##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2099068v1 #!genome-build-accession NCBI_Assembly:GCF_020990685.1 #!annotation-date 12/16/2022 03:07:37 #!annotation-source NCBI RefSeq ##sequence-region NZ_CP087690.1 1 2824907 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1444770 NZ_CP087690.1 RefSeq region 1 2824907 . + . ID=NZ_CP087690.1:1..2824907;Dbxref=taxon:1444770;Is_circular=true;Name=ANONYMOUS;country=Taiwan;gbkey=Src;genome=chromosome;isolation-source=plant tissue;mol_type=genomic DNA;strain=PLS421 NZ_CP087690.1 RefSeq gene 1 1314 . + . ID=gene-LPH58_RS00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LPH58_RS00005;old_locus_tag=LPH58_00005 NZ_CP087690.1 Protein Homology CDS 1 1314 . + 0 ID=cds-WP_038269883.1;Parent=gene-LPH58_RS00005;Dbxref=Genbank:WP_038269883.1;Name=WP_038269883.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050021.1;locus_tag=LPH58_RS00005;product=chromosomal replication initiator protein DnaA;protein_id=WP_038269883.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1586 2695 . + . ID=gene-LPH58_RS00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LPH58_RS00010;old_locus_tag=LPH58_00010 NZ_CP087690.1 Protein Homology CDS 1586 2695 . + 0 ID=cds-WP_038269626.1;Parent=gene-LPH58_RS00010;Dbxref=Genbank:WP_038269626.1;Name=WP_038269626.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451791.1;locus_tag=LPH58_RS00010;product=DNA polymerase III subunit beta;protein_id=WP_038269626.1;transl_table=11 NZ_CP087690.1 RefSeq gene 3380 4474 . + . ID=gene-LPH58_RS00015;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=LPH58_RS00015;old_locus_tag=LPH58_00015 NZ_CP087690.1 Protein Homology CDS 3380 4474 . + 0 ID=cds-WP_038269623.1;Parent=gene-LPH58_RS00015;Dbxref=Genbank:WP_038269623.1;Name=WP_038269623.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087835.1;locus_tag=LPH58_RS00015;product=DNA replication/repair protein RecF;protein_id=WP_038269623.1;transl_table=11 NZ_CP087690.1 RefSeq gene 5041 7485 . + . ID=gene-LPH58_RS00020;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LPH58_RS00020;old_locus_tag=LPH58_00020 NZ_CP087690.1 Protein Homology CDS 5041 7485 . + 0 ID=cds-WP_038269621.1;Parent=gene-LPH58_RS00020;Dbxref=Genbank:WP_038269621.1;Name=WP_038269621.1;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912438.1;locus_tag=LPH58_RS00020;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_038269621.1;transl_table=11 NZ_CP087690.1 RefSeq gene 7534 8364 . + . ID=gene-LPH58_RS00025;Name=LPH58_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00025;old_locus_tag=LPH58_00025 NZ_CP087690.1 Protein Homology CDS 7534 8364 . + 0 ID=cds-WP_081755380.1;Parent=gene-LPH58_RS00025;Dbxref=Genbank:WP_081755380.1;Name=WP_081755380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087837.1;locus_tag=LPH58_RS00025;product=CPBP family intramembrane metalloprotease;protein_id=WP_081755380.1;transl_table=11 NZ_CP087690.1 RefSeq gene 8427 9242 . + . ID=gene-LPH58_RS00030;Name=LPH58_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00030;old_locus_tag=LPH58_00030 NZ_CP087690.1 Protein Homology CDS 8427 9242 . + 0 ID=cds-WP_038269619.1;Parent=gene-LPH58_RS00030;Dbxref=Genbank:WP_038269619.1;Name=WP_038269619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087838.1;locus_tag=LPH58_RS00030;product=M48 family metallopeptidase;protein_id=WP_038269619.1;transl_table=11 NZ_CP087690.1 RefSeq gene 9328 10518 . + . ID=gene-LPH58_RS00035;Name=LPH58_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00035;old_locus_tag=LPH58_00035 NZ_CP087690.1 Protein Homology CDS 9328 10518 . + 0 ID=cds-WP_038269617.1;Parent=gene-LPH58_RS00035;Dbxref=Genbank:WP_038269617.1;Name=WP_038269617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010376399.1;locus_tag=LPH58_RS00035;product=tetratricopeptide repeat protein;protein_id=WP_038269617.1;transl_table=11 NZ_CP087690.1 RefSeq gene 11079 11738 . + . ID=gene-LPH58_RS00040;Name=LPH58_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00040;old_locus_tag=LPH58_00040 NZ_CP087690.1 Protein Homology CDS 11079 11738 . + 0 ID=cds-WP_171898037.1;Parent=gene-LPH58_RS00040;Dbxref=Genbank:WP_171898037.1;Name=WP_171898037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337543.1;locus_tag=LPH58_RS00040;product=energy transducer TonB;protein_id=WP_171898037.1;transl_table=11 NZ_CP087690.1 RefSeq gene 11815 12579 . + . ID=gene-LPH58_RS00045;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=LPH58_RS00045;old_locus_tag=LPH58_00045 NZ_CP087690.1 Protein Homology CDS 11815 12579 . + 0 ID=cds-WP_038269615.1;Parent=gene-LPH58_RS00045;Dbxref=Genbank:WP_038269615.1;Name=WP_038269615.1;gbkey=CDS;gene=exbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002805928.1;locus_tag=LPH58_RS00045;product=TonB-system energizer ExbB;protein_id=WP_038269615.1;transl_table=11 NZ_CP087690.1 RefSeq gene 12633 13055 . + . ID=gene-LPH58_RS00050;Name=LPH58_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00050;old_locus_tag=LPH58_00050 NZ_CP087690.1 Protein Homology CDS 12633 13055 . + 0 ID=cds-WP_038269613.1;Parent=gene-LPH58_RS00050;Dbxref=Genbank:WP_038269613.1;Name=WP_038269613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912447.1;locus_tag=LPH58_RS00050;product=biopolymer transporter ExbD;protein_id=WP_038269613.1;transl_table=11 NZ_CP087690.1 RefSeq gene 13059 13478 . + . ID=gene-LPH58_RS00055;Name=LPH58_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00055;old_locus_tag=LPH58_00055 NZ_CP087690.1 Protein Homology CDS 13059 13478 . + 0 ID=cds-WP_038269611.1;Parent=gene-LPH58_RS00055;Dbxref=Genbank:WP_038269611.1;Name=WP_038269611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155972.1;locus_tag=LPH58_RS00055;product=biopolymer transporter ExbD;protein_id=WP_038269611.1;transl_table=11 NZ_CP087690.1 RefSeq gene 13877 14107 . + . ID=gene-LPH58_RS00060;Name=LPH58_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00060;old_locus_tag=LPH58_00060 NZ_CP087690.1 GeneMarkS-2+ CDS 13877 14107 . + 0 ID=cds-WP_038269609.1;Parent=gene-LPH58_RS00060;Dbxref=Genbank:WP_038269609.1;Name=WP_038269609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00060;product=hypothetical protein;protein_id=WP_038269609.1;transl_table=11 NZ_CP087690.1 RefSeq gene 14451 16823 . + . ID=gene-LPH58_RS00065;Name=LPH58_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00065;old_locus_tag=LPH58_00065 NZ_CP087690.1 Protein Homology CDS 14451 16823 . + 0 ID=cds-WP_038269608.1;Parent=gene-LPH58_RS00065;Dbxref=Genbank:WP_038269608.1;Name=WP_038269608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451941.1;locus_tag=LPH58_RS00065;product=S9 family peptidase;protein_id=WP_038269608.1;transl_table=11 NZ_CP087690.1 RefSeq gene 16879 17421 . + . ID=gene-LPH58_RS00070;Name=LPH58_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00070;old_locus_tag=LPH58_00070 NZ_CP087690.1 Protein Homology CDS 16879 17421 . + 0 ID=cds-WP_038269606.1;Parent=gene-LPH58_RS00070;Dbxref=Genbank:WP_038269606.1;Name=WP_038269606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851940.1;locus_tag=LPH58_RS00070;product=hypothetical protein;protein_id=WP_038269606.1;transl_table=11 NZ_CP087690.1 RefSeq gene 17647 18561 . + . ID=gene-LPH58_RS00075;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LPH58_RS00075;old_locus_tag=LPH58_00075 NZ_CP087690.1 Protein Homology CDS 17647 18561 . + 0 ID=cds-WP_038269604.1;Parent=gene-LPH58_RS00075;Dbxref=Genbank:WP_038269604.1;Name=WP_038269604.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085079.1;locus_tag=LPH58_RS00075;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_038269604.1;transl_table=11 NZ_CP087690.1 RefSeq gene 19762 19929 . + . ID=gene-LPH58_RS00080;Name=LPH58_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00080;old_locus_tag=LPH58_00080 NZ_CP087690.1 GeneMarkS-2+ CDS 19762 19929 . + 0 ID=cds-WP_160165102.1;Parent=gene-LPH58_RS00080;Dbxref=Genbank:WP_160165102.1;Name=WP_160165102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00080;product=hypothetical protein;protein_id=WP_160165102.1;transl_table=11 NZ_CP087690.1 RefSeq gene 20023 20313 . + . ID=gene-LPH58_RS00085;Name=LPH58_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00085;old_locus_tag=LPH58_00085 NZ_CP087690.1 GeneMarkS-2+ CDS 20023 20313 . + 0 ID=cds-WP_038269602.1;Parent=gene-LPH58_RS00085;Dbxref=Genbank:WP_038269602.1;Name=WP_038269602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00085;product=hypothetical protein;protein_id=WP_038269602.1;transl_table=11 NZ_CP087690.1 RefSeq gene 20578 20910 . - . ID=gene-LPH58_RS00090;Name=LPH58_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00090;old_locus_tag=LPH58_00090 NZ_CP087690.1 GeneMarkS-2+ CDS 20578 20910 . - 0 ID=cds-WP_038269601.1;Parent=gene-LPH58_RS00090;Dbxref=Genbank:WP_038269601.1;Name=WP_038269601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00090;product=hypothetical protein;protein_id=WP_038269601.1;transl_table=11 NZ_CP087690.1 RefSeq gene 22044 22120 . - . ID=gene-LPH58_RS00095;Name=LPH58_RS00095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00095;old_locus_tag=LPH58_00095 NZ_CP087690.1 tRNAscan-SE tRNA 22044 22120 . - . ID=rna-LPH58_RS00095;Parent=gene-LPH58_RS00095;anticodon=(pos:complement(22084..22086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00095;product=tRNA-Ile NZ_CP087690.1 tRNAscan-SE exon 22044 22120 . - . ID=exon-LPH58_RS00095-1;Parent=rna-LPH58_RS00095;anticodon=(pos:complement(22084..22086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00095;product=tRNA-Ile NZ_CP087690.1 RefSeq gene 22977 24080 . - . ID=gene-LPH58_RS00100;Name=LPH58_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00100;old_locus_tag=LPH58_00100 NZ_CP087690.1 Protein Homology CDS 22977 24080 . - 0 ID=cds-WP_038269598.1;Parent=gene-LPH58_RS00100;Dbxref=Genbank:WP_038269598.1;Name=WP_038269598.1;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892575.1;locus_tag=LPH58_RS00100;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_038269598.1;transl_table=11 NZ_CP087690.1 RefSeq gene 24187 24315 . - . ID=gene-LPH58_RS11885;Name=LPH58_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11885 NZ_CP087690.1 GeneMarkS-2+ CDS 24187 24315 . - 0 ID=cds-WP_267903164.1;Parent=gene-LPH58_RS11885;Dbxref=Genbank:WP_267903164.1;Name=WP_267903164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11885;product=hypothetical protein;protein_id=WP_267903164.1;transl_table=11 NZ_CP087690.1 RefSeq gene 26075 26638 . + . ID=gene-LPH58_RS00105;Name=LPH58_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00105;old_locus_tag=LPH58_00105 NZ_CP087690.1 Protein Homology CDS 26075 26638 . + 0 ID=cds-WP_038269594.1;Parent=gene-LPH58_RS00105;Dbxref=Genbank:WP_038269594.1;Name=WP_038269594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087851.1;locus_tag=LPH58_RS00105;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_038269594.1;transl_table=11 NZ_CP087690.1 RefSeq gene 26648 27124 . + . ID=gene-LPH58_RS00110;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LPH58_RS00110;old_locus_tag=LPH58_00110 NZ_CP087690.1 Protein Homology CDS 26648 27124 . + 0 ID=cds-WP_038269593.1;Parent=gene-LPH58_RS00110;Dbxref=Genbank:WP_038269593.1;Name=WP_038269593.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087852.1;locus_tag=LPH58_RS00110;product=type IV pilus modification protein PilV;protein_id=WP_038269593.1;transl_table=11 NZ_CP087690.1 RefSeq gene 27121 28077 . + . ID=gene-LPH58_RS00115;Name=LPH58_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00115;old_locus_tag=LPH58_00115 NZ_CP087690.1 Protein Homology CDS 27121 28077 . + 0 ID=cds-WP_038269591.1;Parent=gene-LPH58_RS00115;Dbxref=Genbank:WP_038269591.1;Name=WP_038269591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085075.1;locus_tag=LPH58_RS00115;product=PilW family protein;protein_id=WP_038269591.1;transl_table=11 NZ_CP087690.1 RefSeq gene 28074 28661 . + . ID=gene-LPH58_RS00120;Name=LPH58_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00120;old_locus_tag=LPH58_00120 NZ_CP087690.1 Protein Homology CDS 28074 28661 . + 0 ID=cds-WP_038269588.1;Parent=gene-LPH58_RS00120;Dbxref=Genbank:WP_038269588.1;Name=WP_038269588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085074.1;locus_tag=LPH58_RS00120;product=pilus assembly protein;protein_id=WP_038269588.1;transl_table=11 NZ_CP087690.1 RefSeq gene 28687 32367 . + . ID=gene-LPH58_RS00125;Name=LPH58_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00125;old_locus_tag=LPH58_00125 NZ_CP087690.1 Protein Homology CDS 28687 32367 . + 0 ID=cds-WP_114867048.1;Parent=gene-LPH58_RS00125;Dbxref=Genbank:WP_114867048.1;Name=WP_114867048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097477.1;locus_tag=LPH58_RS00125;product=pilus assembly protein;protein_id=WP_114867048.1;transl_table=11 NZ_CP087690.1 RefSeq gene 32394 32792 . + . ID=gene-LPH58_RS00130;Name=LPH58_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00130;old_locus_tag=LPH58_00130 NZ_CP087690.1 Protein Homology CDS 32394 32792 . + 0 ID=cds-WP_230428264.1;Parent=gene-LPH58_RS00130;Dbxref=Genbank:WP_230428264.1;Name=WP_230428264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097478.1;locus_tag=LPH58_RS00130;product=type IV pilin protein;protein_id=WP_230428264.1;transl_table=11 NZ_CP087690.1 RefSeq gene 33237 33968 . - . ID=gene-LPH58_RS00135;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LPH58_RS00135;old_locus_tag=LPH58_00135 NZ_CP087690.1 Protein Homology CDS 33237 33968 . - 0 ID=cds-WP_038272273.1;Parent=gene-LPH58_RS00135;Dbxref=Genbank:WP_038272273.1;Name=WP_038272273.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155183.1;locus_tag=LPH58_RS00135;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_038272273.1;transl_table=11 NZ_CP087690.1 RefSeq gene 35368 36570 . + . ID=gene-LPH58_RS00140;Name=LPH58_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00140;old_locus_tag=LPH58_00140 NZ_CP087690.1 Protein Homology CDS 35368 36570 . + 0 ID=cds-WP_038272274.1;Parent=gene-LPH58_RS00140;Dbxref=Genbank:WP_038272274.1;Name=WP_038272274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851929.1;locus_tag=LPH58_RS00140;product=aspartate/tyrosine/aromatic aminotransferase;protein_id=WP_038272274.1;transl_table=11 NZ_CP087690.1 RefSeq gene 37125 37529 . - . ID=gene-LPH58_RS00145;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LPH58_RS00145;old_locus_tag=LPH58_00145 NZ_CP087690.1 Protein Homology CDS 37125 37529 . - 0 ID=cds-WP_038272276.1;Parent=gene-LPH58_RS00145;Dbxref=Genbank:WP_038272276.1;Name=WP_038272276.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive ion channel activity|0008381||IEA;go_process=ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085069.1;locus_tag=LPH58_RS00145;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_038272276.1;transl_table=11 NZ_CP087690.1 RefSeq gene 37672 37827 . - . ID=gene-LPH58_RS00150;Name=LPH58_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00150;old_locus_tag=LPH58_00150 NZ_CP087690.1 GeneMarkS-2+ CDS 37672 37827 . - 0 ID=cds-WP_160165212.1;Parent=gene-LPH58_RS00150;Dbxref=Genbank:WP_160165212.1;Name=WP_160165212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00150;product=hypothetical protein;protein_id=WP_160165212.1;transl_table=11 NZ_CP087690.1 RefSeq gene 38788 39006 . + . ID=gene-LPH58_RS00155;Name=LPH58_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00155;old_locus_tag=LPH58_00155 NZ_CP087690.1 GeneMarkS-2+ CDS 38788 39006 . + 0 ID=cds-WP_152536650.1;Parent=gene-LPH58_RS00155;Dbxref=Genbank:WP_152536650.1;Name=WP_152536650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00155;product=hypothetical protein;protein_id=WP_152536650.1;transl_table=11 NZ_CP087690.1 RefSeq gene 39551 39694 . + . ID=gene-LPH58_RS00160;Name=LPH58_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00160;old_locus_tag=LPH58_00160 NZ_CP087690.1 GeneMarkS-2+ CDS 39551 39694 . + 0 ID=cds-WP_160165214.1;Parent=gene-LPH58_RS00160;Dbxref=Genbank:WP_160165214.1;Name=WP_160165214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00160;product=hypothetical protein;protein_id=WP_160165214.1;transl_table=11 NZ_CP087690.1 RefSeq gene 39767 41026 . + . ID=gene-LPH58_RS00165;Name=LPH58_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00165;old_locus_tag=LPH58_00165 NZ_CP087690.1 Protein Homology CDS 39767 41026 . + 0 ID=cds-WP_038272277.1;Parent=gene-LPH58_RS00165;Dbxref=Genbank:WP_038272277.1;Name=WP_038272277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851927.1;locus_tag=LPH58_RS00165;product=putative Na+/H+ antiporter;protein_id=WP_038272277.1;transl_table=11 NZ_CP087690.1 RefSeq gene 41638 42519 . + . ID=gene-LPH58_RS00170;Name=rlmJ;gbkey=Gene;gene=rlmJ;gene_biotype=protein_coding;locus_tag=LPH58_RS00170;old_locus_tag=LPH58_00170 NZ_CP087690.1 Protein Homology CDS 41638 42519 . + 0 ID=cds-WP_038272279.1;Parent=gene-LPH58_RS00170;Dbxref=Genbank:WP_038272279.1;Name=WP_038272279.1;Ontology_term=GO:0070475,GO:0008649;gbkey=CDS;gene=rlmJ;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851926.1;locus_tag=LPH58_RS00170;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_038272279.1;transl_table=11 NZ_CP087690.1 RefSeq gene 43261 43800 . + . ID=gene-LPH58_RS00175;Name=LPH58_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00175;old_locus_tag=LPH58_00175 NZ_CP087690.1 Protein Homology CDS 43261 43800 . + 0 ID=cds-WP_038272316.1;Parent=gene-LPH58_RS00175;Dbxref=Genbank:WP_038272316.1;Name=WP_038272316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892593.1;locus_tag=LPH58_RS00175;product=GNAT family N-acetyltransferase;protein_id=WP_038272316.1;transl_table=11 NZ_CP087690.1 RefSeq gene 43867 47451 . + . ID=gene-LPH58_RS00180;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LPH58_RS00180;old_locus_tag=LPH58_00180 NZ_CP087690.1 Protein Homology CDS 43867 47451 . + 0 ID=cds-WP_038272281.1;Parent=gene-LPH58_RS00180;Dbxref=Genbank:WP_038272281.1;Name=WP_038272281.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802759.1;locus_tag=LPH58_RS00180;product=transcription-repair coupling factor;protein_id=WP_038272281.1;transl_table=11 NZ_CP087690.1 RefSeq gene 48276 48722 . + . ID=gene-LPH58_RS00185;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LPH58_RS00185;old_locus_tag=LPH58_00185 NZ_CP087690.1 Protein Homology CDS 48276 48722 . + 0 ID=cds-WP_038272284.1;Parent=gene-LPH58_RS00185;Dbxref=Genbank:WP_038272284.1;Name=WP_038272284.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087115.1;locus_tag=LPH58_RS00185;product=type II 3-dehydroquinate dehydratase;protein_id=WP_038272284.1;transl_table=11 NZ_CP087690.1 RefSeq gene 48773 49258 . + . ID=gene-LPH58_RS00190;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LPH58_RS00190;old_locus_tag=LPH58_00190 NZ_CP087690.1 Protein Homology CDS 48773 49258 . + 0 ID=cds-WP_038272286.1;Parent=gene-LPH58_RS00190;Dbxref=Genbank:WP_038272286.1;Name=WP_038272286.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087117.1;locus_tag=LPH58_RS00190;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_038272286.1;transl_table=11 NZ_CP087690.1 RefSeq gene 49316 50683 . + . ID=gene-LPH58_RS00195;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LPH58_RS00195;old_locus_tag=LPH58_00195 NZ_CP087690.1 Protein Homology CDS 49316 50683 . + 0 ID=cds-WP_038272288.1;Parent=gene-LPH58_RS00195;Dbxref=Genbank:WP_038272288.1;Name=WP_038272288.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660825.1;locus_tag=LPH58_RS00195;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_038272288.1;transl_table=11 NZ_CP087690.1 RefSeq gene 51214 53400 . - . ID=gene-LPH58_RS00200;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=LPH58_RS00200;old_locus_tag=LPH58_00200 NZ_CP087690.1 Protein Homology CDS 51214 53400 . - 0 ID=cds-WP_038272290.1;Parent=gene-LPH58_RS00200;Dbxref=Genbank:WP_038272290.1;Name=WP_038272290.1;Ontology_term=GO:0006281,GO:0003678;gbkey=CDS;gene=uvrD;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809467.1;locus_tag=LPH58_RS00200;product=DNA helicase II;protein_id=WP_038272290.1;transl_table=11 NZ_CP087690.1 RefSeq gene 53839 54180 . - . ID=gene-LPH58_RS00205;Name=LPH58_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00205;old_locus_tag=LPH58_00205 NZ_CP087690.1 GeneMarkS-2+ CDS 53839 54180 . - 0 ID=cds-WP_152536651.1;Parent=gene-LPH58_RS00205;Dbxref=Genbank:WP_152536651.1;Name=WP_152536651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00205;product=hypothetical protein;protein_id=WP_152536651.1;transl_table=11 NZ_CP087690.1 RefSeq gene 54270 55463 . + . ID=gene-LPH58_RS00210;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LPH58_RS00210;old_locus_tag=LPH58_00210 NZ_CP087690.1 Protein Homology CDS 54270 55463 . + 0 ID=cds-WP_038272293.1;Parent=gene-LPH58_RS00210;Dbxref=Genbank:WP_038272293.1;Name=WP_038272293.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851920.1;locus_tag=LPH58_RS00210;product=NO-inducible flavohemoprotein;protein_id=WP_038272293.1;transl_table=11 NZ_CP087690.1 RefSeq gene 57776 58054 . + . ID=gene-LPH58_RS00215;Name=LPH58_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00215;old_locus_tag=LPH58_00215 NZ_CP087690.1 Protein Homology CDS 57776 58054 . + 0 ID=cds-WP_038272319.1;Parent=gene-LPH58_RS00215;Dbxref=Genbank:WP_038272319.1;Name=WP_038272319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852838.1;locus_tag=LPH58_RS00215;product=DUF2244 domain-containing protein;protein_id=WP_038272319.1;transl_table=11 NZ_CP087690.1 RefSeq gene 58051 58833 . + . ID=gene-LPH58_RS00220;Name=LPH58_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00220;old_locus_tag=LPH58_00220 NZ_CP087690.1 Protein Homology CDS 58051 58833 . + 0 ID=cds-WP_038272298.1;Parent=gene-LPH58_RS00220;Dbxref=Genbank:WP_038272298.1;Name=WP_038272298.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085059.1;locus_tag=LPH58_RS00220;product=pyridoxine 5'-phosphate synthase;protein_id=WP_038272298.1;transl_table=11 NZ_CP087690.1 RefSeq gene 60307 61350 . - . ID=gene-LPH58_RS00225;Name=LPH58_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00225;old_locus_tag=LPH58_00225 NZ_CP087690.1 Protein Homology CDS 60307 61350 . - 0 ID=cds-WP_038272299.1;Parent=gene-LPH58_RS00225;Dbxref=Genbank:WP_038272299.1;Name=WP_038272299.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087145.1;locus_tag=LPH58_RS00225;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_038272299.1;transl_table=11 NZ_CP087690.1 RefSeq gene 63039 63200 . - . ID=gene-LPH58_RS00230;Name=LPH58_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00230;old_locus_tag=LPH58_00230 NZ_CP087690.1 GeneMarkS-2+ CDS 63039 63200 . - 0 ID=cds-WP_160165215.1;Parent=gene-LPH58_RS00230;Dbxref=Genbank:WP_160165215.1;Name=WP_160165215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00230;product=hypothetical protein;protein_id=WP_160165215.1;transl_table=11 NZ_CP087690.1 RefSeq gene 63569 64285 . - . ID=gene-LPH58_RS00235;Name=LPH58_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00235;old_locus_tag=LPH58_00235 NZ_CP087690.1 Protein Homology CDS 63569 64285 . - 0 ID=cds-WP_038272305.1;Parent=gene-LPH58_RS00235;Dbxref=Genbank:WP_038272305.1;Name=WP_038272305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852835.1;locus_tag=LPH58_RS00235;product=ComF family protein;protein_id=WP_038272305.1;transl_table=11 NZ_CP087690.1 RefSeq gene 64335 65360 . + . ID=gene-LPH58_RS00240;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LPH58_RS00240;old_locus_tag=LPH58_00240 NZ_CP087690.1 Protein Homology CDS 64335 65360 . + 0 ID=cds-WP_038272321.1;Parent=gene-LPH58_RS00240;Dbxref=Genbank:WP_038272321.1;Name=WP_038272321.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892613.1;locus_tag=LPH58_RS00240;product=biotin synthase BioB;protein_id=WP_038272321.1;transl_table=11 NZ_CP087690.1 RefSeq gene 65747 66784 . + . ID=gene-LPH58_RS00245;Name=LPH58_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00245;old_locus_tag=LPH58_00245 NZ_CP087690.1 Protein Homology CDS 65747 66784 . + 0 ID=cds-WP_038272307.1;Parent=gene-LPH58_RS00245;Dbxref=Genbank:WP_038272307.1;Name=WP_038272307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085056.1;locus_tag=LPH58_RS00245;product=patatin-like phospholipase family protein;protein_id=WP_038272307.1;transl_table=11 NZ_CP087690.1 RefSeq gene 67803 68702 . - . ID=gene-LPH58_RS00250;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LPH58_RS00250;old_locus_tag=LPH58_00250 NZ_CP087690.1 Protein Homology CDS 67803 68702 . - 0 ID=cds-WP_038272309.1;Parent=gene-LPH58_RS00250;Dbxref=Genbank:WP_038272309.1;Name=WP_038272309.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085055.1;locus_tag=LPH58_RS00250;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_038272309.1;transl_table=11 NZ_CP087690.1 RefSeq gene 68809 68885 . + . ID=gene-LPH58_RS00255;Name=LPH58_RS00255;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00255;old_locus_tag=LPH58_00255 NZ_CP087690.1 tRNAscan-SE tRNA 68809 68885 . + . ID=rna-LPH58_RS00255;Parent=gene-LPH58_RS00255;anticodon=(pos:68843..68845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00255;product=tRNA-Arg NZ_CP087690.1 tRNAscan-SE exon 68809 68885 . + . ID=exon-LPH58_RS00255-1;Parent=rna-LPH58_RS00255;anticodon=(pos:68843..68845);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00255;product=tRNA-Arg NZ_CP087690.1 RefSeq gene 69776 69949 . + . ID=gene-LPH58_RS00260;Name=LPH58_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00260;old_locus_tag=LPH58_00260 NZ_CP087690.1 GeneMarkS-2+ CDS 69776 69949 . + 0 ID=cds-WP_160165216.1;Parent=gene-LPH58_RS00260;Dbxref=Genbank:WP_160165216.1;Name=WP_160165216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00260;product=hypothetical protein;protein_id=WP_160165216.1;transl_table=11 NZ_CP087690.1 RefSeq gene 70617 70958 . - . ID=gene-LPH58_RS00265;Name=LPH58_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00265;old_locus_tag=LPH58_00265 NZ_CP087690.1 GeneMarkS-2+ CDS 70617 70958 . - 0 ID=cds-WP_152536652.1;Parent=gene-LPH58_RS00265;Dbxref=Genbank:WP_152536652.1;Name=WP_152536652.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00265;product=hypothetical protein;protein_id=WP_152536652.1;transl_table=11 NZ_CP087690.1 RefSeq gene 71188 72723 . + . ID=gene-LPH58_RS00270;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LPH58_RS00270;old_locus_tag=LPH58_00270 NZ_CP087690.1 Protein Homology CDS 71188 72723 . + 0 ID=cds-WP_081755472.1;Parent=gene-LPH58_RS00270;Dbxref=Genbank:WP_081755472.1;Name=WP_081755472.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852252.1;locus_tag=LPH58_RS00270;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_081755472.1;transl_table=11 NZ_CP087690.1 RefSeq gene 74405 74806 . + . ID=gene-LPH58_RS00275;Name=LPH58_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00275;old_locus_tag=LPH58_00275 NZ_CP087690.1 GeneMarkS-2+ CDS 74405 74806 . + 0 ID=cds-WP_152536653.1;Parent=gene-LPH58_RS00275;Dbxref=Genbank:WP_152536653.1;Name=WP_152536653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00275;product=hypothetical protein;protein_id=WP_152536653.1;transl_table=11 NZ_CP087690.1 RefSeq gene 77238 78782 . + . ID=gene-LPH58_RS00280;Name=LPH58_RS00280;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH58_RS00280;old_locus_tag=LPH58_00280 NZ_CP087690.1 cmsearch rRNA 77238 78782 . + . ID=rna-LPH58_RS00280;Parent=gene-LPH58_RS00280;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00280;product=16S ribosomal RNA NZ_CP087690.1 cmsearch exon 77238 78782 . + . ID=exon-LPH58_RS00280-1;Parent=rna-LPH58_RS00280;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00280;product=16S ribosomal RNA NZ_CP087690.1 RefSeq gene 78877 78952 . + . ID=gene-LPH58_RS00285;Name=LPH58_RS00285;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00285;old_locus_tag=LPH58_00285 NZ_CP087690.1 tRNAscan-SE tRNA 78877 78952 . + . ID=rna-LPH58_RS00285;Parent=gene-LPH58_RS00285;anticodon=(pos:78910..78912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00285;product=tRNA-Ala NZ_CP087690.1 tRNAscan-SE exon 78877 78952 . + . ID=exon-LPH58_RS00285-1;Parent=rna-LPH58_RS00285;anticodon=(pos:78910..78912);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00285;product=tRNA-Ala NZ_CP087690.1 RefSeq gene 78964 79040 . + . ID=gene-LPH58_RS00290;Name=LPH58_RS00290;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00290;old_locus_tag=LPH58_00290 NZ_CP087690.1 tRNAscan-SE tRNA 78964 79040 . + . ID=rna-LPH58_RS00290;Parent=gene-LPH58_RS00290;anticodon=(pos:78998..79000);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00290;product=tRNA-Ile NZ_CP087690.1 tRNAscan-SE exon 78964 79040 . + . ID=exon-LPH58_RS00290-1;Parent=rna-LPH58_RS00290;anticodon=(pos:78998..79000);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00290;product=tRNA-Ile NZ_CP087690.1 RefSeq gene 79259 82137 . + . ID=gene-LPH58_RS00295;Name=LPH58_RS00295;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH58_RS00295;old_locus_tag=LPH58_00295 NZ_CP087690.1 cmsearch rRNA 79259 82137 . + . ID=rna-LPH58_RS00295;Parent=gene-LPH58_RS00295;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00295;product=23S ribosomal RNA NZ_CP087690.1 cmsearch exon 79259 82137 . + . ID=exon-LPH58_RS00295-1;Parent=rna-LPH58_RS00295;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00295;product=23S ribosomal RNA NZ_CP087690.1 RefSeq gene 82268 82381 . + . ID=gene-LPH58_RS00300;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LPH58_RS00300;old_locus_tag=LPH58_00300 NZ_CP087690.1 cmsearch rRNA 82268 82381 . + . ID=rna-LPH58_RS00300;Parent=gene-LPH58_RS00300;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00300;product=5S ribosomal RNA NZ_CP087690.1 cmsearch exon 82268 82381 . + . ID=exon-LPH58_RS00300-1;Parent=rna-LPH58_RS00300;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00300;product=5S ribosomal RNA NZ_CP087690.1 RefSeq gene 82532 83347 . + . ID=gene-LPH58_RS00305;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LPH58_RS00305;old_locus_tag=LPH58_00305 NZ_CP087690.1 Protein Homology CDS 82532 83347 . + 0 ID=cds-WP_038273054.1;Parent=gene-LPH58_RS00305;Dbxref=Genbank:WP_038273054.1;Name=WP_038273054.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085054.1;locus_tag=LPH58_RS00305;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_038273054.1;transl_table=11 NZ_CP087690.1 RefSeq gene 83450 84214 . - . ID=gene-LPH58_RS00310;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LPH58_RS00310;old_locus_tag=LPH58_00310 NZ_CP087690.1 Protein Homology CDS 83450 84214 . - 0 ID=cds-WP_038273056.1;Parent=gene-LPH58_RS00310;Dbxref=Genbank:WP_038273056.1;Name=WP_038273056.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085053.1;locus_tag=LPH58_RS00310;product=cytochrome c biogenesis protein CcsA;protein_id=WP_038273056.1;transl_table=11 NZ_CP087690.1 RefSeq gene 84366 85733 . + . ID=gene-LPH58_RS00315;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LPH58_RS00315;old_locus_tag=LPH58_00315 NZ_CP087690.1 Protein Homology CDS 84366 85733 . + 0 ID=cds-WP_038271862.1;Parent=gene-LPH58_RS00315;Dbxref=Genbank:WP_038271862.1;Name=WP_038271862.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407905.1;locus_tag=LPH58_RS00315;product=signal recognition particle protein;protein_id=WP_038271862.1;transl_table=11 NZ_CP087690.1 RefSeq gene 86793 87590 . + . ID=gene-LPH58_RS00320;Name=LPH58_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00320;old_locus_tag=LPH58_00320 NZ_CP087690.1 Protein Homology CDS 86793 87590 . + 0 ID=cds-WP_038271859.1;Parent=gene-LPH58_RS00320;Dbxref=Genbank:WP_038271859.1;Name=WP_038271859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852873.1;locus_tag=LPH58_RS00320;product=aminotransferase class IV family protein;protein_id=WP_038271859.1;transl_table=11 NZ_CP087690.1 RefSeq gene 87987 88979 . - . ID=gene-LPH58_RS00325;Name=LPH58_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00325;old_locus_tag=LPH58_00325 NZ_CP087690.1 Protein Homology CDS 87987 88979 . - 0 ID=cds-WP_230428138.1;Parent=gene-LPH58_RS00325;Dbxref=Genbank:WP_230428138.1;Name=WP_230428138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337552.1;locus_tag=LPH58_RS00325;product=fimbrial protein;protein_id=WP_230428138.1;transl_table=11 NZ_CP087690.1 RefSeq gene 90845 91852 . - . ID=gene-LPH58_RS00330;Name=LPH58_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00330;old_locus_tag=LPH58_00330 NZ_CP087690.1 Protein Homology CDS 90845 91852 . - 0 ID=cds-WP_230428139.1;Parent=gene-LPH58_RS00330;Dbxref=Genbank:WP_230428139.1;Name=WP_230428139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337552.1;locus_tag=LPH58_RS00330;product=fimbrial protein;protein_id=WP_230428139.1;transl_table=11 NZ_CP087690.1 RefSeq gene 91906 94611 . - . ID=gene-LPH58_RS00335;Name=LPH58_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00335;old_locus_tag=LPH58_00335 NZ_CP087690.1 Protein Homology CDS 91906 94611 . - 0 ID=cds-WP_038271854.1;Parent=gene-LPH58_RS00335;Dbxref=Genbank:WP_038271854.1;Name=WP_038271854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085564.1;locus_tag=LPH58_RS00335;product=fimbrial biogenesis outer membrane usher protein;protein_id=WP_038271854.1;transl_table=11 NZ_CP087690.1 RefSeq gene 94639 95490 . - . ID=gene-LPH58_RS00340;Name=LPH58_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00340;old_locus_tag=LPH58_00340 NZ_CP087690.1 Protein Homology CDS 94639 95490 . - 0 ID=cds-WP_230428140.1;Parent=gene-LPH58_RS00340;Dbxref=Genbank:WP_230428140.1;Name=WP_230428140.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085563.1;locus_tag=LPH58_RS00340;product=fimbria/pilus periplasmic chaperone;protein_id=WP_230428140.1;transl_table=11 NZ_CP087690.1 RefSeq gene 95508 96062 . - . ID=gene-LPH58_RS00345;Name=LPH58_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00345;old_locus_tag=LPH58_00345 NZ_CP087690.1 Protein Homology CDS 95508 96062 . - 0 ID=cds-WP_038271866.1;Parent=gene-LPH58_RS00345;Dbxref=Genbank:WP_038271866.1;Name=WP_038271866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085562.1;locus_tag=LPH58_RS00345;product=fimbrial protein;protein_id=WP_038271866.1;transl_table=11 NZ_CP087690.1 RefSeq gene 98811 99299 . - . ID=gene-LPH58_RS00350;Name=LPH58_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00350;old_locus_tag=LPH58_00350 NZ_CP087690.1 Protein Homology CDS 98811 99299 . - 0 ID=cds-WP_038271852.1;Parent=gene-LPH58_RS00350;Dbxref=Genbank:WP_038271852.1;Name=WP_038271852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087680.1;locus_tag=LPH58_RS00350;product=CinA family protein;protein_id=WP_038271852.1;transl_table=11 NZ_CP087690.1 RefSeq gene 99383 100690 . - . ID=gene-LPH58_RS00355;Name=LPH58_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00355;old_locus_tag=LPH58_00355 NZ_CP087690.1 Protein Homology CDS 99383 100690 . - 0 ID=cds-WP_038271849.1;Parent=gene-LPH58_RS00355;Dbxref=Genbank:WP_038271849.1;Name=WP_038271849.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087678.1;locus_tag=LPH58_RS00355;product=MFS family transporter;protein_id=WP_038271849.1;transl_table=11 NZ_CP087690.1 RefSeq gene 100746 102119 . - . ID=gene-LPH58_RS00360;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LPH58_RS00360;old_locus_tag=LPH58_00360 NZ_CP087690.1 Protein Homology CDS 100746 102119 . - 0 ID=cds-WP_038271847.1;Parent=gene-LPH58_RS00360;Dbxref=Genbank:WP_038271847.1;Name=WP_038271847.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853003.1;locus_tag=LPH58_RS00360;product=GTPase HflX;protein_id=WP_038271847.1;transl_table=11 NZ_CP087690.1 RefSeq gene 102134 102412 . - . ID=gene-LPH58_RS00365;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LPH58_RS00365;old_locus_tag=LPH58_00365 NZ_CP087690.1 Protein Homology CDS 102134 102412 . - 0 ID=cds-WP_038271845.1;Parent=gene-LPH58_RS00365;Dbxref=Genbank:WP_038271845.1;Name=WP_038271845.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085558.1;locus_tag=LPH58_RS00365;product=RNA chaperone Hfq;protein_id=WP_038271845.1;transl_table=11 NZ_CP087690.1 RefSeq gene 102486 103469 . - . ID=gene-LPH58_RS00370;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LPH58_RS00370;old_locus_tag=LPH58_00370 NZ_CP087690.1 Protein Homology CDS 102486 103469 . - 0 ID=cds-WP_038271843.1;Parent=gene-LPH58_RS00370;Dbxref=Genbank:WP_038271843.1;Name=WP_038271843.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507485.1;locus_tag=LPH58_RS00370;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_038271843.1;transl_table=11 NZ_CP087690.1 RefSeq gene 103469 104356 . - . ID=gene-LPH58_RS00375;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LPH58_RS00375;old_locus_tag=LPH58_00375 NZ_CP087690.1 Protein Homology CDS 103469 104356 . - 0 ID=cds-WP_038271841.1;Parent=gene-LPH58_RS00375;Dbxref=Genbank:WP_038271841.1;Name=WP_038271841.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268106.1;locus_tag=LPH58_RS00375;product=dihydropteroate synthase;protein_id=WP_038271841.1;transl_table=11 NZ_CP087690.1 RefSeq gene 104642 106573 . - . ID=gene-LPH58_RS00380;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LPH58_RS00380;old_locus_tag=LPH58_00380 NZ_CP087690.1 Protein Homology CDS 104642 106573 . - 0 ID=cds-WP_038271839.1;Parent=gene-LPH58_RS00380;Dbxref=Genbank:WP_038271839.1;Name=WP_038271839.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019399873.1;locus_tag=LPH58_RS00380;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_038271839.1;transl_table=11 NZ_CP087690.1 RefSeq gene 106626 107267 . - . ID=gene-LPH58_RS00385;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=LPH58_RS00385;old_locus_tag=LPH58_00385 NZ_CP087690.1 Protein Homology CDS 106626 107267 . - 0 ID=cds-WP_038271837.1;Parent=gene-LPH58_RS00385;Dbxref=Genbank:WP_038271837.1;Name=WP_038271837.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851792.1;locus_tag=LPH58_RS00385;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_038271837.1;transl_table=11 NZ_CP087690.1 RefSeq gene 107336 107641 . + . ID=gene-LPH58_RS00390;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=LPH58_RS00390;old_locus_tag=LPH58_00390 NZ_CP087690.1 Protein Homology CDS 107336 107641 . + 0 ID=cds-WP_038271836.1;Parent=gene-LPH58_RS00390;Dbxref=Genbank:WP_038271836.1;Name=WP_038271836.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300317.1;locus_tag=LPH58_RS00390;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_038271836.1;transl_table=11 NZ_CP087690.1 RefSeq gene 107660 108049 . + . ID=gene-LPH58_RS00395;Name=LPH58_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00395;old_locus_tag=LPH58_00395 NZ_CP087690.1 Protein Homology CDS 107660 108049 . + 0 ID=cds-WP_038271835.1;Parent=gene-LPH58_RS00395;Dbxref=Genbank:WP_038271835.1;Name=WP_038271835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085551.1;locus_tag=LPH58_RS00395;product=MTH938/NDUFAF3 family protein;protein_id=WP_038271835.1;transl_table=11 NZ_CP087690.1 RefSeq gene 108594 108788 . + . ID=gene-LPH58_RS00400;Name=LPH58_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00400;old_locus_tag=LPH58_00400 NZ_CP087690.1 GeneMarkS-2+ CDS 108594 108788 . + 0 ID=cds-WP_038271834.1;Parent=gene-LPH58_RS00400;Dbxref=Genbank:WP_038271834.1;Name=WP_038271834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00400;product=hypothetical protein;protein_id=WP_038271834.1;transl_table=11 NZ_CP087690.1 RefSeq gene 108866 110704 . - . ID=gene-LPH58_RS00405;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LPH58_RS00405;old_locus_tag=LPH58_00405 NZ_CP087690.1 Protein Homology CDS 108866 110704 . - 0 ID=cds-WP_038271833.1;Parent=gene-LPH58_RS00405;Dbxref=Genbank:WP_038271833.1;Name=WP_038271833.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437115.1;locus_tag=LPH58_RS00405;product=dihydroxy-acid dehydratase;protein_id=WP_038271833.1;transl_table=11 NZ_CP087690.1 RefSeq gene 111360 111530 . + . ID=gene-LPH58_RS00410;Name=LPH58_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00410;old_locus_tag=LPH58_00410 NZ_CP087690.1 GeneMarkS-2+ CDS 111360 111530 . + 0 ID=cds-WP_160165199.1;Parent=gene-LPH58_RS00410;Dbxref=Genbank:WP_160165199.1;Name=WP_160165199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00410;product=hypothetical protein;protein_id=WP_160165199.1;transl_table=11 NZ_CP087690.1 RefSeq gene 111647 111796 . - . ID=gene-LPH58_RS00415;Name=LPH58_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00415;old_locus_tag=LPH58_00415 NZ_CP087690.1 GeneMarkS-2+ CDS 111647 111796 . - 0 ID=cds-WP_160165198.1;Parent=gene-LPH58_RS00415;Dbxref=Genbank:WP_160165198.1;Name=WP_160165198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00415;product=hypothetical protein;protein_id=WP_160165198.1;transl_table=11 NZ_CP087690.1 RefSeq gene 112097 112294 . + . ID=gene-LPH58_RS00420;Name=LPH58_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00420;old_locus_tag=LPH58_00420 NZ_CP087690.1 Protein Homology CDS 112097 112294 . + 0 ID=cds-WP_038271831.1;Parent=gene-LPH58_RS00420;Dbxref=Genbank:WP_038271831.1;Name=WP_038271831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483377.1;locus_tag=LPH58_RS00420;product=zinc-finger domain-containing protein;protein_id=WP_038271831.1;transl_table=11 NZ_CP087690.1 RefSeq gene 112310 113422 . + . ID=gene-LPH58_RS00425;Name=LPH58_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00425;old_locus_tag=LPH58_00425 NZ_CP087690.1 Protein Homology CDS 112310 113422 . + 0 ID=cds-WP_038271830.1;Parent=gene-LPH58_RS00425;Dbxref=Genbank:WP_038271830.1;Name=WP_038271830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851795.1;locus_tag=LPH58_RS00425;product=glycosyltransferase;protein_id=WP_038271830.1;transl_table=11 NZ_CP087690.1 RefSeq gene 113403 114749 . + . ID=gene-LPH58_RS00430;Name=LPH58_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00430;old_locus_tag=LPH58_00430 NZ_CP087690.1 Protein Homology CDS 113403 114749 . + 0 ID=cds-WP_038271829.1;Parent=gene-LPH58_RS00430;Dbxref=Genbank:WP_038271829.1;Name=WP_038271829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851796.1;locus_tag=LPH58_RS00430;product=O-antigen ligase;protein_id=WP_038271829.1;transl_table=11 NZ_CP087690.1 RefSeq gene 114946 115866 . - . ID=gene-LPH58_RS00435;Name=LPH58_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00435;old_locus_tag=LPH58_00435 NZ_CP087690.1 Protein Homology CDS 114946 115866 . - 0 ID=cds-WP_038271828.1;Parent=gene-LPH58_RS00435;Dbxref=Genbank:WP_038271828.1;Name=WP_038271828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851797.1;locus_tag=LPH58_RS00435;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=WP_038271828.1;transl_table=11 NZ_CP087690.1 RefSeq gene 115947 117257 . + . ID=gene-LPH58_RS00440;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LPH58_RS00440;old_locus_tag=LPH58_00440 NZ_CP087690.1 Protein Homology CDS 115947 117257 . + 0 ID=cds-WP_038271827.1;Parent=gene-LPH58_RS00440;Dbxref=Genbank:WP_038271827.1;Name=WP_038271827.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097494.1;locus_tag=LPH58_RS00440;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_038271827.1;transl_table=11 NZ_CP087690.1 RefSeq gene 118640 120022 . + . ID=gene-LPH58_RS00445;Name=LPH58_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00445;old_locus_tag=LPH58_00445 NZ_CP087690.1 Protein Homology CDS 118640 120022 . + 0 ID=cds-WP_038271826.1;Parent=gene-LPH58_RS00445;Dbxref=Genbank:WP_038271826.1;Name=WP_038271826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085544.1;locus_tag=LPH58_RS00445;product=alpha-L-fucosidase;protein_id=WP_038271826.1;transl_table=11 NZ_CP087690.1 RefSeq gene 121332 121592 . + . ID=gene-LPH58_RS00450;Name=LPH58_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00450;old_locus_tag=LPH58_00450 NZ_CP087690.1 GeneMarkS-2+ CDS 121332 121592 . + 0 ID=cds-WP_152536642.1;Parent=gene-LPH58_RS00450;Dbxref=Genbank:WP_152536642.1;Name=WP_152536642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00450;product=hypothetical protein;protein_id=WP_152536642.1;transl_table=11 NZ_CP087690.1 RefSeq gene 122251 122436 . + . ID=gene-LPH58_RS00455;Name=LPH58_RS00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00455;old_locus_tag=LPH58_00455 NZ_CP087690.1 GeneMarkS-2+ CDS 122251 122436 . + 0 ID=cds-WP_160165197.1;Parent=gene-LPH58_RS00455;Dbxref=Genbank:WP_160165197.1;Name=WP_160165197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00455;product=hypothetical protein;protein_id=WP_160165197.1;transl_table=11 NZ_CP087690.1 RefSeq gene 122887 123147 . + . ID=gene-LPH58_RS00460;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LPH58_RS00460;old_locus_tag=LPH58_00460 NZ_CP087690.1 Protein Homology CDS 122887 123147 . + 0 ID=cds-WP_038271824.1;Parent=gene-LPH58_RS00460;Dbxref=Genbank:WP_038271824.1;Name=WP_038271824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036396.1;locus_tag=LPH58_RS00460;product=30S ribosomal protein S16;protein_id=WP_038271824.1;transl_table=11 NZ_CP087690.1 RefSeq gene 123192 123704 . + . ID=gene-LPH58_RS00465;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LPH58_RS00465;old_locus_tag=LPH58_00465 NZ_CP087690.1 Protein Homology CDS 123192 123704 . + 0 ID=cds-WP_038271823.1;Parent=gene-LPH58_RS00465;Dbxref=Genbank:WP_038271823.1;Name=WP_038271823.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085542.1;locus_tag=LPH58_RS00465;product=ribosome maturation factor RimM;protein_id=WP_038271823.1;transl_table=11 NZ_CP087690.1 RefSeq gene 123816 124589 . + . ID=gene-LPH58_RS00470;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LPH58_RS00470;old_locus_tag=LPH58_00470 NZ_CP087690.1 Protein Homology CDS 123816 124589 . + 0 ID=cds-WP_038271822.1;Parent=gene-LPH58_RS00470;Dbxref=Genbank:WP_038271822.1;Name=WP_038271822.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892655.1;locus_tag=LPH58_RS00470;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_038271822.1;transl_table=11 NZ_CP087690.1 RefSeq gene 124765 125175 . + . ID=gene-LPH58_RS00475;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LPH58_RS00475;old_locus_tag=LPH58_00475 NZ_CP087690.1 Protein Homology CDS 124765 125175 . + 0 ID=cds-WP_038271821.1;Parent=gene-LPH58_RS00475;Dbxref=Genbank:WP_038271821.1;Name=WP_038271821.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892656.1;locus_tag=LPH58_RS00475;product=50S ribosomal protein L19;protein_id=WP_038271821.1;transl_table=11 NZ_CP087690.1 RefSeq gene 125745 126521 . + . ID=gene-LPH58_RS00480;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LPH58_RS00480;old_locus_tag=LPH58_00480 NZ_CP087690.1 Protein Homology CDS 125745 126521 . + 0 ID=cds-WP_038271820.1;Parent=gene-LPH58_RS00480;Dbxref=Genbank:WP_038271820.1;Name=WP_038271820.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085539.1;locus_tag=LPH58_RS00480;product=type I methionyl aminopeptidase;protein_id=WP_038271820.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 126561 129137 . + . ID=gene-LPH58_RS00485;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=pseudogene;locus_tag=LPH58_RS00485;old_locus_tag=LPH58_00485;pseudo=true NZ_CP087690.1 Protein Homology CDS 126561 129137 . + 0 ID=cds-LPH58_RS00485;Parent=gene-LPH58_RS00485;Note=frameshifted%3B internal stop;Ontology_term=GO:0018177,GO:0008773;gbkey=CDS;gene=glnD;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=protein uridylylation|0018177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810763.1;locus_tag=LPH58_RS00485;product=[protein-PII] uridylyltransferase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 129134 130033 . + . ID=gene-LPH58_RS00490;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LPH58_RS00490;old_locus_tag=LPH58_00490 NZ_CP087690.1 Protein Homology CDS 129134 130033 . + 0 ID=cds-WP_038271818.1;Parent=gene-LPH58_RS00490;Dbxref=Genbank:WP_038271818.1;Name=WP_038271818.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851801.1;locus_tag=LPH58_RS00490;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_038271818.1;transl_table=11 NZ_CP087690.1 RefSeq gene 130048 130404 . + . ID=gene-LPH58_RS00495;Name=LPH58_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00495;old_locus_tag=LPH58_00495 NZ_CP087690.1 Protein Homology CDS 130048 130404 . + 0 ID=cds-WP_038271816.1;Parent=gene-LPH58_RS00495;Dbxref=Genbank:WP_038271816.1;Name=WP_038271816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115327.1;locus_tag=LPH58_RS00495;product=Spx/MgsR family RNA polymerase-binding regulatory protein;protein_id=WP_038271816.1;transl_table=11 NZ_CP087690.1 RefSeq gene 130555 131688 . + . ID=gene-LPH58_RS00500;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LPH58_RS00500;old_locus_tag=LPH58_00500 NZ_CP087690.1 Protein Homology CDS 130555 131688 . + 0 ID=cds-WP_038271813.1;Parent=gene-LPH58_RS00500;Dbxref=Genbank:WP_038271813.1;Name=WP_038271813.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097497.1;locus_tag=LPH58_RS00500;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_038271813.1;transl_table=11 NZ_CP087690.1 RefSeq gene 132090 133781 . + . ID=gene-LPH58_RS00505;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LPH58_RS00505;old_locus_tag=LPH58_00505 NZ_CP087690.1 Protein Homology CDS 132090 133781 . + 0 ID=cds-WP_038271812.1;Parent=gene-LPH58_RS00505;Dbxref=Genbank:WP_038271812.1;Name=WP_038271812.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268785.1;locus_tag=LPH58_RS00505;product=asparagine synthase B;protein_id=WP_038271812.1;transl_table=11 NZ_CP087690.1 RefSeq gene 133840 134865 . - . ID=gene-LPH58_RS00510;Name=LPH58_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00510;old_locus_tag=LPH58_00510 NZ_CP087690.1 Protein Homology CDS 133840 134865 . - 0 ID=cds-WP_038271810.1;Parent=gene-LPH58_RS00510;Dbxref=Genbank:WP_038271810.1;Name=WP_038271810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155705.1;locus_tag=LPH58_RS00510;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_038271810.1;transl_table=11 NZ_CP087690.1 RefSeq gene 136355 137383 . + . ID=gene-LPH58_RS00515;Name=LPH58_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00515;old_locus_tag=LPH58_00515 NZ_CP087690.1 Protein Homology CDS 136355 137383 . + 0 ID=cds-WP_201745795.1;Parent=gene-LPH58_RS00515;Dbxref=Genbank:WP_201745795.1;Name=WP_201745795.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085533.1;locus_tag=LPH58_RS00515;product=nitronate monooxygenase;protein_id=WP_201745795.1;transl_table=11 NZ_CP087690.1 RefSeq gene 138290 138445 . - . ID=gene-LPH58_RS00520;Name=LPH58_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00520;old_locus_tag=LPH58_00520 NZ_CP087690.1 GeneMarkS-2+ CDS 138290 138445 . - 0 ID=cds-WP_160165196.1;Parent=gene-LPH58_RS00520;Dbxref=Genbank:WP_160165196.1;Name=WP_160165196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00520;product=hypothetical protein;protein_id=WP_160165196.1;transl_table=11 NZ_CP087690.1 RefSeq gene 139283 139918 . + . ID=gene-LPH58_RS00525;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LPH58_RS00525;old_locus_tag=LPH58_00525 NZ_CP087690.1 Protein Homology CDS 139283 139918 . + 0 ID=cds-WP_038271803.1;Parent=gene-LPH58_RS00525;Dbxref=Genbank:WP_038271803.1;Name=WP_038271803.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269877.1;locus_tag=LPH58_RS00525;product=transcriptional repressor LexA;protein_id=WP_038271803.1;transl_table=11 NZ_CP087690.1 RefSeq gene 140099 141136 . + . ID=gene-LPH58_RS00530;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LPH58_RS00530;old_locus_tag=LPH58_00530 NZ_CP087690.1 Protein Homology CDS 140099 141136 . + 0 ID=cds-WP_038271801.1;Parent=gene-LPH58_RS00530;Dbxref=Genbank:WP_038271801.1;Name=WP_038271801.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992375.1;locus_tag=LPH58_RS00530;product=recombinase RecA;protein_id=WP_038271801.1;transl_table=11 NZ_CP087690.1 RefSeq gene 141852 144503 . + . ID=gene-LPH58_RS00535;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LPH58_RS00535;old_locus_tag=LPH58_00535 NZ_CP087690.1 Protein Homology CDS 141852 144503 . + 0 ID=cds-WP_038271800.1;Parent=gene-LPH58_RS00535;Dbxref=Genbank:WP_038271800.1;Name=WP_038271800.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087615.1;locus_tag=LPH58_RS00535;product=alanine--tRNA ligase;protein_id=WP_038271800.1;transl_table=11 NZ_CP087690.1 RefSeq gene 144643 144858 . + . ID=gene-LPH58_RS00540;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=LPH58_RS00540;old_locus_tag=LPH58_00540 NZ_CP087690.1 Protein Homology CDS 144643 144858 . + 0 ID=cds-WP_038271798.1;Parent=gene-LPH58_RS00540;Dbxref=Genbank:WP_038271798.1;Name=WP_038271798.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085529.1;locus_tag=LPH58_RS00540;product=carbon storage regulator CsrA;protein_id=WP_038271798.1;transl_table=11 NZ_CP087690.1 RefSeq gene 144936 145028 . + . ID=gene-LPH58_RS00545;Name=LPH58_RS00545;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00545;old_locus_tag=LPH58_00545 NZ_CP087690.1 tRNAscan-SE tRNA 144936 145028 . + . ID=rna-LPH58_RS00545;Parent=gene-LPH58_RS00545;anticodon=(pos:144970..144972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00545;product=tRNA-Ser NZ_CP087690.1 tRNAscan-SE exon 144936 145028 . + . ID=exon-LPH58_RS00545-1;Parent=rna-LPH58_RS00545;anticodon=(pos:144970..144972);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00545;product=tRNA-Ser NZ_CP087690.1 RefSeq gene 146029 148053 . - . ID=gene-LPH58_RS00550;Name=LPH58_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00550;old_locus_tag=LPH58_00550 NZ_CP087690.1 Protein Homology CDS 146029 148053 . - 0 ID=cds-WP_038271796.1;Parent=gene-LPH58_RS00550;Dbxref=Genbank:WP_038271796.1;Name=WP_038271796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892672.1;locus_tag=LPH58_RS00550;product=M3 family metallopeptidase;protein_id=WP_038271796.1;transl_table=11 NZ_CP087690.1 RefSeq gene 148112 149218 . - . ID=gene-LPH58_RS00555;Name=LPH58_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00555;old_locus_tag=LPH58_00555 NZ_CP087690.1 Protein Homology CDS 148112 149218 . - 0 ID=cds-WP_038271794.1;Parent=gene-LPH58_RS00555;Dbxref=Genbank:WP_038271794.1;Name=WP_038271794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304765.1;locus_tag=LPH58_RS00555;product=PLP-dependent cysteine synthase family protein;protein_id=WP_038271794.1;transl_table=11 NZ_CP087690.1 RefSeq gene 149411 150001 . + . ID=gene-LPH58_RS00560;Name=LPH58_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00560;old_locus_tag=LPH58_00560 NZ_CP087690.1 Protein Homology CDS 149411 150001 . + 0 ID=cds-WP_230428142.1;Parent=gene-LPH58_RS00560;Dbxref=Genbank:WP_230428142.1;Name=WP_230428142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852913.1;locus_tag=LPH58_RS00560;product=CopL family metal-binding regulatory protein;protein_id=WP_230428142.1;transl_table=11 NZ_CP087690.1 RefSeq gene 150104 151927 . + . ID=gene-LPH58_RS00565;Name=LPH58_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00565;old_locus_tag=LPH58_00565 NZ_CP087690.1 Protein Homology CDS 150104 151927 . + 0 ID=cds-WP_038271792.1;Parent=gene-LPH58_RS00565;Dbxref=Genbank:WP_038271792.1;Name=WP_038271792.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507;gbkey=CDS;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337562.1;locus_tag=LPH58_RS00565;product=copper resistance system multicopper oxidase;protein_id=WP_038271792.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 152149 152322 . + . ID=gene-LPH58_RS11890;Name=LPH58_RS11890;end_range=152322,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11890;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 152149 152322 . + 0 ID=cds-LPH58_RS11890;Parent=gene-LPH58_RS11890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=152322,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032491577.1;locus_tag=LPH58_RS11890;partial=true;product=copper resistance protein B;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 152641 153249 . + . ID=gene-LPH58_RS00570;Name=LPH58_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00570;old_locus_tag=LPH58_00570 NZ_CP087690.1 Protein Homology CDS 152641 153249 . + 0 ID=cds-WP_267903178.1;Parent=gene-LPH58_RS00570;Dbxref=Genbank:WP_267903178.1;Name=WP_267903178.1;Ontology_term=GO:0006878,GO:0005507,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=copper ion binding|0005507||IEA;go_process=cellular copper ion homeostasis|0006878||IEA;inference=COORDINATES: protein motif:HMM:NF017119.2;locus_tag=LPH58_RS00570;product=copper resistance protein B;protein_id=WP_267903178.1;transl_table=11 NZ_CP087690.1 RefSeq gene 153905 156871 . - . ID=gene-LPH58_RS00575;Name=LPH58_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00575;old_locus_tag=LPH58_00575 NZ_CP087690.1 Protein Homology CDS 153905 156871 . - 0 ID=cds-WP_038272400.1;Parent=gene-LPH58_RS00575;Dbxref=Genbank:WP_038272400.1;Name=WP_038272400.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087603.1;locus_tag=LPH58_RS00575;product=valine--tRNA ligase;protein_id=WP_038272400.1;transl_table=11 NZ_CP087690.1 RefSeq gene 156909 157106 . - . ID=gene-LPH58_RS00580;Name=LPH58_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00580;old_locus_tag=LPH58_00580 NZ_CP087690.1 Protein Homology CDS 156909 157106 . - 0 ID=cds-WP_038272397.1;Parent=gene-LPH58_RS00580;Dbxref=Genbank:WP_038272397.1;Name=WP_038272397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097503.1;locus_tag=LPH58_RS00580;product=hypothetical protein;protein_id=WP_038272397.1;transl_table=11 NZ_CP087690.1 RefSeq gene 157141 157566 . - . ID=gene-LPH58_RS00585;Name=LPH58_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00585;old_locus_tag=LPH58_00585 NZ_CP087690.1 Protein Homology CDS 157141 157566 . - 0 ID=cds-WP_038272394.1;Parent=gene-LPH58_RS00585;Dbxref=Genbank:WP_038272394.1;Name=WP_038272394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902887.1;locus_tag=LPH58_RS00585;product=DNA polymerase III subunit chi;protein_id=WP_038272394.1;transl_table=11 NZ_CP087690.1 RefSeq gene 157566 158003 . - . ID=gene-LPH58_RS00590;Name=LPH58_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00590;old_locus_tag=LPH58_00590 NZ_CP087690.1 Protein Homology CDS 157566 158003 . - 0 ID=cds-WP_069636220.1;Parent=gene-LPH58_RS00590;Dbxref=Genbank:WP_069636220.1;Name=WP_069636220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087600.1;locus_tag=LPH58_RS00590;product=hypothetical protein;protein_id=WP_069636220.1;transl_table=11 NZ_CP087690.1 RefSeq gene 158018 159493 . - . ID=gene-LPH58_RS00595;Name=LPH58_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00595;old_locus_tag=LPH58_00595 NZ_CP087690.1 Protein Homology CDS 158018 159493 . - 0 ID=cds-WP_038272389.1;Parent=gene-LPH58_RS00595;Dbxref=Genbank:WP_038272389.1;Name=WP_038272389.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087599.1;locus_tag=LPH58_RS00595;product=leucyl aminopeptidase;protein_id=WP_038272389.1;transl_table=11 NZ_CP087690.1 RefSeq gene 159603 160685 . + . ID=gene-LPH58_RS00600;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LPH58_RS00600;old_locus_tag=LPH58_00600 NZ_CP087690.1 Protein Homology CDS 159603 160685 . + 0 ID=cds-WP_038272386.1;Parent=gene-LPH58_RS00600;Dbxref=Genbank:WP_038272386.1;Name=WP_038272386.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptF;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852559.1;locus_tag=LPH58_RS00600;product=LPS export ABC transporter permease LptF;protein_id=WP_038272386.1;transl_table=11 NZ_CP087690.1 RefSeq gene 160682 161791 . + . ID=gene-LPH58_RS00605;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LPH58_RS00605;old_locus_tag=LPH58_00605 NZ_CP087690.1 Protein Homology CDS 160682 161791 . + 0 ID=cds-WP_038272383.1;Parent=gene-LPH58_RS00605;Dbxref=Genbank:WP_038272383.1;Name=WP_038272383.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptG;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085518.1;locus_tag=LPH58_RS00605;product=LPS export ABC transporter permease LptG;protein_id=WP_038272383.1;transl_table=11 NZ_CP087690.1 RefSeq gene 161994 162263 . - . ID=gene-LPH58_RS00610;Name=LPH58_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00610;old_locus_tag=LPH58_00610 NZ_CP087690.1 GeneMarkS-2+ CDS 161994 162263 . - 0 ID=cds-WP_152536655.1;Parent=gene-LPH58_RS00610;Dbxref=Genbank:WP_152536655.1;Name=WP_152536655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00610;product=hypothetical protein;protein_id=WP_152536655.1;transl_table=11 NZ_CP087690.1 RefSeq gene 163114 164943 . + . ID=gene-LPH58_RS00615;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LPH58_RS00615;old_locus_tag=LPH58_00615 NZ_CP087690.1 Protein Homology CDS 163114 164943 . + 0 ID=cds-WP_038272409.1;Parent=gene-LPH58_RS00615;Dbxref=Genbank:WP_038272409.1;Name=WP_038272409.1;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159863.1;locus_tag=LPH58_RS00615;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_038272409.1;transl_table=11 NZ_CP087690.1 RefSeq gene 165137 165778 . - . ID=gene-LPH58_RS00620;Name=LPH58_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00620;old_locus_tag=LPH58_00620 NZ_CP087690.1 Protein Homology CDS 165137 165778 . - 0 ID=cds-WP_038272377.1;Parent=gene-LPH58_RS00620;Dbxref=Genbank:WP_038272377.1;Name=WP_038272377.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016207.2;locus_tag=LPH58_RS00620;product=FMN-binding negative transcriptional regulator;protein_id=WP_038272377.1;transl_table=11 NZ_CP087690.1 RefSeq gene 166160 166507 . - . ID=gene-LPH58_RS00625;Name=LPH58_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00625;old_locus_tag=LPH58_00625 NZ_CP087690.1 GeneMarkS-2+ CDS 166160 166507 . - 0 ID=cds-WP_038272374.1;Parent=gene-LPH58_RS00625;Dbxref=Genbank:WP_038272374.1;Name=WP_038272374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00625;product=hypothetical protein;protein_id=WP_038272374.1;transl_table=11 NZ_CP087690.1 RefSeq gene 166961 167818 . - . ID=gene-LPH58_RS00630;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LPH58_RS00630;old_locus_tag=LPH58_00630 NZ_CP087690.1 Protein Homology CDS 166961 167818 . - 0 ID=cds-WP_038272371.1;Parent=gene-LPH58_RS00630;Dbxref=Genbank:WP_038272371.1;Name=WP_038272371.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019305070.1;locus_tag=LPH58_RS00630;product=polyamine aminopropyltransferase;protein_id=WP_038272371.1;transl_table=11 NZ_CP087690.1 RefSeq gene 168037 169923 . + . ID=gene-LPH58_RS00635;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=LPH58_RS00635;old_locus_tag=LPH58_00635 NZ_CP087690.1 Protein Homology CDS 168037 169923 . + 0 ID=cds-WP_038272368.1;Parent=gene-LPH58_RS00635;Dbxref=Genbank:WP_038272368.1;Name=WP_038272368.1;Ontology_term=GO:0008295,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892689.1;locus_tag=LPH58_RS00635;product=arginine decarboxylase;protein_id=WP_038272368.1;transl_table=11 NZ_CP087690.1 RefSeq gene 170360 171115 . - . ID=gene-LPH58_RS00640;Name=LPH58_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00640;old_locus_tag=LPH58_00640 NZ_CP087690.1 Protein Homology CDS 170360 171115 . - 0 ID=cds-WP_038272367.1;Parent=gene-LPH58_RS00640;Dbxref=Genbank:WP_038272367.1;Name=WP_038272367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005995556.1;locus_tag=LPH58_RS00640;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038272367.1;transl_table=11 NZ_CP087690.1 RefSeq gene 171211 172008 . - . ID=gene-LPH58_RS00645;Name=LPH58_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00645;old_locus_tag=LPH58_00645 NZ_CP087690.1 Protein Homology CDS 171211 172008 . - 0 ID=cds-WP_038272365.1;Parent=gene-LPH58_RS00645;Dbxref=Genbank:WP_038272365.1;Name=WP_038272365.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085513.1;locus_tag=LPH58_RS00645;product=SPOR domain-containing protein;protein_id=WP_038272365.1;transl_table=11 NZ_CP087690.1 RefSeq gene 172048 173736 . - . ID=gene-LPH58_RS00650;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LPH58_RS00650;old_locus_tag=LPH58_00650 NZ_CP087690.1 Protein Homology CDS 172048 173736 . - 0 ID=cds-WP_038272360.1;Parent=gene-LPH58_RS00650;Dbxref=Genbank:WP_038272360.1;Name=WP_038272360.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300787.1;locus_tag=LPH58_RS00650;product=arginine--tRNA ligase;protein_id=WP_038272360.1;transl_table=11 NZ_CP087690.1 RefSeq gene 173863 174537 . - . ID=gene-LPH58_RS00655;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LPH58_RS00655;old_locus_tag=LPH58_00655 NZ_CP087690.1 Protein Homology CDS 173863 174537 . - 0 ID=cds-WP_038272357.1;Parent=gene-LPH58_RS00655;Dbxref=Genbank:WP_038272357.1;Name=WP_038272357.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097508.1;locus_tag=LPH58_RS00655;product=DNA repair protein RadC;protein_id=WP_038272357.1;transl_table=11 NZ_CP087690.1 RefSeq gene 174635 175864 . + . ID=gene-LPH58_RS00660;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LPH58_RS00660;old_locus_tag=LPH58_00660 NZ_CP087690.1 Protein Homology CDS 174635 175864 . + 0 ID=cds-WP_038272355.1;Parent=gene-LPH58_RS00660;Dbxref=Genbank:WP_038272355.1;Name=WP_038272355.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964144.1;locus_tag=LPH58_RS00660;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_038272355.1;transl_table=11 NZ_CP087690.1 RefSeq gene 175861 176328 . + . ID=gene-LPH58_RS00665;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LPH58_RS00665;old_locus_tag=LPH58_00665 NZ_CP087690.1 Protein Homology CDS 175861 176328 . + 0 ID=cds-WP_038272353.1;Parent=gene-LPH58_RS00665;Dbxref=Genbank:WP_038272353.1;Name=WP_038272353.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087579.1;locus_tag=LPH58_RS00665;product=dUTP diphosphatase;protein_id=WP_038272353.1;transl_table=11 NZ_CP087690.1 RefSeq gene 176342 178702 . + . ID=gene-LPH58_RS00670;Name=LPH58_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00670;old_locus_tag=LPH58_00670 NZ_CP087690.1 Protein Homology CDS 176342 178702 . + 0 ID=cds-WP_038272350.1;Parent=gene-LPH58_RS00670;Dbxref=Genbank:WP_038272350.1;Name=WP_038272350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085508.1;locus_tag=LPH58_RS00670;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_038272350.1;transl_table=11 NZ_CP087690.1 RefSeq gene 178709 179395 . - . ID=gene-LPH58_RS00675;Name=LPH58_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00675;old_locus_tag=LPH58_00675 NZ_CP087690.1 Protein Homology CDS 178709 179395 . - 0 ID=cds-WP_038272347.1;Parent=gene-LPH58_RS00675;Dbxref=Genbank:WP_038272347.1;Name=WP_038272347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085507.1;locus_tag=LPH58_RS00675;product=hypothetical protein;protein_id=WP_038272347.1;transl_table=11 NZ_CP087690.1 RefSeq gene 179419 180078 . - . ID=gene-LPH58_RS00680;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=LPH58_RS00680;old_locus_tag=LPH58_00680 NZ_CP087690.1 Protein Homology CDS 179419 180078 . - 0 ID=cds-WP_038272344.1;Parent=gene-LPH58_RS00680;Dbxref=Genbank:WP_038272344.1;Name=WP_038272344.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010374714.1;locus_tag=LPH58_RS00680;product=orotate phosphoribosyltransferase;protein_id=WP_038272344.1;transl_table=11 NZ_CP087690.1 RefSeq gene 180652 181461 . + . ID=gene-LPH58_RS00685;Name=LPH58_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00685;old_locus_tag=LPH58_00685 NZ_CP087690.1 Protein Homology CDS 180652 181461 . + 0 ID=cds-WP_038272342.1;Parent=gene-LPH58_RS00685;Dbxref=Genbank:WP_038272342.1;Name=WP_038272342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085505.1;locus_tag=LPH58_RS00685;product=DUF3289 family protein;protein_id=WP_038272342.1;transl_table=11 NZ_CP087690.1 RefSeq gene 181764 182579 . - . ID=gene-LPH58_RS00690;Name=LPH58_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00690;old_locus_tag=LPH58_00690 NZ_CP087690.1 Protein Homology CDS 181764 182579 . - 0 ID=cds-WP_038272339.1;Parent=gene-LPH58_RS00690;Dbxref=Genbank:WP_038272339.1;Name=WP_038272339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892701.1;locus_tag=LPH58_RS00690;product=C39 family peptidase;protein_id=WP_038272339.1;transl_table=11 NZ_CP087690.1 RefSeq gene 184068 184901 . + . ID=gene-LPH58_RS00695;Name=LPH58_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00695;old_locus_tag=LPH58_00695 NZ_CP087690.1 Protein Homology CDS 184068 184901 . + 0 ID=cds-WP_230428145.1;Parent=gene-LPH58_RS00695;Dbxref=Genbank:WP_230428145.1;Name=WP_230428145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085503.1;locus_tag=LPH58_RS00695;product=restriction endonuclease;protein_id=WP_230428145.1;transl_table=11 NZ_CP087690.1 RefSeq gene 184885 185154 . + . ID=gene-LPH58_RS00700;Name=LPH58_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00700;old_locus_tag=LPH58_00700 NZ_CP087690.1 Protein Homology CDS 184885 185154 . + 0 ID=cds-WP_038272337.1;Parent=gene-LPH58_RS00700;Dbxref=Genbank:WP_038272337.1;Name=WP_038272337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852674.1;locus_tag=LPH58_RS00700;product=hypothetical protein;protein_id=WP_038272337.1;transl_table=11 NZ_CP087690.1 RefSeq gene 185467 185829 . + . ID=gene-LPH58_RS00705;Name=LPH58_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00705;old_locus_tag=LPH58_00705 NZ_CP087690.1 GeneMarkS-2+ CDS 185467 185829 . + 0 ID=cds-WP_230428146.1;Parent=gene-LPH58_RS00705;Dbxref=Genbank:WP_230428146.1;Name=WP_230428146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00705;product=hypothetical protein;protein_id=WP_230428146.1;transl_table=11 NZ_CP087690.1 RefSeq gene 185965 186915 . + . ID=gene-LPH58_RS00710;Name=LPH58_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00710;old_locus_tag=LPH58_00710 NZ_CP087690.1 Protein Homology CDS 185965 186915 . + 0 ID=cds-WP_230433938.1;Parent=gene-LPH58_RS00710;Dbxref=Genbank:WP_230433938.1;Name=WP_230433938.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021594.2;locus_tag=LPH58_RS00710;product=DUF2326 domain-containing protein;protein_id=WP_230433938.1;transl_table=11 NZ_CP087690.1 RefSeq gene 188573 188908 . - . ID=gene-LPH58_RS00715;Name=LPH58_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00715;old_locus_tag=LPH58_00715 NZ_CP087690.1 GeneMarkS-2+ CDS 188573 188908 . - 0 ID=cds-WP_152536654.1;Parent=gene-LPH58_RS00715;Dbxref=Genbank:WP_152536654.1;Name=WP_152536654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00715;product=hypothetical protein;protein_id=WP_152536654.1;transl_table=11 NZ_CP087690.1 RefSeq gene 189534 190334 . + . ID=gene-LPH58_RS00720;Name=LPH58_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00720;old_locus_tag=LPH58_00720 NZ_CP087690.1 Protein Homology CDS 189534 190334 . + 0 ID=cds-WP_038272332.1;Parent=gene-LPH58_RS00720;Dbxref=Genbank:WP_038272332.1;Name=WP_038272332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852672.1;locus_tag=LPH58_RS00720;product=exodeoxyribonuclease III;protein_id=WP_038272332.1;transl_table=11 NZ_CP087690.1 RefSeq gene 190331 191860 . + . ID=gene-LPH58_RS00725;Name=LPH58_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00725;old_locus_tag=LPH58_00725 NZ_CP087690.1 Protein Homology CDS 190331 191860 . + 0 ID=cds-WP_038272331.1;Parent=gene-LPH58_RS00725;Dbxref=Genbank:WP_038272331.1;Name=WP_038272331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852671.1;locus_tag=LPH58_RS00725;product=MFS transporter;protein_id=WP_038272331.1;transl_table=11 NZ_CP087690.1 RefSeq gene 192013 193146 . - . ID=gene-LPH58_RS00730;Name=LPH58_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00730;old_locus_tag=LPH58_00730 NZ_CP087690.1 Protein Homology CDS 192013 193146 . - 0 ID=cds-WP_038272403.1;Parent=gene-LPH58_RS00730;Dbxref=Genbank:WP_038272403.1;Name=WP_038272403.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348848.1;locus_tag=LPH58_RS00730;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_038272403.1;transl_table=11 NZ_CP087690.1 RefSeq gene 193234 194646 . - . ID=gene-LPH58_RS00735;Name=LPH58_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00735;old_locus_tag=LPH58_00735 NZ_CP087690.1 Protein Homology CDS 193234 194646 . - 0 ID=cds-WP_038272330.1;Parent=gene-LPH58_RS00735;Dbxref=Genbank:WP_038272330.1;Name=WP_038272330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337570.1;locus_tag=LPH58_RS00735;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_038272330.1;transl_table=11 NZ_CP087690.1 RefSeq gene 194823 196043 . + . ID=gene-LPH58_RS00740;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LPH58_RS00740;old_locus_tag=LPH58_00740 NZ_CP087690.1 Protein Homology CDS 194823 196043 . + 0 ID=cds-WP_038272327.1;Parent=gene-LPH58_RS00740;Dbxref=Genbank:WP_038272327.1;Name=WP_038272327.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087787.1;locus_tag=LPH58_RS00740;product=tyrosine--tRNA ligase;protein_id=WP_038272327.1;transl_table=11 NZ_CP087690.1 RefSeq gene 196823 198367 . + . ID=gene-LPH58_RS00745;Name=LPH58_RS00745;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH58_RS00745;old_locus_tag=LPH58_00745 NZ_CP087690.1 cmsearch rRNA 196823 198367 . + . ID=rna-LPH58_RS00745;Parent=gene-LPH58_RS00745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00745;product=16S ribosomal RNA NZ_CP087690.1 cmsearch exon 196823 198367 . + . ID=exon-LPH58_RS00745-1;Parent=rna-LPH58_RS00745;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00745;product=16S ribosomal RNA NZ_CP087690.1 RefSeq gene 198462 198537 . + . ID=gene-LPH58_RS00750;Name=LPH58_RS00750;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00750;old_locus_tag=LPH58_00750 NZ_CP087690.1 tRNAscan-SE tRNA 198462 198537 . + . ID=rna-LPH58_RS00750;Parent=gene-LPH58_RS00750;anticodon=(pos:198495..198497);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00750;product=tRNA-Ala NZ_CP087690.1 tRNAscan-SE exon 198462 198537 . + . ID=exon-LPH58_RS00750-1;Parent=rna-LPH58_RS00750;anticodon=(pos:198495..198497);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00750;product=tRNA-Ala NZ_CP087690.1 RefSeq gene 198549 198625 . + . ID=gene-LPH58_RS00755;Name=LPH58_RS00755;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00755;old_locus_tag=LPH58_00755 NZ_CP087690.1 tRNAscan-SE tRNA 198549 198625 . + . ID=rna-LPH58_RS00755;Parent=gene-LPH58_RS00755;anticodon=(pos:198583..198585);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00755;product=tRNA-Ile NZ_CP087690.1 tRNAscan-SE exon 198549 198625 . + . ID=exon-LPH58_RS00755-1;Parent=rna-LPH58_RS00755;anticodon=(pos:198583..198585);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00755;product=tRNA-Ile NZ_CP087690.1 RefSeq gene 198844 201722 . + . ID=gene-LPH58_RS00760;Name=LPH58_RS00760;gbkey=Gene;gene_biotype=rRNA;locus_tag=LPH58_RS00760;old_locus_tag=LPH58_00760 NZ_CP087690.1 cmsearch rRNA 198844 201722 . + . ID=rna-LPH58_RS00760;Parent=gene-LPH58_RS00760;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00760;product=23S ribosomal RNA NZ_CP087690.1 cmsearch exon 198844 201722 . + . ID=exon-LPH58_RS00760-1;Parent=rna-LPH58_RS00760;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00760;product=23S ribosomal RNA NZ_CP087690.1 RefSeq gene 201853 201966 . + . ID=gene-LPH58_RS00765;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LPH58_RS00765;old_locus_tag=LPH58_00765 NZ_CP087690.1 cmsearch rRNA 201853 201966 . + . ID=rna-LPH58_RS00765;Parent=gene-LPH58_RS00765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00765;product=5S ribosomal RNA NZ_CP087690.1 cmsearch exon 201853 201966 . + . ID=exon-LPH58_RS00765-1;Parent=rna-LPH58_RS00765;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS00765;product=5S ribosomal RNA NZ_CP087690.1 RefSeq gene 202117 202932 . + . ID=gene-LPH58_RS00770;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LPH58_RS00770;old_locus_tag=LPH58_00770 NZ_CP087690.1 Protein Homology CDS 202117 202932 . + 0 ID=cds-WP_038273054.1-2;Parent=gene-LPH58_RS00770;Dbxref=Genbank:WP_038273054.1;Name=WP_038273054.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085054.1;locus_tag=LPH58_RS00770;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_038273054.1;transl_table=11 NZ_CP087690.1 RefSeq gene 203035 203799 . - . ID=gene-LPH58_RS00775;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=protein_coding;locus_tag=LPH58_RS00775;old_locus_tag=LPH58_00775 NZ_CP087690.1 Protein Homology CDS 203035 203799 . - 0 ID=cds-WP_038273056.1-2;Parent=gene-LPH58_RS00775;Dbxref=Genbank:WP_038273056.1;Name=WP_038273056.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085053.1;locus_tag=LPH58_RS00775;product=cytochrome c biogenesis protein CcsA;protein_id=WP_038273056.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 204366 206243 . + . ID=gene-LPH58_RS00780;Name=LPH58_RS00780;end_range=206243,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS00780;old_locus_tag=LPH58_00780;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 204366 206243 . + 0 ID=cds-LPH58_RS00780;Parent=gene-LPH58_RS00780;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=206243,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087191.1;locus_tag=LPH58_RS00780;partial=true;product=DUF885 family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 207307 207531 . - . ID=gene-LPH58_RS00785;Name=LPH58_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00785;old_locus_tag=LPH58_00785 NZ_CP087690.1 GeneMarkS-2+ CDS 207307 207531 . - 0 ID=cds-WP_162814079.1;Parent=gene-LPH58_RS00785;Dbxref=Genbank:WP_162814079.1;Name=WP_162814079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00785;product=hypothetical protein;protein_id=WP_162814079.1;transl_table=11 NZ_CP087690.1 RefSeq gene 207859 208026 . + . ID=gene-LPH58_RS00790;Name=LPH58_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00790;old_locus_tag=LPH58_00790 NZ_CP087690.1 GeneMarkS-2+ CDS 207859 208026 . + 0 ID=cds-WP_160165163.1;Parent=gene-LPH58_RS00790;Dbxref=Genbank:WP_160165163.1;Name=WP_160165163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00790;product=hypothetical protein;protein_id=WP_160165163.1;transl_table=11 NZ_CP087690.1 RefSeq gene 209903 210643 . - . ID=gene-LPH58_RS00795;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LPH58_RS00795;old_locus_tag=LPH58_00795 NZ_CP087690.1 Protein Homology CDS 209903 210643 . - 0 ID=cds-WP_038271021.1;Parent=gene-LPH58_RS00795;Dbxref=Genbank:WP_038271021.1;Name=WP_038271021.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017909512.1;locus_tag=LPH58_RS00795;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_038271021.1;transl_table=11 NZ_CP087690.1 RefSeq gene 212543 214147 . + . ID=gene-LPH58_RS00800;Name=LPH58_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00800;old_locus_tag=LPH58_00800 NZ_CP087690.1 Protein Homology CDS 212543 214147 . + 0 ID=cds-WP_038271116.1;Parent=gene-LPH58_RS00800;Dbxref=Genbank:WP_038271116.1;Name=WP_038271116.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085050.1;locus_tag=LPH58_RS00800;product=peptide chain release factor 3;protein_id=WP_038271116.1;transl_table=11 NZ_CP087690.1 RefSeq gene 214228 214872 . + . ID=gene-LPH58_RS00805;Name=LPH58_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00805;old_locus_tag=LPH58_00805 NZ_CP087690.1 Protein Homology CDS 214228 214872 . + 0 ID=cds-WP_038271024.1;Parent=gene-LPH58_RS00805;Dbxref=Genbank:WP_038271024.1;Name=WP_038271024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301897.1;locus_tag=LPH58_RS00805;product=hemolysin III family protein;protein_id=WP_038271024.1;transl_table=11 NZ_CP087690.1 RefSeq gene 215591 216604 . - . ID=gene-LPH58_RS00810;Name=LPH58_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00810;old_locus_tag=LPH58_00810 NZ_CP087690.1 Protein Homology CDS 215591 216604 . - 0 ID=cds-WP_038271025.1;Parent=gene-LPH58_RS00810;Dbxref=Genbank:WP_038271025.1;Name=WP_038271025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097517.1;locus_tag=LPH58_RS00810;product=glycosyltransferase family 2 protein;protein_id=WP_038271025.1;transl_table=11 NZ_CP087690.1 RefSeq gene 217783 218565 . - . ID=gene-LPH58_RS00815;Name=LPH58_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00815;old_locus_tag=LPH58_00815 NZ_CP087690.1 Protein Homology CDS 217783 218565 . - 0 ID=cds-WP_038271027.1;Parent=gene-LPH58_RS00815;Dbxref=Genbank:WP_038271027.1;Name=WP_038271027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087182.1;locus_tag=LPH58_RS00815;product=TatD family hydrolase;protein_id=WP_038271027.1;transl_table=11 NZ_CP087690.1 RefSeq gene 218903 219673 . + . ID=gene-LPH58_RS00820;Name=LPH58_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00820;old_locus_tag=LPH58_00820 NZ_CP087690.1 Protein Homology CDS 218903 219673 . + 0 ID=cds-WP_038271029.1;Parent=gene-LPH58_RS00820;Dbxref=Genbank:WP_038271029.1;Name=WP_038271029.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087181.1;locus_tag=LPH58_RS00820;product=glycine zipper 2TM domain-containing protein;protein_id=WP_038271029.1;transl_table=11 NZ_CP087690.1 RefSeq gene 221149 221541 . - . ID=gene-LPH58_RS00825;Name=LPH58_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00825;old_locus_tag=LPH58_00825 NZ_CP087690.1 Protein Homology CDS 221149 221541 . - 0 ID=cds-WP_038271030.1;Parent=gene-LPH58_RS00825;Dbxref=Genbank:WP_038271030.1;Name=WP_038271030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005933739.1;locus_tag=LPH58_RS00825;product=hypothetical protein;protein_id=WP_038271030.1;transl_table=11 NZ_CP087690.1 RefSeq gene 222896 223291 . - . ID=gene-LPH58_RS00830;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LPH58_RS00830;old_locus_tag=LPH58_00830 NZ_CP087690.1 Protein Homology CDS 222896 223291 . - 0 ID=cds-WP_038271031.1;Parent=gene-LPH58_RS00830;Dbxref=Genbank:WP_038271031.1;Name=WP_038271031.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087179.1;locus_tag=LPH58_RS00830;product=glycine cleavage system protein GcvH;protein_id=WP_038271031.1;transl_table=11 NZ_CP087690.1 RefSeq gene 224058 225164 . - . ID=gene-LPH58_RS00835;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LPH58_RS00835;old_locus_tag=LPH58_00835 NZ_CP087690.1 Protein Homology CDS 224058 225164 . - 0 ID=cds-WP_038271032.1;Parent=gene-LPH58_RS00835;Dbxref=Genbank:WP_038271032.1;Name=WP_038271032.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851419.1;locus_tag=LPH58_RS00835;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_038271032.1;transl_table=11 NZ_CP087690.1 RefSeq gene 225317 225754 . - . ID=gene-LPH58_RS00840;Name=LPH58_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00840;old_locus_tag=LPH58_00840 NZ_CP087690.1 Protein Homology CDS 225317 225754 . - 0 ID=cds-WP_038271033.1;Parent=gene-LPH58_RS00840;Dbxref=Genbank:WP_038271033.1;Name=WP_038271033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343187.1;locus_tag=LPH58_RS00840;product=NfeD family protein;protein_id=WP_038271033.1;transl_table=11 NZ_CP087690.1 RefSeq gene 225758 226714 . - . ID=gene-LPH58_RS00845;Name=LPH58_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00845;old_locus_tag=LPH58_00845 NZ_CP087690.1 Protein Homology CDS 225758 226714 . - 0 ID=cds-WP_038271034.1;Parent=gene-LPH58_RS00845;Dbxref=Genbank:WP_038271034.1;Name=WP_038271034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087172.1;locus_tag=LPH58_RS00845;product=SPFH/Band 7/PHB domain protein;protein_id=WP_038271034.1;transl_table=11 NZ_CP087690.1 RefSeq gene 227397 228230 . - . ID=gene-LPH58_RS00850;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=LPH58_RS00850;old_locus_tag=LPH58_00850 NZ_CP087690.1 Protein Homology CDS 227397 228230 . - 0 ID=cds-WP_038271035.1;Parent=gene-LPH58_RS00850;Dbxref=Genbank:WP_038271035.1;Name=WP_038271035.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087170.1;locus_tag=LPH58_RS00850;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_038271035.1;transl_table=11 NZ_CP087690.1 RefSeq gene 228263 229063 . - . ID=gene-LPH58_RS00855;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=LPH58_RS00855;old_locus_tag=LPH58_00855 NZ_CP087690.1 Protein Homology CDS 228263 229063 . - 0 ID=cds-WP_038271037.1;Parent=gene-LPH58_RS00855;Dbxref=Genbank:WP_038271037.1;Name=WP_038271037.1;Ontology_term=GO:0006790,GO:0008441;gbkey=CDS;gene=cysQ;go_function=3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811298.1;locus_tag=LPH58_RS00855;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_038271037.1;transl_table=11 NZ_CP087690.1 RefSeq gene 229060 229608 . - . ID=gene-LPH58_RS00860;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=LPH58_RS00860;old_locus_tag=LPH58_00860 NZ_CP087690.1 Protein Homology CDS 229060 229608 . - 0 ID=cds-WP_038271039.1;Parent=gene-LPH58_RS00860;Dbxref=Genbank:WP_038271039.1;Name=WP_038271039.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382420.1;locus_tag=LPH58_RS00860;product=ADP compounds hydrolase NudE;protein_id=WP_038271039.1;transl_table=11 NZ_CP087690.1 RefSeq gene 229677 231101 . + . ID=gene-LPH58_RS00865;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LPH58_RS00865;old_locus_tag=LPH58_00865 NZ_CP087690.1 Protein Homology CDS 229677 231101 . + 0 ID=cds-WP_038271040.1;Parent=gene-LPH58_RS00865;Dbxref=Genbank:WP_038271040.1;Name=WP_038271040.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382421.1;locus_tag=LPH58_RS00865;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_038271040.1;transl_table=11 NZ_CP087690.1 RefSeq gene 231092 231826 . + . ID=gene-LPH58_RS00870;Name=LPH58_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00870;old_locus_tag=LPH58_00870 NZ_CP087690.1 Protein Homology CDS 231092 231826 . + 0 ID=cds-WP_038271042.1;Parent=gene-LPH58_RS00870;Dbxref=Genbank:WP_038271042.1;Name=WP_038271042.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931477.1;locus_tag=LPH58_RS00870;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_038271042.1;transl_table=11 NZ_CP087690.1 RefSeq gene 232836 232985 . + . ID=gene-LPH58_RS00875;Name=LPH58_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00875;old_locus_tag=LPH58_00875 NZ_CP087690.1 GeneMarkS-2+ CDS 232836 232985 . + 0 ID=cds-WP_160165164.1;Parent=gene-LPH58_RS00875;Dbxref=Genbank:WP_160165164.1;Name=WP_160165164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00875;product=hypothetical protein;protein_id=WP_160165164.1;transl_table=11 NZ_CP087690.1 RefSeq gene 234036 235376 . + . ID=gene-LPH58_RS00880;Name=LPH58_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00880;old_locus_tag=LPH58_00880 NZ_CP087690.1 Protein Homology CDS 234036 235376 . + 0 ID=cds-WP_038271043.1;Parent=gene-LPH58_RS00880;Dbxref=Genbank:WP_038271043.1;Name=WP_038271043.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572992.1;locus_tag=LPH58_RS00880;product=DEAD/DEAH box helicase;protein_id=WP_038271043.1;transl_table=11 NZ_CP087690.1 RefSeq gene 235451 235804 . + . ID=gene-LPH58_RS00885;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LPH58_RS00885;old_locus_tag=LPH58_00885 NZ_CP087690.1 Protein Homology CDS 235451 235804 . + 0 ID=cds-WP_038271045.1;Parent=gene-LPH58_RS00885;Dbxref=Genbank:WP_038271045.1;Name=WP_038271045.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572991.1;locus_tag=LPH58_RS00885;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_038271045.1;transl_table=11 NZ_CP087690.1 RefSeq gene 237781 238302 . - . ID=gene-LPH58_RS00890;Name=LPH58_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00890;old_locus_tag=LPH58_00890 NZ_CP087690.1 Protein Homology CDS 237781 238302 . - 0 ID=cds-WP_038271117.1;Parent=gene-LPH58_RS00890;Dbxref=Genbank:WP_038271117.1;Name=WP_038271117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572990.1;locus_tag=LPH58_RS00890;product=DUF2059 domain-containing protein;protein_id=WP_038271117.1;transl_table=11 NZ_CP087690.1 RefSeq gene 238721 239350 . + . ID=gene-LPH58_RS00895;Name=LPH58_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00895;old_locus_tag=LPH58_00895 NZ_CP087690.1 Protein Homology CDS 238721 239350 . + 0 ID=cds-WP_038271049.1;Parent=gene-LPH58_RS00895;Dbxref=Genbank:WP_038271049.1;Name=WP_038271049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035483.1;locus_tag=LPH58_RS00895;product=lysophospholipid acyltransferase family protein;protein_id=WP_038271049.1;transl_table=11 NZ_CP087690.1 RefSeq gene 240471 241160 . - . ID=gene-LPH58_RS00900;Name=LPH58_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00900;old_locus_tag=LPH58_00900 NZ_CP087690.1 Protein Homology CDS 240471 241160 . - 0 ID=cds-WP_038271051.1;Parent=gene-LPH58_RS00900;Dbxref=Genbank:WP_038271051.1;Name=WP_038271051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467120.1;locus_tag=LPH58_RS00900;product=DUF502 domain-containing protein;protein_id=WP_038271051.1;transl_table=11 NZ_CP087690.1 RefSeq gene 241968 242558 . - . ID=gene-LPH58_RS00905;Name=LPH58_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00905;old_locus_tag=LPH58_00905 NZ_CP087690.1 Protein Homology CDS 241968 242558 . - 0 ID=cds-WP_038271053.1;Parent=gene-LPH58_RS00905;Dbxref=Genbank:WP_038271053.1;Name=WP_038271053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851431.1;locus_tag=LPH58_RS00905;product=class I SAM-dependent methyltransferase;protein_id=WP_038271053.1;transl_table=11 NZ_CP087690.1 RefSeq gene 242632 243084 . + . ID=gene-LPH58_RS00910;Name=LPH58_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00910;old_locus_tag=LPH58_00910 NZ_CP087690.1 Protein Homology CDS 242632 243084 . + 0 ID=cds-WP_038271055.1;Parent=gene-LPH58_RS00910;Dbxref=Genbank:WP_038271055.1;Name=WP_038271055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902407.1;locus_tag=LPH58_RS00910;product=CopD family protein;protein_id=WP_038271055.1;transl_table=11 NZ_CP087690.1 RefSeq gene 243251 244210 . - . ID=gene-LPH58_RS00915;Name=LPH58_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00915;old_locus_tag=LPH58_00915 NZ_CP087690.1 Protein Homology CDS 243251 244210 . - 0 ID=cds-WP_038271056.1;Parent=gene-LPH58_RS00915;Dbxref=Genbank:WP_038271056.1;Name=WP_038271056.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008578271.1;locus_tag=LPH58_RS00915;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_038271056.1;transl_table=11 NZ_CP087690.1 RefSeq gene 244305 247886 . - . ID=gene-LPH58_RS00920;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LPH58_RS00920;old_locus_tag=LPH58_00920 NZ_CP087690.1 Protein Homology CDS 244305 247886 . - 0 ID=cds-WP_038271057.1;Parent=gene-LPH58_RS00920;Dbxref=Genbank:WP_038271057.1;Name=WP_038271057.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572983.1;locus_tag=LPH58_RS00920;product=DNA polymerase III subunit alpha;protein_id=WP_038271057.1;transl_table=11 NZ_CP087690.1 RefSeq gene 248385 249311 . - . ID=gene-LPH58_RS00925;Name=LPH58_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00925;old_locus_tag=LPH58_00925 NZ_CP087690.1 Protein Homology CDS 248385 249311 . - 0 ID=cds-WP_038271058.1;Parent=gene-LPH58_RS00925;Dbxref=Genbank:WP_038271058.1;Name=WP_038271058.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448471.1;locus_tag=LPH58_RS00925;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_038271058.1;transl_table=11 NZ_CP087690.1 RefSeq gene 249804 250133 . + . ID=gene-LPH58_RS00930;Name=LPH58_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00930;old_locus_tag=LPH58_00930 NZ_CP087690.1 Protein Homology CDS 249804 250133 . + 0 ID=cds-WP_038271059.1;Parent=gene-LPH58_RS00930;Dbxref=Genbank:WP_038271059.1;Name=WP_038271059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157937.1;locus_tag=LPH58_RS00930;product=DnaJ domain-containing protein;protein_id=WP_038271059.1;transl_table=11 NZ_CP087690.1 RefSeq gene 250183 250854 . + . ID=gene-LPH58_RS00935;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LPH58_RS00935;old_locus_tag=LPH58_00935 NZ_CP087690.1 Protein Homology CDS 250183 250854 . + 0 ID=cds-WP_038271118.1;Parent=gene-LPH58_RS00935;Dbxref=Genbank:WP_038271118.1;Name=WP_038271118.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010379428.1;locus_tag=LPH58_RS00935;product=ribulose-phosphate 3-epimerase;protein_id=WP_038271118.1;transl_table=11 NZ_CP087690.1 RefSeq gene 251967 252380 . - . ID=gene-LPH58_RS00940;Name=LPH58_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00940;old_locus_tag=LPH58_00940 NZ_CP087690.1 GeneMarkS-2+ CDS 251967 252380 . - 0 ID=cds-WP_160165165.1;Parent=gene-LPH58_RS00940;Dbxref=Genbank:WP_160165165.1;Name=WP_160165165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS00940;product=hypothetical protein;protein_id=WP_160165165.1;transl_table=11 NZ_CP087690.1 RefSeq gene 253526 255001 . + . ID=gene-LPH58_RS00945;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LPH58_RS00945;old_locus_tag=LPH58_00945 NZ_CP087690.1 Protein Homology CDS 253526 255001 . + 0 ID=cds-WP_038271061.1;Parent=gene-LPH58_RS00945;Dbxref=Genbank:WP_038271061.1;Name=WP_038271061.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575582.1;locus_tag=LPH58_RS00945;product=anthranilate synthase component I;protein_id=WP_038271061.1;transl_table=11 NZ_CP087690.1 RefSeq gene 255182 255766 . + . ID=gene-LPH58_RS00950;Name=LPH58_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00950;old_locus_tag=LPH58_00950 NZ_CP087690.1 Protein Homology CDS 255182 255766 . + 0 ID=cds-WP_038271062.1;Parent=gene-LPH58_RS00950;Dbxref=Genbank:WP_038271062.1;Name=WP_038271062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892752.1;locus_tag=LPH58_RS00950;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_038271062.1;transl_table=11 NZ_CP087690.1 RefSeq gene 255833 256867 . + . ID=gene-LPH58_RS00955;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LPH58_RS00955;old_locus_tag=LPH58_00955 NZ_CP087690.1 Protein Homology CDS 255833 256867 . + 0 ID=cds-WP_038271063.1;Parent=gene-LPH58_RS00955;Dbxref=Genbank:WP_038271063.1;Name=WP_038271063.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572976.1;locus_tag=LPH58_RS00955;product=anthranilate phosphoribosyltransferase;protein_id=WP_038271063.1;transl_table=11 NZ_CP087690.1 RefSeq gene 256944 257738 . + . ID=gene-LPH58_RS00960;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LPH58_RS00960;old_locus_tag=LPH58_00960 NZ_CP087690.1 Protein Homology CDS 256944 257738 . + 0 ID=cds-WP_038271064.1;Parent=gene-LPH58_RS00960;Dbxref=Genbank:WP_038271064.1;Name=WP_038271064.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470238.1;locus_tag=LPH58_RS00960;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_038271064.1;transl_table=11 NZ_CP087690.1 RefSeq gene 257735 258451 . + . ID=gene-LPH58_RS00965;Name=LPH58_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00965;old_locus_tag=LPH58_00965 NZ_CP087690.1 Protein Homology CDS 257735 258451 . + 0 ID=cds-WP_038271065.1;Parent=gene-LPH58_RS00965;Dbxref=Genbank:WP_038271065.1;Name=WP_038271065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097528.1;locus_tag=LPH58_RS00965;product=haloacid dehalogenase-like hydrolase;protein_id=WP_038271065.1;transl_table=11 NZ_CP087690.1 RefSeq gene 259494 260000 . + . ID=gene-LPH58_RS00970;Name=LPH58_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00970;old_locus_tag=LPH58_00970 NZ_CP087690.1 Protein Homology CDS 259494 260000 . + 0 ID=cds-WP_038271119.1;Parent=gene-LPH58_RS00970;Dbxref=Genbank:WP_038271119.1;Name=WP_038271119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852326.1;locus_tag=LPH58_RS00970;product=MarR family transcriptional regulator;protein_id=WP_038271119.1;transl_table=11 NZ_CP087690.1 RefSeq gene 260732 261745 . - . ID=gene-LPH58_RS00975;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LPH58_RS00975;old_locus_tag=LPH58_00975 NZ_CP087690.1 Protein Homology CDS 260732 261745 . - 0 ID=cds-WP_038271066.1;Parent=gene-LPH58_RS00975;Dbxref=Genbank:WP_038271066.1;Name=WP_038271066.1;Ontology_term=GO:0015415,GO:0042301,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=pstS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910159.1;locus_tag=LPH58_RS00975;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_038271066.1;transl_table=11 NZ_CP087690.1 RefSeq gene 261983 263215 . + . ID=gene-LPH58_RS00980;Name=LPH58_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00980;old_locus_tag=LPH58_00980 NZ_CP087690.1 Protein Homology CDS 261983 263215 . + 0 ID=cds-WP_038271067.1;Parent=gene-LPH58_RS00980;Dbxref=Genbank:WP_038271067.1;Name=WP_038271067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014646541.1;locus_tag=LPH58_RS00980;product=porin;protein_id=WP_038271067.1;transl_table=11 NZ_CP087690.1 RefSeq gene 264315 264390 . - . ID=gene-LPH58_RS00985;Name=LPH58_RS00985;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS00985;old_locus_tag=LPH58_00985 NZ_CP087690.1 tRNAscan-SE tRNA 264315 264390 . - . ID=rna-LPH58_RS00985;Parent=gene-LPH58_RS00985;anticodon=(pos:complement(264355..264357));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00985;product=tRNA-Ala NZ_CP087690.1 tRNAscan-SE exon 264315 264390 . - . ID=exon-LPH58_RS00985-1;Parent=rna-LPH58_RS00985;anticodon=(pos:complement(264355..264357));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS00985;product=tRNA-Ala NZ_CP087690.1 RefSeq gene 265645 265908 . + . ID=gene-LPH58_RS00990;Name=LPH58_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00990;old_locus_tag=LPH58_00990 NZ_CP087690.1 Protein Homology CDS 265645 265908 . + 0 ID=cds-WP_081755428.1;Parent=gene-LPH58_RS00990;Dbxref=Genbank:WP_081755428.1;Name=WP_081755428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382425.1;locus_tag=LPH58_RS00990;product=hypothetical protein;protein_id=WP_081755428.1;transl_table=11 NZ_CP087690.1 RefSeq gene 265905 267107 . + . ID=gene-LPH58_RS00995;Name=LPH58_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS00995;old_locus_tag=LPH58_00995 NZ_CP087690.1 Protein Homology CDS 265905 267107 . + 0 ID=cds-WP_038271069.1;Parent=gene-LPH58_RS00995;Dbxref=Genbank:WP_038271069.1;Name=WP_038271069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086294.1;locus_tag=LPH58_RS00995;product=Xaa-Pro peptidase family protein;protein_id=WP_038271069.1;transl_table=11 NZ_CP087690.1 RefSeq gene 267295 269118 . + . ID=gene-LPH58_RS01000;Name=LPH58_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01000;old_locus_tag=LPH58_01000 NZ_CP087690.1 Protein Homology CDS 267295 269118 . + 0 ID=cds-WP_038271070.1;Parent=gene-LPH58_RS01000;Dbxref=Genbank:WP_038271070.1;Name=WP_038271070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920338.1;locus_tag=LPH58_RS01000;product=DUF885 family protein;protein_id=WP_038271070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 269115 269246 . + . ID=gene-LPH58_RS11895;Name=LPH58_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11895 NZ_CP087690.1 GeneMarkS-2+ CDS 269115 269246 . + 0 ID=cds-WP_267903165.1;Parent=gene-LPH58_RS11895;Dbxref=Genbank:WP_267903165.1;Name=WP_267903165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11895;product=hypothetical protein;protein_id=WP_267903165.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 269307 270132 . + . ID=gene-LPH58_RS01005;Name=LPH58_RS01005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01005;old_locus_tag=LPH58_01005;pseudo=true NZ_CP087690.1 Protein Homology CDS 269307 270132 . + 0 ID=cds-LPH58_RS01005;Parent=gene-LPH58_RS01005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892763.1;locus_tag=LPH58_RS01005;product=DUF885 family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 270581 271723 . + . ID=gene-LPH58_RS01010;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LPH58_RS01010;old_locus_tag=LPH58_01010 NZ_CP087690.1 Protein Homology CDS 270581 271723 . + 0 ID=cds-WP_038271073.1;Parent=gene-LPH58_RS01010;Dbxref=Genbank:WP_038271073.1;Name=WP_038271073.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086289.1;locus_tag=LPH58_RS01010;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_038271073.1;transl_table=11 NZ_CP087690.1 RefSeq gene 271846 272196 . + . ID=gene-LPH58_RS01015;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LPH58_RS01015;old_locus_tag=LPH58_01015 NZ_CP087690.1 Protein Homology CDS 271846 272196 . + 0 ID=cds-WP_038271074.1;Parent=gene-LPH58_RS01015;Dbxref=Genbank:WP_038271074.1;Name=WP_038271074.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014036867.1;locus_tag=LPH58_RS01015;product=preprotein translocase subunit YajC;protein_id=WP_038271074.1;transl_table=11 NZ_CP087690.1 RefSeq gene 272263 274107 . + . ID=gene-LPH58_RS01020;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LPH58_RS01020;old_locus_tag=LPH58_01020 NZ_CP087690.1 Protein Homology CDS 272263 274107 . + 0 ID=cds-WP_038271120.1;Parent=gene-LPH58_RS01020;Dbxref=Genbank:WP_038271120.1;Name=WP_038271120.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917104.1;locus_tag=LPH58_RS01020;product=protein translocase subunit SecD;protein_id=WP_038271120.1;transl_table=11 NZ_CP087690.1 RefSeq gene 274127 275092 . + . ID=gene-LPH58_RS01025;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LPH58_RS01025;old_locus_tag=LPH58_01025 NZ_CP087690.1 Protein Homology CDS 274127 275092 . + 0 ID=cds-WP_038271076.1;Parent=gene-LPH58_RS01025;Dbxref=Genbank:WP_038271076.1;Name=WP_038271076.1;Ontology_term=GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438079.1;locus_tag=LPH58_RS01025;product=protein translocase subunit SecF;protein_id=WP_038271076.1;transl_table=11 NZ_CP087690.1 RefSeq gene 275253 275327 . - . ID=gene-LPH58_RS01030;Name=LPH58_RS01030;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS01030;old_locus_tag=LPH58_01030 NZ_CP087690.1 tRNAscan-SE tRNA 275253 275327 . - . ID=rna-LPH58_RS01030;Parent=gene-LPH58_RS01030;anticodon=(pos:complement(275292..275294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01030;product=tRNA-Glu NZ_CP087690.1 tRNAscan-SE exon 275253 275327 . - . ID=exon-LPH58_RS01030-1;Parent=rna-LPH58_RS01030;anticodon=(pos:complement(275292..275294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01030;product=tRNA-Glu NZ_CP087690.1 RefSeq gene 275409 276677 . + . ID=gene-LPH58_RS01035;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LPH58_RS01035;old_locus_tag=LPH58_01035 NZ_CP087690.1 Protein Homology CDS 275409 276677 . + 0 ID=cds-WP_081755429.1;Parent=gene-LPH58_RS01035;Dbxref=Genbank:WP_081755429.1;Name=WP_081755429.1;Ontology_term=GO:0006378,GO:0003723,GO:0004652;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,polynucleotide adenylyltransferase activity|0004652||IEA;go_process=mRNA polyadenylation|0006378||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303731.1;locus_tag=LPH58_RS01035;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_081755429.1;transl_table=11 NZ_CP087690.1 RefSeq gene 276698 277189 . + . ID=gene-LPH58_RS01040;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LPH58_RS01040;old_locus_tag=LPH58_01040 NZ_CP087690.1 Protein Homology CDS 276698 277189 . + 0 ID=cds-WP_038271121.1;Parent=gene-LPH58_RS01040;Dbxref=Genbank:WP_038271121.1;Name=WP_038271121.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097533.1;locus_tag=LPH58_RS01040;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_038271121.1;transl_table=11 NZ_CP087690.1 RefSeq gene 277222 278040 . + . ID=gene-LPH58_RS01045;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LPH58_RS01045;old_locus_tag=LPH58_01045 NZ_CP087690.1 Protein Homology CDS 277222 278040 . + 0 ID=cds-WP_038271078.1;Parent=gene-LPH58_RS01045;Dbxref=Genbank:WP_038271078.1;Name=WP_038271078.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408567.1;locus_tag=LPH58_RS01045;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_038271078.1;transl_table=11 NZ_CP087690.1 RefSeq gene 278037 278882 . + . ID=gene-LPH58_RS01050;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LPH58_RS01050;old_locus_tag=LPH58_01050 NZ_CP087690.1 Protein Homology CDS 278037 278882 . + 0 ID=cds-WP_038271079.1;Parent=gene-LPH58_RS01050;Dbxref=Genbank:WP_038271079.1;Name=WP_038271079.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011259031.1;locus_tag=LPH58_RS01050;product=pantoate--beta-alanine ligase;protein_id=WP_038271079.1;transl_table=11 NZ_CP087690.1 RefSeq gene 278967 279347 . + . ID=gene-LPH58_RS01055;Name=LPH58_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01055;old_locus_tag=LPH58_01055 NZ_CP087690.1 Protein Homology CDS 278967 279347 . + 0 ID=cds-WP_038271081.1;Parent=gene-LPH58_RS01055;Dbxref=Genbank:WP_038271081.1;Name=WP_038271081.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036943.1;locus_tag=LPH58_RS01055;product=aspartate 1-decarboxylase;protein_id=WP_038271081.1;transl_table=11 NZ_CP087690.1 RefSeq gene 279351 280859 . + . ID=gene-LPH58_RS01060;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LPH58_RS01060;old_locus_tag=LPH58_01060 NZ_CP087690.1 Protein Homology CDS 279351 280859 . + 0 ID=cds-WP_038271082.1;Parent=gene-LPH58_RS01060;Dbxref=Genbank:WP_038271082.1;Name=WP_038271082.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852608.1;locus_tag=LPH58_RS01060;product=glucose-6-phosphate isomerase;protein_id=WP_038271082.1;transl_table=11 NZ_CP087690.1 RefSeq gene 282752 282825 . + . ID=gene-LPH58_RS01065;Name=LPH58_RS01065;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS01065;old_locus_tag=LPH58_01065 NZ_CP087690.1 tRNAscan-SE tRNA 282752 282825 . + . ID=rna-LPH58_RS01065;Parent=gene-LPH58_RS01065;anticodon=(pos:282786..282788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01065;product=tRNA-Met NZ_CP087690.1 tRNAscan-SE exon 282752 282825 . + . ID=exon-LPH58_RS01065-1;Parent=rna-LPH58_RS01065;anticodon=(pos:282786..282788);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01065;product=tRNA-Met NZ_CP087690.1 RefSeq gene 284358 284948 . + . ID=gene-LPH58_RS01070;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LPH58_RS01070;old_locus_tag=LPH58_01070 NZ_CP087690.1 Protein Homology CDS 284358 284948 . + 0 ID=cds-WP_038271122.1;Parent=gene-LPH58_RS01070;Dbxref=Genbank:WP_038271122.1;Name=WP_038271122.1;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300413.1;locus_tag=LPH58_RS01070;product=ribosome maturation factor RimP;protein_id=WP_038271122.1;transl_table=11 NZ_CP087690.1 RefSeq gene 284954 286465 . + . ID=gene-LPH58_RS01075;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LPH58_RS01075;old_locus_tag=LPH58_01075 NZ_CP087690.1 Protein Homology CDS 284954 286465 . + 0 ID=cds-WP_038271083.1;Parent=gene-LPH58_RS01075;Dbxref=Genbank:WP_038271083.1;Name=WP_038271083.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660577.1;locus_tag=LPH58_RS01075;product=transcription termination factor NusA;protein_id=WP_038271083.1;transl_table=11 NZ_CP087690.1 RefSeq gene 286562 289225 . + . ID=gene-LPH58_RS01080;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LPH58_RS01080;old_locus_tag=LPH58_01080 NZ_CP087690.1 Protein Homology CDS 286562 289225 . + 0 ID=cds-WP_038271084.1;Parent=gene-LPH58_RS01080;Dbxref=Genbank:WP_038271084.1;Name=WP_038271084.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159225.1;locus_tag=LPH58_RS01080;product=translation initiation factor IF-2;protein_id=WP_038271084.1;transl_table=11 NZ_CP087690.1 RefSeq gene 289345 289722 . + . ID=gene-LPH58_RS01085;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LPH58_RS01085;old_locus_tag=LPH58_01085 NZ_CP087690.1 Protein Homology CDS 289345 289722 . + 0 ID=cds-WP_038271086.1;Parent=gene-LPH58_RS01085;Dbxref=Genbank:WP_038271086.1;Name=WP_038271086.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892777.1;locus_tag=LPH58_RS01085;product=30S ribosome-binding factor RbfA;protein_id=WP_038271086.1;transl_table=11 NZ_CP087690.1 RefSeq gene 289819 290721 . + . ID=gene-LPH58_RS01090;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LPH58_RS01090;old_locus_tag=LPH58_01090 NZ_CP087690.1 Protein Homology CDS 289819 290721 . + 0 ID=cds-WP_038271087.1;Parent=gene-LPH58_RS01090;Dbxref=Genbank:WP_038271087.1;Name=WP_038271087.