domain LPH58_RS11860 PF10396 GTP-binding protein TrmE N-terminus LPH58_RS11870 PF02096 60Kd inner membrane protein LPH58_RS11870 PF14849 YidC periplasmic domain LPH58_RS11875 PF00825 Ribonuclease P LPH58_RS11880 PF00468 Ribosomal protein L34