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852611.1;locus_tag=LPH58_RS01090;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_038271087.1;transl_table=11 NZ_CP087690.1 RefSeq gene 290900 291160 . + . ID=gene-LPH58_RS01095;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LPH58_RS01095;old_locus_tag=LPH58_01095 NZ_CP087690.1 Protein Homology CDS 290900 291160 . + 0 ID=cds-WP_038271089.1;Parent=gene-LPH58_RS01095;Dbxref=Genbank:WP_038271089.1;Name=WP_038271089.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810194.1;locus_tag=LPH58_RS01095;product=30S ribosomal protein S15;protein_id=WP_038271089.1;transl_table=11 NZ_CP087690.1 RefSeq gene 291314 293416 . + . ID=gene-LPH58_RS01100;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LPH58_RS01100;old_locus_tag=LPH58_01100 NZ_CP087690.1 Protein Homology CDS 291314 293416 . + 0 ID=cds-WP_038271091.1;Parent=gene-LPH58_RS01100;Dbxref=Genbank:WP_038271091.1;Name=WP_038271091.1;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086257.1;locus_tag=LPH58_RS01100;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_038271091.1;transl_table=11 NZ_CP087690.1 RefSeq gene 293883 294314 . - . ID=gene-LPH58_RS01105;Name=LPH58_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01105;old_locus_tag=LPH58_01105 NZ_CP087690.1 Protein Homology CDS 293883 294314 . - 0 ID=cds-WP_038271092.1;Parent=gene-LPH58_RS01105;Dbxref=Genbank:WP_038271092.1;Name=WP_038271092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337583.1;locus_tag=LPH58_RS01105;product=helix-turn-helix domain-containing protein;protein_id=WP_038271092.1;transl_table=11 NZ_CP087690.1 RefSeq gene 294430 295311 . + . ID=gene-LPH58_RS01110;Name=LPH58_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01110;old_locus_tag=LPH58_01110 NZ_CP087690.1 Protein Homology CDS 294430 295311 . + 0 ID=cds-WP_038271093.1;Parent=gene-LPH58_RS01110;Dbxref=Genbank:WP_038271093.1;Name=WP_038271093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089089.1;locus_tag=LPH58_RS01110;product=SDR family oxidoreductase;protein_id=WP_038271093.1;transl_table=11 NZ_CP087690.1 RefSeq gene 296757 299840 . - . ID=gene-LPH58_RS01115;Name=LPH58_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01115;old_locus_tag=LPH58_01115 NZ_CP087690.1 Protein Homology CDS 296757 299840 . - 0 ID=cds-WP_038271094.1;Parent=gene-LPH58_RS01115;Dbxref=Genbank:WP_038271094.1;Name=WP_038271094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097539.1;locus_tag=LPH58_RS01115;product=efflux RND transporter permease subunit;protein_id=WP_038271094.1;transl_table=11 NZ_CP087690.1 RefSeq gene 299837 300946 . - . ID=gene-LPH58_RS01120;Name=LPH58_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01120;old_locus_tag=LPH58_01120 NZ_CP087690.1 Protein Homology CDS 299837 300946 . - 0 ID=cds-WP_081755432.1;Parent=gene-LPH58_RS01120;Dbxref=Genbank:WP_081755432.1;Name=WP_081755432.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851442.1;locus_tag=LPH58_RS01120;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_081755432.1;transl_table=11 NZ_CP087690.1 RefSeq gene 301586 301714 . + . ID=gene-LPH58_RS11900;Name=LPH58_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11900 NZ_CP087690.1 GeneMarkS-2+ CDS 301586 301714 . + 0 ID=cds-WP_267903166.1;Parent=gene-LPH58_RS11900;Dbxref=Genbank:WP_267903166.1;Name=WP_267903166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11900;product=hypothetical protein;protein_id=WP_267903166.1;transl_table=11 NZ_CP087690.1 RefSeq gene 301872 302684 . - . ID=gene-LPH58_RS01125;Name=LPH58_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01125;old_locus_tag=LPH58_01125 NZ_CP087690.1 Protein Homology CDS 301872 302684 . - 0 ID=cds-WP_081755431.1;Parent=gene-LPH58_RS01125;Dbxref=Genbank:WP_081755431.1;Name=WP_081755431.1;Ontology_term=GO:0006812,GO:0055085,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=solute:proton antiporter activity|0015299||IEA;go_process=cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013188.2;locus_tag=LPH58_RS01125;product=cation:proton antiporter;protein_id=WP_081755431.1;transl_table=11 NZ_CP087690.1 RefSeq gene 303467 303676 . - . ID=gene-LPH58_RS01130;Name=LPH58_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01130;old_locus_tag=LPH58_01130 NZ_CP087690.1 GeneMarkS-2+ CDS 303467 303676 . - 0 ID=cds-WP_038271095.1;Parent=gene-LPH58_RS01130;Dbxref=Genbank:WP_038271095.1;Name=WP_038271095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01130;product=hypothetical protein;protein_id=WP_038271095.1;transl_table=11 NZ_CP087690.1 RefSeq gene 303822 304721 . + . ID=gene-LPH58_RS01135;Name=LPH58_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01135;old_locus_tag=LPH58_01135 NZ_CP087690.1 Protein Homology CDS 303822 304721 . + 0 ID=cds-WP_171898070.1;Parent=gene-LPH58_RS01135;Dbxref=Genbank:WP_171898070.1;Name=WP_171898070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304048.1;locus_tag=LPH58_RS01135;product=DMT family transporter;protein_id=WP_171898070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 305451 305642 . - . ID=gene-LPH58_RS01140;Name=LPH58_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01140;old_locus_tag=LPH58_01140 NZ_CP087690.1 GeneMarkS-2+ CDS 305451 305642 . - 0 ID=cds-WP_114867058.1;Parent=gene-LPH58_RS01140;Dbxref=Genbank:WP_114867058.1;Name=WP_114867058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01140;product=hypothetical protein;protein_id=WP_114867058.1;transl_table=11 NZ_CP087690.1 RefSeq gene 306272 308095 . - . ID=gene-LPH58_RS01145;Name=LPH58_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01145;old_locus_tag=LPH58_01145 NZ_CP087690.1 Protein Homology CDS 306272 308095 . - 0 ID=cds-WP_038271096.1;Parent=gene-LPH58_RS01145;Dbxref=Genbank:WP_038271096.1;Name=WP_038271096.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851446.1;locus_tag=LPH58_RS01145;product=DEAD/DEAH box helicase;protein_id=WP_038271096.1;transl_table=11 NZ_CP087690.1 RefSeq gene 308451 309398 . - . ID=gene-LPH58_RS01150;Name=LPH58_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01150;old_locus_tag=LPH58_01150 NZ_CP087690.1 Protein Homology CDS 308451 309398 . - 0 ID=cds-WP_038271097.1;Parent=gene-LPH58_RS01150;Dbxref=Genbank:WP_038271097.1;Name=WP_038271097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449664.1;locus_tag=LPH58_RS01150;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_038271097.1;transl_table=11 NZ_CP087690.1 RefSeq gene 309395 310144 . - . ID=gene-LPH58_RS01155;Name=LPH58_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01155;old_locus_tag=LPH58_01155 NZ_CP087690.1 Protein Homology CDS 309395 310144 . - 0 ID=cds-WP_038271098.1;Parent=gene-LPH58_RS01155;Dbxref=Genbank:WP_038271098.1;Name=WP_038271098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086235.1;locus_tag=LPH58_RS01155;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_038271098.1;transl_table=11 NZ_CP087690.1 RefSeq gene 310358 311413 . + . ID=gene-LPH58_RS01160;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LPH58_RS01160;old_locus_tag=LPH58_01160 NZ_CP087690.1 Protein Homology CDS 310358 311413 . + 0 ID=cds-WP_038271099.1;Parent=gene-LPH58_RS01160;Dbxref=Genbank:WP_038271099.1;Name=WP_038271099.1;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011270013.1;locus_tag=LPH58_RS01160;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_038271099.1;transl_table=11 NZ_CP087690.1 RefSeq gene 311476 312363 . + . ID=gene-LPH58_RS01165;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LPH58_RS01165;old_locus_tag=LPH58_01165 NZ_CP087690.1 Protein Homology CDS 311476 312363 . + 0 ID=cds-WP_038271100.1;Parent=gene-LPH58_RS01165;Dbxref=Genbank:WP_038271100.1;Name=WP_038271100.1;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903936.1;locus_tag=LPH58_RS01165;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_038271100.1;transl_table=11 NZ_CP087690.1 RefSeq gene 312360 312917 . + . ID=gene-LPH58_RS01170;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LPH58_RS01170;old_locus_tag=LPH58_01170 NZ_CP087690.1 Protein Homology CDS 312360 312917 . + 0 ID=cds-WP_038271101.1;Parent=gene-LPH58_RS01170;Dbxref=Genbank:WP_038271101.1;Name=WP_038271101.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010377788.1;locus_tag=LPH58_RS01170;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_038271101.1;transl_table=11 NZ_CP087690.1 RefSeq gene 312914 313822 . + . ID=gene-LPH58_RS01175;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LPH58_RS01175;old_locus_tag=LPH58_01175 NZ_CP087690.1 Protein Homology CDS 312914 313822 . + 0 ID=cds-WP_038271102.1;Parent=gene-LPH58_RS01175;Dbxref=Genbank:WP_038271102.1;Name=WP_038271102.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851453.1;locus_tag=LPH58_RS01175;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_038271102.1;transl_table=11 NZ_CP087690.1 RefSeq gene 313991 315394 . - . ID=gene-LPH58_RS01180;Name=LPH58_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01180;old_locus_tag=LPH58_01180 NZ_CP087690.1 Protein Homology CDS 313991 315394 . - 0 ID=cds-WP_038271103.1;Parent=gene-LPH58_RS01180;Dbxref=Genbank:WP_038271103.1;Name=WP_038271103.1;Ontology_term=GO:0009103,GO:0004476;gbkey=CDS;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850199.1;locus_tag=LPH58_RS01180;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_038271103.1;transl_table=11 NZ_CP087690.1 RefSeq gene 315454 316803 . - . ID=gene-LPH58_RS01185;Name=LPH58_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01185;old_locus_tag=LPH58_01185 NZ_CP087690.1 Protein Homology CDS 315454 316803 . - 0 ID=cds-WP_038271104.1;Parent=gene-LPH58_RS01185;Dbxref=Genbank:WP_038271104.1;Name=WP_038271104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851455.1;locus_tag=LPH58_RS01185;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_038271104.1;transl_table=11 NZ_CP087690.1 RefSeq gene 318551 318769 . + . ID=gene-LPH58_RS01190;Name=LPH58_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01190;old_locus_tag=LPH58_01190 NZ_CP087690.1 GeneMarkS-2+ CDS 318551 318769 . + 0 ID=cds-WP_152536606.1;Parent=gene-LPH58_RS01190;Dbxref=Genbank:WP_152536606.1;Name=WP_152536606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01190;product=hypothetical protein;protein_id=WP_152536606.1;transl_table=11 NZ_CP087690.1 RefSeq gene 319092 319400 . + . ID=gene-LPH58_RS01195;Name=LPH58_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01195;old_locus_tag=LPH58_01195 NZ_CP087690.1 Protein Homology CDS 319092 319400 . + 0 ID=cds-WP_038271109.1;Parent=gene-LPH58_RS01195;Dbxref=Genbank:WP_038271109.1;Name=WP_038271109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892802.1;locus_tag=LPH58_RS01195;product=hypothetical protein;protein_id=WP_038271109.1;transl_table=11 NZ_CP087690.1 RefSeq gene 320893 321300 . + . ID=gene-LPH58_RS01200;Name=LPH58_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01200;old_locus_tag=LPH58_01200 NZ_CP087690.1 GeneMarkS-2+ CDS 320893 321300 . + 0 ID=cds-WP_069636209.1;Parent=gene-LPH58_RS01200;Dbxref=Genbank:WP_069636209.1;Name=WP_069636209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01200;product=hypothetical protein;protein_id=WP_069636209.1;transl_table=11 NZ_CP087690.1 RefSeq gene 321641 321763 . - . ID=gene-LPH58_RS11905;Name=LPH58_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11905 NZ_CP087690.1 GeneMarkS-2+ CDS 321641 321763 . - 0 ID=cds-WP_267903167.1;Parent=gene-LPH58_RS11905;Dbxref=Genbank:WP_267903167.1;Name=WP_267903167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11905;product=hypothetical protein;protein_id=WP_267903167.1;transl_table=11 NZ_CP087690.1 RefSeq gene 321969 322280 . + . ID=gene-LPH58_RS01205;Name=LPH58_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01205;old_locus_tag=LPH58_01205 NZ_CP087690.1 Protein Homology CDS 321969 322280 . + 0 ID=cds-WP_038271126.1;Parent=gene-LPH58_RS01205;Dbxref=Genbank:WP_038271126.1;Name=WP_038271126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011153918.1;locus_tag=LPH58_RS01205;product=hypothetical protein;protein_id=WP_038271126.1;transl_table=11 NZ_CP087690.1 RefSeq gene 322337 322684 . + . ID=gene-LPH58_RS01210;Name=LPH58_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01210;old_locus_tag=LPH58_01210 NZ_CP087690.1 GeneMarkS-2+ CDS 322337 322684 . + 0 ID=cds-WP_230428150.1;Parent=gene-LPH58_RS01210;Dbxref=Genbank:WP_230428150.1;Name=WP_230428150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01210;product=hypothetical protein;protein_id=WP_230428150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 322692 322898 . - . ID=gene-LPH58_RS01215;Name=LPH58_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01215;old_locus_tag=LPH58_01215 NZ_CP087690.1 GeneMarkS-2+ CDS 322692 322898 . - 0 ID=cds-WP_069636211.1;Parent=gene-LPH58_RS01215;Dbxref=Genbank:WP_069636211.1;Name=WP_069636211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01215;product=hypothetical protein;protein_id=WP_069636211.1;transl_table=11 NZ_CP087690.1 RefSeq gene 323094 323258 . - . ID=gene-LPH58_RS01220;Name=LPH58_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01220;old_locus_tag=LPH58_01220 NZ_CP087690.1 GeneMarkS-2+ CDS 323094 323258 . - 0 ID=cds-WP_160165166.1;Parent=gene-LPH58_RS01220;Dbxref=Genbank:WP_160165166.1;Name=WP_160165166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01220;product=hypothetical protein;protein_id=WP_160165166.1;transl_table=11 NZ_CP087690.1 RefSeq gene 323895 324089 . - . ID=gene-LPH58_RS01225;Name=LPH58_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01225;old_locus_tag=LPH58_01225 NZ_CP087690.1 GeneMarkS-2+ CDS 323895 324089 . - 0 ID=cds-WP_038271113.1;Parent=gene-LPH58_RS01225;Dbxref=Genbank:WP_038271113.1;Name=WP_038271113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01225;product=hypothetical protein;protein_id=WP_038271113.1;transl_table=11 NZ_CP087690.1 RefSeq gene 324337 327228 . + . ID=gene-LPH58_RS01230;Name=LPH58_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01230;old_locus_tag=LPH58_01230 NZ_CP087690.1 Protein Homology CDS 324337 327228 . + 0 ID=cds-WP_171898040.1;Parent=gene-LPH58_RS01230;Dbxref=Genbank:WP_171898040.1;Name=WP_171898040.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097586.1;locus_tag=LPH58_RS01230;product=S8 family serine peptidase;protein_id=WP_171898040.1;transl_table=11 NZ_CP087690.1 RefSeq gene 327962 328627 . - . ID=gene-LPH58_RS11910;Name=LPH58_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11910 NZ_CP087690.1 GeneMarkS-2+ CDS 327962 328627 . - 0 ID=cds-WP_267903168.1;Parent=gene-LPH58_RS11910;Dbxref=Genbank:WP_267903168.1;Name=WP_267903168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11910;product=hypothetical protein;protein_id=WP_267903168.1;transl_table=11 NZ_CP087690.1 RefSeq gene 328722 331343 . + . ID=gene-LPH58_RS01235;Name=LPH58_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01235;old_locus_tag=LPH58_01235 NZ_CP087690.1 Protein Homology CDS 328722 331343 . + 0 ID=cds-WP_267903169.1;Parent=gene-LPH58_RS01235;Dbxref=Genbank:WP_267903169.1;Name=WP_267903169.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337847.1;locus_tag=LPH58_RS01235;product=S8 family serine peptidase;protein_id=WP_267903169.1;transl_table=11 NZ_CP087690.1 RefSeq gene 331526 332701 . - . ID=gene-LPH58_RS01240;Name=LPH58_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01240;old_locus_tag=LPH58_01240 NZ_CP087690.1 Protein Homology CDS 331526 332701 . - 0 ID=cds-WP_230428151.1;Parent=gene-LPH58_RS01240;Dbxref=Genbank:WP_230428151.1;Name=WP_230428151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097547.1;locus_tag=LPH58_RS01240;product=MFS transporter;protein_id=WP_230428151.1;transl_table=11 NZ_CP087690.1 RefSeq gene 333375 333788 . + . ID=gene-LPH58_RS01245;Name=LPH58_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01245;old_locus_tag=LPH58_01245 NZ_CP087690.1 GeneMarkS-2+ CDS 333375 333788 . + 0 ID=cds-WP_069636205.1;Parent=gene-LPH58_RS01245;Dbxref=Genbank:WP_069636205.1;Name=WP_069636205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01245;product=SAM-dependent methyltransferase;protein_id=WP_069636205.1;transl_table=11 NZ_CP087690.1 RefSeq gene 334095 334670 . - . ID=gene-LPH58_RS01250;Name=LPH58_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01250;old_locus_tag=LPH58_01250 NZ_CP087690.1 Protein Homology CDS 334095 334670 . - 0 ID=cds-WP_038270840.1;Parent=gene-LPH58_RS01250;Dbxref=Genbank:WP_038270840.1;Name=WP_038270840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851002.1;locus_tag=LPH58_RS01250;product=DUF1439 domain-containing protein;protein_id=WP_038270840.1;transl_table=11 NZ_CP087690.1 RefSeq gene 335144 336397 . - . ID=gene-LPH58_RS01255;Name=LPH58_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01255;old_locus_tag=LPH58_01255 NZ_CP087690.1 Protein Homology CDS 335144 336397 . - 0 ID=cds-WP_038270837.1;Parent=gene-LPH58_RS01255;Dbxref=Genbank:WP_038270837.1;Name=WP_038270837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087999.1;locus_tag=LPH58_RS01255;product=6-phosphofructokinase;protein_id=WP_038270837.1;transl_table=11 NZ_CP087690.1 RefSeq gene 336542 337105 . + . ID=gene-LPH58_RS01260;Name=LPH58_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01260;old_locus_tag=LPH58_01260 NZ_CP087690.1 Protein Homology CDS 336542 337105 . + 0 ID=cds-WP_038270836.1;Parent=gene-LPH58_RS01260;Dbxref=Genbank:WP_038270836.1;Name=WP_038270836.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364422.1;locus_tag=LPH58_RS01260;product=adenylate kinase;protein_id=WP_038270836.1;transl_table=11 NZ_CP087690.1 RefSeq gene 337393 338808 . + . ID=gene-LPH58_RS01265;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LPH58_RS01265;old_locus_tag=LPH58_01265 NZ_CP087690.1 Protein Homology CDS 337393 338808 . + 0 ID=cds-WP_038270870.1;Parent=gene-LPH58_RS01265;Dbxref=Genbank:WP_038270870.1;Name=WP_038270870.1;Ontology_term=GO:0009252,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851061.1;locus_tag=LPH58_RS01265;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_038270870.1;transl_table=11 NZ_CP087690.1 RefSeq gene 339444 341471 . - . ID=gene-LPH58_RS01270;Name=LPH58_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01270;old_locus_tag=LPH58_01270 NZ_CP087690.1 Protein Homology CDS 339444 341471 . - 0 ID=cds-WP_038270834.1;Parent=gene-LPH58_RS01270;Dbxref=Genbank:WP_038270834.1;Name=WP_038270834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851005.1;locus_tag=LPH58_RS01270;product=bifunctional DedA family/phosphatase PAP2 family protein;protein_id=WP_038270834.1;transl_table=11 NZ_CP087690.1 RefSeq gene 341562 342221 . + . ID=gene-LPH58_RS01275;Name=LPH58_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01275;old_locus_tag=LPH58_01275 NZ_CP087690.1 Protein Homology CDS 341562 342221 . + 0 ID=cds-WP_038270869.1;Parent=gene-LPH58_RS01275;Dbxref=Genbank:WP_038270869.1;Name=WP_038270869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087991.1;locus_tag=LPH58_RS01275;product=serine/threonine-protein kinase;protein_id=WP_038270869.1;transl_table=11 NZ_CP087690.1 RefSeq gene 342766 342987 . + . ID=gene-LPH58_RS01280;Name=LPH58_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01280;old_locus_tag=LPH58_01280 NZ_CP087690.1 GeneMarkS-2+ CDS 342766 342987 . + 0 ID=cds-WP_152536597.1;Parent=gene-LPH58_RS01280;Dbxref=Genbank:WP_152536597.1;Name=WP_152536597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01280;product=hypothetical protein;protein_id=WP_152536597.1;transl_table=11 NZ_CP087690.1 RefSeq gene 343312 343542 . + . ID=gene-LPH58_RS01285;Name=LPH58_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01285;old_locus_tag=LPH58_01285 NZ_CP087690.1 GeneMarkS-2+ CDS 343312 343542 . + 0 ID=cds-WP_152536596.1;Parent=gene-LPH58_RS01285;Dbxref=Genbank:WP_152536596.1;Name=WP_152536596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01285;product=hypothetical protein;protein_id=WP_152536596.1;transl_table=11 NZ_CP087690.1 RefSeq gene 344389 344532 . + . ID=gene-LPH58_RS01290;Name=LPH58_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01290;old_locus_tag=LPH58_01290 NZ_CP087690.1 GeneMarkS-2+ CDS 344389 344532 . + 0 ID=cds-WP_160199328.1;Parent=gene-LPH58_RS01290;Dbxref=Genbank:WP_160199328.1;Name=WP_160199328.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01290;product=hypothetical protein;protein_id=WP_160199328.1;transl_table=11 NZ_CP087690.1 RefSeq gene 344565 345425 . + . ID=gene-LPH58_RS01295;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LPH58_RS01295;old_locus_tag=LPH58_01295 NZ_CP087690.1 Protein Homology CDS 344565 345425 . + 0 ID=cds-WP_051482288.1;Parent=gene-LPH58_RS01295;Dbxref=Genbank:WP_051482288.1;Name=WP_051482288.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902633.1;locus_tag=LPH58_RS01295;product=EamA family transporter RarD;protein_id=WP_051482288.1;transl_table=11 NZ_CP087690.1 RefSeq gene 346174 347541 . - . ID=gene-LPH58_RS01300;Name=LPH58_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01300;old_locus_tag=LPH58_01300 NZ_CP087690.1 Protein Homology CDS 346174 347541 . - 0 ID=cds-WP_038270828.1;Parent=gene-LPH58_RS01300;Dbxref=Genbank:WP_038270828.1;Name=WP_038270828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851007.1;locus_tag=LPH58_RS01300;product=M17 family metallopeptidase;protein_id=WP_038270828.1;transl_table=11 NZ_CP087690.1 RefSeq gene 347789 348022 . - . ID=gene-LPH58_RS01305;Name=LPH58_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01305;old_locus_tag=LPH58_01305 NZ_CP087690.1 GeneMarkS-2+ CDS 347789 348022 . - 0 ID=cds-WP_152536595.1;Parent=gene-LPH58_RS01305;Dbxref=Genbank:WP_152536595.1;Name=WP_152536595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01305;product=hypothetical protein;protein_id=WP_152536595.1;transl_table=11 NZ_CP087690.1 RefSeq gene 348070 349179 . - . ID=gene-LPH58_RS01310;Name=LPH58_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01310;old_locus_tag=LPH58_01310 NZ_CP087690.1 Protein Homology CDS 348070 349179 . - 0 ID=cds-WP_038270826.1;Parent=gene-LPH58_RS01310;Dbxref=Genbank:WP_038270826.1;Name=WP_038270826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087985.1;locus_tag=LPH58_RS01310;product=AI-2E family transporter;protein_id=WP_038270826.1;transl_table=11 NZ_CP087690.1 RefSeq gene 349264 349653 . - . ID=gene-LPH58_RS01315;Name=LPH58_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01315;old_locus_tag=LPH58_01315 NZ_CP087690.1 Protein Homology CDS 349264 349653 . - 0 ID=cds-WP_038270824.1;Parent=gene-LPH58_RS01315;Dbxref=Genbank:WP_038270824.1;Name=WP_038270824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851009.1;locus_tag=LPH58_RS01315;product=hypothetical protein;protein_id=WP_038270824.1;transl_table=11 NZ_CP087690.1 RefSeq gene 349650 350129 . - . ID=gene-LPH58_RS01320;Name=LPH58_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01320;old_locus_tag=LPH58_01320 NZ_CP087690.1 Protein Homology CDS 349650 350129 . - 0 ID=cds-WP_051482286.1;Parent=gene-LPH58_RS01320;Dbxref=Genbank:WP_051482286.1;Name=WP_051482286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085335.1;locus_tag=LPH58_RS01320;product=hypothetical protein;protein_id=WP_051482286.1;transl_table=11 NZ_CP087690.1 RefSeq gene 350135 350497 . - . ID=gene-LPH58_RS01325;Name=LPH58_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01325;old_locus_tag=LPH58_01325 NZ_CP087690.1 Protein Homology CDS 350135 350497 . - 0 ID=cds-WP_038270823.1;Parent=gene-LPH58_RS01325;Dbxref=Genbank:WP_038270823.1;Name=WP_038270823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010486932.1;locus_tag=LPH58_RS01325;product=hypothetical protein;protein_id=WP_038270823.1;transl_table=11 NZ_CP087690.1 RefSeq gene 350790 352235 . - . ID=gene-LPH58_RS01330;Name=LPH58_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01330;old_locus_tag=LPH58_01330 NZ_CP087690.1 Protein Homology CDS 350790 352235 . - 0 ID=cds-WP_038270822.1;Parent=gene-LPH58_RS01330;Dbxref=Genbank:WP_038270822.1;Name=WP_038270822.1;Ontology_term=GO:0006508,GO:0006950,GO:0004252,GO:0005515,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257055.1;locus_tag=LPH58_RS01330;product=Do family serine endopeptidase;protein_id=WP_038270822.1;transl_table=11 NZ_CP087690.1 RefSeq gene 353066 353962 . - . ID=gene-LPH58_RS01335;Name=LPH58_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01335;old_locus_tag=LPH58_01335 NZ_CP087690.1 Protein Homology CDS 353066 353962 . - 0 ID=cds-WP_038270821.1;Parent=gene-LPH58_RS01335;Dbxref=Genbank:WP_038270821.1;Name=WP_038270821.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851011.1;locus_tag=LPH58_RS01335;product=TIGR01777 family oxidoreductase;protein_id=WP_038270821.1;transl_table=11 NZ_CP087690.1 RefSeq gene 355318 357003 . - . ID=gene-LPH58_RS01340;Name=LPH58_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01340;old_locus_tag=LPH58_01340 NZ_CP087690.1 Protein Homology CDS 355318 357003 . - 0 ID=cds-WP_038270820.1;Parent=gene-LPH58_RS01340;Dbxref=Genbank:WP_038270820.1;Name=WP_038270820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571491.1;locus_tag=LPH58_RS01340;product=long-chain fatty acid--CoA ligase;protein_id=WP_038270820.1;transl_table=11 NZ_CP087690.1 RefSeq gene 358315 361056 . - . ID=gene-LPH58_RS01345;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LPH58_RS01345;old_locus_tag=LPH58_01345 NZ_CP087690.1 Protein Homology CDS 358315 361056 . - 0 ID=cds-WP_038270818.1;Parent=gene-LPH58_RS01345;Dbxref=Genbank:WP_038270818.1;Name=WP_038270818.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851015.1;locus_tag=LPH58_RS01345;product=aconitate hydratase AcnA;protein_id=WP_038270818.1;transl_table=11 NZ_CP087690.1 RefSeq gene 361313 361552 . + . ID=gene-LPH58_RS01350;Name=LPH58_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01350;old_locus_tag=LPH58_01350 NZ_CP087690.1 Protein Homology CDS 361313 361552 . + 0 ID=cds-WP_038270817.1;Parent=gene-LPH58_RS01350;Dbxref=Genbank:WP_038270817.1;Name=WP_038270817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085317.1;locus_tag=LPH58_RS01350;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038270817.1;transl_table=11 NZ_CP087690.1 RefSeq gene 361557 361955 . + . ID=gene-LPH58_RS01355;Name=LPH58_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01355;old_locus_tag=LPH58_01355 NZ_CP087690.1 Protein Homology CDS 361557 361955 . + 0 ID=cds-WP_038270867.1;Parent=gene-LPH58_RS01355;Dbxref=Genbank:WP_038270867.1;Name=WP_038270867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267153.1;locus_tag=LPH58_RS01355;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_038270867.1;transl_table=11 NZ_CP087690.1 RefSeq gene 362005 364608 . + . ID=gene-LPH58_RS01360;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LPH58_RS01360;old_locus_tag=LPH58_01360 NZ_CP087690.1 Protein Homology CDS 362005 364608 . + 0 ID=cds-WP_038270816.1;Parent=gene-LPH58_RS01360;Dbxref=Genbank:WP_038270816.1;Name=WP_038270816.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnB;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908727.1;locus_tag=LPH58_RS01360;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_038270816.1;transl_table=11 NZ_CP087690.1 RefSeq gene 365258 365333 . + . ID=gene-LPH58_RS01365;Name=LPH58_RS01365;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS01365;old_locus_tag=LPH58_01365 NZ_CP087690.1 tRNAscan-SE tRNA 365258 365333 . + . ID=rna-LPH58_RS01365;Parent=gene-LPH58_RS01365;anticodon=(pos:365291..365293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01365;product=tRNA-Phe NZ_CP087690.1 tRNAscan-SE exon 365258 365333 . + . ID=exon-LPH58_RS01365-1;Parent=rna-LPH58_RS01365;anticodon=(pos:365291..365293);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01365;product=tRNA-Phe NZ_CP087690.1 RefSeq gene 365554 365784 . + . ID=gene-LPH58_RS01370;Name=LPH58_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01370;old_locus_tag=LPH58_01370 NZ_CP087690.1 Protein Homology CDS 365554 365784 . + 0 ID=cds-WP_069636204.1;Parent=gene-LPH58_RS01370;Dbxref=Genbank:WP_069636204.1;Name=WP_069636204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011806707.1;locus_tag=LPH58_RS01370;product=hypothetical protein;protein_id=WP_069636204.1;transl_table=11 NZ_CP087690.1 RefSeq gene 365850 367610 . + . ID=gene-LPH58_RS01375;Name=LPH58_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01375;old_locus_tag=LPH58_01375 NZ_CP087690.1 Protein Homology CDS 365850 367610 . + 0 ID=cds-WP_038270814.1;Parent=gene-LPH58_RS01375;Dbxref=Genbank:WP_038270814.1;Name=WP_038270814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903354.1;locus_tag=LPH58_RS01375;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_038270814.1;transl_table=11 NZ_CP087690.1 RefSeq gene 367600 368973 . + . ID=gene-LPH58_RS01380;Name=LPH58_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01380;old_locus_tag=LPH58_01380 NZ_CP087690.1 GeneMarkS-2+ CDS 367600 368973 . + 0 ID=cds-WP_051482285.1;Parent=gene-LPH58_RS01380;Dbxref=Genbank:WP_051482285.1;Name=WP_051482285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01380;product=restriction endonuclease subunit S;protein_id=WP_051482285.1;transl_table=11 NZ_CP087690.1 RefSeq gene 368970 369995 . + . ID=gene-LPH58_RS01385;Name=LPH58_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01385;old_locus_tag=LPH58_01385 NZ_CP087690.1 Protein Homology CDS 368970 369995 . + 0 ID=cds-WP_205395222.1;Parent=gene-LPH58_RS01385;Dbxref=Genbank:WP_205395222.1;Name=WP_205395222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.2;locus_tag=LPH58_RS01385;product=SIR2 family protein;protein_id=WP_205395222.1;transl_table=11 NZ_CP087690.1 RefSeq gene 369985 370446 . + . ID=gene-LPH58_RS01390;Name=LPH58_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01390;old_locus_tag=LPH58_01390 NZ_CP087690.1 Protein Homology CDS 369985 370446 . + 0 ID=cds-WP_200866187.1;Parent=gene-LPH58_RS01390;Dbxref=Genbank:WP_200866187.1;Name=WP_200866187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025468.2;locus_tag=LPH58_RS01390;product=DUF4276 family protein;protein_id=WP_200866187.1;transl_table=11 NZ_CP087690.1 RefSeq gene 370455 373625 . + . ID=gene-LPH58_RS01395;Name=LPH58_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01395;old_locus_tag=LPH58_01395 NZ_CP087690.1 Protein Homology CDS 370455 373625 . + 0 ID=cds-WP_038270864.1;Parent=gene-LPH58_RS01395;Dbxref=Genbank:WP_038270864.1;Name=WP_038270864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001001495.1;locus_tag=LPH58_RS01395;product=type I restriction endonuclease subunit R;protein_id=WP_038270864.1;transl_table=11 NZ_CP087690.1 RefSeq gene 373811 374671 . + . ID=gene-LPH58_RS01400;Name=LPH58_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01400;old_locus_tag=LPH58_01400 NZ_CP087690.1 GeneMarkS-2+ CDS 373811 374671 . + 0 ID=cds-WP_160165153.1;Parent=gene-LPH58_RS01400;Dbxref=Genbank:WP_160165153.1;Name=WP_160165153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01400;product=ABC transporter permease;protein_id=WP_160165153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 374785 375135 . + . ID=gene-LPH58_RS01405;Name=LPH58_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01405;old_locus_tag=LPH58_01405 NZ_CP087690.1 GeneMarkS-2+ CDS 374785 375135 . + 0 ID=cds-WP_160199326.1;Parent=gene-LPH58_RS01405;Dbxref=Genbank:WP_160199326.1;Name=WP_160199326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01405;product=hypothetical protein;protein_id=WP_160199326.1;transl_table=11 NZ_CP087690.1 RefSeq gene 376273 377025 . + . ID=gene-LPH58_RS01410;Name=LPH58_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01410;old_locus_tag=LPH58_01410 NZ_CP087690.1 Protein Homology CDS 376273 377025 . + 0 ID=cds-WP_038270810.1;Parent=gene-LPH58_RS01410;Dbxref=Genbank:WP_038270810.1;Name=WP_038270810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LPH58_RS01410;product=SDR family oxidoreductase;protein_id=WP_038270810.1;transl_table=11 NZ_CP087690.1 RefSeq gene 377423 378199 . + . ID=gene-LPH58_RS01415;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LPH58_RS01415;old_locus_tag=LPH58_01415 NZ_CP087690.1 Protein Homology CDS 377423 378199 . + 0 ID=cds-WP_038270809.1;Parent=gene-LPH58_RS01415;Dbxref=Genbank:WP_038270809.1;Name=WP_038270809.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156090.1;locus_tag=LPH58_RS01415;product=triose-phosphate isomerase;protein_id=WP_038270809.1;transl_table=11 NZ_CP087690.1 RefSeq gene 378193 378603 . + . ID=gene-LPH58_RS01420;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LPH58_RS01420;old_locus_tag=LPH58_01420 NZ_CP087690.1 Protein Homology CDS 378193 378603 . + 0 ID=cds-WP_038270808.1;Parent=gene-LPH58_RS01420;Dbxref=Genbank:WP_038270808.1;Name=WP_038270808.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892840.1;locus_tag=LPH58_RS01420;product=preprotein translocase subunit SecG;protein_id=WP_038270808.1;transl_table=11 NZ_CP087690.1 RefSeq gene 378654 378738 . + . ID=gene-LPH58_RS01425;Name=LPH58_RS01425;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS01425;old_locus_tag=LPH58_01425 NZ_CP087690.1 tRNAscan-SE tRNA 378654 378738 . + . ID=rna-LPH58_RS01425;Parent=gene-LPH58_RS01425;anticodon=(pos:378688..378690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01425;product=tRNA-Leu NZ_CP087690.1 tRNAscan-SE exon 378654 378738 . + . ID=exon-LPH58_RS01425-1;Parent=rna-LPH58_RS01425;anticodon=(pos:378688..378690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS01425;product=tRNA-Leu NZ_CP087690.1 RefSeq gene 378852 379208 . + . ID=gene-LPH58_RS01430;Name=LPH58_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01430;old_locus_tag=LPH58_01430 NZ_CP087690.1 Protein Homology CDS 378852 379208 . + 0 ID=cds-WP_038270807.1;Parent=gene-LPH58_RS01430;Dbxref=Genbank:WP_038270807.1;Name=WP_038270807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003467430.1;locus_tag=LPH58_RS01430;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_038270807.1;transl_table=11 NZ_CP087690.1 RefSeq gene 379199 379753 . + . ID=gene-LPH58_RS01435;Name=LPH58_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01435;old_locus_tag=LPH58_01435 NZ_CP087690.1 Protein Homology CDS 379199 379753 . + 0 ID=cds-WP_038270806.1;Parent=gene-LPH58_RS01435;Dbxref=Genbank:WP_038270806.1;Name=WP_038270806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914280.1;locus_tag=LPH58_RS01435;product=NADH-quinone oxidoreductase subunit B;protein_id=WP_038270806.1;transl_table=11 NZ_CP087690.1 RefSeq gene 379804 380541 . + . ID=gene-LPH58_RS01440;Name=LPH58_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01440;old_locus_tag=LPH58_01440 NZ_CP087690.1 Protein Homology CDS 379804 380541 . + 0 ID=cds-WP_038270805.1;Parent=gene-LPH58_RS01440;Dbxref=Genbank:WP_038270805.1;Name=WP_038270805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927494.1;locus_tag=LPH58_RS01440;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_038270805.1;transl_table=11 NZ_CP087690.1 RefSeq gene 380542 381849 . + . ID=gene-LPH58_RS01445;Name=LPH58_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01445;old_locus_tag=LPH58_01445 NZ_CP087690.1 Protein Homology CDS 380542 381849 . + 0 ID=cds-WP_038270803.1;Parent=gene-LPH58_RS01445;Dbxref=Genbank:WP_038270803.1;Name=WP_038270803.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810223.1;locus_tag=LPH58_RS01445;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_038270803.1;transl_table=11 NZ_CP087690.1 RefSeq gene 381846 382373 . + . ID=gene-LPH58_RS01450;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LPH58_RS01450;old_locus_tag=LPH58_01450 NZ_CP087690.1 Protein Homology CDS 381846 382373 . + 0 ID=cds-WP_038270802.1;Parent=gene-LPH58_RS01450;Dbxref=Genbank:WP_038270802.1;Name=WP_038270802.1;gbkey=CDS;gene=nuoE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410460.1;locus_tag=LPH58_RS01450;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_038270802.1;transl_table=11 NZ_CP087690.1 RefSeq gene 382378 383712 . + . ID=gene-LPH58_RS01455;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LPH58_RS01455;old_locus_tag=LPH58_01455 NZ_CP087690.1 Protein Homology CDS 382378 383712 . + 0 ID=cds-WP_038270862.1;Parent=gene-LPH58_RS01455;Dbxref=Genbank:WP_038270862.1;Name=WP_038270862.1;Ontology_term=GO:0050136;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851036.1;locus_tag=LPH58_RS01455;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_038270862.1;transl_table=11 NZ_CP087690.1 RefSeq gene 383709 385943 . + . ID=gene-LPH58_RS01460;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LPH58_RS01460;old_locus_tag=LPH58_01460 NZ_CP087690.1 Protein Homology CDS 383709 385943 . + 0 ID=cds-WP_114867061.1;Parent=gene-LPH58_RS01460;Dbxref=Genbank:WP_114867061.1;Name=WP_114867061.1;Ontology_term=GO:0006120,GO:0050136;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) activity|0050136||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851037.1;locus_tag=LPH58_RS01460;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_114867061.1;transl_table=11 NZ_CP087690.1 RefSeq gene 385940 387031 . + . ID=gene-LPH58_RS01465;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LPH58_RS01465;old_locus_tag=LPH58_01465 NZ_CP087690.1 Protein Homology CDS 385940 387031 . + 0 ID=cds-WP_038270800.1;Parent=gene-LPH58_RS01465;Dbxref=Genbank:WP_038270800.1;Name=WP_038270800.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375869.1;locus_tag=LPH58_RS01465;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_038270800.1;transl_table=11 NZ_CP087690.1 RefSeq gene 387035 387523 . + . ID=gene-LPH58_RS01470;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LPH58_RS01470;old_locus_tag=LPH58_01470 NZ_CP087690.1 Protein Homology CDS 387035 387523 . + 0 ID=cds-WP_038270799.1;Parent=gene-LPH58_RS01470;Dbxref=Genbank:WP_038270799.1;Name=WP_038270799.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927506.1;locus_tag=LPH58_RS01470;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_038270799.1;transl_table=11 NZ_CP087690.1 RefSeq gene 387531 388193 . + . ID=gene-LPH58_RS01475;Name=LPH58_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01475;old_locus_tag=LPH58_01475 NZ_CP087690.1 Protein Homology CDS 387531 388193 . + 0 ID=cds-WP_038270860.1;Parent=gene-LPH58_RS01475;Dbxref=Genbank:WP_038270860.1;Name=WP_038270860.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085294.1;locus_tag=LPH58_RS01475;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_038270860.1;transl_table=11 NZ_CP087690.1 RefSeq gene 388190 388495 . + . ID=gene-LPH58_RS01480;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LPH58_RS01480;old_locus_tag=LPH58_01480 NZ_CP087690.1 Protein Homology CDS 388190 388495 . + 0 ID=cds-WP_038270798.1;Parent=gene-LPH58_RS01480;Dbxref=Genbank:WP_038270798.1;Name=WP_038270798.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450557.1;locus_tag=LPH58_RS01480;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_038270798.1;transl_table=11 NZ_CP087690.1 RefSeq gene 388503 390650 . + . ID=gene-LPH58_RS01485;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LPH58_RS01485;old_locus_tag=LPH58_01485 NZ_CP087690.1 Protein Homology CDS 388503 390650 . + 0 ID=cds-WP_038270797.1;Parent=gene-LPH58_RS01485;Dbxref=Genbank:WP_038270797.1;Name=WP_038270797.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485563.1;locus_tag=LPH58_RS01485;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_038270797.1;transl_table=11 NZ_CP087690.1 RefSeq gene 390672 392177 . + . ID=gene-LPH58_RS01490;Name=LPH58_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01490;old_locus_tag=LPH58_01490 NZ_CP087690.1 Protein Homology CDS 390672 392177 . + 0 ID=cds-WP_038270796.1;Parent=gene-LPH58_RS01490;Dbxref=Genbank:WP_038270796.1;Name=WP_038270796.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300411.1;locus_tag=LPH58_RS01490;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_038270796.1;transl_table=11 NZ_CP087690.1 RefSeq gene 392212 393669 . + . ID=gene-LPH58_RS01495;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LPH58_RS01495;old_locus_tag=LPH58_01495 NZ_CP087690.1 Protein Homology CDS 392212 393669 . + 0 ID=cds-WP_038270795.1;Parent=gene-LPH58_RS01495;Dbxref=Genbank:WP_038270795.1;Name=WP_038270795.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485567.1;locus_tag=LPH58_RS01495;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_038270795.1;transl_table=11 NZ_CP087690.1 RefSeq gene 394029 394769 . - . ID=gene-LPH58_RS01500;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=LPH58_RS01500;old_locus_tag=LPH58_01500 NZ_CP087690.1 Protein Homology CDS 394029 394769 . - 0 ID=cds-WP_038270793.1;Parent=gene-LPH58_RS01500;Dbxref=Genbank:WP_038270793.1;Name=WP_038270793.1;Ontology_term=GO:0042619,GO:0018454;gbkey=CDS;gene=phbB;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085289.1;locus_tag=LPH58_RS01500;product=acetoacetyl-CoA reductase;protein_id=WP_038270793.1;transl_table=11 NZ_CP087690.1 RefSeq gene 394828 396159 . - . ID=gene-LPH58_RS01505;Name=LPH58_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01505;old_locus_tag=LPH58_01505 NZ_CP087690.1 Protein Homology CDS 394828 396159 . - 0 ID=cds-WP_038270792.1;Parent=gene-LPH58_RS01505;Dbxref=Genbank:WP_038270792.1;Name=WP_038270792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085288.1;locus_tag=LPH58_RS01505;product=CitMHS family transporter;protein_id=WP_038270792.1;transl_table=11 NZ_CP087690.1 RefSeq gene 396292 397482 . - . ID=gene-LPH58_RS01510;Name=LPH58_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01510;old_locus_tag=LPH58_01510 NZ_CP087690.1 Protein Homology CDS 396292 397482 . - 0 ID=cds-WP_038270791.1;Parent=gene-LPH58_RS01510;Dbxref=Genbank:WP_038270791.1;Name=WP_038270791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852491.1;locus_tag=LPH58_RS01510;product=OprO/OprP family phosphate-selective porin;protein_id=WP_038270791.1;transl_table=11 NZ_CP087690.1 RefSeq gene 397688 398377 . + . ID=gene-LPH58_RS01515;Name=LPH58_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01515;old_locus_tag=LPH58_01515 NZ_CP087690.1 Protein Homology CDS 397688 398377 . + 0 ID=cds-WP_038270790.1;Parent=gene-LPH58_RS01515;Dbxref=Genbank:WP_038270790.1;Name=WP_038270790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085286.1;locus_tag=LPH58_RS01515;product=response regulator transcription factor;protein_id=WP_038270790.1;transl_table=11 NZ_CP087690.1 RefSeq gene 398367 399749 . + . ID=gene-LPH58_RS01520;Name=LPH58_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01520;old_locus_tag=LPH58_01520 NZ_CP087690.1 Protein Homology CDS 398367 399749 . + 0 ID=cds-WP_038270789.1;Parent=gene-LPH58_RS01520;Dbxref=Genbank:WP_038270789.1;Name=WP_038270789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852489.1;locus_tag=LPH58_RS01520;product=sensor histidine kinase;protein_id=WP_038270789.1;transl_table=11 NZ_CP087690.1 RefSeq gene 399746 400789 . + . ID=gene-LPH58_RS01525;Name=LPH58_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01525;old_locus_tag=LPH58_01525 NZ_CP087690.1 Protein Homology CDS 399746 400789 . + 0 ID=cds-WP_171898041.1;Parent=gene-LPH58_RS01525;Dbxref=Genbank:WP_171898041.1;Name=WP_171898041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157495.1;locus_tag=LPH58_RS01525;product=ABC transporter substrate-binding protein;protein_id=WP_171898041.1;transl_table=11 NZ_CP087690.1 RefSeq gene 401497 402129 . + . ID=gene-LPH58_RS01530;Name=LPH58_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01530;old_locus_tag=LPH58_01530 NZ_CP087690.1 Protein Homology CDS 401497 402129 . + 0 ID=cds-WP_038270788.1;Parent=gene-LPH58_RS01530;Dbxref=Genbank:WP_038270788.1;Name=WP_038270788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097569.1;locus_tag=LPH58_RS01530;product=response regulator transcription factor;protein_id=WP_038270788.1;transl_table=11 NZ_CP087690.1 RefSeq gene 402172 403809 . - . ID=gene-LPH58_RS01535;Name=LPH58_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01535;old_locus_tag=LPH58_01535 NZ_CP087690.1 Protein Homology CDS 402172 403809 . - 0 ID=cds-WP_081755415.1;Parent=gene-LPH58_RS01535;Dbxref=Genbank:WP_081755415.1;Name=WP_081755415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017165838.1;locus_tag=LPH58_RS01535;product=PAS-domain containing protein;protein_id=WP_081755415.1;transl_table=11 NZ_CP087690.1 RefSeq gene 404638 405807 . - . ID=gene-LPH58_RS01540;Name=LPH58_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01540;old_locus_tag=LPH58_01540 NZ_CP087690.1 Protein Homology CDS 404638 405807 . - 0 ID=cds-WP_038270786.1;Parent=gene-LPH58_RS01540;Dbxref=Genbank:WP_038270786.1;Name=WP_038270786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087915.1;locus_tag=LPH58_RS01540;product=porin;protein_id=WP_038270786.1;transl_table=11 NZ_CP087690.1 RefSeq gene 406104 407444 . + . ID=gene-LPH58_RS01545;Name=LPH58_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01545;old_locus_tag=LPH58_01545 NZ_CP087690.1 Protein Homology CDS 406104 407444 . + 0 ID=cds-WP_038270785.1;Parent=gene-LPH58_RS01545;Dbxref=Genbank:WP_038270785.1;Name=WP_038270785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087914.1;locus_tag=LPH58_RS01545;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_038270785.1;transl_table=11 NZ_CP087690.1 RefSeq gene 407609 409903 . + . ID=gene-LPH58_RS01550;Name=LPH58_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01550;old_locus_tag=LPH58_01550 NZ_CP087690.1 Protein Homology CDS 407609 409903 . + 0 ID=cds-WP_038270784.1;Parent=gene-LPH58_RS01550;Dbxref=Genbank:WP_038270784.1;Name=WP_038270784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893496.1;locus_tag=LPH58_RS01550;product=NADP-dependent malic enzyme;protein_id=WP_038270784.1;transl_table=11 NZ_CP087690.1 RefSeq gene 410147 412051 . - . ID=gene-LPH58_RS01555;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LPH58_RS01555;old_locus_tag=LPH58_01555 NZ_CP087690.1 Protein Homology CDS 410147 412051 . - 0 ID=cds-WP_038270783.1;Parent=gene-LPH58_RS01555;Dbxref=Genbank:WP_038270783.1;Name=WP_038270783.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303855.1;locus_tag=LPH58_RS01555;product=molecular chaperone HtpG;protein_id=WP_038270783.1;transl_table=11 NZ_CP087690.1 RefSeq gene 412225 412854 . + . ID=gene-LPH58_RS01560;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LPH58_RS01560;old_locus_tag=LPH58_01560 NZ_CP087690.1 Protein Homology CDS 412225 412854 . + 0 ID=cds-WP_038270857.1;Parent=gene-LPH58_RS01560;Dbxref=Genbank:WP_038270857.1;Name=WP_038270857.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852480.1;locus_tag=LPH58_RS01560;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_038270857.1;transl_table=11 NZ_CP087690.1 RefSeq gene 412851 413339 . + . ID=gene-LPH58_RS01565;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LPH58_RS01565;old_locus_tag=LPH58_01565 NZ_CP087690.1 Protein Homology CDS 412851 413339 . + 0 ID=cds-WP_038270782.1;Parent=gene-LPH58_RS01565;Dbxref=Genbank:WP_038270782.1;Name=WP_038270782.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409091.1;locus_tag=LPH58_RS01565;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_038270782.1;transl_table=11 NZ_CP087690.1 RefSeq gene 413388 413882 . + . ID=gene-LPH58_RS01570;Name=LPH58_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01570;old_locus_tag=LPH58_01570 NZ_CP087690.1 Protein Homology CDS 413388 413882 . + 0 ID=cds-WP_038270781.1;Parent=gene-LPH58_RS01570;Dbxref=Genbank:WP_038270781.1;Name=WP_038270781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157277.1;locus_tag=LPH58_RS01570;product=hypothetical protein;protein_id=WP_038270781.1;transl_table=11 NZ_CP087690.1 RefSeq gene 414045 414329 . + . ID=gene-LPH58_RS01575;Name=LPH58_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01575;old_locus_tag=LPH58_01575 NZ_CP087690.1 Protein Homology CDS 414045 414329 . + 0 ID=cds-WP_038270856.1;Parent=gene-LPH58_RS01575;Dbxref=Genbank:WP_038270856.1;Name=WP_038270856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851038.1;locus_tag=LPH58_RS01575;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_038270856.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 414437 416086 . + . ID=gene-LPH58_RS01580;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=pseudogene;locus_tag=LPH58_RS01580;old_locus_tag=LPH58_01580;partial=true;pseudo=true;start_range=.,414437 NZ_CP087690.1 Protein Homology CDS 414437 416086 . + 0 ID=cds-LPH58_RS01580;Parent=gene-LPH58_RS01580;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006750;gbkey=CDS;gene=ggt;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157276.1;locus_tag=LPH58_RS01580;partial=true;product=gamma-glutamyltransferase;pseudo=true;start_range=.,414437;transl_table=11 NZ_CP087690.1 RefSeq gene 417056 418741 . + . ID=gene-LPH58_RS01585;Name=LPH58_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01585;old_locus_tag=LPH58_01585 NZ_CP087690.1 Protein Homology CDS 417056 418741 . + 0 ID=cds-WP_230428268.1;Parent=gene-LPH58_RS01585;Dbxref=Genbank:WP_230428268.1;Name=WP_230428268.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097571.1;locus_tag=LPH58_RS01585;product=diguanylate cyclase;protein_id=WP_230428268.1;transl_table=11 NZ_CP087690.1 RefSeq gene 418841 419644 . - . ID=gene-LPH58_RS01590;Name=LPH58_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01590;old_locus_tag=LPH58_01590 NZ_CP087690.1 Protein Homology CDS 418841 419644 . - 0 ID=cds-WP_230428269.1;Parent=gene-LPH58_RS01590;Dbxref=Genbank:WP_230428269.1;Name=WP_230428269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269661.1;locus_tag=LPH58_RS01590;product=M23 family metallopeptidase;protein_id=WP_230428269.1;transl_table=11 NZ_CP087690.1 RefSeq gene 419692 421041 . - . ID=gene-LPH58_RS01595;Name=LPH58_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01595;old_locus_tag=LPH58_01595 NZ_CP087690.1 Protein Homology CDS 419692 421041 . - 0 ID=cds-WP_038270776.1;Parent=gene-LPH58_RS01595;Dbxref=Genbank:WP_038270776.1;Name=WP_038270776.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302579.1;locus_tag=LPH58_RS01595;product=dihydroorotase;protein_id=WP_038270776.1;transl_table=11 NZ_CP087690.1 RefSeq gene 421038 421301 . - . ID=gene-LPH58_RS01600;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LPH58_RS01600;old_locus_tag=LPH58_01600 NZ_CP087690.1 Protein Homology CDS 421038 421301 . - 0 ID=cds-WP_038270775.1;Parent=gene-LPH58_RS01600;Dbxref=Genbank:WP_038270775.1;Name=WP_038270775.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893508.1;locus_tag=LPH58_RS01600;product=membrane protein insertion efficiency factor YidD;protein_id=WP_038270775.1;transl_table=11 NZ_CP087690.1 RefSeq gene 421409 422347 . + . ID=gene-LPH58_RS01605;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LPH58_RS01605;old_locus_tag=LPH58_01605 NZ_CP087690.1 Protein Homology CDS 421409 422347 . + 0 ID=cds-WP_038270774.1;Parent=gene-LPH58_RS01605;Dbxref=Genbank:WP_038270774.1;Name=WP_038270774.1;Ontology_term=GO:0006355,GO:0019899;gbkey=CDS;gene=dksA;go_function=enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085263.1;locus_tag=LPH58_RS01605;product=RNA polymerase-binding protein DksA;protein_id=WP_038270774.1;transl_table=11 NZ_CP087690.1 RefSeq gene 422530 423576 . + . ID=gene-LPH58_RS01610;Name=LPH58_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01610;old_locus_tag=LPH58_01610 NZ_CP087690.1 Protein Homology CDS 422530 423576 . + 0 ID=cds-WP_038270773.1;Parent=gene-LPH58_RS01610;Dbxref=Genbank:WP_038270773.1;Name=WP_038270773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852338.1;locus_tag=LPH58_RS01610;product=alpha/beta fold hydrolase;protein_id=WP_038270773.1;transl_table=11 NZ_CP087690.1 RefSeq gene 424128 424277 . + . ID=gene-LPH58_RS01615;Name=LPH58_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01615;old_locus_tag=LPH58_01615 NZ_CP087690.1 GeneMarkS-2+ CDS 424128 424277 . + 0 ID=cds-WP_230428153.1;Parent=gene-LPH58_RS01615;Dbxref=Genbank:WP_230428153.1;Name=WP_230428153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01615;product=hypothetical protein;protein_id=WP_230428153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 424410 424808 . + . ID=gene-LPH58_RS01620;Name=LPH58_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01620;old_locus_tag=LPH58_01620 NZ_CP087690.1 GeneMarkS-2+ CDS 424410 424808 . + 0 ID=cds-WP_051482281.1;Parent=gene-LPH58_RS01620;Dbxref=Genbank:WP_051482281.1;Name=WP_051482281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01620;product=hypothetical protein;protein_id=WP_051482281.1;transl_table=11 NZ_CP087690.1 RefSeq gene 425106 426350 . - . ID=gene-LPH58_RS01625;Name=LPH58_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01625;old_locus_tag=LPH58_01625 NZ_CP087690.1 Protein Homology CDS 425106 426350 . - 0 ID=cds-WP_038270772.1;Parent=gene-LPH58_RS01625;Dbxref=Genbank:WP_038270772.1;Name=WP_038270772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097573.1;locus_tag=LPH58_RS01625;product=MFS transporter;protein_id=WP_038270772.1;transl_table=11 NZ_CP087690.1 RefSeq gene 426347 426787 . - . ID=gene-LPH58_RS01630;Name=LPH58_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01630;old_locus_tag=LPH58_01630 NZ_CP087690.1 Protein Homology CDS 426347 426787 . - 0 ID=cds-WP_038270771.1;Parent=gene-LPH58_RS01630;Dbxref=Genbank:WP_038270771.1;Name=WP_038270771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087898.1;locus_tag=LPH58_RS01630;product=SufE family protein;protein_id=WP_038270771.1;transl_table=11 NZ_CP087690.1 RefSeq gene 427006 428406 . - . ID=gene-LPH58_RS01635;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LPH58_RS01635;old_locus_tag=LPH58_01635 NZ_CP087690.1 Protein Homology CDS 427006 428406 . - 0 ID=cds-WP_038270770.1;Parent=gene-LPH58_RS01635;Dbxref=Genbank:WP_038270770.1;Name=WP_038270770.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852341.1;locus_tag=LPH58_RS01635;product=cysteine--tRNA ligase;protein_id=WP_038270770.1;transl_table=11 NZ_CP087690.1 RefSeq gene 428563 429105 . + . ID=gene-LPH58_RS01640;Name=LPH58_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01640;old_locus_tag=LPH58_01640 NZ_CP087690.1 Protein Homology CDS 428563 429105 . + 0 ID=cds-WP_038270769.1;Parent=gene-LPH58_RS01640;Dbxref=Genbank:WP_038270769.1;Name=WP_038270769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607601.1;locus_tag=LPH58_RS01640;product=hypothetical protein;protein_id=WP_038270769.1;transl_table=11 NZ_CP087690.1 RefSeq gene 429483 430493 . + . ID=gene-LPH58_RS01645;Name=LPH58_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01645;old_locus_tag=LPH58_01645 NZ_CP087690.1 Protein Homology CDS 429483 430493 . + 0 ID=cds-WP_114867062.1;Parent=gene-LPH58_RS01645;Dbxref=Genbank:WP_114867062.1;Name=WP_114867062.1;Ontology_term=GO:0042450,GO:0016597,GO:0043857;gbkey=CDS;go_function=amino acid binding|0016597||IEA,N-acetylornithine carbamoyltransferase activity|0043857||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087894.1;locus_tag=LPH58_RS01645;product=N-acetylornithine carbamoyltransferase;protein_id=WP_114867062.1;transl_table=11 NZ_CP087690.1 RefSeq gene 430522 431727 . + . ID=gene-LPH58_RS01650;Name=LPH58_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01650;old_locus_tag=LPH58_01650 NZ_CP087690.1 Protein Homology CDS 430522 431727 . + 0 ID=cds-WP_038270767.1;Parent=gene-LPH58_RS01650;Dbxref=Genbank:WP_038270767.1;Name=WP_038270767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097576.1;locus_tag=LPH58_RS01650;product=argininosuccinate synthase;protein_id=WP_038270767.1;transl_table=11 NZ_CP087690.1 RefSeq gene 432475 433566 . + . ID=gene-LPH58_RS01655;Name=LPH58_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01655;old_locus_tag=LPH58_01655 NZ_CP087690.1 Protein Homology CDS 432475 433566 . + 0 ID=cds-WP_038270765.1;Parent=gene-LPH58_RS01655;Dbxref=Genbank:WP_038270765.1;Name=WP_038270765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852343.1;locus_tag=LPH58_RS01655;product=acetylornithine deacetylase;protein_id=WP_038270765.1;transl_table=11 NZ_CP087690.1 RefSeq gene 433631 434947 . + . ID=gene-LPH58_RS01660;Name=LPH58_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01660;old_locus_tag=LPH58_01660 NZ_CP087690.1 Protein Homology CDS 433631 434947 . + 0 ID=cds-WP_038270764.1;Parent=gene-LPH58_RS01660;Dbxref=Genbank:WP_038270764.1;Name=WP_038270764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085241.1;locus_tag=LPH58_RS01660;product=acetylglutamate kinase;protein_id=WP_038270764.1;transl_table=11 NZ_CP087690.1 RefSeq gene 434976 435176 . - . ID=gene-LPH58_RS01665;Name=LPH58_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01665;old_locus_tag=LPH58_01665 NZ_CP087690.1 GeneMarkS-2+ CDS 434976 435176 . - 0 ID=cds-WP_152536591.1;Parent=gene-LPH58_RS01665;Dbxref=Genbank:WP_152536591.1;Name=WP_152536591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01665;product=hypothetical protein;protein_id=WP_152536591.1;transl_table=11 NZ_CP087690.1 RefSeq gene 435258 436214 . + . ID=gene-LPH58_RS01670;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LPH58_RS01670;old_locus_tag=LPH58_01670 NZ_CP087690.1 Protein Homology CDS 435258 436214 . + 0 ID=cds-WP_038270762.1;Parent=gene-LPH58_RS01670;Dbxref=Genbank:WP_038270762.1;Name=WP_038270762.1;Ontology_term=GO:0006592,GO:0003942;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006378490.1;locus_tag=LPH58_RS01670;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_038270762.1;transl_table=11 NZ_CP087690.1 RefSeq gene 436291 437619 . + . ID=gene-LPH58_RS01675;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LPH58_RS01675;old_locus_tag=LPH58_01675 NZ_CP087690.1 Protein Homology CDS 436291 437619 . + 0 ID=cds-WP_038270761.1;Parent=gene-LPH58_RS01675;Dbxref=Genbank:WP_038270761.1;Name=WP_038270761.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087890.1;locus_tag=LPH58_RS01675;product=argininosuccinate lyase;protein_id=WP_038270761.1;transl_table=11 NZ_CP087690.1 RefSeq gene 437932 438081 . + . ID=gene-LPH58_RS01680;Name=LPH58_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01680;old_locus_tag=LPH58_01680 NZ_CP087690.1 GeneMarkS-2+ CDS 437932 438081 . + 0 ID=cds-WP_160165150.1;Parent=gene-LPH58_RS01680;Dbxref=Genbank:WP_160165150.1;Name=WP_160165150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01680;product=hypothetical protein;protein_id=WP_160165150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 438094 439254 . + . ID=gene-LPH58_RS01685;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LPH58_RS01685;old_locus_tag=LPH58_01685 NZ_CP087690.1 Protein Homology CDS 438094 439254 . + 0 ID=cds-WP_038270760.1;Parent=gene-LPH58_RS01685;Dbxref=Genbank:WP_038270760.1;Name=WP_038270760.1;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051522.1;locus_tag=LPH58_RS01685;product=glutamate 5-kinase;protein_id=WP_038270760.1;transl_table=11 NZ_CP087690.1 RefSeq gene 439708 440955 . + . ID=gene-LPH58_RS01690;Name=LPH58_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01690;old_locus_tag=LPH58_01690 NZ_CP087690.1 Protein Homology CDS 439708 440955 . + 0 ID=cds-WP_038270853.1;Parent=gene-LPH58_RS01690;Dbxref=Genbank:WP_038270853.1;Name=WP_038270853.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910533.1;locus_tag=LPH58_RS01690;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_038270853.1;transl_table=11 NZ_CP087690.1 RefSeq gene 441652 442020 . + . ID=gene-LPH58_RS01695;Name=LPH58_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01695;old_locus_tag=LPH58_01695 NZ_CP087690.1 Protein Homology CDS 441652 442020 . + 0 ID=cds-WP_038270759.1;Parent=gene-LPH58_RS01695;Dbxref=Genbank:WP_038270759.1;Name=WP_038270759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH58_RS01695;product=hypothetical protein;protein_id=WP_038270759.1;transl_table=11 NZ_CP087690.1 RefSeq gene 442244 442804 . + . ID=gene-LPH58_RS01700;Name=LPH58_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01700;old_locus_tag=LPH58_01700 NZ_CP087690.1 Protein Homology CDS 442244 442804 . + 0 ID=cds-WP_038270758.1;Parent=gene-LPH58_RS01700;Dbxref=Genbank:WP_038270758.1;Name=WP_038270758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005220837.1;locus_tag=LPH58_RS01700;product=recombinase family protein;protein_id=WP_038270758.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 442807 445630 . + . ID=gene-LPH58_RS01705;Name=LPH58_RS01705;end_range=445630,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01705;old_locus_tag=LPH58_01705;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 442807 445630 . + 0 ID=cds-LPH58_RS01705;Parent=gene-LPH58_RS01705;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=445630,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=LPH58_RS01705;partial=true;product=Tn3 family transposase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 445770 445910 . + . ID=gene-LPH58_RS01710;Name=LPH58_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01710;old_locus_tag=LPH58_01710 NZ_CP087690.1 GeneMarkS-2+ CDS 445770 445910 . + 0 ID=cds-WP_160165149.1;Parent=gene-LPH58_RS01710;Dbxref=Genbank:WP_160165149.1;Name=WP_160165149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01710;product=hypothetical protein;protein_id=WP_160165149.1;transl_table=11 NZ_CP087690.1 RefSeq gene 446297 447307 . - . ID=gene-LPH58_RS01715;Name=LPH58_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01715;old_locus_tag=LPH58_01715 NZ_CP087690.1 Protein Homology CDS 446297 447307 . - 0 ID=cds-WP_038270757.1;Parent=gene-LPH58_RS01715;Dbxref=Genbank:WP_038270757.1;Name=WP_038270757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895227.1;locus_tag=LPH58_RS01715;product=serine protease;protein_id=WP_038270757.1;transl_table=11 NZ_CP087690.1 RefSeq gene 448543 449934 . + . ID=gene-LPH58_RS01720;Name=LPH58_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01720;old_locus_tag=LPH58_01720 NZ_CP087690.1 Protein Homology CDS 448543 449934 . + 0 ID=cds-WP_051482280.1;Parent=gene-LPH58_RS01720;Dbxref=Genbank:WP_051482280.1;Name=WP_051482280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160583.1;locus_tag=LPH58_RS01720;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_051482280.1;transl_table=11 NZ_CP087690.1 RefSeq gene 450007 450621 . - . ID=gene-LPH58_RS01725;Name=LPH58_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01725;old_locus_tag=LPH58_01725 NZ_CP087690.1 Protein Homology CDS 450007 450621 . - 0 ID=cds-WP_230428270.1;Parent=gene-LPH58_RS01725;Dbxref=Genbank:WP_230428270.1;Name=WP_230428270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LPH58_RS01725;product=recombinase family protein;protein_id=WP_230428270.1;transl_table=11 NZ_CP087690.1 RefSeq gene 450756 450959 . - . ID=gene-LPH58_RS01730;Name=LPH58_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01730;old_locus_tag=LPH58_01730 NZ_CP087690.1 Protein Homology CDS 450756 450959 . - 0 ID=cds-WP_200866186.1;Parent=gene-LPH58_RS01730;Dbxref=Genbank:WP_200866186.1;Name=WP_200866186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016876.2;locus_tag=LPH58_RS01730;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_200866186.1;transl_table=11 NZ_CP087690.1 RefSeq gene 450956 451150 . - . ID=gene-LPH58_RS01735;Name=LPH58_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01735;old_locus_tag=LPH58_01735 NZ_CP087690.1 Protein Homology CDS 450956 451150 . - 0 ID=cds-WP_038270756.1;Parent=gene-LPH58_RS01735;Dbxref=Genbank:WP_038270756.1;Name=WP_038270756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408511.1;locus_tag=LPH58_RS01735;product=hypothetical protein;protein_id=WP_038270756.1;transl_table=11 NZ_CP087690.1 RefSeq gene 451394 451789 . + . ID=gene-LPH58_RS01740;Name=LPH58_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01740;old_locus_tag=LPH58_01740 NZ_CP087690.1 Protein Homology CDS 451394 451789 . + 0 ID=cds-WP_230428271.1;Parent=gene-LPH58_RS01740;Dbxref=Genbank:WP_230428271.1;Name=WP_230428271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025079.2;locus_tag=LPH58_RS01740;product=DUF4158 domain-containing protein;protein_id=WP_230428271.1;transl_table=11 NZ_CP087690.1 RefSeq gene 451918 452298 . + . ID=gene-LPH58_RS01745;Name=LPH58_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01745;old_locus_tag=LPH58_01745 NZ_CP087690.1 GeneMarkS-2+ CDS 451918 452298 . + 0 ID=cds-WP_038270750.1;Parent=gene-LPH58_RS01745;Dbxref=Genbank:WP_038270750.1;Name=WP_038270750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01745;product=hypothetical protein;protein_id=WP_038270750.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 452432 452515 . + . ID=gene-LPH58_RS01750;Name=LPH58_RS01750;end_range=452515,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01750;old_locus_tag=LPH58_01750;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 452432 452515 . + 0 ID=cds-LPH58_RS01750;Parent=gene-LPH58_RS01750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=452515,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017757.2;locus_tag=LPH58_RS01750;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 452627 452908 . + . ID=gene-LPH58_RS01755;Name=LPH58_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01755;old_locus_tag=LPH58_01755 NZ_CP087690.1 Protein Homology CDS 452627 452908 . + 0 ID=cds-WP_038270748.1;Parent=gene-LPH58_RS01755;Dbxref=Genbank:WP_038270748.1;Name=WP_038270748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091355.1;locus_tag=LPH58_RS01755;product=XRE family transcriptional regulator;protein_id=WP_038270748.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 453178 454307 . - . ID=gene-LPH58_RS01760;Name=LPH58_RS01760;end_range=454307,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01760;old_locus_tag=LPH58_01760;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 453178 454307 . - 0 ID=cds-LPH58_RS01760;Parent=gene-LPH58_RS01760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=454307,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337797.1;locus_tag=LPH58_RS01760;partial=true;product=DUF5710 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 454483 455320 . + . ID=gene-LPH58_RS01765;Name=LPH58_RS01765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01765;old_locus_tag=LPH58_01765;partial=true;pseudo=true;start_range=.,454483 NZ_CP087690.1 Protein Homology CDS 454483 455320 . + 0 ID=cds-LPH58_RS01765;Parent=gene-LPH58_RS01765;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161248.1;locus_tag=LPH58_RS01765;partial=true;product=VirB8/TrbF family protein;pseudo=true;start_range=.,454483;transl_table=11 NZ_CP087690.1 RefSeq gene 455336 456226 . + . ID=gene-LPH58_RS01770;Name=trbG;gbkey=Gene;gene=trbG;gene_biotype=protein_coding;locus_tag=LPH58_RS01770;old_locus_tag=LPH58_01770 NZ_CP087690.1 Protein Homology CDS 455336 456226 . + 0 ID=cds-WP_038270744.1;Parent=gene-LPH58_RS01770;Dbxref=Genbank:WP_038270744.1;Name=WP_038270744.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbG;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086695.1;locus_tag=LPH58_RS01770;product=P-type conjugative transfer protein TrbG;protein_id=WP_038270744.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 456346 456626 . + . ID=gene-LPH58_RS01775;Name=LPH58_RS01775;end_range=456626,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01775;old_locus_tag=LPH58_01775;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 456346 456626 . + 0 ID=cds-LPH58_RS01775;Parent=gene-LPH58_RS01775;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=456626,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018934.2;locus_tag=LPH58_RS01775;partial=true;product=conjugal transfer protein TrbH;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 456664 457518 . + . ID=gene-LPH58_RS01780;Name=LPH58_RS01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01780;old_locus_tag=LPH58_01780;partial=true;pseudo=true;start_range=.,456664 NZ_CP087690.1 Protein Homology CDS 456664 457518 . + 0 ID=cds-LPH58_RS01780;Parent=gene-LPH58_RS01780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091515.1;locus_tag=LPH58_RS01780;partial=true;product=conjugal transfer protein TrbI;pseudo=true;start_range=.,456664;transl_table=11 NZ_CP087690.1 RefSeq gene 457537 458310 . + . ID=gene-LPH58_RS01785;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=LPH58_RS01785;old_locus_tag=LPH58_01785 NZ_CP087690.1 Protein Homology CDS 457537 458310 . + 0 ID=cds-WP_038270743.1;Parent=gene-LPH58_RS01785;Dbxref=Genbank:WP_038270743.1;Name=WP_038270743.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086702.1;locus_tag=LPH58_RS01785;product=P-type conjugative transfer protein TrbJ;protein_id=WP_038270743.1;transl_table=11 NZ_CP087690.1 RefSeq gene 458327 458563 . + . ID=gene-LPH58_RS01790;Name=LPH58_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01790;old_locus_tag=LPH58_01790 NZ_CP087690.1 Protein Homology CDS 458327 458563 . + 0 ID=cds-WP_081755410.1;Parent=gene-LPH58_RS01790;Dbxref=Genbank:WP_081755410.1;Name=WP_081755410.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=LPH58_RS01790;product=EexN family lipoprotein;protein_id=WP_081755410.1;transl_table=11 NZ_CP087690.1 RefSeq gene 458580 460028 . + . ID=gene-LPH58_RS01795;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=LPH58_RS01795;old_locus_tag=LPH58_01795 NZ_CP087690.1 Protein Homology CDS 458580 460028 . + 0 ID=cds-WP_230428155.1;Parent=gene-LPH58_RS01795;Dbxref=Genbank:WP_230428155.1;Name=WP_230428155.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894502.1;locus_tag=LPH58_RS01795;product=P-type conjugative transfer protein TrbL;protein_id=WP_230428155.1;transl_table=11 NZ_CP087690.1 RefSeq gene 460064 460285 . + . ID=gene-LPH58_RS01800;Name=LPH58_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01800;old_locus_tag=LPH58_01800 NZ_CP087690.1 GeneMarkS-2+ CDS 460064 460285 . + 0 ID=cds-WP_038270739.1;Parent=gene-LPH58_RS01800;Dbxref=Genbank:WP_038270739.1;Name=WP_038270739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01800;product=hypothetical protein;protein_id=WP_038270739.1;transl_table=11 NZ_CP087690.1 RefSeq gene 460287 460895 . + . ID=gene-LPH58_RS01805;Name=LPH58_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01805;old_locus_tag=LPH58_01805 NZ_CP087690.1 Protein Homology CDS 460287 460895 . + 0 ID=cds-WP_038270737.1;Parent=gene-LPH58_RS01805;Dbxref=Genbank:WP_038270737.1;Name=WP_038270737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895232.1;locus_tag=LPH58_RS01805;product=transglycosylase SLT domain-containing protein;protein_id=WP_038270737.1;transl_table=11 NZ_CP087690.1 RefSeq gene 460905 462389 . - . ID=gene-LPH58_RS01810;Name=LPH58_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01810;old_locus_tag=LPH58_01810 NZ_CP087690.1 Protein Homology CDS 460905 462389 . - 0 ID=cds-WP_081755409.1;Parent=gene-LPH58_RS01810;Dbxref=Genbank:WP_081755409.1;Name=WP_081755409.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF024842.2;locus_tag=LPH58_RS01810;product=FAD-dependent oxidoreductase;protein_id=WP_081755409.1;transl_table=11 NZ_CP087690.1 RefSeq gene 462386 463108 . - . ID=gene-LPH58_RS01815;Name=LPH58_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01815;old_locus_tag=LPH58_01815 NZ_CP087690.1 Protein Homology CDS 462386 463108 . - 0 ID=cds-WP_230428156.1;Parent=gene-LPH58_RS01815;Dbxref=Genbank:WP_230428156.1;Name=WP_230428156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997681.1;locus_tag=LPH58_RS01815;product=cupin domain-containing protein;protein_id=WP_230428156.1;transl_table=11 NZ_CP087690.1 RefSeq gene 463125 463466 . - . ID=gene-LPH58_RS01820;Name=LPH58_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01820;old_locus_tag=LPH58_01820 NZ_CP087690.1 Protein Homology CDS 463125 463466 . - 0 ID=cds-WP_200866190.1;Parent=gene-LPH58_RS01820;Dbxref=Genbank:WP_200866190.1;Name=WP_200866190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997683.1;locus_tag=LPH58_RS01820;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_200866190.1;transl_table=11 NZ_CP087690.1 RefSeq gene 463582 464115 . - . ID=gene-LPH58_RS01825;Name=LPH58_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01825;old_locus_tag=LPH58_01825 NZ_CP087690.1 Protein Homology CDS 463582 464115 . - 0 ID=cds-WP_038270735.1;Parent=gene-LPH58_RS01825;Dbxref=Genbank:WP_038270735.1;Name=WP_038270735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014608.2;locus_tag=LPH58_RS01825;product=OsmC family protein;protein_id=WP_038270735.1;transl_table=11 NZ_CP087690.1 RefSeq gene 464112 464405 . - . ID=gene-LPH58_RS01830;Name=LPH58_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01830;old_locus_tag=LPH58_01830 NZ_CP087690.1 GeneMarkS-2+ CDS 464112 464405 . - 0 ID=cds-WP_200866185.1;Parent=gene-LPH58_RS01830;Dbxref=Genbank:WP_200866185.1;Name=WP_200866185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01830;product=hypothetical protein;protein_id=WP_200866185.1;transl_table=11 NZ_CP087690.1 RefSeq gene 464471 465244 . - . ID=gene-LPH58_RS01835;Name=LPH58_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01835;old_locus_tag=LPH58_01835 NZ_CP087690.1 Protein Homology CDS 464471 465244 . - 0 ID=cds-WP_038270733.1;Parent=gene-LPH58_RS01835;Dbxref=Genbank:WP_038270733.1;Name=WP_038270733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020203121.1;locus_tag=LPH58_RS01835;product=SDR family oxidoreductase;protein_id=WP_038270733.1;transl_table=11 NZ_CP087690.1 RefSeq gene 465442 466359 . + . ID=gene-LPH58_RS01840;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LPH58_RS01840;old_locus_tag=LPH58_01840 NZ_CP087690.1 Protein Homology CDS 465442 466359 . + 0 ID=cds-WP_038270732.1;Parent=gene-LPH58_RS01840;Dbxref=Genbank:WP_038270732.1;Name=WP_038270732.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020203122.1;locus_tag=LPH58_RS01840;product=transcriptional regulator GcvA;protein_id=WP_038270732.1;transl_table=11 NZ_CP087690.1 RefSeq gene 466387 466698 . - . ID=gene-LPH58_RS01845;Name=LPH58_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01845;old_locus_tag=LPH58_01845 NZ_CP087690.1 Protein Homology CDS 466387 466698 . - 0 ID=cds-WP_038270731.1;Parent=gene-LPH58_RS01845;Dbxref=Genbank:WP_038270731.1;Name=WP_038270731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850413.1;locus_tag=LPH58_RS01845;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038270731.1;transl_table=11 NZ_CP087690.1 RefSeq gene 466695 466946 . - . ID=gene-LPH58_RS01850;Name=LPH58_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01850;old_locus_tag=LPH58_01850 NZ_CP087690.1 Protein Homology CDS 466695 466946 . - 0 ID=cds-WP_038270730.1;Parent=gene-LPH58_RS01850;Dbxref=Genbank:WP_038270730.1;Name=WP_038270730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167341.1;locus_tag=LPH58_RS01850;product=antitoxin;protein_id=WP_038270730.1;transl_table=11 NZ_CP087690.1 RefSeq gene 467169 467762 . + . ID=gene-LPH58_RS01855;Name=LPH58_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01855;old_locus_tag=LPH58_01855 NZ_CP087690.1 Protein Homology CDS 467169 467762 . + 0 ID=cds-WP_038270729.1;Parent=gene-LPH58_RS01855;Dbxref=Genbank:WP_038270729.1;Name=WP_038270729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435588.1;locus_tag=LPH58_RS01855;product=recombinase family protein;protein_id=WP_038270729.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 467759 469070 . + . ID=gene-LPH58_RS01860;Name=LPH58_RS01860;end_range=469070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01860;old_locus_tag=LPH58_01860;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 467759 469070 . + 0 ID=cds-LPH58_RS01860;Parent=gene-LPH58_RS01860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=469070,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015060658.1;locus_tag=LPH58_RS01860;partial=true;product=DUF4158 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 469212 469583 . + . ID=gene-LPH58_RS01865;Name=LPH58_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01865;old_locus_tag=LPH58_01865 NZ_CP087690.1 Protein Homology CDS 469212 469583 . + 0 ID=cds-WP_038270728.1;Parent=gene-LPH58_RS01865;Dbxref=Genbank:WP_038270728.1;Name=WP_038270728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019465260.1;locus_tag=LPH58_RS01865;product=TIR domain-containing protein;protein_id=WP_038270728.1;transl_table=11 NZ_CP087690.1 RefSeq gene 469583 470569 . + . ID=gene-LPH58_RS01870;Name=LPH58_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01870;old_locus_tag=LPH58_01870 NZ_CP087690.1 Protein Homology CDS 469583 470569 . + 0 ID=cds-WP_038270726.1;Parent=gene-LPH58_RS01870;Dbxref=Genbank:WP_038270726.1;Name=WP_038270726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011979481.1;locus_tag=LPH58_RS01870;product=caspase family protein;protein_id=WP_038270726.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 470636 470782 . + . ID=gene-LPH58_RS01875;Name=LPH58_RS01875;end_range=470782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01875;old_locus_tag=LPH58_01875;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 470636 470782 . + 0 ID=cds-LPH58_RS01875;Parent=gene-LPH58_RS01875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=470782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1;locus_tag=LPH58_RS01875;partial=true;product=nucleotidyltransferase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 470748 471215 . + . ID=gene-LPH58_RS01880;Name=LPH58_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01880;old_locus_tag=LPH58_01880 NZ_CP087690.1 Protein Homology CDS 470748 471215 . + 0 ID=cds-WP_230428272.1;Parent=gene-LPH58_RS01880;Dbxref=Genbank:WP_230428272.1;Name=WP_230428272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435588.1;locus_tag=LPH58_RS01880;product=recombinase family protein;protein_id=WP_230428272.1;transl_table=11 NZ_CP087690.1 RefSeq gene 471390 471626 . - . ID=gene-LPH58_RS01885;Name=LPH58_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01885;old_locus_tag=LPH58_01885 NZ_CP087690.1 GeneMarkS-2+ CDS 471390 471626 . - 0 ID=cds-WP_152536590.1;Parent=gene-LPH58_RS01885;Dbxref=Genbank:WP_152536590.1;Name=WP_152536590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01885;product=hypothetical protein;protein_id=WP_152536590.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 471631 472242 . - . ID=gene-LPH58_RS01890;Name=LPH58_RS01890;end_range=472242,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01890;old_locus_tag=LPH58_01890;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 471631 472242 . - 0 ID=cds-LPH58_RS01890;Parent=gene-LPH58_RS01890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=472242,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894515.1;locus_tag=LPH58_RS01890;partial=true;product=toprim domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 472588 473088 . + . ID=gene-LPH58_RS01895;Name=LPH58_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01895;old_locus_tag=LPH58_01895 NZ_CP087690.1 Protein Homology CDS 472588 473088 . + 0 ID=cds-WP_038270725.1;Parent=gene-LPH58_RS01895;Dbxref=Genbank:WP_038270725.1;Name=WP_038270725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087880.1;locus_tag=LPH58_RS01895;product=hypothetical protein;protein_id=WP_038270725.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 473106 473300 . + . ID=gene-LPH58_RS01900;Name=LPH58_RS01900;end_range=473300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01900;old_locus_tag=LPH58_01900;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 473106 473300 . + 0 ID=cds-LPH58_RS01900;Parent=gene-LPH58_RS01900;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=473300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337617.1;locus_tag=LPH58_RS01900;partial=true;product=RTX toxin;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 473554 474063 . + . ID=gene-LPH58_RS01905;Name=LPH58_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01905;old_locus_tag=LPH58_01905 NZ_CP087690.1 Protein Homology CDS 473554 474063 . + 0 ID=cds-WP_038270724.1;Parent=gene-LPH58_RS01905;Dbxref=Genbank:WP_038270724.1;Name=WP_038270724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH58_RS01905;product=hypothetical protein;protein_id=WP_038270724.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 474081 474266 . + . ID=gene-LPH58_RS01910;Name=LPH58_RS01910;end_range=474266,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS01910;old_locus_tag=LPH58_01910;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 474081 474266 . + 0 ID=cds-LPH58_RS01910;Parent=gene-LPH58_RS01910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=474266,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087883.1;locus_tag=LPH58_RS01910;partial=true;product=RTX toxin;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 474530 475036 . + . ID=gene-LPH58_RS01915;Name=LPH58_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01915;old_locus_tag=LPH58_01915 NZ_CP087690.1 Protein Homology CDS 474530 475036 . + 0 ID=cds-WP_038270723.1;Parent=gene-LPH58_RS01915;Dbxref=Genbank:WP_038270723.1;Name=WP_038270723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH58_RS01915;product=hypothetical protein;protein_id=WP_038270723.1;transl_table=11 NZ_CP087690.1 RefSeq gene 475062 479363 . + . ID=gene-LPH58_RS01920;Name=LPH58_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01920;old_locus_tag=LPH58_01920 NZ_CP087690.1 Protein Homology CDS 475062 479363 . + 0 ID=cds-WP_114867063.1;Parent=gene-LPH58_RS01920;Dbxref=Genbank:WP_114867063.1;Name=WP_114867063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097580.1;locus_tag=LPH58_RS01920;product=calcium-binding protein;protein_id=WP_114867063.1;transl_table=11 NZ_CP087690.1 RefSeq gene 479607 480110 . - . ID=gene-LPH58_RS01925;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LPH58_RS01925;old_locus_tag=LPH58_01925 NZ_CP087690.1 Protein Homology CDS 479607 480110 . - 0 ID=cds-WP_051482387.1;Parent=gene-LPH58_RS01925;Dbxref=Genbank:WP_051482387.1;Name=WP_051482387.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852939.1;locus_tag=LPH58_RS01925;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_051482387.1;transl_table=11 NZ_CP087690.1 RefSeq gene 480118 480600 . - . ID=gene-LPH58_RS01930;Name=mntR;gbkey=Gene;gene=mntR;gene_biotype=protein_coding;locus_tag=LPH58_RS01930;old_locus_tag=LPH58_01930 NZ_CP087690.1 Protein Homology CDS 480118 480600 . - 0 ID=cds-WP_038272949.1;Parent=gene-LPH58_RS01930;Dbxref=Genbank:WP_038272949.1;Name=WP_038272949.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046914,GO:0046983;gbkey=CDS;gene=mntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transition metal ion binding|0046914||IEA,protein dimerization activity|0046983||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097582.1;locus_tag=LPH58_RS01930;product=manganese-binding transcriptional regulator MntR;protein_id=WP_038272949.1;transl_table=11 NZ_CP087690.1 RefSeq gene 480838 482184 . + . ID=gene-LPH58_RS01935;Name=LPH58_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01935;old_locus_tag=LPH58_01935 NZ_CP087690.1 Protein Homology CDS 480838 482184 . + 0 ID=cds-WP_038272931.1;Parent=gene-LPH58_RS01935;Dbxref=Genbank:WP_038272931.1;Name=WP_038272931.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097583.1;locus_tag=LPH58_RS01935;product=Nramp family divalent metal transporter;protein_id=WP_038272931.1;transl_table=11 NZ_CP087690.1 RefSeq gene 483116 483763 . + . ID=gene-LPH58_RS01940;Name=LPH58_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01940;old_locus_tag=LPH58_01940 NZ_CP087690.1 Protein Homology CDS 483116 483763 . + 0 ID=cds-WP_051482389.1;Parent=gene-LPH58_RS01940;Dbxref=Genbank:WP_051482389.1;Name=WP_051482389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023605.2;locus_tag=LPH58_RS01940;product=NotI family restriction endonuclease;protein_id=WP_051482389.1;transl_table=11 NZ_CP087690.1 RefSeq gene 483947 484972 . + . ID=gene-LPH58_RS01945;Name=LPH58_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01945;old_locus_tag=LPH58_01945 NZ_CP087690.1 GeneMarkS-2+ CDS 483947 484972 . + 0 ID=cds-WP_200866218.1;Parent=gene-LPH58_RS01945;Dbxref=Genbank:WP_200866218.1;Name=WP_200866218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01945;product=DNA adenine methylase;protein_id=WP_200866218.1;transl_table=11 NZ_CP087690.1 RefSeq gene 486162 486293 . + . ID=gene-LPH58_RS11915;Name=LPH58_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11915 NZ_CP087690.1 GeneMarkS-2+ CDS 486162 486293 . + 0 ID=cds-WP_267903170.1;Parent=gene-LPH58_RS11915;Dbxref=Genbank:WP_267903170.1;Name=WP_267903170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11915;product=hypothetical protein;protein_id=WP_267903170.1;transl_table=11 NZ_CP087690.1 RefSeq gene 486789 487592 . - . ID=gene-LPH58_RS01950;Name=LPH58_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01950;old_locus_tag=LPH58_01950 NZ_CP087690.1 Protein Homology CDS 486789 487592 . - 0 ID=cds-WP_051482390.1;Parent=gene-LPH58_RS01950;Dbxref=Genbank:WP_051482390.1;Name=WP_051482390.1;Ontology_term=GO:0016598,GO:0004057,GO:0008914;gbkey=CDS;go_function=arginyltransferase activity|0004057||IEA,leucyltransferase activity|0008914||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088071.1;locus_tag=LPH58_RS01950;product=arginyltransferase;protein_id=WP_051482390.1;transl_table=11 NZ_CP087690.1 RefSeq gene 488174 488665 . - . ID=gene-LPH58_RS01955;Name=LPH58_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01955;old_locus_tag=LPH58_01955 NZ_CP087690.1 Protein Homology CDS 488174 488665 . - 0 ID=cds-WP_038272934.1;Parent=gene-LPH58_RS01955;Dbxref=Genbank:WP_038272934.1;Name=WP_038272934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852934.1;locus_tag=LPH58_RS01955;product=DUF2007 domain-containing protein;protein_id=WP_038272934.1;transl_table=11 NZ_CP087690.1 RefSeq gene 488669 489505 . - . ID=gene-LPH58_RS01960;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=LPH58_RS01960;old_locus_tag=LPH58_01960 NZ_CP087690.1 Protein Homology CDS 488669 489505 . - 0 ID=cds-WP_038272936.1;Parent=gene-LPH58_RS01960;Dbxref=Genbank:WP_038272936.1;Name=WP_038272936.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852933.1;locus_tag=LPH58_RS01960;product=acyl-CoA thioesterase II;protein_id=WP_038272936.1;transl_table=11 NZ_CP087690.1 RefSeq gene 490212 490400 . - . ID=gene-LPH58_RS01965;Name=LPH58_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01965;old_locus_tag=LPH58_01965 NZ_CP087690.1 GeneMarkS-2+ CDS 490212 490400 . - 0 ID=cds-WP_038272941.1;Parent=gene-LPH58_RS01965;Dbxref=Genbank:WP_038272941.1;Name=WP_038272941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01965;product=hypothetical protein;protein_id=WP_038272941.1;transl_table=11 NZ_CP087690.1 RefSeq gene 491697 492008 . - . ID=gene-LPH58_RS01970;Name=LPH58_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01970;old_locus_tag=LPH58_01970 NZ_CP087690.1 Protein Homology CDS 491697 492008 . - 0 ID=cds-WP_038272945.1;Parent=gene-LPH58_RS01970;Dbxref=Genbank:WP_038272945.1;Name=WP_038272945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382447.1;locus_tag=LPH58_RS01970;product=hypothetical protein;protein_id=WP_038272945.1;transl_table=11 NZ_CP087690.1 RefSeq gene 492609 492776 . - . ID=gene-LPH58_RS01975;Name=LPH58_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01975;old_locus_tag=LPH58_01975 NZ_CP087690.1 GeneMarkS-2+ CDS 492609 492776 . - 0 ID=cds-WP_160199297.1;Parent=gene-LPH58_RS01975;Dbxref=Genbank:WP_160199297.1;Name=WP_160199297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01975;product=hypothetical protein;protein_id=WP_160199297.1;transl_table=11 NZ_CP087690.1 RefSeq gene 493132 493584 . - . ID=gene-LPH58_RS01980;Name=LPH58_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01980;old_locus_tag=LPH58_01980 NZ_CP087690.1 GeneMarkS-2+ CDS 493132 493584 . - 0 ID=cds-WP_230428157.1;Parent=gene-LPH58_RS01980;Dbxref=Genbank:WP_230428157.1;Name=WP_230428157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01980;product=hypothetical protein;protein_id=WP_230428157.1;transl_table=11 NZ_CP087690.1 RefSeq gene 493598 496279 . + . ID=gene-LPH58_RS01985;Name=LPH58_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01985;old_locus_tag=LPH58_01985 NZ_CP087690.1 Protein Homology CDS 493598 496279 . + 0 ID=cds-WP_230428158.1;Parent=gene-LPH58_RS01985;Dbxref=Genbank:WP_230428158.1;Name=WP_230428158.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607606.1;locus_tag=LPH58_RS01985;product=S8 family serine peptidase;protein_id=WP_230428158.1;transl_table=11 NZ_CP087690.1 RefSeq gene 497273 497369 . + . ID=gene-LPH58_RS01990;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LPH58_RS01990;old_locus_tag=LPH58_01990 NZ_CP087690.1 cmsearch SRP_RNA 497273 497369 . + . ID=rna-LPH58_RS01990;Parent=gene-LPH58_RS01990;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS01990;product=signal recognition particle sRNA small type NZ_CP087690.1 cmsearch exon 497273 497369 . + . ID=exon-LPH58_RS01990-1;Parent=rna-LPH58_RS01990;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS01990;product=signal recognition particle sRNA small type NZ_CP087690.1 RefSeq gene 499231 499437 . - . ID=gene-LPH58_RS01995;Name=LPH58_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS01995;old_locus_tag=LPH58_01995 NZ_CP087690.1 GeneMarkS-2+ CDS 499231 499437 . - 0 ID=cds-WP_038272450.1;Parent=gene-LPH58_RS01995;Dbxref=Genbank:WP_038272450.1;Name=WP_038272450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS01995;product=hypothetical protein;protein_id=WP_038272450.1;transl_table=11 NZ_CP087690.1 RefSeq gene 499434 501395 . - . ID=gene-LPH58_RS02000;Name=LPH58_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02000;old_locus_tag=LPH58_02000 NZ_CP087690.1 Protein Homology CDS 499434 501395 . - 0 ID=cds-WP_038272448.1;Parent=gene-LPH58_RS02000;Dbxref=Genbank:WP_038272448.1;Name=WP_038272448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893548.1;locus_tag=LPH58_RS02000;product=CocE/NonD family hydrolase;protein_id=WP_038272448.1;transl_table=11 NZ_CP087690.1 RefSeq gene 501924 502100 . + . ID=gene-LPH58_RS02005;Name=LPH58_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02005;old_locus_tag=LPH58_02005 NZ_CP087690.1 GeneMarkS-2+ CDS 501924 502100 . + 0 ID=cds-WP_171898043.1;Parent=gene-LPH58_RS02005;Dbxref=Genbank:WP_171898043.1;Name=WP_171898043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02005;product=hypothetical protein;protein_id=WP_171898043.1;transl_table=11 NZ_CP087690.1 RefSeq gene 502574 502783 . + . ID=gene-LPH58_RS02010;Name=LPH58_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02010;old_locus_tag=LPH58_02010 NZ_CP087690.1 GeneMarkS-2+ CDS 502574 502783 . + 0 ID=cds-WP_038272446.1;Parent=gene-LPH58_RS02010;Dbxref=Genbank:WP_038272446.1;Name=WP_038272446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02010;product=hypothetical protein;protein_id=WP_038272446.1;transl_table=11 NZ_CP087690.1 RefSeq gene 503939 506530 . - . ID=gene-LPH58_RS02015;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=LPH58_RS02015;old_locus_tag=LPH58_02015 NZ_CP087690.1 Protein Homology CDS 503939 506530 . - 0 ID=cds-WP_038272444.1;Parent=gene-LPH58_RS02015;Dbxref=Genbank:WP_038272444.1;Name=WP_038272444.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085224.1;locus_tag=LPH58_RS02015;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_038272444.1;transl_table=11 NZ_CP087690.1 RefSeq gene 506622 506807 . - . ID=gene-LPH58_RS02020;Name=LPH58_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02020;old_locus_tag=LPH58_02020 NZ_CP087690.1 GeneMarkS-2+ CDS 506622 506807 . - 0 ID=cds-WP_038272442.1;Parent=gene-LPH58_RS02020;Dbxref=Genbank:WP_038272442.1;Name=WP_038272442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02020;product=hypothetical protein;protein_id=WP_038272442.1;transl_table=11 NZ_CP087690.1 RefSeq gene 508943 511969 . + . ID=gene-LPH58_RS02025;Name=LPH58_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02025;old_locus_tag=LPH58_02025 NZ_CP087690.1 Protein Homology CDS 508943 511969 . + 0 ID=cds-WP_038272440.1;Parent=gene-LPH58_RS02025;Dbxref=Genbank:WP_038272440.1;Name=WP_038272440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085223.1;locus_tag=LPH58_RS02025;product=TonB-dependent receptor;protein_id=WP_038272440.1;transl_table=11 NZ_CP087690.1 RefSeq gene 512401 513843 . - . ID=gene-LPH58_RS02030;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LPH58_RS02030;old_locus_tag=LPH58_02030 NZ_CP087690.1 Protein Homology CDS 512401 513843 . - 0 ID=cds-WP_038272437.1;Parent=gene-LPH58_RS02030;Dbxref=Genbank:WP_038272437.1;Name=WP_038272437.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035988.1;locus_tag=LPH58_RS02030;product=adenosylhomocysteinase;protein_id=WP_038272437.1;transl_table=11 NZ_CP087690.1 cmsearch riboswitch 513884 513971 . - . ID=id-NZ_CP087690.1:513884..513971;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087690.1 RefSeq gene 515358 515609 . - . ID=gene-LPH58_RS02035;Name=LPH58_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02035;old_locus_tag=LPH58_02035 NZ_CP087690.1 GeneMarkS-2+ CDS 515358 515609 . - 0 ID=cds-WP_114867066.1;Parent=gene-LPH58_RS02035;Dbxref=Genbank:WP_114867066.1;Name=WP_114867066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02035;product=hypothetical protein;protein_id=WP_114867066.1;transl_table=11 NZ_CP087690.1 RefSeq gene 515961 517313 . + . ID=gene-LPH58_RS02040;Name=LPH58_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02040;old_locus_tag=LPH58_02040 NZ_CP087690.1 Protein Homology CDS 515961 517313 . + 0 ID=cds-WP_038272456.1;Parent=gene-LPH58_RS02040;Dbxref=Genbank:WP_038272456.1;Name=WP_038272456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851854.1;locus_tag=LPH58_RS02040;product=AMP-binding protein;protein_id=WP_038272456.1;transl_table=11 NZ_CP087690.1 RefSeq gene 518428 519105 . - . ID=gene-LPH58_RS02045;Name=LPH58_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02045;old_locus_tag=LPH58_02045 NZ_CP087690.1 Protein Homology CDS 518428 519105 . - 0 ID=cds-WP_038272433.1;Parent=gene-LPH58_RS02045;Dbxref=Genbank:WP_038272433.1;Name=WP_038272433.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851856.1;locus_tag=LPH58_RS02045;product=ribonuclease HII;protein_id=WP_038272433.1;transl_table=11 NZ_CP087690.1 RefSeq gene 519089 520318 . - . ID=gene-LPH58_RS02050;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LPH58_RS02050;old_locus_tag=LPH58_02050 NZ_CP087690.1 Protein Homology CDS 519089 520318 . - 0 ID=cds-WP_051482370.1;Parent=gene-LPH58_RS02050;Dbxref=Genbank:WP_051482370.1;Name=WP_051482370.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893561.1;locus_tag=LPH58_RS02050;product=lipid-A-disaccharide synthase;protein_id=WP_051482370.1;transl_table=11 NZ_CP087690.1 RefSeq gene 520395 521186 . - . ID=gene-LPH58_RS02055;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LPH58_RS02055;old_locus_tag=LPH58_02055 NZ_CP087690.1 Protein Homology CDS 520395 521186 . - 0 ID=cds-WP_038272431.1;Parent=gene-LPH58_RS02055;Dbxref=Genbank:WP_038272431.1;Name=WP_038272431.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507232.1;locus_tag=LPH58_RS02055;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_038272431.1;transl_table=11 NZ_CP087690.1 RefSeq gene 521208 521690 . - . ID=gene-LPH58_RS02060;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LPH58_RS02060;old_locus_tag=LPH58_02060 NZ_CP087690.1 Protein Homology CDS 521208 521690 . - 0 ID=cds-WP_038272429.1;Parent=gene-LPH58_RS02060;Dbxref=Genbank:WP_038272429.1;Name=WP_038272429.1;Ontology_term=GO:0006633,GO:0016836;gbkey=CDS;gene=fabZ;go_function=hydro-lyase activity|0016836||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085217.1;locus_tag=LPH58_RS02060;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_038272429.1;transl_table=11 NZ_CP087690.1 RefSeq gene 521687 522703 . - . ID=gene-LPH58_RS02065;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LPH58_RS02065;old_locus_tag=LPH58_02065 NZ_CP087690.1 Protein Homology CDS 521687 522703 . - 0 ID=cds-WP_038272427.1;Parent=gene-LPH58_RS02065;Dbxref=Genbank:WP_038272427.1;Name=WP_038272427.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089333.1;locus_tag=LPH58_RS02065;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_038272427.1;transl_table=11 NZ_CP087690.1 RefSeq gene 522902 525256 . - . ID=gene-LPH58_RS02070;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LPH58_RS02070;old_locus_tag=LPH58_02070 NZ_CP087690.1 Protein Homology CDS 522902 525256 . - 0 ID=cds-WP_038272425.1;Parent=gene-LPH58_RS02070;Dbxref=Genbank:WP_038272425.1;Name=WP_038272425.1;Ontology_term=GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117511.1;locus_tag=LPH58_RS02070;product=outer membrane protein assembly factor BamA;protein_id=WP_038272425.1;transl_table=11 NZ_CP087690.1 RefSeq gene 525351 526685 . - . ID=gene-LPH58_RS02075;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LPH58_RS02075;old_locus_tag=LPH58_02075 NZ_CP087690.1 Protein Homology CDS 525351 526685 . - 0 ID=cds-WP_038272423.1;Parent=gene-LPH58_RS02075;Dbxref=Genbank:WP_038272423.1;Name=WP_038272423.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089328.1;locus_tag=LPH58_RS02075;product=RIP metalloprotease RseP;protein_id=WP_038272423.1;transl_table=11 NZ_CP087690.1 RefSeq gene 526716 527900 . - . ID=gene-LPH58_RS02080;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=LPH58_RS02080;old_locus_tag=LPH58_02080 NZ_CP087690.1 Protein Homology CDS 526716 527900 . - 0 ID=cds-WP_038272421.1;Parent=gene-LPH58_RS02080;Dbxref=Genbank:WP_038272421.1;Name=WP_038272421.1;Ontology_term=GO:0019288,GO:0030604,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851863.1;locus_tag=LPH58_RS02080;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_038272421.1;transl_table=11 NZ_CP087690.1 RefSeq gene 527903 528757 . - . ID=gene-LPH58_RS02085;Name=LPH58_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02085;old_locus_tag=LPH58_02085 NZ_CP087690.1 Protein Homology CDS 527903 528757 . - 0 ID=cds-WP_038272419.1;Parent=gene-LPH58_RS02085;Dbxref=Genbank:WP_038272419.1;Name=WP_038272419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258695.1;locus_tag=LPH58_RS02085;product=phosphatidate cytidylyltransferase;protein_id=WP_038272419.1;transl_table=11 NZ_CP087690.1 RefSeq gene 528754 529500 . - . ID=gene-LPH58_RS02090;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LPH58_RS02090;old_locus_tag=LPH58_02090 NZ_CP087690.1 Protein Homology CDS 528754 529500 . - 0 ID=cds-WP_171898071.1;Parent=gene-LPH58_RS02090;Dbxref=Genbank:WP_171898071.1;Name=WP_171898071.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346894.1;locus_tag=LPH58_RS02090;product=polyprenyl diphosphate synthase;protein_id=WP_171898071.1;transl_table=11 NZ_CP087690.1 RefSeq gene 529524 530081 . - . ID=gene-LPH58_RS02095;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LPH58_RS02095;old_locus_tag=LPH58_02095 NZ_CP087690.1 Protein Homology CDS 529524 530081 . - 0 ID=cds-WP_038272416.1;Parent=gene-LPH58_RS02095;Dbxref=Genbank:WP_038272416.1;Name=WP_038272416.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036562.1;locus_tag=LPH58_RS02095;product=ribosome recycling factor;protein_id=WP_038272416.1;transl_table=11 NZ_CP087690.1 RefSeq gene 532014 532163 . + . ID=gene-LPH58_RS02100;Name=LPH58_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02100;old_locus_tag=LPH58_02100 NZ_CP087690.1 GeneMarkS-2+ CDS 532014 532163 . + 0 ID=cds-WP_162814083.1;Parent=gene-LPH58_RS02100;Dbxref=Genbank:WP_162814083.1;Name=WP_162814083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02100;product=hypothetical protein;protein_id=WP_162814083.1;transl_table=11 NZ_CP087690.1 RefSeq gene 533253 534584 . - . ID=gene-LPH58_RS02105;Name=LPH58_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02105;old_locus_tag=LPH58_02105 NZ_CP087690.1 Protein Homology CDS 533253 534584 . - 0 ID=cds-WP_051482394.1;Parent=gene-LPH58_RS02105;Dbxref=Genbank:WP_051482394.1;Name=WP_051482394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851867.1;locus_tag=LPH58_RS02105;product=outer membrane protein transport protein;protein_id=WP_051482394.1;transl_table=11 NZ_CP087690.1 RefSeq gene 534798 535490 . + . ID=gene-LPH58_RS02110;Name=LPH58_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02110;old_locus_tag=LPH58_02110 NZ_CP087690.1 Protein Homology CDS 534798 535490 . + 0 ID=cds-WP_038273064.1;Parent=gene-LPH58_RS02110;Dbxref=Genbank:WP_038273064.1;Name=WP_038273064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301614.1;locus_tag=LPH58_RS02110;product=rhomboid family intramembrane serine protease;protein_id=WP_038273064.1;transl_table=11 NZ_CP087690.1 RefSeq gene 535587 535907 . + . ID=gene-LPH58_RS02115;Name=LPH58_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02115;old_locus_tag=LPH58_02115 NZ_CP087690.1 Protein Homology CDS 535587 535907 . + 0 ID=cds-WP_038273062.1;Parent=gene-LPH58_RS02115;Dbxref=Genbank:WP_038273062.1;Name=WP_038273062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014088873.1;locus_tag=LPH58_RS02115;product=DUF1820 family protein;protein_id=WP_038273062.1;transl_table=11 NZ_CP087690.1 RefSeq gene 536663 537012 . + . ID=gene-LPH58_RS02120;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LPH58_RS02120;old_locus_tag=LPH58_02120 NZ_CP087690.1 cmsearch RNase_P_RNA 536663 537012 . + . ID=rna-LPH58_RS02120;Parent=gene-LPH58_RS02120;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS02120;product=RNase P RNA component class A NZ_CP087690.1 cmsearch exon 536663 537012 . + . ID=exon-LPH58_RS02120-1;Parent=rna-LPH58_RS02120;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS02120;product=RNase P RNA component class A NZ_CP087690.1 RefSeq gene 537466 538266 . - . ID=gene-LPH58_RS02125;Name=LPH58_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02125;old_locus_tag=LPH58_02125 NZ_CP087690.1 Protein Homology CDS 537466 538266 . - 0 ID=cds-WP_038273060.1;Parent=gene-LPH58_RS02125;Dbxref=Genbank:WP_038273060.1;Name=WP_038273060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806608.1;locus_tag=LPH58_RS02125;product=ferritin-like domain-containing protein;protein_id=WP_038273060.1;transl_table=11 NZ_CP087690.1 RefSeq gene 539131 539862 . - . ID=gene-LPH58_RS02130;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LPH58_RS02130;old_locus_tag=LPH58_02130 NZ_CP087690.1 Protein Homology CDS 539131 539862 . - 0 ID=cds-WP_038271995.1;Parent=gene-LPH58_RS02130;Dbxref=Genbank:WP_038271995.1;Name=WP_038271995.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851871.1;locus_tag=LPH58_RS02130;product=UMP kinase;protein_id=WP_038271995.1;transl_table=11 NZ_CP087690.1 RefSeq gene 541607 541786 . - . ID=gene-LPH58_RS02135;Name=LPH58_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02135;old_locus_tag=LPH58_02135 NZ_CP087690.1 GeneMarkS-2+ CDS 541607 541786 . - 0 ID=cds-WP_160165204.1;Parent=gene-LPH58_RS02135;Dbxref=Genbank:WP_160165204.1;Name=WP_160165204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02135;product=hypothetical protein;protein_id=WP_160165204.1;transl_table=11 NZ_CP087690.1 RefSeq gene 542006 542239 . + . ID=gene-LPH58_RS02140;Name=LPH58_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02140;old_locus_tag=LPH58_02140 NZ_CP087690.1 GeneMarkS-2+ CDS 542006 542239 . + 0 ID=cds-WP_038271999.1;Parent=gene-LPH58_RS02140;Dbxref=Genbank:WP_038271999.1;Name=WP_038271999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02140;product=hypothetical protein;protein_id=WP_038271999.1;transl_table=11 NZ_CP087690.1 RefSeq gene 542569 543030 . - . ID=gene-LPH58_RS02145;Name=LPH58_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02145;old_locus_tag=LPH58_02145 NZ_CP087690.1 Protein Homology CDS 542569 543030 . - 0 ID=cds-WP_069636215.1;Parent=gene-LPH58_RS02145;Dbxref=Genbank:WP_069636215.1;Name=WP_069636215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024949.2;locus_tag=LPH58_RS02145;product=helix-turn-helix transcriptional regulator;protein_id=WP_069636215.1;transl_table=11 NZ_CP087690.1 RefSeq gene 543091 543306 . + . ID=gene-LPH58_RS02150;Name=LPH58_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02150;old_locus_tag=LPH58_02150 NZ_CP087690.1 Protein Homology CDS 543091 543306 . + 0 ID=cds-WP_038272001.1;Parent=gene-LPH58_RS02150;Dbxref=Genbank:WP_038272001.1;Name=WP_038272001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922212.1;locus_tag=LPH58_RS02150;product=hypothetical protein;protein_id=WP_038272001.1;transl_table=11 NZ_CP087690.1 RefSeq gene 543563 543898 . + . ID=gene-LPH58_RS02155;Name=LPH58_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02155;old_locus_tag=LPH58_02155 NZ_CP087690.1 GeneMarkS-2+ CDS 543563 543898 . + 0 ID=cds-WP_038272003.1;Parent=gene-LPH58_RS02155;Dbxref=Genbank:WP_038272003.1;Name=WP_038272003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02155;product=hypothetical protein;protein_id=WP_038272003.1;transl_table=11 NZ_CP087690.1 RefSeq gene 543990 544505 . + . ID=gene-LPH58_RS02160;Name=LPH58_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02160;old_locus_tag=LPH58_02160 NZ_CP087690.1 GeneMarkS-2+ CDS 543990 544505 . + 0 ID=cds-WP_038272005.1;Parent=gene-LPH58_RS02160;Dbxref=Genbank:WP_038272005.1;Name=WP_038272005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02160;product=hypothetical protein;protein_id=WP_038272005.1;transl_table=11 NZ_CP087690.1 RefSeq gene 544507 546012 . + . ID=gene-LPH58_RS02165;Name=LPH58_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02165;old_locus_tag=LPH58_02165 NZ_CP087690.1 GeneMarkS-2+ CDS 544507 546012 . + 0 ID=cds-WP_038272007.1;Parent=gene-LPH58_RS02165;Dbxref=Genbank:WP_038272007.1;Name=WP_038272007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02165;product=hypothetical protein;protein_id=WP_038272007.1;transl_table=11 NZ_CP087690.1 RefSeq gene 546272 546706 . + . ID=gene-LPH58_RS02170;Name=LPH58_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02170;old_locus_tag=LPH58_02170 NZ_CP087690.1 GeneMarkS-2+ CDS 546272 546706 . + 0 ID=cds-WP_038272009.1;Parent=gene-LPH58_RS02170;Dbxref=Genbank:WP_038272009.1;Name=WP_038272009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02170;product=hypothetical protein;protein_id=WP_038272009.1;transl_table=11 NZ_CP087690.1 RefSeq gene 546699 546875 . + . ID=gene-LPH58_RS02175;Name=LPH58_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02175;old_locus_tag=LPH58_02175 NZ_CP087690.1 Protein Homology CDS 546699 546875 . + 0 ID=cds-WP_171898044.1;Parent=gene-LPH58_RS02175;Dbxref=Genbank:WP_171898044.1;Name=WP_171898044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005922230.1;locus_tag=LPH58_RS02175;product=hypothetical protein;protein_id=WP_171898044.1;transl_table=11 NZ_CP087690.1 RefSeq gene 546868 547128 . + . ID=gene-LPH58_RS02180;Name=LPH58_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02180;old_locus_tag=LPH58_02180 NZ_CP087690.1 GeneMarkS-2+ CDS 546868 547128 . + 0 ID=cds-WP_038272011.1;Parent=gene-LPH58_RS02180;Dbxref=Genbank:WP_038272011.1;Name=WP_038272011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02180;product=hypothetical protein;protein_id=WP_038272011.1;transl_table=11 NZ_CP087690.1 RefSeq gene 547128 547496 . + . ID=gene-LPH58_RS02185;Name=LPH58_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02185;old_locus_tag=LPH58_02185 NZ_CP087690.1 Protein Homology CDS 547128 547496 . + 0 ID=cds-WP_230428159.1;Parent=gene-LPH58_RS02185;Dbxref=Genbank:WP_230428159.1;Name=WP_230428159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004636902.1;locus_tag=LPH58_RS02185;product=hypothetical protein;protein_id=WP_230428159.1;transl_table=11 NZ_CP087690.1 RefSeq gene 548416 548502 . - . ID=gene-LPH58_RS02190;Name=LPH58_RS02190;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02190;old_locus_tag=LPH58_02190 NZ_CP087690.1 tRNAscan-SE tRNA 548416 548502 . - . ID=rna-LPH58_RS02190;Parent=gene-LPH58_RS02190;anticodon=(pos:complement(548466..548468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02190;product=tRNA-Leu NZ_CP087690.1 tRNAscan-SE exon 548416 548502 . - . ID=exon-LPH58_RS02190-1;Parent=rna-LPH58_RS02190;anticodon=(pos:complement(548466..548468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02190;product=tRNA-Leu NZ_CP087690.1 RefSeq gene 548627 548702 . - . ID=gene-LPH58_RS02195;Name=LPH58_RS02195;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02195;old_locus_tag=LPH58_02195 NZ_CP087690.1 tRNAscan-SE tRNA 548627 548702 . - . ID=rna-LPH58_RS02195;Parent=gene-LPH58_RS02195;anticodon=(pos:complement(548666..548668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02195;product=tRNA-Glu NZ_CP087690.1 tRNAscan-SE exon 548627 548702 . - . ID=exon-LPH58_RS02195-1;Parent=rna-LPH58_RS02195;anticodon=(pos:complement(548666..548668));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02195;product=tRNA-Glu NZ_CP087690.1 RefSeq gene 548756 548831 . - . ID=gene-LPH58_RS02200;Name=LPH58_RS02200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02200;old_locus_tag=LPH58_02200 NZ_CP087690.1 tRNAscan-SE tRNA 548756 548831 . - . ID=rna-LPH58_RS02200;Parent=gene-LPH58_RS02200;anticodon=(pos:complement(548796..548798));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02200;product=tRNA-Ala NZ_CP087690.1 tRNAscan-SE exon 548756 548831 . - . ID=exon-LPH58_RS02200-1;Parent=rna-LPH58_RS02200;anticodon=(pos:complement(548796..548798));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02200;product=tRNA-Ala NZ_CP087690.1 RefSeq gene 549870 550529 . - . ID=gene-LPH58_RS02205;Name=LPH58_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02205;old_locus_tag=LPH58_02205 NZ_CP087690.1 Protein Homology CDS 549870 550529 . - 0 ID=cds-WP_038272015.1;Parent=gene-LPH58_RS02205;Dbxref=Genbank:WP_038272015.1;Name=WP_038272015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355957.1;locus_tag=LPH58_RS02205;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_038272015.1;transl_table=11 NZ_CP087690.1 RefSeq gene 550621 552537 . - . ID=gene-LPH58_RS02210;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LPH58_RS02210;old_locus_tag=LPH58_02210 NZ_CP087690.1 Protein Homology CDS 550621 552537 . - 0 ID=cds-WP_038272017.1;Parent=gene-LPH58_RS02210;Dbxref=Genbank:WP_038272017.1;Name=WP_038272017.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085203.1;locus_tag=LPH58_RS02210;product=phosphogluconate dehydratase;protein_id=WP_038272017.1;transl_table=11 NZ_CP087690.1 RefSeq gene 552684 553403 . - . ID=gene-LPH58_RS02215;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LPH58_RS02215;old_locus_tag=LPH58_02215 NZ_CP087690.1 Protein Homology CDS 552684 553403 . - 0 ID=cds-WP_038272018.1;Parent=gene-LPH58_RS02215;Dbxref=Genbank:WP_038272018.1;Name=WP_038272018.1;Ontology_term=GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090237.1;locus_tag=LPH58_RS02215;product=6-phosphogluconolactonase;protein_id=WP_038272018.1;transl_table=11 NZ_CP087690.1 RefSeq gene 553400 554413 . - . ID=gene-LPH58_RS02220;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=LPH58_RS02220;old_locus_tag=LPH58_02220 NZ_CP087690.1 Protein Homology CDS 553400 554413 . - 0 ID=cds-WP_038272019.1;Parent=gene-LPH58_RS02220;Dbxref=Genbank:WP_038272019.1;Name=WP_038272019.1;Ontology_term=GO:0005975,GO:0004340;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085201.1;locus_tag=LPH58_RS02220;product=glucokinase;protein_id=WP_038272019.1;transl_table=11 NZ_CP087690.1 RefSeq gene 554410 555885 . - . ID=gene-LPH58_RS02225;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LPH58_RS02225;old_locus_tag=LPH58_02225 NZ_CP087690.1 Protein Homology CDS 554410 555885 . - 0 ID=cds-WP_230428273.1;Parent=gene-LPH58_RS02225;Dbxref=Genbank:WP_230428273.1;Name=WP_230428273.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090238.1;locus_tag=LPH58_RS02225;product=glucose-6-phosphate dehydrogenase;protein_id=WP_230428273.1;transl_table=11 NZ_CP087690.1 RefSeq gene 556207 557301 . + . ID=gene-LPH58_RS02230;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LPH58_RS02230;old_locus_tag=LPH58_02230 NZ_CP087690.1 Protein Homology CDS 556207 557301 . + 0 ID=cds-WP_038272021.1;Parent=gene-LPH58_RS02230;Dbxref=Genbank:WP_038272021.1;Name=WP_038272021.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337631.1;locus_tag=LPH58_RS02230;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_038272021.1;transl_table=11 NZ_CP087690.1 RefSeq gene 557452 558312 . - . ID=gene-LPH58_RS02235;Name=LPH58_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02235;old_locus_tag=LPH58_02235 NZ_CP087690.1 Protein Homology CDS 557452 558312 . - 0 ID=cds-WP_230428160.1;Parent=gene-LPH58_RS02235;Dbxref=Genbank:WP_230428160.1;Name=WP_230428160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355963.1;locus_tag=LPH58_RS02235;product=folate-binding protein;protein_id=WP_230428160.1;transl_table=11 NZ_CP087690.1 RefSeq gene 558670 558771 . + . ID=gene-LPH58_RS02240;Name=LPH58_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02240;old_locus_tag=LPH58_02240 NZ_CP087690.1 Protein Homology CDS 558670 558771 . + 0 ID=cds-WP_230428161.1;Parent=gene-LPH58_RS02240;Dbxref=Genbank:WP_230428161.1;Name=WP_230428161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019511.2;locus_tag=LPH58_RS02240;product=DUF1674 domain-containing protein;protein_id=WP_230428161.1;transl_table=11 NZ_CP087690.1 RefSeq gene 558829 559224 . + . ID=gene-LPH58_RS02245;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LPH58_RS02245;old_locus_tag=LPH58_02245 NZ_CP087690.1 Protein Homology CDS 558829 559224 . + 0 ID=cds-WP_081755467.1;Parent=gene-LPH58_RS02245;Dbxref=Genbank:WP_081755467.1;Name=WP_081755467.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhC;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089288.1;locus_tag=LPH58_RS02245;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_081755467.1;transl_table=11 NZ_CP087690.1 RefSeq gene 559221 559604 . + . ID=gene-LPH58_RS02250;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LPH58_RS02250;old_locus_tag=LPH58_02250 NZ_CP087690.1 Protein Homology CDS 559221 559604 . + 0 ID=cds-WP_038272022.1;Parent=gene-LPH58_RS02250;Dbxref=Genbank:WP_038272022.1;Name=WP_038272022.1;Ontology_term=GO:0006099,GO:0000104,GO:0045282;gbkey=CDS;gene=sdhD;go_component=plasma membrane succinate dehydrogenase complex|0045282||IEA;go_function=succinate dehydrogenase activity|0000104||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893590.1;locus_tag=LPH58_RS02250;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_038272022.1;transl_table=11 NZ_CP087690.1 RefSeq gene 559612 561402 . + . ID=gene-LPH58_RS02255;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LPH58_RS02255;old_locus_tag=LPH58_02255 NZ_CP087690.1 Protein Homology CDS 559612 561402 . + 0 ID=cds-WP_038272023.1;Parent=gene-LPH58_RS02255;Dbxref=Genbank:WP_038272023.1;Name=WP_038272023.1;Ontology_term=GO:0006099,GO:0022900,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851880.1;locus_tag=LPH58_RS02255;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_038272023.1;transl_table=11 NZ_CP087690.1 RefSeq gene 561423 562208 . + . ID=gene-LPH58_RS02260;Name=LPH58_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02260;old_locus_tag=LPH58_02260 NZ_CP087690.1 Protein Homology CDS 561423 562208 . + 0 ID=cds-WP_038272024.1;Parent=gene-LPH58_RS02260;Dbxref=Genbank:WP_038272024.1;Name=WP_038272024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037280.1;locus_tag=LPH58_RS02260;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_038272024.1;transl_table=11 NZ_CP087690.1 RefSeq gene 562329 562577 . + . ID=gene-LPH58_RS02265;Name=LPH58_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02265;old_locus_tag=LPH58_02265 NZ_CP087690.1 Protein Homology CDS 562329 562577 . + 0 ID=cds-WP_038272025.1;Parent=gene-LPH58_RS02265;Dbxref=Genbank:WP_038272025.1;Name=WP_038272025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802215.1;locus_tag=LPH58_RS02265;product=succinate dehydrogenase assembly factor 2;protein_id=WP_038272025.1;transl_table=11 NZ_CP087690.1 RefSeq gene 562528 562980 . + . ID=gene-LPH58_RS02270;Name=LPH58_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02270;old_locus_tag=LPH58_02270 NZ_CP087690.1 Protein Homology CDS 562528 562980 . + 0 ID=cds-WP_230428497.1;Parent=gene-LPH58_RS02270;Dbxref=Genbank:WP_230428497.1;Name=WP_230428497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085193.1;locus_tag=LPH58_RS02270;product=hypothetical protein;protein_id=WP_230428497.1;transl_table=11 NZ_CP087690.1 RefSeq gene 563005 564246 . + . ID=gene-LPH58_RS02275;Name=LPH58_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02275;old_locus_tag=LPH58_02275 NZ_CP087690.1 Protein Homology CDS 563005 564246 . + 0 ID=cds-WP_038272028.1;Parent=gene-LPH58_RS02275;Dbxref=Genbank:WP_038272028.1;Name=WP_038272028.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902586.1;locus_tag=LPH58_RS02275;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_038272028.1;transl_table=11 NZ_CP087690.1 RefSeq gene 564239 564961 . + . ID=gene-LPH58_RS02280;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LPH58_RS02280;old_locus_tag=LPH58_02280 NZ_CP087690.1 Protein Homology CDS 564239 564961 . + 0 ID=cds-WP_038272030.1;Parent=gene-LPH58_RS02280;Dbxref=Genbank:WP_038272030.1;Name=WP_038272030.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089270.1;locus_tag=LPH58_RS02280;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_038272030.1;transl_table=11 NZ_CP087690.1 RefSeq gene 565543 567942 . + . ID=gene-LPH58_RS02285;Name=LPH58_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02285;old_locus_tag=LPH58_02285 NZ_CP087690.1 Protein Homology CDS 565543 567942 . + 0 ID=cds-WP_230428274.1;Parent=gene-LPH58_RS02285;Dbxref=Genbank:WP_230428274.1;Name=WP_230428274.1;Ontology_term=GO:0009290,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851884.1;locus_tag=LPH58_RS02285;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_230428274.1;transl_table=11 NZ_CP087690.1 RefSeq gene 567927 568592 . + . ID=gene-LPH58_RS02290;Name=LPH58_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02290;old_locus_tag=LPH58_02290 NZ_CP087690.1 Protein Homology CDS 567927 568592 . + 0 ID=cds-WP_038272035.1;Parent=gene-LPH58_RS02290;Dbxref=Genbank:WP_038272035.1;Name=WP_038272035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085189.1;locus_tag=LPH58_RS02290;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_038272035.1;transl_table=11 NZ_CP087690.1 RefSeq gene 568597 569034 . + . ID=gene-LPH58_RS02295;Name=LPH58_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02295;old_locus_tag=LPH58_02295 NZ_CP087690.1 Protein Homology CDS 568597 569034 . + 0 ID=cds-WP_038272037.1;Parent=gene-LPH58_RS02295;Dbxref=Genbank:WP_038272037.1;Name=WP_038272037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237622.1;locus_tag=LPH58_RS02295;product=biopolymer transporter ExbD;protein_id=WP_038272037.1;transl_table=11 NZ_CP087690.1 RefSeq gene 569052 570800 . + . ID=gene-LPH58_RS02300;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LPH58_RS02300;old_locus_tag=LPH58_02300 NZ_CP087690.1 Protein Homology CDS 569052 570800 . + 0 ID=cds-WP_038272039.1;Parent=gene-LPH58_RS02300;Dbxref=Genbank:WP_038272039.1;Name=WP_038272039.1;Ontology_term=GO:0006869,GO:0005319;gbkey=CDS;gene=msbA;go_function=lipid transporter activity|0005319||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851886.1;locus_tag=LPH58_RS02300;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_038272039.1;transl_table=11 NZ_CP087690.1 RefSeq gene 570797 571816 . + . ID=gene-LPH58_RS02305;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LPH58_RS02305;old_locus_tag=LPH58_02305 NZ_CP087690.1 Protein Homology CDS 570797 571816 . + 0 ID=cds-WP_038272041.1;Parent=gene-LPH58_RS02305;Dbxref=Genbank:WP_038272041.1;Name=WP_038272041.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085186.1;locus_tag=LPH58_RS02305;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_038272041.1;transl_table=11 NZ_CP087690.1 RefSeq gene 573140 573772 . + . ID=gene-LPH58_RS02310;Name=LPH58_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02310;old_locus_tag=LPH58_02310 NZ_CP087690.1 Protein Homology CDS 573140 573772 . + 0 ID=cds-WP_038272043.1;Parent=gene-LPH58_RS02310;Dbxref=Genbank:WP_038272043.1;Name=WP_038272043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850972.1;locus_tag=LPH58_RS02310;product=ParA family protein;protein_id=WP_038272043.1;transl_table=11 NZ_CP087690.1 RefSeq gene 573792 574268 . + . ID=gene-LPH58_RS02315;Name=LPH58_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02315;old_locus_tag=LPH58_02315 NZ_CP087690.1 Protein Homology CDS 573792 574268 . + 0 ID=cds-WP_038272079.1;Parent=gene-LPH58_RS02315;Dbxref=Genbank:WP_038272079.1;Name=WP_038272079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035432.1;locus_tag=LPH58_RS02315;product=histidine phosphatase family protein;protein_id=WP_038272079.1;transl_table=11 NZ_CP087690.1 RefSeq gene 574273 574845 . + . ID=gene-LPH58_RS02320;Name=LPH58_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02320;old_locus_tag=LPH58_02320 NZ_CP087690.1 Protein Homology CDS 574273 574845 . + 0 ID=cds-WP_051482358.1;Parent=gene-LPH58_RS02320;Dbxref=Genbank:WP_051482358.1;Name=WP_051482358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017355481.1;locus_tag=LPH58_RS02320;product=YceI family protein;protein_id=WP_051482358.1;transl_table=11 NZ_CP087690.1 RefSeq gene 574842 576794 . + . ID=gene-LPH58_RS02325;Name=LPH58_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02325;old_locus_tag=LPH58_02325 NZ_CP087690.1 Protein Homology CDS 574842 576794 . + 0 ID=cds-WP_038272045.1;Parent=gene-LPH58_RS02325;Dbxref=Genbank:WP_038272045.1;Name=WP_038272045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097628.1;locus_tag=LPH58_RS02325;product=phospholipase D family protein;protein_id=WP_038272045.1;transl_table=11 NZ_CP087690.1 RefSeq gene 577351 577776 . + . ID=gene-LPH58_RS02330;Name=LPH58_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02330;old_locus_tag=LPH58_02330 NZ_CP087690.1 Protein Homology CDS 577351 577776 . + 0 ID=cds-WP_200866205.1;Parent=gene-LPH58_RS02330;Dbxref=Genbank:WP_200866205.1;Name=WP_200866205.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016246.2;locus_tag=LPH58_RS02330;product=DUF488 domain-containing protein;protein_id=WP_200866205.1;transl_table=11 NZ_CP087690.1 RefSeq gene 577733 578170 . - . ID=gene-LPH58_RS02335;Name=LPH58_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02335;old_locus_tag=LPH58_02335 NZ_CP087690.1 GeneMarkS-2+ CDS 577733 578170 . - 0 ID=cds-WP_201745823.1;Parent=gene-LPH58_RS02335;Dbxref=Genbank:WP_201745823.1;Name=WP_201745823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02335;product=hypothetical protein;protein_id=WP_201745823.1;transl_table=11 NZ_CP087690.1 RefSeq gene 578264 578419 . - . ID=gene-LPH58_RS02340;Name=LPH58_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02340;old_locus_tag=LPH58_02340 NZ_CP087690.1 GeneMarkS-2+ CDS 578264 578419 . - 0 ID=cds-WP_200866207.1;Parent=gene-LPH58_RS02340;Dbxref=Genbank:WP_200866207.1;Name=WP_200866207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02340;product=hypothetical protein;protein_id=WP_200866207.1;transl_table=11 NZ_CP087690.1 RefSeq gene 578682 579167 . - . ID=gene-LPH58_RS02345;Name=LPH58_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02345;old_locus_tag=LPH58_02345 NZ_CP087690.1 Protein Homology CDS 578682 579167 . - 0 ID=cds-WP_038272048.1;Parent=gene-LPH58_RS02345;Dbxref=Genbank:WP_038272048.1;Name=WP_038272048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488754.1;locus_tag=LPH58_RS02345;product=asparaginase domain-containing protein;protein_id=WP_038272048.1;transl_table=11 NZ_CP087690.1 RefSeq gene 579241 579840 . - . ID=gene-LPH58_RS02350;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LPH58_RS02350;old_locus_tag=LPH58_02350 NZ_CP087690.1 Protein Homology CDS 579241 579840 . - 0 ID=cds-WP_038272050.1;Parent=gene-LPH58_RS02350;Dbxref=Genbank:WP_038272050.1;Name=WP_038272050.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893611.1;locus_tag=LPH58_RS02350;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_038272050.1;transl_table=11 NZ_CP087690.1 RefSeq gene 580678 581856 . + . ID=gene-LPH58_RS02355;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LPH58_RS02355;old_locus_tag=LPH58_02355 NZ_CP087690.1 Protein Homology CDS 580678 581856 . + 0 ID=cds-WP_038272082.1;Parent=gene-LPH58_RS02355;Dbxref=Genbank:WP_038272082.1;Name=WP_038272082.1;Ontology_term=GO:0019358,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=nicotinate nucleotide salvage|0019358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472474.1;locus_tag=LPH58_RS02355;product=nicotinate phosphoribosyltransferase;protein_id=WP_038272082.1;transl_table=11 NZ_CP087690.1 RefSeq gene 583124 583702 . - . ID=gene-LPH58_RS02360;Name=LPH58_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02360;old_locus_tag=LPH58_02360 NZ_CP087690.1 Protein Homology CDS 583124 583702 . - 0 ID=cds-WP_038272053.1;Parent=gene-LPH58_RS02360;Dbxref=Genbank:WP_038272053.1;Name=WP_038272053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893616.1;locus_tag=LPH58_RS02360;product=phosphoesterase;protein_id=WP_038272053.1;transl_table=11 NZ_CP087690.1 RefSeq gene 584270 584410 . - . ID=gene-LPH58_RS02365;Name=LPH58_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02365;old_locus_tag=LPH58_02365 NZ_CP087690.1 Protein Homology CDS 584270 584410 . - 0 ID=cds-WP_230428163.1;Parent=gene-LPH58_RS02365;Dbxref=Genbank:WP_230428163.1;Name=WP_230428163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024671.2;locus_tag=LPH58_RS02365;product=DUF4065 domain-containing protein;protein_id=WP_230428163.1;transl_table=11 NZ_CP087690.1 RefSeq gene 585695 586258 . - . ID=gene-LPH58_RS02370;Name=LPH58_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02370;old_locus_tag=LPH58_02370 NZ_CP087690.1 Protein Homology CDS 585695 586258 . - 0 ID=cds-WP_038272055.1;Parent=gene-LPH58_RS02370;Dbxref=Genbank:WP_038272055.1;Name=WP_038272055.1;Ontology_term=GO:0003725;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005921907.1;locus_tag=LPH58_RS02370;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=WP_038272055.1;transl_table=11 NZ_CP087690.1 RefSeq gene 586393 588828 . - . ID=gene-LPH58_RS02375;Name=LPH58_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02375;old_locus_tag=LPH58_02375 NZ_CP087690.1 Protein Homology CDS 586393 588828 . - 0 ID=cds-WP_038272057.1;Parent=gene-LPH58_RS02375;Dbxref=Genbank:WP_038272057.1;Name=WP_038272057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089635.1;locus_tag=LPH58_RS02375;product=DNA topoisomerase I;protein_id=WP_038272057.1;transl_table=11 NZ_CP087690.1 RefSeq gene 589108 589416 . - . ID=gene-LPH58_RS02380;Name=LPH58_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02380;old_locus_tag=LPH58_02380 NZ_CP087690.1 GeneMarkS-2+ CDS 589108 589416 . - 0 ID=cds-WP_038272058.1;Parent=gene-LPH58_RS02380;Dbxref=Genbank:WP_038272058.1;Name=WP_038272058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02380;product=RDD family protein;protein_id=WP_038272058.1;transl_table=11 NZ_CP087690.1 RefSeq gene 590237 590710 . - . ID=gene-LPH58_RS02385;Name=LPH58_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02385;old_locus_tag=LPH58_02385 NZ_CP087690.1 Protein Homology CDS 590237 590710 . - 0 ID=cds-WP_038272059.1;Parent=gene-LPH58_RS02385;Dbxref=Genbank:WP_038272059.1;Name=WP_038272059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159357.1;locus_tag=LPH58_RS02385;product=DUF494 family protein;protein_id=WP_038272059.1;transl_table=11 NZ_CP087690.1 RefSeq gene 590756 591895 . - . ID=gene-LPH58_RS02390;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LPH58_RS02390;old_locus_tag=LPH58_02390 NZ_CP087690.1 Protein Homology CDS 590756 591895 . - 0 ID=cds-WP_038272084.1;Parent=gene-LPH58_RS02390;Dbxref=Genbank:WP_038272084.1;Name=WP_038272084.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851583.1;locus_tag=LPH58_RS02390;product=DNA-processing protein DprA;protein_id=WP_038272084.1;transl_table=11 NZ_CP087690.1 RefSeq gene 591990 593150 . - . ID=gene-LPH58_RS02395;Name=LPH58_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02395;old_locus_tag=LPH58_02395 NZ_CP087690.1 Protein Homology CDS 591990 593150 . - 0 ID=cds-WP_038272062.1;Parent=gene-LPH58_RS02395;Dbxref=Genbank:WP_038272062.1;Name=WP_038272062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851584.1;locus_tag=LPH58_RS02395;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_038272062.1;transl_table=11 NZ_CP087690.1 RefSeq gene 593289 593801 . + . ID=gene-LPH58_RS02400;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LPH58_RS02400;old_locus_tag=LPH58_02400 NZ_CP087690.1 Protein Homology CDS 593289 593801 . + 0 ID=cds-WP_038272064.1;Parent=gene-LPH58_RS02400;Dbxref=Genbank:WP_038272064.1;Name=WP_038272064.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911379.1;locus_tag=LPH58_RS02400;product=peptide deformylase;protein_id=WP_038272064.1;transl_table=11 NZ_CP087690.1 RefSeq gene 593907 594830 . + . ID=gene-LPH58_RS02405;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LPH58_RS02405;old_locus_tag=LPH58_02405 NZ_CP087690.1 Protein Homology CDS 593907 594830 . + 0 ID=cds-WP_038272066.1;Parent=gene-LPH58_RS02405;Dbxref=Genbank:WP_038272066.1;Name=WP_038272066.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851586.1;locus_tag=LPH58_RS02405;product=methionyl-tRNA formyltransferase;protein_id=WP_038272066.1;transl_table=11 NZ_CP087690.1 RefSeq gene 594827 596116 . + . ID=gene-LPH58_RS02410;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LPH58_RS02410;old_locus_tag=LPH58_02410 NZ_CP087690.1 Protein Homology CDS 594827 596116 . + 0 ID=cds-WP_038272068.1;Parent=gene-LPH58_RS02410;Dbxref=Genbank:WP_038272068.1;Name=WP_038272068.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849283.1;locus_tag=LPH58_RS02410;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_038272068.1;transl_table=11 NZ_CP087690.1 RefSeq gene 596149 597864 . + . ID=gene-LPH58_RS02415;Name=LPH58_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02415;old_locus_tag=LPH58_02415 NZ_CP087690.1 Protein Homology CDS 596149 597864 . + 0 ID=cds-WP_038272070.1;Parent=gene-LPH58_RS02415;Dbxref=Genbank:WP_038272070.1;Name=WP_038272070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091215.1;locus_tag=LPH58_RS02415;product=glycosyltransferase family 39 protein;protein_id=WP_038272070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 598426 599487 . - . ID=gene-LPH58_RS02420;Name=LPH58_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02420;old_locus_tag=LPH58_02420 NZ_CP087690.1 Protein Homology CDS 598426 599487 . - 0 ID=cds-WP_038273275.1;Parent=gene-LPH58_RS02420;Dbxref=Genbank:WP_038273275.1;Name=WP_038273275.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852652.1;locus_tag=LPH58_RS02420;product=tyrosine-type recombinase/integrase;protein_id=WP_038273275.1;transl_table=11 NZ_CP087690.1 RefSeq gene 599500 599736 . - . ID=gene-LPH58_RS02425;Name=LPH58_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02425;old_locus_tag=LPH58_02425 NZ_CP087690.1 Protein Homology CDS 599500 599736 . - 0 ID=cds-WP_069636229.1;Parent=gene-LPH58_RS02425;Dbxref=Genbank:WP_069636229.1;Name=WP_069636229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852651.1;locus_tag=LPH58_RS02425;product=DUF4224 domain-containing protein;protein_id=WP_069636229.1;transl_table=11 NZ_CP087690.1 RefSeq gene 599787 600323 . - . ID=gene-LPH58_RS02430;Name=LPH58_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02430;old_locus_tag=LPH58_02430 NZ_CP087690.1 Protein Homology CDS 599787 600323 . - 0 ID=cds-WP_038273354.1;Parent=gene-LPH58_RS02430;Dbxref=Genbank:WP_038273354.1;Name=WP_038273354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH58_RS02430;product=pilin;protein_id=WP_038273354.1;transl_table=11 NZ_CP087690.1 RefSeq gene 600320 601705 . - . ID=gene-LPH58_RS02435;Name=LPH58_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02435;old_locus_tag=LPH58_02435 NZ_CP087690.1 Protein Homology CDS 600320 601705 . - 0 ID=cds-WP_114867068.1;Parent=gene-LPH58_RS02435;Dbxref=Genbank:WP_114867068.1;Name=WP_114867068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085030.1;locus_tag=LPH58_RS02435;product=DEAD/DEAH box helicase;protein_id=WP_114867068.1;transl_table=11 NZ_CP087690.1 RefSeq gene 601781 602086 . + . ID=gene-LPH58_RS02440;Name=LPH58_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02440;old_locus_tag=LPH58_02440 NZ_CP087690.1 Protein Homology CDS 601781 602086 . + 0 ID=cds-WP_114867069.1;Parent=gene-LPH58_RS02440;Dbxref=Genbank:WP_114867069.1;Name=WP_114867069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851619.1;locus_tag=LPH58_RS02440;product=DUF1640 domain-containing protein;protein_id=WP_114867069.1;transl_table=11 NZ_CP087690.1 RefSeq gene 602088 602360 . - . ID=gene-LPH58_RS02445;Name=LPH58_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02445;old_locus_tag=LPH58_02445 NZ_CP087690.1 Protein Homology CDS 602088 602360 . - 0 ID=cds-WP_114867070.1;Parent=gene-LPH58_RS02445;Dbxref=Genbank:WP_114867070.1;Name=WP_114867070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382732.1;locus_tag=LPH58_RS02445;product=VRR-NUC domain-containing protein;protein_id=WP_114867070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 602364 602663 . - . ID=gene-LPH58_RS02450;Name=LPH58_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02450;old_locus_tag=LPH58_02450 NZ_CP087690.1 GeneMarkS-2+ CDS 602364 602663 . - 0 ID=cds-WP_051482410.1;Parent=gene-LPH58_RS02450;Dbxref=Genbank:WP_051482410.1;Name=WP_051482410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02450;product=hypothetical protein;protein_id=WP_051482410.1;transl_table=11 NZ_CP087690.1 RefSeq gene 602687 603040 . - . ID=gene-LPH58_RS02455;Name=LPH58_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02455;old_locus_tag=LPH58_02455 NZ_CP087690.1 Protein Homology CDS 602687 603040 . - 0 ID=cds-WP_081755417.1;Parent=gene-LPH58_RS02455;Dbxref=Genbank:WP_081755417.1;Name=WP_081755417.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022444.2;locus_tag=LPH58_RS02455;product=DUF2815 family protein;protein_id=WP_081755417.1;transl_table=11 NZ_CP087690.1 RefSeq gene 603037 604314 . - . ID=gene-LPH58_RS02460;Name=LPH58_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02460;old_locus_tag=LPH58_02460 NZ_CP087690.1 Protein Homology CDS 603037 604314 . - 0 ID=cds-WP_038270871.1;Parent=gene-LPH58_RS02460;Dbxref=Genbank:WP_038270871.1;Name=WP_038270871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894945.1;locus_tag=LPH58_RS02460;product=DUF2800 domain-containing protein;protein_id=WP_038270871.1;transl_table=11 NZ_CP087690.1 RefSeq gene 604311 604541 . - . ID=gene-LPH58_RS02465;Name=LPH58_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02465;old_locus_tag=LPH58_02465 NZ_CP087690.1 GeneMarkS-2+ CDS 604311 604541 . - 0 ID=cds-WP_038270872.1;Parent=gene-LPH58_RS02465;Dbxref=Genbank:WP_038270872.1;Name=WP_038270872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02465;product=hypothetical protein;protein_id=WP_038270872.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 604547 605199 . + . ID=gene-LPH58_RS02470;Name=LPH58_RS02470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS02470;old_locus_tag=LPH58_02470;partial=true;pseudo=true;start_range=.,604547 NZ_CP087690.1 Protein Homology CDS 604547 605199 . + 0 ID=cds-LPH58_RS02470;Parent=gene-LPH58_RS02470;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003156775.1;locus_tag=LPH58_RS02470;partial=true;product=sodium-independent anion transporter;pseudo=true;start_range=.,604547;transl_table=11 NZ_CP087690.1 RefSeq gene 605364 605903 . + . ID=gene-LPH58_RS02475;Name=LPH58_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02475;old_locus_tag=LPH58_02475 NZ_CP087690.1 GeneMarkS-2+ CDS 605364 605903 . + 0 ID=cds-WP_152536598.1;Parent=gene-LPH58_RS02475;Dbxref=Genbank:WP_152536598.1;Name=WP_152536598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02475;product=hypothetical protein;protein_id=WP_152536598.1;transl_table=11 NZ_CP087690.1 RefSeq gene 606202 607320 . + . ID=gene-LPH58_RS02480;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=LPH58_RS02480;old_locus_tag=LPH58_02480 NZ_CP087690.1 Protein Homology CDS 606202 607320 . + 0 ID=cds-WP_114867072.1;Parent=gene-LPH58_RS02480;Dbxref=Genbank:WP_114867072.1;Name=WP_114867072.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413430.1;locus_tag=LPH58_RS02480;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_114867072.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 607644 607767 . + . ID=gene-LPH58_RS02485;Name=LPH58_RS02485;end_range=607767,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS02485;old_locus_tag=LPH58_02485;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 607644 607767 . + 0 ID=cds-LPH58_RS02485;Parent=gene-LPH58_RS02485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;end_range=607767,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003227859.1;locus_tag=LPH58_RS02485;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 607951 608493 . + . ID=gene-LPH58_RS02490;Name=LPH58_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02490;old_locus_tag=LPH58_02490 NZ_CP087690.1 GeneMarkS-2+ CDS 607951 608493 . + 0 ID=cds-WP_038270877.1;Parent=gene-LPH58_RS02490;Dbxref=Genbank:WP_038270877.1;Name=WP_038270877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02490;product=hypothetical protein;protein_id=WP_038270877.1;transl_table=11 NZ_CP087690.1 RefSeq gene 608533 608748 . - . ID=gene-LPH58_RS02495;Name=LPH58_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02495;old_locus_tag=LPH58_02495 NZ_CP087690.1 GeneMarkS-2+ CDS 608533 608748 . - 0 ID=cds-WP_230428164.1;Parent=gene-LPH58_RS02495;Dbxref=Genbank:WP_230428164.1;Name=WP_230428164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02495;product=hypothetical protein;protein_id=WP_230428164.1;transl_table=11 NZ_CP087690.1 RefSeq gene 609107 609598 . + . ID=gene-LPH58_RS02500;Name=LPH58_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02500;old_locus_tag=LPH58_02500 NZ_CP087690.1 GeneMarkS-2+ CDS 609107 609598 . + 0 ID=cds-WP_038270878.1;Parent=gene-LPH58_RS02500;Dbxref=Genbank:WP_038270878.1;Name=WP_038270878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02500;product=hypothetical protein;protein_id=WP_038270878.1;transl_table=11 NZ_CP087690.1 RefSeq gene 609750 609923 . - . ID=gene-LPH58_RS02505;Name=LPH58_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02505;old_locus_tag=LPH58_02505 NZ_CP087690.1 GeneMarkS-2+ CDS 609750 609923 . - 0 ID=cds-WP_160165157.1;Parent=gene-LPH58_RS02505;Dbxref=Genbank:WP_160165157.1;Name=WP_160165157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02505;product=hypothetical protein;protein_id=WP_160165157.1;transl_table=11 NZ_CP087690.1 RefSeq gene 610183 610458 . - . ID=gene-LPH58_RS02510;Name=LPH58_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02510;old_locus_tag=LPH58_02510 NZ_CP087690.1 Protein Homology CDS 610183 610458 . - 0 ID=cds-WP_051482289.1;Parent=gene-LPH58_RS02510;Dbxref=Genbank:WP_051482289.1;Name=WP_051482289.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027273.2;locus_tag=LPH58_RS02510;product=YdaS family helix-turn-helix protein;protein_id=WP_051482289.1;transl_table=11 NZ_CP087690.1 RefSeq gene 610556 610879 . + . ID=gene-LPH58_RS02515;Name=LPH58_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02515;old_locus_tag=LPH58_02515 NZ_CP087690.1 GeneMarkS-2+ CDS 610556 610879 . + 0 ID=cds-WP_069636207.1;Parent=gene-LPH58_RS02515;Dbxref=Genbank:WP_069636207.1;Name=WP_069636207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02515;product=hypothetical protein;protein_id=WP_069636207.1;transl_table=11 NZ_CP087690.1 RefSeq gene 611602 611952 . + . ID=gene-LPH58_RS02520;Name=LPH58_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02520;old_locus_tag=LPH58_02520 NZ_CP087690.1 GeneMarkS-2+ CDS 611602 611952 . + 0 ID=cds-WP_152536599.1;Parent=gene-LPH58_RS02520;Dbxref=Genbank:WP_152536599.1;Name=WP_152536599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02520;product=hypothetical protein;protein_id=WP_152536599.1;transl_table=11 NZ_CP087690.1 RefSeq gene 612136 612333 . + . ID=gene-LPH58_RS02525;Name=LPH58_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02525;old_locus_tag=LPH58_02525 NZ_CP087690.1 GeneMarkS-2+ CDS 612136 612333 . + 0 ID=cds-WP_038270880.1;Parent=gene-LPH58_RS02525;Dbxref=Genbank:WP_038270880.1;Name=WP_038270880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02525;product=hypothetical protein;protein_id=WP_038270880.1;transl_table=11 NZ_CP087690.1 RefSeq gene 612470 612640 . + . ID=gene-LPH58_RS02530;Name=LPH58_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02530;old_locus_tag=LPH58_02530 NZ_CP087690.1 GeneMarkS-2+ CDS 612470 612640 . + 0 ID=cds-WP_160165158.1;Parent=gene-LPH58_RS02530;Dbxref=Genbank:WP_160165158.1;Name=WP_160165158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02530;product=hypothetical protein;protein_id=WP_160165158.1;transl_table=11 NZ_CP087690.1 RefSeq gene 612843 613061 . + . ID=gene-LPH58_RS02535;Name=LPH58_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02535;old_locus_tag=LPH58_02535 NZ_CP087690.1 Protein Homology CDS 612843 613061 . + 0 ID=cds-WP_038270881.1;Parent=gene-LPH58_RS02535;Dbxref=Genbank:WP_038270881.1;Name=WP_038270881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.2;locus_tag=LPH58_RS02535;product=AlpA family phage regulatory protein;protein_id=WP_038270881.1;transl_table=11 NZ_CP087690.1 RefSeq gene 615489 616127 . + . ID=gene-LPH58_RS02540;Name=LPH58_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02540;old_locus_tag=LPH58_02540 NZ_CP087690.1 Protein Homology CDS 615489 616127 . + 0 ID=cds-WP_038271002.1;Parent=gene-LPH58_RS02540;Dbxref=Genbank:WP_038271002.1;Name=WP_038271002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003490472.1;locus_tag=LPH58_RS02540;product=DUF4375 domain-containing protein;protein_id=WP_038271002.1;transl_table=11 NZ_CP087690.1 RefSeq gene 617036 617329 . - . ID=gene-LPH58_RS02545;Name=LPH58_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02545;old_locus_tag=LPH58_02545 NZ_CP087690.1 Protein Homology CDS 617036 617329 . - 0 ID=cds-WP_038270884.1;Parent=gene-LPH58_RS02545;Dbxref=Genbank:WP_038270884.1;Name=WP_038270884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893619.1;locus_tag=LPH58_RS02545;product=DUF2782 domain-containing protein;protein_id=WP_038270884.1;transl_table=11 NZ_CP087690.1 RefSeq gene 617414 620179 . + . ID=gene-LPH58_RS02550;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LPH58_RS02550;old_locus_tag=LPH58_02550 NZ_CP087690.1 Protein Homology CDS 617414 620179 . + 0 ID=cds-WP_038271003.1;Parent=gene-LPH58_RS02550;Dbxref=Genbank:WP_038271003.1;Name=WP_038271003.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159421.1;locus_tag=LPH58_RS02550;product=DNA polymerase I;protein_id=WP_038271003.1;transl_table=11 NZ_CP087690.1 RefSeq gene 621379 622047 . + . ID=gene-LPH58_RS02555;Name=LPH58_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02555;old_locus_tag=LPH58_02555 NZ_CP087690.1 Protein Homology CDS 621379 622047 . + 0 ID=cds-WP_051482290.1;Parent=gene-LPH58_RS02555;Dbxref=Genbank:WP_051482290.1;Name=WP_051482290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017114807.1;locus_tag=LPH58_RS02555;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_051482290.1;transl_table=11 NZ_CP087690.1 RefSeq gene 622245 623369 . + . ID=gene-LPH58_RS02560;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LPH58_RS02560;old_locus_tag=LPH58_02560 NZ_CP087690.1 Protein Homology CDS 622245 623369 . + 0 ID=cds-WP_038271004.1;Parent=gene-LPH58_RS02560;Dbxref=Genbank:WP_038271004.1;Name=WP_038271004.1;Ontology_term=GO:0009220,GO:0004088,GO:0005951;gbkey=CDS;gene=carA;go_component=carbamoyl-phosphate synthase complex|0005951||IEA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893623.1;locus_tag=LPH58_RS02560;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_038271004.1;transl_table=11 NZ_CP087690.1 RefSeq gene 623803 627045 . + . ID=gene-LPH58_RS02565;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LPH58_RS02565;old_locus_tag=LPH58_02565 NZ_CP087690.1 Protein Homology CDS 623803 627045 . + 0 ID=cds-WP_038270888.1;Parent=gene-LPH58_RS02565;Dbxref=Genbank:WP_038270888.1;Name=WP_038270888.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085673.1;locus_tag=LPH58_RS02565;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_038270888.1;transl_table=11 NZ_CP087690.1 RefSeq gene 627042 627518 . + . ID=gene-LPH58_RS02570;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LPH58_RS02570;old_locus_tag=LPH58_02570 NZ_CP087690.1 Protein Homology CDS 627042 627518 . + 0 ID=cds-WP_081755418.1;Parent=gene-LPH58_RS02570;Dbxref=Genbank:WP_081755418.1;Name=WP_081755418.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085672.1;locus_tag=LPH58_RS02570;product=transcription elongation factor GreA;protein_id=WP_081755418.1;transl_table=11 NZ_CP087690.1 RefSeq gene 627526 628446 . + . ID=gene-LPH58_RS02575;Name=LPH58_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02575;old_locus_tag=LPH58_02575 NZ_CP087690.1 Protein Homology CDS 627526 628446 . + 0 ID=cds-WP_038270892.1;Parent=gene-LPH58_RS02575;Dbxref=Genbank:WP_038270892.1;Name=WP_038270892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806444.1;locus_tag=LPH58_RS02575;product=phosphoglycerate mutase;protein_id=WP_038270892.1;transl_table=11 NZ_CP087690.1 RefSeq gene 628449 630215 . + . ID=gene-LPH58_RS02580;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LPH58_RS02580;old_locus_tag=LPH58_02580 NZ_CP087690.1 Protein Homology CDS 628449 630215 . + 0 ID=cds-WP_114867209.1;Parent=gene-LPH58_RS02580;Dbxref=Genbank:WP_114867209.1;Name=WP_114867209.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337671.1;locus_tag=LPH58_RS02580;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_114867209.1;transl_table=11 NZ_CP087690.1 RefSeq gene 630827 631952 . + . ID=gene-LPH58_RS02585;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LPH58_RS02585;old_locus_tag=LPH58_02585 NZ_CP087690.1 Protein Homology CDS 630827 630901 . + 0 ID=cds-WP_114867074.1;Parent=gene-LPH58_RS02585;Dbxref=Genbank:WP_114867074.1;Name=WP_114867074.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037064.1;locus_tag=LPH58_RS02585;product=peptide chain release factor 2;protein_id=WP_114867074.1;transl_table=11 NZ_CP087690.1 Protein Homology CDS 630903 631952 . + 0 ID=cds-WP_114867074.1;Parent=gene-LPH58_RS02585;Dbxref=Genbank:WP_114867074.1;Name=WP_114867074.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014037064.1;locus_tag=LPH58_RS02585;product=peptide chain release factor 2;protein_id=WP_114867074.1;transl_table=11 NZ_CP087690.1 RefSeq gene 632138 633658 . + . ID=gene-LPH58_RS02590;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LPH58_RS02590;old_locus_tag=LPH58_02590 NZ_CP087690.1 Protein Homology CDS 632138 633658 . + 0 ID=cds-WP_038270894.1;Parent=gene-LPH58_RS02590;Dbxref=Genbank:WP_038270894.1;Name=WP_038270894.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085668.1;locus_tag=LPH58_RS02590;product=lysine--tRNA ligase;protein_id=WP_038270894.1;transl_table=11 NZ_CP087690.1 RefSeq gene 633802 634944 . + . ID=gene-LPH58_RS02595;Name=LPH58_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02595;old_locus_tag=LPH58_02595 NZ_CP087690.1 Protein Homology CDS 633802 634944 . + 0 ID=cds-WP_051482298.1;Parent=gene-LPH58_RS02595;Dbxref=Genbank:WP_051482298.1;Name=WP_051482298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085667.1;locus_tag=LPH58_RS02595;product=two-component system response regulator;protein_id=WP_051482298.1;transl_table=11 NZ_CP087690.1 RefSeq gene 634928 637084 . + . ID=gene-LPH58_RS02600;Name=LPH58_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02600;old_locus_tag=LPH58_02600 NZ_CP087690.1 Protein Homology CDS 634928 637084 . + 0 ID=cds-WP_038270895.1;Parent=gene-LPH58_RS02600;Dbxref=Genbank:WP_038270895.1;Name=WP_038270895.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237699.1;locus_tag=LPH58_RS02600;product=response regulator;protein_id=WP_038270895.1;transl_table=11 NZ_CP087690.1 RefSeq gene 637121 637984 . - . ID=gene-LPH58_RS02605;Name=LPH58_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02605;old_locus_tag=LPH58_02605 NZ_CP087690.1 Protein Homology CDS 637121 637984 . - 0 ID=cds-WP_038270896.1;Parent=gene-LPH58_RS02605;Dbxref=Genbank:WP_038270896.1;Name=WP_038270896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850991.1;locus_tag=LPH58_RS02605;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_038270896.1;transl_table=11 NZ_CP087690.1 RefSeq gene 638459 641062 . + . ID=gene-LPH58_RS02610;Name=LPH58_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02610;old_locus_tag=LPH58_02610 NZ_CP087690.1 Protein Homology CDS 638459 641062 . + 0 ID=cds-WP_038270898.1;Parent=gene-LPH58_RS02610;Dbxref=Genbank:WP_038270898.1;Name=WP_038270898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085664.1;locus_tag=LPH58_RS02610;product=bifunctional aspartate kinase/diaminopimelate decarboxylase;protein_id=WP_038270898.1;transl_table=11 NZ_CP087690.1 RefSeq gene 641153 642514 . + . ID=gene-LPH58_RS02615;Name=murL;gbkey=Gene;gene=murL;gene_biotype=protein_coding;locus_tag=LPH58_RS02615;old_locus_tag=LPH58_02615 NZ_CP087690.1 Protein Homology CDS 641153 642514 . + 0 ID=cds-WP_038270899.1;Parent=gene-LPH58_RS02615;Dbxref=Genbank:WP_038270899.1;Name=WP_038270899.1;Ontology_term=GO:0009252,GO:0016855;gbkey=CDS;gene=murL;go_function=racemase and epimerase activity%2C acting on amino acids and derivatives|0016855||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003470437.1;locus_tag=LPH58_RS02615;product=UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase;protein_id=WP_038270899.1;transl_table=11 NZ_CP087690.1 RefSeq gene 642495 643898 . + . ID=gene-LPH58_RS02620;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LPH58_RS02620;old_locus_tag=LPH58_02620 NZ_CP087690.1 Protein Homology CDS 642495 643898 . + 0 ID=cds-WP_038270900.1;Parent=gene-LPH58_RS02620;Dbxref=Genbank:WP_038270900.1;Name=WP_038270900.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085662.1;locus_tag=LPH58_RS02620;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_038270900.1;transl_table=11 NZ_CP087690.1 RefSeq gene 644121 644369 . - . ID=gene-LPH58_RS02625;Name=LPH58_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02625;old_locus_tag=LPH58_02625 NZ_CP087690.1 GeneMarkS-2+ CDS 644121 644369 . - 0 ID=cds-WP_152536600.1;Parent=gene-LPH58_RS02625;Dbxref=Genbank:WP_152536600.1;Name=WP_152536600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02625;product=hypothetical protein;protein_id=WP_152536600.1;transl_table=11 NZ_CP087690.1 RefSeq gene 644411 644536 . + . ID=gene-LPH58_RS11920;Name=LPH58_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11920 NZ_CP087690.1 GeneMarkS-2+ CDS 644411 644536 . + 0 ID=cds-WP_267903171.1;Parent=gene-LPH58_RS11920;Dbxref=Genbank:WP_267903171.1;Name=WP_267903171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11920;product=hypothetical protein;protein_id=WP_267903171.1;transl_table=11 NZ_CP087690.1 RefSeq gene 644570 644713 . + . ID=gene-LPH58_RS02630;Name=LPH58_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02630;old_locus_tag=LPH58_02630 NZ_CP087690.1 GeneMarkS-2+ CDS 644570 644713 . + 0 ID=cds-WP_160165159.1;Parent=gene-LPH58_RS02630;Dbxref=Genbank:WP_160165159.1;Name=WP_160165159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02630;product=hypothetical protein;protein_id=WP_160165159.1;transl_table=11 NZ_CP087690.1 RefSeq gene 646453 646537 . - . ID=gene-LPH58_RS02635;Name=LPH58_RS02635;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02635;old_locus_tag=LPH58_02635 NZ_CP087690.1 tRNAscan-SE tRNA 646453 646537 . - . ID=rna-LPH58_RS02635;Parent=gene-LPH58_RS02635;anticodon=(pos:complement(646501..646503));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02635;product=tRNA-Leu NZ_CP087690.1 tRNAscan-SE exon 646453 646537 . - . ID=exon-LPH58_RS02635-1;Parent=rna-LPH58_RS02635;anticodon=(pos:complement(646501..646503));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02635;product=tRNA-Leu NZ_CP087690.1 RefSeq gene 647229 648188 . + . ID=gene-LPH58_RS02640;Name=LPH58_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02640;old_locus_tag=LPH58_02640 NZ_CP087690.1 Protein Homology CDS 647229 648188 . + 0 ID=cds-WP_038270902.1;Parent=gene-LPH58_RS02640;Dbxref=Genbank:WP_038270902.1;Name=WP_038270902.1;Ontology_term=GO:0008413;gbkey=CDS;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850994.1;locus_tag=LPH58_RS02640;product=Nudix family hydrolase;protein_id=WP_038270902.1;transl_table=11 NZ_CP087690.1 RefSeq gene 648201 648470 . + . ID=gene-LPH58_RS02645;Name=LPH58_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02645;old_locus_tag=LPH58_02645 NZ_CP087690.1 GeneMarkS-2+ CDS 648201 648470 . + 0 ID=cds-WP_038270903.1;Parent=gene-LPH58_RS02645;Dbxref=Genbank:WP_038270903.1;Name=WP_038270903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02645;product=hypothetical protein;protein_id=WP_038270903.1;transl_table=11 NZ_CP087690.1 RefSeq gene 648822 649649 . - . ID=gene-LPH58_RS02650;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LPH58_RS02650;old_locus_tag=LPH58_02650 NZ_CP087690.1 Protein Homology CDS 648822 649649 . - 0 ID=cds-WP_038270904.1;Parent=gene-LPH58_RS02650;Dbxref=Genbank:WP_038270904.1;Name=WP_038270904.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850995.1;locus_tag=LPH58_RS02650;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_038270904.1;transl_table=11 NZ_CP087690.1 RefSeq gene 650816 651550 . - . ID=gene-LPH58_RS02655;Name=LPH58_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02655;old_locus_tag=LPH58_02655 NZ_CP087690.1 Protein Homology CDS 650816 651550 . - 0 ID=cds-WP_038270905.1;Parent=gene-LPH58_RS02655;Dbxref=Genbank:WP_038270905.1;Name=WP_038270905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893640.1;locus_tag=LPH58_RS02655;product=SIMPL domain-containing protein;protein_id=WP_038270905.1;transl_table=11 NZ_CP087690.1 RefSeq gene 651668 652237 . + . ID=gene-LPH58_RS02660;Name=LPH58_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02660;old_locus_tag=LPH58_02660 NZ_CP087690.1 Protein Homology CDS 651668 652237 . + 0 ID=cds-WP_038271007.1;Parent=gene-LPH58_RS02660;Dbxref=Genbank:WP_038271007.1;Name=WP_038271007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017915486.1;locus_tag=LPH58_RS02660;product=Maf-like protein;protein_id=WP_038271007.1;transl_table=11 NZ_CP087690.1 RefSeq gene 652238 653734 . + . ID=gene-LPH58_RS02665;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LPH58_RS02665;old_locus_tag=LPH58_02665 NZ_CP087690.1 Protein Homology CDS 652238 653734 . + 0 ID=cds-WP_038270906.1;Parent=gene-LPH58_RS02665;Dbxref=Genbank:WP_038270906.1;Name=WP_038270906.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,ribonuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002802933.1;locus_tag=LPH58_RS02665;product=ribonuclease G;protein_id=WP_038270906.1;transl_table=11 NZ_CP087690.1 RefSeq gene 653890 657690 . + . ID=gene-LPH58_RS02670;Name=LPH58_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02670;old_locus_tag=LPH58_02670 NZ_CP087690.1 Protein Homology CDS 653890 657690 . + 0 ID=cds-WP_230428165.1;Parent=gene-LPH58_RS02670;Dbxref=Genbank:WP_230428165.1;Name=WP_230428165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607624.1;locus_tag=LPH58_RS02670;product=YhdP family protein;protein_id=WP_230428165.1;transl_table=11 NZ_CP087690.1 RefSeq gene 657824 659281 . + . ID=gene-LPH58_RS02675;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LPH58_RS02675;old_locus_tag=LPH58_02675 NZ_CP087690.1 Protein Homology CDS 657824 659281 . + 0 ID=cds-WP_038270908.1;Parent=gene-LPH58_RS02675;Dbxref=Genbank:WP_038270908.1;Name=WP_038270908.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972594.1;locus_tag=LPH58_RS02675;product=metalloprotease TldD;protein_id=WP_038270908.1;transl_table=11 NZ_CP087690.1 RefSeq gene 659788 660357 . - . ID=gene-LPH58_RS02680;Name=LPH58_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02680;old_locus_tag=LPH58_02680 NZ_CP087690.1 Protein Homology CDS 659788 660357 . - 0 ID=cds-WP_051482299.1;Parent=gene-LPH58_RS02680;Dbxref=Genbank:WP_051482299.1;Name=WP_051482299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852531.1;locus_tag=LPH58_RS02680;product=ribosome-associated protein;protein_id=WP_051482299.1;transl_table=11 NZ_CP087690.1 RefSeq gene 660417 661784 . + . ID=gene-LPH58_RS02685;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LPH58_RS02685;old_locus_tag=LPH58_02685 NZ_CP087690.1 Protein Homology CDS 660417 661784 . + 0 ID=cds-WP_038270909.1;Parent=gene-LPH58_RS02685;Dbxref=Genbank:WP_038270909.1;Name=WP_038270909.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090050.1;locus_tag=LPH58_RS02685;product=metalloprotease PmbA;protein_id=WP_038270909.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 661852 662586 . + . ID=gene-LPH58_RS11925;Name=LPH58_RS11925;end_range=662586,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11925;partial=true;pseudo=true;start_range=.,661852 NZ_CP087690.1 Protein Homology CDS 661852 662586 . + 0 ID=cds-LPH58_RS11925;Parent=gene-LPH58_RS11925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=662586,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003092331.1;locus_tag=LPH58_RS11925;partial=true;product=PDDEXK nuclease domain-containing protein;pseudo=true;start_range=.,661852;transl_table=11 NZ_CP087690.1 RefSeq gene 662775 662860 . + . ID=gene-LPH58_RS02700;Name=LPH58_RS02700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02700;old_locus_tag=LPH58_02700 NZ_CP087690.1 tRNAscan-SE tRNA 662775 662860 . + . ID=rna-LPH58_RS02700;Parent=gene-LPH58_RS02700;anticodon=(pos:662807..662809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02700;product=tRNA-Ser NZ_CP087690.1 tRNAscan-SE exon 662775 662860 . + . ID=exon-LPH58_RS02700-1;Parent=rna-LPH58_RS02700;anticodon=(pos:662807..662809);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02700;product=tRNA-Ser NZ_CP087690.1 RefSeq gene 662926 663393 . - . ID=gene-LPH58_RS02705;Name=LPH58_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02705;old_locus_tag=LPH58_02705 NZ_CP087690.1 Protein Homology CDS 662926 663393 . - 0 ID=cds-WP_038270910.1;Parent=gene-LPH58_RS02705;Dbxref=Genbank:WP_038270910.1;Name=WP_038270910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015824.2;locus_tag=LPH58_RS02705;product=YfbU family protein;protein_id=WP_038270910.1;transl_table=11 NZ_CP087690.1 RefSeq gene 664185 664595 . - . ID=gene-LPH58_RS02710;Name=LPH58_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02710;old_locus_tag=LPH58_02710 NZ_CP087690.1 Protein Homology CDS 664185 664595 . - 0 ID=cds-WP_201745835.1;Parent=gene-LPH58_RS02710;Dbxref=Genbank:WP_201745835.1;Name=WP_201745835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015925.2;locus_tag=LPH58_RS02710;product=putative quinol monooxygenase;protein_id=WP_201745835.1;transl_table=11 NZ_CP087690.1 RefSeq gene 664915 665829 . - . ID=gene-LPH58_RS02715;Name=LPH58_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02715;old_locus_tag=LPH58_02715 NZ_CP087690.1 Protein Homology CDS 664915 665829 . - 0 ID=cds-WP_038271010.1;Parent=gene-LPH58_RS02715;Dbxref=Genbank:WP_038271010.1;Name=WP_038271010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017916574.1;locus_tag=LPH58_RS02715;product=LysR family transcriptional regulator;protein_id=WP_038271010.1;transl_table=11 NZ_CP087690.1 RefSeq gene 666008 666577 . + . ID=gene-LPH58_RS02720;Name=LPH58_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02720;old_locus_tag=LPH58_02720 NZ_CP087690.1 Protein Homology CDS 666008 666577 . + 0 ID=cds-WP_038270913.1;Parent=gene-LPH58_RS02720;Dbxref=Genbank:WP_038270913.1;Name=WP_038270913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852528.1;locus_tag=LPH58_RS02720;product=flavodoxin family protein;protein_id=WP_038270913.1;transl_table=11 NZ_CP087690.1 RefSeq gene 666615 666914 . + . ID=gene-LPH58_RS02725;Name=LPH58_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02725;old_locus_tag=LPH58_02725 NZ_CP087690.1 Protein Homology CDS 666615 666914 . + 0 ID=cds-WP_038270915.1;Parent=gene-LPH58_RS02725;Dbxref=Genbank:WP_038270915.1;Name=WP_038270915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852527.1;locus_tag=LPH58_RS02725;product=superoxide dismutase;protein_id=WP_038270915.1;transl_table=11 NZ_CP087690.1 RefSeq gene 667003 668061 . + . ID=gene-LPH58_RS02730;Name=LPH58_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02730;old_locus_tag=LPH58_02730 NZ_CP087690.1 Protein Homology CDS 667003 668061 . + 0 ID=cds-WP_038270917.1;Parent=gene-LPH58_RS02730;Dbxref=Genbank:WP_038270917.1;Name=WP_038270917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852526.1;locus_tag=LPH58_RS02730;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_038270917.1;transl_table=11 NZ_CP087690.1 RefSeq gene 668066 668755 . + . ID=gene-LPH58_RS02735;Name=LPH58_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02735;old_locus_tag=LPH58_02735 NZ_CP087690.1 Protein Homology CDS 668066 668755 . + 0 ID=cds-WP_038270918.1;Parent=gene-LPH58_RS02735;Dbxref=Genbank:WP_038270918.1;Name=WP_038270918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893654.1;locus_tag=LPH58_RS02735;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_038270918.1;transl_table=11 NZ_CP087690.1 RefSeq gene 669611 669814 . + . ID=gene-LPH58_RS02740;Name=LPH58_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02740;old_locus_tag=LPH58_02740 NZ_CP087690.1 GeneMarkS-2+ CDS 669611 669814 . + 0 ID=cds-WP_051482293.1;Parent=gene-LPH58_RS02740;Dbxref=Genbank:WP_051482293.1;Name=WP_051482293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS02740;product=hypothetical protein;protein_id=WP_051482293.1;transl_table=11 NZ_CP087690.1 RefSeq gene 669882 670865 . + . ID=gene-LPH58_RS02745;Name=LPH58_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02745;old_locus_tag=LPH58_02745 NZ_CP087690.1 Protein Homology CDS 669882 670865 . + 0 ID=cds-WP_038270920.1;Parent=gene-LPH58_RS02745;Dbxref=Genbank:WP_038270920.1;Name=WP_038270920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007508381.1;locus_tag=LPH58_RS02745;product=aldo/keto reductase;protein_id=WP_038270920.1;transl_table=11 NZ_CP087690.1 RefSeq gene 671087 671719 . + . ID=gene-LPH58_RS02750;Name=LPH58_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02750;old_locus_tag=LPH58_02750 NZ_CP087690.1 Protein Homology CDS 671087 671719 . + 0 ID=cds-WP_200866193.1;Parent=gene-LPH58_RS02750;Dbxref=Genbank:WP_200866193.1;Name=WP_200866193.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016777.2;locus_tag=LPH58_RS02750;product=amidohydrolase family protein;protein_id=WP_200866193.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 672061 672582 . + . ID=gene-LPH58_RS02755;Name=LPH58_RS02755;end_range=672582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS02755;old_locus_tag=LPH58_02755;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 672061 672582 . + 0 ID=cds-LPH58_RS02755;Parent=gene-LPH58_RS02755;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;end_range=672582,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657241.1;locus_tag=LPH58_RS02755;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 673675 675042 . - . ID=gene-LPH58_RS02760;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LPH58_RS02760;old_locus_tag=LPH58_02760 NZ_CP087690.1 Protein Homology CDS 673675 675042 . - 0 ID=cds-WP_038271011.1;Parent=gene-LPH58_RS02760;Dbxref=Genbank:WP_038271011.1;Name=WP_038271011.1;Ontology_term=GO:0009103,GO:0009252,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407581.1;locus_tag=LPH58_RS02760;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_038271011.1;transl_table=11 NZ_CP087690.1 RefSeq gene 675405 675980 . - . ID=gene-LPH58_RS02765;Name=LPH58_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02765;old_locus_tag=LPH58_02765 NZ_CP087690.1 Protein Homology CDS 675405 675980 . - 0 ID=cds-WP_038270923.1;Parent=gene-LPH58_RS02765;Dbxref=Genbank:WP_038270923.1;Name=WP_038270923.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852523.1;locus_tag=LPH58_RS02765;product=chorismate mutase;protein_id=WP_038270923.1;transl_table=11 NZ_CP087690.1 RefSeq gene 676247 676669 . - . ID=gene-LPH58_RS02770;Name=LPH58_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02770;old_locus_tag=LPH58_02770 NZ_CP087690.1 Protein Homology CDS 676247 676669 . - 0 ID=cds-WP_038270925.1;Parent=gene-LPH58_RS02770;Dbxref=Genbank:WP_038270925.1;Name=WP_038270925.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407577.1;locus_tag=LPH58_RS02770;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_038270925.1;transl_table=11 NZ_CP087690.1 RefSeq gene 676776 678176 . - . ID=gene-LPH58_RS02775;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LPH58_RS02775;old_locus_tag=LPH58_02775 NZ_CP087690.1 Protein Homology CDS 676776 678176 . - 0 ID=cds-WP_038270927.1;Parent=gene-LPH58_RS02775;Dbxref=Genbank:WP_038270927.1;Name=WP_038270927.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090068.1;locus_tag=LPH58_RS02775;product=F0F1 ATP synthase subunit beta;protein_id=WP_038270927.1;transl_table=11 NZ_CP087690.1 RefSeq gene 678256 679119 . - . ID=gene-LPH58_RS02780;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LPH58_RS02780;old_locus_tag=LPH58_02780 NZ_CP087690.1 Protein Homology CDS 678256 679119 . - 0 ID=cds-WP_038270929.1;Parent=gene-LPH58_RS02780;Dbxref=Genbank:WP_038270929.1;Name=WP_038270929.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371995.1;locus_tag=LPH58_RS02780;product=F0F1 ATP synthase subunit gamma;protein_id=WP_038270929.1;transl_table=11 NZ_CP087690.1 RefSeq gene 679211 680758 . - . ID=gene-LPH58_RS02785;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LPH58_RS02785;old_locus_tag=LPH58_02785 NZ_CP087690.1 Protein Homology CDS 679211 680758 . - 0 ID=cds-WP_038270931.1;Parent=gene-LPH58_RS02785;Dbxref=Genbank:WP_038270931.1;Name=WP_038270931.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161761.1;locus_tag=LPH58_RS02785;product=F0F1 ATP synthase subunit alpha;protein_id=WP_038270931.1;transl_table=11 NZ_CP087690.1 RefSeq gene 680806 681333 . - . ID=gene-LPH58_RS02790;Name=LPH58_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02790;old_locus_tag=LPH58_02790 NZ_CP087690.1 Protein Homology CDS 680806 681333 . - 0 ID=cds-WP_038270933.1;Parent=gene-LPH58_RS02790;Dbxref=Genbank:WP_038270933.1;Name=WP_038270933.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304550.1;locus_tag=LPH58_RS02790;product=F0F1 ATP synthase subunit delta;protein_id=WP_038270933.1;transl_table=11 NZ_CP087690.1 RefSeq gene 681337 681807 . - . ID=gene-LPH58_RS02795;Name=LPH58_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02795;old_locus_tag=LPH58_02795 NZ_CP087690.1 Protein Homology CDS 681337 681807 . - 0 ID=cds-WP_038270934.1;Parent=gene-LPH58_RS02795;Dbxref=Genbank:WP_038270934.1;Name=WP_038270934.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901014.1;locus_tag=LPH58_RS02795;product=F0F1 ATP synthase subunit B;protein_id=WP_038270934.1;transl_table=11 NZ_CP087690.1 RefSeq gene 681931 682236 . - . ID=gene-LPH58_RS02800;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LPH58_RS02800;old_locus_tag=LPH58_02800 NZ_CP087690.1 Protein Homology CDS 681931 682236 . - 0 ID=cds-WP_038270935.1;Parent=gene-LPH58_RS02800;Dbxref=Genbank:WP_038270935.1;Name=WP_038270935.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372004.1;locus_tag=LPH58_RS02800;product=F0F1 ATP synthase subunit C;protein_id=WP_038270935.1;transl_table=11 NZ_CP087690.1 RefSeq gene 682298 683095 . - . ID=gene-LPH58_RS02805;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LPH58_RS02805;old_locus_tag=LPH58_02805 NZ_CP087690.1 Protein Homology CDS 682298 683095 . - 0 ID=cds-WP_038270936.1;Parent=gene-LPH58_RS02805;Dbxref=Genbank:WP_038270936.1;Name=WP_038270936.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814108.1;locus_tag=LPH58_RS02805;product=F0F1 ATP synthase subunit A;protein_id=WP_038270936.1;transl_table=11 NZ_CP087690.1 RefSeq gene 683124 683495 . - . ID=gene-LPH58_RS02810;Name=LPH58_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02810;old_locus_tag=LPH58_02810 NZ_CP087690.1 Protein Homology CDS 683124 683495 . - 0 ID=cds-WP_038270937.1;Parent=gene-LPH58_RS02810;Dbxref=Genbank:WP_038270937.1;Name=WP_038270937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893667.1;locus_tag=LPH58_RS02810;product=hypothetical protein;protein_id=WP_038270937.1;transl_table=11 NZ_CP087690.1 RefSeq gene 684558 684869 . + . ID=gene-LPH58_RS02815;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LPH58_RS02815;old_locus_tag=LPH58_02815 NZ_CP087690.1 Protein Homology CDS 684558 684869 . + 0 ID=cds-WP_038270938.1;Parent=gene-LPH58_RS02815;Dbxref=Genbank:WP_038270938.1;Name=WP_038270938.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160477.1;locus_tag=LPH58_RS02815;product=30S ribosomal protein S10;protein_id=WP_038270938.1;transl_table=11 NZ_CP087690.1 RefSeq gene 684881 685528 . + . ID=gene-LPH58_RS02820;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LPH58_RS02820;old_locus_tag=LPH58_02820 NZ_CP087690.1 Protein Homology CDS 684881 685528 . + 0 ID=cds-WP_038270939.1;Parent=gene-LPH58_RS02820;Dbxref=Genbank:WP_038270939.1;Name=WP_038270939.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337684.1;locus_tag=LPH58_RS02820;product=50S ribosomal protein L3;protein_id=WP_038270939.1;transl_table=11 NZ_CP087690.1 RefSeq gene 685540 686145 . + . ID=gene-LPH58_RS02825;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LPH58_RS02825;old_locus_tag=LPH58_02825 NZ_CP087690.1 Protein Homology CDS 685540 686145 . + 0 ID=cds-WP_038270940.1;Parent=gene-LPH58_RS02825;Dbxref=Genbank:WP_038270940.1;Name=WP_038270940.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010371054.1;locus_tag=LPH58_RS02825;product=50S ribosomal protein L4;protein_id=WP_038270940.1;transl_table=11 NZ_CP087690.1 RefSeq gene 686142 686444 . + . ID=gene-LPH58_RS02830;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LPH58_RS02830;old_locus_tag=LPH58_02830 NZ_CP087690.1 Protein Homology CDS 686142 686444 . + 0 ID=cds-WP_081755424.1;Parent=gene-LPH58_RS02830;Dbxref=Genbank:WP_081755424.1;Name=WP_081755424.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090096.1;locus_tag=LPH58_RS02830;product=50S ribosomal protein L23;protein_id=WP_081755424.1;transl_table=11 NZ_CP087690.1 RefSeq gene 686455 687282 . + . ID=gene-LPH58_RS02835;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LPH58_RS02835;old_locus_tag=LPH58_02835 NZ_CP087690.1 Protein Homology CDS 686455 687282 . + 0 ID=cds-WP_038270942.1;Parent=gene-LPH58_RS02835;Dbxref=Genbank:WP_038270942.1;Name=WP_038270942.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009607340.1;locus_tag=LPH58_RS02835;product=50S ribosomal protein L2;protein_id=WP_038270942.1;transl_table=11 NZ_CP087690.1 RefSeq gene 687289 687558 . + . ID=gene-LPH58_RS02840;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LPH58_RS02840;old_locus_tag=LPH58_02840 NZ_CP087690.1 Protein Homology CDS 687289 687558 . + 0 ID=cds-WP_038270943.1;Parent=gene-LPH58_RS02840;Dbxref=Genbank:WP_038270943.1;Name=WP_038270943.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086525.1;locus_tag=LPH58_RS02840;product=30S ribosomal protein S19;protein_id=WP_038270943.1;transl_table=11 NZ_CP087690.1 RefSeq gene 687571 687906 . + . ID=gene-LPH58_RS02845;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LPH58_RS02845;old_locus_tag=LPH58_02845 NZ_CP087690.1 Protein Homology CDS 687571 687906 . + 0 ID=cds-WP_038270944.1;Parent=gene-LPH58_RS02845;Dbxref=Genbank:WP_038270944.1;Name=WP_038270944.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486710.1;locus_tag=LPH58_RS02845;product=50S ribosomal protein L22;protein_id=WP_038270944.1;transl_table=11 NZ_CP087690.1 RefSeq gene 687925 688644 . + . ID=gene-LPH58_RS02850;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LPH58_RS02850;old_locus_tag=LPH58_02850 NZ_CP087690.1 Protein Homology CDS 687925 688644 . + 0 ID=cds-WP_038270945.1;Parent=gene-LPH58_RS02850;Dbxref=Genbank:WP_038270945.1;Name=WP_038270945.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086530.1;locus_tag=LPH58_RS02850;product=30S ribosomal protein S3;protein_id=WP_038270945.1;transl_table=11 NZ_CP087690.1 RefSeq gene 688650 689063 . + . ID=gene-LPH58_RS02855;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LPH58_RS02855;old_locus_tag=LPH58_02855 NZ_CP087690.1 Protein Homology CDS 688650 689063 . + 0 ID=cds-WP_038270946.1;Parent=gene-LPH58_RS02855;Dbxref=Genbank:WP_038270946.1;Name=WP_038270946.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003479591.1;locus_tag=LPH58_RS02855;product=50S ribosomal protein L16;protein_id=WP_038270946.1;transl_table=11 NZ_CP087690.1 RefSeq gene 689063 689260 . + . ID=gene-LPH58_RS02860;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LPH58_RS02860;old_locus_tag=LPH58_02860 NZ_CP087690.1 Protein Homology CDS 689063 689260 . + 0 ID=cds-WP_038270947.1;Parent=gene-LPH58_RS02860;Dbxref=Genbank:WP_038270947.1;Name=WP_038270947.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090108.1;locus_tag=LPH58_RS02860;product=50S ribosomal protein L29;protein_id=WP_038270947.1;transl_table=11 NZ_CP087690.1 RefSeq gene 689260 689526 . + . ID=gene-LPH58_RS02865;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LPH58_RS02865;old_locus_tag=LPH58_02865 NZ_CP087690.1 Protein Homology CDS 689260 689526 . + 0 ID=cds-WP_038270948.1;Parent=gene-LPH58_RS02865;Dbxref=Genbank:WP_038270948.1;Name=WP_038270948.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsQ;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993374.1;locus_tag=LPH58_RS02865;product=30S ribosomal protein S17;protein_id=WP_038270948.1;transl_table=11 NZ_CP087690.1 RefSeq gene 689550 689918 . + . ID=gene-LPH58_RS02870;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LPH58_RS02870;old_locus_tag=LPH58_02870 NZ_CP087690.1 Protein Homology CDS 689550 689918 . + 0 ID=cds-WP_038270950.1;Parent=gene-LPH58_RS02870;Dbxref=Genbank:WP_038270950.1;Name=WP_038270950.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=LPH58_RS02870;product=50S ribosomal protein L14;protein_id=WP_038270950.1;transl_table=11 NZ_CP087690.1 RefSeq gene 689934 690251 . + . ID=gene-LPH58_RS02875;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LPH58_RS02875;old_locus_tag=LPH58_02875 NZ_CP087690.1 Protein Homology CDS 689934 690251 . + 0 ID=cds-WP_038271012.1;Parent=gene-LPH58_RS02875;Dbxref=Genbank:WP_038271012.1;Name=WP_038271012.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260025.1;locus_tag=LPH58_RS02875;product=50S ribosomal protein L24;protein_id=WP_038271012.1;transl_table=11 NZ_CP087690.1 RefSeq gene 690263 690802 . + . ID=gene-LPH58_RS02880;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LPH58_RS02880;old_locus_tag=LPH58_02880 NZ_CP087690.1 Protein Homology CDS 690263 690802 . + 0 ID=cds-WP_038270952.1;Parent=gene-LPH58_RS02880;Dbxref=Genbank:WP_038270952.1;Name=WP_038270952.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852426.1;locus_tag=LPH58_RS02880;product=50S ribosomal protein L5;protein_id=WP_038270952.1;transl_table=11 NZ_CP087690.1 RefSeq gene 690818 691123 . + . ID=gene-LPH58_RS02885;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LPH58_RS02885;old_locus_tag=LPH58_02885 NZ_CP087690.1 Protein Homology CDS 690818 691123 . + 0 ID=cds-WP_081755425.1;Parent=gene-LPH58_RS02885;Dbxref=Genbank:WP_081755425.1;Name=WP_081755425.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917137.1;locus_tag=LPH58_RS02885;product=30S ribosomal protein S14;protein_id=WP_081755425.1;transl_table=11 NZ_CP087690.1 RefSeq gene 691271 691669 . + . ID=gene-LPH58_RS02890;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LPH58_RS02890;old_locus_tag=LPH58_02890 NZ_CP087690.1 Protein Homology CDS 691271 691669 . + 0 ID=cds-WP_038270953.1;Parent=gene-LPH58_RS02890;Dbxref=Genbank:WP_038270953.1;Name=WP_038270953.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932726.1;locus_tag=LPH58_RS02890;product=30S ribosomal protein S8;protein_id=WP_038270953.1;transl_table=11 NZ_CP087690.1 RefSeq gene 691689 692216 . + . ID=gene-LPH58_RS02895;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LPH58_RS02895;old_locus_tag=LPH58_02895 NZ_CP087690.1 Protein Homology CDS 691689 692216 . + 0 ID=cds-WP_038270954.1;Parent=gene-LPH58_RS02895;Dbxref=Genbank:WP_038270954.1;Name=WP_038270954.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450642.1;locus_tag=LPH58_RS02895;product=50S ribosomal protein L6;protein_id=WP_038270954.1;transl_table=11 NZ_CP087690.1 RefSeq gene 692274 692633 . + . ID=gene-LPH58_RS02900;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LPH58_RS02900;old_locus_tag=LPH58_02900 NZ_CP087690.1 Protein Homology CDS 692274 692633 . + 0 ID=cds-WP_038270955.1;Parent=gene-LPH58_RS02900;Dbxref=Genbank:WP_038270955.1;Name=WP_038270955.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811659.1;locus_tag=LPH58_RS02900;product=50S ribosomal protein L18;protein_id=WP_038270955.1;transl_table=11 NZ_CP087690.1 RefSeq gene 692811 693347 . + . ID=gene-LPH58_RS02905;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LPH58_RS02905;old_locus_tag=LPH58_02905 NZ_CP087690.1 Protein Homology CDS 692811 693347 . + 0 ID=cds-WP_051482296.1;Parent=gene-LPH58_RS02905;Dbxref=Genbank:WP_051482296.1;Name=WP_051482296.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090125.1;locus_tag=LPH58_RS02905;product=30S ribosomal protein S5;protein_id=WP_051482296.1;transl_table=11 NZ_CP087690.1 RefSeq gene 693340 693531 . + . ID=gene-LPH58_RS02910;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LPH58_RS02910;old_locus_tag=LPH58_02910 NZ_CP087690.1 Protein Homology CDS 693340 693531 . + 0 ID=cds-WP_038270956.1;Parent=gene-LPH58_RS02910;Dbxref=Genbank:WP_038270956.1;Name=WP_038270956.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486678.1;locus_tag=LPH58_RS02910;product=50S ribosomal protein L30;protein_id=WP_038270956.1;transl_table=11 NZ_CP087690.1 RefSeq gene 693538 693981 . + . ID=gene-LPH58_RS02915;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LPH58_RS02915;old_locus_tag=LPH58_02915 NZ_CP087690.1 Protein Homology CDS 693538 693981 . + 0 ID=cds-WP_069636208.1;Parent=gene-LPH58_RS02915;Dbxref=Genbank:WP_069636208.1;Name=WP_069636208.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486676.1;locus_tag=LPH58_RS02915;product=50S ribosomal protein L15;protein_id=WP_069636208.1;transl_table=11 NZ_CP087690.1 RefSeq gene 693989 695362 . + . ID=gene-LPH58_RS02920;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LPH58_RS02920;old_locus_tag=LPH58_02920 NZ_CP087690.1 Protein Homology CDS 693989 695362 . + 0 ID=cds-WP_038271017.1;Parent=gene-LPH58_RS02920;Dbxref=Genbank:WP_038271017.1;Name=WP_038271017.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852429.1;locus_tag=LPH58_RS02920;product=preprotein translocase subunit SecY;protein_id=WP_038271017.1;transl_table=11 NZ_CP087690.1 RefSeq gene 695668 696024 . + . ID=gene-LPH58_RS02925;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LPH58_RS02925;old_locus_tag=LPH58_02925 NZ_CP087690.1 Protein Homology CDS 695668 696024 . + 0 ID=cds-WP_038270958.1;Parent=gene-LPH58_RS02925;Dbxref=Genbank:WP_038270958.1;Name=WP_038270958.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=LPH58_RS02925;product=30S ribosomal protein S13;protein_id=WP_038270958.1;transl_table=11 NZ_CP087690.1 RefSeq gene 696038 696430 . + . ID=gene-LPH58_RS02930;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LPH58_RS02930;old_locus_tag=LPH58_02930 NZ_CP087690.1 Protein Homology CDS 696038 696430 . + 0 ID=cds-WP_038270959.1;Parent=gene-LPH58_RS02930;Dbxref=Genbank:WP_038270959.1;Name=WP_038270959.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090135.1;locus_tag=LPH58_RS02930;product=30S ribosomal protein S11;protein_id=WP_038270959.1;transl_table=11 NZ_CP087690.1 RefSeq gene 696445 697071 . + . ID=gene-LPH58_RS02935;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LPH58_RS02935;old_locus_tag=LPH58_02935 NZ_CP087690.1 Protein Homology CDS 696445 697071 . + 0 ID=cds-WP_038270961.1;Parent=gene-LPH58_RS02935;Dbxref=Genbank:WP_038270961.1;Name=WP_038270961.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004145446.1;locus_tag=LPH58_RS02935;product=30S ribosomal protein S4;protein_id=WP_038270961.1;transl_table=11 NZ_CP087690.1 RefSeq gene 697126 698124 . + . ID=gene-LPH58_RS02940;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=LPH58_RS02940;old_locus_tag=LPH58_02940 NZ_CP087690.1 Protein Homology CDS 697126 698124 . + 0 ID=cds-WP_038270963.1;Parent=gene-LPH58_RS02940;Dbxref=Genbank:WP_038270963.1;Name=WP_038270963.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;gene=rpoA;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852431.1;locus_tag=LPH58_RS02940;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_038270963.1;transl_table=11 NZ_CP087690.1 RefSeq gene 698350 698733 . + . ID=gene-LPH58_RS02945;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LPH58_RS02945;old_locus_tag=LPH58_02945 NZ_CP087690.1 Protein Homology CDS 698350 698733 . + 0 ID=cds-WP_038270964.1;Parent=gene-LPH58_RS02945;Dbxref=Genbank:WP_038270964.1;Name=WP_038270964.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340456.1;locus_tag=LPH58_RS02945;product=50S ribosomal protein L17;protein_id=WP_038270964.1;transl_table=11 NZ_CP087690.1 RefSeq gene 700186 700446 . + . ID=gene-LPH58_RS02950;Name=LPH58_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02950;old_locus_tag=LPH58_02950 NZ_CP087690.1 Protein Homology CDS 700186 700446 . + 0 ID=cds-WP_038270966.1;Parent=gene-LPH58_RS02950;Dbxref=Genbank:WP_038270966.1;Name=WP_038270966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086547.1;locus_tag=LPH58_RS02950;product=accessory factor UbiK family protein;protein_id=WP_038270966.1;transl_table=11 NZ_CP087690.1 RefSeq gene 700457 701977 . + . ID=gene-LPH58_RS02955;Name=LPH58_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02955;old_locus_tag=LPH58_02955 NZ_CP087690.1 Protein Homology CDS 700457 701977 . + 0 ID=cds-WP_038270967.1;Parent=gene-LPH58_RS02955;Dbxref=Genbank:WP_038270967.1;Name=WP_038270967.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852434.1;locus_tag=LPH58_RS02955;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_038270967.1;transl_table=11 NZ_CP087690.1 RefSeq gene 703714 704655 . + . ID=gene-LPH58_RS02960;Name=LPH58_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02960;old_locus_tag=LPH58_02960 NZ_CP087690.1 Protein Homology CDS 703714 704655 . + 0 ID=cds-WP_230428167.1;Parent=gene-LPH58_RS02960;Dbxref=Genbank:WP_230428167.1;Name=WP_230428167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.2;locus_tag=LPH58_RS02960;product=triacylglycerol lipase;protein_id=WP_230428167.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 704656 705705 . + . ID=gene-LPH58_RS02965;Name=LPH58_RS02965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS02965;old_locus_tag=LPH58_02965;pseudo=true NZ_CP087690.1 Protein Homology CDS 704656 705705 . + 0 ID=cds-LPH58_RS02965;Parent=gene-LPH58_RS02965;Note=internal stop;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097653.1;locus_tag=LPH58_RS02965;product=lipase secretion chaperone;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 706390 706476 . - . ID=gene-LPH58_RS02970;Name=LPH58_RS02970;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02970;old_locus_tag=LPH58_02970 NZ_CP087690.1 tRNAscan-SE tRNA 706390 706476 . - . ID=rna-LPH58_RS02970;Parent=gene-LPH58_RS02970;anticodon=(pos:complement(706440..706442));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02970;product=tRNA-Leu NZ_CP087690.1 tRNAscan-SE exon 706390 706476 . - . ID=exon-LPH58_RS02970-1;Parent=rna-LPH58_RS02970;anticodon=(pos:complement(706440..706442));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02970;product=tRNA-Leu NZ_CP087690.1 RefSeq gene 706612 707904 . + . ID=gene-LPH58_RS02975;Name=LPH58_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02975;old_locus_tag=LPH58_02975 NZ_CP087690.1 Protein Homology CDS 706612 707904 . + 0 ID=cds-WP_038270969.1;Parent=gene-LPH58_RS02975;Dbxref=Genbank:WP_038270969.1;Name=WP_038270969.1;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852438.1;locus_tag=LPH58_RS02975;product=nucleotide sugar dehydrogenase;protein_id=WP_038270969.1;transl_table=11 NZ_CP087690.1 RefSeq gene 709936 710397 . - . ID=gene-LPH58_RS02980;Name=LPH58_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS02980;old_locus_tag=LPH58_02980 NZ_CP087690.1 Protein Homology CDS 709936 710397 . - 0 ID=cds-WP_038270971.1;Parent=gene-LPH58_RS02980;Dbxref=Genbank:WP_038270971.1;Name=WP_038270971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852439.1;locus_tag=LPH58_RS02980;product=hypothetical protein;protein_id=WP_038270971.1;transl_table=11 NZ_CP087690.1 RefSeq gene 711802 711885 . - . ID=gene-LPH58_RS02985;Name=LPH58_RS02985;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS02985;old_locus_tag=LPH58_02985 NZ_CP087690.1 tRNAscan-SE tRNA 711802 711885 . - . ID=rna-LPH58_RS02985;Parent=gene-LPH58_RS02985;anticodon=(pos:complement(711849..711851));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02985;product=tRNA-Leu NZ_CP087690.1 tRNAscan-SE exon 711802 711885 . - . ID=exon-LPH58_RS02985-1;Parent=rna-LPH58_RS02985;anticodon=(pos:complement(711849..711851));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS02985;product=tRNA-Leu NZ_CP087690.1 RefSeq gene 712293 713588 . + . ID=gene-LPH58_RS02990;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LPH58_RS02990;old_locus_tag=LPH58_02990 NZ_CP087690.1 Protein Homology CDS 712293 713588 . + 0 ID=cds-WP_038270973.1;Parent=gene-LPH58_RS02990;Dbxref=Genbank:WP_038270973.1;Name=WP_038270973.1;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852440.1;locus_tag=LPH58_RS02990;product=trigger factor;protein_id=WP_038270973.1;transl_table=11 NZ_CP087690.1 RefSeq gene 713735 714361 . + . ID=gene-LPH58_RS02995;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LPH58_RS02995;old_locus_tag=LPH58_02995 NZ_CP087690.1 Protein Homology CDS 713735 714361 . + 0 ID=cds-WP_038270975.1;Parent=gene-LPH58_RS02995;Dbxref=Genbank:WP_038270975.1;Name=WP_038270975.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002806026.1;locus_tag=LPH58_RS02995;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_038270975.1;transl_table=11 NZ_CP087690.1 RefSeq gene 714482 715762 . + . ID=gene-LPH58_RS03000;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LPH58_RS03000;old_locus_tag=LPH58_03000 NZ_CP087690.1 Protein Homology CDS 714482 715762 . + 0 ID=cds-WP_038270976.1;Parent=gene-LPH58_RS03000;Dbxref=Genbank:WP_038270976.1;Name=WP_038270976.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451747.1;locus_tag=LPH58_RS03000;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_038270976.1;transl_table=11 NZ_CP087690.1 RefSeq gene 715912 718380 . + . ID=gene-LPH58_RS03005;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LPH58_RS03005;old_locus_tag=LPH58_03005 NZ_CP087690.1 Protein Homology CDS 715912 718380 . + 0 ID=cds-WP_038270977.1;Parent=gene-LPH58_RS03005;Dbxref=Genbank:WP_038270977.1;Name=WP_038270977.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852269.1;locus_tag=LPH58_RS03005;product=endopeptidase La;protein_id=WP_038270977.1;transl_table=11 NZ_CP087690.1 RefSeq gene 718601 718885 . + . ID=gene-LPH58_RS03010;Name=LPH58_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03010;old_locus_tag=LPH58_03010 NZ_CP087690.1 Protein Homology CDS 718601 718885 . + 0 ID=cds-WP_038270979.1;Parent=gene-LPH58_RS03010;Dbxref=Genbank:WP_038270979.1;Name=WP_038270979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904732.1;locus_tag=LPH58_RS03010;product=HU family DNA-binding protein;protein_id=WP_038270979.1;transl_table=11 NZ_CP087690.1 RefSeq gene 718887 718961 . + . ID=gene-LPH58_RS03015;Name=LPH58_RS03015;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS03015;old_locus_tag=LPH58_03015 NZ_CP087690.1 tRNAscan-SE tRNA 718887 718961 . + . ID=rna-LPH58_RS03015;Parent=gene-LPH58_RS03015;anticodon=(pos:718919..718921);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS03015;product=tRNA-Val NZ_CP087690.1 tRNAscan-SE exon 718887 718961 . + . ID=exon-LPH58_RS03015-1;Parent=rna-LPH58_RS03015;anticodon=(pos:718919..718921);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS03015;product=tRNA-Val NZ_CP087690.1 RefSeq gene 718992 719068 . + . ID=gene-LPH58_RS03020;Name=LPH58_RS03020;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS03020;old_locus_tag=LPH58_03020 NZ_CP087690.1 tRNAscan-SE tRNA 718992 719068 . + . ID=rna-LPH58_RS03020;Parent=gene-LPH58_RS03020;anticodon=(pos:719026..719028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS03020;product=tRNA-Asp NZ_CP087690.1 tRNAscan-SE exon 718992 719068 . + . ID=exon-LPH58_RS03020-1;Parent=rna-LPH58_RS03020;anticodon=(pos:719026..719028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS03020;product=tRNA-Asp NZ_CP087690.1 RefSeq gene 719426 721393 . + . ID=gene-LPH58_RS03025;Name=LPH58_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03025;old_locus_tag=LPH58_03025 NZ_CP087690.1 Protein Homology CDS 719426 721393 . + 0 ID=cds-WP_038270981.1;Parent=gene-LPH58_RS03025;Dbxref=Genbank:WP_038270981.1;Name=WP_038270981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920425.1;locus_tag=LPH58_RS03025;product=peptidylprolyl isomerase;protein_id=WP_038270981.1;transl_table=11 NZ_CP087690.1 RefSeq gene 722174 723208 . + . ID=gene-LPH58_RS03030;Name=LPH58_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03030;old_locus_tag=LPH58_03030 NZ_CP087690.1 Protein Homology CDS 722174 723208 . + 0 ID=cds-WP_038270983.1;Parent=gene-LPH58_RS03030;Dbxref=Genbank:WP_038270983.1;Name=WP_038270983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086557.1;locus_tag=LPH58_RS03030;product=DUF475 domain-containing protein;protein_id=WP_038270983.1;transl_table=11 NZ_CP087690.1 RefSeq gene 725915 728386 . + . ID=gene-LPH58_RS03035;Name=LPH58_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03035;old_locus_tag=LPH58_03035 NZ_CP087690.1 Protein Homology CDS 725915 728386 . + 0 ID=cds-WP_038270984.1;Parent=gene-LPH58_RS03035;Dbxref=Genbank:WP_038270984.1;Name=WP_038270984.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893707.1;locus_tag=LPH58_RS03035;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_038270984.1;transl_table=11 NZ_CP087690.1 RefSeq gene 728463 729503 . + . ID=gene-LPH58_RS03040;Name=LPH58_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03040;old_locus_tag=LPH58_03040 NZ_CP087690.1 Protein Homology CDS 728463 729503 . + 0 ID=cds-WP_038270985.1;Parent=gene-LPH58_RS03040;Dbxref=Genbank:WP_038270985.1;Name=WP_038270985.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356462.1;locus_tag=LPH58_RS03040;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_038270985.1;transl_table=11 NZ_CP087690.1 RefSeq gene 729515 729997 . + . ID=gene-LPH58_RS03045;Name=LPH58_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03045;old_locus_tag=LPH58_03045 NZ_CP087690.1 Protein Homology CDS 729515 729997 . + 0 ID=cds-WP_038270986.1;Parent=gene-LPH58_RS03045;Dbxref=Genbank:WP_038270986.1;Name=WP_038270986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852453.1;locus_tag=LPH58_RS03045;product=flavodoxin;protein_id=WP_038270986.1;transl_table=11 NZ_CP087690.1 RefSeq gene 729969 730295 . + . ID=gene-LPH58_RS03050;Name=LPH58_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03050;old_locus_tag=LPH58_03050 NZ_CP087690.1 Protein Homology CDS 729969 730295 . + 0 ID=cds-WP_038270987.1;Parent=gene-LPH58_RS03050;Dbxref=Genbank:WP_038270987.1;Name=WP_038270987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156291.1;locus_tag=LPH58_RS03050;product=thioredoxin family protein;protein_id=WP_038270987.1;transl_table=11 NZ_CP087690.1 RefSeq gene 730328 730513 . - . ID=gene-LPH58_RS03055;Name=LPH58_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03055;old_locus_tag=LPH58_03055 NZ_CP087690.1 GeneMarkS-2+ CDS 730328 730513 . - 0 ID=cds-WP_038270988.1;Parent=gene-LPH58_RS03055;Dbxref=Genbank:WP_038270988.1;Name=WP_038270988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03055;product=hypothetical protein;protein_id=WP_038270988.1;transl_table=11 NZ_CP087690.1 RefSeq gene 731060 731185 . + . ID=gene-LPH58_RS11930;Name=LPH58_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11930 NZ_CP087690.1 GeneMarkS-2+ CDS 731060 731185 . + 0 ID=cds-WP_267903172.1;Parent=gene-LPH58_RS11930;Dbxref=Genbank:WP_267903172.1;Name=WP_267903172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11930;product=hypothetical protein;protein_id=WP_267903172.1;transl_table=11 NZ_CP087690.1 RefSeq gene 731268 731483 . + . ID=gene-LPH58_RS03060;Name=LPH58_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03060;old_locus_tag=LPH58_03060 NZ_CP087690.1 GeneMarkS-2+ CDS 731268 731483 . + 0 ID=cds-WP_152536602.1;Parent=gene-LPH58_RS03060;Dbxref=Genbank:WP_152536602.1;Name=WP_152536602.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03060;product=hypothetical protein;protein_id=WP_152536602.1;transl_table=11 NZ_CP087690.1 RefSeq gene 731802 732512 . + . ID=gene-LPH58_RS03065;Name=LPH58_RS03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03065;old_locus_tag=LPH58_03065 NZ_CP087690.1 Protein Homology CDS 731802 732512 . + 0 ID=cds-WP_038270990.1;Parent=gene-LPH58_RS03065;Dbxref=Genbank:WP_038270990.1;Name=WP_038270990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852452.1;locus_tag=LPH58_RS03065;product=16S rRNA pseudouridine(516) synthase;protein_id=WP_038270990.1;transl_table=11 NZ_CP087690.1 RefSeq gene 732509 733189 . + . ID=gene-LPH58_RS03070;Name=LPH58_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03070;old_locus_tag=LPH58_03070 NZ_CP087690.1 Protein Homology CDS 732509 733189 . + 0 ID=cds-WP_038270991.1;Parent=gene-LPH58_RS03070;Dbxref=Genbank:WP_038270991.1;Name=WP_038270991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893711.1;locus_tag=LPH58_RS03070;product=HAD family phosphatase;protein_id=WP_038270991.1;transl_table=11 NZ_CP087690.1 RefSeq gene 734042 734599 . - . ID=gene-LPH58_RS03075;Name=LPH58_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03075;old_locus_tag=LPH58_03075 NZ_CP087690.1 Protein Homology CDS 734042 734599 . - 0 ID=cds-WP_038270993.1;Parent=gene-LPH58_RS03075;Dbxref=Genbank:WP_038270993.1;Name=WP_038270993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086564.1;locus_tag=LPH58_RS03075;product=DUF1415 domain-containing protein;protein_id=WP_038270993.1;transl_table=11 NZ_CP087690.1 RefSeq gene 736358 736594 . + . ID=gene-LPH58_RS03080;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LPH58_RS03080;old_locus_tag=LPH58_03080 NZ_CP087690.1 Protein Homology CDS 736358 736594 . + 0 ID=cds-WP_038270994.1;Parent=gene-LPH58_RS03080;Dbxref=Genbank:WP_038270994.1;Name=WP_038270994.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185625.1;locus_tag=LPH58_RS03080;product=50S ribosomal protein L28;protein_id=WP_038270994.1;transl_table=11 NZ_CP087690.1 RefSeq gene 736605 736772 . + . ID=gene-LPH58_RS03085;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LPH58_RS03085;old_locus_tag=LPH58_03085 NZ_CP087690.1 Protein Homology CDS 736605 736772 . + 0 ID=cds-WP_171898073.1;Parent=gene-LPH58_RS03085;Dbxref=Genbank:WP_171898073.1;Name=WP_171898073.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001051801.1;locus_tag=LPH58_RS03085;product=50S ribosomal protein L33;protein_id=WP_171898073.1;transl_table=11 NZ_CP087690.1 RefSeq gene 736958 738361 . + . ID=gene-LPH58_RS03090;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LPH58_RS03090;old_locus_tag=LPH58_03090 NZ_CP087690.1 Protein Homology CDS 736958 738361 . + 0 ID=cds-WP_038270996.1;Parent=gene-LPH58_RS03090;Dbxref=Genbank:WP_038270996.1;Name=WP_038270996.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893717.1;locus_tag=LPH58_RS03090;product=cardiolipin synthase;protein_id=WP_038270996.1;transl_table=11 NZ_CP087690.1 RefSeq gene 739097 740116 . - . ID=gene-LPH58_RS03095;Name=LPH58_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03095;old_locus_tag=LPH58_03095 NZ_CP087690.1 Protein Homology CDS 739097 740116 . - 0 ID=cds-WP_038270998.1;Parent=gene-LPH58_RS03095;Dbxref=Genbank:WP_038270998.1;Name=WP_038270998.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852569.1;locus_tag=LPH58_RS03095;product=tyrosine-type recombinase/integrase;protein_id=WP_038270998.1;transl_table=11 NZ_CP087690.1 RefSeq gene 740116 740364 . - . ID=gene-LPH58_RS03100;Name=LPH58_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03100;old_locus_tag=LPH58_03100 NZ_CP087690.1 Protein Homology CDS 740116 740364 . - 0 ID=cds-WP_081755423.1;Parent=gene-LPH58_RS03100;Dbxref=Genbank:WP_081755423.1;Name=WP_081755423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852417.1;locus_tag=LPH58_RS03100;product=DUF4224 domain-containing protein;protein_id=WP_081755423.1;transl_table=11 NZ_CP087690.1 RefSeq gene 740419 740955 . - . ID=gene-LPH58_RS03105;Name=LPH58_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03105;old_locus_tag=LPH58_03105 NZ_CP087690.1 Protein Homology CDS 740419 740955 . - 0 ID=cds-WP_038273354.1-2;Parent=gene-LPH58_RS03105;Dbxref=Genbank:WP_038273354.1;Name=WP_038273354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH58_RS03105;product=pilin;protein_id=WP_038273354.1;transl_table=11 NZ_CP087690.1 RefSeq gene 740952 742337 . - . ID=gene-LPH58_RS03110;Name=LPH58_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03110;old_locus_tag=LPH58_03110 NZ_CP087690.1 Protein Homology CDS 740952 742337 . - 0 ID=cds-WP_114867068.1-2;Parent=gene-LPH58_RS03110;Dbxref=Genbank:WP_114867068.1;Name=WP_114867068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085030.1;locus_tag=LPH58_RS03110;product=DEAD/DEAH box helicase;protein_id=WP_114867068.1;transl_table=11 NZ_CP087690.1 RefSeq gene 742413 742697 . + . ID=gene-LPH58_RS03115;Name=LPH58_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03115;old_locus_tag=LPH58_03115 NZ_CP087690.1 Protein Homology CDS 742413 742697 . + 0 ID=cds-WP_114867078.1;Parent=gene-LPH58_RS03115;Dbxref=Genbank:WP_114867078.1;Name=WP_114867078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851619.1;locus_tag=LPH58_RS03115;product=DUF1640 domain-containing protein;protein_id=WP_114867078.1;transl_table=11 NZ_CP087690.1 RefSeq gene 742699 742971 . - . ID=gene-LPH58_RS03120;Name=LPH58_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03120;old_locus_tag=LPH58_03120 NZ_CP087690.1 Protein Homology CDS 742699 742971 . - 0 ID=cds-WP_114867070.1-2;Parent=gene-LPH58_RS03120;Dbxref=Genbank:WP_114867070.1;Name=WP_114867070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382732.1;locus_tag=LPH58_RS03120;product=VRR-NUC domain-containing protein;protein_id=WP_114867070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 742975 744168 . - . ID=gene-LPH58_RS03125;Name=LPH58_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03125;old_locus_tag=LPH58_03125 NZ_CP087690.1 GeneMarkS-2+ CDS 742975 744168 . - 0 ID=cds-WP_230428169.1;Parent=gene-LPH58_RS03125;Dbxref=Genbank:WP_230428169.1;Name=WP_230428169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03125;product=hypothetical protein;protein_id=WP_230428169.1;transl_table=11 NZ_CP087690.1 RefSeq gene 744125 744823 . + . ID=gene-LPH58_RS03130;Name=LPH58_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03130;old_locus_tag=LPH58_03130 NZ_CP087690.1 Protein Homology CDS 744125 744823 . + 0 ID=cds-WP_114867079.1;Parent=gene-LPH58_RS03130;Dbxref=Genbank:WP_114867079.1;Name=WP_114867079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852371.1;locus_tag=LPH58_RS03130;product=hypothetical protein;protein_id=WP_114867079.1;transl_table=11 NZ_CP087690.1 RefSeq gene 744884 745162 . + . ID=gene-LPH58_RS03135;Name=LPH58_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03135;old_locus_tag=LPH58_03135 NZ_CP087690.1 Protein Homology CDS 744884 745162 . + 0 ID=cds-WP_038273333.1;Parent=gene-LPH58_RS03135;Dbxref=Genbank:WP_038273333.1;Name=WP_038273333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083921.1;locus_tag=LPH58_RS03135;product=BrnT family toxin;protein_id=WP_038273333.1;transl_table=11 NZ_CP087690.1 RefSeq gene 745128 745439 . + . ID=gene-LPH58_RS03140;Name=LPH58_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03140;old_locus_tag=LPH58_03140 NZ_CP087690.1 Protein Homology CDS 745128 745439 . + 0 ID=cds-WP_038273331.1;Parent=gene-LPH58_RS03140;Dbxref=Genbank:WP_038273331.1;Name=WP_038273331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084245.1;locus_tag=LPH58_RS03140;product=BrnA antitoxin family protein;protein_id=WP_038273331.1;transl_table=11 NZ_CP087690.1 RefSeq gene 745660 746181 . + . ID=gene-LPH58_RS03145;Name=LPH58_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03145;old_locus_tag=LPH58_03145 NZ_CP087690.1 Protein Homology CDS 745660 746181 . + 0 ID=cds-WP_114867080.1;Parent=gene-LPH58_RS03145;Dbxref=Genbank:WP_114867080.1;Name=WP_114867080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853008.1;locus_tag=LPH58_RS03145;product=lysozyme;protein_id=WP_114867080.1;transl_table=11 NZ_CP087690.1 RefSeq gene 746174 746500 . + . ID=gene-LPH58_RS03150;Name=LPH58_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03150;old_locus_tag=LPH58_03150 NZ_CP087690.1 Protein Homology CDS 746174 746500 . + 0 ID=cds-WP_038272732.1;Parent=gene-LPH58_RS03150;Dbxref=Genbank:WP_038272732.1;Name=WP_038272732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852373.1;locus_tag=LPH58_RS03150;product=phage holin family protein;protein_id=WP_038272732.1;transl_table=11 NZ_CP087690.1 RefSeq gene 746490 746951 . + . ID=gene-LPH58_RS03155;Name=LPH58_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03155;old_locus_tag=LPH58_03155 NZ_CP087690.1 Protein Homology CDS 746490 746951 . + 0 ID=cds-WP_038272730.1;Parent=gene-LPH58_RS03155;Dbxref=Genbank:WP_038272730.1;Name=WP_038272730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086887.1;locus_tag=LPH58_RS03155;product=hypothetical protein;protein_id=WP_038272730.1;transl_table=11 NZ_CP087690.1 RefSeq gene 746953 747168 . + . ID=gene-LPH58_RS03160;Name=LPH58_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03160;old_locus_tag=LPH58_03160 NZ_CP087690.1 Protein Homology CDS 746953 747168 . + 0 ID=cds-WP_038272727.1;Parent=gene-LPH58_RS03160;Dbxref=Genbank:WP_038272727.1;Name=WP_038272727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085111.1;locus_tag=LPH58_RS03160;product=hypothetical protein;protein_id=WP_038272727.1;transl_table=11 NZ_CP087690.1 RefSeq gene 747179 747916 . + . ID=gene-LPH58_RS03165;Name=LPH58_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03165;old_locus_tag=LPH58_03165 NZ_CP087690.1 Protein Homology CDS 747179 747916 . + 0 ID=cds-WP_038272739.1;Parent=gene-LPH58_RS03165;Dbxref=Genbank:WP_038272739.1;Name=WP_038272739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085024.1;locus_tag=LPH58_RS03165;product=site-specific DNA-methyltransferase;protein_id=WP_038272739.1;transl_table=11 NZ_CP087690.1 RefSeq gene 747916 748140 . + . ID=gene-LPH58_RS03170;Name=LPH58_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03170;old_locus_tag=LPH58_03170 NZ_CP087690.1 Protein Homology CDS 747916 748140 . + 0 ID=cds-WP_038272724.1;Parent=gene-LPH58_RS03170;Dbxref=Genbank:WP_038272724.1;Name=WP_038272724.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039194.1;locus_tag=LPH58_RS03170;product=DUF5681 domain-containing protein;protein_id=WP_038272724.1;transl_table=11 NZ_CP087690.1 RefSeq gene 748149 748619 . + . ID=gene-LPH58_RS03175;Name=LPH58_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03175;old_locus_tag=LPH58_03175 NZ_CP087690.1 Protein Homology CDS 748149 748619 . + 0 ID=cds-WP_051482379.1;Parent=gene-LPH58_RS03175;Dbxref=Genbank:WP_051482379.1;Name=WP_051482379.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015211.2;locus_tag=LPH58_RS03175;product=terminase family protein;protein_id=WP_051482379.1;transl_table=11 NZ_CP087690.1 RefSeq gene 748743 749054 . + . ID=gene-LPH58_RS03180;Name=LPH58_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03180;old_locus_tag=LPH58_03180 NZ_CP087690.1 GeneMarkS-2+ CDS 748743 749054 . + 0 ID=cds-WP_038272721.1;Parent=gene-LPH58_RS03180;Dbxref=Genbank:WP_038272721.1;Name=WP_038272721.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03180;product=hypothetical protein;protein_id=WP_038272721.1;transl_table=11 NZ_CP087690.1 RefSeq gene 750205 750822 . + . ID=gene-LPH58_RS03185;Name=LPH58_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03185;old_locus_tag=LPH58_03185 NZ_CP087690.1 Protein Homology CDS 750205 750822 . + 0 ID=cds-WP_038272719.1;Parent=gene-LPH58_RS03185;Dbxref=Genbank:WP_038272719.1;Name=WP_038272719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090201.1;locus_tag=LPH58_RS03185;product=glutathione binding-like protein;protein_id=WP_038272719.1;transl_table=11 NZ_CP087690.1 RefSeq gene 750995 751981 . - . ID=gene-LPH58_RS03190;Name=LPH58_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03190;old_locus_tag=LPH58_03190 NZ_CP087690.1 Protein Homology CDS 750995 751981 . - 0 ID=cds-WP_038272716.1;Parent=gene-LPH58_RS03190;Dbxref=Genbank:WP_038272716.1;Name=WP_038272716.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003653591.1;locus_tag=LPH58_RS03190;product=malate dehydrogenase;protein_id=WP_038272716.1;transl_table=11 NZ_CP087690.1 RefSeq gene 752120 752614 . - . ID=gene-LPH58_RS03195;Name=LPH58_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03195;old_locus_tag=LPH58_03195 NZ_CP087690.1 Protein Homology CDS 752120 752614 . - 0 ID=cds-WP_038272714.1;Parent=gene-LPH58_RS03195;Dbxref=Genbank:WP_038272714.1;Name=WP_038272714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090205.1;locus_tag=LPH58_RS03195;product=peptidylprolyl isomerase;protein_id=WP_038272714.1;transl_table=11 NZ_CP087690.1 RefSeq gene 752848 754677 . + . ID=gene-LPH58_RS03200;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LPH58_RS03200;old_locus_tag=LPH58_03200 NZ_CP087690.1 Protein Homology CDS 752848 754677 . + 0 ID=cds-WP_038272712.1;Parent=gene-LPH58_RS03200;Dbxref=Genbank:WP_038272712.1;Name=WP_038272712.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904579.1;locus_tag=LPH58_RS03200;product=translational GTPase TypA;protein_id=WP_038272712.1;transl_table=11 NZ_CP087690.1 RefSeq gene 754697 755182 . + . ID=gene-LPH58_RS03205;Name=LPH58_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03205;old_locus_tag=LPH58_03205 NZ_CP087690.1 Protein Homology CDS 754697 755182 . + 0 ID=cds-WP_038272710.1;Parent=gene-LPH58_RS03205;Dbxref=Genbank:WP_038272710.1;Name=WP_038272710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300716.1;locus_tag=LPH58_RS03205;product=DUF2127 domain-containing protein;protein_id=WP_038272710.1;transl_table=11 NZ_CP087690.1 RefSeq gene 755481 755711 . + . ID=gene-LPH58_RS03210;Name=LPH58_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03210;old_locus_tag=LPH58_03210 NZ_CP087690.1 GeneMarkS-2+ CDS 755481 755711 . + 0 ID=cds-WP_152536658.1;Parent=gene-LPH58_RS03210;Dbxref=Genbank:WP_152536658.1;Name=WP_152536658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03210;product=hypothetical protein;protein_id=WP_152536658.1;transl_table=11 NZ_CP087690.1 RefSeq gene 755757 757019 . + . ID=gene-LPH58_RS03215;Name=LPH58_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03215;old_locus_tag=LPH58_03215 NZ_CP087690.1 Protein Homology CDS 755757 757019 . + 0 ID=cds-WP_038272708.1;Parent=gene-LPH58_RS03215;Dbxref=Genbank:WP_038272708.1;Name=WP_038272708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893724.1;locus_tag=LPH58_RS03215;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_038272708.1;transl_table=11 NZ_CP087690.1 RefSeq gene 757238 757471 . + . ID=gene-LPH58_RS03220;Name=LPH58_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03220;old_locus_tag=LPH58_03220 NZ_CP087690.1 Protein Homology CDS 757238 757471 . + 0 ID=cds-WP_230430678.1;Parent=gene-LPH58_RS03220;Dbxref=Genbank:WP_230430678.1;Name=WP_230430678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090213.1;locus_tag=LPH58_RS03220;product=hypothetical protein;protein_id=WP_230430678.1;transl_table=11 NZ_CP087690.1 RefSeq gene 757665 757955 . + . ID=gene-LPH58_RS03225;Name=LPH58_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03225;old_locus_tag=LPH58_03225 NZ_CP087690.1 Protein Homology CDS 757665 757955 . + 0 ID=cds-WP_230428171.1;Parent=gene-LPH58_RS03225;Dbxref=Genbank:WP_230428171.1;Name=WP_230428171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893726.1;locus_tag=LPH58_RS03225;product=hypothetical protein;protein_id=WP_230428171.1;transl_table=11 NZ_CP087690.1 RefSeq gene 758156 758419 . + . ID=gene-LPH58_RS03230;Name=LPH58_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03230;old_locus_tag=LPH58_03230 NZ_CP087690.1 Protein Homology CDS 758156 758419 . + 0 ID=cds-WP_081755482.1;Parent=gene-LPH58_RS03230;Dbxref=Genbank:WP_081755482.1;Name=WP_081755482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893727.1;locus_tag=LPH58_RS03230;product=hypothetical protein;protein_id=WP_081755482.1;transl_table=11 NZ_CP087690.1 RefSeq gene 758631 758861 . + . ID=gene-LPH58_RS03235;Name=LPH58_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03235;old_locus_tag=LPH58_03235 NZ_CP087690.1 GeneMarkS-2+ CDS 758631 758861 . + 0 ID=cds-WP_152536657.1;Parent=gene-LPH58_RS03235;Dbxref=Genbank:WP_152536657.1;Name=WP_152536657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03235;product=hypothetical protein;protein_id=WP_152536657.1;transl_table=11 NZ_CP087690.1 RefSeq gene 759299 761410 . + . ID=gene-LPH58_RS03240;Name=LPH58_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03240;old_locus_tag=LPH58_03240 NZ_CP087690.1 Protein Homology CDS 759299 761410 . + 0 ID=cds-WP_038272702.1;Parent=gene-LPH58_RS03240;Dbxref=Genbank:WP_038272702.1;Name=WP_038272702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090222.1;locus_tag=LPH58_RS03240;product=peptidase domain-containing ABC transporter;protein_id=WP_038272702.1;transl_table=11 NZ_CP087690.1 RefSeq gene 762417 763196 . - . ID=gene-LPH58_RS03245;Name=LPH58_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03245;old_locus_tag=LPH58_03245 NZ_CP087690.1 Protein Homology CDS 762417 763196 . - 0 ID=cds-WP_038272700.1;Parent=gene-LPH58_RS03245;Dbxref=Genbank:WP_038272700.1;Name=WP_038272700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893730.1;locus_tag=LPH58_RS03245;product=ABC transporter permease;protein_id=WP_038272700.1;transl_table=11 NZ_CP087690.1 RefSeq gene 763230 764210 . - . ID=gene-LPH58_RS03250;Name=LPH58_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03250;old_locus_tag=LPH58_03250 NZ_CP087690.1 Protein Homology CDS 763230 764210 . - 0 ID=cds-WP_051482378.1;Parent=gene-LPH58_RS03250;Dbxref=Genbank:WP_051482378.1;Name=WP_051482378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090226.1;locus_tag=LPH58_RS03250;product=ABC transporter ATP-binding protein;protein_id=WP_051482378.1;transl_table=11 NZ_CP087690.1 RefSeq gene 765187 768873 . + . ID=gene-LPH58_RS03255;Name=LPH58_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03255;old_locus_tag=LPH58_03255 NZ_CP087690.1 Protein Homology CDS 765187 768873 . + 0 ID=cds-WP_114867210.1;Parent=gene-LPH58_RS03255;Dbxref=Genbank:WP_114867210.1;Name=WP_114867210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097665.1;locus_tag=LPH58_RS03255;product=pilus assembly protein;protein_id=WP_114867210.1;transl_table=11 NZ_CP087690.1 RefSeq gene 769524 770000 . - . ID=gene-LPH58_RS03260;Name=LPH58_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03260;old_locus_tag=LPH58_03260 NZ_CP087690.1 Protein Homology CDS 769524 770000 . - 0 ID=cds-WP_038270586.1;Parent=gene-LPH58_RS03260;Dbxref=Genbank:WP_038270586.1;Name=WP_038270586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337698.1;locus_tag=LPH58_RS03260;product=hypothetical protein;protein_id=WP_038270586.1;transl_table=11 NZ_CP087690.1 RefSeq gene 771435 771824 . - . ID=gene-LPH58_RS03265;Name=LPH58_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03265;old_locus_tag=LPH58_03265 NZ_CP087690.1 Protein Homology CDS 771435 771824 . - 0 ID=cds-WP_038270588.1;Parent=gene-LPH58_RS03265;Dbxref=Genbank:WP_038270588.1;Name=WP_038270588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851560.1;locus_tag=LPH58_RS03265;product=hypothetical protein;protein_id=WP_038270588.1;transl_table=11 NZ_CP087690.1 RefSeq gene 772083 774584 . - . ID=gene-LPH58_RS03270;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=LPH58_RS03270;old_locus_tag=LPH58_03270 NZ_CP087690.1 Protein Homology CDS 772083 774584 . - 0 ID=cds-WP_038270589.1;Parent=gene-LPH58_RS03270;Dbxref=Genbank:WP_038270589.1;Name=WP_038270589.1;Ontology_term=GO:0006139,GO:0004386;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851559.1;locus_tag=LPH58_RS03270;product=ATP-dependent helicase HrpB;protein_id=WP_038270589.1;transl_table=11 NZ_CP087690.1 RefSeq gene 776183 776380 . - . ID=gene-LPH58_RS03275;Name=LPH58_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03275;old_locus_tag=LPH58_03275 NZ_CP087690.1 GeneMarkS-2+ CDS 776183 776380 . - 0 ID=cds-WP_038270591.1;Parent=gene-LPH58_RS03275;Dbxref=Genbank:WP_038270591.1;Name=WP_038270591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03275;product=hypothetical protein;protein_id=WP_038270591.1;transl_table=11 NZ_CP087690.1 RefSeq gene 776377 776859 . - . ID=gene-LPH58_RS03280;Name=LPH58_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03280;old_locus_tag=LPH58_03280 NZ_CP087690.1 Protein Homology CDS 776377 776859 . - 0 ID=cds-WP_038270592.1;Parent=gene-LPH58_RS03280;Dbxref=Genbank:WP_038270592.1;Name=WP_038270592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084082.1;locus_tag=LPH58_RS03280;product=GAF domain-containing protein;protein_id=WP_038270592.1;transl_table=11 NZ_CP087690.1 RefSeq gene 778051 779832 . + . ID=gene-LPH58_RS03285;Name=LPH58_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03285;old_locus_tag=LPH58_03285 NZ_CP087690.1 Protein Homology CDS 778051 779832 . + 0 ID=cds-WP_051482268.1;Parent=gene-LPH58_RS03285;Dbxref=Genbank:WP_051482268.1;Name=WP_051482268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260618.1;locus_tag=LPH58_RS03285;product=autotransporter assembly complex protein TamA;protein_id=WP_051482268.1;transl_table=11 NZ_CP087690.1 RefSeq gene 779883 783665 . + . ID=gene-LPH58_RS03290;Name=LPH58_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03290;old_locus_tag=LPH58_03290 NZ_CP087690.1 Protein Homology CDS 779883 783665 . + 0 ID=cds-WP_230428275.1;Parent=gene-LPH58_RS03290;Dbxref=Genbank:WP_230428275.1;Name=WP_230428275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087207.1;locus_tag=LPH58_RS03290;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_230428275.1;transl_table=11 NZ_CP087690.1 RefSeq gene 784740 785639 . + . ID=gene-LPH58_RS03295;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=LPH58_RS03295;old_locus_tag=LPH58_03295 NZ_CP087690.1 Protein Homology CDS 784740 785639 . + 0 ID=cds-WP_038270595.1;Parent=gene-LPH58_RS03295;Dbxref=Genbank:WP_038270595.1;Name=WP_038270595.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337702.1;locus_tag=LPH58_RS03295;product=methylisocitrate lyase;protein_id=WP_038270595.1;transl_table=11 NZ_CP087690.1 RefSeq gene 785728 786069 . - . ID=gene-LPH58_RS03300;Name=LPH58_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03300;old_locus_tag=LPH58_03300 NZ_CP087690.1 GeneMarkS-2+ CDS 785728 786069 . - 0 ID=cds-WP_051482270.1;Parent=gene-LPH58_RS03300;Dbxref=Genbank:WP_051482270.1;Name=WP_051482270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03300;product=hypothetical protein;protein_id=WP_051482270.1;transl_table=11 NZ_CP087690.1 RefSeq gene 785981 786520 . + . ID=gene-LPH58_RS03305;Name=LPH58_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03305;old_locus_tag=LPH58_03305 NZ_CP087690.1 Protein Homology CDS 785981 786520 . + 0 ID=cds-WP_081755406.1;Parent=gene-LPH58_RS03305;Dbxref=Genbank:WP_081755406.1;Name=WP_081755406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012506.2;locus_tag=LPH58_RS03305;product=hypothetical protein;protein_id=WP_081755406.1;transl_table=11 NZ_CP087690.1 RefSeq gene 786523 786648 . + . ID=gene-LPH58_RS11935;Name=LPH58_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11935 NZ_CP087690.1 GeneMarkS-2+ CDS 786523 786648 . + 0 ID=cds-WP_267903173.1;Parent=gene-LPH58_RS11935;Dbxref=Genbank:WP_267903173.1;Name=WP_267903173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11935;product=hypothetical protein;protein_id=WP_267903173.1;transl_table=11 NZ_CP087690.1 RefSeq gene 786645 789269 . + . ID=gene-LPH58_RS03310;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=LPH58_RS03310;old_locus_tag=LPH58_03310 NZ_CP087690.1 Protein Homology CDS 786645 789269 . + 0 ID=cds-WP_038270597.1;Parent=gene-LPH58_RS03310;Dbxref=Genbank:WP_038270597.1;Name=WP_038270597.1;Ontology_term=GO:0019629,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849833.1;locus_tag=LPH58_RS03310;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_038270597.1;transl_table=11 NZ_CP087690.1 RefSeq gene 789637 790833 . + . ID=gene-LPH58_RS03315;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=LPH58_RS03315;old_locus_tag=LPH58_03315 NZ_CP087690.1 Protein Homology CDS 789637 790833 . + 0 ID=cds-WP_038270598.1;Parent=gene-LPH58_RS03315;Dbxref=Genbank:WP_038270598.1;Name=WP_038270598.1;Ontology_term=GO:0019629;gbkey=CDS;gene=prpF;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097671.1;locus_tag=LPH58_RS03315;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_038270598.1;transl_table=11 NZ_CP087690.1 RefSeq gene 791079 791207 . + . ID=gene-LPH58_RS11940;Name=LPH58_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11940 NZ_CP087690.1 GeneMarkS-2+ CDS 791079 791207 . + 0 ID=cds-WP_267903174.1;Parent=gene-LPH58_RS11940;Dbxref=Genbank:WP_267903174.1;Name=WP_267903174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11940;product=hypothetical protein;protein_id=WP_267903174.1;transl_table=11 NZ_CP087690.1 RefSeq gene 793125 794036 . - . ID=gene-LPH58_RS03320;Name=LPH58_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03320;old_locus_tag=LPH58_03320 NZ_CP087690.1 Protein Homology CDS 793125 794036 . - 0 ID=cds-WP_230428172.1;Parent=gene-LPH58_RS03320;Dbxref=Genbank:WP_230428172.1;Name=WP_230428172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087380.1;locus_tag=LPH58_RS03320;product=hypothetical protein;protein_id=WP_230428172.1;transl_table=11 NZ_CP087690.1 RefSeq gene 794059 794241 . - . ID=gene-LPH58_RS03325;Name=LPH58_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03325;old_locus_tag=LPH58_03325 NZ_CP087690.1 GeneMarkS-2+ CDS 794059 794241 . - 0 ID=cds-WP_152536584.1;Parent=gene-LPH58_RS03325;Dbxref=Genbank:WP_152536584.1;Name=WP_152536584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03325;product=hypothetical protein;protein_id=WP_152536584.1;transl_table=11 NZ_CP087690.1 RefSeq gene 794461 794649 . + . ID=gene-LPH58_RS03330;Name=LPH58_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03330;old_locus_tag=LPH58_03330 NZ_CP087690.1 GeneMarkS-2+ CDS 794461 794649 . + 0 ID=cds-WP_038270600.1;Parent=gene-LPH58_RS03330;Dbxref=Genbank:WP_038270600.1;Name=WP_038270600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03330;product=hypothetical protein;protein_id=WP_038270600.1;transl_table=11 NZ_CP087690.1 RefSeq gene 794999 799924 . + . ID=gene-LPH58_RS03335;Name=LPH58_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03335;old_locus_tag=LPH58_03335 NZ_CP087690.1 Protein Homology CDS 794999 799924 . + 0 ID=cds-WP_038270601.1;Parent=gene-LPH58_RS03335;Dbxref=Genbank:WP_038270601.1;Name=WP_038270601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337707.1;locus_tag=LPH58_RS03335;product=alpha-2-macroglobulin;protein_id=WP_038270601.1;transl_table=11 NZ_CP087690.1 RefSeq gene 800474 800740 . - . ID=gene-LPH58_RS03340;Name=LPH58_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03340;old_locus_tag=LPH58_03340 NZ_CP087690.1 Protein Homology CDS 800474 800740 . - 0 ID=cds-WP_038270602.1;Parent=gene-LPH58_RS03340;Dbxref=Genbank:WP_038270602.1;Name=WP_038270602.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014624.2;locus_tag=LPH58_RS03340;product=metal-sensing transcriptional repressor;protein_id=WP_038270602.1;transl_table=11 NZ_CP087690.1 RefSeq gene 800753 801553 . - . ID=gene-LPH58_RS03345;Name=LPH58_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03345;old_locus_tag=LPH58_03345 NZ_CP087690.1 Protein Homology CDS 800753 801553 . - 0 ID=cds-WP_038270603.1;Parent=gene-LPH58_RS03345;Dbxref=Genbank:WP_038270603.1;Name=WP_038270603.1;Ontology_term=GO:0035444,GO:0015099;gbkey=CDS;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010953868.1;locus_tag=LPH58_RS03345;product=nickel/cobalt efflux transporter;protein_id=WP_038270603.1;transl_table=11 NZ_CP087690.1 RefSeq gene 802555 803568 . - . ID=gene-LPH58_RS03350;Name=LPH58_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03350;old_locus_tag=LPH58_03350 NZ_CP087690.1 Protein Homology CDS 802555 803568 . - 0 ID=cds-WP_038270604.1;Parent=gene-LPH58_RS03350;Dbxref=Genbank:WP_038270604.1;Name=WP_038270604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087377.1;locus_tag=LPH58_RS03350;product=alpha/beta hydrolase;protein_id=WP_038270604.1;transl_table=11 NZ_CP087690.1 RefSeq gene 803793 804662 . + . ID=gene-LPH58_RS03355;Name=LPH58_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03355;old_locus_tag=LPH58_03355 NZ_CP087690.1 Protein Homology CDS 803793 804662 . + 0 ID=cds-WP_038270605.1;Parent=gene-LPH58_RS03355;Dbxref=Genbank:WP_038270605.1;Name=WP_038270605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852361.1;locus_tag=LPH58_RS03355;product=AraC family transcriptional regulator;protein_id=WP_038270605.1;transl_table=11 NZ_CP087690.1 RefSeq gene 805880 806041 . - . ID=gene-LPH58_RS03360;Name=LPH58_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03360;old_locus_tag=LPH58_03360 NZ_CP087690.1 GeneMarkS-2+ CDS 805880 806041 . - 0 ID=cds-WP_160165137.1;Parent=gene-LPH58_RS03360;Dbxref=Genbank:WP_160165137.1;Name=WP_160165137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03360;product=hypothetical protein;protein_id=WP_160165137.1;transl_table=11 NZ_CP087690.1 RefSeq gene 807705 808037 . - . ID=gene-LPH58_RS03365;Name=LPH58_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03365;old_locus_tag=LPH58_03365 NZ_CP087690.1 Protein Homology CDS 807705 808037 . - 0 ID=cds-WP_038270606.1;Parent=gene-LPH58_RS03365;Dbxref=Genbank:WP_038270606.1;Name=WP_038270606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010671321.1;locus_tag=LPH58_RS03365;product=hypothetical protein;protein_id=WP_038270606.1;transl_table=11 NZ_CP087690.1 RefSeq gene 808034 809050 . - . ID=gene-LPH58_RS03370;Name=LPH58_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03370;old_locus_tag=LPH58_03370 NZ_CP087690.1 Protein Homology CDS 808034 809050 . - 0 ID=cds-WP_038270607.1;Parent=gene-LPH58_RS03370;Dbxref=Genbank:WP_038270607.1;Name=WP_038270607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_263987317.1;locus_tag=LPH58_RS03370;product=M4 family metallopeptidase;protein_id=WP_038270607.1;transl_table=11 NZ_CP087690.1 RefSeq gene 810074 810655 . + . ID=gene-LPH58_RS03375;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LPH58_RS03375;old_locus_tag=LPH58_03375 NZ_CP087690.1 Protein Homology CDS 810074 810655 . + 0 ID=cds-WP_038270608.1;Parent=gene-LPH58_RS03375;Dbxref=Genbank:WP_038270608.1;Name=WP_038270608.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852363.1;locus_tag=LPH58_RS03375;product=oligoribonuclease;protein_id=WP_038270608.1;transl_table=11 NZ_CP087690.1 RefSeq gene 810829 811776 . - . ID=gene-LPH58_RS03380;Name=LPH58_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03380;old_locus_tag=LPH58_03380 NZ_CP087690.1 Protein Homology CDS 810829 811776 . - 0 ID=cds-WP_038270610.1;Parent=gene-LPH58_RS03380;Dbxref=Genbank:WP_038270610.1;Name=WP_038270610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084046.1;locus_tag=LPH58_RS03380;product=mechanosensitive ion channel family protein;protein_id=WP_038270610.1;transl_table=11 NZ_CP087690.1 RefSeq gene 811776 814151 . - . ID=gene-LPH58_RS03385;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LPH58_RS03385;old_locus_tag=LPH58_03385 NZ_CP087690.1 Protein Homology CDS 811776 814151 . - 0 ID=cds-WP_038270703.1;Parent=gene-LPH58_RS03385;Dbxref=Genbank:WP_038270703.1;Name=WP_038270703.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097678.1;locus_tag=LPH58_RS03385;product=phosphoenolpyruvate synthase;protein_id=WP_038270703.1;transl_table=11 NZ_CP087690.1 RefSeq gene 814299 815120 . + . ID=gene-LPH58_RS03390;Name=LPH58_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03390;old_locus_tag=LPH58_03390 NZ_CP087690.1 Protein Homology CDS 814299 815120 . + 0 ID=cds-WP_038270611.1;Parent=gene-LPH58_RS03390;Dbxref=Genbank:WP_038270611.1;Name=WP_038270611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037311.1;locus_tag=LPH58_RS03390;product=kinase/pyrophosphorylase;protein_id=WP_038270611.1;transl_table=11 NZ_CP087690.1 RefSeq gene 815232 815705 . + . ID=gene-LPH58_RS03395;Name=LPH58_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03395;old_locus_tag=LPH58_03395 NZ_CP087690.1 Protein Homology CDS 815232 815705 . + 0 ID=cds-WP_038270612.1;Parent=gene-LPH58_RS03395;Dbxref=Genbank:WP_038270612.1;Name=WP_038270612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010342959.1;locus_tag=LPH58_RS03395;product=DUF1249 domain-containing protein;protein_id=WP_038270612.1;transl_table=11 NZ_CP087690.1 RefSeq gene 815773 816261 . + . ID=gene-LPH58_RS03400;Name=LPH58_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03400;old_locus_tag=LPH58_03400 NZ_CP087690.1 Protein Homology CDS 815773 816261 . + 0 ID=cds-WP_038270613.1;Parent=gene-LPH58_RS03400;Dbxref=Genbank:WP_038270613.1;Name=WP_038270613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012511421.1;locus_tag=LPH58_RS03400;product=8-oxo-dGTP diphosphatase;protein_id=WP_038270613.1;transl_table=11 NZ_CP087690.1 RefSeq gene 816874 819054 . - . ID=gene-LPH58_RS03405;Name=LPH58_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03405;old_locus_tag=LPH58_03405 NZ_CP087690.1 Protein Homology CDS 816874 819054 . - 0 ID=cds-WP_038270614.1;Parent=gene-LPH58_RS03405;Dbxref=Genbank:WP_038270614.1;Name=WP_038270614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337710.1;locus_tag=LPH58_RS03405;product=autotransporter domain-containing protein;protein_id=WP_038270614.1;transl_table=11 NZ_CP087690.1 RefSeq gene 821091 822401 . - . ID=gene-LPH58_RS03410;Name=LPH58_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03410;old_locus_tag=LPH58_03410 NZ_CP087690.1 Protein Homology CDS 821091 822401 . - 0 ID=cds-WP_038270615.1;Parent=gene-LPH58_RS03410;Dbxref=Genbank:WP_038270615.1;Name=WP_038270615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893784.1;locus_tag=LPH58_RS03410;product=DUF445 domain-containing protein;protein_id=WP_038270615.1;transl_table=11 NZ_CP087690.1 RefSeq gene 823884 824378 . - . ID=gene-LPH58_RS03415;Name=LPH58_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03415;old_locus_tag=LPH58_03415 NZ_CP087690.1 Protein Homology CDS 823884 824378 . - 0 ID=cds-WP_038270618.1;Parent=gene-LPH58_RS03415;Dbxref=Genbank:WP_038270618.1;Name=WP_038270618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852801.1;locus_tag=LPH58_RS03415;product=phasin family protein;protein_id=WP_038270618.1;transl_table=11 NZ_CP087690.1 RefSeq gene 824894 825694 . + . ID=gene-LPH58_RS03420;Name=LPH58_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03420;old_locus_tag=LPH58_03420 NZ_CP087690.1 Protein Homology CDS 824894 825694 . + 0 ID=cds-WP_038270619.1;Parent=gene-LPH58_RS03420;Dbxref=Genbank:WP_038270619.1;Name=WP_038270619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904651.1;locus_tag=LPH58_RS03420;product=FHA domain-containing protein;protein_id=WP_038270619.1;transl_table=11 NZ_CP087690.1 RefSeq gene 826404 826682 . + . ID=gene-LPH58_RS03425;Name=LPH58_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03425;old_locus_tag=LPH58_03425 NZ_CP087690.1 Protein Homology CDS 826404 826682 . + 0 ID=cds-WP_038270621.1;Parent=gene-LPH58_RS03425;Dbxref=Genbank:WP_038270621.1;Name=WP_038270621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852798.1;locus_tag=LPH58_RS03425;product=DUF493 family protein;protein_id=WP_038270621.1;transl_table=11 NZ_CP087690.1 RefSeq gene 826736 827371 . + . ID=gene-LPH58_RS03430;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LPH58_RS03430;old_locus_tag=LPH58_03430 NZ_CP087690.1 Protein Homology CDS 826736 827371 . + 0 ID=cds-WP_230428276.1;Parent=gene-LPH58_RS03430;Dbxref=Genbank:WP_230428276.1;Name=WP_230428276.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084036.1;locus_tag=LPH58_RS03430;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_230428276.1;transl_table=11 NZ_CP087690.1 RefSeq gene 827388 828398 . + . ID=gene-LPH58_RS03435;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LPH58_RS03435;old_locus_tag=LPH58_03435 NZ_CP087690.1 Protein Homology CDS 827388 828398 . + 0 ID=cds-WP_038270623.1;Parent=gene-LPH58_RS03435;Dbxref=Genbank:WP_038270623.1;Name=WP_038270623.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090539.1;locus_tag=LPH58_RS03435;product=lipoyl synthase;protein_id=WP_038270623.1;transl_table=11 NZ_CP087690.1 RefSeq gene 828946 829128 . + . ID=gene-LPH58_RS03440;Name=LPH58_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03440;old_locus_tag=LPH58_03440 NZ_CP087690.1 GeneMarkS-2+ CDS 828946 829128 . + 0 ID=cds-WP_038270624.1;Parent=gene-LPH58_RS03440;Dbxref=Genbank:WP_038270624.1;Name=WP_038270624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03440;product=hypothetical protein;protein_id=WP_038270624.1;transl_table=11 NZ_CP087690.1 RefSeq gene 829691 830179 . + . ID=gene-LPH58_RS03445;Name=LPH58_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03445;old_locus_tag=LPH58_03445 NZ_CP087690.1 GeneMarkS-2+ CDS 829691 830179 . + 0 ID=cds-WP_051482272.1;Parent=gene-LPH58_RS03445;Dbxref=Genbank:WP_051482272.1;Name=WP_051482272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03445;product=hypothetical protein;protein_id=WP_051482272.1;transl_table=11 NZ_CP087690.1 RefSeq gene 830558 830716 . + . ID=gene-LPH58_RS03450;Name=LPH58_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03450;old_locus_tag=LPH58_03450 NZ_CP087690.1 GeneMarkS-2+ CDS 830558 830716 . + 0 ID=cds-WP_160165139.1;Parent=gene-LPH58_RS03450;Dbxref=Genbank:WP_160165139.1;Name=WP_160165139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03450;product=hypothetical protein;protein_id=WP_160165139.1;transl_table=11 NZ_CP087690.1 RefSeq gene 831130 831588 . + . ID=gene-LPH58_RS03455;Name=LPH58_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03455;old_locus_tag=LPH58_03455 NZ_CP087690.1 GeneMarkS-2+ CDS 831130 831588 . + 0 ID=cds-WP_200866182.1;Parent=gene-LPH58_RS03455;Dbxref=Genbank:WP_200866182.1;Name=WP_200866182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03455;product=hypothetical protein;protein_id=WP_200866182.1;transl_table=11 NZ_CP087690.1 RefSeq gene 831585 831917 . + . ID=gene-LPH58_RS03460;Name=LPH58_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03460;old_locus_tag=LPH58_03460 NZ_CP087690.1 GeneMarkS-2+ CDS 831585 831917 . + 0 ID=cds-WP_200866183.1;Parent=gene-LPH58_RS03460;Dbxref=Genbank:WP_200866183.1;Name=WP_200866183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03460;product=hypothetical protein;protein_id=WP_200866183.1;transl_table=11 NZ_CP087690.1 RefSeq gene 832221 833534 . - . ID=gene-LPH58_RS03465;Name=LPH58_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03465;old_locus_tag=LPH58_03465 NZ_CP087690.1 Protein Homology CDS 832221 833534 . - 0 ID=cds-WP_038270626.1;Parent=gene-LPH58_RS03465;Dbxref=Genbank:WP_038270626.1;Name=WP_038270626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051102.1;locus_tag=LPH58_RS03465;product=hemolysin family protein;protein_id=WP_038270626.1;transl_table=11 NZ_CP087690.1 RefSeq gene 834217 835728 . - . ID=gene-LPH58_RS03470;Name=LPH58_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03470;old_locus_tag=LPH58_03470 NZ_CP087690.1 Protein Homology CDS 834217 835728 . - 0 ID=cds-WP_038270627.1;Parent=gene-LPH58_RS03470;Dbxref=Genbank:WP_038270627.1;Name=WP_038270627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893788.1;locus_tag=LPH58_RS03470;product=S10 family peptidase;protein_id=WP_038270627.1;transl_table=11 NZ_CP087690.1 RefSeq gene 835729 835926 . + . ID=gene-LPH58_RS03475;Name=LPH58_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03475;old_locus_tag=LPH58_03475 NZ_CP087690.1 GeneMarkS-2+ CDS 835729 835926 . + 0 ID=cds-WP_162814085.1;Parent=gene-LPH58_RS03475;Dbxref=Genbank:WP_162814085.1;Name=WP_162814085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03475;product=hypothetical protein;protein_id=WP_162814085.1;transl_table=11 NZ_CP087690.1 RefSeq gene 836880 838769 . - . ID=gene-LPH58_RS03480;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LPH58_RS03480;old_locus_tag=LPH58_03480 NZ_CP087690.1 Protein Homology CDS 836880 838769 . - 0 ID=cds-WP_038270628.1;Parent=gene-LPH58_RS03480;Dbxref=Genbank:WP_038270628.1;Name=WP_038270628.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237730.1;locus_tag=LPH58_RS03480;product=DNA topoisomerase IV subunit B;protein_id=WP_038270628.1;transl_table=11 NZ_CP087690.1 RefSeq gene 838944 839246 . + . ID=gene-LPH58_RS03485;Name=LPH58_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03485;old_locus_tag=LPH58_03485 NZ_CP087690.1 GeneMarkS-2+ CDS 838944 839246 . + 0 ID=cds-WP_230428173.1;Parent=gene-LPH58_RS03485;Dbxref=Genbank:WP_230428173.1;Name=WP_230428173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03485;product=hypothetical protein;protein_id=WP_230428173.1;transl_table=11 NZ_CP087690.1 RefSeq gene 839395 841059 . + . ID=gene-LPH58_RS03490;Name=LPH58_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03490;old_locus_tag=LPH58_03490 NZ_CP087690.1 Protein Homology CDS 839395 841059 . + 0 ID=cds-WP_038270629.1;Parent=gene-LPH58_RS03490;Dbxref=Genbank:WP_038270629.1;Name=WP_038270629.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851538.1;locus_tag=LPH58_RS03490;product=CTP synthase;protein_id=WP_038270629.1;transl_table=11 NZ_CP087690.1 RefSeq gene 841201 842031 . + . ID=gene-LPH58_RS03495;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LPH58_RS03495;old_locus_tag=LPH58_03495 NZ_CP087690.1 Protein Homology CDS 841201 842031 . + 0 ID=cds-WP_038270707.1;Parent=gene-LPH58_RS03495;Dbxref=Genbank:WP_038270707.1;Name=WP_038270707.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893795.1;locus_tag=LPH58_RS03495;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_038270707.1;transl_table=11 NZ_CP087690.1 RefSeq gene 842664 843956 . + . ID=gene-LPH58_RS03500;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LPH58_RS03500;old_locus_tag=LPH58_03500 NZ_CP087690.1 Protein Homology CDS 842664 843956 . + 0 ID=cds-WP_038270631.1;Parent=gene-LPH58_RS03500;Dbxref=Genbank:WP_038270631.1;Name=WP_038270631.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808113.1;locus_tag=LPH58_RS03500;product=phosphopyruvate hydratase;protein_id=WP_038270631.1;transl_table=11 NZ_CP087690.1 RefSeq gene 843960 844316 . + . ID=gene-LPH58_RS03505;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LPH58_RS03505;old_locus_tag=LPH58_03505 NZ_CP087690.1 Protein Homology CDS 843960 844316 . + 0 ID=cds-WP_038270632.1;Parent=gene-LPH58_RS03505;Dbxref=Genbank:WP_038270632.1;Name=WP_038270632.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097688.1;locus_tag=LPH58_RS03505;product=cell division protein FtsB;protein_id=WP_038270632.1;transl_table=11 NZ_CP087690.1 RefSeq gene 844313 845008 . + . ID=gene-LPH58_RS03510;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LPH58_RS03510;old_locus_tag=LPH58_03510 NZ_CP087690.1 Protein Homology CDS 844313 845008 . + 0 ID=cds-WP_038270634.1;Parent=gene-LPH58_RS03510;Dbxref=Genbank:WP_038270634.1;Name=WP_038270634.1;Ontology_term=GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893799.1;locus_tag=LPH58_RS03510;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_038270634.1;transl_table=11 NZ_CP087690.1 RefSeq gene 845036 845539 . + . ID=gene-LPH58_RS03515;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LPH58_RS03515;old_locus_tag=LPH58_03515 NZ_CP087690.1 Protein Homology CDS 845036 845539 . + 0 ID=cds-WP_038270708.1;Parent=gene-LPH58_RS03515;Dbxref=Genbank:WP_038270708.1;Name=WP_038270708.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090564.1;locus_tag=LPH58_RS03515;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_038270708.1;transl_table=11 NZ_CP087690.1 RefSeq gene 845760 846302 . - . ID=gene-LPH58_RS03520;Name=LPH58_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03520;old_locus_tag=LPH58_03520 NZ_CP087690.1 Protein Homology CDS 845760 846302 . - 0 ID=cds-WP_038270636.1;Parent=gene-LPH58_RS03520;Dbxref=Genbank:WP_038270636.1;Name=WP_038270636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237727.1;locus_tag=LPH58_RS03520;product=Smr/MutS family protein;protein_id=WP_038270636.1;transl_table=11 NZ_CP087690.1 RefSeq gene 846935 847957 . - . ID=gene-LPH58_RS03525;Name=LPH58_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03525;old_locus_tag=LPH58_03525 NZ_CP087690.1 Protein Homology CDS 846935 847957 . - 0 ID=cds-WP_038270637.1;Parent=gene-LPH58_RS03525;Dbxref=Genbank:WP_038270637.1;Name=WP_038270637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090566.1;locus_tag=LPH58_RS03525;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_038270637.1;transl_table=11 NZ_CP087690.1 RefSeq gene 848558 850204 . - . ID=gene-LPH58_RS03530;Name=LPH58_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03530;old_locus_tag=LPH58_03530 NZ_CP087690.1 Protein Homology CDS 848558 850204 . - 0 ID=cds-WP_038270639.1;Parent=gene-LPH58_RS03530;Dbxref=Genbank:WP_038270639.1;Name=WP_038270639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083995.1;locus_tag=LPH58_RS03530;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_038270639.1;transl_table=11 NZ_CP087690.1 RefSeq gene 850311 850895 . + . ID=gene-LPH58_RS03535;Name=LPH58_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03535;old_locus_tag=LPH58_03535 NZ_CP087690.1 Protein Homology CDS 850311 850895 . + 0 ID=cds-WP_038270710.1;Parent=gene-LPH58_RS03535;Dbxref=Genbank:WP_038270710.1;Name=WP_038270710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851530.1;locus_tag=LPH58_RS03535;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_038270710.1;transl_table=11 NZ_CP087690.1 RefSeq gene 851108 851749 . - . ID=gene-LPH58_RS03540;Name=LPH58_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03540;old_locus_tag=LPH58_03540 NZ_CP087690.1 Protein Homology CDS 851108 851749 . - 0 ID=cds-WP_038270640.1;Parent=gene-LPH58_RS03540;Dbxref=Genbank:WP_038270640.1;Name=WP_038270640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035875.1;locus_tag=LPH58_RS03540;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_038270640.1;transl_table=11 NZ_CP087690.1 RefSeq gene 851746 852672 . - . ID=gene-LPH58_RS03545;Name=LPH58_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03545;old_locus_tag=LPH58_03545 NZ_CP087690.1 Protein Homology CDS 851746 852672 . - 0 ID=cds-WP_038270642.1;Parent=gene-LPH58_RS03545;Dbxref=Genbank:WP_038270642.1;Name=WP_038270642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903957.1;locus_tag=LPH58_RS03545;product=MlaD family protein;protein_id=WP_038270642.1;transl_table=11 NZ_CP087690.1 RefSeq gene 852676 853515 . - . ID=gene-LPH58_RS03550;Name=LPH58_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03550;old_locus_tag=LPH58_03550 NZ_CP087690.1 Protein Homology CDS 852676 853515 . - 0 ID=cds-WP_038270643.1;Parent=gene-LPH58_RS03550;Dbxref=Genbank:WP_038270643.1;Name=WP_038270643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090576.1;locus_tag=LPH58_RS03550;product=ABC transporter ATP-binding protein;protein_id=WP_038270643.1;transl_table=11 NZ_CP087690.1 RefSeq gene 853520 854638 . - . ID=gene-LPH58_RS03555;Name=LPH58_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03555;old_locus_tag=LPH58_03555 NZ_CP087690.1 Protein Homology CDS 853520 854638 . - 0 ID=cds-WP_038270644.1;Parent=gene-LPH58_RS03555;Dbxref=Genbank:WP_038270644.1;Name=WP_038270644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090577.1;locus_tag=LPH58_RS03555;product=ABC transporter permease;protein_id=WP_038270644.1;transl_table=11 NZ_CP087690.1 RefSeq gene 854775 856034 . + . ID=gene-LPH58_RS03560;Name=LPH58_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03560;old_locus_tag=LPH58_03560 NZ_CP087690.1 Protein Homology CDS 854775 856034 . + 0 ID=cds-WP_038270645.1;Parent=gene-LPH58_RS03560;Dbxref=Genbank:WP_038270645.1;Name=WP_038270645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090578.1;locus_tag=LPH58_RS03560;product=threonine/serine exporter family protein;protein_id=WP_038270645.1;transl_table=11 NZ_CP087690.1 RefSeq gene 856366 856539 . + . ID=gene-LPH58_RS03565;Name=LPH58_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03565;old_locus_tag=LPH58_03565 NZ_CP087690.1 Protein Homology CDS 856366 856539 . + 0 ID=cds-WP_171898045.1;Parent=gene-LPH58_RS03565;Dbxref=Genbank:WP_171898045.1;Name=WP_171898045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090579.1;locus_tag=LPH58_RS03565;product=hypothetical protein;protein_id=WP_171898045.1;transl_table=11 NZ_CP087690.1 RefSeq gene 856596 856763 . + . ID=gene-LPH58_RS03570;Name=LPH58_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03570;old_locus_tag=LPH58_03570 NZ_CP087690.1 GeneMarkS-2+ CDS 856596 856763 . + 0 ID=cds-WP_160165141.1;Parent=gene-LPH58_RS03570;Dbxref=Genbank:WP_160165141.1;Name=WP_160165141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03570;product=hypothetical protein;protein_id=WP_160165141.1;transl_table=11 NZ_CP087690.1 RefSeq gene 856818 856970 . + . ID=gene-LPH58_RS03575;Name=LPH58_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03575;old_locus_tag=LPH58_03575 NZ_CP087690.1 GeneMarkS-2+ CDS 856818 856970 . + 0 ID=cds-WP_162814086.1;Parent=gene-LPH58_RS03575;Dbxref=Genbank:WP_162814086.1;Name=WP_162814086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03575;product=hypothetical protein;protein_id=WP_162814086.1;transl_table=11 NZ_CP087690.1 RefSeq gene 857026 857247 . + . ID=gene-LPH58_RS03580;Name=LPH58_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03580;old_locus_tag=LPH58_03580 NZ_CP087690.1 GeneMarkS-2+ CDS 857026 857247 . + 0 ID=cds-WP_152536585.1;Parent=gene-LPH58_RS03580;Dbxref=Genbank:WP_152536585.1;Name=WP_152536585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03580;product=hypothetical protein;protein_id=WP_152536585.1;transl_table=11 NZ_CP087690.1 RefSeq gene 857311 857520 . + . ID=gene-LPH58_RS03585;Name=LPH58_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03585;old_locus_tag=LPH58_03585 NZ_CP087690.1 GeneMarkS-2+ CDS 857311 857520 . + 0 ID=cds-WP_152536586.1;Parent=gene-LPH58_RS03585;Dbxref=Genbank:WP_152536586.1;Name=WP_152536586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03585;product=hypothetical protein;protein_id=WP_152536586.1;transl_table=11 NZ_CP087690.1 RefSeq gene 857572 857814 . + . ID=gene-LPH58_RS03590;Name=LPH58_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03590;old_locus_tag=LPH58_03590 NZ_CP087690.1 GeneMarkS-2+ CDS 857572 857814 . + 0 ID=cds-WP_038270646.1;Parent=gene-LPH58_RS03590;Dbxref=Genbank:WP_038270646.1;Name=WP_038270646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03590;product=hypothetical protein;protein_id=WP_038270646.1;transl_table=11 NZ_CP087690.1 RefSeq gene 857840 858055 . + . ID=gene-LPH58_RS03595;Name=LPH58_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03595;old_locus_tag=LPH58_03595 NZ_CP087690.1 GeneMarkS-2+ CDS 857840 858055 . + 0 ID=cds-WP_162814087.1;Parent=gene-LPH58_RS03595;Dbxref=Genbank:WP_162814087.1;Name=WP_162814087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03595;product=hypothetical protein;protein_id=WP_162814087.1;transl_table=11 NZ_CP087690.1 RefSeq gene 858518 858769 . + . ID=gene-LPH58_RS03600;Name=LPH58_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03600;old_locus_tag=LPH58_03600 NZ_CP087690.1 Protein Homology CDS 858518 858769 . + 0 ID=cds-WP_069636202.1;Parent=gene-LPH58_RS03600;Dbxref=Genbank:WP_069636202.1;Name=WP_069636202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337732.1;locus_tag=LPH58_RS03600;product=hypothetical protein;protein_id=WP_069636202.1;transl_table=11 NZ_CP087690.1 RefSeq gene 858779 859024 . + . ID=gene-LPH58_RS03605;Name=LPH58_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03605;old_locus_tag=LPH58_03605 NZ_CP087690.1 Protein Homology CDS 858779 859024 . + 0 ID=cds-WP_230430824.1;Parent=gene-LPH58_RS03605;Dbxref=Genbank:WP_230430824.1;Name=WP_230430824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090583.1;locus_tag=LPH58_RS03605;product=hypothetical protein;protein_id=WP_230430824.1;transl_table=11 NZ_CP087690.1 RefSeq gene 859079 859375 . + . ID=gene-LPH58_RS03610;Name=LPH58_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03610;old_locus_tag=LPH58_03610 NZ_CP087690.1 Protein Homology CDS 859079 859375 . + 0 ID=cds-WP_038270714.1;Parent=gene-LPH58_RS03610;Dbxref=Genbank:WP_038270714.1;Name=WP_038270714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084250.1;locus_tag=LPH58_RS03610;product=hypothetical protein;protein_id=WP_038270714.1;transl_table=11 NZ_CP087690.1 RefSeq gene 859454 859723 . + . ID=gene-LPH58_RS03615;Name=LPH58_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03615;old_locus_tag=LPH58_03615 NZ_CP087690.1 Protein Homology CDS 859454 859723 . + 0 ID=cds-WP_038270647.1;Parent=gene-LPH58_RS03615;Dbxref=Genbank:WP_038270647.1;Name=WP_038270647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098067.1;locus_tag=LPH58_RS03615;product=hypothetical protein;protein_id=WP_038270647.1;transl_table=11 NZ_CP087690.1 RefSeq gene 860936 861979 . + . ID=gene-LPH58_RS03620;Name=LPH58_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03620;old_locus_tag=LPH58_03620 NZ_CP087690.1 Protein Homology CDS 860936 861979 . + 0 ID=cds-WP_038270648.1;Parent=gene-LPH58_RS03620;Dbxref=Genbank:WP_038270648.1;Name=WP_038270648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083920.1;locus_tag=LPH58_RS03620;product=rod shape-determining protein;protein_id=WP_038270648.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 862175 863005 . + . ID=gene-LPH58_RS03625;Name=mreC;end_range=863005,.;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=LPH58_RS03625;old_locus_tag=LPH58_03625;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 862175 863005 . + 0 ID=cds-LPH58_RS03625;Parent=gene-LPH58_RS03625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008360;end_range=863005,.;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089324.1;locus_tag=LPH58_RS03625;partial=true;product=rod shape-determining protein MreC;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 863137 863622 . + . ID=gene-LPH58_RS03630;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LPH58_RS03630;old_locus_tag=LPH58_03630 NZ_CP087690.1 Protein Homology CDS 863137 863622 . + 0 ID=cds-WP_038270649.1;Parent=gene-LPH58_RS03630;Dbxref=Genbank:WP_038270649.1;Name=WP_038270649.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911183.1;locus_tag=LPH58_RS03630;product=rod shape-determining protein MreD;protein_id=WP_038270649.1;transl_table=11 NZ_CP087690.1 RefSeq gene 863627 865690 . + . ID=gene-LPH58_RS03635;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LPH58_RS03635;old_locus_tag=LPH58_03635 NZ_CP087690.1 Protein Homology CDS 863627 865690 . + 0 ID=cds-WP_038270715.1;Parent=gene-LPH58_RS03635;Dbxref=Genbank:WP_038270715.1;Name=WP_038270715.1;Ontology_term=GO:0009252,GO:0003824;gbkey=CDS;gene=mrdA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851765.1;locus_tag=LPH58_RS03635;product=penicillin-binding protein 2;protein_id=WP_038270715.1;transl_table=11 NZ_CP087690.1 RefSeq gene 865687 866808 . + . ID=gene-LPH58_RS03640;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LPH58_RS03640;old_locus_tag=LPH58_03640 NZ_CP087690.1 Protein Homology CDS 865687 866808 . + 0 ID=cds-WP_038270650.1;Parent=gene-LPH58_RS03640;Dbxref=Genbank:WP_038270650.1;Name=WP_038270650.1;Ontology_term=GO:0008360;gbkey=CDS;gene=rodA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159496.1;locus_tag=LPH58_RS03640;product=rod shape-determining protein RodA;protein_id=WP_038270650.1;transl_table=11 NZ_CP087690.1 RefSeq gene 866909 867949 . + . ID=gene-LPH58_RS03645;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LPH58_RS03645;old_locus_tag=LPH58_03645 NZ_CP087690.1 Protein Homology CDS 866909 867949 . + 0 ID=cds-WP_038270651.1;Parent=gene-LPH58_RS03645;Dbxref=Genbank:WP_038270651.1;Name=WP_038270651.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851767.1;locus_tag=LPH58_RS03645;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_038270651.1;transl_table=11 NZ_CP087690.1 RefSeq gene 869080 871203 . + . ID=gene-LPH58_RS03650;Name=LPH58_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03650;old_locus_tag=LPH58_03650 NZ_CP087690.1 Protein Homology CDS 869080 871203 . + 0 ID=cds-WP_171898046.1;Parent=gene-LPH58_RS03650;Dbxref=Genbank:WP_171898046.1;Name=WP_171898046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852820.1;locus_tag=LPH58_RS03650;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_171898046.1;transl_table=11 NZ_CP087690.1 RefSeq gene 871308 872819 . + . ID=gene-LPH58_RS03655;Name=LPH58_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03655;old_locus_tag=LPH58_03655 NZ_CP087690.1 Protein Homology CDS 871308 872819 . + 0 ID=cds-WP_038270654.1;Parent=gene-LPH58_RS03655;Dbxref=Genbank:WP_038270654.1;Name=WP_038270654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851769.1;locus_tag=LPH58_RS03655;product=hypothetical protein;protein_id=WP_038270654.1;transl_table=11 NZ_CP087690.1 RefSeq gene 873271 873774 . - . ID=gene-LPH58_RS03660;Name=LPH58_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03660;old_locus_tag=LPH58_03660 NZ_CP087690.1 Protein Homology CDS 873271 873774 . - 0 ID=cds-WP_038270655.1;Parent=gene-LPH58_RS03660;Dbxref=Genbank:WP_038270655.1;Name=WP_038270655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851771.1;locus_tag=LPH58_RS03660;product=hypothetical protein;protein_id=WP_038270655.1;transl_table=11 NZ_CP087690.1 RefSeq gene 873835 874092 . - . ID=gene-LPH58_RS03665;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LPH58_RS03665;old_locus_tag=LPH58_03665 NZ_CP087690.1 Protein Homology CDS 873835 874092 . - 0 ID=cds-WP_038270656.1;Parent=gene-LPH58_RS03665;Dbxref=Genbank:WP_038270656.1;Name=WP_038270656.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036323.1;locus_tag=LPH58_RS03665;product=cell division topological specificity factor MinE;protein_id=WP_038270656.1;transl_table=11 NZ_CP087690.1 RefSeq gene 874095 874904 . - . ID=gene-LPH58_RS03670;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LPH58_RS03670;old_locus_tag=LPH58_03670 NZ_CP087690.1 Protein Homology CDS 874095 874904 . - 0 ID=cds-WP_038270657.1;Parent=gene-LPH58_RS03670;Dbxref=Genbank:WP_038270657.1;Name=WP_038270657.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006424120.1;locus_tag=LPH58_RS03670;product=septum site-determining protein MinD;protein_id=WP_038270657.1;transl_table=11 NZ_CP087690.1 RefSeq gene 874941 875669 . - . ID=gene-LPH58_RS03675;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LPH58_RS03675;old_locus_tag=LPH58_03675 NZ_CP087690.1 Protein Homology CDS 874941 875669 . - 0 ID=cds-WP_038270658.1;Parent=gene-LPH58_RS03675;Dbxref=Genbank:WP_038270658.1;Name=WP_038270658.1;Ontology_term=GO:0000918,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007973818.1;locus_tag=LPH58_RS03675;product=septum site-determining protein MinC;protein_id=WP_038270658.1;transl_table=11 NZ_CP087690.1 RefSeq gene 875684 876262 . - . ID=gene-LPH58_RS03680;Name=LPH58_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03680;old_locus_tag=LPH58_03680 NZ_CP087690.1 Protein Homology CDS 875684 876262 . - 0 ID=cds-WP_038270659.1;Parent=gene-LPH58_RS03680;Dbxref=Genbank:WP_038270659.1;Name=WP_038270659.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090598.1;locus_tag=LPH58_RS03680;product=GNAT family N-acetyltransferase;protein_id=WP_038270659.1;transl_table=11 NZ_CP087690.1 RefSeq gene 876332 876481 . - . ID=gene-LPH58_RS03685;Name=LPH58_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03685;old_locus_tag=LPH58_03685 NZ_CP087690.1 GeneMarkS-2+ CDS 876332 876481 . - 0 ID=cds-WP_160165143.1;Parent=gene-LPH58_RS03685;Dbxref=Genbank:WP_160165143.1;Name=WP_160165143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03685;product=hypothetical protein;protein_id=WP_160165143.1;transl_table=11 NZ_CP087690.1 RefSeq gene 877178 878350 . + . ID=gene-LPH58_RS03690;Name=LPH58_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03690;old_locus_tag=LPH58_03690 NZ_CP087690.1 Protein Homology CDS 877178 878350 . + 0 ID=cds-WP_038270660.1;Parent=gene-LPH58_RS03690;Dbxref=Genbank:WP_038270660.1;Name=WP_038270660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851774.1;locus_tag=LPH58_RS03690;product=SRPBCC family protein;protein_id=WP_038270660.1;transl_table=11 NZ_CP087690.1 RefSeq gene 878655 879326 . + . ID=gene-LPH58_RS03695;Name=LPH58_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03695;old_locus_tag=LPH58_03695 NZ_CP087690.1 Protein Homology CDS 878655 879326 . + 0 ID=cds-WP_038270661.1;Parent=gene-LPH58_RS03695;Dbxref=Genbank:WP_038270661.1;Name=WP_038270661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005989995.1;locus_tag=LPH58_RS03695;product=DNA-3-methyladenine glycosylase;protein_id=WP_038270661.1;transl_table=11 NZ_CP087690.1 RefSeq gene 879727 880293 . - . ID=gene-LPH58_RS03700;Name=LPH58_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03700;old_locus_tag=LPH58_03700 NZ_CP087690.1 Protein Homology CDS 879727 880293 . - 0 ID=cds-WP_038270662.1;Parent=gene-LPH58_RS03700;Dbxref=Genbank:WP_038270662.1;Name=WP_038270662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893832.1;locus_tag=LPH58_RS03700;product=YceI family protein;protein_id=WP_038270662.1;transl_table=11 NZ_CP087690.1 RefSeq gene 880304 880870 . - . ID=gene-LPH58_RS03705;Name=LPH58_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03705;old_locus_tag=LPH58_03705 NZ_CP087690.1 Protein Homology CDS 880304 880870 . - 0 ID=cds-WP_038270663.1;Parent=gene-LPH58_RS03705;Dbxref=Genbank:WP_038270663.1;Name=WP_038270663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893833.1;locus_tag=LPH58_RS03705;product=cytochrome b;protein_id=WP_038270663.1;transl_table=11 NZ_CP087690.1 RefSeq gene 880882 881586 . - . ID=gene-LPH58_RS03710;Name=LPH58_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03710;old_locus_tag=LPH58_03710 NZ_CP087690.1 Protein Homology CDS 880882 881586 . - 0 ID=cds-WP_069636203.1;Parent=gene-LPH58_RS03710;Dbxref=Genbank:WP_069636203.1;Name=WP_069636203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893834.1;locus_tag=LPH58_RS03710;product=YceI family protein;protein_id=WP_069636203.1;transl_table=11 NZ_CP087690.1 RefSeq gene 881679 885251 . + . ID=gene-LPH58_RS03715;Name=LPH58_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03715;old_locus_tag=LPH58_03715 NZ_CP087690.1 Protein Homology CDS 881679 885251 . + 0 ID=cds-WP_038270665.1;Parent=gene-LPH58_RS03715;Dbxref=Genbank:WP_038270665.1;Name=WP_038270665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851779.1;locus_tag=LPH58_RS03715;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_038270665.1;transl_table=11 NZ_CP087690.1 RefSeq gene 885958 886254 . + . ID=gene-LPH58_RS03720;Name=LPH58_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03720;old_locus_tag=LPH58_03720 NZ_CP087690.1 GeneMarkS-2+ CDS 885958 886254 . + 0 ID=cds-WP_160199301.1;Parent=gene-LPH58_RS03720;Dbxref=Genbank:WP_160199301.1;Name=WP_160199301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03720;product=hypothetical protein;protein_id=WP_160199301.1;transl_table=11 NZ_CP087690.1 RefSeq gene 886539 887603 . - . ID=gene-LPH58_RS03725;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LPH58_RS03725;old_locus_tag=LPH58_03725 NZ_CP087690.1 Protein Homology CDS 886539 887603 . - 0 ID=cds-WP_038270667.1;Parent=gene-LPH58_RS03725;Dbxref=Genbank:WP_038270667.1;Name=WP_038270667.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407863.1;locus_tag=LPH58_RS03725;product=uroporphyrinogen decarboxylase;protein_id=WP_038270667.1;transl_table=11 NZ_CP087690.1 RefSeq gene 888019 889131 . - . ID=gene-LPH58_RS03730;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LPH58_RS03730;old_locus_tag=LPH58_03730 NZ_CP087690.1 Protein Homology CDS 888019 889131 . - 0 ID=cds-WP_038270668.1;Parent=gene-LPH58_RS03730;Dbxref=Genbank:WP_038270668.1;Name=WP_038270668.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851784.1;locus_tag=LPH58_RS03730;product=3-dehydroquinate synthase;protein_id=WP_038270668.1;transl_table=11 NZ_CP087690.1 RefSeq gene 889128 889670 . - . ID=gene-LPH58_RS03735;Name=LPH58_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03735;old_locus_tag=LPH58_03735 NZ_CP087690.1 Protein Homology CDS 889128 889670 . - 0 ID=cds-WP_038270669.1;Parent=gene-LPH58_RS03735;Dbxref=Genbank:WP_038270669.1;Name=WP_038270669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005917545.1;locus_tag=LPH58_RS03735;product=shikimate kinase;protein_id=WP_038270669.1;transl_table=11 NZ_CP087690.1 RefSeq gene 889947 890546 . + . ID=gene-LPH58_RS03740;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LPH58_RS03740;old_locus_tag=LPH58_03740 NZ_CP087690.1 Protein Homology CDS 889947 890546 . + 0 ID=cds-WP_038270670.1;Parent=gene-LPH58_RS03740;Dbxref=Genbank:WP_038270670.1;Name=WP_038270670.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine-phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010381128.1;locus_tag=LPH58_RS03740;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_038270670.1;transl_table=11 NZ_CP087690.1 RefSeq gene 890732 890929 . + . ID=gene-LPH58_RS03745;Name=LPH58_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03745;old_locus_tag=LPH58_03745 NZ_CP087690.1 Protein Homology CDS 890732 890929 . + 0 ID=cds-WP_162814088.1;Parent=gene-LPH58_RS03745;Dbxref=Genbank:WP_162814088.1;Name=WP_162814088.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH58_RS03745;product=Tn3 family transposase;protein_id=WP_162814088.1;transl_table=11 NZ_CP087690.1 RefSeq gene 891433 893175 . - . ID=gene-LPH58_RS03750;Name=LPH58_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03750;old_locus_tag=LPH58_03750 NZ_CP087690.1 Protein Homology CDS 891433 893175 . - 0 ID=cds-WP_038270716.1;Parent=gene-LPH58_RS03750;Dbxref=Genbank:WP_038270716.1;Name=WP_038270716.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017915896.1;locus_tag=LPH58_RS03750;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_038270716.1;transl_table=11 NZ_CP087690.1 RefSeq gene 894003 894176 . + . ID=gene-LPH58_RS03755;Name=LPH58_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03755;old_locus_tag=LPH58_03755 NZ_CP087690.1 GeneMarkS-2+ CDS 894003 894176 . + 0 ID=cds-WP_160165144.1;Parent=gene-LPH58_RS03755;Dbxref=Genbank:WP_160165144.1;Name=WP_160165144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03755;product=hypothetical protein;protein_id=WP_160165144.1;transl_table=11 NZ_CP087690.1 RefSeq gene 894297 895031 . + . ID=gene-LPH58_RS03760;Name=LPH58_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03760;old_locus_tag=LPH58_03760 NZ_CP087690.1 Protein Homology CDS 894297 895031 . + 0 ID=cds-WP_038270676.1;Parent=gene-LPH58_RS03760;Dbxref=Genbank:WP_038270676.1;Name=WP_038270676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090628.1;locus_tag=LPH58_RS03760;product=copper homeostasis protein CutC;protein_id=WP_038270676.1;transl_table=11 NZ_CP087690.1 RefSeq gene 896400 896558 . + . ID=gene-LPH58_RS03765;Name=LPH58_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03765;old_locus_tag=LPH58_03765 NZ_CP087690.1 GeneMarkS-2+ CDS 896400 896558 . + 0 ID=cds-WP_160165146.1;Parent=gene-LPH58_RS03765;Dbxref=Genbank:WP_160165146.1;Name=WP_160165146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03765;product=hypothetical protein;protein_id=WP_160165146.1;transl_table=11 NZ_CP087690.1 RefSeq gene 896760 897005 . + . ID=gene-LPH58_RS03770;Name=LPH58_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03770;old_locus_tag=LPH58_03770 NZ_CP087690.1 Protein Homology CDS 896760 897005 . + 0 ID=cds-WP_230428174.1;Parent=gene-LPH58_RS03770;Dbxref=Genbank:WP_230428174.1;Name=WP_230428174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893847.1;locus_tag=LPH58_RS03770;product=hypothetical protein;protein_id=WP_230428174.1;transl_table=11 NZ_CP087690.1 RefSeq gene 897342 898445 . + . ID=gene-LPH58_RS03775;Name=LPH58_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03775;old_locus_tag=LPH58_03775 NZ_CP087690.1 Protein Homology CDS 897342 898445 . + 0 ID=cds-WP_038270679.1;Parent=gene-LPH58_RS03775;Dbxref=Genbank:WP_038270679.1;Name=WP_038270679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089499.1;locus_tag=LPH58_RS03775;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_038270679.1;transl_table=11 NZ_CP087690.1 RefSeq gene 898449 899309 . + . ID=gene-LPH58_RS03780;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LPH58_RS03780;old_locus_tag=LPH58_03780 NZ_CP087690.1 Protein Homology CDS 898449 899309 . + 0 ID=cds-WP_038270680.1;Parent=gene-LPH58_RS03780;Dbxref=Genbank:WP_038270680.1;Name=WP_038270680.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090632.1;locus_tag=LPH58_RS03780;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_038270680.1;transl_table=11 NZ_CP087690.1 RefSeq gene 899321 900265 . + . ID=gene-LPH58_RS03785;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LPH58_RS03785;old_locus_tag=LPH58_03785 NZ_CP087690.1 Protein Homology CDS 899321 900265 . + 0 ID=cds-WP_051482278.1;Parent=gene-LPH58_RS03785;Dbxref=Genbank:WP_051482278.1;Name=WP_051482278.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014506838.1;locus_tag=LPH58_RS03785;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_051482278.1;transl_table=11 NZ_CP087690.1 RefSeq gene 900279 901325 . + . ID=gene-LPH58_RS03790;Name=LPH58_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03790;old_locus_tag=LPH58_03790 NZ_CP087690.1 Protein Homology CDS 900279 901325 . + 0 ID=cds-WP_038270717.1;Parent=gene-LPH58_RS03790;Dbxref=Genbank:WP_038270717.1;Name=WP_038270717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156238.1;locus_tag=LPH58_RS03790;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_038270717.1;transl_table=11 NZ_CP087690.1 RefSeq gene 902012 902608 . - . ID=gene-LPH58_RS03795;Name=LPH58_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03795;old_locus_tag=LPH58_03795 NZ_CP087690.1 Protein Homology CDS 902012 902608 . - 0 ID=cds-WP_162814073.1;Parent=gene-LPH58_RS03795;Dbxref=Genbank:WP_162814073.1;Name=WP_162814073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.2;locus_tag=LPH58_RS03795;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_162814073.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 902820 902876 . - . ID=gene-LPH58_RS03800;Name=LPH58_RS03800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS03800;old_locus_tag=LPH58_03800;partial=true;pseudo=true;start_range=.,902820 NZ_CP087690.1 Protein Homology CDS 902820 902876 . - 0 ID=cds-LPH58_RS03800;Parent=gene-LPH58_RS03800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017316.2;locus_tag=LPH58_RS03800;partial=true;product=phage tail protein;pseudo=true;start_range=.,902820;transl_table=11 NZ_CP087690.1 RefSeq gene 902873 903127 . - . ID=gene-LPH58_RS03805;Name=LPH58_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03805;old_locus_tag=LPH58_03805 NZ_CP087690.1 Protein Homology CDS 902873 903127 . - 0 ID=cds-WP_230428278.1;Parent=gene-LPH58_RS03805;Dbxref=Genbank:WP_230428278.1;Name=WP_230428278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018674.2;locus_tag=LPH58_RS03805;product=phage tail protein;protein_id=WP_230428278.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 903200 903604 . - . ID=gene-LPH58_RS03810;Name=LPH58_RS03810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS03810;old_locus_tag=LPH58_03810;pseudo=true NZ_CP087690.1 Protein Homology CDS 903200 903604 . - 0 ID=cds-LPH58_RS03810;Parent=gene-LPH58_RS03810;Note=internal stop;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01634.1;locus_tag=LPH58_RS03810;product=phage tail protein I;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 903675 904568 . - . ID=gene-LPH58_RS03815;Name=LPH58_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03815;old_locus_tag=LPH58_03815 NZ_CP087690.1 Protein Homology CDS 903675 904568 . - 0 ID=cds-WP_038270682.1;Parent=gene-LPH58_RS03815;Dbxref=Genbank:WP_038270682.1;Name=WP_038270682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893248.1;locus_tag=LPH58_RS03815;product=baseplate J/gp47 family protein;protein_id=WP_038270682.1;transl_table=11 NZ_CP087690.1 RefSeq gene 904568 904897 . - . ID=gene-LPH58_RS03820;Name=LPH58_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03820;old_locus_tag=LPH58_03820 NZ_CP087690.1 Protein Homology CDS 904568 904897 . - 0 ID=cds-WP_230428175.1;Parent=gene-LPH58_RS03820;Dbxref=Genbank:WP_230428175.1;Name=WP_230428175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088650.1;locus_tag=LPH58_RS03820;product=GPW/gp25 family protein;protein_id=WP_230428175.1;transl_table=11 NZ_CP087690.1 RefSeq gene 904998 905276 . + . ID=gene-LPH58_RS03825;Name=LPH58_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03825;old_locus_tag=LPH58_03825 NZ_CP087690.1 Protein Homology CDS 904998 905276 . + 0 ID=cds-WP_038270683.1;Parent=gene-LPH58_RS03825;Dbxref=Genbank:WP_038270683.1;Name=WP_038270683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010952670.1;locus_tag=LPH58_RS03825;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038270683.1;transl_table=11 NZ_CP087690.1 RefSeq gene 905280 905579 . + . ID=gene-LPH58_RS03830;Name=LPH58_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03830;old_locus_tag=LPH58_03830 NZ_CP087690.1 Protein Homology CDS 905280 905579 . + 0 ID=cds-WP_081755408.1;Parent=gene-LPH58_RS03830;Dbxref=Genbank:WP_081755408.1;Name=WP_081755408.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850959.1;locus_tag=LPH58_RS03830;product=HigA family addiction module antitoxin;protein_id=WP_081755408.1;transl_table=11 NZ_CP087690.1 RefSeq gene 905589 905885 . - . ID=gene-LPH58_RS03835;Name=LPH58_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03835;old_locus_tag=LPH58_03835 NZ_CP087690.1 Protein Homology CDS 905589 905885 . - 0 ID=cds-WP_230428176.1;Parent=gene-LPH58_RS03835;Dbxref=Genbank:WP_230428176.1;Name=WP_230428176.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=LPH58_RS03835;product=phage baseplate assembly protein V;protein_id=WP_230428176.1;transl_table=11 NZ_CP087690.1 RefSeq gene 905839 906048 . - . ID=gene-LPH58_RS03840;Name=LPH58_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03840;old_locus_tag=LPH58_03840 NZ_CP087690.1 Protein Homology CDS 905839 906048 . - 0 ID=cds-WP_230428177.1;Parent=gene-LPH58_RS03840;Dbxref=Genbank:WP_230428177.1;Name=WP_230428177.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:TIGR01644.1;locus_tag=LPH58_RS03840;product=phage baseplate assembly protein V;protein_id=WP_230428177.1;transl_table=11 NZ_CP087690.1 RefSeq gene 906048 906701 . - . ID=gene-LPH58_RS03845;Name=LPH58_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03845;old_locus_tag=LPH58_03845 NZ_CP087690.1 GeneMarkS-2+ CDS 906048 906701 . - 0 ID=cds-WP_230428178.1;Parent=gene-LPH58_RS03845;Dbxref=Genbank:WP_230428178.1;Name=WP_230428178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03845;product=hypothetical protein;protein_id=WP_230428178.1;transl_table=11 NZ_CP087690.1 RefSeq gene 906677 907126 . - . ID=gene-LPH58_RS03850;Name=LPH58_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03850;old_locus_tag=LPH58_03850 NZ_CP087690.1 Protein Homology CDS 906677 907126 . - 0 ID=cds-WP_230428179.1;Parent=gene-LPH58_RS03850;Dbxref=Genbank:WP_230428179.1;Name=WP_230428179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852727.1;locus_tag=LPH58_RS03850;product=hypothetical protein;protein_id=WP_230428179.1;transl_table=11 NZ_CP087690.1 RefSeq gene 907216 907509 . - . ID=gene-LPH58_RS03855;Name=LPH58_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03855;old_locus_tag=LPH58_03855 NZ_CP087690.1 GeneMarkS-2+ CDS 907216 907509 . - 0 ID=cds-WP_038270685.1;Parent=gene-LPH58_RS03855;Dbxref=Genbank:WP_038270685.1;Name=WP_038270685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03855;product=hypothetical protein;protein_id=WP_038270685.1;transl_table=11 NZ_CP087690.1 RefSeq gene 907490 907720 . - . ID=gene-LPH58_RS03860;Name=LPH58_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03860;old_locus_tag=LPH58_03860 NZ_CP087690.1 GeneMarkS-2+ CDS 907490 907720 . - 0 ID=cds-WP_230428500.1;Parent=gene-LPH58_RS03860;Dbxref=Genbank:WP_230428500.1;Name=WP_230428500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03860;product=hypothetical protein;protein_id=WP_230428500.1;transl_table=11 NZ_CP087690.1 RefSeq gene 907847 908095 . - . ID=gene-LPH58_RS03865;Name=LPH58_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03865;old_locus_tag=LPH58_03865 NZ_CP087690.1 GeneMarkS-2+ CDS 907847 908095 . - 0 ID=cds-WP_038270686.1;Parent=gene-LPH58_RS03865;Dbxref=Genbank:WP_038270686.1;Name=WP_038270686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03865;product=hypothetical protein;protein_id=WP_038270686.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 908134 909518 . - . ID=gene-LPH58_RS03870;Name=LPH58_RS03870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS03870;old_locus_tag=LPH58_03870;pseudo=true NZ_CP087690.1 Protein Homology CDS 908134 909518 . - 0 ID=cds-LPH58_RS03870;Parent=gene-LPH58_RS03870;Note=frameshifted%3B internal stop;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097617.1;locus_tag=LPH58_RS03870;product=phage major capsid protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 909617 910066 . - . ID=gene-LPH58_RS03875;Name=LPH58_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03875;old_locus_tag=LPH58_03875 NZ_CP087690.1 GeneMarkS-2+ CDS 909617 910066 . - 0 ID=cds-WP_230428180.1;Parent=gene-LPH58_RS03875;Dbxref=Genbank:WP_230428180.1;Name=WP_230428180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03875;product=hypothetical protein;protein_id=WP_230428180.1;transl_table=11 NZ_CP087690.1 RefSeq gene 910085 910726 . - . ID=gene-LPH58_RS03880;Name=LPH58_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03880;old_locus_tag=LPH58_03880 NZ_CP087690.1 Protein Homology CDS 910085 910726 . - 0 ID=cds-WP_038270687.1;Parent=gene-LPH58_RS03880;Dbxref=Genbank:WP_038270687.1;Name=WP_038270687.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.2;locus_tag=LPH58_RS03880;product=phage terminase large subunit family protein;protein_id=WP_038270687.1;transl_table=11 NZ_CP087690.1 RefSeq gene 910710 910916 . - . ID=gene-LPH58_RS03885;Name=LPH58_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03885;old_locus_tag=LPH58_03885 NZ_CP087690.1 Protein Homology CDS 910710 910916 . - 0 ID=cds-WP_038270689.1;Parent=gene-LPH58_RS03885;Dbxref=Genbank:WP_038270689.1;Name=WP_038270689.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017673.2;locus_tag=LPH58_RS03885;product=phage terminase large subunit family protein;protein_id=WP_038270689.1;transl_table=11 NZ_CP087690.1 RefSeq gene 911354 911659 . + . ID=gene-LPH58_RS03890;Name=LPH58_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03890;old_locus_tag=LPH58_03890 NZ_CP087690.1 GeneMarkS-2+ CDS 911354 911659 . + 0 ID=cds-WP_051482274.1;Parent=gene-LPH58_RS03890;Dbxref=Genbank:WP_051482274.1;Name=WP_051482274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03890;product=hypothetical protein;protein_id=WP_051482274.1;transl_table=11 NZ_CP087690.1 RefSeq gene 912039 912389 . - . ID=gene-LPH58_RS03895;Name=LPH58_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03895;old_locus_tag=LPH58_03895 NZ_CP087690.1 GeneMarkS-2+ CDS 912039 912389 . - 0 ID=cds-WP_230428181.1;Parent=gene-LPH58_RS03895;Dbxref=Genbank:WP_230428181.1;Name=WP_230428181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03895;product=hypothetical protein;protein_id=WP_230428181.1;transl_table=11 NZ_CP087690.1 RefSeq gene 912991 913323 . + . ID=gene-LPH58_RS03900;Name=LPH58_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03900;old_locus_tag=LPH58_03900 NZ_CP087690.1 Protein Homology CDS 912991 913323 . + 0 ID=cds-WP_038270693.1;Parent=gene-LPH58_RS03900;Dbxref=Genbank:WP_038270693.1;Name=WP_038270693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852216.1;locus_tag=LPH58_RS03900;product=hypothetical protein;protein_id=WP_038270693.1;transl_table=11 NZ_CP087690.1 RefSeq gene 913327 914154 . + . ID=gene-LPH58_RS03905;Name=LPH58_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03905;old_locus_tag=LPH58_03905 NZ_CP087690.1 Protein Homology CDS 913327 914154 . + 0 ID=cds-WP_038270695.1;Parent=gene-LPH58_RS03905;Dbxref=Genbank:WP_038270695.1;Name=WP_038270695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852217.1;locus_tag=LPH58_RS03905;product=DUF2303 family protein;protein_id=WP_038270695.1;transl_table=11 NZ_CP087690.1 RefSeq gene 914335 914712 . + . ID=gene-LPH58_RS03910;Name=LPH58_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03910;old_locus_tag=LPH58_03910 NZ_CP087690.1 GeneMarkS-2+ CDS 914335 914712 . + 0 ID=cds-WP_160199300.1;Parent=gene-LPH58_RS03910;Dbxref=Genbank:WP_160199300.1;Name=WP_160199300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03910;product=hypothetical protein;protein_id=WP_160199300.1;transl_table=11 NZ_CP087690.1 RefSeq gene 914716 915060 . + . ID=gene-LPH58_RS03915;Name=LPH58_RS03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03915;old_locus_tag=LPH58_03915 NZ_CP087690.1 Protein Homology CDS 914716 915060 . + 0 ID=cds-WP_038270697.1;Parent=gene-LPH58_RS03915;Dbxref=Genbank:WP_038270697.1;Name=WP_038270697.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024096.2;locus_tag=LPH58_RS03915;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_038270697.1;transl_table=11 NZ_CP087690.1 RefSeq gene 915070 915642 . + . ID=gene-LPH58_RS03920;Name=LPH58_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03920;old_locus_tag=LPH58_03920 NZ_CP087690.1 GeneMarkS-2+ CDS 915070 915642 . + 0 ID=cds-WP_051482276.1;Parent=gene-LPH58_RS03920;Dbxref=Genbank:WP_051482276.1;Name=WP_051482276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS03920;product=hypothetical protein;protein_id=WP_051482276.1;transl_table=11 NZ_CP087690.1 RefSeq gene 916296 917222 . - . ID=gene-LPH58_RS03925;Name=LPH58_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03925;old_locus_tag=LPH58_03925 NZ_CP087690.1 Protein Homology CDS 916296 917222 . - 0 ID=cds-WP_038270698.1;Parent=gene-LPH58_RS03925;Dbxref=Genbank:WP_038270698.1;Name=WP_038270698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484402.1;locus_tag=LPH58_RS03925;product=lauroyl acyltransferase;protein_id=WP_038270698.1;transl_table=11 NZ_CP087690.1 RefSeq gene 917620 919485 . + . ID=gene-LPH58_RS03930;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LPH58_RS03930;old_locus_tag=LPH58_03930 NZ_CP087690.1 Protein Homology CDS 917620 919485 . + 0 ID=cds-WP_038270699.1;Parent=gene-LPH58_RS03930;Dbxref=Genbank:WP_038270699.1;Name=WP_038270699.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157069.1;locus_tag=LPH58_RS03930;product=RNA polymerase sigma factor RpoD;protein_id=WP_038270699.1;transl_table=11 NZ_CP087690.1 RefSeq gene 922285 924534 . - . ID=gene-LPH58_RS03935;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LPH58_RS03935;old_locus_tag=LPH58_03935 NZ_CP087690.1 Protein Homology CDS 922285 924534 . - 0 ID=cds-WP_038272689.1;Parent=gene-LPH58_RS03935;Dbxref=Genbank:WP_038272689.1;Name=WP_038272689.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483492.1;locus_tag=LPH58_RS03935;product=DNA topoisomerase IV subunit A;protein_id=WP_038272689.1;transl_table=11 NZ_CP087690.1 RefSeq gene 924932 925363 . + . ID=gene-LPH58_RS03940;Name=LPH58_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03940;old_locus_tag=LPH58_03940 NZ_CP087690.1 Protein Homology CDS 924932 925363 . + 0 ID=cds-WP_038272687.1;Parent=gene-LPH58_RS03940;Dbxref=Genbank:WP_038272687.1;Name=WP_038272687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893858.1;locus_tag=LPH58_RS03940;product=MarR family transcriptional regulator;protein_id=WP_038272687.1;transl_table=11 NZ_CP087690.1 RefSeq gene 925360 926850 . + . ID=gene-LPH58_RS03945;Name=LPH58_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03945;old_locus_tag=LPH58_03945 NZ_CP087690.1 Protein Homology CDS 925360 926850 . + 0 ID=cds-WP_038272685.1;Parent=gene-LPH58_RS03945;Dbxref=Genbank:WP_038272685.1;Name=WP_038272685.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002810731.1;locus_tag=LPH58_RS03945;product=efflux transporter outer membrane subunit;protein_id=WP_038272685.1;transl_table=11 NZ_CP087690.1 RefSeq gene 926861 928039 . + . ID=gene-LPH58_RS03950;Name=LPH58_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03950;old_locus_tag=LPH58_03950 NZ_CP087690.1 Protein Homology CDS 926861 928039 . + 0 ID=cds-WP_038272696.1;Parent=gene-LPH58_RS03950;Dbxref=Genbank:WP_038272696.1;Name=WP_038272696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005408768.1;locus_tag=LPH58_RS03950;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038272696.1;transl_table=11 NZ_CP087690.1 RefSeq gene 928049 929614 . + . ID=gene-LPH58_RS03955;Name=LPH58_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03955;old_locus_tag=LPH58_03955 NZ_CP087690.1 Protein Homology CDS 928049 929614 . + 0 ID=cds-WP_051482376.1;Parent=gene-LPH58_RS03955;Dbxref=Genbank:WP_051482376.1;Name=WP_051482376.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510532.1;locus_tag=LPH58_RS03955;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_051482376.1;transl_table=11 NZ_CP087690.1 RefSeq gene 930315 931082 . - . ID=gene-LPH58_RS03960;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=LPH58_RS03960;old_locus_tag=LPH58_03960 NZ_CP087690.1 Protein Homology CDS 930315 931082 . - 0 ID=cds-WP_038272683.1;Parent=gene-LPH58_RS03960;Dbxref=Genbank:WP_038272683.1;Name=WP_038272683.1;Ontology_term=GO:0009102,GO:0003824;gbkey=CDS;gene=bioH;go_function=catalytic activity|0003824||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007968482.1;locus_tag=LPH58_RS03960;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_038272683.1;transl_table=11 NZ_CP087690.1 RefSeq gene 931238 932443 . - . ID=gene-LPH58_RS03965;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LPH58_RS03965;old_locus_tag=LPH58_03965 NZ_CP087690.1 Protein Homology CDS 931238 932443 . - 0 ID=cds-WP_038272681.1;Parent=gene-LPH58_RS03965;Dbxref=Genbank:WP_038272681.1;Name=WP_038272681.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090644.1;locus_tag=LPH58_RS03965;product=8-amino-7-oxononanoate synthase;protein_id=WP_038272681.1;transl_table=11 NZ_CP087690.1 RefSeq gene 933323 934486 . + . ID=gene-LPH58_RS03970;Name=LPH58_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03970;old_locus_tag=LPH58_03970 NZ_CP087690.1 Protein Homology CDS 933323 934486 . + 0 ID=cds-WP_038272676.1;Parent=gene-LPH58_RS03970;Dbxref=Genbank:WP_038272676.1;Name=WP_038272676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019238044.1;locus_tag=LPH58_RS03970;product=heme A synthase;protein_id=WP_038272676.1;transl_table=11 NZ_CP087690.1 RefSeq gene 934489 935388 . + . ID=gene-LPH58_RS03975;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LPH58_RS03975;old_locus_tag=LPH58_03975 NZ_CP087690.1 Protein Homology CDS 934489 935388 . + 0 ID=cds-WP_038272675.1;Parent=gene-LPH58_RS03975;Dbxref=Genbank:WP_038272675.1;Name=WP_038272675.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851978.1;locus_tag=LPH58_RS03975;product=heme o synthase;protein_id=WP_038272675.1;transl_table=11 NZ_CP087690.1 RefSeq gene 936328 937167 . + . ID=gene-LPH58_RS03980;Name=LPH58_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03980;old_locus_tag=LPH58_03980 NZ_CP087690.1 Protein Homology CDS 936328 937167 . + 0 ID=cds-WP_051482375.1;Parent=gene-LPH58_RS03980;Dbxref=Genbank:WP_051482375.1;Name=WP_051482375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851979.1;locus_tag=LPH58_RS03980;product=N-acyl homoserine lactonase family protein;protein_id=WP_051482375.1;transl_table=11 NZ_CP087690.1 RefSeq gene 937675 938925 . - . ID=gene-LPH58_RS03985;Name=LPH58_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03985;old_locus_tag=LPH58_03985 NZ_CP087690.1 Protein Homology CDS 937675 938925 . - 0 ID=cds-WP_038272671.1;Parent=gene-LPH58_RS03985;Dbxref=Genbank:WP_038272671.1;Name=WP_038272671.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851980.1;locus_tag=LPH58_RS03985;product=multifunctional CCA addition/repair protein;protein_id=WP_038272671.1;transl_table=11 NZ_CP087690.1 RefSeq gene 939009 940952 . - . ID=gene-LPH58_RS03990;Name=LPH58_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03990;old_locus_tag=LPH58_03990 NZ_CP087690.1 Protein Homology CDS 939009 940952 . - 0 ID=cds-WP_038272670.1;Parent=gene-LPH58_RS03990;Dbxref=Genbank:WP_038272670.1;Name=WP_038272670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090648.1;locus_tag=LPH58_RS03990;product=lytic transglycosylase domain-containing protein;protein_id=WP_038272670.1;transl_table=11 NZ_CP087690.1 RefSeq gene 942280 942702 . - . ID=gene-LPH58_RS03995;Name=LPH58_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS03995;old_locus_tag=LPH58_03995 NZ_CP087690.1 Protein Homology CDS 942280 942702 . - 0 ID=cds-WP_038272666.1;Parent=gene-LPH58_RS03995;Dbxref=Genbank:WP_038272666.1;Name=WP_038272666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018974490.1;locus_tag=LPH58_RS03995;product=cupin domain-containing protein;protein_id=WP_038272666.1;transl_table=11 NZ_CP087690.1 RefSeq gene 944358 945200 . - . ID=gene-LPH58_RS04000;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LPH58_RS04000;old_locus_tag=LPH58_04000 NZ_CP087690.1 Protein Homology CDS 944358 945200 . - 0 ID=cds-WP_114867088.1;Parent=gene-LPH58_RS04000;Dbxref=Genbank:WP_114867088.1;Name=WP_114867088.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097716.1;locus_tag=LPH58_RS04000;product=archaetidylserine decarboxylase;protein_id=WP_114867088.1;transl_table=11 NZ_CP087690.1 RefSeq gene 945197 945388 . - . ID=gene-LPH58_RS04005;Name=LPH58_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04005;old_locus_tag=LPH58_04005 NZ_CP087690.1 GeneMarkS-2+ CDS 945197 945388 . - 0 ID=cds-WP_114867089.1;Parent=gene-LPH58_RS04005;Dbxref=Genbank:WP_114867089.1;Name=WP_114867089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04005;product=hypothetical protein;protein_id=WP_114867089.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 945469 945917 . - . ID=gene-LPH58_RS04010;Name=LPH58_RS04010;end_range=945917,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS04010;old_locus_tag=LPH58_04010;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 945469 945917 . - 0 ID=cds-LPH58_RS04010;Parent=gene-LPH58_RS04010;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0000150,GO:0003677;end_range=945917,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1;locus_tag=LPH58_RS04010;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 945976 946803 . - . ID=gene-LPH58_RS04015;Name=LPH58_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04015;old_locus_tag=LPH58_04015 NZ_CP087690.1 GeneMarkS-2+ CDS 945976 946803 . - 0 ID=cds-WP_152536623.1;Parent=gene-LPH58_RS04015;Dbxref=Genbank:WP_152536623.1;Name=WP_152536623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04015;product=hypothetical protein;protein_id=WP_152536623.1;transl_table=11 NZ_CP087690.1 RefSeq gene 946872 947018 . - . ID=gene-LPH58_RS04020;Name=LPH58_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04020;old_locus_tag=LPH58_04020 NZ_CP087690.1 GeneMarkS-2+ CDS 946872 947018 . - 0 ID=cds-WP_160165183.1;Parent=gene-LPH58_RS04020;Dbxref=Genbank:WP_160165183.1;Name=WP_160165183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04020;product=hypothetical protein;protein_id=WP_160165183.1;transl_table=11 NZ_CP087690.1 RefSeq gene 947083 947421 . - . ID=gene-LPH58_RS04025;Name=LPH58_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04025;old_locus_tag=LPH58_04025 NZ_CP087690.1 GeneMarkS-2+ CDS 947083 947421 . - 0 ID=cds-WP_160199299.1;Parent=gene-LPH58_RS04025;Dbxref=Genbank:WP_160199299.1;Name=WP_160199299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04025;product=hypothetical protein;protein_id=WP_160199299.1;transl_table=11 NZ_CP087690.1 RefSeq gene 947807 948286 . - . ID=gene-LPH58_RS04030;Name=LPH58_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04030;old_locus_tag=LPH58_04030 NZ_CP087690.1 Protein Homology CDS 947807 948286 . - 0 ID=cds-WP_038271387.1;Parent=gene-LPH58_RS04030;Dbxref=Genbank:WP_038271387.1;Name=WP_038271387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024212.2;locus_tag=LPH58_RS04030;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_038271387.1;transl_table=11 NZ_CP087690.1 RefSeq gene 948523 948831 . - . ID=gene-LPH58_RS04035;Name=LPH58_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04035;old_locus_tag=LPH58_04035 NZ_CP087690.1 GeneMarkS-2+ CDS 948523 948831 . - 0 ID=cds-WP_160165184.1;Parent=gene-LPH58_RS04035;Dbxref=Genbank:WP_160165184.1;Name=WP_160165184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04035;product=hypothetical protein;protein_id=WP_160165184.1;transl_table=11 NZ_CP087690.1 RefSeq gene 949105 949293 . + . ID=gene-LPH58_RS04040;Name=LPH58_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04040;old_locus_tag=LPH58_04040 NZ_CP087690.1 Protein Homology CDS 949105 949293 . + 0 ID=cds-WP_051482330.1;Parent=gene-LPH58_RS04040;Dbxref=Genbank:WP_051482330.1;Name=WP_051482330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018180.2;locus_tag=LPH58_RS04040;product=epoxide hydrolase N-terminal domain-containing protein;protein_id=WP_051482330.1;transl_table=11 NZ_CP087690.1 RefSeq gene 949368 949892 . + . ID=gene-LPH58_RS04045;Name=LPH58_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04045;old_locus_tag=LPH58_04045 NZ_CP087690.1 GeneMarkS-2+ CDS 949368 949892 . + 0 ID=cds-WP_152536625.1;Parent=gene-LPH58_RS04045;Dbxref=Genbank:WP_152536625.1;Name=WP_152536625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04045;product=hypothetical protein;protein_id=WP_152536625.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 949912 950816 . + . ID=gene-LPH58_RS04050;Name=LPH58_RS04050;end_range=950816,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS04050;old_locus_tag=LPH58_04050;partial=true;pseudo=true;start_range=.,949912 NZ_CP087690.1 Protein Homology CDS 949912 950816 . + 0 ID=cds-LPH58_RS04050;Parent=gene-LPH58_RS04050;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=950816,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083476.1;locus_tag=LPH58_RS04050;partial=true;product=calcium-binding protein;pseudo=true;start_range=.,949912;transl_table=11 NZ_CP087690.1 RefSeq gene 950973 953663 . - . ID=gene-LPH58_RS04055;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LPH58_RS04055;old_locus_tag=LPH58_04055 NZ_CP087690.1 Protein Homology CDS 950973 953663 . - 0 ID=cds-WP_038271391.1;Parent=gene-LPH58_RS04055;Dbxref=Genbank:WP_038271391.1;Name=WP_038271391.1;Ontology_term=GO:0006086,GO:0004738,GO:0045250;gbkey=CDS;gene=aceE;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660853.1;locus_tag=LPH58_RS04055;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_038271391.1;transl_table=11 NZ_CP087690.1 RefSeq gene 957079 958023 . + . ID=gene-LPH58_RS04060;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LPH58_RS04060;old_locus_tag=LPH58_04060 NZ_CP087690.1 Protein Homology CDS 957079 958023 . + 0 ID=cds-WP_038271441.1;Parent=gene-LPH58_RS04060;Dbxref=Genbank:WP_038271441.1;Name=WP_038271441.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607396.1;locus_tag=LPH58_RS04060;product=ACP S-malonyltransferase;protein_id=WP_038271441.1;transl_table=11 NZ_CP087690.1 RefSeq gene 958120 958863 . + . ID=gene-LPH58_RS04065;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LPH58_RS04065;old_locus_tag=LPH58_04065 NZ_CP087690.1 Protein Homology CDS 958120 958863 . + 0 ID=cds-WP_038271392.1;Parent=gene-LPH58_RS04065;Dbxref=Genbank:WP_038271392.1;Name=WP_038271392.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814323.1;locus_tag=LPH58_RS04065;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_038271392.1;transl_table=11 NZ_CP087690.1 RefSeq gene 959030 959269 . + . ID=gene-LPH58_RS04070;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LPH58_RS04070;old_locus_tag=LPH58_04070 NZ_CP087690.1 Protein Homology CDS 959030 959269 . + 0 ID=cds-WP_004083472.1;Parent=gene-LPH58_RS04070;Dbxref=Genbank:WP_004083472.1;Name=WP_004083472.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083472.1;locus_tag=LPH58_RS04070;product=acyl carrier protein;protein_id=WP_004083472.1;transl_table=11 NZ_CP087690.1 RefSeq gene 959429 960664 . + . ID=gene-LPH58_RS04075;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LPH58_RS04075;old_locus_tag=LPH58_04075 NZ_CP087690.1 Protein Homology CDS 959429 960664 . + 0 ID=cds-WP_038271393.1;Parent=gene-LPH58_RS04075;Dbxref=Genbank:WP_038271393.1;Name=WP_038271393.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302031.1;locus_tag=LPH58_RS04075;product=beta-ketoacyl-ACP synthase II;protein_id=WP_038271393.1;transl_table=11 NZ_CP087690.1 RefSeq gene 960880 962238 . + . ID=gene-LPH58_RS04080;Name=LPH58_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04080;old_locus_tag=LPH58_04080 NZ_CP087690.1 Protein Homology CDS 960880 962238 . + 0 ID=cds-WP_038271394.1;Parent=gene-LPH58_RS04080;Dbxref=Genbank:WP_038271394.1;Name=WP_038271394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083470.1;locus_tag=LPH58_RS04080;product=aminodeoxychorismate synthase component I;protein_id=WP_038271394.1;transl_table=11 NZ_CP087690.1 RefSeq gene 962352 963398 . + . ID=gene-LPH58_RS04085;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LPH58_RS04085;old_locus_tag=LPH58_04085 NZ_CP087690.1 Protein Homology CDS 962352 963398 . + 0 ID=cds-WP_038271442.1;Parent=gene-LPH58_RS04085;Dbxref=Genbank:WP_038271442.1;Name=WP_038271442.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338004.1;locus_tag=LPH58_RS04085;product=endolytic transglycosylase MltG;protein_id=WP_038271442.1;transl_table=11 NZ_CP087690.1 RefSeq gene 963427 964389 . + . ID=gene-LPH58_RS04090;Name=LPH58_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04090;old_locus_tag=LPH58_04090 NZ_CP087690.1 Protein Homology CDS 963427 964389 . + 0 ID=cds-WP_038271395.1;Parent=gene-LPH58_RS04090;Dbxref=Genbank:WP_038271395.1;Name=WP_038271395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893200.1;locus_tag=LPH58_RS04090;product=DNA polymerase III subunit delta';protein_id=WP_038271395.1;transl_table=11 NZ_CP087690.1 RefSeq gene 964386 964739 . + . ID=gene-LPH58_RS04095;Name=LPH58_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04095;old_locus_tag=LPH58_04095 NZ_CP087690.1 Protein Homology CDS 964386 964739 . + 0 ID=cds-WP_038271396.1;Parent=gene-LPH58_RS04095;Dbxref=Genbank:WP_038271396.1;Name=WP_038271396.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155784.1;locus_tag=LPH58_RS04095;product=PilZ domain-containing protein;protein_id=WP_038271396.1;transl_table=11 NZ_CP087690.1 RefSeq gene 964801 964875 . + . ID=gene-LPH58_RS04100;Name=LPH58_RS04100;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS04100;old_locus_tag=LPH58_04100 NZ_CP087690.1 tRNAscan-SE tRNA 964801 964875 . + . ID=rna-LPH58_RS04100;Parent=gene-LPH58_RS04100;anticodon=(pos:964833..964835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04100;product=tRNA-Val NZ_CP087690.1 tRNAscan-SE exon 964801 964875 . + . ID=exon-LPH58_RS04100-1;Parent=rna-LPH58_RS04100;anticodon=(pos:964833..964835);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04100;product=tRNA-Val NZ_CP087690.1 RefSeq gene 966155 966832 . - . ID=gene-LPH58_RS04105;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LPH58_RS04105;old_locus_tag=LPH58_04105 NZ_CP087690.1 Protein Homology CDS 966155 966832 . - 0 ID=cds-WP_038271397.1;Parent=gene-LPH58_RS04105;Dbxref=Genbank:WP_038271397.1;Name=WP_038271397.1;Ontology_term=GO:0009102,GO:0004141;gbkey=CDS;gene=bioD;go_function=dethiobiotin synthase activity|0004141||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851492.1;locus_tag=LPH58_RS04105;product=dethiobiotin synthase;protein_id=WP_038271397.1;transl_table=11 NZ_CP087690.1 RefSeq gene 968541 969368 . - . ID=gene-LPH58_RS04110;Name=LPH58_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04110;old_locus_tag=LPH58_04110 NZ_CP087690.1 Protein Homology CDS 968541 969368 . - 0 ID=cds-WP_038271399.1;Parent=gene-LPH58_RS04110;Dbxref=Genbank:WP_038271399.1;Name=WP_038271399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088505.1;locus_tag=LPH58_RS04110;product=inositol monophosphatase family protein;protein_id=WP_038271399.1;transl_table=11 NZ_CP087690.1 RefSeq gene 969488 970246 . + . ID=gene-LPH58_RS04115;Name=LPH58_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04115;old_locus_tag=LPH58_04115 NZ_CP087690.1 Protein Homology CDS 969488 970246 . + 0 ID=cds-WP_038271443.1;Parent=gene-LPH58_RS04115;Dbxref=Genbank:WP_038271443.1;Name=WP_038271443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088504.1;locus_tag=LPH58_RS04115;product=RNA methyltransferase;protein_id=WP_038271443.1;transl_table=11 NZ_CP087690.1 RefSeq gene 970496 971524 . - . ID=gene-LPH58_RS04120;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=LPH58_RS04120;old_locus_tag=LPH58_04120 NZ_CP087690.1 Protein Homology CDS 970496 971524 . - 0 ID=cds-WP_038271400.1;Parent=gene-LPH58_RS04120;Dbxref=Genbank:WP_038271400.1;Name=WP_038271400.1;Ontology_term=GO:0072581;gbkey=CDS;gene=epmB;go_process=protein-N6-(L-lysyl)-L-lysine modification to protein-N6-(beta-lysyl)-L-lysine|0072581||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408738.1;locus_tag=LPH58_RS04120;product=EF-P beta-lysylation protein EpmB;protein_id=WP_038271400.1;transl_table=11 NZ_CP087690.1 RefSeq gene 971627 972193 . + . ID=gene-LPH58_RS04125;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LPH58_RS04125;old_locus_tag=LPH58_04125 NZ_CP087690.1 Protein Homology CDS 971627 972193 . + 0 ID=cds-WP_038271401.1;Parent=gene-LPH58_RS04125;Dbxref=Genbank:WP_038271401.1;Name=WP_038271401.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301003.1;locus_tag=LPH58_RS04125;product=elongation factor P;protein_id=WP_038271401.1;transl_table=11 NZ_CP087690.1 RefSeq gene 972331 973674 . + . ID=gene-LPH58_RS04130;Name=LPH58_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04130;old_locus_tag=LPH58_04130 NZ_CP087690.1 Protein Homology CDS 972331 973674 . + 0 ID=cds-WP_038271402.1;Parent=gene-LPH58_RS04130;Dbxref=Genbank:WP_038271402.1;Name=WP_038271402.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159956.1;locus_tag=LPH58_RS04130;product=TRZ/ATZ family hydrolase;protein_id=WP_038271402.1;transl_table=11 NZ_CP087690.1 RefSeq gene 973705 974442 . + . ID=gene-LPH58_RS04135;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LPH58_RS04135;old_locus_tag=LPH58_04135 NZ_CP087690.1 Protein Homology CDS 973705 974442 . + 0 ID=cds-WP_038271403.1;Parent=gene-LPH58_RS04135;Dbxref=Genbank:WP_038271403.1;Name=WP_038271403.1;Ontology_term=GO:0006744,GO:0008689;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinone-9 3-O-methyltransferase activity|0008689||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851498.1;locus_tag=LPH58_RS04135;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_038271403.1;transl_table=11 NZ_CP087690.1 RefSeq gene 974432 975121 . + . ID=gene-LPH58_RS04140;Name=LPH58_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04140;old_locus_tag=LPH58_04140 NZ_CP087690.1 Protein Homology CDS 974432 975121 . + 0 ID=cds-WP_038271404.1;Parent=gene-LPH58_RS04140;Dbxref=Genbank:WP_038271404.1;Name=WP_038271404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894913.1;locus_tag=LPH58_RS04140;product=phosphoglycolate phosphatase;protein_id=WP_038271404.1;transl_table=11 NZ_CP087690.1 RefSeq gene 975146 975835 . + . ID=gene-LPH58_RS04145;Name=LPH58_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04145;old_locus_tag=LPH58_04145 NZ_CP087690.1 Protein Homology CDS 975146 975835 . + 0 ID=cds-WP_038271405.1;Parent=gene-LPH58_RS04145;Dbxref=Genbank:WP_038271405.1;Name=WP_038271405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156122.1;locus_tag=LPH58_RS04145;product=phytoene synthase;protein_id=WP_038271405.1;transl_table=11 NZ_CP087690.1 RefSeq gene 976328 977440 . - . ID=gene-LPH58_RS04150;Name=LPH58_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04150;old_locus_tag=LPH58_04150 NZ_CP087690.1 Protein Homology CDS 976328 977440 . - 0 ID=cds-WP_038271406.1;Parent=gene-LPH58_RS04150;Dbxref=Genbank:WP_038271406.1;Name=WP_038271406.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088494.1;locus_tag=LPH58_RS04150;product=homoserine O-acetyltransferase;protein_id=WP_038271406.1;transl_table=11 NZ_CP087690.1 RefSeq gene 978080 978679 . - . ID=gene-LPH58_RS04155;Name=LPH58_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04155;old_locus_tag=LPH58_04155 NZ_CP087690.1 Protein Homology CDS 978080 978679 . - 0 ID=cds-WP_038271407.1;Parent=gene-LPH58_RS04155;Dbxref=Genbank:WP_038271407.1;Name=WP_038271407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086014.1;locus_tag=LPH58_RS04155;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_038271407.1;transl_table=11 NZ_CP087690.1 RefSeq gene 978672 979637 . - . ID=gene-LPH58_RS04160;Name=LPH58_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04160;old_locus_tag=LPH58_04160 NZ_CP087690.1 Protein Homology CDS 978672 979637 . - 0 ID=cds-WP_230428501.1;Parent=gene-LPH58_RS04160;Dbxref=Genbank:WP_230428501.1;Name=WP_230428501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027651.2;locus_tag=LPH58_RS04160;product=hypothetical protein;protein_id=WP_230428501.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 980514 980899 . - . ID=gene-LPH58_RS04165;Name=LPH58_RS04165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS04165;old_locus_tag=LPH58_04165;pseudo=true NZ_CP087690.1 Protein Homology CDS 980514 980899 . - 0 ID=cds-LPH58_RS04165;Parent=gene-LPH58_RS04165;Note=frameshifted%3B internal stop;Ontology_term=GO:0017003,GO:0017004,GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;go_process=protein-heme linkage|0017003||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851508.1;locus_tag=LPH58_RS04165;product=cytochrome c maturation protein CcmE;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 980952 981128 . - . ID=gene-LPH58_RS04170;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=LPH58_RS04170;old_locus_tag=LPH58_04170 NZ_CP087690.1 Protein Homology CDS 980952 981128 . - 0 ID=cds-WP_069636214.1;Parent=gene-LPH58_RS04170;Dbxref=Genbank:WP_069636214.1;Name=WP_069636214.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382686.1;locus_tag=LPH58_RS04170;product=heme exporter protein CcmD;protein_id=WP_069636214.1;transl_table=11 NZ_CP087690.1 RefSeq gene 981128 981262 . - . ID=gene-LPH58_RS11945;Name=LPH58_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11945 NZ_CP087690.1 GeneMarkS-2+ CDS 981128 981262 . - 0 ID=cds-WP_267903175.1;Parent=gene-LPH58_RS11945;Dbxref=Genbank:WP_267903175.1;Name=WP_267903175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11945;product=hypothetical protein;protein_id=WP_267903175.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 981504 982102 . - . ID=gene-LPH58_RS04175;Name=LPH58_RS04175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS04175;old_locus_tag=LPH58_04175;pseudo=true NZ_CP087690.1 Protein Homology CDS 981504 982102 . - 0 ID=cds-LPH58_RS04175;Parent=gene-LPH58_RS04175;Note=frameshifted%3B internal stop;Ontology_term=GO:0015886,GO:0017004,GO:0015232,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003473242.1;locus_tag=LPH58_RS04175;product=heme exporter protein CcmB;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 982219 982838 . - . ID=gene-LPH58_RS04180;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=pseudogene;locus_tag=LPH58_RS04180;old_locus_tag=LPH58_04180;pseudo=true NZ_CP087690.1 Protein Homology CDS 982219 982838 . - 0 ID=cds-LPH58_RS04180;Parent=gene-LPH58_RS04180;Note=frameshifted;Ontology_term=GO:0015886,GO:0015439,GO:0043190;gbkey=CDS;gene=ccmA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type heme transporter activity|0015439||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088477.1;locus_tag=LPH58_RS04180;product=heme ABC exporter ATP-binding protein CcmA;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 983007 984155 . + . ID=gene-LPH58_RS04185;Name=LPH58_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04185;old_locus_tag=LPH58_04185 NZ_CP087690.1 Protein Homology CDS 983007 984155 . + 0 ID=cds-WP_038271408.1;Parent=gene-LPH58_RS04185;Dbxref=Genbank:WP_038271408.1;Name=WP_038271408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007964632.1;locus_tag=LPH58_RS04185;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_038271408.1;transl_table=11 NZ_CP087690.1 RefSeq gene 984169 984984 . + . ID=gene-LPH58_RS04190;Name=LPH58_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04190;old_locus_tag=LPH58_04190 NZ_CP087690.1 Protein Homology CDS 984169 984984 . + 0 ID=cds-WP_038271409.1;Parent=gene-LPH58_RS04190;Dbxref=Genbank:WP_038271409.1;Name=WP_038271409.1;Ontology_term=GO:0006807;gbkey=CDS;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088475.1;locus_tag=LPH58_RS04190;product=amidohydrolase;protein_id=WP_038271409.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 985074 985511 . + . ID=gene-LPH58_RS04195;Name=LPH58_RS04195;end_range=985511,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS04195;old_locus_tag=LPH58_04195;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 985074 985511 . + 0 ID=cds-LPH58_RS04195;Parent=gene-LPH58_RS04195;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=985511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474141.1;locus_tag=LPH58_RS04195;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 985959 987377 . - . ID=gene-LPH58_RS04200;Name=LPH58_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04200;old_locus_tag=LPH58_04200 NZ_CP087690.1 Protein Homology CDS 985959 987377 . - 0 ID=cds-WP_038271410.1;Parent=gene-LPH58_RS04200;Dbxref=Genbank:WP_038271410.1;Name=WP_038271410.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088470.1;locus_tag=LPH58_RS04200;product=pseudouridine synthase;protein_id=WP_038271410.1;transl_table=11 NZ_CP087690.1 RefSeq gene 987374 988351 . - . ID=gene-LPH58_RS04205;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LPH58_RS04205;old_locus_tag=LPH58_04205 NZ_CP087690.1 Protein Homology CDS 987374 988351 . - 0 ID=cds-WP_038271447.1;Parent=gene-LPH58_RS04205;Dbxref=Genbank:WP_038271447.1;Name=WP_038271447.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037358.1;locus_tag=LPH58_RS04205;product=SMC-Scp complex subunit ScpB;protein_id=WP_038271447.1;transl_table=11 NZ_CP087690.1 RefSeq gene 988365 989276 . - . ID=gene-LPH58_RS04210;Name=LPH58_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04210;old_locus_tag=LPH58_04210 NZ_CP087690.1 Protein Homology CDS 988365 989276 . - 0 ID=cds-WP_038271411.1;Parent=gene-LPH58_RS04210;Dbxref=Genbank:WP_038271411.1;Name=WP_038271411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086003.1;locus_tag=LPH58_RS04210;product=ScpA family protein;protein_id=WP_038271411.1;transl_table=11 NZ_CP087690.1 RefSeq gene 989636 989923 . + . ID=gene-LPH58_RS04215;Name=LPH58_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04215;old_locus_tag=LPH58_04215 NZ_CP087690.1 GeneMarkS-2+ CDS 989636 989923 . + 0 ID=cds-WP_051482334.1;Parent=gene-LPH58_RS04215;Dbxref=Genbank:WP_051482334.1;Name=WP_051482334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04215;product=hypothetical protein;protein_id=WP_051482334.1;transl_table=11 NZ_CP087690.1 RefSeq gene 989920 990192 . + . ID=gene-LPH58_RS04220;Name=LPH58_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04220;old_locus_tag=LPH58_04220 NZ_CP087690.1 Protein Homology CDS 989920 990192 . + 0 ID=cds-WP_038271449.1;Parent=gene-LPH58_RS04220;Dbxref=Genbank:WP_038271449.1;Name=WP_038271449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016904540.1;locus_tag=LPH58_RS04220;product=BolA family transcriptional regulator;protein_id=WP_038271449.1;transl_table=11 NZ_CP087690.1 RefSeq gene 990173 990364 . + . ID=gene-LPH58_RS04225;Name=LPH58_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04225;old_locus_tag=LPH58_04225 NZ_CP087690.1 GeneMarkS-2+ CDS 990173 990364 . + 0 ID=cds-WP_152536626.1;Parent=gene-LPH58_RS04225;Dbxref=Genbank:WP_152536626.1;Name=WP_152536626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04225;product=hypothetical protein;protein_id=WP_152536626.1;transl_table=11 NZ_CP087690.1 RefSeq gene 990790 992391 . + . ID=gene-LPH58_RS04230;Name=LPH58_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04230;old_locus_tag=LPH58_04230 NZ_CP087690.1 Protein Homology CDS 990790 992391 . + 0 ID=cds-WP_038271453.1;Parent=gene-LPH58_RS04230;Dbxref=Genbank:WP_038271453.1;Name=WP_038271453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894893.1;locus_tag=LPH58_RS04230;product=hypothetical protein;protein_id=WP_038271453.1;transl_table=11 NZ_CP087690.1 RefSeq gene 992440 993687 . + . ID=gene-LPH58_RS04235;Name=LPH58_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04235;old_locus_tag=LPH58_04235 NZ_CP087690.1 Protein Homology CDS 992440 993687 . + 0 ID=cds-WP_051482335.1;Parent=gene-LPH58_RS04235;Dbxref=Genbank:WP_051482335.1;Name=WP_051482335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852884.1;locus_tag=LPH58_RS04235;product=sugar ABC transporter substrate-binding protein;protein_id=WP_051482335.1;transl_table=11 NZ_CP087690.1 RefSeq gene 993684 994565 . + . ID=gene-LPH58_RS04240;Name=LPH58_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04240;old_locus_tag=LPH58_04240 NZ_CP087690.1 Protein Homology CDS 993684 994565 . + 0 ID=cds-WP_038271413.1;Parent=gene-LPH58_RS04240;Dbxref=Genbank:WP_038271413.1;Name=WP_038271413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003489669.1;locus_tag=LPH58_RS04240;product=sugar ABC transporter permease;protein_id=WP_038271413.1;transl_table=11 NZ_CP087690.1 RefSeq gene 994562 995398 . + . ID=gene-LPH58_RS04245;Name=LPH58_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04245;old_locus_tag=LPH58_04245 NZ_CP087690.1 Protein Homology CDS 994562 995398 . + 0 ID=cds-WP_038271414.1;Parent=gene-LPH58_RS04245;Dbxref=Genbank:WP_038271414.1;Name=WP_038271414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357393.1;locus_tag=LPH58_RS04245;product=carbohydrate ABC transporter permease;protein_id=WP_038271414.1;transl_table=11 NZ_CP087690.1 RefSeq gene 995404 998568 . + . ID=gene-LPH58_RS04250;Name=LPH58_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04250;old_locus_tag=LPH58_04250 NZ_CP087690.1 Protein Homology CDS 995404 998568 . + 0 ID=cds-WP_038271415.1;Parent=gene-LPH58_RS04250;Dbxref=Genbank:WP_038271415.1;Name=WP_038271415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852202.1;locus_tag=LPH58_RS04250;product=discoidin domain-containing protein;protein_id=WP_038271415.1;transl_table=11 NZ_CP087690.1 RefSeq gene 998893 1000107 . - . ID=gene-LPH58_RS04255;Name=LPH58_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04255;old_locus_tag=LPH58_04255 NZ_CP087690.1 Protein Homology CDS 998893 1000107 . - 0 ID=cds-WP_171898074.1;Parent=gene-LPH58_RS04255;Dbxref=Genbank:WP_171898074.1;Name=WP_171898074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894888.1;locus_tag=LPH58_RS04255;product=TraB/GumN family protein;protein_id=WP_171898074.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1000235 1001122 . - . ID=gene-LPH58_RS04260;Name=LPH58_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04260;old_locus_tag=LPH58_04260 NZ_CP087690.1 Protein Homology CDS 1000235 1001122 . - 0 ID=cds-WP_038271417.1;Parent=gene-LPH58_RS04260;Dbxref=Genbank:WP_038271417.1;Name=WP_038271417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451810.1;locus_tag=LPH58_RS04260;product=carbon-nitrogen hydrolase;protein_id=WP_038271417.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1001204 1002259 . - . ID=gene-LPH58_RS04265;Name=LPH58_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04265;old_locus_tag=LPH58_04265 NZ_CP087690.1 Protein Homology CDS 1001204 1002259 . - 0 ID=cds-WP_038271418.1;Parent=gene-LPH58_RS04265;Dbxref=Genbank:WP_038271418.1;Name=WP_038271418.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085983.1;locus_tag=LPH58_RS04265;product=agmatine deiminase family protein;protein_id=WP_038271418.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1002307 1002639 . - . ID=gene-LPH58_RS04270;Name=LPH58_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04270;old_locus_tag=LPH58_04270 NZ_CP087690.1 Protein Homology CDS 1002307 1002639 . - 0 ID=cds-WP_038271419.1;Parent=gene-LPH58_RS04270;Dbxref=Genbank:WP_038271419.1;Name=WP_038271419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894885.1;locus_tag=LPH58_RS04270;product=hypothetical protein;protein_id=WP_038271419.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1002812 1002937 . - . ID=gene-LPH58_RS04275;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=LPH58_RS04275;old_locus_tag=LPH58_04275 NZ_CP087690.1 Protein Homology CDS 1002812 1002937 . - 0 ID=cds-WP_004085979.1;Parent=gene-LPH58_RS04275;Dbxref=Genbank:WP_004085979.1;Name=WP_004085979.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098120.1;locus_tag=LPH58_RS04275;product=type B 50S ribosomal protein L36;protein_id=WP_004085979.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1003165 1003836 . + . ID=gene-LPH58_RS04280;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LPH58_RS04280;old_locus_tag=LPH58_04280 NZ_CP087690.1 Protein Homology CDS 1003165 1003836 . + 0 ID=cds-WP_038271420.1;Parent=gene-LPH58_RS04280;Dbxref=Genbank:WP_038271420.1;Name=WP_038271420.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852197.1;locus_tag=LPH58_RS04280;product=(d)CMP kinase;protein_id=WP_038271420.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1004038 1005714 . + . ID=gene-LPH58_RS04285;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LPH58_RS04285;old_locus_tag=LPH58_04285 NZ_CP087690.1 Protein Homology CDS 1004038 1005714 . + 0 ID=cds-WP_038271421.1;Parent=gene-LPH58_RS04285;Dbxref=Genbank:WP_038271421.1;Name=WP_038271421.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183099.1;locus_tag=LPH58_RS04285;product=30S ribosomal protein S1;protein_id=WP_038271421.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1005816 1006130 . + . ID=gene-LPH58_RS04290;Name=LPH58_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04290;old_locus_tag=LPH58_04290 NZ_CP087690.1 Protein Homology CDS 1005816 1006130 . + 0 ID=cds-WP_038271422.1;Parent=gene-LPH58_RS04290;Dbxref=Genbank:WP_038271422.1;Name=WP_038271422.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088432.1;locus_tag=LPH58_RS04290;product=integration host factor subunit beta;protein_id=WP_038271422.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1006180 1006476 . + . ID=gene-LPH58_RS04295;Name=LPH58_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04295;old_locus_tag=LPH58_04295 NZ_CP087690.1 Protein Homology CDS 1006180 1006476 . + 0 ID=cds-WP_038271423.1;Parent=gene-LPH58_RS04295;Dbxref=Genbank:WP_038271423.1;Name=WP_038271423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088430.1;locus_tag=LPH58_RS04295;product=LapA family protein;protein_id=WP_038271423.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1006481 1007659 . + . ID=gene-LPH58_RS04300;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LPH58_RS04300;old_locus_tag=LPH58_04300 NZ_CP087690.1 Protein Homology CDS 1006481 1007659 . + 0 ID=cds-WP_038271424.1;Parent=gene-LPH58_RS04300;Dbxref=Genbank:WP_038271424.1;Name=WP_038271424.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468665.1;locus_tag=LPH58_RS04300;product=lipopolysaccharide assembly protein LapB;protein_id=WP_038271424.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1007659 1008636 . + . ID=gene-LPH58_RS04305;Name=LPH58_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04305;old_locus_tag=LPH58_04305 NZ_CP087690.1 Protein Homology CDS 1007659 1008636 . + 0 ID=cds-WP_081755449.1;Parent=gene-LPH58_RS04305;Dbxref=Genbank:WP_081755449.1;Name=WP_081755449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851517.1;locus_tag=LPH58_RS04305;product=lipopolysaccharide biosynthesis protein;protein_id=WP_081755449.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1008649 1010556 . + . ID=gene-LPH58_RS04310;Name=LPH58_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04310;old_locus_tag=LPH58_04310 NZ_CP087690.1 Protein Homology CDS 1008649 1010556 . + 0 ID=cds-WP_038271425.1;Parent=gene-LPH58_RS04310;Dbxref=Genbank:WP_038271425.1;Name=WP_038271425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300130.1;locus_tag=LPH58_RS04310;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_038271425.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1010556 1011446 . + . ID=gene-LPH58_RS04315;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LPH58_RS04315;old_locus_tag=LPH58_04315 NZ_CP087690.1 Protein Homology CDS 1010556 1011446 . + 0 ID=cds-WP_038271426.1;Parent=gene-LPH58_RS04315;Dbxref=Genbank:WP_038271426.1;Name=WP_038271426.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894877.1;locus_tag=LPH58_RS04315;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_038271426.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1011660 1012544 . + . ID=gene-LPH58_RS04320;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LPH58_RS04320;old_locus_tag=LPH58_04320 NZ_CP087690.1 Protein Homology CDS 1011660 1012544 . + 0 ID=cds-WP_114867092.1;Parent=gene-LPH58_RS04320;Dbxref=Genbank:WP_114867092.1;Name=WP_114867092.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451188.1;locus_tag=LPH58_RS04320;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_114867092.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1012661 1014118 . + . ID=gene-LPH58_RS04325;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LPH58_RS04325;old_locus_tag=LPH58_04325 NZ_CP087690.1 Protein Homology CDS 1012661 1014118 . + 0 ID=cds-WP_038271428.1;Parent=gene-LPH58_RS04325;Dbxref=Genbank:WP_038271428.1;Name=WP_038271428.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851520.1;locus_tag=LPH58_RS04325;product=IMP dehydrogenase;protein_id=WP_038271428.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1014317 1015885 . + . ID=gene-LPH58_RS04330;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LPH58_RS04330;old_locus_tag=LPH58_04330 NZ_CP087690.1 Protein Homology CDS 1014317 1015885 . + 0 ID=cds-WP_038271429.1;Parent=gene-LPH58_RS04330;Dbxref=Genbank:WP_038271429.1;Name=WP_038271429.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012510808.1;locus_tag=LPH58_RS04330;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_038271429.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1016230 1016505 . + . ID=gene-LPH58_RS04335;Name=LPH58_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04335;old_locus_tag=LPH58_04335 NZ_CP087690.1 GeneMarkS-2+ CDS 1016230 1016505 . + 0 ID=cds-WP_230428184.1;Parent=gene-LPH58_RS04335;Dbxref=Genbank:WP_230428184.1;Name=WP_230428184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04335;product=hypothetical protein;protein_id=WP_230428184.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1016645 1016890 . + . ID=gene-LPH58_RS04340;Name=LPH58_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04340;old_locus_tag=LPH58_04340 NZ_CP087690.1 GeneMarkS-2+ CDS 1016645 1016890 . + 0 ID=cds-WP_171898047.1;Parent=gene-LPH58_RS04340;Dbxref=Genbank:WP_171898047.1;Name=WP_171898047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04340;product=hypothetical protein;protein_id=WP_171898047.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1017227 1017475 . + . ID=gene-LPH58_RS04345;Name=LPH58_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04345;old_locus_tag=LPH58_04345 NZ_CP087690.1 GeneMarkS-2+ CDS 1017227 1017475 . + 0 ID=cds-WP_171898048.1;Parent=gene-LPH58_RS04345;Dbxref=Genbank:WP_171898048.1;Name=WP_171898048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04345;product=hypothetical protein;protein_id=WP_171898048.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1017759 1018751 . - . ID=gene-LPH58_RS04350;Name=LPH58_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04350;old_locus_tag=LPH58_04350 NZ_CP087690.1 GeneMarkS-2+ CDS 1017759 1018751 . - 0 ID=cds-WP_230428185.1;Parent=gene-LPH58_RS04350;Dbxref=Genbank:WP_230428185.1;Name=WP_230428185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04350;product=hypothetical protein;protein_id=WP_230428185.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1018821 1019021 . - . ID=gene-LPH58_RS04355;Name=LPH58_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04355;old_locus_tag=LPH58_04355 NZ_CP087690.1 GeneMarkS-2+ CDS 1018821 1019021 . - 0 ID=cds-WP_230428186.1;Parent=gene-LPH58_RS04355;Dbxref=Genbank:WP_230428186.1;Name=WP_230428186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04355;product=hypothetical protein;protein_id=WP_230428186.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1019093 1019842 . - . ID=gene-LPH58_RS04360;Name=LPH58_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04360;old_locus_tag=LPH58_04360 NZ_CP087690.1 Protein Homology CDS 1019093 1019842 . - 0 ID=cds-WP_038271430.1;Parent=gene-LPH58_RS04360;Dbxref=Genbank:WP_038271430.1;Name=WP_038271430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016448858.1;locus_tag=LPH58_RS04360;product=TatD family hydrolase;protein_id=WP_038271430.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1019856 1021220 . - . ID=gene-LPH58_RS04365;Name=LPH58_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04365;old_locus_tag=LPH58_04365 NZ_CP087690.1 Protein Homology CDS 1019856 1021220 . - 0 ID=cds-WP_038271431.1;Parent=gene-LPH58_RS04365;Dbxref=Genbank:WP_038271431.1;Name=WP_038271431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413106.1;locus_tag=LPH58_RS04365;product=hypothetical protein;protein_id=WP_038271431.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1021217 1021924 . - . ID=gene-LPH58_RS04370;Name=LPH58_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04370;old_locus_tag=LPH58_04370 NZ_CP087690.1 Protein Homology CDS 1021217 1021924 . - 0 ID=cds-WP_230428187.1;Parent=gene-LPH58_RS04370;Dbxref=Genbank:WP_230428187.1;Name=WP_230428187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413105.1;locus_tag=LPH58_RS04370;product=hypothetical protein;protein_id=WP_230428187.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1022074 1024005 . - . ID=gene-LPH58_RS04375;Name=LPH58_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04375;old_locus_tag=LPH58_04375 NZ_CP087690.1 Protein Homology CDS 1022074 1024005 . - 0 ID=cds-WP_038271433.1;Parent=gene-LPH58_RS04375;Dbxref=Genbank:WP_038271433.1;Name=WP_038271433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005413104.1;locus_tag=LPH58_RS04375;product=P-loop NTPase fold protein;protein_id=WP_038271433.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1024294 1024443 . + . ID=gene-LPH58_RS04380;Name=LPH58_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04380;old_locus_tag=LPH58_04380 NZ_CP087690.1 Protein Homology CDS 1024294 1024443 . + 0 ID=cds-WP_230428188.1;Parent=gene-LPH58_RS04380;Dbxref=Genbank:WP_230428188.1;Name=WP_230428188.1;Ontology_term=GO:0009307,GO:0000287,GO:0003677,GO:0009036;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,DNA binding|0003677||IEA,type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF021112.2;locus_tag=LPH58_RS04380;product=XcyI family restriction endonuclease;protein_id=WP_230428188.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1024440 1024790 . + . ID=gene-LPH58_RS04385;Name=LPH58_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04385;old_locus_tag=LPH58_04385 NZ_CP087690.1 GeneMarkS-2+ CDS 1024440 1024790 . + 0 ID=cds-WP_038271434.1;Parent=gene-LPH58_RS04385;Dbxref=Genbank:WP_038271434.1;Name=WP_038271434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04385;product=hypothetical protein;protein_id=WP_038271434.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1024790 1025734 . + . ID=gene-LPH58_RS04390;Name=LPH58_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04390;old_locus_tag=LPH58_04390 NZ_CP087690.1 Protein Homology CDS 1024790 1025734 . + 0 ID=cds-WP_230428502.1;Parent=gene-LPH58_RS04390;Dbxref=Genbank:WP_230428502.1;Name=WP_230428502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085954.1;locus_tag=LPH58_RS04390;product=hypothetical protein;protein_id=WP_230428502.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1026058 1028967 . - . ID=gene-LPH58_RS04395;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LPH58_RS04395;old_locus_tag=LPH58_04395 NZ_CP087690.1 Protein Homology CDS 1026058 1028967 . - 0 ID=cds-WP_230428279.1;Parent=gene-LPH58_RS04395;Dbxref=Genbank:WP_230428279.1;Name=WP_230428279.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851525.1;locus_tag=LPH58_RS04395;product=excinuclease ABC subunit UvrA;protein_id=WP_230428279.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1029301 1029621 . + . ID=gene-LPH58_RS04400;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LPH58_RS04400;old_locus_tag=LPH58_04400 NZ_CP087690.1 Protein Homology CDS 1029301 1029621 . + 0 ID=cds-WP_038271436.1;Parent=gene-LPH58_RS04400;Dbxref=Genbank:WP_038271436.1;Name=WP_038271436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484328.1;locus_tag=LPH58_RS04400;product=50S ribosomal protein L21;protein_id=WP_038271436.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1029646 1029903 . + . ID=gene-LPH58_RS04405;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LPH58_RS04405;old_locus_tag=LPH58_04405 NZ_CP087690.1 Protein Homology CDS 1029646 1029903 . + 0 ID=cds-WP_038271437.1;Parent=gene-LPH58_RS04405;Dbxref=Genbank:WP_038271437.1;Name=WP_038271437.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085949.1;locus_tag=LPH58_RS04405;product=50S ribosomal protein L27;protein_id=WP_038271437.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1030072 1031145 . + . ID=gene-LPH58_RS04410;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LPH58_RS04410;old_locus_tag=LPH58_04410 NZ_CP087690.1 Protein Homology CDS 1030072 1031145 . + 0 ID=cds-WP_038271438.1;Parent=gene-LPH58_RS04410;Dbxref=Genbank:WP_038271438.1;Name=WP_038271438.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017916359.1;locus_tag=LPH58_RS04410;product=GTPase ObgE;protein_id=WP_038271438.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1031259 1031528 . - . ID=gene-LPH58_RS04415;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LPH58_RS04415;old_locus_tag=LPH58_04415 NZ_CP087690.1 Protein Homology CDS 1031259 1031528 . - 0 ID=cds-WP_038271456.1;Parent=gene-LPH58_RS04415;Dbxref=Genbank:WP_038271456.1;Name=WP_038271456.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019184515.1;locus_tag=LPH58_RS04415;product=30S ribosomal protein S20;protein_id=WP_038271456.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1031642 1033234 . + . ID=gene-LPH58_RS04420;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LPH58_RS04420;old_locus_tag=LPH58_04420 NZ_CP087690.1 Protein Homology CDS 1031642 1033234 . + 0 ID=cds-WP_114867213.1;Parent=gene-LPH58_RS04420;Dbxref=Genbank:WP_114867213.1;Name=WP_114867213.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158642.1;locus_tag=LPH58_RS04420;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_114867213.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1033390 1034337 . + . ID=gene-LPH58_RS04425;Name=LPH58_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04425;old_locus_tag=LPH58_04425 NZ_CP087690.1 Protein Homology CDS 1033390 1034337 . + 0 ID=cds-WP_114867093.1;Parent=gene-LPH58_RS04425;Dbxref=Genbank:WP_114867093.1;Name=WP_114867093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085938.1;locus_tag=LPH58_RS04425;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_114867093.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1034334 1037165 . + . ID=gene-LPH58_RS04430;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LPH58_RS04430;old_locus_tag=LPH58_04430 NZ_CP087690.1 Protein Homology CDS 1034334 1037165 . + 0 ID=cds-WP_038272864.1;Parent=gene-LPH58_RS04430;Dbxref=Genbank:WP_038272864.1;Name=WP_038272864.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005928804.1;locus_tag=LPH58_RS04430;product=isoleucine--tRNA ligase;protein_id=WP_038272864.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1037484 1037987 . + . ID=gene-LPH58_RS04435;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LPH58_RS04435;old_locus_tag=LPH58_04435 NZ_CP087690.1 Protein Homology CDS 1037484 1037987 . + 0 ID=cds-WP_038272868.1;Parent=gene-LPH58_RS04435;Dbxref=Genbank:WP_038272868.1;Name=WP_038272868.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304369.1;locus_tag=LPH58_RS04435;product=signal peptidase II;protein_id=WP_038272868.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1038046 1038996 . + . ID=gene-LPH58_RS04440;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LPH58_RS04440;old_locus_tag=LPH58_04440 NZ_CP087690.1 Protein Homology CDS 1038046 1038996 . + 0 ID=cds-WP_038272862.1;Parent=gene-LPH58_RS04440;Dbxref=Genbank:WP_038272862.1;Name=WP_038272862.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258401.1;locus_tag=LPH58_RS04440;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_038272862.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1039198 1039273 . + . ID=gene-LPH58_RS04445;Name=LPH58_RS04445;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS04445;old_locus_tag=LPH58_04445 NZ_CP087690.1 tRNAscan-SE tRNA 1039198 1039273 . + . ID=rna-LPH58_RS04445;Parent=gene-LPH58_RS04445;anticodon=(pos:1039231..1039233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04445;product=tRNA-Thr NZ_CP087690.1 tRNAscan-SE exon 1039198 1039273 . + . ID=exon-LPH58_RS04445-1;Parent=rna-LPH58_RS04445;anticodon=(pos:1039231..1039233);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04445;product=tRNA-Thr NZ_CP087690.1 RefSeq gene 1039711 1039833 . - . ID=gene-LPH58_RS11950;Name=LPH58_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11950 NZ_CP087690.1 GeneMarkS-2+ CDS 1039711 1039833 . - 0 ID=cds-WP_268980405.1;Parent=gene-LPH58_RS11950;Dbxref=Genbank:WP_268980405.1;Name=WP_268980405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11950;product=hypothetical protein;protein_id=WP_268980405.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1039859 1040815 . - . ID=gene-LPH58_RS04450;Name=LPH58_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04450;old_locus_tag=LPH58_04450 NZ_CP087690.1 Protein Homology CDS 1039859 1040815 . - 0 ID=cds-WP_038272860.1;Parent=gene-LPH58_RS04450;Dbxref=Genbank:WP_038272860.1;Name=WP_038272860.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.2;locus_tag=LPH58_RS04450;product=reverse transcriptase family protein;protein_id=WP_038272860.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1040769 1041044 . - . ID=gene-LPH58_RS04455;Name=LPH58_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04455;old_locus_tag=LPH58_04455 NZ_CP087690.1 Protein Homology CDS 1040769 1041044 . - 0 ID=cds-WP_200866217.1;Parent=gene-LPH58_RS04455;Dbxref=Genbank:WP_200866217.1;Name=WP_200866217.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024252.2;locus_tag=LPH58_RS04455;product=helix-turn-helix transcriptional regulator;protein_id=WP_200866217.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1041962 1042267 . - . ID=gene-LPH58_RS04460;Name=LPH58_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04460;old_locus_tag=LPH58_04460 NZ_CP087690.1 GeneMarkS-2+ CDS 1041962 1042267 . - 0 ID=cds-WP_038272854.1;Parent=gene-LPH58_RS04460;Dbxref=Genbank:WP_038272854.1;Name=WP_038272854.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04460;product=hypothetical protein;protein_id=WP_038272854.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1042420 1042626 . + . ID=gene-LPH58_RS04465;Name=LPH58_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04465;old_locus_tag=LPH58_04465 NZ_CP087690.1 GeneMarkS-2+ CDS 1042420 1042626 . + 0 ID=cds-WP_152536665.1;Parent=gene-LPH58_RS04465;Dbxref=Genbank:WP_152536665.1;Name=WP_152536665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04465;product=hypothetical protein;protein_id=WP_152536665.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1042856 1043074 . - . ID=gene-LPH58_RS04470;Name=LPH58_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04470;old_locus_tag=LPH58_04470 NZ_CP087690.1 GeneMarkS-2+ CDS 1042856 1043074 . - 0 ID=cds-WP_038272853.1;Parent=gene-LPH58_RS04470;Dbxref=Genbank:WP_038272853.1;Name=WP_038272853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04470;product=hypothetical protein;protein_id=WP_038272853.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1043197 1043415 . + . ID=gene-LPH58_RS04475;Name=LPH58_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04475;old_locus_tag=LPH58_04475 NZ_CP087690.1 GeneMarkS-2+ CDS 1043197 1043415 . + 0 ID=cds-WP_230428189.1;Parent=gene-LPH58_RS04475;Dbxref=Genbank:WP_230428189.1;Name=WP_230428189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04475;product=hypothetical protein;protein_id=WP_230428189.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1043820 1043978 . + . ID=gene-LPH58_RS04480;Name=LPH58_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04480;old_locus_tag=LPH58_04480 NZ_CP087690.1 GeneMarkS-2+ CDS 1043820 1043978 . + 0 ID=cds-WP_230428190.1;Parent=gene-LPH58_RS04480;Dbxref=Genbank:WP_230428190.1;Name=WP_230428190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04480;product=hypothetical protein;protein_id=WP_230428190.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1044085 1044498 . + . ID=gene-LPH58_RS04485;Name=LPH58_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04485;old_locus_tag=LPH58_04485 NZ_CP087690.1 Protein Homology CDS 1044085 1044498 . + 0 ID=cds-WP_051482383.1;Parent=gene-LPH58_RS04485;Dbxref=Genbank:WP_051482383.1;Name=WP_051482383.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016923.2;locus_tag=LPH58_RS04485;product=phage major capsid protein;protein_id=WP_051482383.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1044590 1044724 . + . ID=gene-LPH58_RS11955;Name=LPH58_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11955 NZ_CP087690.1 GeneMarkS-2+ CDS 1044590 1044724 . + 0 ID=cds-WP_267903176.1;Parent=gene-LPH58_RS11955;Dbxref=Genbank:WP_267903176.1;Name=WP_267903176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11955;product=hypothetical protein;protein_id=WP_267903176.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1044812 1044991 . + . ID=gene-LPH58_RS04490;Name=LPH58_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04490;old_locus_tag=LPH58_04490 NZ_CP087690.1 GeneMarkS-2+ CDS 1044812 1044991 . + 0 ID=cds-WP_152536664.1;Parent=gene-LPH58_RS04490;Dbxref=Genbank:WP_152536664.1;Name=WP_152536664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04490;product=hypothetical protein;protein_id=WP_152536664.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1045214 1045423 . - . ID=gene-LPH58_RS04495;Name=LPH58_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04495;old_locus_tag=LPH58_04495 NZ_CP087690.1 GeneMarkS-2+ CDS 1045214 1045423 . - 0 ID=cds-WP_230428192.1;Parent=gene-LPH58_RS04495;Dbxref=Genbank:WP_230428192.1;Name=WP_230428192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04495;product=hypothetical protein;protein_id=WP_230428192.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1045475 1045648 . + . ID=gene-LPH58_RS04500;Name=LPH58_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04500;old_locus_tag=LPH58_04500 NZ_CP087690.1 GeneMarkS-2+ CDS 1045475 1045648 . + 0 ID=cds-WP_230428193.1;Parent=gene-LPH58_RS04500;Dbxref=Genbank:WP_230428193.1;Name=WP_230428193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04500;product=hypothetical protein;protein_id=WP_230428193.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1045843 1046010 . - . ID=gene-LPH58_RS04505;Name=LPH58_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04505;old_locus_tag=LPH58_04505 NZ_CP087690.1 GeneMarkS-2+ CDS 1045843 1046010 . - 0 ID=cds-WP_171898049.1;Parent=gene-LPH58_RS04505;Dbxref=Genbank:WP_171898049.1;Name=WP_171898049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04505;product=hypothetical protein;protein_id=WP_171898049.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1046046 1049573 . - . ID=gene-LPH58_RS04510;Name=LPH58_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04510;old_locus_tag=LPH58_04510 NZ_CP087690.1 Protein Homology CDS 1046046 1049573 . - 0 ID=cds-WP_038272843.1;Parent=gene-LPH58_RS04510;Dbxref=Genbank:WP_038272843.1;Name=WP_038272843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088084.1;locus_tag=LPH58_RS04510;product=AAA domain-containing protein;protein_id=WP_038272843.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1050301 1058070 . - . ID=gene-LPH58_RS04515;Name=LPH58_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04515;old_locus_tag=LPH58_04515 NZ_CP087690.1 Protein Homology CDS 1050301 1058070 . - 0 ID=cds-WP_114867094.1;Parent=gene-LPH58_RS04515;Dbxref=Genbank:WP_114867094.1;Name=WP_114867094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382677.1;locus_tag=LPH58_RS04515;product=bacteriocin;protein_id=WP_114867094.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1058070 1058693 . - . ID=gene-LPH58_RS04520;Name=LPH58_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04520;old_locus_tag=LPH58_04520 NZ_CP087690.1 Protein Homology CDS 1058070 1058693 . - 0 ID=cds-WP_038270281.1;Parent=gene-LPH58_RS04520;Dbxref=Genbank:WP_038270281.1;Name=WP_038270281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH58_RS04520;product=hypothetical protein;protein_id=WP_038270281.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1058690 1058968 . - . ID=gene-LPH58_RS04525;Name=LPH58_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04525;old_locus_tag=LPH58_04525 NZ_CP087690.1 Protein Homology CDS 1058690 1058968 . - 0 ID=cds-WP_038270278.1;Parent=gene-LPH58_RS04525;Dbxref=Genbank:WP_038270278.1;Name=WP_038270278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894851.1;locus_tag=LPH58_RS04525;product=hypothetical protein;protein_id=WP_038270278.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1058965 1059588 . - . ID=gene-LPH58_RS04530;Name=LPH58_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04530;old_locus_tag=LPH58_04530 NZ_CP087690.1 Protein Homology CDS 1058965 1059588 . - 0 ID=cds-WP_038270275.1;Parent=gene-LPH58_RS04530;Dbxref=Genbank:WP_038270275.1;Name=WP_038270275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH58_RS04530;product=hypothetical protein;protein_id=WP_038270275.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1059585 1059863 . - . ID=gene-LPH58_RS04535;Name=LPH58_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04535;old_locus_tag=LPH58_04535 NZ_CP087690.1 Protein Homology CDS 1059585 1059863 . - 0 ID=cds-WP_038270272.1;Parent=gene-LPH58_RS04535;Dbxref=Genbank:WP_038270272.1;Name=WP_038270272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894851.1;locus_tag=LPH58_RS04535;product=hypothetical protein;protein_id=WP_038270272.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1059860 1060483 . - . ID=gene-LPH58_RS04540;Name=LPH58_RS04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04540;old_locus_tag=LPH58_04540 NZ_CP087690.1 Protein Homology CDS 1059860 1060483 . - 0 ID=cds-WP_038270268.1;Parent=gene-LPH58_RS04540;Dbxref=Genbank:WP_038270268.1;Name=WP_038270268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098099.1;locus_tag=LPH58_RS04540;product=hypothetical protein;protein_id=WP_038270268.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1060480 1060758 . - . ID=gene-LPH58_RS04545;Name=LPH58_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04545;old_locus_tag=LPH58_04545 NZ_CP087690.1 Protein Homology CDS 1060480 1060758 . - 0 ID=cds-WP_038270265.1;Parent=gene-LPH58_RS04545;Dbxref=Genbank:WP_038270265.1;Name=WP_038270265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894851.1;locus_tag=LPH58_RS04545;product=hypothetical protein;protein_id=WP_038270265.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1060755 1061378 . - . ID=gene-LPH58_RS04550;Name=LPH58_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04550;old_locus_tag=LPH58_04550 NZ_CP087690.1 Protein Homology CDS 1060755 1061378 . - 0 ID=cds-WP_038270262.1;Parent=gene-LPH58_RS04550;Dbxref=Genbank:WP_038270262.1;Name=WP_038270262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH58_RS04550;product=hypothetical protein;protein_id=WP_038270262.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1061375 1061653 . - . ID=gene-LPH58_RS04555;Name=LPH58_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04555;old_locus_tag=LPH58_04555 NZ_CP087690.1 Protein Homology CDS 1061375 1061653 . - 0 ID=cds-WP_051482245.1;Parent=gene-LPH58_RS04555;Dbxref=Genbank:WP_051482245.1;Name=WP_051482245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098106.1;locus_tag=LPH58_RS04555;product=hypothetical protein;protein_id=WP_051482245.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1061647 1062381 . - . ID=gene-LPH58_RS04560;Name=LPH58_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04560;old_locus_tag=LPH58_04560 NZ_CP087690.1 Protein Homology CDS 1061647 1062381 . - 0 ID=cds-WP_230428194.1;Parent=gene-LPH58_RS04560;Dbxref=Genbank:WP_230428194.1;Name=WP_230428194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098107.1;locus_tag=LPH58_RS04560;product=hypothetical protein;protein_id=WP_230428194.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1062528 1063037 . - . ID=gene-LPH58_RS04565;Name=LPH58_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04565;old_locus_tag=LPH58_04565 NZ_CP087690.1 Protein Homology CDS 1062528 1063037 . - 0 ID=cds-WP_038270259.1;Parent=gene-LPH58_RS04565;Dbxref=Genbank:WP_038270259.1;Name=WP_038270259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087886.1;locus_tag=LPH58_RS04565;product=hypothetical protein;protein_id=WP_038270259.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1063599 1063844 . - . ID=gene-LPH58_RS04570;Name=LPH58_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04570;old_locus_tag=LPH58_04570 NZ_CP087690.1 GeneMarkS-2+ CDS 1063599 1063844 . - 0 ID=cds-WP_152536569.1;Parent=gene-LPH58_RS04570;Dbxref=Genbank:WP_152536569.1;Name=WP_152536569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04570;product=hypothetical protein;protein_id=WP_152536569.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1063962 1065383 . - . ID=gene-LPH58_RS04575;Name=LPH58_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04575;old_locus_tag=LPH58_04575 NZ_CP087690.1 Protein Homology CDS 1063962 1065383 . - 0 ID=cds-WP_038270256.1;Parent=gene-LPH58_RS04575;Dbxref=Genbank:WP_038270256.1;Name=WP_038270256.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920693.1;locus_tag=LPH58_RS04575;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_038270256.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1065380 1067542 . - . ID=gene-LPH58_RS04580;Name=LPH58_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04580;old_locus_tag=LPH58_04580 NZ_CP087690.1 Protein Homology CDS 1065380 1067542 . - 0 ID=cds-WP_038270253.1;Parent=gene-LPH58_RS04580;Dbxref=Genbank:WP_038270253.1;Name=WP_038270253.1;Ontology_term=GO:0030253;gbkey=CDS;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607380.1;locus_tag=LPH58_RS04580;product=type I secretion system permease/ATPase;protein_id=WP_038270253.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1067931 1069205 . + . ID=gene-LPH58_RS04585;Name=LPH58_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04585;old_locus_tag=LPH58_04585 NZ_CP087690.1 Protein Homology CDS 1067931 1069205 . + 0 ID=cds-WP_038270250.1;Parent=gene-LPH58_RS04585;Dbxref=Genbank:WP_038270250.1;Name=WP_038270250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851306.1;locus_tag=LPH58_RS04585;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_038270250.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1069826 1070569 . - . ID=gene-LPH58_RS04590;Name=LPH58_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04590;old_locus_tag=LPH58_04590 NZ_CP087690.1 Protein Homology CDS 1069826 1070569 . - 0 ID=cds-WP_230428280.1;Parent=gene-LPH58_RS04590;Dbxref=Genbank:WP_230428280.1;Name=WP_230428280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993124.1;locus_tag=LPH58_RS04590;product=polysaccharide deacetylase family protein;protein_id=WP_230428280.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1070669 1071595 . + . ID=gene-LPH58_RS04595;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LPH58_RS04595;old_locus_tag=LPH58_04595 NZ_CP087690.1 Protein Homology CDS 1070669 1071595 . + 0 ID=cds-WP_038270326.1;Parent=gene-LPH58_RS04595;Dbxref=Genbank:WP_038270326.1;Name=WP_038270326.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913558.1;locus_tag=LPH58_RS04595;product=Grx4 family monothiol glutaredoxin;protein_id=WP_038270326.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1072143 1073678 . - . ID=gene-LPH58_RS04600;Name=LPH58_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04600;old_locus_tag=LPH58_04600 NZ_CP087690.1 Protein Homology CDS 1072143 1073678 . - 0 ID=cds-WP_038270246.1;Parent=gene-LPH58_RS04600;Dbxref=Genbank:WP_038270246.1;Name=WP_038270246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303782.1;locus_tag=LPH58_RS04600;product=S53 family peptidase;protein_id=WP_038270246.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1074237 1075112 . - . ID=gene-LPH58_RS04605;Name=LPH58_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04605;old_locus_tag=LPH58_04605 NZ_CP087690.1 Protein Homology CDS 1074237 1075112 . - 0 ID=cds-WP_038270243.1;Parent=gene-LPH58_RS04605;Dbxref=Genbank:WP_038270243.1;Name=WP_038270243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543218.1;locus_tag=LPH58_RS04605;product=LysR family transcriptional regulator;protein_id=WP_038270243.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1075215 1076096 . + . ID=gene-LPH58_RS04610;Name=LPH58_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04610;old_locus_tag=LPH58_04610 NZ_CP087690.1 Protein Homology CDS 1075215 1076096 . + 0 ID=cds-WP_038270240.1;Parent=gene-LPH58_RS04610;Dbxref=Genbank:WP_038270240.1;Name=WP_038270240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403947.1;locus_tag=LPH58_RS04610;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038270240.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1076159 1077232 . + . ID=gene-LPH58_RS04615;Name=LPH58_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04615;old_locus_tag=LPH58_04615 NZ_CP087690.1 Protein Homology CDS 1076159 1077232 . + 0 ID=cds-WP_038270238.1;Parent=gene-LPH58_RS04615;Dbxref=Genbank:WP_038270238.1;Name=WP_038270238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403948.1;locus_tag=LPH58_RS04615;product=alkene reductase;protein_id=WP_038270238.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1077243 1077980 . + . ID=gene-LPH58_RS04620;Name=LPH58_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04620;old_locus_tag=LPH58_04620 NZ_CP087690.1 Protein Homology CDS 1077243 1077980 . + 0 ID=cds-WP_038270235.1;Parent=gene-LPH58_RS04620;Dbxref=Genbank:WP_038270235.1;Name=WP_038270235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014403949.1;locus_tag=LPH58_RS04620;product=pirin family protein;protein_id=WP_038270235.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1078000 1078563 . + . ID=gene-LPH58_RS04625;Name=LPH58_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04625;old_locus_tag=LPH58_04625 NZ_CP087690.1 Protein Homology CDS 1078000 1078563 . + 0 ID=cds-WP_200866178.1;Parent=gene-LPH58_RS04625;Dbxref=Genbank:WP_200866178.1;Name=WP_200866178.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013053.2;locus_tag=LPH58_RS04625;product=isochorismatase family protein;protein_id=WP_200866178.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1078841 1079254 . - . ID=gene-LPH58_RS04630;Name=LPH58_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04630;old_locus_tag=LPH58_04630 NZ_CP087690.1 GeneMarkS-2+ CDS 1078841 1079254 . - 0 ID=cds-WP_038270232.1;Parent=gene-LPH58_RS04630;Dbxref=Genbank:WP_038270232.1;Name=WP_038270232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04630;product=hypothetical protein;protein_id=WP_038270232.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1079402 1080451 . + . ID=gene-LPH58_RS04635;Name=LPH58_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04635;old_locus_tag=LPH58_04635 NZ_CP087690.1 Protein Homology CDS 1079402 1080451 . + 0 ID=cds-WP_038270222.1;Parent=gene-LPH58_RS04635;Dbxref=Genbank:WP_038270222.1;Name=WP_038270222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851301.1;locus_tag=LPH58_RS04635;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_038270222.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1080544 1081509 . + . ID=gene-LPH58_RS04640;Name=LPH58_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04640;old_locus_tag=LPH58_04640 NZ_CP087690.1 Protein Homology CDS 1080544 1081509 . + 0 ID=cds-WP_038270221.1;Parent=gene-LPH58_RS04640;Dbxref=Genbank:WP_038270221.1;Name=WP_038270221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014402676.1;locus_tag=LPH58_RS04640;product=NADP-dependent oxidoreductase;protein_id=WP_038270221.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1081530 1081700 . + . ID=gene-LPH58_RS04645;Name=LPH58_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04645;old_locus_tag=LPH58_04645 NZ_CP087690.1 GeneMarkS-2+ CDS 1081530 1081700 . + 0 ID=cds-WP_160165118.1;Parent=gene-LPH58_RS04645;Dbxref=Genbank:WP_160165118.1;Name=WP_160165118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04645;product=hypothetical protein;protein_id=WP_160165118.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1082467 1082733 . + . ID=gene-LPH58_RS04650;Name=LPH58_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04650;old_locus_tag=LPH58_04650 NZ_CP087690.1 GeneMarkS-2+ CDS 1082467 1082733 . + 0 ID=cds-WP_152536567.1;Parent=gene-LPH58_RS04650;Dbxref=Genbank:WP_152536567.1;Name=WP_152536567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04650;product=hypothetical protein;protein_id=WP_152536567.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1082988 1083539 . + . ID=gene-LPH58_RS04655;Name=LPH58_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04655;old_locus_tag=LPH58_04655 NZ_CP087690.1 Protein Homology CDS 1082988 1083539 . + 0 ID=cds-WP_230428197.1;Parent=gene-LPH58_RS04655;Dbxref=Genbank:WP_230428197.1;Name=WP_230428197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090977.1;locus_tag=LPH58_RS04655;product=hypothetical protein;protein_id=WP_230428197.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1083706 1086810 . - . ID=gene-LPH58_RS04660;Name=LPH58_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04660;old_locus_tag=LPH58_04660 NZ_CP087690.1 Protein Homology CDS 1083706 1086810 . - 0 ID=cds-WP_038270212.1;Parent=gene-LPH58_RS04660;Dbxref=Genbank:WP_038270212.1;Name=WP_038270212.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852089.1;locus_tag=LPH58_RS04660;product=efflux RND transporter permease subunit;protein_id=WP_038270212.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1086899 1090126 . - . ID=gene-LPH58_RS04665;Name=LPH58_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04665;old_locus_tag=LPH58_04665 NZ_CP087690.1 Protein Homology CDS 1086899 1090126 . - 0 ID=cds-WP_038270209.1;Parent=gene-LPH58_RS04665;Dbxref=Genbank:WP_038270209.1;Name=WP_038270209.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852090.1;locus_tag=LPH58_RS04665;product=efflux RND transporter permease subunit;protein_id=WP_038270209.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1090194 1091432 . - . ID=gene-LPH58_RS04670;Name=LPH58_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04670;old_locus_tag=LPH58_04670 NZ_CP087690.1 Protein Homology CDS 1090194 1091432 . - 0 ID=cds-WP_038270206.1;Parent=gene-LPH58_RS04670;Dbxref=Genbank:WP_038270206.1;Name=WP_038270206.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016849343.1;locus_tag=LPH58_RS04670;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038270206.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1091617 1092432 . + . ID=gene-LPH58_RS04675;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LPH58_RS04675;old_locus_tag=LPH58_04675 NZ_CP087690.1 Protein Homology CDS 1091617 1092432 . + 0 ID=cds-WP_038270204.1;Parent=gene-LPH58_RS04675;Dbxref=Genbank:WP_038270204.1;Name=WP_038270204.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171998.1;locus_tag=LPH58_RS04675;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_038270204.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1093112 1093234 . + . ID=gene-LPH58_RS11960;Name=LPH58_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11960 NZ_CP087690.1 GeneMarkS-2+ CDS 1093112 1093234 . + 0 ID=cds-WP_267903177.1;Parent=gene-LPH58_RS11960;Dbxref=Genbank:WP_267903177.1;Name=WP_267903177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11960;product=hypothetical protein;protein_id=WP_267903177.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1093440 1093745 . - . ID=gene-LPH58_RS04680;Name=LPH58_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04680;old_locus_tag=LPH58_04680 NZ_CP087690.1 Protein Homology CDS 1093440 1093745 . - 0 ID=cds-WP_038270202.1;Parent=gene-LPH58_RS04680;Dbxref=Genbank:WP_038270202.1;Name=WP_038270202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090997.1;locus_tag=LPH58_RS04680;product=hypothetical protein;protein_id=WP_038270202.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1093742 1094068 . - . ID=gene-LPH58_RS04685;Name=LPH58_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04685;old_locus_tag=LPH58_04685 NZ_CP087690.1 GeneMarkS-2+ CDS 1093742 1094068 . - 0 ID=cds-WP_152536564.1;Parent=gene-LPH58_RS04685;Dbxref=Genbank:WP_152536564.1;Name=WP_152536564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04685;product=hypothetical protein;protein_id=WP_152536564.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1096118 1097545 . + . ID=gene-LPH58_RS04690;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LPH58_RS04690;old_locus_tag=LPH58_04690 NZ_CP087690.1 Protein Homology CDS 1096118 1097545 . + 0 ID=cds-WP_038270200.1;Parent=gene-LPH58_RS04690;Dbxref=Genbank:WP_038270200.1;Name=WP_038270200.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015277365.1;locus_tag=LPH58_RS04690;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_038270200.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1097848 1098495 . + . ID=gene-LPH58_RS04695;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LPH58_RS04695;old_locus_tag=LPH58_04695 NZ_CP087690.1 Protein Homology CDS 1097848 1098495 . + 0 ID=cds-WP_038270325.1;Parent=gene-LPH58_RS04695;Dbxref=Genbank:WP_038270325.1;Name=WP_038270325.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301096.1;locus_tag=LPH58_RS04695;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_038270325.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1099105 1100178 . + . ID=gene-LPH58_RS04700;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LPH58_RS04700;old_locus_tag=LPH58_04700 NZ_CP087690.1 Protein Homology CDS 1099105 1100178 . + 0 ID=cds-WP_038270194.1;Parent=gene-LPH58_RS04700;Dbxref=Genbank:WP_038270194.1;Name=WP_038270194.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912018.1;locus_tag=LPH58_RS04700;product=3-isopropylmalate dehydrogenase;protein_id=WP_038270194.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1100905 1101603 . + . ID=gene-LPH58_RS04705;Name=LPH58_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04705;old_locus_tag=LPH58_04705 NZ_CP087690.1 Protein Homology CDS 1100905 1101603 . + 0 ID=cds-WP_038270191.1;Parent=gene-LPH58_RS04705;Dbxref=Genbank:WP_038270191.1;Name=WP_038270191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085793.1;locus_tag=LPH58_RS04705;product=polysaccharide export protein;protein_id=WP_038270191.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1101585 1102985 . + . ID=gene-LPH58_RS04710;Name=LPH58_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04710;old_locus_tag=LPH58_04710 NZ_CP087690.1 Protein Homology CDS 1101585 1102985 . + 0 ID=cds-WP_171898076.1;Parent=gene-LPH58_RS04710;Dbxref=Genbank:WP_171898076.1;Name=WP_171898076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157116.1;locus_tag=LPH58_RS04710;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=WP_171898076.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1103219 1104673 . + . ID=gene-LPH58_RS04715;Name=LPH58_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04715;old_locus_tag=LPH58_04715 NZ_CP087690.1 Protein Homology CDS 1103219 1104673 . + 0 ID=cds-WP_038270186.1;Parent=gene-LPH58_RS04715;Dbxref=Genbank:WP_038270186.1;Name=WP_038270186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914017.1;locus_tag=LPH58_RS04715;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_038270186.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1104731 1105993 . + . ID=gene-LPH58_RS04720;Name=LPH58_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04720;old_locus_tag=LPH58_04720 NZ_CP087690.1 Protein Homology CDS 1104731 1105993 . + 0 ID=cds-WP_171898077.1;Parent=gene-LPH58_RS04720;Dbxref=Genbank:WP_171898077.1;Name=WP_171898077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017117349.1;locus_tag=LPH58_RS04720;product=polysaccharide biosynthesis protein GumE;protein_id=WP_171898077.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1105990 1107075 . + . ID=gene-LPH58_RS04725;Name=LPH58_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04725;old_locus_tag=LPH58_04725 NZ_CP087690.1 Protein Homology CDS 1105990 1107075 . + 0 ID=cds-WP_230428198.1;Parent=gene-LPH58_RS04725;Dbxref=Genbank:WP_230428198.1;Name=WP_230428198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098087.1;locus_tag=LPH58_RS04725;product=acyltransferase family protein;protein_id=WP_230428198.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1107522 1108664 . + . ID=gene-LPH58_RS04730;Name=LPH58_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04730;old_locus_tag=LPH58_04730 NZ_CP087690.1 Protein Homology CDS 1107522 1108664 . + 0 ID=cds-WP_038270324.1;Parent=gene-LPH58_RS04730;Dbxref=Genbank:WP_038270324.1;Name=WP_038270324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851288.1;locus_tag=LPH58_RS04730;product=glycosyltransferase family 4 protein;protein_id=WP_038270324.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1108904 1109275 . + . ID=gene-LPH58_RS04735;Name=LPH58_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04735;old_locus_tag=LPH58_04735 NZ_CP087690.1 GeneMarkS-2+ CDS 1108904 1109275 . + 0 ID=cds-WP_162814090.1;Parent=gene-LPH58_RS04735;Dbxref=Genbank:WP_162814090.1;Name=WP_162814090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS04735;product=hypothetical protein;protein_id=WP_162814090.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1109272 1110804 . + . ID=gene-LPH58_RS04740;Name=LPH58_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04740;old_locus_tag=LPH58_04740 NZ_CP087690.1 Protein Homology CDS 1109272 1110804 . + 0 ID=cds-WP_038270183.1;Parent=gene-LPH58_RS04740;Dbxref=Genbank:WP_038270183.1;Name=WP_038270183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851287.1;locus_tag=LPH58_RS04740;product=lipopolysaccharide biosynthesis protein;protein_id=WP_038270183.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1110924 1112057 . + . ID=gene-LPH58_RS04745;Name=LPH58_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04745;old_locus_tag=LPH58_04745 NZ_CP087690.1 Protein Homology CDS 1110924 1112057 . + 0 ID=cds-WP_038270322.1;Parent=gene-LPH58_RS04745;Dbxref=Genbank:WP_038270322.1;Name=WP_038270322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098085.1;locus_tag=LPH58_RS04745;product=glycosyltransferase;protein_id=WP_038270322.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1112921 1113691 . + . ID=gene-LPH58_RS04750;Name=LPH58_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04750;old_locus_tag=LPH58_04750 NZ_CP087690.1 Protein Homology CDS 1112921 1113691 . + 0 ID=cds-WP_051482240.1;Parent=gene-LPH58_RS04750;Dbxref=Genbank:WP_051482240.1;Name=WP_051482240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851285.1;locus_tag=LPH58_RS04750;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WP_051482240.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1113917 1114636 . - . ID=gene-LPH58_RS04755;Name=LPH58_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04755;old_locus_tag=LPH58_04755 NZ_CP087690.1 Protein Homology CDS 1113917 1114636 . - 0 ID=cds-WP_038270180.1;Parent=gene-LPH58_RS04755;Dbxref=Genbank:WP_038270180.1;Name=WP_038270180.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851284.1;locus_tag=LPH58_RS04755;product=response regulator;protein_id=WP_038270180.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1114827 1116158 . + . ID=gene-LPH58_RS04760;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LPH58_RS04760;old_locus_tag=LPH58_04760 NZ_CP087690.1 Protein Homology CDS 1114827 1116158 . + 0 ID=cds-WP_038270321.1;Parent=gene-LPH58_RS04760;Dbxref=Genbank:WP_038270321.1;Name=WP_038270321.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337972.1;locus_tag=LPH58_RS04760;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_038270321.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1116221 1116718 . + . ID=gene-LPH58_RS04765;Name=LPH58_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04765;old_locus_tag=LPH58_04765 NZ_CP087690.1 Protein Homology CDS 1116221 1116718 . + 0 ID=cds-WP_038270320.1;Parent=gene-LPH58_RS04765;Dbxref=Genbank:WP_038270320.1;Name=WP_038270320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851283.1;locus_tag=LPH58_RS04765;product=CYTH domain-containing protein;protein_id=WP_038270320.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1117005 1118012 . + . ID=gene-LPH58_RS04770;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LPH58_RS04770;old_locus_tag=LPH58_04770 NZ_CP087690.1 Protein Homology CDS 1117005 1118012 . + 0 ID=cds-WP_038270178.1;Parent=gene-LPH58_RS04770;Dbxref=Genbank:WP_038270178.1;Name=WP_038270178.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851282.1;locus_tag=LPH58_RS04770;product=beta-N-acetylhexosaminidase;protein_id=WP_038270178.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1118012 1118566 . + . ID=gene-LPH58_RS04775;Name=LPH58_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04775;old_locus_tag=LPH58_04775 NZ_CP087690.1 Protein Homology CDS 1118012 1118566 . + 0 ID=cds-WP_038270175.1;Parent=gene-LPH58_RS04775;Dbxref=Genbank:WP_038270175.1;Name=WP_038270175.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449878.1;locus_tag=LPH58_RS04775;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_038270175.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1118574 1119326 . + . ID=gene-LPH58_RS04780;Name=LPH58_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04780;old_locus_tag=LPH58_04780 NZ_CP087690.1 Protein Homology CDS 1118574 1119326 . + 0 ID=cds-WP_114867214.1;Parent=gene-LPH58_RS04780;Dbxref=Genbank:WP_114867214.1;Name=WP_114867214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408258.1;locus_tag=LPH58_RS04780;product=S-methyl-5'-thioinosine phosphorylase;protein_id=WP_114867214.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1119415 1119618 . + . ID=gene-LPH58_RS04785;Name=LPH58_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04785;old_locus_tag=LPH58_04785 NZ_CP087690.1 Protein Homology CDS 1119415 1119618 . + 0 ID=cds-WP_038270170.1;Parent=gene-LPH58_RS04785;Dbxref=Genbank:WP_038270170.1;Name=WP_038270170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003419650.1;locus_tag=LPH58_RS04785;product=cold-shock protein;protein_id=WP_038270170.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1121112 1123631 . + . ID=gene-LPH58_RS04790;Name=LPH58_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04790;old_locus_tag=LPH58_04790 NZ_CP087690.1 Protein Homology CDS 1121112 1123631 . + 0 ID=cds-WP_230428199.1;Parent=gene-LPH58_RS04790;Dbxref=Genbank:WP_230428199.1;Name=WP_230428199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894795.1;locus_tag=LPH58_RS04790;product=autotransporter domain-containing protein;protein_id=WP_230428199.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1123848 1124351 . - . ID=gene-LPH58_RS04795;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LPH58_RS04795;old_locus_tag=LPH58_04795 NZ_CP087690.1 Protein Homology CDS 1123848 1124351 . - 0 ID=cds-WP_038270168.1;Parent=gene-LPH58_RS04795;Dbxref=Genbank:WP_038270168.1;Name=WP_038270168.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011050971.1;locus_tag=LPH58_RS04795;product=SsrA-binding protein SmpB;protein_id=WP_038270168.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1124415 1124852 . + . ID=gene-LPH58_RS04800;Name=LPH58_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04800;old_locus_tag=LPH58_04800 NZ_CP087690.1 Protein Homology CDS 1124415 1124852 . + 0 ID=cds-WP_038270167.1;Parent=gene-LPH58_RS04800;Dbxref=Genbank:WP_038270167.1;Name=WP_038270167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894793.1;locus_tag=LPH58_RS04800;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_038270167.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1124849 1125103 . + . ID=gene-LPH58_RS04805;Name=LPH58_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04805;old_locus_tag=LPH58_04805 NZ_CP087690.1 Protein Homology CDS 1124849 1125103 . + 0 ID=cds-WP_038270165.1;Parent=gene-LPH58_RS04805;Dbxref=Genbank:WP_038270165.1;Name=WP_038270165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014089800.1;locus_tag=LPH58_RS04805;product=RnfH family protein;protein_id=WP_038270165.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1125132 1125524 . - . ID=gene-LPH58_RS04810;Name=LPH58_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04810;old_locus_tag=LPH58_04810 NZ_CP087690.1 Protein Homology CDS 1125132 1125524 . - 0 ID=cds-WP_038270157.1;Parent=gene-LPH58_RS04810;Dbxref=Genbank:WP_038270157.1;Name=WP_038270157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085841.1;locus_tag=LPH58_RS04810;product=outer membrane protein assembly factor BamE;protein_id=WP_038270157.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1125637 1126047 . + . ID=gene-LPH58_RS04815;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LPH58_RS04815;old_locus_tag=LPH58_04815 NZ_CP087690.1 Protein Homology CDS 1125637 1126047 . + 0 ID=cds-WP_038270156.1;Parent=gene-LPH58_RS04815;Dbxref=Genbank:WP_038270156.1;Name=WP_038270156.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804358.1;locus_tag=LPH58_RS04815;product=ferric iron uptake transcriptional regulator;protein_id=WP_038270156.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1126183 1127856 . - . ID=gene-LPH58_RS04820;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LPH58_RS04820;old_locus_tag=LPH58_04820 NZ_CP087690.1 Protein Homology CDS 1126183 1127856 . - 0 ID=cds-WP_038270155.1;Parent=gene-LPH58_RS04820;Dbxref=Genbank:WP_038270155.1;Name=WP_038270155.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894789.1;locus_tag=LPH58_RS04820;product=DNA repair protein RecN;protein_id=WP_038270155.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1127975 1129024 . + . ID=gene-LPH58_RS04825;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LPH58_RS04825;old_locus_tag=LPH58_04825 NZ_CP087690.1 Protein Homology CDS 1127975 1129024 . + 0 ID=cds-WP_038270316.1;Parent=gene-LPH58_RS04825;Dbxref=Genbank:WP_038270316.1;Name=WP_038270316.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237768.1;locus_tag=LPH58_RS04825;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_038270316.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1129145 1129663 . + . ID=gene-LPH58_RS04830;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LPH58_RS04830;old_locus_tag=LPH58_04830 NZ_CP087690.1 Protein Homology CDS 1129145 1129663 . + 0 ID=cds-WP_038270153.1;Parent=gene-LPH58_RS04830;Dbxref=Genbank:WP_038270153.1;Name=WP_038270153.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483633.1;locus_tag=LPH58_RS04830;product=nucleotide exchange factor GrpE;protein_id=WP_038270153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1129795 1131708 . + . ID=gene-LPH58_RS04835;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LPH58_RS04835;old_locus_tag=LPH58_04835 NZ_CP087690.1 Protein Homology CDS 1129795 1131708 . + 0 ID=cds-WP_038270151.1;Parent=gene-LPH58_RS04835;Dbxref=Genbank:WP_038270151.1;Name=WP_038270151.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010380232.1;locus_tag=LPH58_RS04835;product=molecular chaperone DnaK;protein_id=WP_038270151.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1131844 1132956 . + . ID=gene-LPH58_RS04840;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LPH58_RS04840;old_locus_tag=LPH58_04840 NZ_CP087690.1 Protein Homology CDS 1131844 1132956 . + 0 ID=cds-WP_114867099.1;Parent=gene-LPH58_RS04840;Dbxref=Genbank:WP_114867099.1;Name=WP_114867099.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438731.1;locus_tag=LPH58_RS04840;product=molecular chaperone DnaJ;protein_id=WP_114867099.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1133261 1134382 . + . ID=gene-LPH58_RS04845;Name=LPH58_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04845;old_locus_tag=LPH58_04845 NZ_CP087690.1 Protein Homology CDS 1133261 1134382 . + 0 ID=cds-WP_038270314.1;Parent=gene-LPH58_RS04845;Dbxref=Genbank:WP_038270314.1;Name=WP_038270314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098075.1;locus_tag=LPH58_RS04845;product=prephenate dehydrogenase;protein_id=WP_038270314.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1135740 1136453 . + . ID=gene-LPH58_RS04850;Name=LPH58_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04850;old_locus_tag=LPH58_04850 NZ_CP087690.1 Protein Homology CDS 1135740 1136453 . + 0 ID=cds-WP_038270312.1;Parent=gene-LPH58_RS04850;Dbxref=Genbank:WP_038270312.1;Name=WP_038270312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661106.1;locus_tag=LPH58_RS04850;product=response regulator transcription factor;protein_id=WP_038270312.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1136762 1137142 . + . ID=gene-LPH58_RS04855;Name=LPH58_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04855;old_locus_tag=LPH58_04855 NZ_CP087690.1 Protein Homology CDS 1136762 1137142 . + 0 ID=cds-WP_038270150.1;Parent=gene-LPH58_RS04855;Dbxref=Genbank:WP_038270150.1;Name=WP_038270150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811893.1;locus_tag=LPH58_RS04855;product=diacylglycerol kinase;protein_id=WP_038270150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1137229 1138134 . + . ID=gene-LPH58_RS04860;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LPH58_RS04860;old_locus_tag=LPH58_04860 NZ_CP087690.1 Protein Homology CDS 1137229 1138134 . + 0 ID=cds-WP_038270310.1;Parent=gene-LPH58_RS04860;Dbxref=Genbank:WP_038270310.1;Name=WP_038270310.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085861.1;locus_tag=LPH58_RS04860;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_038270310.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1138131 1138925 . + . ID=gene-LPH58_RS04865;Name=LPH58_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04865;old_locus_tag=LPH58_04865 NZ_CP087690.1 Protein Homology CDS 1138131 1138925 . + 0 ID=cds-WP_038270148.1;Parent=gene-LPH58_RS04865;Dbxref=Genbank:WP_038270148.1;Name=WP_038270148.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260172.1;locus_tag=LPH58_RS04865;product=thymidylate synthase;protein_id=WP_038270148.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1139248 1139748 . + . ID=gene-LPH58_RS04870;Name=LPH58_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04870;old_locus_tag=LPH58_04870 NZ_CP087690.1 Protein Homology CDS 1139248 1139748 . + 0 ID=cds-WP_038270308.1;Parent=gene-LPH58_RS04870;Dbxref=Genbank:WP_038270308.1;Name=WP_038270308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018974382.1;locus_tag=LPH58_RS04870;product=dihydrofolate reductase;protein_id=WP_038270308.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1140129 1140464 . - . ID=gene-LPH58_RS04875;Name=LPH58_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04875;old_locus_tag=LPH58_04875 NZ_CP087690.1 Protein Homology CDS 1140129 1140464 . - 0 ID=cds-WP_230428281.1;Parent=gene-LPH58_RS04875;Dbxref=Genbank:WP_230428281.1;Name=WP_230428281.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH58_RS04875;product=Tn3 family transposase;protein_id=WP_230428281.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1140583 1140771 . - . ID=gene-LPH58_RS04880;Name=LPH58_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04880;old_locus_tag=LPH58_04880 NZ_CP087690.1 Protein Homology CDS 1140583 1140771 . - 0 ID=cds-WP_230428200.1;Parent=gene-LPH58_RS04880;Dbxref=Genbank:WP_230428200.1;Name=WP_230428200.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH58_RS04880;product=transposase;protein_id=WP_230428200.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1141600 1142292 . - . ID=gene-LPH58_RS04885;Name=LPH58_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04885;old_locus_tag=LPH58_04885 NZ_CP087690.1 Protein Homology CDS 1141600 1142292 . - 0 ID=cds-WP_200866177.1;Parent=gene-LPH58_RS04885;Dbxref=Genbank:WP_200866177.1;Name=WP_200866177.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=LPH58_RS04885;product=response regulator;protein_id=WP_200866177.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1142289 1144850 . - . ID=gene-LPH58_RS04890;Name=LPH58_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04890;old_locus_tag=LPH58_04890 NZ_CP087690.1 Protein Homology CDS 1142289 1144850 . - 0 ID=cds-WP_230428201.1;Parent=gene-LPH58_RS04890;Dbxref=Genbank:WP_230428201.1;Name=WP_230428201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014728.2;locus_tag=LPH58_RS04890;product=sensor histidine kinase KdpD;protein_id=WP_230428201.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1144964 1145548 . - . ID=gene-LPH58_RS04895;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LPH58_RS04895;old_locus_tag=LPH58_04895 NZ_CP087690.1 Protein Homology CDS 1144964 1145548 . - 0 ID=cds-WP_038270142.1;Parent=gene-LPH58_RS04895;Dbxref=Genbank:WP_038270142.1;Name=WP_038270142.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007807711.1;locus_tag=LPH58_RS04895;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_038270142.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1145560 1147590 . - . ID=gene-LPH58_RS04900;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LPH58_RS04900;old_locus_tag=LPH58_04900 NZ_CP087690.1 Protein Homology CDS 1145560 1147590 . - 0 ID=cds-WP_038270140.1;Parent=gene-LPH58_RS04900;Dbxref=Genbank:WP_038270140.1;Name=WP_038270140.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018973802.1;locus_tag=LPH58_RS04900;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_038270140.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1147606 1149309 . - . ID=gene-LPH58_RS04905;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LPH58_RS04905;old_locus_tag=LPH58_04905 NZ_CP087690.1 Protein Homology CDS 1147606 1149309 . - 0 ID=cds-WP_038270138.1;Parent=gene-LPH58_RS04905;Dbxref=Genbank:WP_038270138.1;Name=WP_038270138.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017461263.1;locus_tag=LPH58_RS04905;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_038270138.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1149323 1149412 . - . ID=gene-LPH58_RS04910;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LPH58_RS04910;old_locus_tag=LPH58_04910 NZ_CP087690.1 Protein Homology CDS 1149323 1149412 . - 0 ID=cds-WP_038270136.1;Parent=gene-LPH58_RS04910;Dbxref=Genbank:WP_038270136.1;Name=WP_038270136.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007681729.1;locus_tag=LPH58_RS04910;product=K(+)-transporting ATPase subunit F;protein_id=WP_038270136.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1149518 1150363 . - . ID=gene-LPH58_RS04915;Name=LPH58_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04915;old_locus_tag=LPH58_04915 NZ_CP087690.1 Protein Homology CDS 1149518 1150363 . - 0 ID=cds-WP_114867100.1;Parent=gene-LPH58_RS04915;Dbxref=Genbank:WP_114867100.1;Name=WP_114867100.1;Ontology_term=GO:0015288;gbkey=CDS;go_function=porin activity|0015288||IEA;inference=COORDINATES: protein motif:HMM:TIGR02001.1;locus_tag=LPH58_RS04915;product=TorF family putative porin;protein_id=WP_114867100.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1152028 1152909 . - . ID=gene-LPH58_RS04920;Name=LPH58_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04920;old_locus_tag=LPH58_04920 NZ_CP087690.1 Protein Homology CDS 1152028 1152909 . - 0 ID=cds-WP_038270133.1;Parent=gene-LPH58_RS04920;Dbxref=Genbank:WP_038270133.1;Name=WP_038270133.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852663.1;locus_tag=LPH58_RS04920;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_038270133.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1152923 1153306 . - . ID=gene-LPH58_RS04925;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LPH58_RS04925;old_locus_tag=LPH58_04925 NZ_CP087690.1 Protein Homology CDS 1152923 1153306 . - 0 ID=cds-WP_038270131.1;Parent=gene-LPH58_RS04925;Dbxref=Genbank:WP_038270131.1;Name=WP_038270131.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894598.1;locus_tag=LPH58_RS04925;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_038270131.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1153343 1154140 . - . ID=gene-LPH58_RS04930;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LPH58_RS04930;old_locus_tag=LPH58_04930 NZ_CP087690.1 Protein Homology CDS 1153343 1154140 . - 0 ID=cds-WP_038270130.1;Parent=gene-LPH58_RS04930;Dbxref=Genbank:WP_038270130.1;Name=WP_038270130.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894597.1;locus_tag=LPH58_RS04930;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_038270130.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1155290 1155922 . - . ID=gene-LPH58_RS04935;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=LPH58_RS04935;old_locus_tag=LPH58_04935 NZ_CP087690.1 Protein Homology CDS 1155290 1155922 . - 0 ID=cds-WP_038270127.1;Parent=gene-LPH58_RS04935;Dbxref=Genbank:WP_038270127.1;Name=WP_038270127.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=exoribonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086100.1;locus_tag=LPH58_RS04935;product=ribonuclease T;protein_id=WP_038270127.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1156168 1156878 . - . ID=gene-LPH58_RS04940;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LPH58_RS04940;old_locus_tag=LPH58_04940 NZ_CP087690.1 Protein Homology CDS 1156168 1156878 . - 0 ID=cds-WP_038270125.1;Parent=gene-LPH58_RS04940;Dbxref=Genbank:WP_038270125.1;Name=WP_038270125.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894594.1;locus_tag=LPH58_RS04940;product=phosphate signaling complex protein PhoU;protein_id=WP_038270125.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1156897 1157727 . - . ID=gene-LPH58_RS04945;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LPH58_RS04945;old_locus_tag=LPH58_04945 NZ_CP087690.1 Protein Homology CDS 1156897 1157727 . - 0 ID=cds-WP_038270123.1;Parent=gene-LPH58_RS04945;Dbxref=Genbank:WP_038270123.1;Name=WP_038270123.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237787.1;locus_tag=LPH58_RS04945;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_038270123.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1157748 1158611 . - . ID=gene-LPH58_RS04950;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LPH58_RS04950;old_locus_tag=LPH58_04950 NZ_CP087690.1 Protein Homology CDS 1157748 1158611 . - 0 ID=cds-WP_038270121.1;Parent=gene-LPH58_RS04950;Dbxref=Genbank:WP_038270121.1;Name=WP_038270121.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155848.1;locus_tag=LPH58_RS04950;product=phosphate ABC transporter permease PstA;protein_id=WP_038270121.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1158611 1159585 . - . ID=gene-LPH58_RS04955;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LPH58_RS04955;old_locus_tag=LPH58_04955 NZ_CP087690.1 Protein Homology CDS 1158611 1159585 . - 0 ID=cds-WP_038270116.1;Parent=gene-LPH58_RS04955;Dbxref=Genbank:WP_038270116.1;Name=WP_038270116.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572163.1;locus_tag=LPH58_RS04955;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_038270116.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1159697 1160791 . - . ID=gene-LPH58_RS04960;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LPH58_RS04960;old_locus_tag=LPH58_04960 NZ_CP087690.1 Protein Homology CDS 1159697 1160791 . - 0 ID=cds-WP_038270114.1;Parent=gene-LPH58_RS04960;Dbxref=Genbank:WP_038270114.1;Name=WP_038270114.1;Ontology_term=GO:0015415,GO:0042301,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=pstS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA,phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966222.1;locus_tag=LPH58_RS04960;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_038270114.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1161269 1162963 . - . ID=gene-LPH58_RS04965;Name=LPH58_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04965;old_locus_tag=LPH58_04965 NZ_CP087690.1 Protein Homology CDS 1161269 1162963 . - 0 ID=cds-WP_038270112.1;Parent=gene-LPH58_RS04965;Dbxref=Genbank:WP_038270112.1;Name=WP_038270112.1;Ontology_term=GO:0006813,GO:0008324,GO:0015299,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cation transmembrane transporter activity|0008324||IEA,solute:proton antiporter activity|0015299||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088642.1;locus_tag=LPH58_RS04965;product=Kef family K(+) transporter;protein_id=WP_038270112.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1163678 1166041 . - . ID=gene-LPH58_RS04970;Name=LPH58_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04970;old_locus_tag=LPH58_04970 NZ_CP087690.1 Protein Homology CDS 1163678 1166041 . - 0 ID=cds-WP_038270110.1;Parent=gene-LPH58_RS04970;Dbxref=Genbank:WP_038270110.1;Name=WP_038270110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086090.1;locus_tag=LPH58_RS04970;product=TonB-dependent receptor;protein_id=WP_038270110.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1167375 1168046 . + . ID=gene-LPH58_RS04975;Name=LPH58_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04975;old_locus_tag=LPH58_04975 NZ_CP087690.1 Protein Homology CDS 1167375 1168046 . + 0 ID=cds-WP_038270092.1;Parent=gene-LPH58_RS04975;Dbxref=Genbank:WP_038270092.1;Name=WP_038270092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088644.1;locus_tag=LPH58_RS04975;product=DsbA family oxidoreductase;protein_id=WP_038270092.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1168137 1170412 . - . ID=gene-LPH58_RS04980;Name=LPH58_RS04980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS04980;old_locus_tag=LPH58_04980;pseudo=true NZ_CP087690.1 Protein Homology CDS 1168137 1170412 . - 0 ID=cds-LPH58_RS04980;Parent=gene-LPH58_RS04980;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097995.1;locus_tag=LPH58_RS04980;product=TonB-dependent receptor;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1170565 1172502 . + . ID=gene-LPH58_RS04985;Name=LPH58_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS04985;old_locus_tag=LPH58_04985 NZ_CP087690.1 Protein Homology CDS 1170565 1172502 . + 0 ID=cds-WP_038270089.1;Parent=gene-LPH58_RS04985;Dbxref=Genbank:WP_038270089.1;Name=WP_038270089.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005924596.1;locus_tag=LPH58_RS04985;product=ATP-binding cassette domain-containing protein;protein_id=WP_038270089.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1174257 1174330 . - . ID=gene-LPH58_RS04990;Name=LPH58_RS04990;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS04990;old_locus_tag=LPH58_04990 NZ_CP087690.1 tRNAscan-SE tRNA 1174257 1174330 . - . ID=rna-LPH58_RS04990;Parent=gene-LPH58_RS04990;anticodon=(pos:complement(1174296..1174298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04990;product=tRNA-Cys NZ_CP087690.1 tRNAscan-SE exon 1174257 1174330 . - . ID=exon-LPH58_RS04990-1;Parent=rna-LPH58_RS04990;anticodon=(pos:complement(1174296..1174298));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04990;product=tRNA-Cys NZ_CP087690.1 RefSeq gene 1174401 1174476 . - . ID=gene-LPH58_RS04995;Name=LPH58_RS04995;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS04995;old_locus_tag=LPH58_04995 NZ_CP087690.1 tRNAscan-SE tRNA 1174401 1174476 . - . ID=rna-LPH58_RS04995;Parent=gene-LPH58_RS04995;anticodon=(pos:complement(1174441..1174443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04995;product=tRNA-Gly NZ_CP087690.1 tRNAscan-SE exon 1174401 1174476 . - . ID=exon-LPH58_RS04995-1;Parent=rna-LPH58_RS04995;anticodon=(pos:complement(1174441..1174443));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS04995;product=tRNA-Gly NZ_CP087690.1 RefSeq gene 1174513 1175148 . - . ID=gene-LPH58_RS05000;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LPH58_RS05000;old_locus_tag=LPH58_05000 NZ_CP087690.1 Protein Homology CDS 1174513 1175148 . - 0 ID=cds-WP_038270086.1;Parent=gene-LPH58_RS05000;Dbxref=Genbank:WP_038270086.1;Name=WP_038270086.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894757.1;locus_tag=LPH58_RS05000;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_038270086.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1175148 1177010 . - . ID=gene-LPH58_RS05005;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LPH58_RS05005;old_locus_tag=LPH58_05005 NZ_CP087690.1 Protein Homology CDS 1175148 1177010 . - 0 ID=cds-WP_038270083.1;Parent=gene-LPH58_RS05005;Dbxref=Genbank:WP_038270083.1;Name=WP_038270083.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098050.1;locus_tag=LPH58_RS05005;product=excinuclease ABC subunit UvrC;protein_id=WP_038270083.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1177844 1178308 . - . ID=gene-LPH58_RS05010;Name=LPH58_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05010;old_locus_tag=LPH58_05010 NZ_CP087690.1 Protein Homology CDS 1177844 1178308 . - 0 ID=cds-WP_038270078.1;Parent=gene-LPH58_RS05010;Dbxref=Genbank:WP_038270078.1;Name=WP_038270078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005916712.1;locus_tag=LPH58_RS05010;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WP_038270078.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1178305 1179078 . - . ID=gene-LPH58_RS05015;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LPH58_RS05015;old_locus_tag=LPH58_05015 NZ_CP087690.1 Protein Homology CDS 1178305 1179078 . - 0 ID=cds-WP_038270076.1;Parent=gene-LPH58_RS05015;Dbxref=Genbank:WP_038270076.1;Name=WP_038270076.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852623.1;locus_tag=LPH58_RS05015;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_038270076.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1180085 1180972 . + . ID=gene-LPH58_RS05020;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LPH58_RS05020;old_locus_tag=LPH58_05020 NZ_CP087690.1 Protein Homology CDS 1180085 1180972 . + 0 ID=cds-WP_051482243.1;Parent=gene-LPH58_RS05020;Dbxref=Genbank:WP_051482243.1;Name=WP_051482243.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852622.1;locus_tag=LPH58_RS05020;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_051482243.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1181133 1182440 . - . ID=gene-LPH58_RS05025;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LPH58_RS05025;old_locus_tag=LPH58_05025 NZ_CP087690.1 Protein Homology CDS 1181133 1182440 . - 0 ID=cds-WP_038270070.1;Parent=gene-LPH58_RS05025;Dbxref=Genbank:WP_038270070.1;Name=WP_038270070.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085701.1;locus_tag=LPH58_RS05025;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_038270070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1183452 1184300 . + . ID=gene-LPH58_RS05030;Name=LPH58_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05030;old_locus_tag=LPH58_05030 NZ_CP087690.1 Protein Homology CDS 1183452 1184300 . + 0 ID=cds-WP_081755396.1;Parent=gene-LPH58_RS05030;Dbxref=Genbank:WP_081755396.1;Name=WP_081755396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340307.1;locus_tag=LPH58_RS05030;product=DNA/RNA non-specific endonuclease;protein_id=WP_081755396.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1184215 1185219 . - . ID=gene-LPH58_RS05035;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LPH58_RS05035;old_locus_tag=LPH58_05035 NZ_CP087690.1 Protein Homology CDS 1184215 1185219 . - 0 ID=cds-WP_038270065.1;Parent=gene-LPH58_RS05035;Dbxref=Genbank:WP_038270065.1;Name=WP_038270065.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852618.1;locus_tag=LPH58_RS05035;product=porphobilinogen synthase;protein_id=WP_038270065.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1185932 1186402 . + . ID=gene-LPH58_RS05040;Name=LPH58_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05040;old_locus_tag=LPH58_05040 NZ_CP087690.1 Protein Homology CDS 1185932 1186402 . + 0 ID=cds-WP_081755393.1;Parent=gene-LPH58_RS05040;Dbxref=Genbank:WP_081755393.1;Name=WP_081755393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808472.1;locus_tag=LPH58_RS05040;product=hypothetical protein;protein_id=WP_081755393.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1186620 1187405 . + . ID=gene-LPH58_RS05045;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LPH58_RS05045;old_locus_tag=LPH58_05045 NZ_CP087690.1 Protein Homology CDS 1186620 1187405 . + 0 ID=cds-WP_038270300.1;Parent=gene-LPH58_RS05045;Dbxref=Genbank:WP_038270300.1;Name=WP_038270300.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346074.1;locus_tag=LPH58_RS05045;product=3-oxoadipate enol-lactonase;protein_id=WP_038270300.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1187483 1188265 . - . ID=gene-LPH58_RS05050;Name=LPH58_RS05050;end_range=1188265,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS05050;old_locus_tag=LPH58_05050;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 1187483 1188265 . - 0 ID=cds-LPH58_RS05050;Parent=gene-LPH58_RS05050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=1188265,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908152.1;locus_tag=LPH58_RS05050;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1188776 1189207 . - . ID=gene-LPH58_RS05055;Name=LPH58_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05055;old_locus_tag=LPH58_05055 NZ_CP087690.1 GeneMarkS-2+ CDS 1188776 1189207 . - 0 ID=cds-WP_038270055.1;Parent=gene-LPH58_RS05055;Dbxref=Genbank:WP_038270055.1;Name=WP_038270055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05055;product=hypothetical protein;protein_id=WP_038270055.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1189512 1191401 . - . ID=gene-LPH58_RS05060;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LPH58_RS05060;old_locus_tag=LPH58_05060 NZ_CP087690.1 Protein Homology CDS 1189512 1191401 . - 0 ID=cds-WP_038270052.1;Parent=gene-LPH58_RS05060;Dbxref=Genbank:WP_038270052.1;Name=WP_038270052.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437137.1;locus_tag=LPH58_RS05060;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_038270052.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1192681 1192848 . + . ID=gene-LPH58_RS05065;Name=LPH58_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05065;old_locus_tag=LPH58_05065 NZ_CP087690.1 GeneMarkS-2+ CDS 1192681 1192848 . + 0 ID=cds-WP_160165115.1;Parent=gene-LPH58_RS05065;Dbxref=Genbank:WP_160165115.1;Name=WP_160165115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05065;product=hypothetical protein;protein_id=WP_160165115.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1193005 1193601 . + . ID=gene-LPH58_RS05070;Name=LPH58_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05070;old_locus_tag=LPH58_05070 NZ_CP087690.1 Protein Homology CDS 1193005 1193601 . + 0 ID=cds-WP_230428282.1;Parent=gene-LPH58_RS05070;Dbxref=Genbank:WP_230428282.1;Name=WP_230428282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097781.1;locus_tag=LPH58_RS05070;product=YdcF family protein;protein_id=WP_230428282.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1194586 1195491 . - . ID=gene-LPH58_RS05075;Name=lpxO;gbkey=Gene;gene=lpxO;gene_biotype=protein_coding;locus_tag=LPH58_RS05075;old_locus_tag=LPH58_05075 NZ_CP087690.1 Protein Homology CDS 1194586 1195491 . - 0 ID=cds-WP_038270046.1;Parent=gene-LPH58_RS05075;Dbxref=Genbank:WP_038270046.1;Name=WP_038270046.1;Ontology_term=GO:0018193;gbkey=CDS;gene=lpxO;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014404353.1;locus_tag=LPH58_RS05075;product=lipid A hydroxylase LpxO;protein_id=WP_038270046.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1195567 1196454 . - . ID=gene-LPH58_RS05080;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=LPH58_RS05080;old_locus_tag=LPH58_05080 NZ_CP087690.1 Protein Homology CDS 1195567 1196454 . - 0 ID=cds-WP_038270294.1;Parent=gene-LPH58_RS05080;Dbxref=Genbank:WP_038270294.1;Name=WP_038270294.1;Ontology_term=GO:0009102,GO:0008171;gbkey=CDS;gene=bioC;go_function=O-methyltransferase activity|0008171||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851129.1;locus_tag=LPH58_RS05080;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_038270294.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1196849 1196986 . + . ID=gene-LPH58_RS05085;Name=LPH58_RS05085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS05085;old_locus_tag=LPH58_05085;partial=true;pseudo=true;start_range=.,1196849 NZ_CP087690.1 Protein Homology CDS 1196849 1196986 . + 0 ID=cds-LPH58_RS05085;Parent=gene-LPH58_RS05085;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LPH58_RS05085;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1196849;transl_table=11 NZ_CP087690.1 RefSeq gene 1197844 1198068 . - . ID=gene-LPH58_RS05090;Name=LPH58_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05090;old_locus_tag=LPH58_05090 NZ_CP087690.1 Protein Homology CDS 1197844 1198068 . - 0 ID=cds-WP_038270037.1;Parent=gene-LPH58_RS05090;Dbxref=Genbank:WP_038270037.1;Name=WP_038270037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097784.1;locus_tag=LPH58_RS05090;product=hypothetical protein;protein_id=WP_038270037.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1198452 1199012 . + . ID=gene-LPH58_RS05095;Name=LPH58_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05095;old_locus_tag=LPH58_05095 NZ_CP087690.1 Protein Homology CDS 1198452 1199012 . + 0 ID=cds-WP_162814091.1;Parent=gene-LPH58_RS05095;Dbxref=Genbank:WP_162814091.1;Name=WP_162814091.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013670.2;locus_tag=LPH58_RS05095;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_162814091.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1199165 1200070 . + . ID=gene-LPH58_RS05100;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LPH58_RS05100;old_locus_tag=LPH58_05100 NZ_CP087690.1 Protein Homology CDS 1199165 1200070 . + 0 ID=cds-WP_171898079.1;Parent=gene-LPH58_RS05100;Dbxref=Genbank:WP_171898079.1;Name=WP_171898079.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051138.1;locus_tag=LPH58_RS05100;product=GTP cyclohydrolase FolE2;protein_id=WP_171898079.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1200133 1200693 . + . ID=gene-LPH58_RS05105;Name=LPH58_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05105;old_locus_tag=LPH58_05105 NZ_CP087690.1 Protein Homology CDS 1200133 1200693 . + 0 ID=cds-WP_038270030.1;Parent=gene-LPH58_RS05105;Dbxref=Genbank:WP_038270030.1;Name=WP_038270030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382543.1;locus_tag=LPH58_RS05105;product=carbonate dehydratase;protein_id=WP_038270030.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1200889 1204056 . - . ID=gene-LPH58_RS05110;Name=LPH58_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05110;old_locus_tag=LPH58_05110 NZ_CP087690.1 Protein Homology CDS 1200889 1204056 . - 0 ID=cds-WP_038270028.1;Parent=gene-LPH58_RS05110;Dbxref=Genbank:WP_038270028.1;Name=WP_038270028.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851125.1;locus_tag=LPH58_RS05110;product=multidrug efflux RND transporter permease subunit;protein_id=WP_038270028.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1204071 1205264 . - . ID=gene-LPH58_RS05115;Name=LPH58_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05115;old_locus_tag=LPH58_05115 NZ_CP087690.1 Protein Homology CDS 1204071 1205264 . - 0 ID=cds-WP_038270025.1;Parent=gene-LPH58_RS05115;Dbxref=Genbank:WP_038270025.1;Name=WP_038270025.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086749.1;locus_tag=LPH58_RS05115;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_038270025.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1206308 1211299 . + . ID=gene-LPH58_RS05120;Name=LPH58_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05120;old_locus_tag=LPH58_05120 NZ_CP087690.1 Protein Homology CDS 1206308 1211299 . + 0 ID=cds-WP_038270022.1;Parent=gene-LPH58_RS05120;Dbxref=Genbank:WP_038270022.1;Name=WP_038270022.1;Ontology_term=GO:0019551,GO:0004352;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;go_process=glutamate catabolic process to 2-oxoglutarate|0019551||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851123.1;locus_tag=LPH58_RS05120;product=NAD-glutamate dehydrogenase;protein_id=WP_038270022.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1211395 1212162 . + . ID=gene-LPH58_RS05125;Name=LPH58_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05125;old_locus_tag=LPH58_05125 NZ_CP087690.1 Protein Homology CDS 1211395 1212162 . + 0 ID=cds-WP_038270019.1;Parent=gene-LPH58_RS05125;Dbxref=Genbank:WP_038270019.1;Name=WP_038270019.1;Ontology_term=GO:0006741,GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA,NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919766.1;locus_tag=LPH58_RS05125;product=NAD kinase;protein_id=WP_038270019.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1212248 1213207 . + . ID=gene-LPH58_RS05130;Name=LPH58_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05130;old_locus_tag=LPH58_05130 NZ_CP087690.1 Protein Homology CDS 1212248 1213207 . + 0 ID=cds-WP_038270016.1;Parent=gene-LPH58_RS05130;Dbxref=Genbank:WP_038270016.1;Name=WP_038270016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894542.1;locus_tag=LPH58_RS05130;product=5'-nucleotidase;protein_id=WP_038270016.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1213667 1214125 . - . ID=gene-LPH58_RS05135;Name=LPH58_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05135;old_locus_tag=LPH58_05135 NZ_CP087690.1 GeneMarkS-2+ CDS 1213667 1214125 . - 0 ID=cds-WP_038270011.1;Parent=gene-LPH58_RS05135;Dbxref=Genbank:WP_038270011.1;Name=WP_038270011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05135;product=hypothetical protein;protein_id=WP_038270011.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1214856 1215275 . + . ID=gene-LPH58_RS05140;Name=LPH58_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05140;old_locus_tag=LPH58_05140 NZ_CP087690.1 Protein Homology CDS 1214856 1215275 . + 0 ID=cds-WP_038270292.1;Parent=gene-LPH58_RS05140;Dbxref=Genbank:WP_038270292.1;Name=WP_038270292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086769.1;locus_tag=LPH58_RS05140;product=cupin domain-containing protein;protein_id=WP_038270292.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1216370 1217428 . - . ID=gene-LPH58_RS05145;Name=LPH58_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05145;old_locus_tag=LPH58_05145 NZ_CP087690.1 Protein Homology CDS 1216370 1217428 . - 0 ID=cds-WP_051482238.1;Parent=gene-LPH58_RS05145;Dbxref=Genbank:WP_051482238.1;Name=WP_051482238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894481.1;locus_tag=LPH58_RS05145;product=MBL fold metallo-hydrolase;protein_id=WP_051482238.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1217869 1218555 . - . ID=gene-LPH58_RS05150;Name=LPH58_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05150;old_locus_tag=LPH58_05150 NZ_CP087690.1 Protein Homology CDS 1217869 1218555 . - 0 ID=cds-WP_038270005.1;Parent=gene-LPH58_RS05150;Dbxref=Genbank:WP_038270005.1;Name=WP_038270005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996685.1;locus_tag=LPH58_RS05150;product=TIGR02453 family protein;protein_id=WP_038270005.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1218552 1219997 . - . ID=gene-LPH58_RS05155;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=LPH58_RS05155;old_locus_tag=LPH58_05155 NZ_CP087690.1 Protein Homology CDS 1218552 1219997 . - 0 ID=cds-WP_038270002.1;Parent=gene-LPH58_RS05155;Dbxref=Genbank:WP_038270002.1;Name=WP_038270002.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008852;gbkey=CDS;gene=sbcB;go_function=3'-5'-exoribonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,exodeoxyribonuclease I activity|0008852||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010366550.1;locus_tag=LPH58_RS05155;product=exodeoxyribonuclease I;protein_id=WP_038270002.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1220360 1220518 . + . ID=gene-LPH58_RS05160;Name=LPH58_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05160;old_locus_tag=LPH58_05160 NZ_CP087690.1 GeneMarkS-2+ CDS 1220360 1220518 . + 0 ID=cds-WP_160165114.1;Parent=gene-LPH58_RS05160;Dbxref=Genbank:WP_160165114.1;Name=WP_160165114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05160;product=hypothetical protein;protein_id=WP_160165114.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1221512 1221724 . + . ID=gene-LPH58_RS05165;Name=LPH58_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05165;old_locus_tag=LPH58_05165 NZ_CP087690.1 GeneMarkS-2+ CDS 1221512 1221724 . + 0 ID=cds-WP_051482237.1;Parent=gene-LPH58_RS05165;Dbxref=Genbank:WP_051482237.1;Name=WP_051482237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05165;product=hypothetical protein;protein_id=WP_051482237.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1221742 1221900 . + . ID=gene-LPH58_RS05170;Name=LPH58_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05170;old_locus_tag=LPH58_05170 NZ_CP087690.1 GeneMarkS-2+ CDS 1221742 1221900 . + 0 ID=cds-WP_230428202.1;Parent=gene-LPH58_RS05170;Dbxref=Genbank:WP_230428202.1;Name=WP_230428202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05170;product=hypothetical protein;protein_id=WP_230428202.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1222646 1224304 . + . ID=gene-LPH58_RS05175;Name=LPH58_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05175;old_locus_tag=LPH58_05175 NZ_CP087690.1 Protein Homology CDS 1222646 1224304 . + 0 ID=cds-WP_201745787.1;Parent=gene-LPH58_RS05175;Dbxref=Genbank:WP_201745787.1;Name=WP_201745787.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385;gbkey=CDS;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008573327.1;locus_tag=LPH58_RS05175;product=Na+/H+ antiporter;protein_id=WP_201745787.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1224701 1225249 . + . ID=gene-LPH58_RS05180;Name=LPH58_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05180;old_locus_tag=LPH58_05180 NZ_CP087690.1 Protein Homology CDS 1224701 1225249 . + 0 ID=cds-WP_038269994.1;Parent=gene-LPH58_RS05180;Dbxref=Genbank:WP_038269994.1;Name=WP_038269994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452585.1;locus_tag=LPH58_RS05180;product=hypothetical protein;protein_id=WP_038269994.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1225453 1226100 . - . ID=gene-LPH58_RS05185;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LPH58_RS05185;old_locus_tag=LPH58_05185 NZ_CP087690.1 Protein Homology CDS 1225453 1226100 . - 0 ID=cds-WP_038269991.1;Parent=gene-LPH58_RS05185;Dbxref=Genbank:WP_038269991.1;Name=WP_038269991.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994531.1;locus_tag=LPH58_RS05185;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_038269991.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1226159 1226629 . - . ID=gene-LPH58_RS05190;Name=LPH58_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05190;old_locus_tag=LPH58_05190 NZ_CP087690.1 Protein Homology CDS 1226159 1226629 . - 0 ID=cds-WP_038269989.1;Parent=gene-LPH58_RS05190;Dbxref=Genbank:WP_038269989.1;Name=WP_038269989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091182.1;locus_tag=LPH58_RS05190;product=EVE domain-containing protein;protein_id=WP_038269989.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1226626 1227213 . - . ID=gene-LPH58_RS05195;Name=LPH58_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05195;old_locus_tag=LPH58_05195 NZ_CP087690.1 Protein Homology CDS 1226626 1227213 . - 0 ID=cds-WP_038269986.1;Parent=gene-LPH58_RS05195;Dbxref=Genbank:WP_038269986.1;Name=WP_038269986.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091180.1;locus_tag=LPH58_RS05195;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_038269986.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1228215 1228399 . - . ID=gene-LPH58_RS05200;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LPH58_RS05200;old_locus_tag=LPH58_05200 NZ_CP087690.1 cmsearch ncRNA 1228215 1228399 . - . ID=rna-LPH58_RS05200;Parent=gene-LPH58_RS05200;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS05200;product=6S RNA NZ_CP087690.1 cmsearch exon 1228215 1228399 . - . ID=exon-LPH58_RS05200-1;Parent=rna-LPH58_RS05200;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS05200;product=6S RNA NZ_CP087690.1 RefSeq gene 1228501 1228800 . - . ID=gene-LPH58_RS05205;Name=LPH58_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05205;old_locus_tag=LPH58_05205 NZ_CP087690.1 Protein Homology CDS 1228501 1228800 . - 0 ID=cds-WP_038269984.1;Parent=gene-LPH58_RS05205;Dbxref=Genbank:WP_038269984.1;Name=WP_038269984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894469.1;locus_tag=LPH58_RS05205;product=cell division protein ZapA;protein_id=WP_038269984.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1228797 1229018 . - . ID=gene-LPH58_RS05210;Name=LPH58_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05210;old_locus_tag=LPH58_05210 NZ_CP087690.1 Protein Homology CDS 1228797 1229018 . - 0 ID=cds-WP_038269981.1;Parent=gene-LPH58_RS05210;Dbxref=Genbank:WP_038269981.1;Name=WP_038269981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812462.1;locus_tag=LPH58_RS05210;product=TIGR02449 family protein;protein_id=WP_038269981.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1229177 1229719 . + . ID=gene-LPH58_RS05215;Name=LPH58_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05215;old_locus_tag=LPH58_05215 NZ_CP087690.1 Protein Homology CDS 1229177 1229719 . + 0 ID=cds-WP_038269978.1;Parent=gene-LPH58_RS05215;Dbxref=Genbank:WP_038269978.1;Name=WP_038269978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156855.1;locus_tag=LPH58_RS05215;product=YecA family protein;protein_id=WP_038269978.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1229728 1231056 . + . ID=gene-LPH58_RS05220;Name=LPH58_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05220;old_locus_tag=LPH58_05220 NZ_CP087690.1 Protein Homology CDS 1229728 1231056 . + 0 ID=cds-WP_038269975.1;Parent=gene-LPH58_RS05220;Dbxref=Genbank:WP_038269975.1;Name=WP_038269975.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085379.1;locus_tag=LPH58_RS05220;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_038269975.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1231166 1231717 . - . ID=gene-LPH58_RS05225;Name=LPH58_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05225;old_locus_tag=LPH58_05225 NZ_CP087690.1 Protein Homology CDS 1231166 1231717 . - 0 ID=cds-WP_038269973.1;Parent=gene-LPH58_RS05225;Dbxref=Genbank:WP_038269973.1;Name=WP_038269973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382549.1;locus_tag=LPH58_RS05225;product=NUDIX hydrolase;protein_id=WP_038269973.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1231994 1232284 . + . ID=gene-LPH58_RS05230;Name=LPH58_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05230;old_locus_tag=LPH58_05230 NZ_CP087690.1 GeneMarkS-2+ CDS 1231994 1232284 . + 0 ID=cds-WP_038269970.1;Parent=gene-LPH58_RS05230;Dbxref=Genbank:WP_038269970.1;Name=WP_038269970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05230;product=hypothetical protein;protein_id=WP_038269970.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1232793 1233368 . - . ID=gene-LPH58_RS05235;Name=LPH58_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05235;old_locus_tag=LPH58_05235 NZ_CP087690.1 Protein Homology CDS 1232793 1233368 . - 0 ID=cds-WP_038269967.1;Parent=gene-LPH58_RS05235;Dbxref=Genbank:WP_038269967.1;Name=WP_038269967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091174.1;locus_tag=LPH58_RS05235;product=nitroreductase;protein_id=WP_038269967.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1233553 1234935 . + . ID=gene-LPH58_RS05240;Name=LPH58_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05240;old_locus_tag=LPH58_05240 NZ_CP087690.1 Protein Homology CDS 1233553 1234935 . + 0 ID=cds-WP_081755389.1;Parent=gene-LPH58_RS05240;Dbxref=Genbank:WP_081755389.1;Name=WP_081755389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851083.1;locus_tag=LPH58_RS05240;product=DUF1631 family protein;protein_id=WP_081755389.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1235200 1237464 . + . ID=gene-LPH58_RS05245;Name=LPH58_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05245;old_locus_tag=LPH58_05245 NZ_CP087690.1 Protein Homology CDS 1235200 1237464 . + 0 ID=cds-WP_038270283.1;Parent=gene-LPH58_RS05245;Dbxref=Genbank:WP_038270283.1;Name=WP_038270283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356619.1;locus_tag=LPH58_RS05245;product=DUF1631 domain-containing protein;protein_id=WP_038270283.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1237676 1238095 . - . ID=gene-LPH58_RS05250;Name=LPH58_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05250;old_locus_tag=LPH58_05250 NZ_CP087690.1 Protein Homology CDS 1237676 1238095 . - 0 ID=cds-WP_038269965.1;Parent=gene-LPH58_RS05250;Dbxref=Genbank:WP_038269965.1;Name=WP_038269965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156959.1;locus_tag=LPH58_RS05250;product=hypothetical protein;protein_id=WP_038269965.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1238226 1238777 . + . ID=gene-LPH58_RS05255;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=LPH58_RS05255;old_locus_tag=LPH58_05255 NZ_CP087690.1 Protein Homology CDS 1238226 1238777 . + 0 ID=cds-WP_038272808.1;Parent=gene-LPH58_RS05255;Dbxref=Genbank:WP_038272808.1;Name=WP_038272808.1;Ontology_term=GO:0016226,GO:0003674;gbkey=CDS;gene=sufT;go_function=molecular_function|0003674||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488784.1;locus_tag=LPH58_RS05255;product=putative Fe-S cluster assembly protein SufT;protein_id=WP_038272808.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1238836 1239924 . + . ID=gene-LPH58_RS05260;Name=LPH58_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05260;old_locus_tag=LPH58_05260 NZ_CP087690.1 Protein Homology CDS 1238836 1239924 . + 0 ID=cds-WP_038272810.1;Parent=gene-LPH58_RS05260;Dbxref=Genbank:WP_038272810.1;Name=WP_038272810.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036086.1;locus_tag=LPH58_RS05260;product=branched-chain amino acid aminotransferase;protein_id=WP_038272810.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1240035 1240352 . - . ID=gene-LPH58_RS05265;Name=LPH58_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05265;old_locus_tag=LPH58_05265 NZ_CP087690.1 GeneMarkS-2+ CDS 1240035 1240352 . - 0 ID=cds-WP_152536663.1;Parent=gene-LPH58_RS05265;Dbxref=Genbank:WP_152536663.1;Name=WP_152536663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05265;product=hypothetical protein;protein_id=WP_152536663.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1240516 1240857 . - . ID=gene-LPH58_RS05270;Name=LPH58_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05270;old_locus_tag=LPH58_05270 NZ_CP087690.1 GeneMarkS-2+ CDS 1240516 1240857 . - 0 ID=cds-WP_038272812.1;Parent=gene-LPH58_RS05270;Dbxref=Genbank:WP_038272812.1;Name=WP_038272812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05270;product=hypothetical protein;protein_id=WP_038272812.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1241076 1241348 . - . ID=gene-LPH58_RS05275;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=LPH58_RS05275;old_locus_tag=LPH58_05275 NZ_CP087690.1 Protein Homology CDS 1241076 1241348 . - 0 ID=cds-WP_038272815.1;Parent=gene-LPH58_RS05275;Dbxref=Genbank:WP_038272815.1;Name=WP_038272815.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091159.1;locus_tag=LPH58_RS05275;product=DNA-binding transcriptional regulator Fis;protein_id=WP_038272815.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1241434 1242123 . - . ID=gene-LPH58_RS05280;Name=LPH58_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05280;old_locus_tag=LPH58_05280 NZ_CP087690.1 Protein Homology CDS 1241434 1242123 . - 0 ID=cds-WP_038272817.1;Parent=gene-LPH58_RS05280;Dbxref=Genbank:WP_038272817.1;Name=WP_038272817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085492.1;locus_tag=LPH58_RS05280;product=DUF3426 domain-containing protein;protein_id=WP_038272817.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1242175 1242549 . - . ID=gene-LPH58_RS05285;Name=LPH58_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05285;old_locus_tag=LPH58_05285 NZ_CP087690.1 Protein Homology CDS 1242175 1242549 . - 0 ID=cds-WP_038272819.1;Parent=gene-LPH58_RS05285;Dbxref=Genbank:WP_038272819.1;Name=WP_038272819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607712.1;locus_tag=LPH58_RS05285;product=helix-turn-helix transcriptional regulator;protein_id=WP_038272819.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1243059 1243325 . + . ID=gene-LPH58_RS05290;Name=LPH58_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05290;old_locus_tag=LPH58_05290 NZ_CP087690.1 GeneMarkS-2+ CDS 1243059 1243325 . + 0 ID=cds-WP_114867105.1;Parent=gene-LPH58_RS05290;Dbxref=Genbank:WP_114867105.1;Name=WP_114867105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05290;product=hypothetical protein;protein_id=WP_114867105.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1243600 1244829 . + . ID=gene-LPH58_RS05295;Name=LPH58_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05295;old_locus_tag=LPH58_05295 NZ_CP087690.1 Protein Homology CDS 1243600 1244829 . + 0 ID=cds-WP_038272822.1;Parent=gene-LPH58_RS05295;Dbxref=Genbank:WP_038272822.1;Name=WP_038272822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851076.1;locus_tag=LPH58_RS05295;product=O-antigen ligase;protein_id=WP_038272822.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1244869 1245732 . + . ID=gene-LPH58_RS05300;Name=LPH58_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05300;old_locus_tag=LPH58_05300 NZ_CP087690.1 Protein Homology CDS 1244869 1245732 . + 0 ID=cds-WP_051482381.1;Parent=gene-LPH58_RS05300;Dbxref=Genbank:WP_051482381.1;Name=WP_051482381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085488.1;locus_tag=LPH58_RS05300;product=glycosyltransferase family 2 protein;protein_id=WP_051482381.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1245729 1246763 . + . ID=gene-LPH58_RS05305;Name=LPH58_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05305;old_locus_tag=LPH58_05305 NZ_CP087690.1 Protein Homology CDS 1245729 1246763 . + 0 ID=cds-WP_038272823.1;Parent=gene-LPH58_RS05305;Dbxref=Genbank:WP_038272823.1;Name=WP_038272823.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851074.1;locus_tag=LPH58_RS05305;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WP_038272823.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1247612 1248808 . - . ID=gene-LPH58_RS05310;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LPH58_RS05310;old_locus_tag=LPH58_05310 NZ_CP087690.1 Protein Homology CDS 1247612 1248808 . - 0 ID=cds-WP_038272824.1;Parent=gene-LPH58_RS05310;Dbxref=Genbank:WP_038272824.1;Name=WP_038272824.1;gbkey=CDS;gene=ribA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851073.1;locus_tag=LPH58_RS05310;product=GTP cyclohydrolase II RibA;protein_id=WP_038272824.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1248900 1249064 . - . ID=gene-LPH58_RS05315;Name=LPH58_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05315;old_locus_tag=LPH58_05315 NZ_CP087690.1 GeneMarkS-2+ CDS 1248900 1249064 . - 0 ID=cds-WP_160165225.1;Parent=gene-LPH58_RS05315;Dbxref=Genbank:WP_160165225.1;Name=WP_160165225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05315;product=hypothetical protein;protein_id=WP_160165225.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1251489 1252040 . + . ID=gene-LPH58_RS05320;Name=LPH58_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05320;old_locus_tag=LPH58_05320 NZ_CP087690.1 Protein Homology CDS 1251489 1252040 . + 0 ID=cds-WP_038272837.1;Parent=gene-LPH58_RS05320;Dbxref=Genbank:WP_038272837.1;Name=WP_038272837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851072.1;locus_tag=LPH58_RS05320;product=TlpA disulfide reductase family protein;protein_id=WP_038272837.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1252350 1253558 . + . ID=gene-LPH58_RS05325;Name=LPH58_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05325;old_locus_tag=LPH58_05325 NZ_CP087690.1 Protein Homology CDS 1252350 1253558 . + 0 ID=cds-WP_038272829.1;Parent=gene-LPH58_RS05325;Dbxref=Genbank:WP_038272829.1;Name=WP_038272829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851071.1;locus_tag=LPH58_RS05325;product=hypothetical protein;protein_id=WP_038272829.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1254060 1254380 . - . ID=gene-LPH58_RS05330;Name=LPH58_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05330;old_locus_tag=LPH58_05330 NZ_CP087690.1 GeneMarkS-2+ CDS 1254060 1254380 . - 0 ID=cds-WP_038272832.1;Parent=gene-LPH58_RS05330;Dbxref=Genbank:WP_038272832.1;Name=WP_038272832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05330;product=hypothetical protein;protein_id=WP_038272832.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1254452 1255168 . - . ID=gene-LPH58_RS05335;Name=LPH58_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05335;old_locus_tag=LPH58_05335 NZ_CP087690.1 Protein Homology CDS 1254452 1255168 . - 0 ID=cds-WP_160165226.1;Parent=gene-LPH58_RS05335;Dbxref=Genbank:WP_160165226.1;Name=WP_160165226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027825.2;locus_tag=LPH58_RS05335;product=portal protein;protein_id=WP_160165226.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1255165 1256271 . - . ID=gene-LPH58_RS05340;Name=LPH58_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05340;old_locus_tag=LPH58_05340 NZ_CP087690.1 Protein Homology CDS 1255165 1256271 . - 0 ID=cds-WP_114867106.1;Parent=gene-LPH58_RS05340;Dbxref=Genbank:WP_114867106.1;Name=WP_114867106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016359.2;locus_tag=LPH58_RS05340;product=phage terminase large subunit;protein_id=WP_114867106.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1256268 1256669 . - . ID=gene-LPH58_RS05345;Name=LPH58_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05345;old_locus_tag=LPH58_05345 NZ_CP087690.1 Protein Homology CDS 1256268 1256669 . - 0 ID=cds-WP_114867107.1;Parent=gene-LPH58_RS05345;Dbxref=Genbank:WP_114867107.1;Name=WP_114867107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853008.1;locus_tag=LPH58_RS05345;product=lysozyme;protein_id=WP_114867107.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1256922 1257257 . - . ID=gene-LPH58_RS05350;Name=LPH58_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05350;old_locus_tag=LPH58_05350 NZ_CP087690.1 Protein Homology CDS 1256922 1257257 . - 0 ID=cds-WP_038273322.1;Parent=gene-LPH58_RS05350;Dbxref=Genbank:WP_038273322.1;Name=WP_038273322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085025.1;locus_tag=LPH58_RS05350;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_038273322.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1257254 1257508 . - . ID=gene-LPH58_RS05355;Name=LPH58_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05355;old_locus_tag=LPH58_05355 NZ_CP087690.1 Protein Homology CDS 1257254 1257508 . - 0 ID=cds-WP_038273324.1;Parent=gene-LPH58_RS05355;Dbxref=Genbank:WP_038273324.1;Name=WP_038273324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089517.1;locus_tag=LPH58_RS05355;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_038273324.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1257610 1258308 . - . ID=gene-LPH58_RS05360;Name=LPH58_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05360;old_locus_tag=LPH58_05360 NZ_CP087690.1 Protein Homology CDS 1257610 1258308 . - 0 ID=cds-WP_114867108.1;Parent=gene-LPH58_RS05360;Dbxref=Genbank:WP_114867108.1;Name=WP_114867108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852371.1;locus_tag=LPH58_RS05360;product=hypothetical protein;protein_id=WP_114867108.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1258265 1259458 . + . ID=gene-LPH58_RS05365;Name=LPH58_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05365;old_locus_tag=LPH58_05365 NZ_CP087690.1 GeneMarkS-2+ CDS 1258265 1259458 . + 0 ID=cds-WP_230428203.1;Parent=gene-LPH58_RS05365;Dbxref=Genbank:WP_230428203.1;Name=WP_230428203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05365;product=hypothetical protein;protein_id=WP_230428203.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1259462 1259734 . + . ID=gene-LPH58_RS05370;Name=LPH58_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05370;old_locus_tag=LPH58_05370 NZ_CP087690.1 Protein Homology CDS 1259462 1259734 . + 0 ID=cds-WP_114867070.1-3;Parent=gene-LPH58_RS05370;Dbxref=Genbank:WP_114867070.1;Name=WP_114867070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382732.1;locus_tag=LPH58_RS05370;product=VRR-NUC domain-containing protein;protein_id=WP_114867070.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1259736 1260086 . - . ID=gene-LPH58_RS05375;Name=LPH58_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05375;old_locus_tag=LPH58_05375 NZ_CP087690.1 Protein Homology CDS 1259736 1260086 . - 0 ID=cds-WP_114867109.1;Parent=gene-LPH58_RS05375;Dbxref=Genbank:WP_114867109.1;Name=WP_114867109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382639.1;locus_tag=LPH58_RS05375;product=DUF1640 domain-containing protein;protein_id=WP_114867109.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1260162 1261508 . + . ID=gene-LPH58_RS05380;Name=LPH58_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05380;old_locus_tag=LPH58_05380 NZ_CP087690.1 Protein Homology CDS 1260162 1261508 . + 0 ID=cds-WP_114867110.1;Parent=gene-LPH58_RS05380;Dbxref=Genbank:WP_114867110.1;Name=WP_114867110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085030.1;locus_tag=LPH58_RS05380;product=DEAD/DEAH box helicase;protein_id=WP_114867110.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1261523 1262407 . + . ID=gene-LPH58_RS05385;Name=LPH58_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05385;old_locus_tag=LPH58_05385 NZ_CP087690.1 Protein Homology CDS 1261523 1262407 . + 0 ID=cds-WP_114867111.1;Parent=gene-LPH58_RS05385;Dbxref=Genbank:WP_114867111.1;Name=WP_114867111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.2;locus_tag=LPH58_RS05385;product=hypothetical protein;protein_id=WP_114867111.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1262471 1263007 . + . ID=gene-LPH58_RS05390;Name=LPH58_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05390;old_locus_tag=LPH58_05390 NZ_CP087690.1 Protein Homology CDS 1262471 1263007 . + 0 ID=cds-WP_038273354.1-3;Parent=gene-LPH58_RS05390;Dbxref=Genbank:WP_038273354.1;Name=WP_038273354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH58_RS05390;product=pilin;protein_id=WP_038273354.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1263058 1263294 . + . ID=gene-LPH58_RS05395;Name=LPH58_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05395;old_locus_tag=LPH58_05395 NZ_CP087690.1 Protein Homology CDS 1263058 1263294 . + 0 ID=cds-WP_069636229.1-2;Parent=gene-LPH58_RS05395;Dbxref=Genbank:WP_069636229.1;Name=WP_069636229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852651.1;locus_tag=LPH58_RS05395;product=DUF4224 domain-containing protein;protein_id=WP_069636229.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1263307 1264368 . + . ID=gene-LPH58_RS05400;Name=LPH58_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05400;old_locus_tag=LPH58_05400 NZ_CP087690.1 Protein Homology CDS 1263307 1264368 . + 0 ID=cds-WP_038273275.1-2;Parent=gene-LPH58_RS05400;Dbxref=Genbank:WP_038273275.1;Name=WP_038273275.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852652.1;locus_tag=LPH58_RS05400;product=tyrosine-type recombinase/integrase;protein_id=WP_038273275.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1264635 1265399 . - . ID=gene-LPH58_RS05405;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LPH58_RS05405;old_locus_tag=LPH58_05405 NZ_CP087690.1 Protein Homology CDS 1264635 1265399 . - 0 ID=cds-WP_038272090.1;Parent=gene-LPH58_RS05405;Dbxref=Genbank:WP_038272090.1;Name=WP_038272090.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346589.1;locus_tag=LPH58_RS05405;product=hydroxyacylglutathione hydrolase;protein_id=WP_038272090.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1265444 1266058 . + . ID=gene-LPH58_RS05410;Name=LPH58_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05410;old_locus_tag=LPH58_05410 NZ_CP087690.1 Protein Homology CDS 1265444 1266058 . + 0 ID=cds-WP_230428204.1;Parent=gene-LPH58_RS05410;Dbxref=Genbank:WP_230428204.1;Name=WP_230428204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894608.1;locus_tag=LPH58_RS05410;product=class I SAM-dependent methyltransferase;protein_id=WP_230428204.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1266072 1266524 . + . ID=gene-LPH58_RS05415;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LPH58_RS05415;old_locus_tag=LPH58_05415 NZ_CP087690.1 Protein Homology CDS 1266072 1266524 . + 0 ID=cds-WP_038272094.1;Parent=gene-LPH58_RS05415;Dbxref=Genbank:WP_038272094.1;Name=WP_038272094.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088617.1;locus_tag=LPH58_RS05415;product=ribonuclease HI;protein_id=WP_038272094.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1266521 1267243 . + . ID=gene-LPH58_RS05420;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LPH58_RS05420;old_locus_tag=LPH58_05420 NZ_CP087690.1 Protein Homology CDS 1266521 1267243 . + 0 ID=cds-WP_038272095.1;Parent=gene-LPH58_RS05420;Dbxref=Genbank:WP_038272095.1;Name=WP_038272095.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894606.1;locus_tag=LPH58_RS05420;product=DNA polymerase III subunit epsilon;protein_id=WP_038272095.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1267294 1268010 . - . ID=gene-LPH58_RS05425;Name=LPH58_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05425;old_locus_tag=LPH58_05425 NZ_CP087690.1 Protein Homology CDS 1267294 1268010 . - 0 ID=cds-WP_038272160.1;Parent=gene-LPH58_RS05425;Dbxref=Genbank:WP_038272160.1;Name=WP_038272160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483822.1;locus_tag=LPH58_RS05425;product=serine/threonine-protein phosphatase;protein_id=WP_038272160.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1268133 1268223 . + . ID=gene-LPH58_RS05430;Name=LPH58_RS05430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS05430;old_locus_tag=LPH58_05430 NZ_CP087690.1 tRNAscan-SE tRNA 1268133 1268223 . + . ID=rna-LPH58_RS05430;Parent=gene-LPH58_RS05430;anticodon=(pos:1268167..1268169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05430;product=tRNA-Ser NZ_CP087690.1 tRNAscan-SE exon 1268133 1268223 . + . ID=exon-LPH58_RS05430-1;Parent=rna-LPH58_RS05430;anticodon=(pos:1268167..1268169);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05430;product=tRNA-Ser NZ_CP087690.1 RefSeq gene 1269956 1270363 . + . ID=gene-LPH58_RS05435;Name=LPH58_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05435;old_locus_tag=LPH58_05435 NZ_CP087690.1 Protein Homology CDS 1269956 1270363 . + 0 ID=cds-WP_038272096.1;Parent=gene-LPH58_RS05435;Dbxref=Genbank:WP_038272096.1;Name=WP_038272096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086118.1;locus_tag=LPH58_RS05435;product=DUF6165 family protein;protein_id=WP_038272096.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1270381 1271433 . - . ID=gene-LPH58_RS05440;Name=LPH58_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05440;old_locus_tag=LPH58_05440 NZ_CP087690.1 Protein Homology CDS 1270381 1271433 . - 0 ID=cds-WP_038272098.1;Parent=gene-LPH58_RS05440;Dbxref=Genbank:WP_038272098.1;Name=WP_038272098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088625.1;locus_tag=LPH58_RS05440;product=glycosyltransferase family 9 protein;protein_id=WP_038272098.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1271455 1272204 . + . ID=gene-LPH58_RS05445;Name=LPH58_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05445;old_locus_tag=LPH58_05445 NZ_CP087690.1 Protein Homology CDS 1271455 1272204 . + 0 ID=cds-WP_038272101.1;Parent=gene-LPH58_RS05445;Dbxref=Genbank:WP_038272101.1;Name=WP_038272101.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088627.1;locus_tag=LPH58_RS05445;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_038272101.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1272776 1274680 . + . ID=gene-LPH58_RS05450;Name=mdoH;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=LPH58_RS05450;old_locus_tag=LPH58_05450 NZ_CP087690.1 Protein Homology CDS 1272776 1274680 . + 0 ID=cds-WP_230428205.1;Parent=gene-LPH58_RS05450;Dbxref=Genbank:WP_230428205.1;Name=WP_230428205.1;gbkey=CDS;gene=mdoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084963.1;locus_tag=LPH58_RS05450;product=glucans biosynthesis glucosyltransferase MdoH;protein_id=WP_230428205.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1274713 1275384 . + . ID=gene-LPH58_RS05455;Name=LPH58_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05455;old_locus_tag=LPH58_05455 NZ_CP087690.1 Protein Homology CDS 1274713 1275384 . + 0 ID=cds-WP_038272161.1;Parent=gene-LPH58_RS05455;Dbxref=Genbank:WP_038272161.1;Name=WP_038272161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894120.1;locus_tag=LPH58_RS05455;product=alpha/beta hydrolase;protein_id=WP_038272161.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1275436 1276434 . + . ID=gene-LPH58_RS05460;Name=LPH58_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05460;old_locus_tag=LPH58_05460 NZ_CP087690.1 Protein Homology CDS 1275436 1276434 . + 0 ID=cds-WP_051482362.1;Parent=gene-LPH58_RS05460;Dbxref=Genbank:WP_051482362.1;Name=WP_051482362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903807.1;locus_tag=LPH58_RS05460;product=sensor histidine kinase;protein_id=WP_051482362.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1276450 1277208 . + . ID=gene-LPH58_RS05465;Name=LPH58_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05465;old_locus_tag=LPH58_05465 NZ_CP087690.1 Protein Homology CDS 1276450 1277208 . + 0 ID=cds-WP_038272104.1;Parent=gene-LPH58_RS05465;Dbxref=Genbank:WP_038272104.1;Name=WP_038272104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851686.1;locus_tag=LPH58_RS05465;product=LytTR family DNA-binding domain-containing protein;protein_id=WP_038272104.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1277216 1278133 . + . ID=gene-LPH58_RS05470;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LPH58_RS05470;old_locus_tag=LPH58_05470 NZ_CP087690.1 Protein Homology CDS 1277216 1278133 . + 0 ID=cds-WP_038272106.1;Parent=gene-LPH58_RS05470;Dbxref=Genbank:WP_038272106.1;Name=WP_038272106.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894123.1;locus_tag=LPH58_RS05470;product=hydroxymethylbilane synthase;protein_id=WP_038272106.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1278171 1278980 . - . ID=gene-LPH58_RS05475;Name=LPH58_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05475;old_locus_tag=LPH58_05475 NZ_CP087690.1 Protein Homology CDS 1278171 1278980 . - 0 ID=cds-WP_038272108.1;Parent=gene-LPH58_RS05475;Dbxref=Genbank:WP_038272108.1;Name=WP_038272108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302001.1;locus_tag=LPH58_RS05475;product=DUF481 domain-containing protein;protein_id=WP_038272108.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1280115 1281013 . + . ID=gene-LPH58_RS05480;Name=LPH58_RS05480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS05480;old_locus_tag=LPH58_05480;pseudo=true NZ_CP087690.1 Protein Homology CDS 1280115 1281013 . + 0 ID=cds-LPH58_RS05480;Parent=gene-LPH58_RS05480;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451607.1;locus_tag=LPH58_RS05480;product=WYL domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1281244 1282374 . - . ID=gene-LPH58_RS05485;Name=LPH58_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05485;old_locus_tag=LPH58_05485 NZ_CP087690.1 Protein Homology CDS 1281244 1282374 . - 0 ID=cds-WP_038272110.1;Parent=gene-LPH58_RS05485;Dbxref=Genbank:WP_038272110.1;Name=WP_038272110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851681.1;locus_tag=LPH58_RS05485;product=PilT/PilU family type 4a pilus ATPase;protein_id=WP_038272110.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1282532 1283566 . - . ID=gene-LPH58_RS05490;Name=LPH58_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05490;old_locus_tag=LPH58_05490 NZ_CP087690.1 Protein Homology CDS 1282532 1283566 . - 0 ID=cds-WP_038272165.1;Parent=gene-LPH58_RS05490;Dbxref=Genbank:WP_038272165.1;Name=WP_038272165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003084552.1;locus_tag=LPH58_RS05490;product=type IV pilus twitching motility protein PilT;protein_id=WP_038272165.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1285171 1286022 . + . ID=gene-LPH58_RS05495;Name=LPH58_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05495;old_locus_tag=LPH58_05495 NZ_CP087690.1 Protein Homology CDS 1285171 1286022 . + 0 ID=cds-WP_081755470.1;Parent=gene-LPH58_RS05495;Dbxref=Genbank:WP_081755470.1;Name=WP_081755470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356673.1;locus_tag=LPH58_RS05495;product=glycosyltransferase family 2 protein;protein_id=WP_081755470.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1286193 1287446 . + . ID=gene-LPH58_RS05500;Name=LPH58_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05500;old_locus_tag=LPH58_05500 NZ_CP087690.1 Protein Homology CDS 1286193 1287446 . + 0 ID=cds-WP_038272115.1;Parent=gene-LPH58_RS05500;Dbxref=Genbank:WP_038272115.1;Name=WP_038272115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009606734.1;locus_tag=LPH58_RS05500;product=flavohemoglobin expression-modulating QEGLA motif protein;protein_id=WP_038272115.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1287778 1288578 . - . ID=gene-LPH58_RS05505;Name=LPH58_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05505;old_locus_tag=LPH58_05505 NZ_CP087690.1 Protein Homology CDS 1287778 1288578 . - 0 ID=cds-WP_038272117.1;Parent=gene-LPH58_RS05505;Dbxref=Genbank:WP_038272117.1;Name=WP_038272117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571170.1;locus_tag=LPH58_RS05505;product=glycosyltransferase family 2 protein;protein_id=WP_038272117.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1288575 1289348 . - . ID=gene-LPH58_RS05510;Name=LPH58_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05510;old_locus_tag=LPH58_05510 NZ_CP087690.1 Protein Homology CDS 1288575 1289348 . - 0 ID=cds-WP_171898080.1;Parent=gene-LPH58_RS05510;Dbxref=Genbank:WP_171898080.1;Name=WP_171898080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302406.1;locus_tag=LPH58_RS05510;product=beta-ketoacyl synthase chain length factor;protein_id=WP_171898080.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1289351 1290577 . - . ID=gene-LPH58_RS05515;Name=LPH58_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05515;old_locus_tag=LPH58_05515 NZ_CP087690.1 Protein Homology CDS 1289351 1290577 . - 0 ID=cds-WP_230428207.1;Parent=gene-LPH58_RS05515;Dbxref=Genbank:WP_230428207.1;Name=WP_230428207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337879.1;locus_tag=LPH58_RS05515;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_230428207.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1290841 1290990 . + . ID=gene-LPH58_RS05520;Name=LPH58_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05520;old_locus_tag=LPH58_05520 NZ_CP087690.1 GeneMarkS-2+ CDS 1290841 1290990 . + 0 ID=cds-WP_160165206.1;Parent=gene-LPH58_RS05520;Dbxref=Genbank:WP_160165206.1;Name=WP_160165206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05520;product=hypothetical protein;protein_id=WP_160165206.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1290983 1294300 . + . ID=gene-LPH58_RS05525;Name=LPH58_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05525;old_locus_tag=LPH58_05525 NZ_CP087690.1 Protein Homology CDS 1290983 1294300 . + 0 ID=cds-WP_038272125.1;Parent=gene-LPH58_RS05525;Dbxref=Genbank:WP_038272125.1;Name=WP_038272125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087287.1;locus_tag=LPH58_RS05525;product=ankyrin repeat domain-containing protein;protein_id=WP_038272125.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1295406 1297994 . - . ID=gene-LPH58_RS05530;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=LPH58_RS05530;old_locus_tag=LPH58_05530 NZ_CP087690.1 Protein Homology CDS 1295406 1297994 . - 0 ID=cds-WP_038272132.1;Parent=gene-LPH58_RS05530;Dbxref=Genbank:WP_038272132.1;Name=WP_038272132.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084924.1;locus_tag=LPH58_RS05530;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_038272132.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1298617 1298961 . + . ID=gene-LPH58_RS05535;Name=LPH58_RS05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05535;old_locus_tag=LPH58_05535 NZ_CP087690.1 Protein Homology CDS 1298617 1298961 . + 0 ID=cds-WP_038272135.1;Parent=gene-LPH58_RS05535;Dbxref=Genbank:WP_038272135.1;Name=WP_038272135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084923.1;locus_tag=LPH58_RS05535;product=RidA family protein;protein_id=WP_038272135.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1299346 1299422 . + . ID=gene-LPH58_RS05540;Name=LPH58_RS05540;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS05540;old_locus_tag=LPH58_05540 NZ_CP087690.1 tRNAscan-SE tRNA 1299346 1299422 . + . ID=rna-LPH58_RS05540;Parent=gene-LPH58_RS05540;anticodon=(pos:1299380..1299382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05540;product=tRNA-Arg NZ_CP087690.1 tRNAscan-SE exon 1299346 1299422 . + . ID=exon-LPH58_RS05540-1;Parent=rna-LPH58_RS05540;anticodon=(pos:1299380..1299382);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05540;product=tRNA-Arg NZ_CP087690.1 RefSeq gene 1299612 1300439 . - . ID=gene-LPH58_RS05545;Name=LPH58_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05545;old_locus_tag=LPH58_05545 NZ_CP087690.1 Protein Homology CDS 1299612 1300439 . - 0 ID=cds-WP_038272169.1;Parent=gene-LPH58_RS05545;Dbxref=Genbank:WP_038272169.1;Name=WP_038272169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572079.1;locus_tag=LPH58_RS05545;product=hypothetical protein;protein_id=WP_038272169.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1300585 1301487 . - . ID=gene-LPH58_RS05550;Name=LPH58_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05550;old_locus_tag=LPH58_05550 NZ_CP087690.1 Protein Homology CDS 1300585 1301487 . - 0 ID=cds-WP_051482360.1;Parent=gene-LPH58_RS05550;Dbxref=Genbank:WP_051482360.1;Name=WP_051482360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852738.1;locus_tag=LPH58_RS05550;product=Hsp33 family molecular chaperone HslO;protein_id=WP_051482360.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1301563 1302294 . + . ID=gene-LPH58_RS05555;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LPH58_RS05555;old_locus_tag=LPH58_05555 NZ_CP087690.1 Protein Homology CDS 1301563 1302294 . + 0 ID=cds-WP_230428283.1;Parent=gene-LPH58_RS05555;Dbxref=Genbank:WP_230428283.1;Name=WP_230428283.1;Ontology_term=GO:0009252,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382616.1;locus_tag=LPH58_RS05555;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_230428283.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1303141 1305747 . + . ID=gene-LPH58_RS05560;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LPH58_RS05560;old_locus_tag=LPH58_05560 NZ_CP087690.1 Protein Homology CDS 1303141 1305747 . + 0 ID=cds-WP_162814115.1;Parent=gene-LPH58_RS05560;Dbxref=Genbank:WP_162814115.1;Name=WP_162814115.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031336652.1;locus_tag=LPH58_RS05560;product=DNA mismatch repair protein MutS;protein_id=WP_162814115.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1305794 1306600 . - . ID=gene-LPH58_RS05565;Name=LPH58_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05565;old_locus_tag=LPH58_05565 NZ_CP087690.1 Protein Homology CDS 1305794 1306600 . - 0 ID=cds-WP_038272139.1;Parent=gene-LPH58_RS05565;Dbxref=Genbank:WP_038272139.1;Name=WP_038272139.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852741.1;locus_tag=LPH58_RS05565;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_038272139.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1307005 1307080 . + . ID=gene-LPH58_RS05570;Name=LPH58_RS05570;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS05570;old_locus_tag=LPH58_05570 NZ_CP087690.1 tRNAscan-SE tRNA 1307005 1307080 . + . ID=rna-LPH58_RS05570;Parent=gene-LPH58_RS05570;anticodon=(pos:1307038..1307040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05570;product=tRNA-Gly NZ_CP087690.1 tRNAscan-SE exon 1307005 1307080 . + . ID=exon-LPH58_RS05570-1;Parent=rna-LPH58_RS05570;anticodon=(pos:1307038..1307040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05570;product=tRNA-Gly NZ_CP087690.1 RefSeq gene 1307226 1307555 . + . ID=gene-LPH58_RS05575;Name=LPH58_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05575;old_locus_tag=LPH58_05575 NZ_CP087690.1 GeneMarkS-2+ CDS 1307226 1307555 . + 0 ID=cds-WP_152536648.1;Parent=gene-LPH58_RS05575;Dbxref=Genbank:WP_152536648.1;Name=WP_152536648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05575;product=hypothetical protein;protein_id=WP_152536648.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1308261 1309214 . + . ID=gene-LPH58_RS05580;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=LPH58_RS05580;old_locus_tag=LPH58_05580 NZ_CP087690.1 Protein Homology CDS 1308261 1309214 . + 0 ID=cds-WP_038272140.1;Parent=gene-LPH58_RS05580;Dbxref=Genbank:WP_038272140.1;Name=WP_038272140.1;Ontology_term=GO:0006355,GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011257360.1;locus_tag=LPH58_RS05580;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_038272140.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1309211 1309936 . + . ID=gene-LPH58_RS05585;Name=LPH58_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05585;old_locus_tag=LPH58_05585 NZ_CP087690.1 Protein Homology CDS 1309211 1309936 . + 0 ID=cds-WP_038272143.1;Parent=gene-LPH58_RS05585;Dbxref=Genbank:WP_038272143.1;Name=WP_038272143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894264.1;locus_tag=LPH58_RS05585;product=type III pantothenate kinase;protein_id=WP_038272143.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1309947 1310573 . + . ID=gene-LPH58_RS05590;Name=LPH58_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05590;old_locus_tag=LPH58_05590 NZ_CP087690.1 Protein Homology CDS 1309947 1310573 . + 0 ID=cds-WP_038272144.1;Parent=gene-LPH58_RS05590;Dbxref=Genbank:WP_038272144.1;Name=WP_038272144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089397.1;locus_tag=LPH58_RS05590;product=SPOR domain-containing protein;protein_id=WP_038272144.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1310731 1310806 . + . ID=gene-LPH58_RS05595;Name=LPH58_RS05595;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS05595;old_locus_tag=LPH58_05595 NZ_CP087690.1 tRNAscan-SE tRNA 1310731 1310806 . + . ID=rna-LPH58_RS05595;Parent=gene-LPH58_RS05595;anticodon=(pos:1310764..1310766);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05595;product=tRNA-Thr NZ_CP087690.1 tRNAscan-SE exon 1310731 1310806 . + . ID=exon-LPH58_RS05595-1;Parent=rna-LPH58_RS05595;anticodon=(pos:1310764..1310766);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05595;product=tRNA-Thr NZ_CP087690.1 RefSeq gene 1311838 1312137 . + . ID=gene-LPH58_RS05600;Name=LPH58_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05600;old_locus_tag=LPH58_05600 NZ_CP087690.1 GeneMarkS-2+ CDS 1311838 1312137 . + 0 ID=cds-WP_038272145.1;Parent=gene-LPH58_RS05600;Dbxref=Genbank:WP_038272145.1;Name=WP_038272145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05600;product=hypothetical protein;protein_id=WP_038272145.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1312264 1312506 . + . ID=gene-LPH58_RS05605;Name=LPH58_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05605;old_locus_tag=LPH58_05605 NZ_CP087690.1 Protein Homology CDS 1312264 1312506 . + 0 ID=cds-WP_160165207.1;Parent=gene-LPH58_RS05605;Dbxref=Genbank:WP_160165207.1;Name=WP_160165207.1;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016991.2;locus_tag=LPH58_RS05605;product=phage portal protein;protein_id=WP_160165207.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1312577 1313047 . + . ID=gene-LPH58_RS05610;Name=LPH58_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05610;old_locus_tag=LPH58_05610 NZ_CP087690.1 Protein Homology CDS 1312577 1313047 . + 0 ID=cds-WP_114867113.1;Parent=gene-LPH58_RS05610;Dbxref=Genbank:WP_114867113.1;Name=WP_114867113.1;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: protein motif:HMM:NF016991.2;locus_tag=LPH58_RS05610;product=phage portal protein;protein_id=WP_114867113.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1313274 1313891 . + . ID=gene-LPH58_RS05615;Name=LPH58_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05615;old_locus_tag=LPH58_05615 NZ_CP087690.1 Protein Homology CDS 1313274 1313891 . + 0 ID=cds-WP_038272147.1;Parent=gene-LPH58_RS05615;Dbxref=Genbank:WP_038272147.1;Name=WP_038272147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894838.1;locus_tag=LPH58_RS05615;product=glycoside hydrolase family 25 protein;protein_id=WP_038272147.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1314676 1314781 . + . ID=gene-LPH58_RS05620;Name=LPH58_RS05620;end_range=1314781,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS05620;old_locus_tag=LPH58_05620;partial=true;pseudo=true;start_range=.,1314676 NZ_CP087690.1 Protein Homology CDS 1314676 1314781 . + 0 ID=cds-LPH58_RS05620;Parent=gene-LPH58_RS05620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1314781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097944.1;locus_tag=LPH58_RS05620;partial=true;product=BRO family protein;pseudo=true;start_range=.,1314676;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1314848 1315030 . + . ID=gene-LPH58_RS05625;Name=LPH58_RS05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS05625;old_locus_tag=LPH58_05625;partial=true;pseudo=true;start_range=.,1314848 NZ_CP087690.1 Protein Homology CDS 1314848 1315030 . + 0 ID=cds-LPH58_RS05625;Parent=gene-LPH58_RS05625;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852371.1;locus_tag=LPH58_RS05625;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1314848;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1315152 1315449 . + . ID=gene-LPH58_RS05630;Name=LPH58_RS05630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS05630;old_locus_tag=LPH58_05630;pseudo=true NZ_CP087690.1 Protein Homology CDS 1315152 1315449 . + 0 ID=cds-LPH58_RS05630;Parent=gene-LPH58_RS05630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894094.1;locus_tag=LPH58_RS05630;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1315446 1315745 . + . ID=gene-LPH58_RS05635;Name=LPH58_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05635;old_locus_tag=LPH58_05635 NZ_CP087690.1 Protein Homology CDS 1315446 1315745 . + 0 ID=cds-WP_171898051.1;Parent=gene-LPH58_RS05635;Dbxref=Genbank:WP_171898051.1;Name=WP_171898051.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009580422.1;locus_tag=LPH58_RS05635;product=putative addiction module antidote protein;protein_id=WP_171898051.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1315855 1316058 . + . ID=gene-LPH58_RS05640;Name=LPH58_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05640;old_locus_tag=LPH58_05640 NZ_CP087690.1 GeneMarkS-2+ CDS 1315855 1316058 . + 0 ID=cds-WP_230433939.1;Parent=gene-LPH58_RS05640;Dbxref=Genbank:WP_230433939.1;Name=WP_230433939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05640;product=hypothetical protein;protein_id=WP_230433939.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1316061 1316429 . + . ID=gene-LPH58_RS05645;Name=LPH58_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05645;old_locus_tag=LPH58_05645 NZ_CP087690.1 Protein Homology CDS 1316061 1316429 . + 0 ID=cds-WP_038272150.1;Parent=gene-LPH58_RS05645;Dbxref=Genbank:WP_038272150.1;Name=WP_038272150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085010.1;locus_tag=LPH58_RS05645;product=DUF4054 domain-containing protein;protein_id=WP_038272150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1316477 1317043 . - . ID=gene-LPH58_RS05650;Name=LPH58_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05650;old_locus_tag=LPH58_05650 NZ_CP087690.1 Protein Homology CDS 1316477 1317043 . - 0 ID=cds-WP_038272151.1;Parent=gene-LPH58_RS05650;Dbxref=Genbank:WP_038272151.1;Name=WP_038272151.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084910.1;locus_tag=LPH58_RS05650;product=pilin;protein_id=WP_038272151.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1317247 1317576 . + . ID=gene-LPH58_RS05655;Name=LPH58_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05655;old_locus_tag=LPH58_05655 NZ_CP087690.1 GeneMarkS-2+ CDS 1317247 1317576 . + 0 ID=cds-WP_230430829.1;Parent=gene-LPH58_RS05655;Dbxref=Genbank:WP_230430829.1;Name=WP_230430829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05655;product=hypothetical protein;protein_id=WP_230430829.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1317585 1317977 . + . ID=gene-LPH58_RS05660;Name=LPH58_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05660;old_locus_tag=LPH58_05660 NZ_CP087690.1 Protein Homology CDS 1317585 1317977 . + 0 ID=cds-WP_069636218.1;Parent=gene-LPH58_RS05660;Dbxref=Genbank:WP_069636218.1;Name=WP_069636218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090296.1;locus_tag=LPH58_RS05660;product=hypothetical protein;protein_id=WP_069636218.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1317907 1318716 . + . ID=gene-LPH58_RS05665;Name=LPH58_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05665;old_locus_tag=LPH58_05665 NZ_CP087690.1 GeneMarkS-2+ CDS 1317907 1318716 . + 0 ID=cds-WP_200866208.1;Parent=gene-LPH58_RS05665;Dbxref=Genbank:WP_200866208.1;Name=WP_200866208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05665;product=VWA domain-containing protein;protein_id=WP_200866208.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1318709 1319221 . + . ID=gene-LPH58_RS05670;Name=LPH58_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05670;old_locus_tag=LPH58_05670 NZ_CP087690.1 Protein Homology CDS 1318709 1319221 . + 0 ID=cds-WP_038272154.1;Parent=gene-LPH58_RS05670;Dbxref=Genbank:WP_038272154.1;Name=WP_038272154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894567.1;locus_tag=LPH58_RS05670;product=hypothetical protein;protein_id=WP_038272154.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1319224 1319643 . + . ID=gene-LPH58_RS05675;Name=LPH58_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05675;old_locus_tag=LPH58_05675 NZ_CP087690.1 Protein Homology CDS 1319224 1319643 . + 0 ID=cds-WP_038272155.1;Parent=gene-LPH58_RS05675;Dbxref=Genbank:WP_038272155.1;Name=WP_038272155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083636.1;locus_tag=LPH58_RS05675;product=hypothetical protein;protein_id=WP_038272155.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1319995 1320390 . - . ID=gene-LPH58_RS05680;Name=LPH58_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05680;old_locus_tag=LPH58_05680 NZ_CP087690.1 Protein Homology CDS 1319995 1320390 . - 0 ID=cds-WP_038272158.1;Parent=gene-LPH58_RS05680;Dbxref=Genbank:WP_038272158.1;Name=WP_038272158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=LPH58_RS05680;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_038272158.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1320387 1320653 . - . ID=gene-LPH58_RS05685;Name=LPH58_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05685;old_locus_tag=LPH58_05685 NZ_CP087690.1 Protein Homology CDS 1320387 1320653 . - 0 ID=cds-WP_038272159.1;Parent=gene-LPH58_RS05685;Dbxref=Genbank:WP_038272159.1;Name=WP_038272159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852902.1;locus_tag=LPH58_RS05685;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038272159.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1320771 1321211 . - . ID=gene-LPH58_RS05690;Name=LPH58_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05690;old_locus_tag=LPH58_05690 NZ_CP087690.1 Protein Homology CDS 1320771 1321211 . - 0 ID=cds-WP_069636219.1;Parent=gene-LPH58_RS05690;Dbxref=Genbank:WP_069636219.1;Name=WP_069636219.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LPH58_RS05690;product=DUF3693 domain-containing protein;protein_id=WP_069636219.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1321356 1321616 . + . ID=gene-LPH58_RS05695;Name=LPH58_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05695;old_locus_tag=LPH58_05695 NZ_CP087690.1 GeneMarkS-2+ CDS 1321356 1321616 . + 0 ID=cds-WP_152536649.1;Parent=gene-LPH58_RS05695;Dbxref=Genbank:WP_152536649.1;Name=WP_152536649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05695;product=hypothetical protein;protein_id=WP_152536649.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1321647 1321829 . + . ID=gene-LPH58_RS05700;Name=LPH58_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05700;old_locus_tag=LPH58_05700 NZ_CP087690.1 Protein Homology CDS 1321647 1321829 . + 0 ID=cds-WP_114867114.1;Parent=gene-LPH58_RS05700;Dbxref=Genbank:WP_114867114.1;Name=WP_114867114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH58_RS05700;product=hypothetical protein;protein_id=WP_114867114.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1322260 1323408 . + . ID=gene-LPH58_RS05705;Name=LPH58_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05705;old_locus_tag=LPH58_05705 NZ_CP087690.1 Protein Homology CDS 1322260 1323408 . + 0 ID=cds-WP_038273097.1;Parent=gene-LPH58_RS05705;Dbxref=Genbank:WP_038273097.1;Name=WP_038273097.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853102.1;locus_tag=LPH58_RS05705;product=replication initiation factor domain-containing protein;protein_id=WP_038273097.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1323454 1323747 . + . ID=gene-LPH58_RS05710;Name=LPH58_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05710;old_locus_tag=LPH58_05710 NZ_CP087690.1 Protein Homology CDS 1323454 1323747 . + 0 ID=cds-WP_038273093.1;Parent=gene-LPH58_RS05710;Dbxref=Genbank:WP_038273093.1;Name=WP_038273093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097860.1;locus_tag=LPH58_RS05710;product=single-stranded DNA-binding protein;protein_id=WP_038273093.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1323747 1323956 . + . ID=gene-LPH58_RS05715;Name=LPH58_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05715;old_locus_tag=LPH58_05715 NZ_CP087690.1 Protein Homology CDS 1323747 1323956 . + 0 ID=cds-WP_230428208.1;Parent=gene-LPH58_RS05715;Dbxref=Genbank:WP_230428208.1;Name=WP_230428208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH58_RS05715;product=hypothetical protein;protein_id=WP_230428208.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1323965 1324183 . + . ID=gene-LPH58_RS05720;Name=LPH58_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05720;old_locus_tag=LPH58_05720 NZ_CP087690.1 Protein Homology CDS 1323965 1324183 . + 0 ID=cds-WP_051482398.1;Parent=gene-LPH58_RS05720;Dbxref=Genbank:WP_051482398.1;Name=WP_051482398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017194.2;locus_tag=LPH58_RS05720;product=major capsid protein;protein_id=WP_051482398.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1324651 1325718 . + . ID=gene-LPH58_RS05725;Name=LPH58_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05725;old_locus_tag=LPH58_05725 NZ_CP087690.1 Protein Homology CDS 1324651 1325718 . + 0 ID=cds-WP_152536670.1;Parent=gene-LPH58_RS05725;Dbxref=Genbank:WP_152536670.1;Name=WP_152536670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041109.1;locus_tag=LPH58_RS05725;product=virulence factor TspB C-terminal domain-related protein;protein_id=WP_152536670.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1325722 1326063 . + . ID=gene-LPH58_RS05730;Name=LPH58_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05730;old_locus_tag=LPH58_05730 NZ_CP087690.1 Protein Homology CDS 1325722 1326063 . + 0 ID=cds-WP_038273089.1;Parent=gene-LPH58_RS05730;Dbxref=Genbank:WP_038273089.1;Name=WP_038273089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH58_RS05730;product=DUF2523 family protein;protein_id=WP_038273089.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1326063 1327211 . + . ID=gene-LPH58_RS05735;Name=LPH58_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05735;old_locus_tag=LPH58_05735 NZ_CP087690.1 Protein Homology CDS 1326063 1327211 . + 0 ID=cds-WP_069636227.1;Parent=gene-LPH58_RS05735;Dbxref=Genbank:WP_069636227.1;Name=WP_069636227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH58_RS05735;product=hypothetical protein;protein_id=WP_069636227.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1327216 1327572 . - . ID=gene-LPH58_RS05740;Name=LPH58_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05740;old_locus_tag=LPH58_05740 NZ_CP087690.1 Protein Homology CDS 1327216 1327572 . - 0 ID=cds-WP_200866198.1;Parent=gene-LPH58_RS05740;Dbxref=Genbank:WP_200866198.1;Name=WP_200866198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051576.1;locus_tag=LPH58_RS05740;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_200866198.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1327515 1327787 . - . ID=gene-LPH58_RS05745;Name=LPH58_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05745;old_locus_tag=LPH58_05745 NZ_CP087690.1 Protein Homology CDS 1327515 1327787 . - 0 ID=cds-WP_038271292.1;Parent=gene-LPH58_RS05745;Dbxref=Genbank:WP_038271292.1;Name=WP_038271292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004371118.1;locus_tag=LPH58_RS05745;product=CopG family ribbon-helix-helix protein;protein_id=WP_038271292.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1328129 1329001 . + . ID=gene-LPH58_RS05750;Name=LPH58_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05750;old_locus_tag=LPH58_05750 NZ_CP087690.1 Protein Homology CDS 1328129 1329001 . + 0 ID=cds-WP_051482318.1;Parent=gene-LPH58_RS05750;Dbxref=Genbank:WP_051482318.1;Name=WP_051482318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087203.1;locus_tag=LPH58_RS05750;product=site-specific integrase;protein_id=WP_051482318.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1329014 1329406 . - . ID=gene-LPH58_RS05755;Name=LPH58_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05755;old_locus_tag=LPH58_05755 NZ_CP087690.1 GeneMarkS-2+ CDS 1329014 1329406 . - 0 ID=cds-WP_051482319.1;Parent=gene-LPH58_RS05755;Dbxref=Genbank:WP_051482319.1;Name=WP_051482319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05755;product=hypothetical protein;protein_id=WP_051482319.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1329593 1329751 . - . ID=gene-LPH58_RS05760;Name=LPH58_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05760;old_locus_tag=LPH58_05760 NZ_CP087690.1 GeneMarkS-2+ CDS 1329593 1329751 . - 0 ID=cds-WP_160165178.1;Parent=gene-LPH58_RS05760;Dbxref=Genbank:WP_160165178.1;Name=WP_160165178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05760;product=hypothetical protein;protein_id=WP_160165178.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1329748 1330326 . - . ID=gene-LPH58_RS05765;Name=LPH58_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05765;old_locus_tag=LPH58_05765 NZ_CP087690.1 Protein Homology CDS 1329748 1330326 . - 0 ID=cds-WP_081755441.1;Parent=gene-LPH58_RS05765;Dbxref=Genbank:WP_081755441.1;Name=WP_081755441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086808.1;locus_tag=LPH58_RS05765;product=lysozyme;protein_id=WP_081755441.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1330342 1330554 . - . ID=gene-LPH58_RS05770;Name=LPH58_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05770;old_locus_tag=LPH58_05770 NZ_CP087690.1 Protein Homology CDS 1330342 1330554 . - 0 ID=cds-WP_038271294.1;Parent=gene-LPH58_RS05770;Dbxref=Genbank:WP_038271294.1;Name=WP_038271294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086826.1;locus_tag=LPH58_RS05770;product=hypothetical protein;protein_id=WP_038271294.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1330632 1331006 . - . ID=gene-LPH58_RS05775;Name=LPH58_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05775;old_locus_tag=LPH58_05775 NZ_CP087690.1 Protein Homology CDS 1330632 1331006 . - 0 ID=cds-WP_038271295.1;Parent=gene-LPH58_RS05775;Dbxref=Genbank:WP_038271295.1;Name=WP_038271295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893040.1;locus_tag=LPH58_RS05775;product=DUF2190 family protein;protein_id=WP_038271295.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1331069 1333324 . - . ID=gene-LPH58_RS05780;Name=LPH58_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05780;old_locus_tag=LPH58_05780 NZ_CP087690.1 Protein Homology CDS 1331069 1333324 . - 0 ID=cds-WP_081755442.1;Parent=gene-LPH58_RS05780;Dbxref=Genbank:WP_081755442.1;Name=WP_081755442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851147.1;locus_tag=LPH58_RS05780;product=Clp protease ClpP;protein_id=WP_081755442.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1333321 1334880 . - . ID=gene-LPH58_RS05785;Name=LPH58_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05785;old_locus_tag=LPH58_05785 NZ_CP087690.1 Protein Homology CDS 1333321 1334880 . - 0 ID=cds-WP_038271296.1;Parent=gene-LPH58_RS05785;Dbxref=Genbank:WP_038271296.1;Name=WP_038271296.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086805.1;locus_tag=LPH58_RS05785;product=phage portal protein;protein_id=WP_038271296.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1334877 1335092 . - . ID=gene-LPH58_RS05790;Name=LPH58_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05790;old_locus_tag=LPH58_05790 NZ_CP087690.1 Protein Homology CDS 1334877 1335092 . - 0 ID=cds-WP_038271297.1;Parent=gene-LPH58_RS05790;Dbxref=Genbank:WP_038271297.1;Name=WP_038271297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337727.1;locus_tag=LPH58_RS05790;product=hypothetical protein;protein_id=WP_038271297.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1335287 1335613 . + . ID=gene-LPH58_RS05795;Name=LPH58_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05795;old_locus_tag=LPH58_05795 NZ_CP087690.1 Protein Homology CDS 1335287 1335613 . + 0 ID=cds-WP_038271298.1;Parent=gene-LPH58_RS05795;Dbxref=Genbank:WP_038271298.1;Name=WP_038271298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798663.1;locus_tag=LPH58_RS05795;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038271298.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1335707 1336021 . + . ID=gene-LPH58_RS05800;Name=LPH58_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05800;old_locus_tag=LPH58_05800 NZ_CP087690.1 Protein Homology CDS 1335707 1336021 . + 0 ID=cds-WP_038271299.1;Parent=gene-LPH58_RS05800;Dbxref=Genbank:WP_038271299.1;Name=WP_038271299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004167230.1;locus_tag=LPH58_RS05800;product=addiction module antidote protein;protein_id=WP_038271299.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1336164 1336442 . - . ID=gene-LPH58_RS05805;Name=LPH58_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05805;old_locus_tag=LPH58_05805 NZ_CP087690.1 Protein Homology CDS 1336164 1336442 . - 0 ID=cds-WP_038271300.1;Parent=gene-LPH58_RS05805;Dbxref=Genbank:WP_038271300.1;Name=WP_038271300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011342941.1;locus_tag=LPH58_RS05805;product=hypothetical protein;protein_id=WP_038271300.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1337119 1337370 . + . ID=gene-LPH58_RS05810;Name=LPH58_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05810;old_locus_tag=LPH58_05810 NZ_CP087690.1 Protein Homology CDS 1337119 1337370 . + 0 ID=cds-WP_038271367.1;Parent=gene-LPH58_RS05810;Dbxref=Genbank:WP_038271367.1;Name=WP_038271367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1;locus_tag=LPH58_RS05810;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038271367.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1337367 1337765 . + . ID=gene-LPH58_RS05815;Name=LPH58_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05815;old_locus_tag=LPH58_05815 NZ_CP087690.1 Protein Homology CDS 1337367 1337765 . + 0 ID=cds-WP_038271302.1;Parent=gene-LPH58_RS05815;Dbxref=Genbank:WP_038271302.1;Name=WP_038271302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1;locus_tag=LPH58_RS05815;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_038271302.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1339457 1339762 . - . ID=gene-LPH58_RS05820;Name=LPH58_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05820;old_locus_tag=LPH58_05820 NZ_CP087690.1 Protein Homology CDS 1339457 1339762 . - 0 ID=cds-WP_051482325.1;Parent=gene-LPH58_RS05820;Dbxref=Genbank:WP_051482325.1;Name=WP_051482325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997832.1;locus_tag=LPH58_RS05820;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_051482325.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1339792 1340154 . - . ID=gene-LPH58_RS05825;Name=LPH58_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05825;old_locus_tag=LPH58_05825 NZ_CP087690.1 Protein Homology CDS 1339792 1340154 . - 0 ID=cds-WP_051482320.1;Parent=gene-LPH58_RS05825;Dbxref=Genbank:WP_051482320.1;Name=WP_051482320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009579511.1;locus_tag=LPH58_RS05825;product=rhodanese-like domain-containing protein;protein_id=WP_051482320.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1340287 1342002 . + . ID=gene-LPH58_RS05830;Name=LPH58_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05830;old_locus_tag=LPH58_05830 NZ_CP087690.1 Protein Homology CDS 1340287 1342002 . + 0 ID=cds-WP_051482321.1;Parent=gene-LPH58_RS05830;Dbxref=Genbank:WP_051482321.1;Name=WP_051482321.1;Ontology_term=GO:0006810,GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01730.1;locus_tag=LPH58_RS05830;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_051482321.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1341995 1345258 . + . ID=gene-LPH58_RS05835;Name=LPH58_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05835;old_locus_tag=LPH58_05835 NZ_CP087690.1 Protein Homology CDS 1341995 1345258 . + 0 ID=cds-WP_038271305.1;Parent=gene-LPH58_RS05835;Dbxref=Genbank:WP_038271305.1;Name=WP_038271305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917373.1;locus_tag=LPH58_RS05835;product=efflux RND transporter permease subunit;protein_id=WP_038271305.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1345539 1346708 . - . ID=gene-LPH58_RS05840;Name=LPH58_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05840;old_locus_tag=LPH58_05840 NZ_CP087690.1 Protein Homology CDS 1345539 1346708 . - 0 ID=cds-WP_038271306.1;Parent=gene-LPH58_RS05840;Dbxref=Genbank:WP_038271306.1;Name=WP_038271306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089406.1;locus_tag=LPH58_RS05840;product=porphyrin biosynthesis protein;protein_id=WP_038271306.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1346705 1347685 . - . ID=gene-LPH58_RS05845;Name=LPH58_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05845;old_locus_tag=LPH58_05845 NZ_CP087690.1 Protein Homology CDS 1346705 1347685 . - 0 ID=cds-WP_038271307.1;Parent=gene-LPH58_RS05845;Dbxref=Genbank:WP_038271307.1;Name=WP_038271307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488502.1;locus_tag=LPH58_RS05845;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_038271307.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1347733 1348506 . - . ID=gene-LPH58_RS05850;Name=LPH58_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05850;old_locus_tag=LPH58_05850 NZ_CP087690.1 Protein Homology CDS 1347733 1348506 . - 0 ID=cds-WP_038271371.1;Parent=gene-LPH58_RS05850;Dbxref=Genbank:WP_038271371.1;Name=WP_038271371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370608.1;locus_tag=LPH58_RS05850;product=uroporphyrinogen-III synthase;protein_id=WP_038271371.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1348650 1349087 . + . ID=gene-LPH58_RS05855;Name=LPH58_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05855;old_locus_tag=LPH58_05855 NZ_CP087690.1 Protein Homology CDS 1348650 1349087 . + 0 ID=cds-WP_038271308.1;Parent=gene-LPH58_RS05855;Dbxref=Genbank:WP_038271308.1;Name=WP_038271308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089413.1;locus_tag=LPH58_RS05855;product=hypothetical protein;protein_id=WP_038271308.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1349164 1349601 . + . ID=gene-LPH58_RS05860;Name=LPH58_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05860;old_locus_tag=LPH58_05860 NZ_CP087690.1 Protein Homology CDS 1349164 1349601 . + 0 ID=cds-WP_038271309.1;Parent=gene-LPH58_RS05860;Dbxref=Genbank:WP_038271309.1;Name=WP_038271309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084894.1;locus_tag=LPH58_RS05860;product=rhodanese-like domain-containing protein;protein_id=WP_038271309.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1349718 1350236 . + . ID=gene-LPH58_RS05865;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LPH58_RS05865;old_locus_tag=LPH58_05865 NZ_CP087690.1 Protein Homology CDS 1349718 1350236 . + 0 ID=cds-WP_038271310.1;Parent=gene-LPH58_RS05865;Dbxref=Genbank:WP_038271310.1;Name=WP_038271310.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894270.1;locus_tag=LPH58_RS05865;product=protein-export chaperone SecB;protein_id=WP_038271310.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1350258 1351307 . + . ID=gene-LPH58_RS05870;Name=LPH58_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05870;old_locus_tag=LPH58_05870 NZ_CP087690.1 Protein Homology CDS 1350258 1351307 . + 0 ID=cds-WP_038271311.1;Parent=gene-LPH58_RS05870;Dbxref=Genbank:WP_038271311.1;Name=WP_038271311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572788.1;locus_tag=LPH58_RS05870;product=NAD(P)-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_038271311.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1351458 1352030 . - . ID=gene-LPH58_RS05875;Name=LPH58_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05875;old_locus_tag=LPH58_05875 NZ_CP087690.1 Protein Homology CDS 1351458 1352030 . - 0 ID=cds-WP_038271312.1;Parent=gene-LPH58_RS05875;Dbxref=Genbank:WP_038271312.1;Name=WP_038271312.1;Ontology_term=GO:0009372;gbkey=CDS;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451122.1;locus_tag=LPH58_RS05875;product=Ax21 family protein;protein_id=WP_038271312.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1352761 1352997 . + . ID=gene-LPH58_RS05880;Name=LPH58_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05880;old_locus_tag=LPH58_05880 NZ_CP087690.1 GeneMarkS-2+ CDS 1352761 1352997 . + 0 ID=cds-WP_152536622.1;Parent=gene-LPH58_RS05880;Dbxref=Genbank:WP_152536622.1;Name=WP_152536622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05880;product=hypothetical protein;protein_id=WP_152536622.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1355089 1355244 . - . ID=gene-LPH58_RS05885;Name=LPH58_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05885;old_locus_tag=LPH58_05885 NZ_CP087690.1 GeneMarkS-2+ CDS 1355089 1355244 . - 0 ID=cds-WP_160165180.1;Parent=gene-LPH58_RS05885;Dbxref=Genbank:WP_160165180.1;Name=WP_160165180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05885;product=hypothetical protein;protein_id=WP_160165180.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1355720 1355812 . - . ID=gene-LPH58_RS05890;Name=LPH58_RS05890;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS05890;old_locus_tag=LPH58_05890 NZ_CP087690.1 tRNAscan-SE tRNA 1355720 1355812 . - . ID=rna-LPH58_RS05890;Parent=gene-LPH58_RS05890;anticodon=(pos:complement(1355776..1355778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05890;product=tRNA-Ser NZ_CP087690.1 tRNAscan-SE exon 1355720 1355812 . - . ID=exon-LPH58_RS05890-1;Parent=rna-LPH58_RS05890;anticodon=(pos:complement(1355776..1355778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS05890;product=tRNA-Ser NZ_CP087690.1 RefSeq gene 1355959 1357851 . + . ID=gene-LPH58_RS05895;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LPH58_RS05895;old_locus_tag=LPH58_05895 NZ_CP087690.1 Protein Homology CDS 1355959 1357851 . + 0 ID=cds-WP_038271314.1;Parent=gene-LPH58_RS05895;Dbxref=Genbank:WP_038271314.1;Name=WP_038271314.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155800.1;locus_tag=LPH58_RS05895;product=DNA polymerase III subunit gamma/tau;protein_id=WP_038271314.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1357858 1358178 . + . ID=gene-LPH58_RS05900;Name=LPH58_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05900;old_locus_tag=LPH58_05900 NZ_CP087690.1 Protein Homology CDS 1357858 1358178 . + 0 ID=cds-WP_038271372.1;Parent=gene-LPH58_RS05900;Dbxref=Genbank:WP_038271372.1;Name=WP_038271372.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346622.1;locus_tag=LPH58_RS05900;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_038271372.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1358364 1358960 . + . ID=gene-LPH58_RS05905;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LPH58_RS05905;old_locus_tag=LPH58_05905 NZ_CP087690.1 Protein Homology CDS 1358364 1358960 . + 0 ID=cds-WP_038271315.1;Parent=gene-LPH58_RS05905;Dbxref=Genbank:WP_038271315.1;Name=WP_038271315.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483843.1;locus_tag=LPH58_RS05905;product=recombination mediator RecR;protein_id=WP_038271315.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1359037 1359381 . + . ID=gene-LPH58_RS05910;Name=LPH58_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05910;old_locus_tag=LPH58_05910 NZ_CP087690.1 Protein Homology CDS 1359037 1359381 . + 0 ID=cds-WP_038271316.1;Parent=gene-LPH58_RS05910;Dbxref=Genbank:WP_038271316.1;Name=WP_038271316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894278.1;locus_tag=LPH58_RS05910;product=histidine triad nucleotide-binding protein;protein_id=WP_038271316.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1359450 1359971 . - . ID=gene-LPH58_RS05915;Name=LPH58_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05915;old_locus_tag=LPH58_05915 NZ_CP087690.1 Protein Homology CDS 1359450 1359971 . - 0 ID=cds-WP_038271317.1;Parent=gene-LPH58_RS05915;Dbxref=Genbank:WP_038271317.1;Name=WP_038271317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005920486.1;locus_tag=LPH58_RS05915;product=Slp family lipoprotein;protein_id=WP_038271317.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1359865 1361910 . - . ID=gene-LPH58_RS05920;Name=LPH58_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05920;old_locus_tag=LPH58_05920 NZ_CP087690.1 Protein Homology CDS 1359865 1361910 . - 0 ID=cds-WP_038271318.1;Parent=gene-LPH58_RS05920;Dbxref=Genbank:WP_038271318.1;Name=WP_038271318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572798.1;locus_tag=LPH58_RS05920;product=DUF3488 and transglutaminase-like domain-containing protein;protein_id=WP_038271318.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1361903 1362862 . - . ID=gene-LPH58_RS05925;Name=LPH58_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05925;old_locus_tag=LPH58_05925 NZ_CP087690.1 Protein Homology CDS 1361903 1362862 . - 0 ID=cds-WP_038271319.1;Parent=gene-LPH58_RS05925;Dbxref=Genbank:WP_038271319.1;Name=WP_038271319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016850007.1;locus_tag=LPH58_RS05925;product=DUF58 domain-containing protein;protein_id=WP_038271319.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1362865 1363824 . - . ID=gene-LPH58_RS05930;Name=LPH58_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05930;old_locus_tag=LPH58_05930 NZ_CP087690.1 Protein Homology CDS 1362865 1363824 . - 0 ID=cds-WP_114867219.1;Parent=gene-LPH58_RS05930;Dbxref=Genbank:WP_114867219.1;Name=WP_114867219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502249.1;locus_tag=LPH58_RS05930;product=MoxR family ATPase;protein_id=WP_114867219.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1363852 1365681 . + . ID=gene-LPH58_RS05935;Name=LPH58_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05935;old_locus_tag=LPH58_05935 NZ_CP087690.1 Protein Homology CDS 1363852 1365681 . + 0 ID=cds-WP_171898081.1;Parent=gene-LPH58_RS05935;Dbxref=Genbank:WP_171898081.1;Name=WP_171898081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115355.1;locus_tag=LPH58_RS05935;product=glycosyltransferase family 39 protein;protein_id=WP_171898081.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1366190 1366699 . + . ID=gene-LPH58_RS05940;Name=LPH58_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05940;old_locus_tag=LPH58_05940 NZ_CP087690.1 Protein Homology CDS 1366190 1366699 . + 0 ID=cds-WP_038271323.1;Parent=gene-LPH58_RS05940;Dbxref=Genbank:WP_038271323.1;Name=WP_038271323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002814328.1;locus_tag=LPH58_RS05940;product=YceD family protein;protein_id=WP_038271323.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1366798 1366992 . + . ID=gene-LPH58_RS05945;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LPH58_RS05945;old_locus_tag=LPH58_05945 NZ_CP087690.1 Protein Homology CDS 1366798 1366992 . + 0 ID=cds-WP_038271324.1;Parent=gene-LPH58_RS05945;Dbxref=Genbank:WP_038271324.1;Name=WP_038271324.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302036.1;locus_tag=LPH58_RS05945;product=50S ribosomal protein L32;protein_id=WP_038271324.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1367090 1368064 . + . ID=gene-LPH58_RS05950;Name=LPH58_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05950;old_locus_tag=LPH58_05950 NZ_CP087690.1 Protein Homology CDS 1367090 1368064 . + 0 ID=cds-WP_038271325.1;Parent=gene-LPH58_RS05950;Dbxref=Genbank:WP_038271325.1;Name=WP_038271325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502254.1;locus_tag=LPH58_RS05950;product=ketoacyl-ACP synthase III;protein_id=WP_038271325.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1368309 1368542 . - . ID=gene-LPH58_RS05955;Name=LPH58_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05955;old_locus_tag=LPH58_05955 NZ_CP087690.1 Protein Homology CDS 1368309 1368542 . - 0 ID=cds-WP_038271326.1;Parent=gene-LPH58_RS05955;Dbxref=Genbank:WP_038271326.1;Name=WP_038271326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013676.2;locus_tag=LPH58_RS05955;product=hypothetical protein;protein_id=WP_038271326.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1369600 1369791 . - . ID=gene-LPH58_RS05960;Name=LPH58_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05960;old_locus_tag=LPH58_05960 NZ_CP087690.1 GeneMarkS-2+ CDS 1369600 1369791 . - 0 ID=cds-WP_081755444.1;Parent=gene-LPH58_RS05960;Dbxref=Genbank:WP_081755444.1;Name=WP_081755444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS05960;product=hypothetical protein;protein_id=WP_081755444.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1370601 1372568 . - . ID=gene-LPH58_RS05965;Name=LPH58_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05965;old_locus_tag=LPH58_05965 NZ_CP087690.1 Protein Homology CDS 1370601 1372568 . - 0 ID=cds-WP_069636213.1;Parent=gene-LPH58_RS05965;Dbxref=Genbank:WP_069636213.1;Name=WP_069636213.1;Ontology_term=GO:0030245,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=cellulose catabolic process|0030245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084038.1;locus_tag=LPH58_RS05965;product=glycoside hydrolase family 6 protein;protein_id=WP_069636213.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1373859 1375418 . - . ID=gene-LPH58_RS05970;Name=LPH58_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05970;old_locus_tag=LPH58_05970 NZ_CP087690.1 Protein Homology CDS 1373859 1375418 . - 0 ID=cds-WP_038271330.1;Parent=gene-LPH58_RS05970;Dbxref=Genbank:WP_038271330.1;Name=WP_038271330.1;Ontology_term=GO:0009098,GO:0019752,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA,carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156818.1;locus_tag=LPH58_RS05970;product=2-isopropylmalate synthase;protein_id=WP_038271330.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1375473 1376525 . - . ID=gene-LPH58_RS05975;Name=LPH58_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05975;old_locus_tag=LPH58_05975 NZ_CP087690.1 Protein Homology CDS 1375473 1376525 . - 0 ID=cds-WP_038271331.1;Parent=gene-LPH58_RS05975;Dbxref=Genbank:WP_038271331.1;Name=WP_038271331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572807.1;locus_tag=LPH58_RS05975;product=threonine dehydratase;protein_id=WP_038271331.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1376643 1376888 . - . ID=gene-LPH58_RS05980;Name=LPH58_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05980;old_locus_tag=LPH58_05980 NZ_CP087690.1 Protein Homology CDS 1376643 1376888 . - 0 ID=cds-WP_038271332.1;Parent=gene-LPH58_RS05980;Dbxref=Genbank:WP_038271332.1;Name=WP_038271332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084875.1;locus_tag=LPH58_RS05980;product=acetolactate synthase;protein_id=WP_038271332.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1376872 1378629 . - . ID=gene-LPH58_RS05985;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=LPH58_RS05985;old_locus_tag=LPH58_05985 NZ_CP087690.1 Protein Homology CDS 1376872 1378629 . - 0 ID=cds-WP_038271333.1;Parent=gene-LPH58_RS05985;Dbxref=Genbank:WP_038271333.1;Name=WP_038271333.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804901.1;locus_tag=LPH58_RS05985;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_038271333.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1378675 1379682 . - . ID=gene-LPH58_RS05990;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LPH58_RS05990;old_locus_tag=LPH58_05990 NZ_CP087690.1 Protein Homology CDS 1378675 1379682 . - 0 ID=cds-WP_038271334.1;Parent=gene-LPH58_RS05990;Dbxref=Genbank:WP_038271334.1;Name=WP_038271334.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852238.1;locus_tag=LPH58_RS05990;product=ketol-acid reductoisomerase;protein_id=WP_038271334.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1380835 1383018 . - . ID=gene-LPH58_RS05995;Name=LPH58_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS05995;old_locus_tag=LPH58_05995 NZ_CP087690.1 Protein Homology CDS 1380835 1383018 . - 0 ID=cds-WP_038271335.1;Parent=gene-LPH58_RS05995;Dbxref=Genbank:WP_038271335.1;Name=WP_038271335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482716.1;locus_tag=LPH58_RS05995;product=carboxy terminal-processing peptidase;protein_id=WP_038271335.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1384014 1385003 . - . ID=gene-LPH58_RS06000;Name=LPH58_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06000;old_locus_tag=LPH58_06000 NZ_CP087690.1 Protein Homology CDS 1384014 1385003 . - 0 ID=cds-WP_038271336.1;Parent=gene-LPH58_RS06000;Dbxref=Genbank:WP_038271336.1;Name=WP_038271336.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084871.1;locus_tag=LPH58_RS06000;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_038271336.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1385390 1385821 . - . ID=gene-LPH58_RS06005;Name=LPH58_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06005;old_locus_tag=LPH58_06005 NZ_CP087690.1 Protein Homology CDS 1385390 1385821 . - 0 ID=cds-WP_038271337.1;Parent=gene-LPH58_RS06005;Dbxref=Genbank:WP_038271337.1;Name=WP_038271337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084870.1;locus_tag=LPH58_RS06005;product=organic hydroperoxide resistance protein;protein_id=WP_038271337.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1386323 1387495 . - . ID=gene-LPH58_RS06010;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LPH58_RS06010;old_locus_tag=LPH58_06010 NZ_CP087690.1 Protein Homology CDS 1386323 1387495 . - 0 ID=cds-WP_038271338.1;Parent=gene-LPH58_RS06010;Dbxref=Genbank:WP_038271338.1;Name=WP_038271338.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974994.1;locus_tag=LPH58_RS06010;product=cell division protein ZapE;protein_id=WP_038271338.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1387540 1388202 . - . ID=gene-LPH58_RS06015;Name=LPH58_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06015;old_locus_tag=LPH58_06015 NZ_CP087690.1 Protein Homology CDS 1387540 1388202 . - 0 ID=cds-WP_038271377.1;Parent=gene-LPH58_RS06015;Dbxref=Genbank:WP_038271377.1;Name=WP_038271377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035515.1;locus_tag=LPH58_RS06015;product=alpha/beta hydrolase;protein_id=WP_038271377.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1388541 1389869 . - . ID=gene-LPH58_RS06020;Name=LPH58_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06020;old_locus_tag=LPH58_06020 NZ_CP087690.1 Protein Homology CDS 1388541 1389869 . - 0 ID=cds-WP_038271339.1;Parent=gene-LPH58_RS06020;Dbxref=Genbank:WP_038271339.1;Name=WP_038271339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851403.1;locus_tag=LPH58_RS06020;product=GTP-binding protein;protein_id=WP_038271339.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1390339 1390503 . - . ID=gene-LPH58_RS06025;Name=LPH58_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06025;old_locus_tag=LPH58_06025 NZ_CP087690.1 GeneMarkS-2+ CDS 1390339 1390503 . - 0 ID=cds-WP_114867124.1;Parent=gene-LPH58_RS06025;Dbxref=Genbank:WP_114867124.1;Name=WP_114867124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06025;product=transposase;protein_id=WP_114867124.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1390820 1391671 . - . ID=gene-LPH58_RS06030;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LPH58_RS06030;old_locus_tag=LPH58_06030 NZ_CP087690.1 Protein Homology CDS 1390820 1391671 . - 0 ID=cds-WP_038271340.1;Parent=gene-LPH58_RS06030;Dbxref=Genbank:WP_038271340.1;Name=WP_038271340.1;Ontology_term=GO:0009152,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237160.1;locus_tag=LPH58_RS06030;product=formyltetrahydrofolate deformylase;protein_id=WP_038271340.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1392592 1393239 . + . ID=gene-LPH58_RS06035;Name=LPH58_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06035;old_locus_tag=LPH58_06035 NZ_CP087690.1 Protein Homology CDS 1392592 1393239 . + 0 ID=cds-WP_038271341.1;Parent=gene-LPH58_RS06035;Dbxref=Genbank:WP_038271341.1;Name=WP_038271341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894298.1;locus_tag=LPH58_RS06035;product=SCP2 sterol-binding domain-containing protein;protein_id=WP_038271341.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1393236 1394894 . + . ID=gene-LPH58_RS06040;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LPH58_RS06040;old_locus_tag=LPH58_06040 NZ_CP087690.1 Protein Homology CDS 1393236 1394894 . + 0 ID=cds-WP_038271342.1;Parent=gene-LPH58_RS06040;Dbxref=Genbank:WP_038271342.1;Name=WP_038271342.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084864.1;locus_tag=LPH58_RS06040;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_038271342.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1395083 1395544 . - . ID=gene-LPH58_RS06045;Name=LPH58_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06045;old_locus_tag=LPH58_06045 NZ_CP087690.1 Protein Homology CDS 1395083 1395544 . - 0 ID=cds-WP_038271343.1;Parent=gene-LPH58_RS06045;Dbxref=Genbank:WP_038271343.1;Name=WP_038271343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894300.1;locus_tag=LPH58_RS06045;product=thioredoxin family protein;protein_id=WP_038271343.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1395836 1397041 . - . ID=gene-LPH58_RS06050;Name=LPH58_RS06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06050;old_locus_tag=LPH58_06050 NZ_CP087690.1 Protein Homology CDS 1395836 1397041 . - 0 ID=cds-WP_038271378.1;Parent=gene-LPH58_RS06050;Dbxref=Genbank:WP_038271378.1;Name=WP_038271378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894301.1;locus_tag=LPH58_RS06050;product=trans-2-enoyl-CoA reductase family protein;protein_id=WP_038271378.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1398159 1398509 . - . ID=gene-LPH58_RS06055;Name=LPH58_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06055;old_locus_tag=LPH58_06055 NZ_CP087690.1 Protein Homology CDS 1398159 1398509 . - 0 ID=cds-WP_230430835.1;Parent=gene-LPH58_RS06055;Dbxref=Genbank:WP_230430835.1;Name=WP_230430835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607767.1;locus_tag=LPH58_RS06055;product=hypothetical protein;protein_id=WP_230430835.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1398710 1399558 . - . ID=gene-LPH58_RS06060;Name=LPH58_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06060;old_locus_tag=LPH58_06060 NZ_CP087690.1 Protein Homology CDS 1398710 1399558 . - 0 ID=cds-WP_038271345.1;Parent=gene-LPH58_RS06060;Dbxref=Genbank:WP_038271345.1;Name=WP_038271345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894303.1;locus_tag=LPH58_RS06060;product=DUF2145 domain-containing protein;protein_id=WP_038271345.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1399586 1400551 . - . ID=gene-LPH58_RS06065;Name=LPH58_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06065;old_locus_tag=LPH58_06065 NZ_CP087690.1 Protein Homology CDS 1399586 1400551 . - 0 ID=cds-WP_038271346.1;Parent=gene-LPH58_RS06065;Dbxref=Genbank:WP_038271346.1;Name=WP_038271346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572824.1;locus_tag=LPH58_RS06065;product=ELM1/GtrOC1 family putative glycosyltransferase;protein_id=WP_038271346.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1400666 1401256 . + . ID=gene-LPH58_RS06070;Name=LPH58_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06070;old_locus_tag=LPH58_06070 NZ_CP087690.1 Protein Homology CDS 1400666 1401256 . + 0 ID=cds-WP_038271347.1;Parent=gene-LPH58_RS06070;Dbxref=Genbank:WP_038271347.1;Name=WP_038271347.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159505.1;locus_tag=LPH58_RS06070;product=malonic semialdehyde reductase;protein_id=WP_038271347.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1401319 1402032 . + . ID=gene-LPH58_RS06075;Name=LPH58_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06075;old_locus_tag=LPH58_06075 NZ_CP087690.1 Protein Homology CDS 1401319 1402032 . + 0 ID=cds-WP_081755445.1;Parent=gene-LPH58_RS06075;Dbxref=Genbank:WP_081755445.1;Name=WP_081755445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851394.1;locus_tag=LPH58_RS06075;product=YceI family protein;protein_id=WP_081755445.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1402301 1403086 . - . ID=gene-LPH58_RS06080;Name=LPH58_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06080;old_locus_tag=LPH58_06080 NZ_CP087690.1 Protein Homology CDS 1402301 1403086 . - 0 ID=cds-WP_038271348.1;Parent=gene-LPH58_RS06080;Dbxref=Genbank:WP_038271348.1;Name=WP_038271348.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341074.1;locus_tag=LPH58_RS06080;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_038271348.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1403281 1404690 . + . ID=gene-LPH58_RS06085;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LPH58_RS06085;old_locus_tag=LPH58_06085 NZ_CP087690.1 Protein Homology CDS 1403281 1404690 . + 0 ID=cds-WP_038271349.1;Parent=gene-LPH58_RS06085;Dbxref=Genbank:WP_038271349.1;Name=WP_038271349.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157345.1;locus_tag=LPH58_RS06085;product=type I glutamate--ammonia ligase;protein_id=WP_038271349.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1404971 1405309 . + . ID=gene-LPH58_RS06090;Name=LPH58_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06090;old_locus_tag=LPH58_06090 NZ_CP087690.1 Protein Homology CDS 1404971 1405309 . + 0 ID=cds-WP_038271350.1;Parent=gene-LPH58_RS06090;Dbxref=Genbank:WP_038271350.1;Name=WP_038271350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016654695.1;locus_tag=LPH58_RS06090;product=P-II family nitrogen regulator;protein_id=WP_038271350.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1405329 1406777 . + . ID=gene-LPH58_RS06095;Name=amt;gbkey=Gene;gene=amt;gene_biotype=protein_coding;locus_tag=LPH58_RS06095;old_locus_tag=LPH58_06095 NZ_CP087690.1 Protein Homology CDS 1405329 1406777 . + 0 ID=cds-WP_081755446.1;Parent=gene-LPH58_RS06095;Dbxref=Genbank:WP_081755446.1;Name=WP_081755446.1;Ontology_term=GO:0072488,GO:0008519;gbkey=CDS;gene=amt;go_function=ammonium transmembrane transporter activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237112.1;locus_tag=LPH58_RS06095;product=ammonium transporter;protein_id=WP_081755446.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1406999 1407484 . + . ID=gene-LPH58_RS06100;Name=LPH58_RS06100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06100;old_locus_tag=LPH58_06100;partial=true;pseudo=true;start_range=.,1406999 NZ_CP087690.1 Protein Homology CDS 1406999 1407484 . + 0 ID=cds-LPH58_RS06100;Parent=gene-LPH58_RS06100;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894314.1;locus_tag=LPH58_RS06100;partial=true;product=nitrogen regulation protein NR(I);pseudo=true;start_range=.,1406999;transl_table=11 NZ_CP087690.1 RefSeq gene 1407842 1408306 . + . ID=gene-LPH58_RS06105;Name=LPH58_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06105;old_locus_tag=LPH58_06105 NZ_CP087690.1 GeneMarkS-2+ CDS 1407842 1408306 . + 0 ID=cds-WP_038271352.1;Parent=gene-LPH58_RS06105;Dbxref=Genbank:WP_038271352.1;Name=WP_038271352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06105;product=hypothetical protein;protein_id=WP_038271352.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1408413 1409282 . - . ID=gene-LPH58_RS06110;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LPH58_RS06110;old_locus_tag=LPH58_06110 NZ_CP087690.1 Protein Homology CDS 1408413 1409282 . - 0 ID=cds-WP_038271353.1;Parent=gene-LPH58_RS06110;Dbxref=Genbank:WP_038271353.1;Name=WP_038271353.1;Ontology_term=GO:0019363,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=pyridine nucleotide biosynthetic process|0019363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572874.1;locus_tag=LPH58_RS06110;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_038271353.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1409279 1410817 . - . ID=gene-LPH58_RS06115;Name=LPH58_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06115;old_locus_tag=LPH58_06115 NZ_CP087690.1 Protein Homology CDS 1409279 1410817 . - 0 ID=cds-WP_038271354.1;Parent=gene-LPH58_RS06115;Dbxref=Genbank:WP_038271354.1;Name=WP_038271354.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572875.1;locus_tag=LPH58_RS06115;product=L-aspartate oxidase;protein_id=WP_038271354.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1410830 1411831 . - . ID=gene-LPH58_RS06120;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LPH58_RS06120;old_locus_tag=LPH58_06120 NZ_CP087690.1 Protein Homology CDS 1410830 1411831 . - 0 ID=cds-WP_201745829.1;Parent=gene-LPH58_RS06120;Dbxref=Genbank:WP_201745829.1;Name=WP_201745829.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572876.1;locus_tag=LPH58_RS06120;product=quinolinate synthase NadA;protein_id=WP_201745829.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1412513 1413259 . - . ID=gene-LPH58_RS06125;Name=LPH58_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06125;old_locus_tag=LPH58_06125 NZ_CP087690.1 Protein Homology CDS 1412513 1413259 . - 0 ID=cds-WP_114867125.1;Parent=gene-LPH58_RS06125;Dbxref=Genbank:WP_114867125.1;Name=WP_114867125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894387.1;locus_tag=LPH58_RS06125;product=superoxide dismutase;protein_id=WP_114867125.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1413920 1414726 . + . ID=gene-LPH58_RS06130;Name=LPH58_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06130;old_locus_tag=LPH58_06130 NZ_CP087690.1 Protein Homology CDS 1413920 1414726 . + 0 ID=cds-WP_038271356.1;Parent=gene-LPH58_RS06130;Dbxref=Genbank:WP_038271356.1;Name=WP_038271356.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340561.1;locus_tag=LPH58_RS06130;product=TatD family hydrolase;protein_id=WP_038271356.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1414832 1415845 . + . ID=gene-LPH58_RS06135;Name=LPH58_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06135;old_locus_tag=LPH58_06135 NZ_CP087690.1 Protein Homology CDS 1414832 1415845 . + 0 ID=cds-WP_038271357.1;Parent=gene-LPH58_RS06135;Dbxref=Genbank:WP_038271357.1;Name=WP_038271357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894341.1;locus_tag=LPH58_RS06135;product=zonular occludens toxin domain-containing protein;protein_id=WP_038271357.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1415891 1416130 . - . ID=gene-LPH58_RS06140;Name=LPH58_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06140;old_locus_tag=LPH58_06140 NZ_CP087690.1 Protein Homology CDS 1415891 1416130 . - 0 ID=cds-WP_038271358.1;Parent=gene-LPH58_RS06140;Dbxref=Genbank:WP_038271358.1;Name=WP_038271358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084072.1;locus_tag=LPH58_RS06140;product=hypothetical protein;protein_id=WP_038271358.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1416207 1416551 . - . ID=gene-LPH58_RS06145;Name=LPH58_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06145;old_locus_tag=LPH58_06145 NZ_CP087690.1 Protein Homology CDS 1416207 1416551 . - 0 ID=cds-WP_038271360.1;Parent=gene-LPH58_RS06145;Dbxref=Genbank:WP_038271360.1;Name=WP_038271360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091322.1;locus_tag=LPH58_RS06145;product=DUF3653 domain-containing protein;protein_id=WP_038271360.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1416610 1417077 . - . ID=gene-LPH58_RS06150;Name=LPH58_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06150;old_locus_tag=LPH58_06150 NZ_CP087690.1 Protein Homology CDS 1416610 1417077 . - 0 ID=cds-WP_160165181.1;Parent=gene-LPH58_RS06150;Dbxref=Genbank:WP_160165181.1;Name=WP_160165181.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.2;locus_tag=LPH58_RS06150;product=DUF3693 domain-containing protein;protein_id=WP_160165181.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1417166 1417327 . + . ID=gene-LPH58_RS06155;Name=LPH58_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06155;old_locus_tag=LPH58_06155 NZ_CP087690.1 GeneMarkS-2+ CDS 1417166 1417327 . + 0 ID=cds-WP_160165182.1;Parent=gene-LPH58_RS06155;Dbxref=Genbank:WP_160165182.1;Name=WP_160165182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06155;product=hypothetical protein;protein_id=WP_160165182.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1417331 1417594 . + . ID=gene-LPH58_RS06160;Name=LPH58_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06160;old_locus_tag=LPH58_06160 NZ_CP087690.1 GeneMarkS-2+ CDS 1417331 1417594 . + 0 ID=cds-WP_162814095.1;Parent=gene-LPH58_RS06160;Dbxref=Genbank:WP_162814095.1;Name=WP_162814095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06160;product=hypothetical protein;protein_id=WP_162814095.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1417643 1417843 . + . ID=gene-LPH58_RS06165;Name=LPH58_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06165;old_locus_tag=LPH58_06165 NZ_CP087690.1 Protein Homology CDS 1417643 1417843 . + 0 ID=cds-WP_038273077.1;Parent=gene-LPH58_RS06165;Dbxref=Genbank:WP_038273077.1;Name=WP_038273077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH58_RS06165;product=hypothetical protein;protein_id=WP_038273077.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1417963 1418106 . + . ID=gene-LPH58_RS06170;Name=LPH58_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06170;old_locus_tag=LPH58_06170 NZ_CP087690.1 GeneMarkS-2+ CDS 1417963 1418106 . + 0 ID=cds-WP_160165233.1;Parent=gene-LPH58_RS06170;Dbxref=Genbank:WP_160165233.1;Name=WP_160165233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06170;product=hypothetical protein;protein_id=WP_160165233.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1418303 1418890 . + . ID=gene-LPH58_RS06175;Name=LPH58_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06175;old_locus_tag=LPH58_06175 NZ_CP087690.1 Protein Homology CDS 1418303 1418890 . + 0 ID=cds-WP_038273076.1;Parent=gene-LPH58_RS06175;Dbxref=Genbank:WP_038273076.1;Name=WP_038273076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894347.1;locus_tag=LPH58_RS06175;product=hypothetical protein;protein_id=WP_038273076.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1419166 1419480 . + . ID=gene-LPH58_RS06180;Name=LPH58_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06180;old_locus_tag=LPH58_06180 NZ_CP087690.1 Protein Homology CDS 1419166 1419480 . + 0 ID=cds-WP_230428211.1;Parent=gene-LPH58_RS06180;Dbxref=Genbank:WP_230428211.1;Name=WP_230428211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474436.1;locus_tag=LPH58_RS06180;product=hypothetical protein;protein_id=WP_230428211.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1419483 1419689 . + . ID=gene-LPH58_RS06185;Name=LPH58_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06185;old_locus_tag=LPH58_06185 NZ_CP087690.1 Protein Homology CDS 1419483 1419689 . + 0 ID=cds-WP_038273075.1;Parent=gene-LPH58_RS06185;Dbxref=Genbank:WP_038273075.1;Name=WP_038273075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH58_RS06185;product=hypothetical protein;protein_id=WP_038273075.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1419698 1419934 . + . ID=gene-LPH58_RS06190;Name=LPH58_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06190;old_locus_tag=LPH58_06190 NZ_CP087690.1 Protein Homology CDS 1419698 1419934 . + 0 ID=cds-WP_230428212.1;Parent=gene-LPH58_RS06190;Dbxref=Genbank:WP_230428212.1;Name=WP_230428212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382572.1;locus_tag=LPH58_RS06190;product=major capsid protein;protein_id=WP_230428212.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1420114 1421499 . + . ID=gene-LPH58_RS06195;Name=LPH58_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06195;old_locus_tag=LPH58_06195 NZ_CP087690.1 Protein Homology CDS 1420114 1421499 . + 0 ID=cds-WP_230428213.1;Parent=gene-LPH58_RS06195;Dbxref=Genbank:WP_230428213.1;Name=WP_230428213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097844.1;locus_tag=LPH58_RS06195;product=furin-like repeat-containing protein;protein_id=WP_230428213.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1421502 1421846 . + . ID=gene-LPH58_RS06200;Name=LPH58_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06200;old_locus_tag=LPH58_06200 NZ_CP087690.1 Protein Homology CDS 1421502 1421846 . + 0 ID=cds-WP_038273069.1;Parent=gene-LPH58_RS06200;Dbxref=Genbank:WP_038273069.1;Name=WP_038273069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH58_RS06200;product=DUF2523 family protein;protein_id=WP_038273069.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1421859 1422986 . + . ID=gene-LPH58_RS06205;Name=LPH58_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06205;old_locus_tag=LPH58_06205 NZ_CP087690.1 Protein Homology CDS 1421859 1422986 . + 0 ID=cds-WP_114867127.1;Parent=gene-LPH58_RS06205;Dbxref=Genbank:WP_114867127.1;Name=WP_114867127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH58_RS06205;product=hypothetical protein;protein_id=WP_114867127.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1423076 1423348 . + . ID=gene-LPH58_RS06210;Name=LPH58_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06210;old_locus_tag=LPH58_06210 NZ_CP087690.1 Protein Homology CDS 1423076 1423348 . + 0 ID=cds-WP_038272460.1;Parent=gene-LPH58_RS06210;Dbxref=Genbank:WP_038272460.1;Name=WP_038272460.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015947.2;locus_tag=LPH58_RS06210;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_038272460.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1423357 1423761 . + . ID=gene-LPH58_RS06215;Name=LPH58_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06215;old_locus_tag=LPH58_06215 NZ_CP087690.1 Protein Homology CDS 1423357 1423761 . + 0 ID=cds-WP_200866210.1;Parent=gene-LPH58_RS06215;Dbxref=Genbank:WP_200866210.1;Name=WP_200866210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851658.1;locus_tag=LPH58_RS06215;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_200866210.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1423824 1424168 . - . ID=gene-LPH58_RS06220;Name=LPH58_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06220;old_locus_tag=LPH58_06220 NZ_CP087690.1 Protein Homology CDS 1423824 1424168 . - 0 ID=cds-WP_038272464.1;Parent=gene-LPH58_RS06220;Dbxref=Genbank:WP_038272464.1;Name=WP_038272464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087000.1;locus_tag=LPH58_RS06220;product=DUF3653 domain-containing protein;protein_id=WP_038272464.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1424335 1424979 . - . ID=gene-LPH58_RS06225;Name=LPH58_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06225;old_locus_tag=LPH58_06225 NZ_CP087690.1 Protein Homology CDS 1424335 1424979 . - 0 ID=cds-WP_038272466.1;Parent=gene-LPH58_RS06225;Dbxref=Genbank:WP_038272466.1;Name=WP_038272466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017910762.1;locus_tag=LPH58_RS06225;product=histidine phosphatase family protein;protein_id=WP_038272466.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1425086 1427161 . - . ID=gene-LPH58_RS06230;Name=LPH58_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06230;old_locus_tag=LPH58_06230 NZ_CP087690.1 Protein Homology CDS 1425086 1427161 . - 0 ID=cds-WP_230428285.1;Parent=gene-LPH58_RS06230;Dbxref=Genbank:WP_230428285.1;Name=WP_230428285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572915.1;locus_tag=LPH58_RS06230;product=S46 family peptidase;protein_id=WP_230428285.1;transl_table=11 NZ_CP087690.1 cmsearch riboswitch 1427409 1427507 . + . ID=id-NZ_CP087690.1:1427409..1427507;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.1;regulatory_class=riboswitch NZ_CP087690.1 RefSeq gene 1427613 1429370 . + . ID=gene-LPH58_RS06235;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LPH58_RS06235;old_locus_tag=LPH58_06235 NZ_CP087690.1 Protein Homology CDS 1427613 1429370 . + 0 ID=cds-WP_051482371.1;Parent=gene-LPH58_RS06235;Dbxref=Genbank:WP_051482371.1;Name=WP_051482371.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097836.1;locus_tag=LPH58_RS06235;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_051482371.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1429505 1430284 . + . ID=gene-LPH58_RS06240;Name=LPH58_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06240;old_locus_tag=LPH58_06240 NZ_CP087690.1 Protein Homology CDS 1429505 1430284 . + 0 ID=cds-WP_038272469.1;Parent=gene-LPH58_RS06240;Dbxref=Genbank:WP_038272469.1;Name=WP_038272469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966679.1;locus_tag=LPH58_RS06240;product=ferredoxin--NADP reductase;protein_id=WP_038272469.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1430288 1430779 . - . ID=gene-LPH58_RS06245;Name=LPH58_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06245;old_locus_tag=LPH58_06245 NZ_CP087690.1 Protein Homology CDS 1430288 1430779 . - 0 ID=cds-WP_038272471.1;Parent=gene-LPH58_RS06245;Dbxref=Genbank:WP_038272471.1;Name=WP_038272471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572911.1;locus_tag=LPH58_RS06245;product=glutathione peroxidase;protein_id=WP_038272471.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1431344 1432876 . + . ID=gene-LPH58_RS06250;Name=LPH58_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06250;old_locus_tag=LPH58_06250 NZ_CP087690.1 Protein Homology CDS 1431344 1432876 . + 0 ID=cds-WP_038272473.1;Parent=gene-LPH58_RS06250;Dbxref=Genbank:WP_038272473.1;Name=WP_038272473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852766.1;locus_tag=LPH58_RS06250;product=peptide MFS transporter;protein_id=WP_038272473.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1433039 1433761 . - . ID=gene-LPH58_RS06255;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=LPH58_RS06255;old_locus_tag=LPH58_06255 NZ_CP087690.1 Protein Homology CDS 1433039 1433761 . - 0 ID=cds-WP_171898053.1;Parent=gene-LPH58_RS06255;Dbxref=Genbank:WP_171898053.1;Name=WP_171898053.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894358.1;locus_tag=LPH58_RS06255;product=deoxyribonuclease V;protein_id=WP_171898053.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1433857 1434606 . + . ID=gene-LPH58_RS06260;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LPH58_RS06260;old_locus_tag=LPH58_06260 NZ_CP087690.1 Protein Homology CDS 1433857 1434606 . + 0 ID=cds-WP_038272477.1;Parent=gene-LPH58_RS06260;Dbxref=Genbank:WP_038272477.1;Name=WP_038272477.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167506.1;locus_tag=LPH58_RS06260;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_038272477.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1434677 1435357 . - . ID=gene-LPH58_RS06265;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LPH58_RS06265;old_locus_tag=LPH58_06265 NZ_CP087690.1 Protein Homology CDS 1434677 1435357 . - 0 ID=cds-WP_051482372.1;Parent=gene-LPH58_RS06265;Dbxref=Genbank:WP_051482372.1;Name=WP_051482372.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159812.1;locus_tag=LPH58_RS06265;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_051482372.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1435402 1436229 . - . ID=gene-LPH58_RS06270;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LPH58_RS06270;old_locus_tag=LPH58_06270 NZ_CP087690.1 Protein Homology CDS 1435402 1436229 . - 0 ID=cds-WP_038272479.1;Parent=gene-LPH58_RS06270;Dbxref=Genbank:WP_038272479.1;Name=WP_038272479.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572906.1;locus_tag=LPH58_RS06270;product=tol-pal system protein YbgF;protein_id=WP_038272479.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1436233 1436766 . - . ID=gene-LPH58_RS06275;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LPH58_RS06275;old_locus_tag=LPH58_06275 NZ_CP087690.1 Protein Homology CDS 1436233 1436766 . - 0 ID=cds-WP_038272481.1;Parent=gene-LPH58_RS06275;Dbxref=Genbank:WP_038272481.1;Name=WP_038272481.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344309.1;locus_tag=LPH58_RS06275;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_038272481.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1436829 1438154 . - . ID=gene-LPH58_RS06280;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LPH58_RS06280;old_locus_tag=LPH58_06280 NZ_CP087690.1 Protein Homology CDS 1436829 1438154 . - 0 ID=cds-WP_038272484.1;Parent=gene-LPH58_RS06280;Dbxref=Genbank:WP_038272484.1;Name=WP_038272484.1;Ontology_term=GO:0006810,GO:0005215,GO:0030288;gbkey=CDS;gene=tolB;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445349.1;locus_tag=LPH58_RS06280;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_038272484.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1438620 1439645 . - . ID=gene-LPH58_RS06285;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LPH58_RS06285;old_locus_tag=LPH58_06285 NZ_CP087690.1 Protein Homology CDS 1438620 1439645 . - 0 ID=cds-WP_038272486.1;Parent=gene-LPH58_RS06285;Dbxref=Genbank:WP_038272486.1;Name=WP_038272486.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085419.1;locus_tag=LPH58_RS06285;product=cell envelope integrity protein TolA;protein_id=WP_038272486.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1439635 1440078 . - . ID=gene-LPH58_RS06290;Name=LPH58_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06290;old_locus_tag=LPH58_06290 NZ_CP087690.1 Protein Homology CDS 1439635 1440078 . - 0 ID=cds-WP_038272488.1;Parent=gene-LPH58_RS06290;Dbxref=Genbank:WP_038272488.1;Name=WP_038272488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852772.1;locus_tag=LPH58_RS06290;product=ExbD/TolR family protein;protein_id=WP_038272488.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1440111 1440884 . - . ID=gene-LPH58_RS06295;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LPH58_RS06295;old_locus_tag=LPH58_06295 NZ_CP087690.1 Protein Homology CDS 1440111 1440884 . - 0 ID=cds-WP_038272490.1;Parent=gene-LPH58_RS06295;Dbxref=Genbank:WP_038272490.1;Name=WP_038272490.1;Ontology_term=GO:1902600,GO:0015078,GO:0005886;gbkey=CDS;gene=tolQ;go_component=plasma membrane|0005886||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410752.1;locus_tag=LPH58_RS06295;product=protein TolQ;protein_id=WP_038272490.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1440881 1441333 . - . ID=gene-LPH58_RS06300;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LPH58_RS06300;old_locus_tag=LPH58_06300 NZ_CP087690.1 Protein Homology CDS 1440881 1441333 . - 0 ID=cds-WP_038272516.1;Parent=gene-LPH58_RS06300;Dbxref=Genbank:WP_038272516.1;Name=WP_038272516.1;Ontology_term=GO:0005515,GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=protein binding|0005515||IEA,acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003472570.1;locus_tag=LPH58_RS06300;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_038272516.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1441360 1442391 . - . ID=gene-LPH58_RS06305;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LPH58_RS06305;old_locus_tag=LPH58_06305 NZ_CP087690.1 Protein Homology CDS 1441360 1442391 . - 0 ID=cds-WP_038272492.1;Parent=gene-LPH58_RS06305;Dbxref=Genbank:WP_038272492.1;Name=WP_038272492.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085423.1;locus_tag=LPH58_RS06305;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_038272492.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1442500 1444404 . - . ID=gene-LPH58_RS06310;Name=LPH58_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06310;old_locus_tag=LPH58_06310 NZ_CP087690.1 Protein Homology CDS 1442500 1444404 . - 0 ID=cds-WP_038272494.1;Parent=gene-LPH58_RS06310;Dbxref=Genbank:WP_038272494.1;Name=WP_038272494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572898.1;locus_tag=LPH58_RS06310;product=potassium transporter Kup;protein_id=WP_038272494.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1444461 1445045 . - . ID=gene-LPH58_RS06315;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LPH58_RS06315;old_locus_tag=LPH58_06315 NZ_CP087690.1 Protein Homology CDS 1444461 1445045 . - 0 ID=cds-WP_038272496.1;Parent=gene-LPH58_RS06315;Dbxref=Genbank:WP_038272496.1;Name=WP_038272496.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011258432.1;locus_tag=LPH58_RS06315;product=Holliday junction branch migration protein RuvA;protein_id=WP_038272496.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1445134 1445655 . - . ID=gene-LPH58_RS06320;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LPH58_RS06320;old_locus_tag=LPH58_06320 NZ_CP087690.1 Protein Homology CDS 1445134 1445655 . - 0 ID=cds-WP_038272498.1;Parent=gene-LPH58_RS06320;Dbxref=Genbank:WP_038272498.1;Name=WP_038272498.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction endodeoxyribonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097831.1;locus_tag=LPH58_RS06320;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_038272498.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1445760 1446494 . - . ID=gene-LPH58_RS06325;Name=LPH58_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06325;old_locus_tag=LPH58_06325 NZ_CP087690.1 Protein Homology CDS 1445760 1446494 . - 0 ID=cds-WP_038272500.1;Parent=gene-LPH58_RS06325;Dbxref=Genbank:WP_038272500.1;Name=WP_038272500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011052063.1;locus_tag=LPH58_RS06325;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_038272500.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1448375 1448854 . - . ID=gene-LPH58_RS06330;Name=LPH58_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06330;old_locus_tag=LPH58_06330 NZ_CP087690.1 Protein Homology CDS 1448375 1448854 . - 0 ID=cds-WP_081755474.1;Parent=gene-LPH58_RS06330;Dbxref=Genbank:WP_081755474.1;Name=WP_081755474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337826.1;locus_tag=LPH58_RS06330;product=DUF2726 domain-containing protein;protein_id=WP_081755474.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1449151 1449423 . - . ID=gene-LPH58_RS06335;Name=LPH58_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06335;old_locus_tag=LPH58_06335 NZ_CP087690.1 Protein Homology CDS 1449151 1449423 . - 0 ID=cds-WP_038272505.1;Parent=gene-LPH58_RS06335;Dbxref=Genbank:WP_038272505.1;Name=WP_038272505.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337777.1;locus_tag=LPH58_RS06335;product=oxidative damage protection protein;protein_id=WP_038272505.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1449458 1450507 . - . ID=gene-LPH58_RS06340;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LPH58_RS06340;old_locus_tag=LPH58_06340 NZ_CP087690.1 Protein Homology CDS 1449458 1450507 . - 0 ID=cds-WP_038272506.1;Parent=gene-LPH58_RS06340;Dbxref=Genbank:WP_038272506.1;Name=WP_038272506.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572892.1;locus_tag=LPH58_RS06340;product=A/G-specific adenine glycosylase;protein_id=WP_038272506.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1450599 1451810 . - . ID=gene-LPH58_RS06345;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LPH58_RS06345;old_locus_tag=LPH58_06345 NZ_CP087690.1 Protein Homology CDS 1450599 1451810 . - 0 ID=cds-WP_038272508.1;Parent=gene-LPH58_RS06345;Dbxref=Genbank:WP_038272508.1;Name=WP_038272508.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852793.1;locus_tag=LPH58_RS06345;product=signal recognition particle-docking protein FtsY;protein_id=WP_038272508.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1452655 1453128 . + . ID=gene-LPH58_RS06350;Name=LPH58_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06350;old_locus_tag=LPH58_06350 NZ_CP087690.1 Protein Homology CDS 1452655 1453128 . + 0 ID=cds-WP_038272510.1;Parent=gene-LPH58_RS06350;Dbxref=Genbank:WP_038272510.1;Name=WP_038272510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448491.1;locus_tag=LPH58_RS06350;product=LEA type 2 family protein;protein_id=WP_038272510.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1453404 1454018 . + . ID=gene-LPH58_RS06355;Name=LPH58_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06355;old_locus_tag=LPH58_06355 NZ_CP087690.1 Protein Homology CDS 1453404 1454018 . + 0 ID=cds-WP_081755477.1;Parent=gene-LPH58_RS06355;Dbxref=Genbank:WP_081755477.1;Name=WP_081755477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852792.1;locus_tag=LPH58_RS06355;product=HNH endonuclease;protein_id=WP_081755477.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1454602 1454778 . + . ID=gene-LPH58_RS06360;Name=LPH58_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06360;old_locus_tag=LPH58_06360 NZ_CP087690.1 Protein Homology CDS 1454602 1454778 . + 0 ID=cds-WP_230433324.1;Parent=gene-LPH58_RS06360;Dbxref=Genbank:WP_230433324.1;Name=WP_230433324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LPH58_RS06360;product=hypothetical protein;protein_id=WP_230433324.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1454837 1455181 . + . ID=gene-LPH58_RS06365;Name=LPH58_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06365;old_locus_tag=LPH58_06365 NZ_CP087690.1 Protein Homology CDS 1454837 1455181 . + 0 ID=cds-WP_038272511.1;Parent=gene-LPH58_RS06365;Dbxref=Genbank:WP_038272511.1;Name=WP_038272511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087000.1;locus_tag=LPH58_RS06365;product=DUF3653 domain-containing protein;protein_id=WP_038272511.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1455217 1455489 . - . ID=gene-LPH58_RS06370;Name=LPH58_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06370;old_locus_tag=LPH58_06370 NZ_CP087690.1 Protein Homology CDS 1455217 1455489 . - 0 ID=cds-WP_038272512.1;Parent=gene-LPH58_RS06370;Dbxref=Genbank:WP_038272512.1;Name=WP_038272512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000615979.1;locus_tag=LPH58_RS06370;product=type II toxin-antitoxin system mRNA interferase toxin%2C RelE/StbE family;protein_id=WP_038272512.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1455489 1455749 . - . ID=gene-LPH58_RS06375;Name=LPH58_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06375;old_locus_tag=LPH58_06375 NZ_CP087690.1 Protein Homology CDS 1455489 1455749 . - 0 ID=cds-WP_038272513.1;Parent=gene-LPH58_RS06375;Dbxref=Genbank:WP_038272513.1;Name=WP_038272513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729703.1;locus_tag=LPH58_RS06375;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_038272513.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1455838 1456965 . - . ID=gene-LPH58_RS06380;Name=LPH58_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06380;old_locus_tag=LPH58_06380 NZ_CP087690.1 Protein Homology CDS 1455838 1456965 . - 0 ID=cds-WP_114867127.1-2;Parent=gene-LPH58_RS06380;Dbxref=Genbank:WP_114867127.1;Name=WP_114867127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH58_RS06380;product=hypothetical protein;protein_id=WP_114867127.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1456978 1457322 . - . ID=gene-LPH58_RS06385;Name=LPH58_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06385;old_locus_tag=LPH58_06385 NZ_CP087690.1 Protein Homology CDS 1456978 1457322 . - 0 ID=cds-WP_038273069.1-2;Parent=gene-LPH58_RS06385;Dbxref=Genbank:WP_038273069.1;Name=WP_038273069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH58_RS06385;product=DUF2523 family protein;protein_id=WP_038273069.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1457325 1458710 . - . ID=gene-LPH58_RS06390;Name=LPH58_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06390;old_locus_tag=LPH58_06390 NZ_CP087690.1 Protein Homology CDS 1457325 1458710 . - 0 ID=cds-WP_230428213.1-2;Parent=gene-LPH58_RS06390;Dbxref=Genbank:WP_230428213.1;Name=WP_230428213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097844.1;locus_tag=LPH58_RS06390;product=furin-like repeat-containing protein;protein_id=WP_230428213.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1458890 1459126 . - . ID=gene-LPH58_RS06395;Name=LPH58_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06395;old_locus_tag=LPH58_06395 NZ_CP087690.1 Protein Homology CDS 1458890 1459126 . - 0 ID=cds-WP_230428212.1-2;Parent=gene-LPH58_RS06395;Dbxref=Genbank:WP_230428212.1;Name=WP_230428212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382572.1;locus_tag=LPH58_RS06395;product=major capsid protein;protein_id=WP_230428212.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1459135 1459341 . - . ID=gene-LPH58_RS06400;Name=LPH58_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06400;old_locus_tag=LPH58_06400 NZ_CP087690.1 Protein Homology CDS 1459135 1459341 . - 0 ID=cds-WP_038273075.1-2;Parent=gene-LPH58_RS06400;Dbxref=Genbank:WP_038273075.1;Name=WP_038273075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH58_RS06400;product=hypothetical protein;protein_id=WP_038273075.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1459344 1459658 . - . ID=gene-LPH58_RS06405;Name=LPH58_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06405;old_locus_tag=LPH58_06405 NZ_CP087690.1 Protein Homology CDS 1459344 1459658 . - 0 ID=cds-WP_230428211.1-2;Parent=gene-LPH58_RS06405;Dbxref=Genbank:WP_230428211.1;Name=WP_230428211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003474436.1;locus_tag=LPH58_RS06405;product=hypothetical protein;protein_id=WP_230428211.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1459934 1460521 . - . ID=gene-LPH58_RS06410;Name=LPH58_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06410;old_locus_tag=LPH58_06410 NZ_CP087690.1 Protein Homology CDS 1459934 1460521 . - 0 ID=cds-WP_038273076.1-2;Parent=gene-LPH58_RS06410;Dbxref=Genbank:WP_038273076.1;Name=WP_038273076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894347.1;locus_tag=LPH58_RS06410;product=hypothetical protein;protein_id=WP_038273076.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1460718 1460861 . - . ID=gene-LPH58_RS06415;Name=LPH58_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06415;old_locus_tag=LPH58_06415 NZ_CP087690.1 GeneMarkS-2+ CDS 1460718 1460861 . - 0 ID=cds-WP_160165233.1-2;Parent=gene-LPH58_RS06415;Dbxref=Genbank:WP_160165233.1;Name=WP_160165233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06415;product=hypothetical protein;protein_id=WP_160165233.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1460981 1461181 . - . ID=gene-LPH58_RS06420;Name=LPH58_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06420;old_locus_tag=LPH58_06420 NZ_CP087690.1 Protein Homology CDS 1460981 1461181 . - 0 ID=cds-WP_038273077.1-2;Parent=gene-LPH58_RS06420;Dbxref=Genbank:WP_038273077.1;Name=WP_038273077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH58_RS06420;product=hypothetical protein;protein_id=WP_038273077.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1461230 1461493 . - . ID=gene-LPH58_RS06425;Name=LPH58_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06425;old_locus_tag=LPH58_06425 NZ_CP087690.1 GeneMarkS-2+ CDS 1461230 1461493 . - 0 ID=cds-WP_162814095.1-2;Parent=gene-LPH58_RS06425;Dbxref=Genbank:WP_162814095.1;Name=WP_162814095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06425;product=hypothetical protein;protein_id=WP_162814095.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1461497 1461658 . - . ID=gene-LPH58_RS06430;Name=LPH58_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06430;old_locus_tag=LPH58_06430 NZ_CP087690.1 GeneMarkS-2+ CDS 1461497 1461658 . - 0 ID=cds-WP_160165236.1;Parent=gene-LPH58_RS06430;Dbxref=Genbank:WP_160165236.1;Name=WP_160165236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06430;product=hypothetical protein;protein_id=WP_160165236.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1461948 1462277 . + . ID=gene-LPH58_RS06435;Name=LPH58_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06435;old_locus_tag=LPH58_06435 NZ_CP087690.1 Protein Homology CDS 1461948 1462277 . + 0 ID=cds-WP_230428286.1;Parent=gene-LPH58_RS06435;Dbxref=Genbank:WP_230428286.1;Name=WP_230428286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023888.2;locus_tag=LPH58_RS06435;product=DUF3693 domain-containing protein;protein_id=WP_230428286.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1462366 1462866 . - . ID=gene-LPH58_RS06440;Name=LPH58_RS06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06440;old_locus_tag=LPH58_06440;partial=true;pseudo=true;start_range=.,1462366 NZ_CP087690.1 Protein Homology CDS 1462366 1462866 . - 0 ID=cds-LPH58_RS06440;Parent=gene-LPH58_RS06440;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.2;locus_tag=LPH58_RS06440;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;start_range=.,1462366;transl_table=11 NZ_CP087690.1 RefSeq gene 1463314 1463535 . + . ID=gene-LPH58_RS06445;Name=LPH58_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06445;old_locus_tag=LPH58_06445 NZ_CP087690.1 Protein Homology CDS 1463314 1463535 . + 0 ID=cds-WP_038273164.1;Parent=gene-LPH58_RS06445;Dbxref=Genbank:WP_038273164.1;Name=WP_038273164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894329.1;locus_tag=LPH58_RS06445;product=antitoxin MazE family protein;protein_id=WP_038273164.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1463532 1463855 . + . ID=gene-LPH58_RS06450;Name=LPH58_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06450;old_locus_tag=LPH58_06450 NZ_CP087690.1 Protein Homology CDS 1463532 1463855 . + 0 ID=cds-WP_038273166.1;Parent=gene-LPH58_RS06450;Dbxref=Genbank:WP_038273166.1;Name=WP_038273166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159824.1;locus_tag=LPH58_RS06450;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_038273166.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1463956 1465104 . - . ID=gene-LPH58_RS06455;Name=LPH58_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06455;old_locus_tag=LPH58_06455 NZ_CP087690.1 Protein Homology CDS 1463956 1465104 . - 0 ID=cds-WP_069636227.1-2;Parent=gene-LPH58_RS06455;Dbxref=Genbank:WP_069636227.1;Name=WP_069636227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382577.1;locus_tag=LPH58_RS06455;product=hypothetical protein;protein_id=WP_069636227.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1465104 1465445 . - . ID=gene-LPH58_RS06460;Name=LPH58_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06460;old_locus_tag=LPH58_06460 NZ_CP087690.1 Protein Homology CDS 1465104 1465445 . - 0 ID=cds-WP_038273089.1-2;Parent=gene-LPH58_RS06460;Dbxref=Genbank:WP_038273089.1;Name=WP_038273089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097845.1;locus_tag=LPH58_RS06460;product=DUF2523 family protein;protein_id=WP_038273089.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1465449 1466516 . - . ID=gene-LPH58_RS06465;Name=LPH58_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06465;old_locus_tag=LPH58_06465 NZ_CP087690.1 Protein Homology CDS 1465449 1466516 . - 0 ID=cds-WP_152536670.1-2;Parent=gene-LPH58_RS06465;Dbxref=Genbank:WP_152536670.1;Name=WP_152536670.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041109.1;locus_tag=LPH58_RS06465;product=virulence factor TspB C-terminal domain-related protein;protein_id=WP_152536670.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1466984 1467202 . - . ID=gene-LPH58_RS06470;Name=LPH58_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06470;old_locus_tag=LPH58_06470 NZ_CP087690.1 Protein Homology CDS 1466984 1467202 . - 0 ID=cds-WP_051482398.1-2;Parent=gene-LPH58_RS06470;Dbxref=Genbank:WP_051482398.1;Name=WP_051482398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017194.2;locus_tag=LPH58_RS06470;product=major capsid protein;protein_id=WP_051482398.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1467211 1467420 . - . ID=gene-LPH58_RS06475;Name=LPH58_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06475;old_locus_tag=LPH58_06475 NZ_CP087690.1 Protein Homology CDS 1467211 1467420 . - 0 ID=cds-WP_230428208.1-2;Parent=gene-LPH58_RS06475;Dbxref=Genbank:WP_230428208.1;Name=WP_230428208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382571.1;locus_tag=LPH58_RS06475;product=hypothetical protein;protein_id=WP_230428208.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1467420 1467713 . - . ID=gene-LPH58_RS06480;Name=LPH58_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06480;old_locus_tag=LPH58_06480 NZ_CP087690.1 Protein Homology CDS 1467420 1467713 . - 0 ID=cds-WP_038273093.1-2;Parent=gene-LPH58_RS06480;Dbxref=Genbank:WP_038273093.1;Name=WP_038273093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097860.1;locus_tag=LPH58_RS06480;product=single-stranded DNA-binding protein;protein_id=WP_038273093.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1467759 1468907 . - . ID=gene-LPH58_RS06485;Name=LPH58_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06485;old_locus_tag=LPH58_06485 NZ_CP087690.1 Protein Homology CDS 1467759 1468907 . - 0 ID=cds-WP_038273097.1-2;Parent=gene-LPH58_RS06485;Dbxref=Genbank:WP_038273097.1;Name=WP_038273097.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853102.1;locus_tag=LPH58_RS06485;product=replication initiation factor domain-containing protein;protein_id=WP_038273097.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1469338 1469520 . - . ID=gene-LPH58_RS06490;Name=LPH58_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06490;old_locus_tag=LPH58_06490 NZ_CP087690.1 Protein Homology CDS 1469338 1469520 . - 0 ID=cds-WP_114867130.1;Parent=gene-LPH58_RS06490;Dbxref=Genbank:WP_114867130.1;Name=WP_114867130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853101.1;locus_tag=LPH58_RS06490;product=hypothetical protein;protein_id=WP_114867130.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1469551 1469775 . - . ID=gene-LPH58_RS06495;Name=LPH58_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06495;old_locus_tag=LPH58_06495 NZ_CP087690.1 GeneMarkS-2+ CDS 1469551 1469775 . - 0 ID=cds-WP_160199341.1;Parent=gene-LPH58_RS06495;Dbxref=Genbank:WP_160199341.1;Name=WP_160199341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06495;product=hypothetical protein;protein_id=WP_160199341.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1470274 1470349 . - . ID=gene-LPH58_RS06500;Name=LPH58_RS06500;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS06500;old_locus_tag=LPH58_06500 NZ_CP087690.1 tRNAscan-SE tRNA 1470274 1470349 . - . ID=rna-LPH58_RS06500;Parent=gene-LPH58_RS06500;anticodon=(pos:complement(1470314..1470316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS06500;product=tRNA-Lys NZ_CP087690.1 tRNAscan-SE exon 1470274 1470349 . - . ID=exon-LPH58_RS06500-1;Parent=rna-LPH58_RS06500;anticodon=(pos:complement(1470314..1470316));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS06500;product=tRNA-Lys NZ_CP087690.1 RefSeq gene 1470422 1471090 . - . ID=gene-LPH58_RS06505;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LPH58_RS06505;old_locus_tag=LPH58_06505 NZ_CP087690.1 Protein Homology CDS 1470422 1471090 . - 0 ID=cds-WP_038271631.1;Parent=gene-LPH58_RS06505;Dbxref=Genbank:WP_038271631.1;Name=WP_038271631.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894324.1;locus_tag=LPH58_RS06505;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_038271631.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1471945 1473714 . + . ID=gene-LPH58_RS06510;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LPH58_RS06510;old_locus_tag=LPH58_06510 NZ_CP087690.1 Protein Homology CDS 1471945 1473714 . + 0 ID=cds-WP_038271663.1;Parent=gene-LPH58_RS06510;Dbxref=Genbank:WP_038271663.1;Name=WP_038271663.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089732.1;locus_tag=LPH58_RS06510;product=aspartate--tRNA ligase;protein_id=WP_038271663.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1474036 1474863 . - . ID=gene-LPH58_RS06515;Name=LPH58_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06515;old_locus_tag=LPH58_06515 NZ_CP087690.1 Protein Homology CDS 1474036 1474863 . - 0 ID=cds-WP_038271629.1;Parent=gene-LPH58_RS06515;Dbxref=Genbank:WP_038271629.1;Name=WP_038271629.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005395.0;locus_tag=LPH58_RS06515;product=SDR family oxidoreductase;protein_id=WP_038271629.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1475008 1475300 . + . ID=gene-LPH58_RS06520;Name=LPH58_RS06520;end_range=1475300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06520;old_locus_tag=LPH58_06520;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 1475008 1475300 . + 0 ID=cds-LPH58_RS06520;Parent=gene-LPH58_RS06520;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1475300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015648284.1;locus_tag=LPH58_RS06520;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1475327 1476506 . + . ID=gene-LPH58_RS06525;Name=LPH58_RS06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06525;old_locus_tag=LPH58_06525;partial=true;pseudo=true;start_range=.,1475327 NZ_CP087690.1 Protein Homology CDS 1475327 1476506 . + 0 ID=cds-LPH58_RS06525;Parent=gene-LPH58_RS06525;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=transposition%2C DNA-mediated|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1;locus_tag=LPH58_RS06525;partial=true;product=Tn3 family transposase;pseudo=true;start_range=.,1475327;transl_table=11 NZ_CP087690.1 RefSeq gene 1476550 1478067 . - . ID=gene-LPH58_RS06530;Name=LPH58_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06530;old_locus_tag=LPH58_06530 NZ_CP087690.1 Protein Homology CDS 1476550 1478067 . - 0 ID=cds-WP_038271625.1;Parent=gene-LPH58_RS06530;Dbxref=Genbank:WP_038271625.1;Name=WP_038271625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003483539.1;locus_tag=LPH58_RS06530;product=fumarate hydratase;protein_id=WP_038271625.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1478078 1478323 . - . ID=gene-LPH58_RS06535;Name=LPH58_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06535;old_locus_tag=LPH58_06535 NZ_CP087690.1 GeneMarkS-2+ CDS 1478078 1478323 . - 0 ID=cds-WP_038271623.1;Parent=gene-LPH58_RS06535;Dbxref=Genbank:WP_038271623.1;Name=WP_038271623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06535;product=hypothetical protein;protein_id=WP_038271623.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1479389 1480972 . - . ID=gene-LPH58_RS06540;Name=LPH58_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06540;old_locus_tag=LPH58_06540 NZ_CP087690.1 Protein Homology CDS 1479389 1480972 . - 0 ID=cds-WP_038271621.1;Parent=gene-LPH58_RS06540;Dbxref=Genbank:WP_038271621.1;Name=WP_038271621.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085579.1;locus_tag=LPH58_RS06540;product=S41 family peptidase;protein_id=WP_038271621.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1482540 1483319 . + . ID=gene-LPH58_RS06545;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LPH58_RS06545;old_locus_tag=LPH58_06545 NZ_CP087690.1 Protein Homology CDS 1482540 1483319 . + 0 ID=cds-WP_038271660.1;Parent=gene-LPH58_RS06545;Dbxref=Genbank:WP_038271660.1;Name=WP_038271660.1;Ontology_term=GO:0006281,GO:0008853;gbkey=CDS;gene=xth;go_function=exodeoxyribonuclease III activity|0008853||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901808.1;locus_tag=LPH58_RS06545;product=exodeoxyribonuclease III;protein_id=WP_038271660.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1483650 1484258 . + . ID=gene-LPH58_RS06550;Name=LPH58_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06550;old_locus_tag=LPH58_06550 NZ_CP087690.1 Protein Homology CDS 1483650 1484258 . + 0 ID=cds-WP_038271618.1;Parent=gene-LPH58_RS06550;Dbxref=Genbank:WP_038271618.1;Name=WP_038271618.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972828.1;locus_tag=LPH58_RS06550;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_038271618.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1484470 1485108 . + . ID=gene-LPH58_RS06555;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LPH58_RS06555;old_locus_tag=LPH58_06555 NZ_CP087690.1 Protein Homology CDS 1484470 1485108 . + 0 ID=cds-WP_038271616.1;Parent=gene-LPH58_RS06555;Dbxref=Genbank:WP_038271616.1;Name=WP_038271616.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914596.1;locus_tag=LPH58_RS06555;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_038271616.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1485179 1487179 . - . ID=gene-LPH58_RS06560;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LPH58_RS06560;old_locus_tag=LPH58_06560 NZ_CP087690.1 Protein Homology CDS 1485179 1487179 . - 0 ID=cds-WP_038271614.1;Parent=gene-LPH58_RS06560;Dbxref=Genbank:WP_038271614.1;Name=WP_038271614.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348449.1;locus_tag=LPH58_RS06560;product=transketolase;protein_id=WP_038271614.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1487285 1488565 . - . ID=gene-LPH58_RS06565;Name=LPH58_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06565;old_locus_tag=LPH58_06565 NZ_CP087690.1 Protein Homology CDS 1487285 1488565 . - 0 ID=cds-WP_081755459.1;Parent=gene-LPH58_RS06565;Dbxref=Genbank:WP_081755459.1;Name=WP_081755459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851384.1;locus_tag=LPH58_RS06565;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_081755459.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1488830 1488934 . + . ID=gene-LPH58_RS06570;Name=LPH58_RS06570;end_range=1488934,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06570;old_locus_tag=LPH58_06570;partial=true;pseudo=true;start_range=.,1488830 NZ_CP087690.1 Protein Homology CDS 1488830 1488934 . + 0 ID=cds-LPH58_RS06570;Parent=gene-LPH58_RS06570;Note=maintains the balance of metabolites in the pentose-phosphate pathway%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1488934,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012479209.1;locus_tag=LPH58_RS06570;partial=true;product=transaldolase;pseudo=true;start_range=.,1488830;transl_table=11 NZ_CP087690.1 RefSeq gene 1489069 1489719 . - . ID=gene-LPH58_RS06575;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LPH58_RS06575;old_locus_tag=LPH58_06575 NZ_CP087690.1 Protein Homology CDS 1489069 1489719 . - 0 ID=cds-WP_038271658.1;Parent=gene-LPH58_RS06575;Dbxref=Genbank:WP_038271658.1;Name=WP_038271658.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009577520.1;locus_tag=LPH58_RS06575;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_038271658.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1489832 1490326 . - . ID=gene-LPH58_RS06580;Name=LPH58_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06580;old_locus_tag=LPH58_06580 NZ_CP087690.1 Protein Homology CDS 1489832 1490326 . - 0 ID=cds-WP_038271655.1;Parent=gene-LPH58_RS06580;Dbxref=Genbank:WP_038271655.1;Name=WP_038271655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085447.1;locus_tag=LPH58_RS06580;product=SgcJ/EcaC family oxidoreductase;protein_id=WP_038271655.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1491790 1492182 . + . ID=gene-LPH58_RS06585;Name=LPH58_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06585;old_locus_tag=LPH58_06585 NZ_CP087690.1 Protein Homology CDS 1491790 1492182 . + 0 ID=cds-WP_038271652.1;Parent=gene-LPH58_RS06585;Dbxref=Genbank:WP_038271652.1;Name=WP_038271652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014502532.1;locus_tag=LPH58_RS06585;product=HU family DNA-binding protein;protein_id=WP_038271652.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1493579 1495738 . + . ID=gene-LPH58_RS06590;Name=dcp;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=LPH58_RS06590;old_locus_tag=LPH58_06590 NZ_CP087690.1 Protein Homology CDS 1493579 1495738 . + 0 ID=cds-WP_038271650.1;Parent=gene-LPH58_RS06590;Dbxref=Genbank:WP_038271650.1;Name=WP_038271650.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=dcp;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008266515.1;locus_tag=LPH58_RS06590;product=peptidyl-dipeptidase Dcp;protein_id=WP_038271650.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1495824 1496231 . - . ID=gene-LPH58_RS06595;Name=LPH58_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06595;old_locus_tag=LPH58_06595 NZ_CP087690.1 Protein Homology CDS 1495824 1496231 . - 0 ID=cds-WP_230428287.1;Parent=gene-LPH58_RS06595;Dbxref=Genbank:WP_230428287.1;Name=WP_230428287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894407.1;locus_tag=LPH58_RS06595;product=VirK family protein;protein_id=WP_230428287.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1497266 1498564 . + . ID=gene-LPH58_RS06600;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LPH58_RS06600;old_locus_tag=LPH58_06600 NZ_CP087690.1 Protein Homology CDS 1497266 1498564 . + 0 ID=cds-WP_038271605.1;Parent=gene-LPH58_RS06600;Dbxref=Genbank:WP_038271605.1;Name=WP_038271605.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085450.1;locus_tag=LPH58_RS06600;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_038271605.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1498603 1499607 . + . ID=gene-LPH58_RS06605;Name=LPH58_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06605;old_locus_tag=LPH58_06605 NZ_CP087690.1 Protein Homology CDS 1498603 1499607 . + 0 ID=cds-WP_038271603.1;Parent=gene-LPH58_RS06605;Dbxref=Genbank:WP_038271603.1;Name=WP_038271603.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019301876.1;locus_tag=LPH58_RS06605;product=SPOR domain-containing protein;protein_id=WP_038271603.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1499684 1500217 . + . ID=gene-LPH58_RS06610;Name=LPH58_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06610;old_locus_tag=LPH58_06610 NZ_CP087690.1 Protein Homology CDS 1499684 1500217 . + 0 ID=cds-WP_081755458.1;Parent=gene-LPH58_RS06610;Dbxref=Genbank:WP_081755458.1;Name=WP_081755458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894410.1;locus_tag=LPH58_RS06610;product=CvpA family protein;protein_id=WP_081755458.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1500360 1501817 . + . ID=gene-LPH58_RS06615;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LPH58_RS06615;old_locus_tag=LPH58_06615 NZ_CP087690.1 Protein Homology CDS 1500360 1501817 . + 0 ID=cds-WP_038271601.1;Parent=gene-LPH58_RS06615;Dbxref=Genbank:WP_038271601.1;Name=WP_038271601.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085453.1;locus_tag=LPH58_RS06615;product=amidophosphoribosyltransferase;protein_id=WP_038271601.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1502544 1503056 . - . ID=gene-LPH58_RS06620;Name=LPH58_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06620;old_locus_tag=LPH58_06620 NZ_CP087690.1 Protein Homology CDS 1502544 1503056 . - 0 ID=cds-WP_051482345.1;Parent=gene-LPH58_RS06620;Dbxref=Genbank:WP_051482345.1;Name=WP_051482345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085454.1;locus_tag=LPH58_RS06620;product=chemotaxis protein CheW;protein_id=WP_051482345.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1503078 1504283 . - . ID=gene-LPH58_RS06625;Name=LPH58_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06625;old_locus_tag=LPH58_06625 NZ_CP087690.1 Protein Homology CDS 1503078 1504283 . - 0 ID=cds-WP_038271598.1;Parent=gene-LPH58_RS06625;Dbxref=Genbank:WP_038271598.1;Name=WP_038271598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852974.1;locus_tag=LPH58_RS06625;product=glutamate methyltransferase;protein_id=WP_038271598.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1504270 1509528 . - . ID=gene-LPH58_RS06630;Name=LPH58_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06630;old_locus_tag=LPH58_06630 NZ_CP087690.1 Protein Homology CDS 1504270 1509528 . - 0 ID=cds-WP_038271596.1;Parent=gene-LPH58_RS06630;Dbxref=Genbank:WP_038271596.1;Name=WP_038271596.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572849.1;locus_tag=LPH58_RS06630;product=Hpt domain-containing protein;protein_id=WP_038271596.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1509635 1511677 . - . ID=gene-LPH58_RS06635;Name=LPH58_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06635;old_locus_tag=LPH58_06635 NZ_CP087690.1 Protein Homology CDS 1509635 1511677 . - 0 ID=cds-WP_038271594.1;Parent=gene-LPH58_RS06635;Dbxref=Genbank:WP_038271594.1;Name=WP_038271594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005988635.1;locus_tag=LPH58_RS06635;product=methyl-accepting chemotaxis protein;protein_id=WP_038271594.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1511717 1512247 . - . ID=gene-LPH58_RS06640;Name=LPH58_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06640;old_locus_tag=LPH58_06640 NZ_CP087690.1 Protein Homology CDS 1511717 1512247 . - 0 ID=cds-WP_038271592.1;Parent=gene-LPH58_RS06640;Dbxref=Genbank:WP_038271592.1;Name=WP_038271592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508568.1;locus_tag=LPH58_RS06640;product=chemotaxis protein CheW;protein_id=WP_038271592.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1512264 1512680 . - . ID=gene-LPH58_RS06645;Name=LPH58_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06645;old_locus_tag=LPH58_06645 NZ_CP087690.1 Protein Homology CDS 1512264 1512680 . - 0 ID=cds-WP_038271642.1;Parent=gene-LPH58_RS06645;Dbxref=Genbank:WP_038271642.1;Name=WP_038271642.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085459.1;locus_tag=LPH58_RS06645;product=response regulator;protein_id=WP_038271642.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1512950 1513894 . + . ID=gene-LPH58_RS06650;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LPH58_RS06650;old_locus_tag=LPH58_06650 NZ_CP087690.1 Protein Homology CDS 1512950 1513894 . + 0 ID=cds-WP_038271589.1;Parent=gene-LPH58_RS06650;Dbxref=Genbank:WP_038271589.1;Name=WP_038271589.1;Ontology_term=GO:0006750,GO:0004363;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894415.1;locus_tag=LPH58_RS06650;product=glutathione synthase;protein_id=WP_038271589.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1513896 1514771 . + . ID=gene-LPH58_RS06655;Name=LPH58_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06655;old_locus_tag=LPH58_06655 NZ_CP087690.1 Protein Homology CDS 1513896 1514771 . + 0 ID=cds-WP_038271586.1;Parent=gene-LPH58_RS06655;Dbxref=Genbank:WP_038271586.1;Name=WP_038271586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382557.1;locus_tag=LPH58_RS06655;product=energy transducer TonB;protein_id=WP_038271586.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1515155 1515964 . + . ID=gene-LPH58_RS06660;Name=LPH58_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06660;old_locus_tag=LPH58_06660 NZ_CP087690.1 Protein Homology CDS 1515155 1515964 . + 0 ID=cds-WP_038271584.1;Parent=gene-LPH58_RS06660;Dbxref=Genbank:WP_038271584.1;Name=WP_038271584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097814.1;locus_tag=LPH58_RS06660;product=DUF6216 family protein;protein_id=WP_038271584.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1516675 1518831 . - . ID=gene-LPH58_RS06665;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LPH58_RS06665;old_locus_tag=LPH58_06665 NZ_CP087690.1 Protein Homology CDS 1516675 1518831 . - 0 ID=cds-WP_038271582.1;Parent=gene-LPH58_RS06665;Dbxref=Genbank:WP_038271582.1;Name=WP_038271582.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039155.1;locus_tag=LPH58_RS06665;product=glycine--tRNA ligase subunit beta;protein_id=WP_038271582.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1518922 1519845 . - . ID=gene-LPH58_RS06670;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LPH58_RS06670;old_locus_tag=LPH58_06670 NZ_CP087690.1 Protein Homology CDS 1518922 1519845 . - 0 ID=cds-WP_038271580.1;Parent=gene-LPH58_RS06670;Dbxref=Genbank:WP_038271580.1;Name=WP_038271580.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156064.1;locus_tag=LPH58_RS06670;product=glycine--tRNA ligase subunit alpha;protein_id=WP_038271580.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1520182 1521819 . - . ID=gene-LPH58_RS06675;Name=LPH58_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06675;old_locus_tag=LPH58_06675 NZ_CP087690.1 Protein Homology CDS 1520182 1521819 . - 0 ID=cds-WP_038271579.1;Parent=gene-LPH58_RS06675;Dbxref=Genbank:WP_038271579.1;Name=WP_038271579.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337819.1;locus_tag=LPH58_RS06675;product=NAD+ synthase;protein_id=WP_038271579.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1522365 1522784 . - . ID=gene-LPH58_RS06680;Name=LPH58_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06680;old_locus_tag=LPH58_06680 NZ_CP087690.1 GeneMarkS-2+ CDS 1522365 1522784 . - 0 ID=cds-WP_152536638.1;Parent=gene-LPH58_RS06680;Dbxref=Genbank:WP_152536638.1;Name=WP_152536638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06680;product=hypothetical protein;protein_id=WP_152536638.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1522729 1523067 . - . ID=gene-LPH58_RS06685;Name=LPH58_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06685;old_locus_tag=LPH58_06685 NZ_CP087690.1 GeneMarkS-2+ CDS 1522729 1523067 . - 0 ID=cds-WP_152536637.1;Parent=gene-LPH58_RS06685;Dbxref=Genbank:WP_152536637.1;Name=WP_152536637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06685;product=hypothetical protein;protein_id=WP_152536637.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1523046 1523210 . - . ID=gene-LPH58_RS06690;Name=LPH58_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06690;old_locus_tag=LPH58_06690 NZ_CP087690.1 GeneMarkS-2+ CDS 1523046 1523210 . - 0 ID=cds-WP_160165193.1;Parent=gene-LPH58_RS06690;Dbxref=Genbank:WP_160165193.1;Name=WP_160165193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06690;product=hypothetical protein;protein_id=WP_160165193.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1523221 1523376 . - . ID=gene-LPH58_RS06695;Name=LPH58_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06695;old_locus_tag=LPH58_06695 NZ_CP087690.1 GeneMarkS-2+ CDS 1523221 1523376 . - 0 ID=cds-WP_160165192.1;Parent=gene-LPH58_RS06695;Dbxref=Genbank:WP_160165192.1;Name=WP_160165192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06695;product=hypothetical protein;protein_id=WP_160165192.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1523552 1523935 . + . ID=gene-LPH58_RS06700;Name=LPH58_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06700;old_locus_tag=LPH58_06700 NZ_CP087690.1 Protein Homology CDS 1523552 1523935 . + 0 ID=cds-WP_038271578.1;Parent=gene-LPH58_RS06700;Dbxref=Genbank:WP_038271578.1;Name=WP_038271578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894423.1;locus_tag=LPH58_RS06700;product=YkgJ family cysteine cluster protein;protein_id=WP_038271578.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1524134 1524355 . - . ID=gene-LPH58_RS06705;Name=LPH58_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06705;old_locus_tag=LPH58_06705 NZ_CP087690.1 GeneMarkS-2+ CDS 1524134 1524355 . - 0 ID=cds-WP_152536635.1;Parent=gene-LPH58_RS06705;Dbxref=Genbank:WP_152536635.1;Name=WP_152536635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06705;product=hypothetical protein;protein_id=WP_152536635.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1524577 1525488 . - . ID=gene-LPH58_RS06710;Name=LPH58_RS06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06710;old_locus_tag=LPH58_06710 NZ_CP087690.1 Protein Homology CDS 1524577 1525488 . - 0 ID=cds-WP_038271576.1;Parent=gene-LPH58_RS06710;Dbxref=Genbank:WP_038271576.1;Name=WP_038271576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004572841.1;locus_tag=LPH58_RS06710;product=alpha/beta fold hydrolase;protein_id=WP_038271576.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1525485 1526384 . - . ID=gene-LPH58_RS06715;Name=LPH58_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06715;old_locus_tag=LPH58_06715 NZ_CP087690.1 GeneMarkS-2+ CDS 1525485 1526384 . - 0 ID=cds-WP_081755457.1;Parent=gene-LPH58_RS06715;Dbxref=Genbank:WP_081755457.1;Name=WP_081755457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06715;product=hypothetical protein;protein_id=WP_081755457.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1526447 1527463 . - . ID=gene-LPH58_RS06720;Name=LPH58_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06720;old_locus_tag=LPH58_06720 NZ_CP087690.1 Protein Homology CDS 1526447 1527463 . - 0 ID=cds-WP_038271575.1;Parent=gene-LPH58_RS06720;Dbxref=Genbank:WP_038271575.1;Name=WP_038271575.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002809874.1;locus_tag=LPH58_RS06720;product=3-oxoacyl-ACP synthase III;protein_id=WP_038271575.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1527570 1527890 . - . ID=gene-LPH58_RS06725;Name=LPH58_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06725;old_locus_tag=LPH58_06725 NZ_CP087690.1 Protein Homology CDS 1527570 1527890 . - 0 ID=cds-WP_038271574.1;Parent=gene-LPH58_RS06725;Dbxref=Genbank:WP_038271574.1;Name=WP_038271574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488921.1;locus_tag=LPH58_RS06725;product=DUF4156 domain-containing protein;protein_id=WP_038271574.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1528167 1528667 . + . ID=gene-LPH58_RS06730;Name=LPH58_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06730;old_locus_tag=LPH58_06730 NZ_CP087690.1 Protein Homology CDS 1528167 1528667 . + 0 ID=cds-WP_038271638.1;Parent=gene-LPH58_RS06730;Dbxref=Genbank:WP_038271638.1;Name=WP_038271638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085473.1;locus_tag=LPH58_RS06730;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_038271638.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1528859 1529140 . - . ID=gene-LPH58_RS06735;Name=LPH58_RS06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06735;old_locus_tag=LPH58_06735 NZ_CP087690.1 GeneMarkS-2+ CDS 1528859 1529140 . - 0 ID=cds-WP_152536634.1;Parent=gene-LPH58_RS06735;Dbxref=Genbank:WP_152536634.1;Name=WP_152536634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06735;product=hypothetical protein;protein_id=WP_152536634.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1529897 1531480 . + . ID=gene-LPH58_RS06740;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LPH58_RS06740;old_locus_tag=LPH58_06740 NZ_CP087690.1 Protein Homology CDS 1529897 1531480 . + 0 ID=cds-WP_038271569.1;Parent=gene-LPH58_RS06740;Dbxref=Genbank:WP_038271569.1;Name=WP_038271569.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302295.1;locus_tag=LPH58_RS06740;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_038271569.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1532378 1533667 . + . ID=gene-LPH58_RS06745;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LPH58_RS06745;old_locus_tag=LPH58_06745 NZ_CP087690.1 Protein Homology CDS 1532378 1533667 . + 0 ID=cds-WP_038271566.1;Parent=gene-LPH58_RS06745;Dbxref=Genbank:WP_038271566.1;Name=WP_038271566.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346194.1;locus_tag=LPH58_RS06745;product=phosphoribosylamine--glycine ligase;protein_id=WP_038271566.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1533769 1533999 . - . ID=gene-LPH58_RS06750;Name=LPH58_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06750;old_locus_tag=LPH58_06750 NZ_CP087690.1 GeneMarkS-2+ CDS 1533769 1533999 . - 0 ID=cds-WP_152536633.1;Parent=gene-LPH58_RS06750;Dbxref=Genbank:WP_152536633.1;Name=WP_152536633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06750;product=hypothetical protein;protein_id=WP_152536633.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1534119 1534247 . - . ID=gene-LPH58_RS11965;Name=LPH58_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11965 NZ_CP087690.1 GeneMarkS-2+ CDS 1534119 1534247 . - 0 ID=cds-WP_267903149.1;Parent=gene-LPH58_RS11965;Dbxref=Genbank:WP_267903149.1;Name=WP_267903149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11965;product=hypothetical protein;protein_id=WP_267903149.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1534305 1535081 . + . ID=gene-LPH58_RS06755;Name=LPH58_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06755;old_locus_tag=LPH58_06755 NZ_CP087690.1 GeneMarkS-2+ CDS 1534305 1535081 . + 0 ID=cds-WP_152536632.1;Parent=gene-LPH58_RS06755;Dbxref=Genbank:WP_152536632.1;Name=WP_152536632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06755;product=hypothetical protein;protein_id=WP_152536632.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1535078 1535665 . + . ID=gene-LPH58_RS06760;Name=LPH58_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06760;old_locus_tag=LPH58_06760 NZ_CP087690.1 GeneMarkS-2+ CDS 1535078 1535665 . + 0 ID=cds-WP_152536631.1;Parent=gene-LPH58_RS06760;Dbxref=Genbank:WP_152536631.1;Name=WP_152536631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06760;product=hypothetical protein;protein_id=WP_152536631.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1535752 1537881 . + . ID=gene-LPH58_RS06765;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=LPH58_RS06765;old_locus_tag=LPH58_06765 NZ_CP087690.1 Protein Homology CDS 1535752 1537881 . + 0 ID=cds-WP_230428288.1;Parent=gene-LPH58_RS06765;Dbxref=Genbank:WP_230428288.1;Name=WP_230428288.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607717.1;locus_tag=LPH58_RS06765;product=YccS family putative transporter;protein_id=WP_230428288.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1538954 1539271 . - . ID=gene-LPH58_RS06770;Name=LPH58_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06770;old_locus_tag=LPH58_06770 NZ_CP087690.1 Protein Homology CDS 1538954 1539271 . - 0 ID=cds-WP_051482342.1;Parent=gene-LPH58_RS06770;Dbxref=Genbank:WP_051482342.1;Name=WP_051482342.1;Ontology_term=GO:0009307,GO:0009036;gbkey=CDS;go_function=type II site-specific deoxyribonuclease activity|0009036||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF020757.2;locus_tag=LPH58_RS06770;product=BglII/BstYI family type II restriction endonuclease;protein_id=WP_051482342.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1539595 1540488 . - . ID=gene-LPH58_RS06775;Name=ampE;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=LPH58_RS06775;old_locus_tag=LPH58_06775 NZ_CP087690.1 Protein Homology CDS 1539595 1540488 . - 0 ID=cds-WP_038271558.1;Parent=gene-LPH58_RS06775;Dbxref=Genbank:WP_038271558.1;Name=WP_038271558.1;gbkey=CDS;gene=ampE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337811.1;locus_tag=LPH58_RS06775;product=regulatory signaling modulator protein AmpE;protein_id=WP_038271558.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1541513 1545163 . - . ID=gene-LPH58_RS06780;Name=LPH58_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06780;old_locus_tag=LPH58_06780 NZ_CP087690.1 Protein Homology CDS 1541513 1545163 . - 0 ID=cds-WP_114867132.1;Parent=gene-LPH58_RS06780;Dbxref=Genbank:WP_114867132.1;Name=WP_114867132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337810.1;locus_tag=LPH58_RS06780;product=YadA-like family protein;protein_id=WP_114867132.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1546241 1546843 . + . ID=gene-LPH58_RS06785;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LPH58_RS06785;old_locus_tag=LPH58_06785 NZ_CP087690.1 Protein Homology CDS 1546241 1546843 . + 0 ID=cds-WP_038273009.1;Parent=gene-LPH58_RS06785;Dbxref=Genbank:WP_038273009.1;Name=WP_038273009.1;Ontology_term=GO:0042559,GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=pteridine-containing compound biosynthetic process|0042559||IEA,tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158364.1;locus_tag=LPH58_RS06785;product=GTP cyclohydrolase I FolE;protein_id=WP_038273009.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1547514 1548092 . + . ID=gene-LPH58_RS06790;Name=LPH58_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06790;old_locus_tag=LPH58_06790 NZ_CP087690.1 Protein Homology CDS 1547514 1548092 . + 0 ID=cds-WP_038273004.1;Parent=gene-LPH58_RS06790;Dbxref=Genbank:WP_038273004.1;Name=WP_038273004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091135.1;locus_tag=LPH58_RS06790;product=gamma carbonic anhydrase family protein;protein_id=WP_038273004.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1549143 1549892 . - . ID=gene-LPH58_RS06795;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LPH58_RS06795;old_locus_tag=LPH58_06795 NZ_CP087690.1 Protein Homology CDS 1549143 1549892 . - 0 ID=cds-WP_038273001.1;Parent=gene-LPH58_RS06795;Dbxref=Genbank:WP_038273001.1;Name=WP_038273001.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894443.1;locus_tag=LPH58_RS06795;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_038273001.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1550276 1552804 . - . ID=gene-LPH58_RS06800;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LPH58_RS06800;old_locus_tag=LPH58_06800 NZ_CP087690.1 Protein Homology CDS 1550276 1552804 . - 0 ID=cds-WP_038272997.1;Parent=gene-LPH58_RS06800;Dbxref=Genbank:WP_038272997.1;Name=WP_038272997.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851070.1;locus_tag=LPH58_RS06800;product=ribonuclease R;protein_id=WP_038272997.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1553911 1554387 . + . ID=gene-LPH58_RS06805;Name=LPH58_RS06805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06805;old_locus_tag=LPH58_06805;partial=true;pseudo=true;start_range=.,1553911 NZ_CP087690.1 Protein Homology CDS 1553911 1554387 . + 0 ID=cds-LPH58_RS06805;Parent=gene-LPH58_RS06805;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090827.1;locus_tag=LPH58_RS06805;partial=true;product=BRO family protein;pseudo=true;start_range=.,1553911;transl_table=11 NZ_CP087690.1 RefSeq gene 1554579 1555088 . + . ID=gene-LPH58_RS06810;Name=LPH58_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06810;old_locus_tag=LPH58_06810 NZ_CP087690.1 Protein Homology CDS 1554579 1555088 . + 0 ID=cds-WP_114867133.1;Parent=gene-LPH58_RS06810;Dbxref=Genbank:WP_114867133.1;Name=WP_114867133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894761.1;locus_tag=LPH58_RS06810;product=lysozyme;protein_id=WP_114867133.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1555081 1555407 . + . ID=gene-LPH58_RS06815;Name=LPH58_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06815;old_locus_tag=LPH58_06815 NZ_CP087690.1 Protein Homology CDS 1555081 1555407 . + 0 ID=cds-WP_038272608.1;Parent=gene-LPH58_RS06815;Dbxref=Genbank:WP_038272608.1;Name=WP_038272608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852373.1;locus_tag=LPH58_RS06815;product=phage holin family protein;protein_id=WP_038272608.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1555397 1555858 . + . ID=gene-LPH58_RS06820;Name=LPH58_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06820;old_locus_tag=LPH58_06820 NZ_CP087690.1 Protein Homology CDS 1555397 1555858 . + 0 ID=cds-WP_038272730.1-2;Parent=gene-LPH58_RS06820;Dbxref=Genbank:WP_038272730.1;Name=WP_038272730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086887.1;locus_tag=LPH58_RS06820;product=hypothetical protein;protein_id=WP_038272730.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1555860 1556075 . + . ID=gene-LPH58_RS06825;Name=LPH58_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06825;old_locus_tag=LPH58_06825 NZ_CP087690.1 Protein Homology CDS 1555860 1556075 . + 0 ID=cds-WP_038272603.1;Parent=gene-LPH58_RS06825;Dbxref=Genbank:WP_038272603.1;Name=WP_038272603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085111.1;locus_tag=LPH58_RS06825;product=hypothetical protein;protein_id=WP_038272603.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1556080 1556613 . + . ID=gene-LPH58_RS06830;Name=LPH58_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06830;old_locus_tag=LPH58_06830 NZ_CP087690.1 GeneMarkS-2+ CDS 1556080 1556613 . + 0 ID=cds-WP_051482374.1;Parent=gene-LPH58_RS06830;Dbxref=Genbank:WP_051482374.1;Name=WP_051482374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06830;product=glycosyltransferase family A protein;protein_id=WP_051482374.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1556606 1557112 . + . ID=gene-LPH58_RS06835;Name=LPH58_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06835;old_locus_tag=LPH58_06835 NZ_CP087690.1 GeneMarkS-2+ CDS 1556606 1557112 . + 0 ID=cds-WP_038272601.1;Parent=gene-LPH58_RS06835;Dbxref=Genbank:WP_038272601.1;Name=WP_038272601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06835;product=hypothetical protein;protein_id=WP_038272601.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1557109 1557942 . + . ID=gene-LPH58_RS06840;Name=LPH58_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06840;old_locus_tag=LPH58_06840 NZ_CP087690.1 Protein Homology CDS 1557109 1557942 . + 0 ID=cds-WP_200866213.1;Parent=gene-LPH58_RS06840;Dbxref=Genbank:WP_200866213.1;Name=WP_200866213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028088.2;locus_tag=LPH58_RS06840;product=tail fiber assembly protein;protein_id=WP_200866213.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1558152 1558454 . + . ID=gene-LPH58_RS06845;Name=LPH58_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06845;old_locus_tag=LPH58_06845 NZ_CP087690.1 Protein Homology CDS 1558152 1558454 . + 0 ID=cds-WP_038272599.1;Parent=gene-LPH58_RS06845;Dbxref=Genbank:WP_038272599.1;Name=WP_038272599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574518.1;locus_tag=LPH58_RS06845;product=type II toxin-antitoxin system HigB family toxin;protein_id=WP_038272599.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1558458 1558829 . + . ID=gene-LPH58_RS06850;Name=LPH58_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06850;old_locus_tag=LPH58_06850 NZ_CP087690.1 Protein Homology CDS 1558458 1558829 . + 0 ID=cds-WP_230428215.1;Parent=gene-LPH58_RS06850;Dbxref=Genbank:WP_230428215.1;Name=WP_230428215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008208406.1;locus_tag=LPH58_RS06850;product=transcriptional regulator;protein_id=WP_230428215.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1559178 1559468 . + . ID=gene-LPH58_RS06855;Name=LPH58_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06855;old_locus_tag=LPH58_06855 NZ_CP087690.1 GeneMarkS-2+ CDS 1559178 1559468 . + 0 ID=cds-WP_152536656.1;Parent=gene-LPH58_RS06855;Dbxref=Genbank:WP_152536656.1;Name=WP_152536656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06855;product=hypothetical protein;protein_id=WP_152536656.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1559488 1559709 . + . ID=gene-LPH58_RS06860;Name=LPH58_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06860;old_locus_tag=LPH58_06860 NZ_CP087690.1 Protein Homology CDS 1559488 1559709 . + 0 ID=cds-WP_038272593.1;Parent=gene-LPH58_RS06860;Dbxref=Genbank:WP_038272593.1;Name=WP_038272593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088612.1;locus_tag=LPH58_RS06860;product=EexN family lipoprotein;protein_id=WP_038272593.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1560568 1560795 . + . ID=gene-LPH58_RS06865;Name=LPH58_RS06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06865;old_locus_tag=LPH58_06865 NZ_CP087690.1 Protein Homology CDS 1560568 1560795 . + 0 ID=cds-WP_038272591.1;Parent=gene-LPH58_RS06865;Dbxref=Genbank:WP_038272591.1;Name=WP_038272591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157548.1;locus_tag=LPH58_RS06865;product=hypothetical protein;protein_id=WP_038272591.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1560914 1563239 . + . ID=gene-LPH58_RS06870;Name=LPH58_RS06870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS06870;old_locus_tag=LPH58_06870;pseudo=true NZ_CP087690.1 Protein Homology CDS 1560914 1563239 . + 0 ID=cds-LPH58_RS06870;Parent=gene-LPH58_RS06870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851372.1;locus_tag=LPH58_RS06870;product=Tex family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1564193 1564345 . + . ID=gene-LPH58_RS06875;Name=LPH58_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06875;old_locus_tag=LPH58_06875 NZ_CP087690.1 GeneMarkS-2+ CDS 1564193 1564345 . + 0 ID=cds-WP_201745808.1;Parent=gene-LPH58_RS06875;Dbxref=Genbank:WP_201745808.1;Name=WP_201745808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06875;product=hypothetical protein;protein_id=WP_201745808.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1564418 1564609 . - . ID=gene-LPH58_RS06880;Name=LPH58_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06880;old_locus_tag=LPH58_06880 NZ_CP087690.1 GeneMarkS-2+ CDS 1564418 1564609 . - 0 ID=cds-WP_201745809.1;Parent=gene-LPH58_RS06880;Dbxref=Genbank:WP_201745809.1;Name=WP_201745809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06880;product=alpha/beta hydrolase;protein_id=WP_201745809.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1564778 1565896 . - . ID=gene-LPH58_RS06885;Name=LPH58_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06885;old_locus_tag=LPH58_06885 NZ_CP087690.1 Protein Homology CDS 1564778 1565896 . - 0 ID=cds-WP_230428504.1;Parent=gene-LPH58_RS06885;Dbxref=Genbank:WP_230428504.1;Name=WP_230428504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019336814.1;locus_tag=LPH58_RS06885;product=MFS transporter;protein_id=WP_230428504.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1566176 1567066 . + . ID=gene-LPH58_RS06890;Name=LPH58_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06890;old_locus_tag=LPH58_06890 NZ_CP087690.1 Protein Homology CDS 1566176 1567066 . + 0 ID=cds-WP_114867135.1;Parent=gene-LPH58_RS06890;Dbxref=Genbank:WP_114867135.1;Name=WP_114867135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006367409.1;locus_tag=LPH58_RS06890;product=LysR family transcriptional regulator;protein_id=WP_114867135.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1567310 1567636 . - . ID=gene-LPH58_RS06895;Name=LPH58_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06895;old_locus_tag=LPH58_06895 NZ_CP087690.1 GeneMarkS-2+ CDS 1567310 1567636 . - 0 ID=cds-WP_038272586.1;Parent=gene-LPH58_RS06895;Dbxref=Genbank:WP_038272586.1;Name=WP_038272586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06895;product=hypothetical protein;protein_id=WP_038272586.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1567693 1569765 . + . ID=gene-LPH58_RS06900;Name=LPH58_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06900;old_locus_tag=LPH58_06900 NZ_CP087690.1 Protein Homology CDS 1567693 1569765 . + 0 ID=cds-WP_038272583.1;Parent=gene-LPH58_RS06900;Dbxref=Genbank:WP_038272583.1;Name=WP_038272583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237114.1;locus_tag=LPH58_RS06900;product=tetratricopeptide repeat protein;protein_id=WP_038272583.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1569853 1570467 . + . ID=gene-LPH58_RS06905;Name=LPH58_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06905;old_locus_tag=LPH58_06905 NZ_CP087690.1 Protein Homology CDS 1569853 1570467 . + 0 ID=cds-WP_038272582.1;Parent=gene-LPH58_RS06905;Dbxref=Genbank:WP_038272582.1;Name=WP_038272582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851370.1;locus_tag=LPH58_RS06905;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_038272582.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1572133 1572669 . + . ID=gene-LPH58_RS06910;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LPH58_RS06910;old_locus_tag=LPH58_06910 NZ_CP087690.1 Protein Homology CDS 1572133 1572669 . + 0 ID=cds-WP_038272580.1;Parent=gene-LPH58_RS06910;Dbxref=Genbank:WP_038272580.1;Name=WP_038272580.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851369.1;locus_tag=LPH58_RS06910;product=inorganic diphosphatase;protein_id=WP_038272580.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1574323 1575183 . - . ID=gene-LPH58_RS06915;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LPH58_RS06915;old_locus_tag=LPH58_06915 NZ_CP087690.1 Protein Homology CDS 1574323 1575183 . - 0 ID=cds-WP_038272574.1;Parent=gene-LPH58_RS06915;Dbxref=Genbank:WP_038272574.1;Name=WP_038272574.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005919399.1;locus_tag=LPH58_RS06915;product=thioredoxin;protein_id=WP_038272574.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1575359 1575964 . + . ID=gene-LPH58_RS06920;Name=LPH58_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06920;old_locus_tag=LPH58_06920 NZ_CP087690.1 Protein Homology CDS 1575359 1575964 . + 0 ID=cds-WP_038272571.1;Parent=gene-LPH58_RS06920;Dbxref=Genbank:WP_038272571.1;Name=WP_038272571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088593.1;locus_tag=LPH58_RS06920;product=DUF998 domain-containing protein;protein_id=WP_038272571.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1576048 1578687 . + . ID=gene-LPH58_RS06925;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LPH58_RS06925;old_locus_tag=LPH58_06925 NZ_CP087690.1 Protein Homology CDS 1576048 1578687 . + 0 ID=cds-WP_038272610.1;Parent=gene-LPH58_RS06925;Dbxref=Genbank:WP_038272610.1;Name=WP_038272610.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183388.1;locus_tag=LPH58_RS06925;product=leucine--tRNA ligase;protein_id=WP_038272610.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1578777 1579379 . + . ID=gene-LPH58_RS06930;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LPH58_RS06930;old_locus_tag=LPH58_06930 NZ_CP087690.1 Protein Homology CDS 1578777 1579379 . + 0 ID=cds-WP_038272569.1;Parent=gene-LPH58_RS06930;Dbxref=Genbank:WP_038272569.1;Name=WP_038272569.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088585.1;locus_tag=LPH58_RS06930;product=LPS assembly lipoprotein LptE;protein_id=WP_038272569.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1579390 1580421 . + . ID=gene-LPH58_RS06935;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LPH58_RS06935;old_locus_tag=LPH58_06935 NZ_CP087690.1 Protein Homology CDS 1579390 1580421 . + 0 ID=cds-WP_114867136.1;Parent=gene-LPH58_RS06935;Dbxref=Genbank:WP_114867136.1;Name=WP_114867136.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116404.1;locus_tag=LPH58_RS06935;product=DNA polymerase III subunit delta;protein_id=WP_114867136.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1580450 1581118 . + . ID=gene-LPH58_RS06940;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=LPH58_RS06940;old_locus_tag=LPH58_06940 NZ_CP087690.1 Protein Homology CDS 1580450 1581118 . + 0 ID=cds-WP_038273039.1;Parent=gene-LPH58_RS06940;Dbxref=Genbank:WP_038273039.1;Name=WP_038273039.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086142.1;locus_tag=LPH58_RS06940;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_038273039.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1581171 1581572 . + . ID=gene-LPH58_RS06945;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LPH58_RS06945;old_locus_tag=LPH58_06945 NZ_CP087690.1 Protein Homology CDS 1581171 1581572 . + 0 ID=cds-WP_038273036.1;Parent=gene-LPH58_RS06945;Dbxref=Genbank:WP_038273036.1;Name=WP_038273036.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607331.1;locus_tag=LPH58_RS06945;product=ribosome silencing factor;protein_id=WP_038273036.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1581815 1581988 . - . ID=gene-LPH58_RS06950;Name=LPH58_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06950;old_locus_tag=LPH58_06950 NZ_CP087690.1 Protein Homology CDS 1581815 1581988 . - 0 ID=cds-WP_114867137.1;Parent=gene-LPH58_RS06950;Dbxref=Genbank:WP_114867137.1;Name=WP_114867137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086144.1;locus_tag=LPH58_RS06950;product=DUF5668 domain-containing protein;protein_id=WP_114867137.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1582026 1582154 . - . ID=gene-LPH58_RS11970;Name=LPH58_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11970 NZ_CP087690.1 GeneMarkS-2+ CDS 1582026 1582154 . - 0 ID=cds-WP_267903150.1;Parent=gene-LPH58_RS11970;Dbxref=Genbank:WP_267903150.1;Name=WP_267903150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11970;product=hypothetical protein;protein_id=WP_267903150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1582790 1583905 . + . ID=gene-LPH58_RS06955;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LPH58_RS06955;old_locus_tag=LPH58_06955 NZ_CP087690.1 Protein Homology CDS 1582790 1583905 . + 0 ID=cds-WP_038273033.1;Parent=gene-LPH58_RS06955;Dbxref=Genbank:WP_038273033.1;Name=WP_038273033.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382650.1;locus_tag=LPH58_RS06955;product=lytic murein transglycosylase B;protein_id=WP_038273033.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1583902 1585143 . + . ID=gene-LPH58_RS06960;Name=LPH58_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06960;old_locus_tag=LPH58_06960 NZ_CP087690.1 Protein Homology CDS 1583902 1585143 . + 0 ID=cds-WP_038273031.1;Parent=gene-LPH58_RS06960;Dbxref=Genbank:WP_038273031.1;Name=WP_038273031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894633.1;locus_tag=LPH58_RS06960;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_038273031.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1585645 1586253 . - . ID=gene-LPH58_RS06965;Name=LPH58_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06965;old_locus_tag=LPH58_06965 NZ_CP087690.1 Protein Homology CDS 1585645 1586253 . - 0 ID=cds-WP_038273050.1;Parent=gene-LPH58_RS06965;Dbxref=Genbank:WP_038273050.1;Name=WP_038273050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300253.1;locus_tag=LPH58_RS06965;product=rhomboid family intramembrane serine protease;protein_id=WP_038273050.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1586661 1586984 . - . ID=gene-LPH58_RS06970;Name=LPH58_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06970;old_locus_tag=LPH58_06970 NZ_CP087690.1 GeneMarkS-2+ CDS 1586661 1586984 . - 0 ID=cds-WP_038273029.1;Parent=gene-LPH58_RS06970;Dbxref=Genbank:WP_038273029.1;Name=WP_038273029.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06970;product=hypothetical protein;protein_id=WP_038273029.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1586996 1587241 . + . ID=gene-LPH58_RS06975;Name=LPH58_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06975;old_locus_tag=LPH58_06975 NZ_CP087690.1 GeneMarkS-2+ CDS 1586996 1587241 . + 0 ID=cds-WP_230428217.1;Parent=gene-LPH58_RS06975;Dbxref=Genbank:WP_230428217.1;Name=WP_230428217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS06975;product=hypothetical protein;protein_id=WP_230428217.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1587361 1587741 . - . ID=gene-LPH58_RS06980;Name=LPH58_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06980;old_locus_tag=LPH58_06980 NZ_CP087690.1 Protein Homology CDS 1587361 1587741 . - 0 ID=cds-WP_038273027.1;Parent=gene-LPH58_RS06980;Dbxref=Genbank:WP_038273027.1;Name=WP_038273027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098380.1;locus_tag=LPH58_RS06980;product=DUF596 domain-containing protein;protein_id=WP_038273027.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1587746 1588018 . - . ID=gene-LPH58_RS06985;Name=LPH58_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06985;old_locus_tag=LPH58_06985 NZ_CP087690.1 Protein Homology CDS 1587746 1588018 . - 0 ID=cds-WP_038273025.1;Parent=gene-LPH58_RS06985;Dbxref=Genbank:WP_038273025.1;Name=WP_038273025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337939.1;locus_tag=LPH58_RS06985;product=hypothetical protein;protein_id=WP_038273025.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1588178 1588306 . - . ID=gene-LPH58_RS11975;Name=LPH58_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11975 NZ_CP087690.1 GeneMarkS-2+ CDS 1588178 1588306 . - 0 ID=cds-WP_267903151.1;Parent=gene-LPH58_RS11975;Dbxref=Genbank:WP_267903151.1;Name=WP_267903151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11975;product=hypothetical protein;protein_id=WP_267903151.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1588278 1588661 . - . ID=gene-LPH58_RS06990;Name=LPH58_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06990;old_locus_tag=LPH58_06990 NZ_CP087690.1 Protein Homology CDS 1588278 1588661 . - 0 ID=cds-WP_038273048.1;Parent=gene-LPH58_RS06990;Dbxref=Genbank:WP_038273048.1;Name=WP_038273048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS06990;product=DUF596 domain-containing protein;protein_id=WP_038273048.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1588673 1589110 . - . ID=gene-LPH58_RS06995;Name=LPH58_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS06995;old_locus_tag=LPH58_06995 NZ_CP087690.1 Protein Homology CDS 1588673 1589110 . - 0 ID=cds-WP_081755493.1;Parent=gene-LPH58_RS06995;Dbxref=Genbank:WP_081755493.1;Name=WP_081755493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH58_RS06995;product=DUF769 domain-containing protein;protein_id=WP_081755493.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1589052 1589414 . - . ID=gene-LPH58_RS07000;Name=LPH58_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07000;old_locus_tag=LPH58_07000 NZ_CP087690.1 Protein Homology CDS 1589052 1589414 . - 0 ID=cds-WP_051482393.1;Parent=gene-LPH58_RS07000;Dbxref=Genbank:WP_051482393.1;Name=WP_051482393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS07000;product=DUF596 domain-containing protein;protein_id=WP_051482393.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1589426 1589680 . - . ID=gene-LPH58_RS07005;Name=LPH58_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07005;old_locus_tag=LPH58_07005 NZ_CP087690.1 Protein Homology CDS 1589426 1589680 . - 0 ID=cds-WP_230428218.1;Parent=gene-LPH58_RS07005;Dbxref=Genbank:WP_230428218.1;Name=WP_230428218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894642.1;locus_tag=LPH58_RS07005;product=hemagglutinin;protein_id=WP_230428218.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1589796 1589951 . - . ID=gene-LPH58_RS07010;Name=LPH58_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07010;old_locus_tag=LPH58_07010 NZ_CP087690.1 GeneMarkS-2+ CDS 1589796 1589951 . - 0 ID=cds-WP_160165232.1;Parent=gene-LPH58_RS07010;Dbxref=Genbank:WP_160165232.1;Name=WP_160165232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07010;product=hypothetical protein;protein_id=WP_160165232.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1589923 1590315 . - . ID=gene-LPH58_RS07015;Name=LPH58_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07015;old_locus_tag=LPH58_07015 NZ_CP087690.1 Protein Homology CDS 1589923 1590315 . - 0 ID=cds-WP_038273019.1;Parent=gene-LPH58_RS07015;Dbxref=Genbank:WP_038273019.1;Name=WP_038273019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS07015;product=DUF596 domain-containing protein;protein_id=WP_038273019.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1590320 1591453 . - . ID=gene-LPH58_RS07020;Name=LPH58_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07020;old_locus_tag=LPH58_07020 NZ_CP087690.1 Protein Homology CDS 1590320 1591453 . - 0 ID=cds-WP_114867139.1;Parent=gene-LPH58_RS07020;Dbxref=Genbank:WP_114867139.1;Name=WP_114867139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH58_RS07020;product=DUF769 domain-containing protein;protein_id=WP_114867139.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1591605 1592153 . - . ID=gene-LPH58_RS07025;Name=LPH58_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07025;old_locus_tag=LPH58_07025 NZ_CP087690.1 GeneMarkS-2+ CDS 1591605 1592153 . - 0 ID=cds-WP_038273182.1;Parent=gene-LPH58_RS07025;Dbxref=Genbank:WP_038273182.1;Name=WP_038273182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07025;product=hypothetical protein;protein_id=WP_038273182.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1592150 1592464 . - . ID=gene-LPH58_RS07030;Name=LPH58_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07030;old_locus_tag=LPH58_07030 NZ_CP087690.1 GeneMarkS-2+ CDS 1592150 1592464 . - 0 ID=cds-WP_038273185.1;Parent=gene-LPH58_RS07030;Dbxref=Genbank:WP_038273185.1;Name=WP_038273185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07030;product=hypothetical protein;protein_id=WP_038273185.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1592623 1593012 . - . ID=gene-LPH58_RS07035;Name=LPH58_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07035;old_locus_tag=LPH58_07035 NZ_CP087690.1 Protein Homology CDS 1592623 1593012 . - 0 ID=cds-WP_038273188.1;Parent=gene-LPH58_RS07035;Dbxref=Genbank:WP_038273188.1;Name=WP_038273188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS07035;product=DUF596 domain-containing protein;protein_id=WP_038273188.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1593024 1594334 . - . ID=gene-LPH58_RS07040;Name=LPH58_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07040;old_locus_tag=LPH58_07040 NZ_CP087690.1 Protein Homology CDS 1593024 1594334 . - 0 ID=cds-WP_230428219.1;Parent=gene-LPH58_RS07040;Dbxref=Genbank:WP_230428219.1;Name=WP_230428219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382791.1;locus_tag=LPH58_RS07040;product=DUF769 domain-containing protein;protein_id=WP_230428219.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1594699 1594863 . - . ID=gene-LPH58_RS07045;Name=LPH58_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07045;old_locus_tag=LPH58_07045 NZ_CP087690.1 GeneMarkS-2+ CDS 1594699 1594863 . - 0 ID=cds-WP_160165238.1;Parent=gene-LPH58_RS07045;Dbxref=Genbank:WP_160165238.1;Name=WP_160165238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07045;product=hypothetical protein;protein_id=WP_160165238.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1594835 1595227 . - . ID=gene-LPH58_RS07050;Name=LPH58_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07050;old_locus_tag=LPH58_07050 NZ_CP087690.1 Protein Homology CDS 1594835 1595227 . - 0 ID=cds-WP_038273239.1;Parent=gene-LPH58_RS07050;Dbxref=Genbank:WP_038273239.1;Name=WP_038273239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086150.1;locus_tag=LPH58_RS07050;product=DUF596 domain-containing protein;protein_id=WP_038273239.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1595239 1595568 . - . ID=gene-LPH58_RS07055;Name=LPH58_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07055;old_locus_tag=LPH58_07055 NZ_CP087690.1 Protein Homology CDS 1595239 1595568 . - 0 ID=cds-WP_114867141.1;Parent=gene-LPH58_RS07055;Dbxref=Genbank:WP_114867141.1;Name=WP_114867141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH58_RS07055;product=DUF769 domain-containing protein;protein_id=WP_114867141.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1595633 1596058 . - . ID=gene-LPH58_RS07060;Name=LPH58_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07060;old_locus_tag=LPH58_07060 NZ_CP087690.1 GeneMarkS-2+ CDS 1595633 1596058 . - 0 ID=cds-WP_038273237.1;Parent=gene-LPH58_RS07060;Dbxref=Genbank:WP_038273237.1;Name=WP_038273237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07060;product=hypothetical protein;protein_id=WP_038273237.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1596055 1599003 . - . ID=gene-LPH58_RS07065;Name=LPH58_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07065;old_locus_tag=LPH58_07065 NZ_CP087690.1 Protein Homology CDS 1596055 1599003 . - 0 ID=cds-WP_114867142.1;Parent=gene-LPH58_RS07065;Dbxref=Genbank:WP_114867142.1;Name=WP_114867142.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LPH58_RS07065;product=hemagglutinin repeat-containing protein;protein_id=WP_114867142.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1599043 1599864 . - . ID=gene-LPH58_RS07070;Name=LPH58_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07070;old_locus_tag=LPH58_07070 NZ_CP087690.1 Protein Homology CDS 1599043 1599864 . - 0 ID=cds-WP_114867143.1;Parent=gene-LPH58_RS07070;Dbxref=Genbank:WP_114867143.1;Name=WP_114867143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338067.1;locus_tag=LPH58_RS07070;product=DUF769 domain-containing protein;protein_id=WP_114867143.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1599873 1600688 . - . ID=gene-LPH58_RS07075;Name=LPH58_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07075;old_locus_tag=LPH58_07075 NZ_CP087690.1 Protein Homology CDS 1599873 1600688 . - 0 ID=cds-WP_038273126.1;Parent=gene-LPH58_RS07075;Dbxref=Genbank:WP_038273126.1;Name=WP_038273126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089585.1;locus_tag=LPH58_RS07075;product=DUF769 domain-containing protein;protein_id=WP_038273126.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1600703 1601518 . - . ID=gene-LPH58_RS07080;Name=LPH58_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07080;old_locus_tag=LPH58_07080 NZ_CP087690.1 Protein Homology CDS 1600703 1601518 . - 0 ID=cds-WP_038273128.1;Parent=gene-LPH58_RS07080;Dbxref=Genbank:WP_038273128.1;Name=WP_038273128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852863.1;locus_tag=LPH58_RS07080;product=DUF769 domain-containing protein;protein_id=WP_038273128.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1601533 1602357 . - . ID=gene-LPH58_RS07085;Name=LPH58_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07085;old_locus_tag=LPH58_07085 NZ_CP087690.1 Protein Homology CDS 1601533 1602357 . - 0 ID=cds-WP_038273131.1;Parent=gene-LPH58_RS07085;Dbxref=Genbank:WP_038273131.1;Name=WP_038273131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338067.1;locus_tag=LPH58_RS07085;product=DUF769 domain-containing protein;protein_id=WP_038273131.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1602366 1603178 . - . ID=gene-LPH58_RS07090;Name=LPH58_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07090;old_locus_tag=LPH58_07090 NZ_CP087690.1 Protein Homology CDS 1602366 1603178 . - 0 ID=cds-WP_114867144.1;Parent=gene-LPH58_RS07090;Dbxref=Genbank:WP_114867144.1;Name=WP_114867144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852863.1;locus_tag=LPH58_RS07090;product=DUF769 domain-containing protein;protein_id=WP_114867144.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1603184 1612549 . - . ID=gene-LPH58_RS07095;Name=LPH58_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07095;old_locus_tag=LPH58_07095 NZ_CP087690.1 Protein Homology CDS 1603184 1612549 . - 0 ID=cds-WP_230428220.1;Parent=gene-LPH58_RS07095;Dbxref=Genbank:WP_230428220.1;Name=WP_230428220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098253.1;locus_tag=LPH58_RS07095;product=hemagglutinin repeat-containing protein;protein_id=WP_230428220.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1612509 1613879 . - . ID=gene-LPH58_RS07100;Name=LPH58_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07100;old_locus_tag=LPH58_07100 NZ_CP087690.1 Protein Homology CDS 1612509 1613879 . - 0 ID=cds-WP_114867153.1;Parent=gene-LPH58_RS07100;Dbxref=Genbank:WP_114867153.1;Name=WP_114867153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LPH58_RS07100;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_114867153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1614278 1614547 . + . ID=gene-LPH58_RS07105;Name=LPH58_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07105;old_locus_tag=LPH58_07105 NZ_CP087690.1 Protein Homology CDS 1614278 1614547 . + 0 ID=cds-WP_038273253.1;Parent=gene-LPH58_RS07105;Dbxref=Genbank:WP_038273253.1;Name=WP_038273253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001260984.1;locus_tag=LPH58_RS07105;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_038273253.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1614544 1614864 . + . ID=gene-LPH58_RS07110;Name=LPH58_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07110;old_locus_tag=LPH58_07110 NZ_CP087690.1 Protein Homology CDS 1614544 1614864 . + 0 ID=cds-WP_038273255.1;Parent=gene-LPH58_RS07110;Dbxref=Genbank:WP_038273255.1;Name=WP_038273255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117139.1;locus_tag=LPH58_RS07110;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038273255.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1614943 1615254 . - . ID=gene-LPH58_RS07115;Name=LPH58_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07115;old_locus_tag=LPH58_07115 NZ_CP087690.1 Protein Homology CDS 1614943 1615254 . - 0 ID=cds-WP_081755498.1;Parent=gene-LPH58_RS07115;Dbxref=Genbank:WP_081755498.1;Name=WP_081755498.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025298.2;locus_tag=LPH58_RS07115;product=DNA/RNA non-specific endonuclease;protein_id=WP_081755498.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1615191 1615430 . - . ID=gene-LPH58_RS07120;Name=LPH58_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07120;old_locus_tag=LPH58_07120 NZ_CP087690.1 GeneMarkS-2+ CDS 1615191 1615430 . - 0 ID=cds-WP_114867147.1;Parent=gene-LPH58_RS07120;Dbxref=Genbank:WP_114867147.1;Name=WP_114867147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07120;product=hypothetical protein;protein_id=WP_114867147.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1615845 1616237 . - . ID=gene-LPH58_RS07125;Name=LPH58_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07125;old_locus_tag=LPH58_07125 NZ_CP087690.1 Protein Homology CDS 1615845 1616237 . - 0 ID=cds-WP_038273145.1;Parent=gene-LPH58_RS07125;Dbxref=Genbank:WP_038273145.1;Name=WP_038273145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086150.1;locus_tag=LPH58_RS07125;product=DUF596 domain-containing protein;protein_id=WP_038273145.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1616249 1616602 . - . ID=gene-LPH58_RS07130;Name=LPH58_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07130;old_locus_tag=LPH58_07130 NZ_CP087690.1 Protein Homology CDS 1616249 1616602 . - 0 ID=cds-WP_114867148.1;Parent=gene-LPH58_RS07130;Dbxref=Genbank:WP_114867148.1;Name=WP_114867148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090789.1;locus_tag=LPH58_RS07130;product=DUF769 domain-containing protein;protein_id=WP_114867148.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1616682 1617068 . - . ID=gene-LPH58_RS07135;Name=LPH58_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07135;old_locus_tag=LPH58_07135 NZ_CP087690.1 Protein Homology CDS 1616682 1617068 . - 0 ID=cds-WP_038273143.1;Parent=gene-LPH58_RS07135;Dbxref=Genbank:WP_038273143.1;Name=WP_038273143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088333.1;locus_tag=LPH58_RS07135;product=DUF596 domain-containing protein;protein_id=WP_038273143.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1617073 1617405 . - . ID=gene-LPH58_RS07140;Name=LPH58_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07140;old_locus_tag=LPH58_07140 NZ_CP087690.1 Protein Homology CDS 1617073 1617405 . - 0 ID=cds-WP_114867149.1;Parent=gene-LPH58_RS07140;Dbxref=Genbank:WP_114867149.1;Name=WP_114867149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH58_RS07140;product=DUF769 domain-containing protein;protein_id=WP_114867149.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1617471 1617908 . - . ID=gene-LPH58_RS07145;Name=LPH58_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07145;old_locus_tag=LPH58_07145 NZ_CP087690.1 GeneMarkS-2+ CDS 1617471 1617908 . - 0 ID=cds-WP_038273137.1;Parent=gene-LPH58_RS07145;Dbxref=Genbank:WP_038273137.1;Name=WP_038273137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07145;product=hypothetical protein;protein_id=WP_038273137.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1617905 1619080 . - . ID=gene-LPH58_RS07150;Name=LPH58_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07150;old_locus_tag=LPH58_07150 NZ_CP087690.1 Protein Homology CDS 1617905 1619080 . - 0 ID=cds-WP_205395216.1;Parent=gene-LPH58_RS07150;Dbxref=Genbank:WP_205395216.1;Name=WP_205395216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH58_RS07150;product=DNA/RNA non-specific endonuclease;protein_id=WP_205395216.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1619379 1619543 . - . ID=gene-LPH58_RS07155;Name=LPH58_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07155;old_locus_tag=LPH58_07155 NZ_CP087690.1 GeneMarkS-2+ CDS 1619379 1619543 . - 0 ID=cds-WP_160165237.1;Parent=gene-LPH58_RS07155;Dbxref=Genbank:WP_160165237.1;Name=WP_160165237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07155;product=hypothetical protein;protein_id=WP_160165237.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1619515 1619907 . - . ID=gene-LPH58_RS07160;Name=LPH58_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07160;old_locus_tag=LPH58_07160 NZ_CP087690.1 Protein Homology CDS 1619515 1619907 . - 0 ID=cds-WP_038273217.1;Parent=gene-LPH58_RS07160;Dbxref=Genbank:WP_038273217.1;Name=WP_038273217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894641.1;locus_tag=LPH58_RS07160;product=DUF596 domain-containing protein;protein_id=WP_038273217.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1619919 1620272 . - . ID=gene-LPH58_RS07165;Name=LPH58_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07165;old_locus_tag=LPH58_07165 NZ_CP087690.1 Protein Homology CDS 1619919 1620272 . - 0 ID=cds-WP_114867150.1;Parent=gene-LPH58_RS07165;Dbxref=Genbank:WP_114867150.1;Name=WP_114867150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098383.1;locus_tag=LPH58_RS07165;product=DUF769 domain-containing protein;protein_id=WP_114867150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1620352 1620744 . - . ID=gene-LPH58_RS07170;Name=LPH58_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07170;old_locus_tag=LPH58_07170 NZ_CP087690.1 Protein Homology CDS 1620352 1620744 . - 0 ID=cds-WP_038273215.1;Parent=gene-LPH58_RS07170;Dbxref=Genbank:WP_038273215.1;Name=WP_038273215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382790.1;locus_tag=LPH58_RS07170;product=DUF596 domain-containing protein;protein_id=WP_038273215.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1620756 1621892 . - . ID=gene-LPH58_RS07175;Name=LPH58_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07175;old_locus_tag=LPH58_07175 NZ_CP087690.1 Protein Homology CDS 1620756 1621892 . - 0 ID=cds-WP_114867151.1;Parent=gene-LPH58_RS07175;Dbxref=Genbank:WP_114867151.1;Name=WP_114867151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH58_RS07175;product=DUF769 domain-containing protein;protein_id=WP_114867151.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1622046 1622579 . - . ID=gene-LPH58_RS07180;Name=LPH58_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07180;old_locus_tag=LPH58_07180 NZ_CP087690.1 GeneMarkS-2+ CDS 1622046 1622579 . - 0 ID=cds-WP_038273268.1;Parent=gene-LPH58_RS07180;Dbxref=Genbank:WP_038273268.1;Name=WP_038273268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07180;product=hypothetical protein;protein_id=WP_038273268.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1622576 1623937 . - . ID=gene-LPH58_RS07185;Name=LPH58_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07185;old_locus_tag=LPH58_07185 NZ_CP087690.1 Protein Homology CDS 1622576 1623937 . - 0 ID=cds-WP_230428221.1;Parent=gene-LPH58_RS07185;Dbxref=Genbank:WP_230428221.1;Name=WP_230428221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382789.1;locus_tag=LPH58_RS07185;product=DUF769 domain-containing protein;protein_id=WP_230428221.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1624438 1624830 . - . ID=gene-LPH58_RS07190;Name=LPH58_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07190;old_locus_tag=LPH58_07190 NZ_CP087690.1 Protein Homology CDS 1624438 1624830 . - 0 ID=cds-WP_038273304.1;Parent=gene-LPH58_RS07190;Dbxref=Genbank:WP_038273304.1;Name=WP_038273304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS07190;product=DUF596 domain-containing protein;protein_id=WP_038273304.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1624842 1634231 . - . ID=gene-LPH58_RS07195;Name=LPH58_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07195;old_locus_tag=LPH58_07195 NZ_CP087690.1 Protein Homology CDS 1624842 1634231 . - 0 ID=cds-WP_114867152.1;Parent=gene-LPH58_RS07195;Dbxref=Genbank:WP_114867152.1;Name=WP_114867152.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LPH58_RS07195;product=hemagglutinin repeat-containing protein;protein_id=WP_114867152.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1634191 1635561 . - . ID=gene-LPH58_RS07200;Name=LPH58_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07200;old_locus_tag=LPH58_07200 NZ_CP087690.1 Protein Homology CDS 1634191 1635561 . - 0 ID=cds-WP_114867153.1-2;Parent=gene-LPH58_RS07200;Dbxref=Genbank:WP_114867153.1;Name=WP_114867153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LPH58_RS07200;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_114867153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1635856 1636068 . + . ID=gene-LPH58_RS07205;Name=LPH58_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07205;old_locus_tag=LPH58_07205 NZ_CP087690.1 GeneMarkS-2+ CDS 1635856 1636068 . + 0 ID=cds-WP_162814100.1;Parent=gene-LPH58_RS07205;Dbxref=Genbank:WP_162814100.1;Name=WP_162814100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07205;product=hypothetical protein;protein_id=WP_162814100.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1636075 1636437 . + . ID=gene-LPH58_RS07210;Name=LPH58_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07210;old_locus_tag=LPH58_07210 NZ_CP087690.1 GeneMarkS-2+ CDS 1636075 1636437 . + 0 ID=cds-WP_152536614.1;Parent=gene-LPH58_RS07210;Dbxref=Genbank:WP_152536614.1;Name=WP_152536614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07210;product=hypothetical protein;protein_id=WP_152536614.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1636609 1636734 . + . ID=gene-LPH58_RS11980;Name=LPH58_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11980 NZ_CP087690.1 GeneMarkS-2+ CDS 1636609 1636734 . + 0 ID=cds-WP_267903152.1;Parent=gene-LPH58_RS11980;Dbxref=Genbank:WP_267903152.1;Name=WP_267903152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11980;product=hypothetical protein;protein_id=WP_267903152.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1637470 1638036 . + . ID=gene-LPH58_RS07215;Name=LPH58_RS07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07215;old_locus_tag=LPH58_07215 NZ_CP087690.1 Protein Homology CDS 1637470 1638036 . + 0 ID=cds-WP_200866196.1;Parent=gene-LPH58_RS07215;Dbxref=Genbank:WP_200866196.1;Name=WP_200866196.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013933.2;locus_tag=LPH58_RS07215;product=LysE family translocator;protein_id=WP_200866196.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1638410 1639330 . + . ID=gene-LPH58_RS07220;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LPH58_RS07220;old_locus_tag=LPH58_07220 NZ_CP087690.1 Protein Homology CDS 1638410 1639330 . + 0 ID=cds-WP_038271207.1;Parent=gene-LPH58_RS07220;Dbxref=Genbank:WP_038271207.1;Name=WP_038271207.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088330.1;locus_tag=LPH58_RS07220;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_038271207.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1639492 1640019 . + . ID=gene-LPH58_RS07225;Name=LPH58_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07225;old_locus_tag=LPH58_07225 NZ_CP087690.1 GeneMarkS-2+ CDS 1639492 1640019 . + 0 ID=cds-WP_160165171.1;Parent=gene-LPH58_RS07225;Dbxref=Genbank:WP_160165171.1;Name=WP_160165171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07225;product=hypothetical protein;protein_id=WP_160165171.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1640154 1640597 . + . ID=gene-LPH58_RS07230;Name=LPH58_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07230;old_locus_tag=LPH58_07230 NZ_CP087690.1 Protein Homology CDS 1640154 1640597 . + 0 ID=cds-WP_038271205.1;Parent=gene-LPH58_RS07230;Dbxref=Genbank:WP_038271205.1;Name=WP_038271205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851337.1;locus_tag=LPH58_RS07230;product=hypothetical protein;protein_id=WP_038271205.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1640768 1640950 . - . ID=gene-LPH58_RS07235;Name=LPH58_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07235;old_locus_tag=LPH58_07235 NZ_CP087690.1 GeneMarkS-2+ CDS 1640768 1640950 . - 0 ID=cds-WP_230431741.1;Parent=gene-LPH58_RS07235;Dbxref=Genbank:WP_230431741.1;Name=WP_230431741.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07235;product=hypothetical protein;protein_id=WP_230431741.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1641203 1641769 . + . ID=gene-LPH58_RS07240;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=LPH58_RS07240;old_locus_tag=LPH58_07240 NZ_CP087690.1 Protein Homology CDS 1641203 1641769 . + 0 ID=cds-WP_114867220.1;Parent=gene-LPH58_RS07240;Dbxref=Genbank:WP_114867220.1;Name=WP_114867220.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009603592.1;locus_tag=LPH58_RS07240;product=elongation factor P-like protein YeiP;protein_id=WP_114867220.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1641912 1643300 . - . ID=gene-LPH58_RS07245;Name=LPH58_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07245;old_locus_tag=LPH58_07245 NZ_CP087690.1 Protein Homology CDS 1641912 1643300 . - 0 ID=cds-WP_038271203.1;Parent=gene-LPH58_RS07245;Dbxref=Genbank:WP_038271203.1;Name=WP_038271203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019399725.1;locus_tag=LPH58_RS07245;product=FAD-binding oxidoreductase;protein_id=WP_038271203.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1643483 1644724 . + . ID=gene-LPH58_RS07250;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=LPH58_RS07250;old_locus_tag=LPH58_07250 NZ_CP087690.1 Protein Homology CDS 1643483 1644724 . + 0 ID=cds-WP_038271202.1;Parent=gene-LPH58_RS07250;Dbxref=Genbank:WP_038271202.1;Name=WP_038271202.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005915394.1;locus_tag=LPH58_RS07250;product=phosphoglycerate dehydrogenase;protein_id=WP_038271202.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1645187 1646659 . + . ID=gene-LPH58_RS07255;Name=LPH58_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07255;old_locus_tag=LPH58_07255 NZ_CP087690.1 Protein Homology CDS 1645187 1646659 . + 0 ID=cds-WP_038271201.1;Parent=gene-LPH58_RS07255;Dbxref=Genbank:WP_038271201.1;Name=WP_038271201.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036992.1;locus_tag=LPH58_RS07255;product=amino acid permease;protein_id=WP_038271201.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1646731 1648155 . + . ID=gene-LPH58_RS07260;Name=LPH58_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07260;old_locus_tag=LPH58_07260 NZ_CP087690.1 Protein Homology CDS 1646731 1648155 . + 0 ID=cds-WP_038271200.1;Parent=gene-LPH58_RS07260;Dbxref=Genbank:WP_038271200.1;Name=WP_038271200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851332.1;locus_tag=LPH58_RS07260;product=amino acid permease;protein_id=WP_038271200.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1648193 1648849 . + . ID=gene-LPH58_RS07265;Name=LPH58_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07265;old_locus_tag=LPH58_07265 NZ_CP087690.1 Protein Homology CDS 1648193 1648849 . + 0 ID=cds-WP_038271199.1;Parent=gene-LPH58_RS07265;Dbxref=Genbank:WP_038271199.1;Name=WP_038271199.1;Ontology_term=GO:0019509,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851331.1;locus_tag=LPH58_RS07265;product=methylthioribulose 1-phosphate dehydratase;protein_id=WP_038271199.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1648885 1649451 . + . ID=gene-LPH58_RS07270;Name=LPH58_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07270;old_locus_tag=LPH58_07270 NZ_CP087690.1 Protein Homology CDS 1648885 1649451 . + 0 ID=cds-WP_038271198.1;Parent=gene-LPH58_RS07270;Dbxref=Genbank:WP_038271198.1;Name=WP_038271198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571451.1;locus_tag=LPH58_RS07270;product=acireductone dioxygenase;protein_id=WP_038271198.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1649454 1650152 . + . ID=gene-LPH58_RS07275;Name=mtnC;gbkey=Gene;gene=mtnC;gene_biotype=protein_coding;locus_tag=LPH58_RS07275;old_locus_tag=LPH58_07275 NZ_CP087690.1 Protein Homology CDS 1649454 1650152 . + 0 ID=cds-WP_038271197.1;Parent=gene-LPH58_RS07275;Dbxref=Genbank:WP_038271197.1;Name=WP_038271197.1;Ontology_term=GO:0019509,GO:0016791,GO:0016862;gbkey=CDS;gene=mtnC;go_function=phosphatase activity|0016791||IEA,intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303202.1;locus_tag=LPH58_RS07275;product=acireductone synthase;protein_id=WP_038271197.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1650291 1650473 . - . ID=gene-LPH58_RS07280;Name=LPH58_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07280;old_locus_tag=LPH58_07280 NZ_CP087690.1 GeneMarkS-2+ CDS 1650291 1650473 . - 0 ID=cds-WP_038271196.1;Parent=gene-LPH58_RS07280;Dbxref=Genbank:WP_038271196.1;Name=WP_038271196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07280;product=hypothetical protein;protein_id=WP_038271196.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1650901 1651065 . - . ID=gene-LPH58_RS07285;Name=LPH58_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07285;old_locus_tag=LPH58_07285 NZ_CP087690.1 GeneMarkS-2+ CDS 1650901 1651065 . - 0 ID=cds-WP_160199356.1;Parent=gene-LPH58_RS07285;Dbxref=Genbank:WP_160199356.1;Name=WP_160199356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07285;product=hypothetical protein;protein_id=WP_160199356.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1651308 1652276 . + . ID=gene-LPH58_RS07290;Name=LPH58_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07290;old_locus_tag=LPH58_07290 NZ_CP087690.1 Protein Homology CDS 1651308 1652276 . + 0 ID=cds-WP_081755435.1;Parent=gene-LPH58_RS07290;Dbxref=Genbank:WP_081755435.1;Name=WP_081755435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005997416.1;locus_tag=LPH58_RS07290;product=peptidase C13;protein_id=WP_081755435.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1653161 1653436 . + . ID=gene-LPH58_RS07295;Name=LPH58_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07295;old_locus_tag=LPH58_07295 NZ_CP087690.1 GeneMarkS-2+ CDS 1653161 1653436 . + 0 ID=cds-WP_038271193.1;Parent=gene-LPH58_RS07295;Dbxref=Genbank:WP_038271193.1;Name=WP_038271193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07295;product=hypothetical protein;protein_id=WP_038271193.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1654067 1654687 . - . ID=gene-LPH58_RS07300;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=LPH58_RS07300;old_locus_tag=LPH58_07300 NZ_CP087690.1 Protein Homology CDS 1654067 1654687 . - 0 ID=cds-WP_038271192.1;Parent=gene-LPH58_RS07300;Dbxref=Genbank:WP_038271192.1;Name=WP_038271192.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851328.1;locus_tag=LPH58_RS07300;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_038271192.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1654677 1655453 . - . ID=gene-LPH58_RS07305;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LPH58_RS07305;old_locus_tag=LPH58_07305 NZ_CP087690.1 Protein Homology CDS 1654677 1655453 . - 0 ID=cds-WP_038271191.1;Parent=gene-LPH58_RS07305;Dbxref=Genbank:WP_038271191.1;Name=WP_038271191.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503177.1;locus_tag=LPH58_RS07305;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_038271191.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1655563 1656372 . - . ID=gene-LPH58_RS07310;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LPH58_RS07310;old_locus_tag=LPH58_07310 NZ_CP087690.1 Protein Homology CDS 1655563 1656372 . - 0 ID=cds-WP_038271190.1;Parent=gene-LPH58_RS07310;Dbxref=Genbank:WP_038271190.1;Name=WP_038271190.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083405.1;locus_tag=LPH58_RS07310;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_038271190.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1656369 1656971 . - . ID=gene-LPH58_RS07315;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LPH58_RS07315;old_locus_tag=LPH58_07315 NZ_CP087690.1 Protein Homology CDS 1656369 1656971 . - 0 ID=cds-WP_038271189.1;Parent=gene-LPH58_RS07315;Dbxref=Genbank:WP_038271189.1;Name=WP_038271189.1;Ontology_term=GO:0000105,GO:0000107,GO:0016884;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019661417.1;locus_tag=LPH58_RS07315;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_038271189.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1656968 1658095 . - . ID=gene-LPH58_RS07320;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LPH58_RS07320;old_locus_tag=LPH58_07320 NZ_CP087690.1 Protein Homology CDS 1656968 1658095 . - 0 ID=cds-WP_038271188.1;Parent=gene-LPH58_RS07320;Dbxref=Genbank:WP_038271188.1;Name=WP_038271188.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571443.1;locus_tag=LPH58_RS07320;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_038271188.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1658092 1659189 . - . ID=gene-LPH58_RS07325;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LPH58_RS07325;old_locus_tag=LPH58_07325 NZ_CP087690.1 Protein Homology CDS 1658092 1659189 . - 0 ID=cds-WP_038271187.1;Parent=gene-LPH58_RS07325;Dbxref=Genbank:WP_038271187.1;Name=WP_038271187.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083408.1;locus_tag=LPH58_RS07325;product=histidinol-phosphate transaminase;protein_id=WP_038271187.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1659186 1660481 . - . ID=gene-LPH58_RS07330;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LPH58_RS07330;old_locus_tag=LPH58_07330 NZ_CP087690.1 Protein Homology CDS 1659186 1660481 . - 0 ID=cds-WP_038271186.1;Parent=gene-LPH58_RS07330;Dbxref=Genbank:WP_038271186.1;Name=WP_038271186.1;Ontology_term=GO:0000105,GO:0004399;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155317.1;locus_tag=LPH58_RS07330;product=histidinol dehydrogenase;protein_id=WP_038271186.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1660478 1661392 . - . ID=gene-LPH58_RS07335;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LPH58_RS07335;old_locus_tag=LPH58_07335 NZ_CP087690.1 Protein Homology CDS 1660478 1661392 . - 0 ID=cds-WP_038271185.1;Parent=gene-LPH58_RS07335;Dbxref=Genbank:WP_038271185.1;Name=WP_038271185.1;Ontology_term=GO:0000105,GO:0003879;gbkey=CDS;gene=hisG;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237692.1;locus_tag=LPH58_RS07335;product=ATP phosphoribosyltransferase;protein_id=WP_038271185.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1661402 1661728 . - . ID=gene-LPH58_RS07340;Name=LPH58_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07340;old_locus_tag=LPH58_07340 NZ_CP087690.1 Protein Homology CDS 1661402 1661728 . - 0 ID=cds-WP_038271184.1;Parent=gene-LPH58_RS07340;Dbxref=Genbank:WP_038271184.1;Name=WP_038271184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017908286.1;locus_tag=LPH58_RS07340;product=YerC/YecD family TrpR-related protein;protein_id=WP_038271184.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1662277 1662519 . - . ID=gene-LPH58_RS07345;Name=LPH58_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07345;old_locus_tag=LPH58_07345 NZ_CP087690.1 GeneMarkS-2+ CDS 1662277 1662519 . - 0 ID=cds-WP_038271183.1;Parent=gene-LPH58_RS07345;Dbxref=Genbank:WP_038271183.1;Name=WP_038271183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07345;product=hypothetical protein;protein_id=WP_038271183.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1662522 1663922 . - . ID=gene-LPH58_RS07350;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LPH58_RS07350;old_locus_tag=LPH58_07350 NZ_CP087690.1 Protein Homology CDS 1662522 1663922 . - 0 ID=cds-WP_038271182.1;Parent=gene-LPH58_RS07350;Dbxref=Genbank:WP_038271182.1;Name=WP_038271182.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851319.1;locus_tag=LPH58_RS07350;product=histidine--tRNA ligase;protein_id=WP_038271182.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1664286 1665578 . - . ID=gene-LPH58_RS07355;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LPH58_RS07355;old_locus_tag=LPH58_07355 NZ_CP087690.1 Protein Homology CDS 1664286 1665578 . - 0 ID=cds-WP_038271220.1;Parent=gene-LPH58_RS07355;Dbxref=Genbank:WP_038271220.1;Name=WP_038271220.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088310.1;locus_tag=LPH58_RS07355;product=threonine synthase;protein_id=WP_038271220.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1665630 1666598 . - . ID=gene-LPH58_RS07360;Name=LPH58_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07360;old_locus_tag=LPH58_07360 NZ_CP087690.1 Protein Homology CDS 1665630 1666598 . - 0 ID=cds-WP_038271181.1;Parent=gene-LPH58_RS07360;Dbxref=Genbank:WP_038271181.1;Name=WP_038271181.1;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894672.1;locus_tag=LPH58_RS07360;product=homoserine kinase;protein_id=WP_038271181.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1666595 1669102 . - . ID=gene-LPH58_RS07365;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=LPH58_RS07365;old_locus_tag=LPH58_07365 NZ_CP087690.1 Protein Homology CDS 1666595 1669102 . - 0 ID=cds-WP_051482310.1;Parent=gene-LPH58_RS07365;Dbxref=Genbank:WP_051482310.1;Name=WP_051482310.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851316.1;locus_tag=LPH58_RS07365;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_051482310.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1669193 1669378 . - . ID=gene-LPH58_RS07370;Name=LPH58_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07370;old_locus_tag=LPH58_07370 NZ_CP087690.1 GeneMarkS-2+ CDS 1669193 1669378 . - 0 ID=cds-WP_152536612.1;Parent=gene-LPH58_RS07370;Dbxref=Genbank:WP_152536612.1;Name=WP_152536612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07370;product=hypothetical protein;protein_id=WP_152536612.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1669593 1670531 . - . ID=gene-LPH58_RS07375;Name=LPH58_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07375;old_locus_tag=LPH58_07375 NZ_CP087690.1 Protein Homology CDS 1669593 1670531 . - 0 ID=cds-WP_038271179.1;Parent=gene-LPH58_RS07375;Dbxref=Genbank:WP_038271179.1;Name=WP_038271179.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088307.1;locus_tag=LPH58_RS07375;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_038271179.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1670559 1671026 . - . ID=gene-LPH58_RS07380;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LPH58_RS07380;old_locus_tag=LPH58_07380 NZ_CP087690.1 Protein Homology CDS 1670559 1671026 . - 0 ID=cds-WP_038271178.1;Parent=gene-LPH58_RS07380;Dbxref=Genbank:WP_038271178.1;Name=WP_038271178.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302529.1;locus_tag=LPH58_RS07380;product=Holliday junction resolvase RuvX;protein_id=WP_038271178.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1671019 1671585 . - . ID=gene-LPH58_RS07385;Name=LPH58_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07385;old_locus_tag=LPH58_07385 NZ_CP087690.1 Protein Homology CDS 1671019 1671585 . - 0 ID=cds-WP_038271177.1;Parent=gene-LPH58_RS07385;Dbxref=Genbank:WP_038271177.1;Name=WP_038271177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851314.1;locus_tag=LPH58_RS07385;product=YqgE/AlgH family protein;protein_id=WP_038271177.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1672081 1673265 . - . ID=gene-LPH58_RS07390;Name=LPH58_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07390;old_locus_tag=LPH58_07390 NZ_CP087690.1 Protein Homology CDS 1672081 1673265 . - 0 ID=cds-WP_038271175.1;Parent=gene-LPH58_RS07390;Dbxref=Genbank:WP_038271175.1;Name=WP_038271175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115444.1;locus_tag=LPH58_RS07390;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_038271175.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1674319 1676571 . - . ID=gene-LPH58_RS07395;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LPH58_RS07395;old_locus_tag=LPH58_07395 NZ_CP087690.1 Protein Homology CDS 1674319 1676571 . - 0 ID=cds-WP_114867156.1;Parent=gene-LPH58_RS07395;Dbxref=Genbank:WP_114867156.1;Name=WP_114867156.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851311.1;locus_tag=LPH58_RS07395;product=catalase/peroxidase HPI;protein_id=WP_114867156.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1677043 1677921 . - . ID=gene-LPH58_RS07400;Name=LPH58_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07400;old_locus_tag=LPH58_07400 NZ_CP087690.1 Protein Homology CDS 1677043 1677921 . - 0 ID=cds-WP_038271173.1;Parent=gene-LPH58_RS07400;Dbxref=Genbank:WP_038271173.1;Name=WP_038271173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012446026.1;locus_tag=LPH58_RS07400;product=J domain-containing protein;protein_id=WP_038271173.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1678073 1678546 . - . ID=gene-LPH58_RS07405;Name=LPH58_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07405;old_locus_tag=LPH58_07405 NZ_CP087690.1 Protein Homology CDS 1678073 1678546 . - 0 ID=cds-WP_038271172.1;Parent=gene-LPH58_RS07405;Dbxref=Genbank:WP_038271172.1;Name=WP_038271172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894682.1;locus_tag=LPH58_RS07405;product=Hsp20/alpha crystallin family protein;protein_id=WP_038271172.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1679202 1681586 . - . ID=gene-LPH58_RS07410;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LPH58_RS07410;old_locus_tag=LPH58_07410 NZ_CP087690.1 Protein Homology CDS 1679202 1681586 . - 0 ID=cds-WP_038271170.1;Parent=gene-LPH58_RS07410;Dbxref=Genbank:WP_038271170.1;Name=WP_038271170.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083423.1;locus_tag=LPH58_RS07410;product=penicillin-binding protein 1C;protein_id=WP_038271170.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1681780 1681902 . - . ID=gene-LPH58_RS11985;Name=LPH58_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11985 NZ_CP087690.1 GeneMarkS-2+ CDS 1681780 1681902 . - 0 ID=cds-WP_267903153.1;Parent=gene-LPH58_RS11985;Dbxref=Genbank:WP_267903153.1;Name=WP_267903153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11985;product=hypothetical protein;protein_id=WP_267903153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1683521 1686403 . + . ID=gene-LPH58_RS07415;Name=LPH58_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07415;old_locus_tag=LPH58_07415 NZ_CP087690.1 Protein Homology CDS 1683521 1686403 . + 0 ID=cds-WP_038271168.1;Parent=gene-LPH58_RS07415;Dbxref=Genbank:WP_038271168.1;Name=WP_038271168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083424.1;locus_tag=LPH58_RS07415;product=TonB-dependent receptor;protein_id=WP_038271168.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1686509 1687046 . - . ID=gene-LPH58_RS07420;Name=LPH58_RS07420;end_range=1687046,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS07420;old_locus_tag=LPH58_07420;partial=true;pseudo=true;start_range=.,1686509 NZ_CP087690.1 Protein Homology CDS 1686509 1687046 . - 0 ID=cds-LPH58_RS07420;Parent=gene-LPH58_RS07420;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006631,GO:0016491,GO:0016616;end_range=1687046,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005931134.1;locus_tag=LPH58_RS07420;partial=true;product=3-hydroxyacyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,1686509;transl_table=11 NZ_CP087690.1 RefSeq gene 1687635 1687865 . - . ID=gene-LPH58_RS07425;Name=LPH58_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07425;old_locus_tag=LPH58_07425 NZ_CP087690.1 GeneMarkS-2+ CDS 1687635 1687865 . - 0 ID=cds-WP_051482308.1;Parent=gene-LPH58_RS07425;Dbxref=Genbank:WP_051482308.1;Name=WP_051482308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07425;product=hypothetical protein;protein_id=WP_051482308.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1687862 1688029 . - . ID=gene-LPH58_RS07430;Name=LPH58_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07430;old_locus_tag=LPH58_07430 NZ_CP087690.1 GeneMarkS-2+ CDS 1687862 1688029 . - 0 ID=cds-WP_160165168.1;Parent=gene-LPH58_RS07430;Dbxref=Genbank:WP_160165168.1;Name=WP_160165168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07430;product=hypothetical protein;protein_id=WP_160165168.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1688206 1688826 . + . ID=gene-LPH58_RS07435;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LPH58_RS07435;old_locus_tag=LPH58_07435 NZ_CP087690.1 Protein Homology CDS 1688206 1688826 . + 0 ID=cds-WP_038271167.1;Parent=gene-LPH58_RS07435;Dbxref=Genbank:WP_038271167.1;Name=WP_038271167.1;Ontology_term=GO:0006352,GO:0006979,GO:0016987,GO:0005737;gbkey=CDS;gene=rpoE;go_component=cytoplasm|0005737||IEA;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962205.1;locus_tag=LPH58_RS07435;product=RNA polymerase sigma factor RpoE;protein_id=WP_038271167.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1688823 1689563 . + . ID=gene-LPH58_RS07440;Name=LPH58_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07440;old_locus_tag=LPH58_07440 NZ_CP087690.1 Protein Homology CDS 1688823 1689563 . + 0 ID=cds-WP_038271166.1;Parent=gene-LPH58_RS07440;Dbxref=Genbank:WP_038271166.1;Name=WP_038271166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083426.1;locus_tag=LPH58_RS07440;product=sigma-E factor negative regulatory protein;protein_id=WP_038271166.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1689671 1691215 . + . ID=gene-LPH58_RS07445;Name=LPH58_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07445;old_locus_tag=LPH58_07445 NZ_CP087690.1 Protein Homology CDS 1689671 1691215 . + 0 ID=cds-WP_038271165.1;Parent=gene-LPH58_RS07445;Dbxref=Genbank:WP_038271165.1;Name=WP_038271165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017160027.1;locus_tag=LPH58_RS07445;product=DegQ family serine endoprotease;protein_id=WP_038271165.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1691396 1693204 . + . ID=gene-LPH58_RS07450;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LPH58_RS07450;old_locus_tag=LPH58_07450 NZ_CP087690.1 Protein Homology CDS 1691396 1693204 . + 0 ID=cds-WP_114867221.1;Parent=gene-LPH58_RS07450;Dbxref=Genbank:WP_114867221.1;Name=WP_114867221.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083428.1;locus_tag=LPH58_RS07450;product=translation elongation factor 4;protein_id=WP_114867221.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1693307 1694101 . + . ID=gene-LPH58_RS07455;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LPH58_RS07455;old_locus_tag=LPH58_07455 NZ_CP087690.1 Protein Homology CDS 1693307 1694101 . + 0 ID=cds-WP_038271164.1;Parent=gene-LPH58_RS07455;Dbxref=Genbank:WP_038271164.1;Name=WP_038271164.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852731.1;locus_tag=LPH58_RS07455;product=signal peptidase I;protein_id=WP_038271164.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1694312 1694497 . + . ID=gene-LPH58_RS07460;Name=LPH58_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07460;old_locus_tag=LPH58_07460 NZ_CP087690.1 Protein Homology CDS 1694312 1694497 . + 0 ID=cds-WP_230428223.1;Parent=gene-LPH58_RS07460;Dbxref=Genbank:WP_230428223.1;Name=WP_230428223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027463.2;locus_tag=LPH58_RS07460;product=DUF4845 domain-containing protein;protein_id=WP_230428223.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1694484 1695167 . + . ID=gene-LPH58_RS07465;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LPH58_RS07465;old_locus_tag=LPH58_07465 NZ_CP087690.1 Protein Homology CDS 1694484 1695167 . + 0 ID=cds-WP_038271163.1;Parent=gene-LPH58_RS07465;Dbxref=Genbank:WP_038271163.1;Name=WP_038271163.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083431.1;locus_tag=LPH58_RS07465;product=ribonuclease III;protein_id=WP_038271163.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1695164 1696060 . + . ID=gene-LPH58_RS07470;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LPH58_RS07470;old_locus_tag=LPH58_07470 NZ_CP087690.1 Protein Homology CDS 1695164 1696060 . + 0 ID=cds-WP_038271162.1;Parent=gene-LPH58_RS07470;Dbxref=Genbank:WP_038271162.1;Name=WP_038271162.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098038.1;locus_tag=LPH58_RS07470;product=GTPase Era;protein_id=WP_038271162.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1696280 1697026 . + . ID=gene-LPH58_RS07475;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LPH58_RS07475;old_locus_tag=LPH58_07475 NZ_CP087690.1 Protein Homology CDS 1696280 1697026 . + 0 ID=cds-WP_051482307.1;Parent=gene-LPH58_RS07475;Dbxref=Genbank:WP_051482307.1;Name=WP_051482307.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300430.1;locus_tag=LPH58_RS07475;product=DNA repair protein RecO;protein_id=WP_051482307.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1697135 1699042 . - . ID=gene-LPH58_RS07480;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LPH58_RS07480;old_locus_tag=LPH58_07480 NZ_CP087690.1 Protein Homology CDS 1697135 1699042 . - 0 ID=cds-WP_038271161.1;Parent=gene-LPH58_RS07480;Dbxref=Genbank:WP_038271161.1;Name=WP_038271161.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088288.1;locus_tag=LPH58_RS07480;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_038271161.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1699933 1700100 . + . ID=gene-LPH58_RS07485;Name=LPH58_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07485;old_locus_tag=LPH58_07485 NZ_CP087690.1 GeneMarkS-2+ CDS 1699933 1700100 . + 0 ID=cds-WP_160165167.1;Parent=gene-LPH58_RS07485;Dbxref=Genbank:WP_160165167.1;Name=WP_160165167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07485;product=hypothetical protein;protein_id=WP_160165167.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1700404 1702143 . - . ID=gene-LPH58_RS07490;Name=LPH58_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07490;old_locus_tag=LPH58_07490 NZ_CP087690.1 Protein Homology CDS 1700404 1702143 . - 0 ID=cds-WP_038271160.1;Parent=gene-LPH58_RS07490;Dbxref=Genbank:WP_038271160.1;Name=WP_038271160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894699.1;locus_tag=LPH58_RS07490;product=cation acetate symporter;protein_id=WP_038271160.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1702140 1702457 . - . ID=gene-LPH58_RS07495;Name=LPH58_RS07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07495;old_locus_tag=LPH58_07495 NZ_CP087690.1 Protein Homology CDS 1702140 1702457 . - 0 ID=cds-WP_038271159.1;Parent=gene-LPH58_RS07495;Dbxref=Genbank:WP_038271159.1;Name=WP_038271159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451668.1;locus_tag=LPH58_RS07495;product=DUF485 domain-containing protein;protein_id=WP_038271159.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1703235 1705178 . + . ID=gene-LPH58_RS07500;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LPH58_RS07500;old_locus_tag=LPH58_07500 NZ_CP087690.1 Protein Homology CDS 1703235 1705178 . + 0 ID=cds-WP_038271158.1;Parent=gene-LPH58_RS07500;Dbxref=Genbank:WP_038271158.1;Name=WP_038271158.1;Ontology_term=GO:0019427,GO:0003987;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852028.1;locus_tag=LPH58_RS07500;product=acetate--CoA ligase;protein_id=WP_038271158.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1706183 1706767 . + . ID=gene-LPH58_RS07505;Name=LPH58_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07505;old_locus_tag=LPH58_07505 NZ_CP087690.1 Protein Homology CDS 1706183 1706767 . + 0 ID=cds-WP_038271157.1;Parent=gene-LPH58_RS07505;Dbxref=Genbank:WP_038271157.1;Name=WP_038271157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019337938.1;locus_tag=LPH58_RS07505;product=manganese efflux pump MntP family protein;protein_id=WP_038271157.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1708134 1709003 . - . ID=gene-LPH58_RS07510;Name=LPH58_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07510;old_locus_tag=LPH58_07510 NZ_CP087690.1 Protein Homology CDS 1708134 1709003 . - 0 ID=cds-WP_038271155.1;Parent=gene-LPH58_RS07510;Dbxref=Genbank:WP_038271155.1;Name=WP_038271155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.2;locus_tag=LPH58_RS07510;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_038271155.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1709006 1709356 . - . ID=gene-LPH58_RS07515;Name=LPH58_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07515;old_locus_tag=LPH58_07515 NZ_CP087690.1 GeneMarkS-2+ CDS 1709006 1709356 . - 0 ID=cds-WP_152536610.1;Parent=gene-LPH58_RS07515;Dbxref=Genbank:WP_152536610.1;Name=WP_152536610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07515;product=hypothetical protein;protein_id=WP_152536610.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1709921 1710382 . + . ID=gene-LPH58_RS07520;Name=LPH58_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07520;old_locus_tag=LPH58_07520 NZ_CP087690.1 Protein Homology CDS 1709921 1710382 . + 0 ID=cds-WP_201745846.1;Parent=gene-LPH58_RS07520;Dbxref=Genbank:WP_201745846.1;Name=WP_201745846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382662.1;locus_tag=LPH58_RS07520;product=hypothetical protein;protein_id=WP_201745846.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1711446 1713362 . + . ID=gene-LPH58_RS07525;Name=LPH58_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07525;old_locus_tag=LPH58_07525 NZ_CP087690.1 Protein Homology CDS 1711446 1713362 . + 0 ID=cds-WP_081755433.1;Parent=gene-LPH58_RS07525;Dbxref=Genbank:WP_081755433.1;Name=WP_081755433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382663.1;locus_tag=LPH58_RS07525;product=PQQ-binding-like beta-propeller repeat protein;protein_id=WP_081755433.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1713852 1715918 . - . ID=gene-LPH58_RS07530;Name=LPH58_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07530;old_locus_tag=LPH58_07530 NZ_CP087690.1 Protein Homology CDS 1713852 1715918 . - 0 ID=cds-WP_038271153.1;Parent=gene-LPH58_RS07530;Dbxref=Genbank:WP_038271153.1;Name=WP_038271153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169463.1;locus_tag=LPH58_RS07530;product=S9 family peptidase;protein_id=WP_038271153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1716345 1718315 . - . ID=gene-LPH58_RS07535;Name=LPH58_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07535;old_locus_tag=LPH58_07535 NZ_CP087690.1 Protein Homology CDS 1716345 1718315 . - 0 ID=cds-WP_038271152.1;Parent=gene-LPH58_RS07535;Dbxref=Genbank:WP_038271152.1;Name=WP_038271152.1;Ontology_term=GO:0006857,GO:0035673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oligopeptide transmembrane transporter activity|0035673||IEA;go_process=oligopeptide transport|0006857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011346708.1;locus_tag=LPH58_RS07535;product=oligopeptide transporter%2C OPT family;protein_id=WP_038271152.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1718352 1718483 . - . ID=gene-LPH58_RS11990;Name=LPH58_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11990 NZ_CP087690.1 GeneMarkS-2+ CDS 1718352 1718483 . - 0 ID=cds-WP_267903154.1;Parent=gene-LPH58_RS11990;Dbxref=Genbank:WP_267903154.1;Name=WP_267903154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11990;product=hypothetical protein;protein_id=WP_267903154.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1720120 1721643 . + . ID=gene-LPH58_RS07540;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LPH58_RS07540;old_locus_tag=LPH58_07540 NZ_CP087690.1 Protein Homology CDS 1720120 1721643 . + 0 ID=cds-WP_230433936.1;Parent=gene-LPH58_RS07540;Dbxref=Genbank:WP_230433936.1;Name=WP_230433936.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894714.1;locus_tag=LPH58_RS07540;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_230433936.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1721731 1722558 . + . ID=gene-LPH58_RS07545;Name=LPH58_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07545;old_locus_tag=LPH58_07545 NZ_CP087690.1 Protein Homology CDS 1721731 1722558 . + 0 ID=cds-WP_038271150.1;Parent=gene-LPH58_RS07545;Dbxref=Genbank:WP_038271150.1;Name=WP_038271150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083443.1;locus_tag=LPH58_RS07545;product=aquaporin family protein;protein_id=WP_038271150.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1722613 1724112 . + . ID=gene-LPH58_RS07550;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LPH58_RS07550;old_locus_tag=LPH58_07550 NZ_CP087690.1 Protein Homology CDS 1722613 1724112 . + 0 ID=cds-WP_038271149.1;Parent=gene-LPH58_RS07550;Dbxref=Genbank:WP_038271149.1;Name=WP_038271149.1;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368988.1;locus_tag=LPH58_RS07550;product=glycerol kinase GlpK;protein_id=WP_038271149.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1724946 1725713 . - . ID=gene-LPH58_RS07555;Name=LPH58_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07555;old_locus_tag=LPH58_07555 NZ_CP087690.1 Protein Homology CDS 1724946 1725713 . - 0 ID=cds-WP_038271148.1;Parent=gene-LPH58_RS07555;Dbxref=Genbank:WP_038271148.1;Name=WP_038271148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903483.1;locus_tag=LPH58_RS07555;product=coniferyl-alcohol dehydrogenase;protein_id=WP_038271148.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1726040 1726930 . + . ID=gene-LPH58_RS07560;Name=LPH58_RS07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS07560;old_locus_tag=LPH58_07560;partial=true;pseudo=true;start_range=.,1726040 NZ_CP087690.1 Protein Homology CDS 1726040 1726930 . + 0 ID=cds-LPH58_RS07560;Parent=gene-LPH58_RS07560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574667.1;locus_tag=LPH58_RS07560;partial=true;product=D-hexose-6-phosphate mutarotase;pseudo=true;start_range=.,1726040;transl_table=11 NZ_CP087690.1 RefSeq gene 1727563 1729839 . + . ID=gene-LPH58_RS07565;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LPH58_RS07565;old_locus_tag=LPH58_07565 NZ_CP087690.1 Protein Homology CDS 1727563 1729839 . + 0 ID=cds-WP_038271147.1;Parent=gene-LPH58_RS07565;Dbxref=Genbank:WP_038271147.1;Name=WP_038271147.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894720.1;locus_tag=LPH58_RS07565;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_038271147.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1729904 1730614 . + . ID=gene-LPH58_RS07570;Name=LPH58_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07570;old_locus_tag=LPH58_07570 NZ_CP087690.1 Protein Homology CDS 1729904 1730614 . + 0 ID=cds-WP_051482305.1;Parent=gene-LPH58_RS07570;Dbxref=Genbank:WP_051482305.1;Name=WP_051482305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017356868.1;locus_tag=LPH58_RS07570;product=epoxyqueuosine reductase QueH;protein_id=WP_051482305.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1730636 1730852 . + . ID=gene-LPH58_RS07575;Name=LPH58_RS07575;end_range=1730852,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS07575;old_locus_tag=LPH58_07575;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 1730636 1730852 . + 0 ID=cds-LPH58_RS07575;Parent=gene-LPH58_RS07575;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1730852,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083449.1;locus_tag=LPH58_RS07575;partial=true;product=isochorismatase family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1730849 1732495 . - . ID=gene-LPH58_RS07580;Name=LPH58_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07580;old_locus_tag=LPH58_07580 NZ_CP087690.1 Protein Homology CDS 1730849 1732495 . - 0 ID=cds-WP_038271146.1;Parent=gene-LPH58_RS07580;Dbxref=Genbank:WP_038271146.1;Name=WP_038271146.1;Ontology_term=GO:0006631,GO:0031956;gbkey=CDS;go_function=medium-chain fatty acid-CoA ligase activity|0031956||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852012.1;locus_tag=LPH58_RS07580;product=fatty acid CoA ligase family protein;protein_id=WP_038271146.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1733471 1733794 . - . ID=gene-LPH58_RS07585;Name=LPH58_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07585;old_locus_tag=LPH58_07585 NZ_CP087690.1 Protein Homology CDS 1733471 1733794 . - 0 ID=cds-WP_171898085.1;Parent=gene-LPH58_RS07585;Dbxref=Genbank:WP_171898085.1;Name=WP_171898085.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156759.1;locus_tag=LPH58_RS07585;product=lipid-A-disaccharide synthase N-terminal domain-containing protein;protein_id=WP_171898085.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1733796 1734518 . - . ID=gene-LPH58_RS07590;Name=LPH58_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07590;old_locus_tag=LPH58_07590 NZ_CP087690.1 Protein Homology CDS 1733796 1734518 . - 0 ID=cds-WP_038271143.1;Parent=gene-LPH58_RS07590;Dbxref=Genbank:WP_038271143.1;Name=WP_038271143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088269.1;locus_tag=LPH58_RS07590;product=glycosyltransferase;protein_id=WP_038271143.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1734599 1735564 . - . ID=gene-LPH58_RS07595;Name=LPH58_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07595;old_locus_tag=LPH58_07595 NZ_CP087690.1 Protein Homology CDS 1734599 1735564 . - 0 ID=cds-WP_038271142.1;Parent=gene-LPH58_RS07595;Dbxref=Genbank:WP_038271142.1;Name=WP_038271142.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017115470.1;locus_tag=LPH58_RS07595;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_038271142.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1735937 1736869 . - . ID=gene-LPH58_RS07600;Name=LPH58_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07600;old_locus_tag=LPH58_07600 NZ_CP087690.1 Protein Homology CDS 1735937 1736869 . - 0 ID=cds-WP_038271141.1;Parent=gene-LPH58_RS07600;Dbxref=Genbank:WP_038271141.1;Name=WP_038271141.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088267.1;locus_tag=LPH58_RS07600;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_038271141.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1736869 1737663 . - . ID=gene-LPH58_RS07605;Name=LPH58_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07605;old_locus_tag=LPH58_07605 NZ_CP087690.1 Protein Homology CDS 1736869 1737663 . - 0 ID=cds-WP_038271140.1;Parent=gene-LPH58_RS07605;Dbxref=Genbank:WP_038271140.1;Name=WP_038271140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088266.1;locus_tag=LPH58_RS07605;product=ParA family protein;protein_id=WP_038271140.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1738172 1738414 . - . ID=gene-LPH58_RS07610;Name=LPH58_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07610;old_locus_tag=LPH58_07610 NZ_CP087690.1 GeneMarkS-2+ CDS 1738172 1738414 . - 0 ID=cds-WP_152536608.1;Parent=gene-LPH58_RS07610;Dbxref=Genbank:WP_152536608.1;Name=WP_152536608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07610;product=hypothetical protein;protein_id=WP_152536608.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1739495 1740457 . - . ID=gene-LPH58_RS07615;Name=LPH58_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07615;old_locus_tag=LPH58_07615 NZ_CP087690.1 Protein Homology CDS 1739495 1740457 . - 0 ID=cds-WP_038271138.1;Parent=gene-LPH58_RS07615;Dbxref=Genbank:WP_038271138.1;Name=WP_038271138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083456.1;locus_tag=LPH58_RS07615;product=MBL fold metallo-hydrolase;protein_id=WP_038271138.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1741496 1742776 . - . ID=gene-LPH58_RS07620;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LPH58_RS07620;old_locus_tag=LPH58_07620 NZ_CP087690.1 Protein Homology CDS 1741496 1742776 . - 0 ID=cds-WP_038271137.1;Parent=gene-LPH58_RS07620;Dbxref=Genbank:WP_038271137.1;Name=WP_038271137.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083457.1;locus_tag=LPH58_RS07620;product=serine--tRNA ligase;protein_id=WP_038271137.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1742896 1743591 . + . ID=gene-LPH58_RS07625;Name=LPH58_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07625;old_locus_tag=LPH58_07625 NZ_CP087690.1 Protein Homology CDS 1742896 1743591 . + 0 ID=cds-WP_038271136.1;Parent=gene-LPH58_RS07625;Dbxref=Genbank:WP_038271136.1;Name=WP_038271136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852004.1;locus_tag=LPH58_RS07625;product=energy transducer TonB;protein_id=WP_038271136.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1744369 1745718 . - . ID=gene-LPH58_RS07630;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LPH58_RS07630;old_locus_tag=LPH58_07630 NZ_CP087690.1 Protein Homology CDS 1744369 1745718 . - 0 ID=cds-WP_038271135.1;Parent=gene-LPH58_RS07630;Dbxref=Genbank:WP_038271135.1;Name=WP_038271135.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091079.1;locus_tag=LPH58_RS07630;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_038271135.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1745807 1746901 . - . ID=gene-LPH58_RS07635;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LPH58_RS07635;old_locus_tag=LPH58_07635 NZ_CP087690.1 Protein Homology CDS 1745807 1746901 . - 0 ID=cds-WP_038271212.1;Parent=gene-LPH58_RS07635;Dbxref=Genbank:WP_038271212.1;Name=WP_038271212.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451090.1;locus_tag=LPH58_RS07635;product=prephenate dehydratase;protein_id=WP_038271212.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1747012 1748097 . - . ID=gene-LPH58_RS07640;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LPH58_RS07640;old_locus_tag=LPH58_07640 NZ_CP087690.1 Protein Homology CDS 1747012 1748097 . - 0 ID=cds-WP_038271211.1;Parent=gene-LPH58_RS07640;Dbxref=Genbank:WP_038271211.1;Name=WP_038271211.1;Ontology_term=GO:0006564,GO:0004648;gbkey=CDS;gene=serC;go_function=O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300927.1;locus_tag=LPH58_RS07640;product=phosphoserine transaminase;protein_id=WP_038271211.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1748771 1749838 . + . ID=gene-LPH58_RS07645;Name=LPH58_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07645;old_locus_tag=LPH58_07645 NZ_CP087690.1 Protein Homology CDS 1748771 1749838 . + 0 ID=cds-WP_051482304.1;Parent=gene-LPH58_RS07645;Dbxref=Genbank:WP_051482304.1;Name=WP_051482304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085874.1;locus_tag=LPH58_RS07645;product=energy transducer TonB;protein_id=WP_051482304.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1749937 1751121 . - . ID=gene-LPH58_RS07650;Name=LPH58_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07650;old_locus_tag=LPH58_07650 NZ_CP087690.1 Protein Homology CDS 1749937 1751121 . - 0 ID=cds-WP_038271134.1;Parent=gene-LPH58_RS07650;Dbxref=Genbank:WP_038271134.1;Name=WP_038271134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085873.1;locus_tag=LPH58_RS07650;product=ABC transporter permease;protein_id=WP_038271134.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1751118 1751864 . - . ID=gene-LPH58_RS07655;Name=LPH58_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07655;old_locus_tag=LPH58_07655 NZ_CP087690.1 Protein Homology CDS 1751118 1751864 . - 0 ID=cds-WP_038271133.1;Parent=gene-LPH58_RS07655;Dbxref=Genbank:WP_038271133.1;Name=WP_038271133.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039041.1;locus_tag=LPH58_RS07655;product=ATP-binding cassette domain-containing protein;protein_id=WP_038271133.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1751861 1753396 . - . ID=gene-LPH58_RS07660;Name=LPH58_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07660;old_locus_tag=LPH58_07660 NZ_CP087690.1 Protein Homology CDS 1751861 1753396 . - 0 ID=cds-WP_038271132.1;Parent=gene-LPH58_RS07660;Dbxref=Genbank:WP_038271132.1;Name=WP_038271132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004091066.1;locus_tag=LPH58_RS07660;product=alpha/beta hydrolase;protein_id=WP_038271132.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1754483 1755826 . + . ID=gene-LPH58_RS07665;Name=LPH58_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07665;old_locus_tag=LPH58_07665 NZ_CP087690.1 Protein Homology CDS 1754483 1755826 . + 0 ID=cds-WP_038271131.1;Parent=gene-LPH58_RS07665;Dbxref=Genbank:WP_038271131.1;Name=WP_038271131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097976.1;locus_tag=LPH58_RS07665;product=serine hydrolase domain-containing protein;protein_id=WP_038271131.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1755964 1756254 . - . ID=gene-LPH58_RS07670;Name=LPH58_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07670;old_locus_tag=LPH58_07670 NZ_CP087690.1 GeneMarkS-2+ CDS 1755964 1756254 . - 0 ID=cds-WP_114867158.1;Parent=gene-LPH58_RS07670;Dbxref=Genbank:WP_114867158.1;Name=WP_114867158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07670;product=hypothetical protein;protein_id=WP_114867158.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1756590 1757474 . - . ID=gene-LPH58_RS07675;Name=LPH58_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07675;old_locus_tag=LPH58_07675 NZ_CP087690.1 Protein Homology CDS 1756590 1757474 . - 0 ID=cds-WP_171898086.1;Parent=gene-LPH58_RS07675;Dbxref=Genbank:WP_171898086.1;Name=WP_171898086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005992724.1;locus_tag=LPH58_RS07675;product=hypothetical protein;protein_id=WP_171898086.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1757529 1758609 . + . ID=gene-LPH58_RS07680;Name=LPH58_RS07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS07680;old_locus_tag=LPH58_07680;pseudo=true NZ_CP087690.1 Protein Homology CDS 1757529 1758609 . + 0 ID=cds-LPH58_RS07680;Parent=gene-LPH58_RS07680;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260437.1;locus_tag=LPH58_RS07680;product=acetyl-CoA C-acyltransferase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1759803 1760420 . + . ID=gene-LPH58_RS07685;Name=LPH58_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07685;old_locus_tag=LPH58_07685 NZ_CP087690.1 Protein Homology CDS 1759803 1760420 . + 0 ID=cds-WP_038272558.1;Parent=gene-LPH58_RS07685;Dbxref=Genbank:WP_038272558.1;Name=WP_038272558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368710.1;locus_tag=LPH58_RS07685;product=TetR/AcrR family transcriptional regulator;protein_id=WP_038272558.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1761809 1762738 . + . ID=gene-LPH58_RS07690;Name=LPH58_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07690;old_locus_tag=LPH58_07690 NZ_CP087690.1 Protein Homology CDS 1761809 1762738 . + 0 ID=cds-WP_038272563.1;Parent=gene-LPH58_RS07690;Dbxref=Genbank:WP_038272563.1;Name=WP_038272563.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851692.1;locus_tag=LPH58_RS07690;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_038272563.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1763445 1764647 . - . ID=gene-LPH58_RS07695;Name=LPH58_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07695;old_locus_tag=LPH58_07695 NZ_CP087690.1 Protein Homology CDS 1763445 1764647 . - 0 ID=cds-WP_038272553.1;Parent=gene-LPH58_RS07695;Dbxref=Genbank:WP_038272553.1;Name=WP_038272553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051002.1;locus_tag=LPH58_RS07695;product=AGE family epimerase/isomerase;protein_id=WP_038272553.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1764644 1765636 . - . ID=gene-LPH58_RS07700;Name=LPH58_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07700;old_locus_tag=LPH58_07700 NZ_CP087690.1 Protein Homology CDS 1764644 1765636 . - 0 ID=cds-WP_038272551.1;Parent=gene-LPH58_RS07700;Dbxref=Genbank:WP_038272551.1;Name=WP_038272551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084974.1;locus_tag=LPH58_RS07700;product=carbohydrate kinase;protein_id=WP_038272551.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1765657 1766937 . - . ID=gene-LPH58_RS07705;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=LPH58_RS07705;old_locus_tag=LPH58_07705 NZ_CP087690.1 Protein Homology CDS 1765657 1766937 . - 0 ID=cds-WP_038272549.1;Parent=gene-LPH58_RS07705;Dbxref=Genbank:WP_038272549.1;Name=WP_038272549.1;Ontology_term=GO:0015756,GO:0015535,GO:0005886;gbkey=CDS;gene=fucP;go_component=plasma membrane|0005886||IEA;go_function=fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084976.1;locus_tag=LPH58_RS07705;product=L-fucose:H+ symporter permease;protein_id=WP_038272549.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1768740 1769375 . - . ID=gene-LPH58_RS07710;Name=LPH58_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07710;old_locus_tag=LPH58_07710 NZ_CP087690.1 Protein Homology CDS 1768740 1769375 . - 0 ID=cds-WP_038272544.1;Parent=gene-LPH58_RS07710;Dbxref=Genbank:WP_038272544.1;Name=WP_038272544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087331.1;locus_tag=LPH58_RS07710;product=DUF2058 domain-containing protein;protein_id=WP_038272544.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1769413 1769649 . - . ID=gene-LPH58_RS07715;Name=LPH58_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07715;old_locus_tag=LPH58_07715 NZ_CP087690.1 Protein Homology CDS 1769413 1769649 . - 0 ID=cds-WP_038272561.1;Parent=gene-LPH58_RS07715;Dbxref=Genbank:WP_038272561.1;Name=WP_038272561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087333.1;locus_tag=LPH58_RS07715;product=SlyX family protein;protein_id=WP_038272561.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1769642 1770994 . - . ID=gene-LPH58_RS07720;Name=LPH58_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07720;old_locus_tag=LPH58_07720 NZ_CP087690.1 Protein Homology CDS 1769642 1770994 . - 0 ID=cds-WP_038272542.1;Parent=gene-LPH58_RS07720;Dbxref=Genbank:WP_038272542.1;Name=WP_038272542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804407.1;locus_tag=LPH58_RS07720;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_038272542.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1771018 1771974 . - . ID=gene-LPH58_RS07725;Name=LPH58_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07725;old_locus_tag=LPH58_07725 NZ_CP087690.1 Protein Homology CDS 1771018 1771974 . - 0 ID=cds-WP_038272539.1;Parent=gene-LPH58_RS07725;Dbxref=Genbank:WP_038272539.1;Name=WP_038272539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015463036.1;locus_tag=LPH58_RS07725;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_038272539.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1772821 1773393 . - . ID=gene-LPH58_RS07730;Name=LPH58_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07730;old_locus_tag=LPH58_07730 NZ_CP087690.1 Protein Homology CDS 1772821 1773393 . - 0 ID=cds-WP_038272538.1;Parent=gene-LPH58_RS07730;Dbxref=Genbank:WP_038272538.1;Name=WP_038272538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097981.1;locus_tag=LPH58_RS07730;product=glutathione peroxidase;protein_id=WP_038272538.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1773971 1774147 . + . ID=gene-LPH58_RS07735;Name=LPH58_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07735;old_locus_tag=LPH58_07735 NZ_CP087690.1 GeneMarkS-2+ CDS 1773971 1774147 . + 0 ID=cds-WP_160165218.1;Parent=gene-LPH58_RS07735;Dbxref=Genbank:WP_160165218.1;Name=WP_160165218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07735;product=hypothetical protein;protein_id=WP_160165218.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1774144 1775019 . + . ID=gene-LPH58_RS07740;Name=LPH58_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07740;old_locus_tag=LPH58_07740 NZ_CP087690.1 Protein Homology CDS 1774144 1775019 . + 0 ID=cds-WP_038272536.1;Parent=gene-LPH58_RS07740;Dbxref=Genbank:WP_038272536.1;Name=WP_038272536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913764.1;locus_tag=LPH58_RS07740;product=ABC transporter ATP-binding protein;protein_id=WP_038272536.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1775016 1775984 . + . ID=gene-LPH58_RS07745;Name=LPH58_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07745;old_locus_tag=LPH58_07745 NZ_CP087690.1 Protein Homology CDS 1775016 1775984 . + 0 ID=cds-WP_038272533.1;Parent=gene-LPH58_RS07745;Dbxref=Genbank:WP_038272533.1;Name=WP_038272533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894098.1;locus_tag=LPH58_RS07745;product=hypothetical protein;protein_id=WP_038272533.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1776172 1776303 . - . ID=gene-LPH58_RS11995;Name=LPH58_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11995 NZ_CP087690.1 GeneMarkS-2+ CDS 1776172 1776303 . - 0 ID=cds-WP_267903155.1;Parent=gene-LPH58_RS11995;Dbxref=Genbank:WP_267903155.1;Name=WP_267903155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11995;product=hypothetical protein;protein_id=WP_267903155.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1777085 1777513 . + . ID=gene-LPH58_RS07750;Name=LPH58_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07750;old_locus_tag=LPH58_07750 NZ_CP087690.1 Protein Homology CDS 1777085 1777513 . + 0 ID=cds-WP_038272529.1;Parent=gene-LPH58_RS07750;Dbxref=Genbank:WP_038272529.1;Name=WP_038272529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852919.1;locus_tag=LPH58_RS07750;product=hypothetical protein;protein_id=WP_038272529.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1777719 1779125 . - . ID=gene-LPH58_RS07755;Name=LPH58_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07755;old_locus_tag=LPH58_07755 NZ_CP087690.1 Protein Homology CDS 1777719 1779125 . - 0 ID=cds-WP_038272527.1;Parent=gene-LPH58_RS07755;Dbxref=Genbank:WP_038272527.1;Name=WP_038272527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852308.1;locus_tag=LPH58_RS07755;product=class II fumarate hydratase;protein_id=WP_038272527.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1779600 1780967 . + . ID=gene-LPH58_RS07760;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LPH58_RS07760;old_locus_tag=LPH58_07760 NZ_CP087690.1 Protein Homology CDS 1779600 1780967 . + 0 ID=cds-WP_038272523.1;Parent=gene-LPH58_RS07760;Dbxref=Genbank:WP_038272523.1;Name=WP_038272523.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156796.1;locus_tag=LPH58_RS07760;product=adenylosuccinate lyase;protein_id=WP_038272523.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1781521 1782783 . + . ID=gene-LPH58_RS07765;Name=LPH58_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07765;old_locus_tag=LPH58_07765 NZ_CP087690.1 Protein Homology CDS 1781521 1782783 . + 0 ID=cds-WP_038272522.1;Parent=gene-LPH58_RS07765;Dbxref=Genbank:WP_038272522.1;Name=WP_038272522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337786.1;locus_tag=LPH58_RS07765;product=cupin domain-containing protein;protein_id=WP_038272522.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1784419 1787247 . + . ID=gene-LPH58_RS07770;Name=LPH58_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07770;old_locus_tag=LPH58_07770 NZ_CP087690.1 Protein Homology CDS 1784419 1787247 . + 0 ID=cds-WP_114867160.1;Parent=gene-LPH58_RS07770;Dbxref=Genbank:WP_114867160.1;Name=WP_114867160.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507330.1;locus_tag=LPH58_RS07770;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_114867160.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1787288 1788451 . + . ID=gene-LPH58_RS07775;Name=sucB;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=LPH58_RS07775;old_locus_tag=LPH58_07775 NZ_CP087690.1 Protein Homology CDS 1787288 1788451 . + 0 ID=cds-WP_038272655.1;Parent=gene-LPH58_RS07775;Dbxref=Genbank:WP_038272655.1;Name=WP_038272655.1;Ontology_term=GO:0006099,GO:0006554,GO:0004149,GO:0045252;gbkey=CDS;gene=sucB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,lysine catabolic process|0006554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572000.1;locus_tag=LPH58_RS07775;product=dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_038272655.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1788885 1790321 . + . ID=gene-LPH58_RS07780;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LPH58_RS07780;old_locus_tag=LPH58_07780 NZ_CP087690.1 Protein Homology CDS 1788885 1790321 . + 0 ID=cds-WP_038272654.1;Parent=gene-LPH58_RS07780;Dbxref=Genbank:WP_038272654.1;Name=WP_038272654.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017159046.1;locus_tag=LPH58_RS07780;product=dihydrolipoyl dehydrogenase;protein_id=WP_038272654.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1792431 1792892 . - . ID=gene-LPH58_RS07785;Name=LPH58_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07785;old_locus_tag=LPH58_07785 NZ_CP087690.1 Protein Homology CDS 1792431 1792892 . - 0 ID=cds-WP_038272652.1;Parent=gene-LPH58_RS07785;Dbxref=Genbank:WP_038272652.1;Name=WP_038272652.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303254.1;locus_tag=LPH58_RS07785;product=glycine zipper 2TM domain-containing protein;protein_id=WP_038272652.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1794239 1795039 . + . ID=gene-LPH58_RS07790;Name=LPH58_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07790;old_locus_tag=LPH58_07790 NZ_CP087690.1 Protein Homology CDS 1794239 1795039 . + 0 ID=cds-WP_038272649.1;Parent=gene-LPH58_RS07790;Dbxref=Genbank:WP_038272649.1;Name=WP_038272649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451918.1;locus_tag=LPH58_RS07790;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_038272649.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1796150 1796338 . - . ID=gene-LPH58_RS07795;Name=LPH58_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07795;old_locus_tag=LPH58_07795 NZ_CP087690.1 GeneMarkS-2+ CDS 1796150 1796338 . - 0 ID=cds-WP_038272642.1;Parent=gene-LPH58_RS07795;Dbxref=Genbank:WP_038272642.1;Name=WP_038272642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07795;product=hypothetical protein;protein_id=WP_038272642.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1796383 1796559 . - . ID=gene-LPH58_RS07800;Name=LPH58_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07800;old_locus_tag=LPH58_07800 NZ_CP087690.1 Protein Homology CDS 1796383 1796559 . - 0 ID=cds-WP_230428225.1;Parent=gene-LPH58_RS07800;Dbxref=Genbank:WP_230428225.1;Name=WP_230428225.1;Ontology_term=GO:0042742;gbkey=CDS;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607699.1;locus_tag=LPH58_RS07800;product=Blp family class II bacteriocin;protein_id=WP_230428225.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1797514 1798203 . - . ID=gene-LPH58_RS07805;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=LPH58_RS07805;old_locus_tag=LPH58_07805 NZ_CP087690.1 Protein Homology CDS 1797514 1798203 . - 0 ID=cds-WP_038272640.1;Parent=gene-LPH58_RS07805;Dbxref=Genbank:WP_038272640.1;Name=WP_038272640.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368067.1;locus_tag=LPH58_RS07805;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_038272640.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1798345 1799139 . + . ID=gene-LPH58_RS07810;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LPH58_RS07810;old_locus_tag=LPH58_07810 NZ_CP087690.1 Protein Homology CDS 1798345 1799139 . + 0 ID=cds-WP_038272638.1;Parent=gene-LPH58_RS07810;Dbxref=Genbank:WP_038272638.1;Name=WP_038272638.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411315.1;locus_tag=LPH58_RS07810;product=adenosylmethionine decarboxylase;protein_id=WP_038272638.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1799393 1800046 . - . ID=gene-LPH58_RS07815;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LPH58_RS07815;old_locus_tag=LPH58_07815 NZ_CP087690.1 Protein Homology CDS 1799393 1800046 . - 0 ID=cds-WP_038272659.1;Parent=gene-LPH58_RS07815;Dbxref=Genbank:WP_038272659.1;Name=WP_038272659.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097769.1;locus_tag=LPH58_RS07815;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_038272659.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1800215 1800643 . + . ID=gene-LPH58_RS07820;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LPH58_RS07820;old_locus_tag=LPH58_07820 NZ_CP087690.1 Protein Homology CDS 1800215 1800643 . + 0 ID=cds-WP_038272637.1;Parent=gene-LPH58_RS07820;Dbxref=Genbank:WP_038272637.1;Name=WP_038272637.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006451009.1;locus_tag=LPH58_RS07820;product=50S ribosomal protein L13;protein_id=WP_038272637.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1800647 1801039 . + . ID=gene-LPH58_RS07825;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LPH58_RS07825;old_locus_tag=LPH58_07825 NZ_CP087690.1 Protein Homology CDS 1800647 1801039 . + 0 ID=cds-WP_038272635.1;Parent=gene-LPH58_RS07825;Dbxref=Genbank:WP_038272635.1;Name=WP_038272635.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083670.1;locus_tag=LPH58_RS07825;product=30S ribosomal protein S9;protein_id=WP_038272635.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1801163 1802482 . - . ID=gene-LPH58_RS07830;Name=LPH58_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07830;old_locus_tag=LPH58_07830 NZ_CP087690.1 Protein Homology CDS 1801163 1802482 . - 0 ID=cds-WP_038272633.1;Parent=gene-LPH58_RS07830;Dbxref=Genbank:WP_038272633.1;Name=WP_038272633.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156870.1;locus_tag=LPH58_RS07830;product=citrate synthase;protein_id=WP_038272633.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1802709 1802951 . - . ID=gene-LPH58_RS07835;Name=LPH58_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07835;old_locus_tag=LPH58_07835 NZ_CP087690.1 Protein Homology CDS 1802709 1802951 . - 0 ID=cds-WP_038272630.1;Parent=gene-LPH58_RS07835;Dbxref=Genbank:WP_038272630.1;Name=WP_038272630.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087863.1;locus_tag=LPH58_RS07835;product=type B 50S ribosomal protein L31;protein_id=WP_038272630.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1803652 1804353 . - . ID=gene-LPH58_RS07840;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LPH58_RS07840;old_locus_tag=LPH58_07840 NZ_CP087690.1 Protein Homology CDS 1803652 1804353 . - 0 ID=cds-WP_038272628.1;Parent=gene-LPH58_RS07840;Dbxref=Genbank:WP_038272628.1;Name=WP_038272628.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010375169.1;locus_tag=LPH58_RS07840;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_038272628.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1804632 1805567 . - . ID=gene-LPH58_RS07845;Name=LPH58_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07845;old_locus_tag=LPH58_07845 NZ_CP087690.1 Protein Homology CDS 1804632 1805567 . - 0 ID=cds-WP_038272625.1;Parent=gene-LPH58_RS07845;Dbxref=Genbank:WP_038272625.1;Name=WP_038272625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083674.1;locus_tag=LPH58_RS07845;product=LysR substrate-binding domain-containing protein;protein_id=WP_038272625.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1805672 1807261 . - . ID=gene-LPH58_RS07850;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LPH58_RS07850;old_locus_tag=LPH58_07850 NZ_CP087690.1 Protein Homology CDS 1805672 1807261 . - 0 ID=cds-WP_038272622.1;Parent=gene-LPH58_RS07850;Dbxref=Genbank:WP_038272622.1;Name=WP_038272622.1;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488827.1;locus_tag=LPH58_RS07850;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_038272622.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1807449 1808009 . - . ID=gene-LPH58_RS07855;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LPH58_RS07855;old_locus_tag=LPH58_07855 NZ_CP087690.1 Protein Homology CDS 1807449 1808009 . - 0 ID=cds-WP_038272620.1;Parent=gene-LPH58_RS07855;Dbxref=Genbank:WP_038272620.1;Name=WP_038272620.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=LPH58_RS07855;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_038272620.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1808472 1816358 . - . ID=gene-LPH58_RS07860;Name=LPH58_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07860;old_locus_tag=LPH58_07860 NZ_CP087690.1 Protein Homology CDS 1808472 1816358 . - 0 ID=cds-WP_171898087.1;Parent=gene-LPH58_RS07860;Dbxref=Genbank:WP_171898087.1;Name=WP_171898087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083677.1;locus_tag=LPH58_RS07860;product=YadA-like family protein;protein_id=WP_171898087.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1817150 1819444 . - . ID=gene-LPH58_RS07865;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LPH58_RS07865;old_locus_tag=LPH58_07865 NZ_CP087690.1 Protein Homology CDS 1817150 1819444 . - 0 ID=cds-WP_038272922.1;Parent=gene-LPH58_RS07865;Dbxref=Genbank:WP_038272922.1;Name=WP_038272922.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851910.1;locus_tag=LPH58_RS07865;product=type II secretion system secretin GspD;protein_id=WP_038272922.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1819486 1820301 . - . ID=gene-LPH58_RS07870;Name=LPH58_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07870;old_locus_tag=LPH58_07870 NZ_CP087690.1 Protein Homology CDS 1819486 1820301 . - 0 ID=cds-WP_038272921.1;Parent=gene-LPH58_RS07870;Dbxref=Genbank:WP_038272921.1;Name=WP_038272921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851909.1;locus_tag=LPH58_RS07870;product=hypothetical protein;protein_id=WP_038272921.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1820291 1820923 . - . ID=gene-LPH58_RS07875;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LPH58_RS07875;old_locus_tag=LPH58_07875 NZ_CP087690.1 Protein Homology CDS 1820291 1820923 . - 0 ID=cds-WP_038272918.1;Parent=gene-LPH58_RS07875;Dbxref=Genbank:WP_038272918.1;Name=WP_038272918.1;gbkey=CDS;gene=gspM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083680.1;locus_tag=LPH58_RS07875;product=type II secretion system protein GspM;protein_id=WP_038272918.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1820904 1822031 . - . ID=gene-LPH58_RS07880;Name=LPH58_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07880;old_locus_tag=LPH58_07880 NZ_CP087690.1 Protein Homology CDS 1820904 1822031 . - 0 ID=cds-WP_038272917.1;Parent=gene-LPH58_RS07880;Dbxref=Genbank:WP_038272917.1;Name=WP_038272917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035907.1;locus_tag=LPH58_RS07880;product=PilN domain-containing protein;protein_id=WP_038272917.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1822028 1822318 . - . ID=gene-LPH58_RS07885;Name=LPH58_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07885;old_locus_tag=LPH58_07885 NZ_CP087690.1 GeneMarkS-2+ CDS 1822028 1822318 . - 0 ID=cds-WP_114867163.1;Parent=gene-LPH58_RS07885;Dbxref=Genbank:WP_114867163.1;Name=WP_114867163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07885;product=general secretion pathway protein GspK;protein_id=WP_114867163.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1822564 1822707 . - . ID=gene-LPH58_RS07890;Name=LPH58_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07890;old_locus_tag=LPH58_07890 NZ_CP087690.1 GeneMarkS-2+ CDS 1822564 1822707 . - 0 ID=cds-WP_230428226.1;Parent=gene-LPH58_RS07890;Dbxref=Genbank:WP_230428226.1;Name=WP_230428226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS07890;product=hypothetical protein;protein_id=WP_230428226.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1822740 1823585 . - . ID=gene-LPH58_RS07895;Name=LPH58_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07895;old_locus_tag=LPH58_07895 NZ_CP087690.1 Protein Homology CDS 1822740 1823585 . - 0 ID=cds-WP_038272913.1;Parent=gene-LPH58_RS07895;Dbxref=Genbank:WP_038272913.1;Name=WP_038272913.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158144.1;locus_tag=LPH58_RS07895;product=type II secretion system protein GspK;protein_id=WP_038272913.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1823585 1824211 . - . ID=gene-LPH58_RS07900;Name=LPH58_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07900;old_locus_tag=LPH58_07900 NZ_CP087690.1 Protein Homology CDS 1823585 1824211 . - 0 ID=cds-WP_038272911.1;Parent=gene-LPH58_RS07900;Dbxref=Genbank:WP_038272911.1;Name=WP_038272911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852924.1;locus_tag=LPH58_RS07900;product=type II secretion system protein J;protein_id=WP_038272911.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1824208 1824606 . - . ID=gene-LPH58_RS07905;Name=LPH58_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07905;old_locus_tag=LPH58_07905 NZ_CP087690.1 Protein Homology CDS 1824208 1824606 . - 0 ID=cds-WP_038272909.1;Parent=gene-LPH58_RS07905;Dbxref=Genbank:WP_038272909.1;Name=WP_038272909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158146.1;locus_tag=LPH58_RS07905;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=WP_038272909.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1824603 1825058 . - . ID=gene-LPH58_RS07910;Name=LPH58_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07910;old_locus_tag=LPH58_07910 NZ_CP087690.1 Protein Homology CDS 1824603 1825058 . - 0 ID=cds-WP_114867164.1;Parent=gene-LPH58_RS07910;Dbxref=Genbank:WP_114867164.1;Name=WP_114867164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894021.1;locus_tag=LPH58_RS07910;product=type II secretion system protein GspH;protein_id=WP_114867164.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1825115 1825549 . - . ID=gene-LPH58_RS07915;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LPH58_RS07915;old_locus_tag=LPH58_07915 NZ_CP087690.1 Protein Homology CDS 1825115 1825549 . - 0 ID=cds-WP_038272904.1;Parent=gene-LPH58_RS07915;Dbxref=Genbank:WP_038272904.1;Name=WP_038272904.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088955.1;locus_tag=LPH58_RS07915;product=type II secretion system major pseudopilin GspG;protein_id=WP_038272904.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1825714 1826931 . - . ID=gene-LPH58_RS07920;Name=LPH58_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07920;old_locus_tag=LPH58_07920 NZ_CP087690.1 Protein Homology CDS 1825714 1826931 . - 0 ID=cds-WP_038272902.1;Parent=gene-LPH58_RS07920;Dbxref=Genbank:WP_038272902.1;Name=WP_038272902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504592.1;locus_tag=LPH58_RS07920;product=type II secretion system F family protein;protein_id=WP_038272902.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1826967 1828682 . - . ID=gene-LPH58_RS07925;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LPH58_RS07925;old_locus_tag=LPH58_07925 NZ_CP087690.1 Protein Homology CDS 1826967 1828682 . - 0 ID=cds-WP_038272901.1;Parent=gene-LPH58_RS07925;Dbxref=Genbank:WP_038272901.1;Name=WP_038272901.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343590.1;locus_tag=LPH58_RS07925;product=type II secretion system ATPase GspE;protein_id=WP_038272901.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1829017 1835295 . - . ID=gene-LPH58_RS07930;Name=LPH58_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07930;old_locus_tag=LPH58_07930 NZ_CP087690.1 Protein Homology CDS 1829017 1835295 . - 0 ID=cds-WP_114867165.1;Parent=gene-LPH58_RS07930;Dbxref=Genbank:WP_114867165.1;Name=WP_114867165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.2;locus_tag=LPH58_RS07930;product=YadA-like family protein;protein_id=WP_114867165.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1836178 1837089 . - . ID=gene-LPH58_RS07935;Name=LPH58_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07935;old_locus_tag=LPH58_07935 NZ_CP087690.1 Protein Homology CDS 1836178 1837089 . - 0 ID=cds-WP_038273112.1;Parent=gene-LPH58_RS07935;Dbxref=Genbank:WP_038273112.1;Name=WP_038273112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088966.1;locus_tag=LPH58_RS07935;product=AEC family transporter;protein_id=WP_038273112.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1837107 1838006 . - . ID=gene-LPH58_RS07940;Name=LPH58_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07940;old_locus_tag=LPH58_07940 NZ_CP087690.1 Protein Homology CDS 1837107 1838006 . - 0 ID=cds-WP_230428227.1;Parent=gene-LPH58_RS07940;Dbxref=Genbank:WP_230428227.1;Name=WP_230428227.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014698.2;locus_tag=LPH58_RS07940;product=TauD/TfdA family dioxygenase;protein_id=WP_230428227.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1838575 1839402 . + . ID=gene-LPH58_RS07945;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LPH58_RS07945;old_locus_tag=LPH58_07945 NZ_CP087690.1 Protein Homology CDS 1838575 1839402 . + 0 ID=cds-WP_038273117.1;Parent=gene-LPH58_RS07945;Dbxref=Genbank:WP_038273117.1;Name=WP_038273117.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894013.1;locus_tag=LPH58_RS07945;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_038273117.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1839503 1839841 . + . ID=gene-LPH58_RS07950;Name=LPH58_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07950;old_locus_tag=LPH58_07950 NZ_CP087690.1 Protein Homology CDS 1839503 1839841 . + 0 ID=cds-WP_038271972.1;Parent=gene-LPH58_RS07950;Dbxref=Genbank:WP_038271972.1;Name=WP_038271972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465222.1;locus_tag=LPH58_RS07950;product=DUF5713 family protein;protein_id=WP_038271972.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1839876 1840817 . + . ID=gene-LPH58_RS07955;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LPH58_RS07955;old_locus_tag=LPH58_07955 NZ_CP087690.1 Protein Homology CDS 1839876 1840817 . + 0 ID=cds-WP_038271970.1;Parent=gene-LPH58_RS07955;Dbxref=Genbank:WP_038271970.1;Name=WP_038271970.1;Ontology_term=GO:0030163,GO:0004177;gbkey=CDS;gene=pip;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852150.1;locus_tag=LPH58_RS07955;product=prolyl aminopeptidase;protein_id=WP_038271970.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1840898 1841236 . - . ID=gene-LPH58_RS07960;Name=LPH58_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07960;old_locus_tag=LPH58_07960 NZ_CP087690.1 Protein Homology CDS 1840898 1841236 . - 0 ID=cds-WP_038271968.1;Parent=gene-LPH58_RS07960;Dbxref=Genbank:WP_038271968.1;Name=WP_038271968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083693.1;locus_tag=LPH58_RS07960;product=PilZ domain-containing protein;protein_id=WP_038271968.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1841233 1843704 . - . ID=gene-LPH58_RS07965;Name=LPH58_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07965;old_locus_tag=LPH58_07965 NZ_CP087690.1 Protein Homology CDS 1841233 1843704 . - 0 ID=cds-WP_038271966.1;Parent=gene-LPH58_RS07965;Dbxref=Genbank:WP_038271966.1;Name=WP_038271966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088987.1;locus_tag=LPH58_RS07965;product=DUF1631 domain-containing protein;protein_id=WP_038271966.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1843779 1844933 . - . ID=gene-LPH58_RS07970;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LPH58_RS07970;old_locus_tag=LPH58_07970 NZ_CP087690.1 Protein Homology CDS 1843779 1844933 . - 0 ID=cds-WP_038271990.1;Parent=gene-LPH58_RS07970;Dbxref=Genbank:WP_038271990.1;Name=WP_038271990.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156861.1;locus_tag=LPH58_RS07970;product=radical SAM family heme chaperone HemW;protein_id=WP_038271990.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1845148 1845747 . - . ID=gene-LPH58_RS07975;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LPH58_RS07975;old_locus_tag=LPH58_07975 NZ_CP087690.1 Protein Homology CDS 1845148 1845747 . - 0 ID=cds-WP_038271988.1;Parent=gene-LPH58_RS07975;Dbxref=Genbank:WP_038271988.1;Name=WP_038271988.1;Ontology_term=GO:0006281,GO:0016462;gbkey=CDS;gene=rdgB;go_function=pyrophosphatase activity|0016462||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097758.1;locus_tag=LPH58_RS07975;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_038271988.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1845846 1846571 . - . ID=gene-LPH58_RS07980;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LPH58_RS07980;old_locus_tag=LPH58_07980 NZ_CP087690.1 Protein Homology CDS 1845846 1846571 . - 0 ID=cds-WP_038271963.1;Parent=gene-LPH58_RS07980;Dbxref=Genbank:WP_038271963.1;Name=WP_038271963.1;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083697.1;locus_tag=LPH58_RS07980;product=ribonuclease PH;protein_id=WP_038271963.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1846681 1847541 . + . ID=gene-LPH58_RS07985;Name=LPH58_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS07985;old_locus_tag=LPH58_07985 NZ_CP087690.1 Protein Homology CDS 1846681 1847541 . + 0 ID=cds-WP_038271959.1;Parent=gene-LPH58_RS07985;Dbxref=Genbank:WP_038271959.1;Name=WP_038271959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996763.1;locus_tag=LPH58_RS07985;product=YicC family protein;protein_id=WP_038271959.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1847641 1848255 . + . ID=gene-LPH58_RS07990;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LPH58_RS07990;old_locus_tag=LPH58_07990 NZ_CP087690.1 Protein Homology CDS 1847641 1848255 . + 0 ID=cds-WP_038271956.1;Parent=gene-LPH58_RS07990;Dbxref=Genbank:WP_038271956.1;Name=WP_038271956.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013534224.1;locus_tag=LPH58_RS07990;product=guanylate kinase;protein_id=WP_038271956.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1848478 1848777 . + . ID=gene-LPH58_RS07995;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LPH58_RS07995;old_locus_tag=LPH58_07995 NZ_CP087690.1 Protein Homology CDS 1848478 1848777 . + 0 ID=cds-WP_038271953.1;Parent=gene-LPH58_RS07995;Dbxref=Genbank:WP_038271953.1;Name=WP_038271953.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812428.1;locus_tag=LPH58_RS07995;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_038271953.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1850097 1851968 . - . ID=gene-LPH58_RS08000;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LPH58_RS08000;old_locus_tag=LPH58_08000 NZ_CP087690.1 Protein Homology CDS 1850097 1851968 . - 0 ID=cds-WP_230428289.1;Parent=gene-LPH58_RS08000;Dbxref=Genbank:WP_230428289.1;Name=WP_230428289.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894002.1;locus_tag=LPH58_RS08000;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_230428289.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1852076 1852984 . - . ID=gene-LPH58_RS08005;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LPH58_RS08005;old_locus_tag=LPH58_08005 NZ_CP087690.1 Protein Homology CDS 1852076 1852984 . - 0 ID=cds-WP_038271949.1;Parent=gene-LPH58_RS08005;Dbxref=Genbank:WP_038271949.1;Name=WP_038271949.1;Ontology_term=GO:0019419,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate reduction|0019419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010370926.1;locus_tag=LPH58_RS08005;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_038271949.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1853191 1855029 . + . ID=gene-LPH58_RS08010;Name=LPH58_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08010;old_locus_tag=LPH58_08010 NZ_CP087690.1 Protein Homology CDS 1853191 1855029 . + 0 ID=cds-WP_038271947.1;Parent=gene-LPH58_RS08010;Dbxref=Genbank:WP_038271947.1;Name=WP_038271947.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014504375.1;locus_tag=LPH58_RS08010;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WP_038271947.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1855153 1856859 . + . ID=gene-LPH58_RS08015;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=LPH58_RS08015;old_locus_tag=LPH58_08015 NZ_CP087690.1 Protein Homology CDS 1855153 1856859 . + 0 ID=cds-WP_038271945.1;Parent=gene-LPH58_RS08015;Dbxref=Genbank:WP_038271945.1;Name=WP_038271945.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089014.1;locus_tag=LPH58_RS08015;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_038271945.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1856856 1857587 . + . ID=gene-LPH58_RS08020;Name=LPH58_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08020;old_locus_tag=LPH58_08020 NZ_CP087690.1 Protein Homology CDS 1856856 1857587 . + 0 ID=cds-WP_038271943.1;Parent=gene-LPH58_RS08020;Dbxref=Genbank:WP_038271943.1;Name=WP_038271943.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038282.1;locus_tag=LPH58_RS08020;product=phosphoadenylyl-sulfate reductase;protein_id=WP_038271943.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1857826 1858029 . - . ID=gene-LPH58_RS08025;Name=LPH58_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08025;old_locus_tag=LPH58_08025 NZ_CP087690.1 GeneMarkS-2+ CDS 1857826 1858029 . - 0 ID=cds-WP_162814103.1;Parent=gene-LPH58_RS08025;Dbxref=Genbank:WP_162814103.1;Name=WP_162814103.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08025;product=hypothetical protein;protein_id=WP_162814103.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1858799 1860850 . - . ID=gene-LPH58_RS08030;Name=LPH58_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08030;old_locus_tag=LPH58_08030 NZ_CP087690.1 Protein Homology CDS 1858799 1860850 . - 0 ID=cds-WP_038271941.1;Parent=gene-LPH58_RS08030;Dbxref=Genbank:WP_038271941.1;Name=WP_038271941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083706.1;locus_tag=LPH58_RS08030;product=TonB-dependent receptor;protein_id=WP_038271941.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1860890 1861027 . + . ID=gene-LPH58_RS08035;Name=LPH58_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08035;old_locus_tag=LPH58_08035 NZ_CP087690.1 GeneMarkS-2+ CDS 1860890 1861027 . + 0 ID=cds-WP_160165203.1;Parent=gene-LPH58_RS08035;Dbxref=Genbank:WP_160165203.1;Name=WP_160165203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08035;product=hypothetical protein;protein_id=WP_160165203.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1861772 1862218 . + . ID=gene-LPH58_RS08040;Name=LPH58_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08040;old_locus_tag=LPH58_08040 NZ_CP087690.1 Protein Homology CDS 1861772 1862218 . + 0 ID=cds-WP_038271986.1;Parent=gene-LPH58_RS08040;Dbxref=Genbank:WP_038271986.1;Name=WP_038271986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893996.1;locus_tag=LPH58_RS08040;product=DUF192 domain-containing protein;protein_id=WP_038271986.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1862307 1863152 . + . ID=gene-LPH58_RS08045;Name=LPH58_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08045;old_locus_tag=LPH58_08045 NZ_CP087690.1 Protein Homology CDS 1862307 1863152 . + 0 ID=cds-WP_051482355.1;Parent=gene-LPH58_RS08045;Dbxref=Genbank:WP_051482355.1;Name=WP_051482355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851900.1;locus_tag=LPH58_RS08045;product=SirB1 family protein;protein_id=WP_051482355.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1864602 1865018 . - . ID=gene-LPH58_RS08050;Name=LPH58_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08050;old_locus_tag=LPH58_08050 NZ_CP087690.1 Protein Homology CDS 1864602 1865018 . - 0 ID=cds-WP_038271936.1;Parent=gene-LPH58_RS08050;Dbxref=Genbank:WP_038271936.1;Name=WP_038271936.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083709.1;locus_tag=LPH58_RS08050;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_038271936.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1867533 1867679 . - . ID=gene-LPH58_RS08055;Name=LPH58_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08055;old_locus_tag=LPH58_08055 NZ_CP087690.1 GeneMarkS-2+ CDS 1867533 1867679 . - 0 ID=cds-WP_160165201.1;Parent=gene-LPH58_RS08055;Dbxref=Genbank:WP_160165201.1;Name=WP_160165201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08055;product=hypothetical protein;protein_id=WP_160165201.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1868454 1868676 . - . ID=gene-LPH58_RS08060;Name=LPH58_RS08060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08060;old_locus_tag=LPH58_08060;partial=true;pseudo=true;start_range=.,1868454 NZ_CP087690.1 Protein Homology CDS 1868454 1868676 . - 0 ID=cds-LPH58_RS08060;Parent=gene-LPH58_RS08060;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LPH58_RS08060;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,1868454;transl_table=11 NZ_CP087690.1 RefSeq gene 1869525 1870004 . + . ID=gene-LPH58_RS08065;Name=LPH58_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08065;old_locus_tag=LPH58_08065 NZ_CP087690.1 Protein Homology CDS 1869525 1870004 . + 0 ID=cds-WP_038271933.1;Parent=gene-LPH58_RS08065;Dbxref=Genbank:WP_038271933.1;Name=WP_038271933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852160.1;locus_tag=LPH58_RS08065;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_038271933.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1870293 1870907 . - . ID=gene-LPH58_RS08070;Name=LPH58_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08070;old_locus_tag=LPH58_08070 NZ_CP087690.1 Protein Homology CDS 1870293 1870907 . - 0 ID=cds-WP_051482357.1;Parent=gene-LPH58_RS08070;Dbxref=Genbank:WP_051482357.1;Name=WP_051482357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852161.1;locus_tag=LPH58_RS08070;product=thioredoxin family protein;protein_id=WP_051482357.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1871564 1873453 . - . ID=gene-LPH58_RS08075;Name=LPH58_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08075;old_locus_tag=LPH58_08075 NZ_CP087690.1 Protein Homology CDS 1871564 1873453 . - 0 ID=cds-WP_038271983.1;Parent=gene-LPH58_RS08075;Dbxref=Genbank:WP_038271983.1;Name=WP_038271983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852162.1;locus_tag=LPH58_RS08075;product=M1 family metallopeptidase;protein_id=WP_038271983.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1873801 1874562 . - . ID=gene-LPH58_RS08080;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LPH58_RS08080;old_locus_tag=LPH58_08080 NZ_CP087690.1 Protein Homology CDS 1873801 1874562 . - 0 ID=cds-WP_038271927.1;Parent=gene-LPH58_RS08080;Dbxref=Genbank:WP_038271927.1;Name=WP_038271927.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852163.1;locus_tag=LPH58_RS08080;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_038271927.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1874978 1876333 . + . ID=gene-LPH58_RS08085;Name=LPH58_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08085;old_locus_tag=LPH58_08085 NZ_CP087690.1 Protein Homology CDS 1874978 1876333 . + 0 ID=cds-WP_038271981.1;Parent=gene-LPH58_RS08085;Dbxref=Genbank:WP_038271981.1;Name=WP_038271981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893987.1;locus_tag=LPH58_RS08085;product=DUF2252 family protein;protein_id=WP_038271981.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1876528 1877901 . - . ID=gene-LPH58_RS08090;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LPH58_RS08090;old_locus_tag=LPH58_08090 NZ_CP087690.1 Protein Homology CDS 1876528 1877901 . - 0 ID=cds-WP_038271925.1;Parent=gene-LPH58_RS08090;Dbxref=Genbank:WP_038271925.1;Name=WP_038271925.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850946.1;locus_tag=LPH58_RS08090;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_038271925.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1877968 1878519 . - . ID=gene-LPH58_RS08095;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LPH58_RS08095;old_locus_tag=LPH58_08095 NZ_CP087690.1 Protein Homology CDS 1877968 1878519 . - 0 ID=cds-WP_038271923.1;Parent=gene-LPH58_RS08095;Dbxref=Genbank:WP_038271923.1;Name=WP_038271923.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260360.1;locus_tag=LPH58_RS08095;product=ATP-dependent protease subunit HslV;protein_id=WP_038271923.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1879911 1880420 . + . ID=gene-LPH58_RS08100;Name=LPH58_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08100;old_locus_tag=LPH58_08100 NZ_CP087690.1 GeneMarkS-2+ CDS 1879911 1880420 . + 0 ID=cds-WP_038271920.1;Parent=gene-LPH58_RS08100;Dbxref=Genbank:WP_038271920.1;Name=WP_038271920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08100;product=hypothetical protein;protein_id=WP_038271920.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1880887 1881771 . - . ID=gene-LPH58_RS08105;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LPH58_RS08105;old_locus_tag=LPH58_08105 NZ_CP087690.1 Protein Homology CDS 1880887 1881771 . - 0 ID=cds-WP_038271918.1;Parent=gene-LPH58_RS08105;Dbxref=Genbank:WP_038271918.1;Name=WP_038271918.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089050.1;locus_tag=LPH58_RS08105;product=tyrosine recombinase XerC;protein_id=WP_038271918.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1881798 1882469 . - . ID=gene-LPH58_RS08110;Name=LPH58_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08110;old_locus_tag=LPH58_08110 NZ_CP087690.1 Protein Homology CDS 1881798 1882469 . - 0 ID=cds-WP_038271916.1;Parent=gene-LPH58_RS08110;Dbxref=Genbank:WP_038271916.1;Name=WP_038271916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003482765.1;locus_tag=LPH58_RS08110;product=DUF484 family protein;protein_id=WP_038271916.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1882466 1883320 . - . ID=gene-LPH58_RS08115;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LPH58_RS08115;old_locus_tag=LPH58_08115 NZ_CP087690.1 Protein Homology CDS 1882466 1883320 . - 0 ID=cds-WP_038271979.1;Parent=gene-LPH58_RS08115;Dbxref=Genbank:WP_038271979.1;Name=WP_038271979.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850942.1;locus_tag=LPH58_RS08115;product=diaminopimelate epimerase;protein_id=WP_038271979.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1883330 1883539 . - . ID=gene-LPH58_RS08120;Name=LPH58_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08120;old_locus_tag=LPH58_08120 NZ_CP087690.1 Protein Homology CDS 1883330 1883539 . - 0 ID=cds-WP_038271914.1;Parent=gene-LPH58_RS08120;Dbxref=Genbank:WP_038271914.1;Name=WP_038271914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089059.1;locus_tag=LPH58_RS08120;product=lipoprotein;protein_id=WP_038271914.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1883630 1885789 . - . ID=gene-LPH58_RS08125;Name=LPH58_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08125;old_locus_tag=LPH58_08125 NZ_CP087690.1 Protein Homology CDS 1883630 1885789 . - 0 ID=cds-WP_038271911.1;Parent=gene-LPH58_RS08125;Dbxref=Genbank:WP_038271911.1;Name=WP_038271911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607685.1;locus_tag=LPH58_RS08125;product=oligopeptidase B;protein_id=WP_038271911.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1887210 1887677 . - . ID=gene-LPH58_RS08130;Name=LPH58_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08130;old_locus_tag=LPH58_08130 NZ_CP087690.1 Protein Homology CDS 1887210 1887677 . - 0 ID=cds-WP_038271909.1;Parent=gene-LPH58_RS08130;Dbxref=Genbank:WP_038271909.1;Name=WP_038271909.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237451.1;locus_tag=LPH58_RS08130;product=SET domain-containing protein-lysine N-methyltransferase;protein_id=WP_038271909.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1887842 1888303 . + . ID=gene-LPH58_RS08135;Name=LPH58_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08135;old_locus_tag=LPH58_08135 NZ_CP087690.1 Protein Homology CDS 1887842 1888303 . + 0 ID=cds-WP_038271908.1;Parent=gene-LPH58_RS08135;Dbxref=Genbank:WP_038271908.1;Name=WP_038271908.1;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369303.1;locus_tag=LPH58_RS08135;product=SUF system Fe-S cluster assembly regulator;protein_id=WP_038271908.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1888323 1889780 . + . ID=gene-LPH58_RS08140;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=LPH58_RS08140;old_locus_tag=LPH58_08140 NZ_CP087690.1 Protein Homology CDS 1888323 1889780 . + 0 ID=cds-WP_038271907.1;Parent=gene-LPH58_RS08140;Dbxref=Genbank:WP_038271907.1;Name=WP_038271907.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902344.1;locus_tag=LPH58_RS08140;product=Fe-S cluster assembly protein SufB;protein_id=WP_038271907.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1889910 1890749 . + . ID=gene-LPH58_RS08145;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=LPH58_RS08145;old_locus_tag=LPH58_08145 NZ_CP087690.1 Protein Homology CDS 1889910 1890749 . + 0 ID=cds-WP_051482354.1;Parent=gene-LPH58_RS08145;Dbxref=Genbank:WP_051482354.1;Name=WP_051482354.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893976.1;locus_tag=LPH58_RS08145;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_051482354.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1890746 1892014 . + . ID=gene-LPH58_RS08150;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=LPH58_RS08150;old_locus_tag=LPH58_08150 NZ_CP087690.1 Protein Homology CDS 1890746 1892014 . + 0 ID=cds-WP_038271905.1;Parent=gene-LPH58_RS08150;Dbxref=Genbank:WP_038271905.1;Name=WP_038271905.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014090672.1;locus_tag=LPH58_RS08150;product=Fe-S cluster assembly protein SufD;protein_id=WP_038271905.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1892002 1893252 . + . ID=gene-LPH58_RS08155;Name=LPH58_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08155;old_locus_tag=LPH58_08155 NZ_CP087690.1 Protein Homology CDS 1892002 1893252 . + 0 ID=cds-WP_038271903.1;Parent=gene-LPH58_RS08155;Dbxref=Genbank:WP_038271903.1;Name=WP_038271903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337770.1;locus_tag=LPH58_RS08155;product=cysteine desulfurase;protein_id=WP_038271903.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1893568 1893897 . + . ID=gene-LPH58_RS08160;Name=LPH58_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08160;old_locus_tag=LPH58_08160 NZ_CP087690.1 Protein Homology CDS 1893568 1893897 . + 0 ID=cds-WP_081755464.1;Parent=gene-LPH58_RS08160;Dbxref=Genbank:WP_081755464.1;Name=WP_081755464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508448.1;locus_tag=LPH58_RS08160;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_081755464.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1894765 1895910 . + . ID=gene-LPH58_RS08165;Name=LPH58_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08165;old_locus_tag=LPH58_08165 NZ_CP087690.1 Protein Homology CDS 1894765 1895910 . + 0 ID=cds-WP_038271897.1;Parent=gene-LPH58_RS08165;Dbxref=Genbank:WP_038271897.1;Name=WP_038271897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850935.1;locus_tag=LPH58_RS08165;product=glycosyltransferase family 4 protein;protein_id=WP_038271897.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1895907 1896761 . + . ID=gene-LPH58_RS08170;Name=LPH58_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08170;old_locus_tag=LPH58_08170 NZ_CP087690.1 Protein Homology CDS 1895907 1896761 . + 0 ID=cds-WP_038271895.1;Parent=gene-LPH58_RS08170;Dbxref=Genbank:WP_038271895.1;Name=WP_038271895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083728.1;locus_tag=LPH58_RS08170;product=polysaccharide deacetylase family protein;protein_id=WP_038271895.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1896882 1898228 . - . ID=gene-LPH58_RS08175;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LPH58_RS08175;old_locus_tag=LPH58_08175 NZ_CP087690.1 Protein Homology CDS 1896882 1898228 . - 0 ID=cds-WP_038271893.1;Parent=gene-LPH58_RS08175;Dbxref=Genbank:WP_038271893.1;Name=WP_038271893.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular transferase activity%2C phosphotransferases|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300396.1;locus_tag=LPH58_RS08175;product=phosphoglucosamine mutase;protein_id=WP_038271893.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1898225 1899121 . - . ID=gene-LPH58_RS08180;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LPH58_RS08180;old_locus_tag=LPH58_08180 NZ_CP087690.1 Protein Homology CDS 1898225 1899121 . - 0 ID=cds-WP_038271891.1;Parent=gene-LPH58_RS08180;Dbxref=Genbank:WP_038271891.1;Name=WP_038271891.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893968.1;locus_tag=LPH58_RS08180;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_038271891.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1899347 1899640 . - . ID=gene-LPH58_RS08185;Name=LPH58_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08185;old_locus_tag=LPH58_08185 NZ_CP087690.1 GeneMarkS-2+ CDS 1899347 1899640 . - 0 ID=cds-WP_152536645.1;Parent=gene-LPH58_RS08185;Dbxref=Genbank:WP_152536645.1;Name=WP_152536645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08185;product=hypothetical protein;protein_id=WP_152536645.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1899649 1899885 . - . ID=gene-LPH58_RS08190;Name=LPH58_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08190;old_locus_tag=LPH58_08190 NZ_CP087690.1 GeneMarkS-2+ CDS 1899649 1899885 . - 0 ID=cds-WP_038271889.1;Parent=gene-LPH58_RS08190;Dbxref=Genbank:WP_038271889.1;Name=WP_038271889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08190;product=hypothetical protein;protein_id=WP_038271889.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1900538 1900804 . + . ID=gene-LPH58_RS08195;Name=LPH58_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08195;old_locus_tag=LPH58_08195 NZ_CP087690.1 GeneMarkS-2+ CDS 1900538 1900804 . + 0 ID=cds-WP_230433937.1;Parent=gene-LPH58_RS08195;Dbxref=Genbank:WP_230433937.1;Name=WP_230433937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08195;product=hypothetical protein;protein_id=WP_230433937.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1900823 1901983 . - . ID=gene-LPH58_RS08200;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LPH58_RS08200;old_locus_tag=LPH58_08200 NZ_CP087690.1 Protein Homology CDS 1900823 1901983 . - 0 ID=cds-WP_171898054.1;Parent=gene-LPH58_RS08200;Dbxref=Genbank:WP_171898054.1;Name=WP_171898054.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974066.1;locus_tag=LPH58_RS08200;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_171898054.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1901980 1903008 . - . ID=gene-LPH58_RS08205;Name=LPH58_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08205;old_locus_tag=LPH58_08205 NZ_CP087690.1 Protein Homology CDS 1901980 1903008 . - 0 ID=cds-WP_038271975.1;Parent=gene-LPH58_RS08205;Dbxref=Genbank:WP_038271975.1;Name=WP_038271975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005419331.1;locus_tag=LPH58_RS08205;product=SIS domain-containing protein;protein_id=WP_038271975.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1903017 1904073 . - . ID=gene-LPH58_RS08210;Name=LPH58_RS08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08210;old_locus_tag=LPH58_08210;pseudo=true NZ_CP087690.1 Protein Homology CDS 1903017 1904073 . - 0 ID=cds-LPH58_RS08210;Parent=gene-LPH58_RS08210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850932.1;locus_tag=LPH58_RS08210;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1904077 1905366 . - . ID=gene-LPH58_RS08215;Name=gluP;gbkey=Gene;gene=gluP;gene_biotype=protein_coding;locus_tag=LPH58_RS08215;old_locus_tag=LPH58_08215 NZ_CP087690.1 Protein Homology CDS 1904077 1905366 . - 0 ID=cds-WP_038271879.1;Parent=gene-LPH58_RS08215;Dbxref=Genbank:WP_038271879.1;Name=WP_038271879.1;gbkey=CDS;gene=gluP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850931.1;locus_tag=LPH58_RS08215;product=glucose/galactose MFS transporter;protein_id=WP_038271879.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1905431 1905592 . - . ID=gene-LPH58_RS08220;Name=LPH58_RS08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08220;old_locus_tag=LPH58_08220;partial=true;pseudo=true;start_range=.,1905431 NZ_CP087690.1 Protein Homology CDS 1905431 1905592 . - 0 ID=cds-LPH58_RS08220;Parent=gene-LPH58_RS08220;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156688.1;locus_tag=LPH58_RS08220;partial=true;product=GntR family transcriptional regulator;pseudo=true;start_range=.,1905431;transl_table=11 NZ_CP087690.1 RefSeq gene 1905997 1907001 . + . ID=gene-LPH58_RS08225;Name=LPH58_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08225;old_locus_tag=LPH58_08225 NZ_CP087690.1 Protein Homology CDS 1905997 1907001 . + 0 ID=cds-WP_114867222.1;Parent=gene-LPH58_RS08225;Dbxref=Genbank:WP_114867222.1;Name=WP_114867222.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083735.1;locus_tag=LPH58_RS08225;product=glucokinase;protein_id=WP_114867222.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1907025 1907438 . - . ID=gene-LPH58_RS08230;Name=LPH58_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08230;old_locus_tag=LPH58_08230 NZ_CP087690.1 Protein Homology CDS 1907025 1907438 . - 0 ID=cds-WP_038272188.1;Parent=gene-LPH58_RS08230;Dbxref=Genbank:WP_038272188.1;Name=WP_038272188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850928.1;locus_tag=LPH58_RS08230;product=antibiotic resistance protein VanZ;protein_id=WP_038272188.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1907426 1908610 . - . ID=gene-LPH58_RS08235;Name=LPH58_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08235;old_locus_tag=LPH58_08235 NZ_CP087690.1 Protein Homology CDS 1907426 1908610 . - 0 ID=cds-WP_038272190.1;Parent=gene-LPH58_RS08235;Dbxref=Genbank:WP_038272190.1;Name=WP_038272190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010368204.1;locus_tag=LPH58_RS08235;product=class I SAM-dependent methyltransferase;protein_id=WP_038272190.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1908686 1909411 . + . ID=gene-LPH58_RS08240;Name=LPH58_RS08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08240;old_locus_tag=LPH58_08240;pseudo=true NZ_CP087690.1 Protein Homology CDS 1908686 1909411 . + 0 ID=cds-LPH58_RS08240;Parent=gene-LPH58_RS08240;Note=internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303260.1;locus_tag=LPH58_RS08240;product=pteridine reductase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1909418 1909789 . - . ID=gene-LPH58_RS08245;Name=LPH58_RS08245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08245;old_locus_tag=LPH58_08245;pseudo=true NZ_CP087690.1 Protein Homology CDS 1909418 1909789 . - 0 ID=cds-LPH58_RS08245;Parent=gene-LPH58_RS08245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089110.1;locus_tag=LPH58_RS08245;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1909922 1911418 . - . ID=gene-LPH58_RS08250;Name=LPH58_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08250;old_locus_tag=LPH58_08250 NZ_CP087690.1 Protein Homology CDS 1909922 1911418 . - 0 ID=cds-WP_038272192.1;Parent=gene-LPH58_RS08250;Dbxref=Genbank:WP_038272192.1;Name=WP_038272192.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850924.1;locus_tag=LPH58_RS08250;product=response regulator;protein_id=WP_038272192.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1912001 1912165 . - . ID=gene-LPH58_RS08255;Name=LPH58_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08255;old_locus_tag=LPH58_08255 NZ_CP087690.1 GeneMarkS-2+ CDS 1912001 1912165 . - 0 ID=cds-WP_160165209.1;Parent=gene-LPH58_RS08255;Dbxref=Genbank:WP_160165209.1;Name=WP_160165209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08255;product=hypothetical protein;protein_id=WP_160165209.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1913218 1913361 . - . ID=gene-LPH58_RS08260;Name=LPH58_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08260;old_locus_tag=LPH58_08260 NZ_CP087690.1 GeneMarkS-2+ CDS 1913218 1913361 . - 0 ID=cds-WP_160165210.1;Parent=gene-LPH58_RS08260;Dbxref=Genbank:WP_160165210.1;Name=WP_160165210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08260;product=hypothetical protein;protein_id=WP_160165210.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1913719 1914132 . - . ID=gene-LPH58_RS08265;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LPH58_RS08265;old_locus_tag=LPH58_08265 NZ_CP087690.1 Protein Homology CDS 1913719 1914132 . - 0 ID=cds-WP_038272195.1;Parent=gene-LPH58_RS08265;Dbxref=Genbank:WP_038272195.1;Name=WP_038272195.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006448736.1;locus_tag=LPH58_RS08265;product=fluoride efflux transporter CrcB;protein_id=WP_038272195.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1914294 1915583 . - . ID=gene-LPH58_RS08270;Name=LPH58_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08270;old_locus_tag=LPH58_08270 NZ_CP087690.1 Protein Homology CDS 1914294 1915583 . - 0 ID=cds-WP_201745741.1;Parent=gene-LPH58_RS08270;Dbxref=Genbank:WP_201745741.1;Name=WP_201745741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014507724.1;locus_tag=LPH58_RS08270;product=replication-associated recombination protein A;protein_id=WP_201745741.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1915826 1916452 . - . ID=gene-LPH58_RS08275;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LPH58_RS08275;old_locus_tag=LPH58_08275 NZ_CP087690.1 Protein Homology CDS 1915826 1916452 . - 0 ID=cds-WP_038272259.1;Parent=gene-LPH58_RS08275;Dbxref=Genbank:WP_038272259.1;Name=WP_038272259.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089126.1;locus_tag=LPH58_RS08275;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_038272259.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1916515 1916757 . - . ID=gene-LPH58_RS08280;Name=LPH58_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08280;old_locus_tag=LPH58_08280 NZ_CP087690.1 GeneMarkS-2+ CDS 1916515 1916757 . - 0 ID=cds-WP_038272200.1;Parent=gene-LPH58_RS08280;Dbxref=Genbank:WP_038272200.1;Name=WP_038272200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08280;product=hypothetical protein;protein_id=WP_038272200.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1917774 1919648 . - . ID=gene-LPH58_RS08285;Name=LPH58_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08285;old_locus_tag=LPH58_08285 NZ_CP087690.1 Protein Homology CDS 1917774 1919648 . - 0 ID=cds-WP_230428290.1;Parent=gene-LPH58_RS08285;Dbxref=Genbank:WP_230428290.1;Name=WP_230428290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850921.1;locus_tag=LPH58_RS08285;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_230428290.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1919842 1922196 . - . ID=gene-LPH58_RS08290;Name=LPH58_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08290;old_locus_tag=LPH58_08290 NZ_CP087690.1 Protein Homology CDS 1919842 1922196 . - 0 ID=cds-WP_038272204.1;Parent=gene-LPH58_RS08290;Dbxref=Genbank:WP_038272204.1;Name=WP_038272204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083745.1;locus_tag=LPH58_RS08290;product=DNA translocase FtsK;protein_id=WP_038272204.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1922469 1923434 . + . ID=gene-LPH58_RS08295;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LPH58_RS08295;old_locus_tag=LPH58_08295 NZ_CP087690.1 Protein Homology CDS 1922469 1923434 . + 0 ID=cds-WP_038272206.1;Parent=gene-LPH58_RS08295;Dbxref=Genbank:WP_038272206.1;Name=WP_038272206.1;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006366671.1;locus_tag=LPH58_RS08295;product=thioredoxin-disulfide reductase;protein_id=WP_038272206.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1923878 1925014 . + . ID=gene-LPH58_RS08300;Name=LPH58_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08300;old_locus_tag=LPH58_08300 NZ_CP087690.1 Protein Homology CDS 1923878 1925014 . + 0 ID=cds-WP_038272208.1;Parent=gene-LPH58_RS08300;Dbxref=Genbank:WP_038272208.1;Name=WP_038272208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850918.1;locus_tag=LPH58_RS08300;product=GNAT family N-acetyltransferase;protein_id=WP_038272208.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1925025 1925756 . + . ID=gene-LPH58_RS08305;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LPH58_RS08305;old_locus_tag=LPH58_08305 NZ_CP087690.1 Protein Homology CDS 1925025 1925756 . + 0 ID=cds-WP_038272210.1;Parent=gene-LPH58_RS08305;Dbxref=Genbank:WP_038272210.1;Name=WP_038272210.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyltransferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089137.1;locus_tag=LPH58_RS08305;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_038272210.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1925873 1926091 . + . ID=gene-LPH58_RS08310;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LPH58_RS08310;old_locus_tag=LPH58_08310 NZ_CP087690.1 Protein Homology CDS 1925873 1926091 . + 0 ID=cds-WP_038272213.1;Parent=gene-LPH58_RS08310;Dbxref=Genbank:WP_038272213.1;Name=WP_038272213.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553999.1;locus_tag=LPH58_RS08310;product=translation initiation factor IF-1;protein_id=WP_038272213.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1926422 1928698 . - . ID=gene-LPH58_RS08315;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LPH58_RS08315;old_locus_tag=LPH58_08315 NZ_CP087690.1 Protein Homology CDS 1926422 1928698 . - 0 ID=cds-WP_038272214.1;Parent=gene-LPH58_RS08315;Dbxref=Genbank:WP_038272214.1;Name=WP_038272214.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901749.1;locus_tag=LPH58_RS08315;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_038272214.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1928827 1929147 . - . ID=gene-LPH58_RS08320;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LPH58_RS08320;old_locus_tag=LPH58_08320 NZ_CP087690.1 Protein Homology CDS 1928827 1929147 . - 0 ID=cds-WP_038272215.1;Parent=gene-LPH58_RS08320;Dbxref=Genbank:WP_038272215.1;Name=WP_038272215.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914463.1;locus_tag=LPH58_RS08320;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_038272215.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1929349 1929807 . + . ID=gene-LPH58_RS08325;Name=LPH58_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08325;old_locus_tag=LPH58_08325 NZ_CP087690.1 Protein Homology CDS 1929349 1929807 . + 0 ID=cds-WP_038272217.1;Parent=gene-LPH58_RS08325;Dbxref=Genbank:WP_038272217.1;Name=WP_038272217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083752.1;locus_tag=LPH58_RS08325;product=NUDIX hydrolase;protein_id=WP_038272217.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1929804 1930928 . + . ID=gene-LPH58_RS08330;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LPH58_RS08330;old_locus_tag=LPH58_08330 NZ_CP087690.1 Protein Homology CDS 1929804 1930928 . + 0 ID=cds-WP_038272219.1;Parent=gene-LPH58_RS08330;Dbxref=Genbank:WP_038272219.1;Name=WP_038272219.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008575784.1;locus_tag=LPH58_RS08330;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_038272219.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1930941 1931555 . + . ID=gene-LPH58_RS08335;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=LPH58_RS08335;old_locus_tag=LPH58_08335 NZ_CP087690.1 Protein Homology CDS 1930941 1931555 . + 0 ID=cds-WP_038272221.1;Parent=gene-LPH58_RS08335;Dbxref=Genbank:WP_038272221.1;Name=WP_038272221.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893940.1;locus_tag=LPH58_RS08335;product=high frequency lysogenization protein HflD;protein_id=WP_038272221.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1932104 1932394 . + . ID=gene-LPH58_RS08340;Name=LPH58_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08340;old_locus_tag=LPH58_08340 NZ_CP087690.1 GeneMarkS-2+ CDS 1932104 1932394 . + 0 ID=cds-WP_038272223.1;Parent=gene-LPH58_RS08340;Dbxref=Genbank:WP_038272223.1;Name=WP_038272223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08340;product=hypothetical protein;protein_id=WP_038272223.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1933018 1933785 . - . ID=gene-LPH58_RS08345;Name=LPH58_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08345;old_locus_tag=LPH58_08345 NZ_CP087690.1 Protein Homology CDS 1933018 1933785 . - 0 ID=cds-WP_038272225.1;Parent=gene-LPH58_RS08345;Dbxref=Genbank:WP_038272225.1;Name=WP_038272225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011260285.1;locus_tag=LPH58_RS08345;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_038272225.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1933801 1934568 . - . ID=gene-LPH58_RS08350;Name=LPH58_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08350;old_locus_tag=LPH58_08350 NZ_CP087690.1 Protein Homology CDS 1933801 1934568 . - 0 ID=cds-WP_038272261.1;Parent=gene-LPH58_RS08350;Dbxref=Genbank:WP_038272261.1;Name=WP_038272261.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850913.1;locus_tag=LPH58_RS08350;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_038272261.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1934649 1935305 . - . ID=gene-LPH58_RS08355;Name=LPH58_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08355;old_locus_tag=LPH58_08355 NZ_CP087690.1 Protein Homology CDS 1934649 1935305 . - 0 ID=cds-WP_038272264.1;Parent=gene-LPH58_RS08355;Dbxref=Genbank:WP_038272264.1;Name=WP_038272264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183737.1;locus_tag=LPH58_RS08355;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_038272264.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1935770 1935904 . - . ID=gene-LPH58_RS12000;Name=LPH58_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12000 NZ_CP087690.1 GeneMarkS-2+ CDS 1935770 1935904 . - 0 ID=cds-WP_267903156.1;Parent=gene-LPH58_RS12000;Dbxref=Genbank:WP_267903156.1;Name=WP_267903156.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12000;product=hypothetical protein;protein_id=WP_267903156.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1936289 1936900 . + . ID=gene-LPH58_RS08360;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LPH58_RS08360;old_locus_tag=LPH58_08360 NZ_CP087690.1 Protein Homology CDS 1936289 1936900 . + 0 ID=cds-WP_038272231.1;Parent=gene-LPH58_RS08360;Dbxref=Genbank:WP_038272231.1;Name=WP_038272231.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299877.1;locus_tag=LPH58_RS08360;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_038272231.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1937101 1938465 . + . ID=gene-LPH58_RS08365;Name=LPH58_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08365;old_locus_tag=LPH58_08365 NZ_CP087690.1 Protein Homology CDS 1937101 1938465 . + 0 ID=cds-WP_038272234.1;Parent=gene-LPH58_RS08365;Dbxref=Genbank:WP_038272234.1;Name=WP_038272234.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477658.1;locus_tag=LPH58_RS08365;product=glutamate--cysteine ligase;protein_id=WP_038272234.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1938760 1938897 . - . ID=gene-LPH58_RS08370;Name=LPH58_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08370;old_locus_tag=LPH58_08370 NZ_CP087690.1 GeneMarkS-2+ CDS 1938760 1938897 . - 0 ID=cds-WP_160165211.1;Parent=gene-LPH58_RS08370;Dbxref=Genbank:WP_160165211.1;Name=WP_160165211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08370;product=hypothetical protein;protein_id=WP_160165211.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1938906 1940141 . - . ID=gene-LPH58_RS08375;Name=LPH58_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08375;old_locus_tag=LPH58_08375 NZ_CP087690.1 Protein Homology CDS 1938906 1940141 . - 0 ID=cds-WP_038272236.1;Parent=gene-LPH58_RS08375;Dbxref=Genbank:WP_038272236.1;Name=WP_038272236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008577885.1;locus_tag=LPH58_RS08375;product=acetylornithine transaminase;protein_id=WP_038272236.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1940209 1941105 . + . ID=gene-LPH58_RS08380;Name=LPH58_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08380;old_locus_tag=LPH58_08380 NZ_CP087690.1 Protein Homology CDS 1940209 1941105 . + 0 ID=cds-WP_038272238.1;Parent=gene-LPH58_RS08380;Dbxref=Genbank:WP_038272238.1;Name=WP_038272238.1;Ontology_term=GO:0006811,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083762.1;locus_tag=LPH58_RS08380;product=ion transporter;protein_id=WP_038272238.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1941366 1942340 . + . ID=gene-LPH58_RS08385;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LPH58_RS08385;old_locus_tag=LPH58_08385 NZ_CP087690.1 Protein Homology CDS 1941366 1942340 . + 0 ID=cds-WP_038272241.1;Parent=gene-LPH58_RS08385;Dbxref=Genbank:WP_038272241.1;Name=WP_038272241.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005932805.1;locus_tag=LPH58_RS08385;product=site-specific tyrosine recombinase XerD;protein_id=WP_038272241.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1942472 1943260 . + . ID=gene-LPH58_RS08390;Name=LPH58_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08390;old_locus_tag=LPH58_08390 NZ_CP087690.1 Protein Homology CDS 1942472 1943260 . + 0 ID=cds-WP_038272243.1;Parent=gene-LPH58_RS08390;Dbxref=Genbank:WP_038272243.1;Name=WP_038272243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850905.1;locus_tag=LPH58_RS08390;product=DsbC family protein;protein_id=WP_038272243.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1943457 1947431 . + . ID=gene-LPH58_RS08395;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=LPH58_RS08395;old_locus_tag=LPH58_08395 NZ_CP087690.1 Protein Homology CDS 1943457 1947431 . + 0 ID=cds-WP_038272267.1;Parent=gene-LPH58_RS08395;Dbxref=Genbank:WP_038272267.1;Name=WP_038272267.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367790.1;locus_tag=LPH58_RS08395;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_038272267.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1948334 1948642 . - . ID=gene-LPH58_RS08400;Name=LPH58_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08400;old_locus_tag=LPH58_08400 NZ_CP087690.1 Protein Homology CDS 1948334 1948642 . - 0 ID=cds-WP_038272244.1;Parent=gene-LPH58_RS08400;Dbxref=Genbank:WP_038272244.1;Name=WP_038272244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097729.1;locus_tag=LPH58_RS08400;product=hypothetical protein;protein_id=WP_038272244.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1948639 1949916 . - . ID=gene-LPH58_RS08405;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LPH58_RS08405;old_locus_tag=LPH58_08405 NZ_CP087690.1 Protein Homology CDS 1948639 1949916 . - 0 ID=cds-WP_038272246.1;Parent=gene-LPH58_RS08405;Dbxref=Genbank:WP_038272246.1;Name=WP_038272246.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437778.1;locus_tag=LPH58_RS08405;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_038272246.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 1949974 1950238 . - . ID=gene-LPH58_RS08410;Name=LPH58_RS08410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08410;old_locus_tag=LPH58_08410;pseudo=true NZ_CP087690.1 Protein Homology CDS 1949974 1950238 . - 0 ID=cds-LPH58_RS08410;Parent=gene-LPH58_RS08410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011407890.1;locus_tag=LPH58_RS08410;product=BolA/IbaG family iron-sulfur metabolism protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 1950263 1951264 . + . ID=gene-LPH58_RS08415;Name=LPH58_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08415;old_locus_tag=LPH58_08415 NZ_CP087690.1 Protein Homology CDS 1950263 1951264 . + 0 ID=cds-WP_038272251.1;Parent=gene-LPH58_RS08415;Dbxref=Genbank:WP_038272251.1;Name=WP_038272251.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993233.1;locus_tag=LPH58_RS08415;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_038272251.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1951284 1951832 . + . ID=gene-LPH58_RS08420;Name=LPH58_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08420;old_locus_tag=LPH58_08420 NZ_CP087690.1 Protein Homology CDS 1951284 1951832 . + 0 ID=cds-WP_038272254.1;Parent=gene-LPH58_RS08420;Dbxref=Genbank:WP_038272254.1;Name=WP_038272254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508473.1;locus_tag=LPH58_RS08420;product=HAD family hydrolase;protein_id=WP_038272254.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1951829 1952398 . + . ID=gene-LPH58_RS08425;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LPH58_RS08425;old_locus_tag=LPH58_08425 NZ_CP087690.1 Protein Homology CDS 1951829 1952398 . + 0 ID=cds-WP_114867169.1;Parent=gene-LPH58_RS08425;Dbxref=Genbank:WP_114867169.1;Name=WP_114867169.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850898.1;locus_tag=LPH58_RS08425;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_114867169.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1952469 1952909 . + . ID=gene-LPH58_RS08430;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LPH58_RS08430;old_locus_tag=LPH58_08430 NZ_CP087690.1 Protein Homology CDS 1952469 1952909 . + 0 ID=cds-WP_230428291.1;Parent=gene-LPH58_RS08430;Dbxref=Genbank:WP_230428291.1;Name=WP_230428291.1;Ontology_term=GO:0015920,GO:0001530,GO:0030288,GO:0043190;gbkey=CDS;gene=lptA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893912.1;locus_tag=LPH58_RS08430;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_230428291.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1952909 1953631 . + . ID=gene-LPH58_RS08435;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LPH58_RS08435;old_locus_tag=LPH58_08435 NZ_CP087690.1 Protein Homology CDS 1952909 1953631 . + 0 ID=cds-WP_038271459.1;Parent=gene-LPH58_RS08435;Dbxref=Genbank:WP_038271459.1;Name=WP_038271459.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0009898,GO:0043190;gbkey=CDS;gene=lptB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913374.1;locus_tag=LPH58_RS08435;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_038271459.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1953678 1955054 . + . ID=gene-LPH58_RS08440;Name=LPH58_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08440;old_locus_tag=LPH58_08440 NZ_CP087690.1 Protein Homology CDS 1953678 1955054 . + 0 ID=cds-WP_038271528.1;Parent=gene-LPH58_RS08440;Dbxref=Genbank:WP_038271528.1;Name=WP_038271528.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185406.1;locus_tag=LPH58_RS08440;product=RNA polymerase factor sigma-54;protein_id=WP_038271528.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1955160 1955477 . + . ID=gene-LPH58_RS08445;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=LPH58_RS08445;old_locus_tag=LPH58_08445 NZ_CP087690.1 Protein Homology CDS 1955160 1955477 . + 0 ID=cds-WP_038271460.1;Parent=gene-LPH58_RS08445;Dbxref=Genbank:WP_038271460.1;Name=WP_038271460.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083778.1;locus_tag=LPH58_RS08445;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_038271460.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1955780 1956730 . + . ID=gene-LPH58_RS08450;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LPH58_RS08450;old_locus_tag=LPH58_08450 NZ_CP087690.1 Protein Homology CDS 1955780 1956730 . + 0 ID=cds-WP_114867170.1;Parent=gene-LPH58_RS08450;Dbxref=Genbank:WP_114867170.1;Name=WP_114867170.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004425835.1;locus_tag=LPH58_RS08450;product=HPr(Ser) kinase/phosphatase;protein_id=WP_114867170.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1956727 1957599 . + . ID=gene-LPH58_RS08455;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LPH58_RS08455;old_locus_tag=LPH58_08455 NZ_CP087690.1 Protein Homology CDS 1956727 1957599 . + 0 ID=cds-WP_038271462.1;Parent=gene-LPH58_RS08455;Dbxref=Genbank:WP_038271462.1;Name=WP_038271462.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850895.1;locus_tag=LPH58_RS08455;product=RNase adapter RapZ;protein_id=WP_038271462.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1958585 1958977 . + . ID=gene-LPH58_RS08460;Name=LPH58_RS08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08460;old_locus_tag=LPH58_08460 NZ_CP087690.1 Protein Homology CDS 1958585 1958977 . + 0 ID=cds-WP_038271463.1;Parent=gene-LPH58_RS08460;Dbxref=Genbank:WP_038271463.1;Name=WP_038271463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154797.1;locus_tag=LPH58_RS08460;product=PTS fructose IIA component family protein;protein_id=WP_038271463.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1958970 1959239 . + . ID=gene-LPH58_RS08465;Name=LPH58_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08465;old_locus_tag=LPH58_08465 NZ_CP087690.1 Protein Homology CDS 1958970 1959239 . + 0 ID=cds-WP_038271464.1;Parent=gene-LPH58_RS08465;Dbxref=Genbank:WP_038271464.1;Name=WP_038271464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237443.1;locus_tag=LPH58_RS08465;product=HPr family phosphocarrier protein;protein_id=WP_038271464.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1959280 1961007 . + . ID=gene-LPH58_RS08470;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LPH58_RS08470;old_locus_tag=LPH58_08470 NZ_CP087690.1 Protein Homology CDS 1959280 1961007 . + 0 ID=cds-WP_038271465.1;Parent=gene-LPH58_RS08470;Dbxref=Genbank:WP_038271465.1;Name=WP_038271465.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011097727.1;locus_tag=LPH58_RS08470;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_038271465.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1961118 1962479 . + . ID=gene-LPH58_RS08475;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=LPH58_RS08475;old_locus_tag=LPH58_08475 NZ_CP087690.1 Protein Homology CDS 1961118 1962479 . + 0 ID=cds-WP_038271466.1;Parent=gene-LPH58_RS08475;Dbxref=Genbank:WP_038271466.1;Name=WP_038271466.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008266103.1;locus_tag=LPH58_RS08475;product=magnesium transporter;protein_id=WP_038271466.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1962984 1963511 . + . ID=gene-LPH58_RS08480;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LPH58_RS08480;old_locus_tag=LPH58_08480 NZ_CP087690.1 Protein Homology CDS 1962984 1963511 . + 0 ID=cds-WP_051482336.1;Parent=gene-LPH58_RS08480;Dbxref=Genbank:WP_051482336.1;Name=WP_051482336.1;Ontology_term=GO:0005975,GO:0051596,GO:0004462;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA;go_process=carbohydrate metabolic process|0005975||IEA,methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089226.1;locus_tag=LPH58_RS08480;product=lactoylglutathione lyase;protein_id=WP_051482336.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1964194 1965384 . - . ID=gene-LPH58_RS08485;Name=LPH58_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08485;old_locus_tag=LPH58_08485 NZ_CP087690.1 Protein Homology CDS 1964194 1965384 . - 0 ID=cds-WP_051482339.1;Parent=gene-LPH58_RS08485;Dbxref=Genbank:WP_051482339.1;Name=WP_051482339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089227.1;locus_tag=LPH58_RS08485;product=cation:proton antiporter;protein_id=WP_051482339.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1966609 1967520 . - . ID=gene-LPH58_RS08490;Name=LPH58_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08490;old_locus_tag=LPH58_08490 NZ_CP087690.1 Protein Homology CDS 1966609 1967520 . - 0 ID=cds-WP_038271469.1;Parent=gene-LPH58_RS08490;Dbxref=Genbank:WP_038271469.1;Name=WP_038271469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020850889.1;locus_tag=LPH58_RS08490;product=class I SAM-dependent methyltransferase;protein_id=WP_038271469.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1967836 1968066 . + . ID=gene-LPH58_RS08495;Name=LPH58_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08495;old_locus_tag=LPH58_08495 NZ_CP087690.1 Protein Homology CDS 1967836 1968066 . + 0 ID=cds-WP_230428292.1;Parent=gene-LPH58_RS08495;Dbxref=Genbank:WP_230428292.1;Name=WP_230428292.1;Ontology_term=GO:0009372,GO:0017148,GO:0044010;gbkey=CDS;go_process=quorum sensing|0009372||IEA,negative regulation of translation|0017148||IEA,single-species biofilm formation|0044010||IEA;inference=COORDINATES: protein motif:HMM:NF027059.2;locus_tag=LPH58_RS08495;product=type II toxin-antitoxin system MqsR family toxin;protein_id=WP_230428292.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1969709 1969879 . + . ID=gene-LPH58_RS08500;Name=LPH58_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08500;old_locus_tag=LPH58_08500 NZ_CP087690.1 GeneMarkS-2+ CDS 1969709 1969879 . + 0 ID=cds-WP_160165189.1;Parent=gene-LPH58_RS08500;Dbxref=Genbank:WP_160165189.1;Name=WP_160165189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08500;product=hypothetical protein;protein_id=WP_160165189.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1970179 1970415 . + . ID=gene-LPH58_RS08505;Name=LPH58_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08505;old_locus_tag=LPH58_08505 NZ_CP087690.1 GeneMarkS-2+ CDS 1970179 1970415 . + 0 ID=cds-WP_038271471.1;Parent=gene-LPH58_RS08505;Dbxref=Genbank:WP_038271471.1;Name=WP_038271471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08505;product=hypothetical protein;protein_id=WP_038271471.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1971206 1971871 . + . ID=gene-LPH58_RS08510;Name=LPH58_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08510;old_locus_tag=LPH58_08510 NZ_CP087690.1 GeneMarkS-2+ CDS 1971206 1971871 . + 0 ID=cds-WP_051482337.1;Parent=gene-LPH58_RS08510;Dbxref=Genbank:WP_051482337.1;Name=WP_051482337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08510;product=hypothetical protein;protein_id=WP_051482337.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1971938 1972519 . + . ID=gene-LPH58_RS08515;Name=LPH58_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08515;old_locus_tag=LPH58_08515 NZ_CP087690.1 Protein Homology CDS 1971938 1972519 . + 0 ID=cds-WP_038271473.1;Parent=gene-LPH58_RS08515;Dbxref=Genbank:WP_038271473.1;Name=WP_038271473.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019464587.1;locus_tag=LPH58_RS08515;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_038271473.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1972516 1973169 . + . ID=gene-LPH58_RS08520;Name=LPH58_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08520;old_locus_tag=LPH58_08520 NZ_CP087690.1 Protein Homology CDS 1972516 1973169 . + 0 ID=cds-WP_038271474.1;Parent=gene-LPH58_RS08520;Dbxref=Genbank:WP_038271474.1;Name=WP_038271474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169443.1;locus_tag=LPH58_RS08520;product=hypothetical protein;protein_id=WP_038271474.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1973229 1974509 . + . ID=gene-LPH58_RS08525;Name=LPH58_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08525;old_locus_tag=LPH58_08525 NZ_CP087690.1 Protein Homology CDS 1973229 1974509 . + 0 ID=cds-WP_230428293.1;Parent=gene-LPH58_RS08525;Dbxref=Genbank:WP_230428293.1;Name=WP_230428293.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012438591.1;locus_tag=LPH58_RS08525;product=S8 family serine peptidase;protein_id=WP_230428293.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1974557 1974739 . + . ID=gene-LPH58_RS08530;Name=LPH58_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08530;old_locus_tag=LPH58_08530 NZ_CP087690.1 GeneMarkS-2+ CDS 1974557 1974739 . + 0 ID=cds-WP_038271481.1;Parent=gene-LPH58_RS08530;Dbxref=Genbank:WP_038271481.1;Name=WP_038271481.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08530;product=hypothetical protein;protein_id=WP_038271481.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1975208 1975690 . - . ID=gene-LPH58_RS08535;Name=LPH58_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08535;old_locus_tag=LPH58_08535 NZ_CP087690.1 Protein Homology CDS 1975208 1975690 . - 0 ID=cds-WP_038271482.1;Parent=gene-LPH58_RS08535;Dbxref=Genbank:WP_038271482.1;Name=WP_038271482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157214.1;locus_tag=LPH58_RS08535;product=single-stranded DNA-binding protein;protein_id=WP_038271482.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1975937 1976935 . + . ID=gene-LPH58_RS08540;Name=LPH58_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08540;old_locus_tag=LPH58_08540 NZ_CP087690.1 Protein Homology CDS 1975937 1976935 . + 0 ID=cds-WP_038271484.1;Parent=gene-LPH58_RS08540;Dbxref=Genbank:WP_038271484.1;Name=WP_038271484.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966188.1;locus_tag=LPH58_RS08540;product=polyprenyl synthetase family protein;protein_id=WP_038271484.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1977829 1978773 . + . ID=gene-LPH58_RS08545;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LPH58_RS08545;old_locus_tag=LPH58_08545 NZ_CP087690.1 Protein Homology CDS 1977829 1978773 . + 0 ID=cds-WP_038271486.1;Parent=gene-LPH58_RS08545;Dbxref=Genbank:WP_038271486.1;Name=WP_038271486.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300511.1;locus_tag=LPH58_RS08545;product=ubiquinol oxidase subunit II;protein_id=WP_038271486.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1978773 1980770 . + . ID=gene-LPH58_RS08550;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LPH58_RS08550;old_locus_tag=LPH58_08550 NZ_CP087690.1 Protein Homology CDS 1978773 1980770 . + 0 ID=cds-WP_038271488.1;Parent=gene-LPH58_RS08550;Dbxref=Genbank:WP_038271488.1;Name=WP_038271488.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015472398.1;locus_tag=LPH58_RS08550;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_038271488.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1980767 1981402 . + . ID=gene-LPH58_RS08555;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LPH58_RS08555;old_locus_tag=LPH58_08555 NZ_CP087690.1 Protein Homology CDS 1980767 1981402 . + 0 ID=cds-WP_171898089.1;Parent=gene-LPH58_RS08555;Dbxref=Genbank:WP_171898089.1;Name=WP_171898089.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoC;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016851535.1;locus_tag=LPH58_RS08555;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_171898089.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1981402 1981743 . + . ID=gene-LPH58_RS08560;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LPH58_RS08560;old_locus_tag=LPH58_08560 NZ_CP087690.1 Protein Homology CDS 1981402 1981743 . + 0 ID=cds-WP_038271490.1;Parent=gene-LPH58_RS08560;Dbxref=Genbank:WP_038271490.1;Name=WP_038271490.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017156584.1;locus_tag=LPH58_RS08560;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_038271490.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1982760 1985681 . - . ID=gene-LPH58_RS08565;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LPH58_RS08565;old_locus_tag=LPH58_08565 NZ_CP087690.1 Protein Homology CDS 1982760 1985681 . - 0 ID=cds-WP_038271491.1;Parent=gene-LPH58_RS08565;Dbxref=Genbank:WP_038271491.1;Name=WP_038271491.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994594.1;locus_tag=LPH58_RS08565;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_038271491.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1986207 1987694 . + . ID=gene-LPH58_RS08570;Name=LPH58_RS08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08570;old_locus_tag=LPH58_08570 NZ_CP087690.1 Protein Homology CDS 1986207 1987694 . + 0 ID=cds-WP_230428229.1;Parent=gene-LPH58_RS08570;Dbxref=Genbank:WP_230428229.1;Name=WP_230428229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913680.1;locus_tag=LPH58_RS08570;product=PhoPQ-activated pathogenicity-related family protein;protein_id=WP_230428229.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1987691 1992115 . - . ID=gene-LPH58_RS08575;Name=LPH58_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08575;old_locus_tag=LPH58_08575 NZ_CP087690.1 Protein Homology CDS 1987691 1992115 . - 0 ID=cds-WP_038271493.1;Parent=gene-LPH58_RS08575;Dbxref=Genbank:WP_038271493.1;Name=WP_038271493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090678.1;locus_tag=LPH58_RS08575;product=DUF3418 domain-containing protein;protein_id=WP_038271493.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1992199 1992741 . + . ID=gene-LPH58_RS08580;Name=LPH58_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08580;old_locus_tag=LPH58_08580 NZ_CP087690.1 Protein Homology CDS 1992199 1992741 . + 0 ID=cds-WP_038271495.1;Parent=gene-LPH58_RS08580;Dbxref=Genbank:WP_038271495.1;Name=WP_038271495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010364158.1;locus_tag=LPH58_RS08580;product=DNA starvation/stationary phase protection protein;protein_id=WP_038271495.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1992946 1994742 . + . ID=gene-LPH58_RS08585;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LPH58_RS08585;old_locus_tag=LPH58_08585 NZ_CP087690.1 Protein Homology CDS 1992946 1994742 . + 0 ID=cds-WP_038271497.1;Parent=gene-LPH58_RS08585;Dbxref=Genbank:WP_038271497.1;Name=WP_038271497.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017155540.1;locus_tag=LPH58_RS08585;product=DNA helicase RecQ;protein_id=WP_038271497.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1994868 1995335 . + . ID=gene-LPH58_RS08590;Name=LPH58_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08590;old_locus_tag=LPH58_08590 NZ_CP087690.1 Protein Homology CDS 1994868 1995335 . + 0 ID=cds-WP_038271498.1;Parent=gene-LPH58_RS08590;Dbxref=Genbank:WP_038271498.1;Name=WP_038271498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852759.1;locus_tag=LPH58_RS08590;product=hypothetical protein;protein_id=WP_038271498.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1995499 1995858 . - . ID=gene-LPH58_RS08595;Name=LPH58_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08595;old_locus_tag=LPH58_08595 NZ_CP087690.1 GeneMarkS-2+ CDS 1995499 1995858 . - 0 ID=cds-WP_152536628.1;Parent=gene-LPH58_RS08595;Dbxref=Genbank:WP_152536628.1;Name=WP_152536628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08595;product=hypothetical protein;protein_id=WP_152536628.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1995857 1996021 . + . ID=gene-LPH58_RS08600;Name=LPH58_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08600;old_locus_tag=LPH58_08600 NZ_CP087690.1 GeneMarkS-2+ CDS 1995857 1996021 . + 0 ID=cds-WP_160199308.1;Parent=gene-LPH58_RS08600;Dbxref=Genbank:WP_160199308.1;Name=WP_160199308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08600;product=hypothetical protein;protein_id=WP_160199308.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1996051 1997016 . - . ID=gene-LPH58_RS08605;Name=LPH58_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08605;old_locus_tag=LPH58_08605 NZ_CP087690.1 Protein Homology CDS 1996051 1997016 . - 0 ID=cds-WP_038271502.1;Parent=gene-LPH58_RS08605;Dbxref=Genbank:WP_038271502.1;Name=WP_038271502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337749.1;locus_tag=LPH58_RS08605;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_038271502.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1997206 1998600 . + . ID=gene-LPH58_RS08610;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LPH58_RS08610;old_locus_tag=LPH58_08610 NZ_CP087690.1 Protein Homology CDS 1997206 1998600 . + 0 ID=cds-WP_038271504.1;Parent=gene-LPH58_RS08610;Dbxref=Genbank:WP_038271504.1;Name=WP_038271504.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002807912.1;locus_tag=LPH58_RS08610;product=DNA repair protein RadA;protein_id=WP_038271504.1;transl_table=11 NZ_CP087690.1 RefSeq gene 1998928 1999329 . - . ID=gene-LPH58_RS08615;Name=LPH58_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08615;old_locus_tag=LPH58_08615 NZ_CP087690.1 GeneMarkS-2+ CDS 1998928 1999329 . - 0 ID=cds-WP_038271505.1;Parent=gene-LPH58_RS08615;Dbxref=Genbank:WP_038271505.1;Name=WP_038271505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08615;product=hypothetical protein;protein_id=WP_038271505.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2000074 2000880 . - . ID=gene-LPH58_RS08620;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LPH58_RS08620;old_locus_tag=LPH58_08620 NZ_CP087690.1 Protein Homology CDS 2000074 2000880 . - 0 ID=cds-WP_038271506.1;Parent=gene-LPH58_RS08620;Dbxref=Genbank:WP_038271506.1;Name=WP_038271506.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090667.1;locus_tag=LPH58_RS08620;product=tryptophan synthase subunit alpha;protein_id=WP_038271506.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2001009 2002223 . - . ID=gene-LPH58_RS08625;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LPH58_RS08625;old_locus_tag=LPH58_08625 NZ_CP087690.1 Protein Homology CDS 2001009 2002223 . - 0 ID=cds-WP_038271531.1;Parent=gene-LPH58_RS08625;Dbxref=Genbank:WP_038271531.1;Name=WP_038271531.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893879.1;locus_tag=LPH58_RS08625;product=tryptophan synthase subunit beta;protein_id=WP_038271531.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2002431 2002640 . + . ID=gene-LPH58_RS08630;Name=LPH58_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08630;old_locus_tag=LPH58_08630 NZ_CP087690.1 GeneMarkS-2+ CDS 2002431 2002640 . + 0 ID=cds-WP_038271507.1;Parent=gene-LPH58_RS08630;Dbxref=Genbank:WP_038271507.1;Name=WP_038271507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08630;product=hypothetical protein;protein_id=WP_038271507.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2002664 2003326 . - . ID=gene-LPH58_RS08635;Name=LPH58_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08635;old_locus_tag=LPH58_08635 NZ_CP087690.1 Protein Homology CDS 2002664 2003326 . - 0 ID=cds-WP_038271508.1;Parent=gene-LPH58_RS08635;Dbxref=Genbank:WP_038271508.1;Name=WP_038271508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006381350.1;locus_tag=LPH58_RS08635;product=phosphoribosylanthranilate isomerase;protein_id=WP_038271508.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2003323 2004093 . - . ID=gene-LPH58_RS08640;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LPH58_RS08640;old_locus_tag=LPH58_08640 NZ_CP087690.1 Protein Homology CDS 2003323 2004093 . - 0 ID=cds-WP_038271509.1;Parent=gene-LPH58_RS08640;Dbxref=Genbank:WP_038271509.1;Name=WP_038271509.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005417971.1;locus_tag=LPH58_RS08640;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_038271509.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2004138 2005910 . - . ID=gene-LPH58_RS08645;Name=LPH58_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08645;old_locus_tag=LPH58_08645 NZ_CP087690.1 Protein Homology CDS 2004138 2005910 . - 0 ID=cds-WP_038271510.1;Parent=gene-LPH58_RS08645;Dbxref=Genbank:WP_038271510.1;Name=WP_038271510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083830.1;locus_tag=LPH58_RS08645;product=FimV family protein;protein_id=WP_038271510.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2006068 2007102 . - . ID=gene-LPH58_RS08650;Name=LPH58_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08650;old_locus_tag=LPH58_08650 NZ_CP087690.1 Protein Homology CDS 2006068 2007102 . - 0 ID=cds-WP_038271511.1;Parent=gene-LPH58_RS08650;Dbxref=Genbank:WP_038271511.1;Name=WP_038271511.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851986.1;locus_tag=LPH58_RS08650;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_038271511.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2007470 2007769 . - . ID=gene-LPH58_RS08655;Name=LPH58_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08655;old_locus_tag=LPH58_08655 NZ_CP087690.1 GeneMarkS-2+ CDS 2007470 2007769 . - 0 ID=cds-WP_038271512.1;Parent=gene-LPH58_RS08655;Dbxref=Genbank:WP_038271512.1;Name=WP_038271512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08655;product=hypothetical protein;protein_id=WP_038271512.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2007762 2008880 . - . ID=gene-LPH58_RS08660;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LPH58_RS08660;old_locus_tag=LPH58_08660 NZ_CP087690.1 Protein Homology CDS 2007762 2008880 . - 0 ID=cds-WP_038271513.1;Parent=gene-LPH58_RS08660;Dbxref=Genbank:WP_038271513.1;Name=WP_038271513.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851985.1;locus_tag=LPH58_RS08660;product=chorismate synthase;protein_id=WP_038271513.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2008893 2009819 . - . ID=gene-LPH58_RS08665;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LPH58_RS08665;old_locus_tag=LPH58_08665 NZ_CP087690.1 Protein Homology CDS 2008893 2009819 . - 0 ID=cds-WP_038271514.1;Parent=gene-LPH58_RS08665;Dbxref=Genbank:WP_038271514.1;Name=WP_038271514.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927455.1;locus_tag=LPH58_RS08665;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_038271514.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2009994 2010266 . + . ID=gene-LPH58_RS08670;Name=LPH58_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08670;old_locus_tag=LPH58_08670 NZ_CP087690.1 Protein Homology CDS 2009994 2010266 . + 0 ID=cds-WP_230428294.1;Parent=gene-LPH58_RS08670;Dbxref=Genbank:WP_230428294.1;Name=WP_230428294.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014667.2;locus_tag=LPH58_RS08670;product=SCO family protein;protein_id=WP_230428294.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2010395 2012983 . - . ID=gene-LPH58_RS08675;Name=LPH58_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08675;old_locus_tag=LPH58_08675 NZ_CP087690.1 Protein Homology CDS 2010395 2012983 . - 0 ID=cds-WP_230428230.1;Parent=gene-LPH58_RS08675;Dbxref=Genbank:WP_230428230.1;Name=WP_230428230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338007.1;locus_tag=LPH58_RS08675;product=calcium-binding protein;protein_id=WP_230428230.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2013317 2013520 . - . ID=gene-LPH58_RS08680;Name=LPH58_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08680;old_locus_tag=LPH58_08680 NZ_CP087690.1 GeneMarkS-2+ CDS 2013317 2013520 . - 0 ID=cds-WP_081755452.1;Parent=gene-LPH58_RS08680;Dbxref=Genbank:WP_081755452.1;Name=WP_081755452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08680;product=hypothetical protein;protein_id=WP_081755452.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2013520 2013933 . - . ID=gene-LPH58_RS08685;Name=LPH58_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08685;old_locus_tag=LPH58_08685 NZ_CP087690.1 Protein Homology CDS 2013520 2013933 . - 0 ID=cds-WP_230428231.1;Parent=gene-LPH58_RS08685;Dbxref=Genbank:WP_230428231.1;Name=WP_230428231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098140.1;locus_tag=LPH58_RS08685;product=hypothetical protein;protein_id=WP_230428231.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2014090 2014620 . - . ID=gene-LPH58_RS08690;Name=LPH58_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08690;old_locus_tag=LPH58_08690 NZ_CP087690.1 Protein Homology CDS 2014090 2014620 . - 0 ID=cds-WP_201745726.1;Parent=gene-LPH58_RS08690;Dbxref=Genbank:WP_201745726.1;Name=WP_201745726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382698.1;locus_tag=LPH58_RS08690;product=hypothetical protein;protein_id=WP_201745726.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2014848 2015138 . - . ID=gene-LPH58_RS08695;Name=LPH58_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08695;old_locus_tag=LPH58_08695 NZ_CP087690.1 GeneMarkS-2+ CDS 2014848 2015138 . - 0 ID=cds-WP_038271516.1;Parent=gene-LPH58_RS08695;Dbxref=Genbank:WP_038271516.1;Name=WP_038271516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08695;product=hypothetical protein;protein_id=WP_038271516.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2015131 2015631 . - . ID=gene-LPH58_RS08700;Name=LPH58_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08700;old_locus_tag=LPH58_08700 NZ_CP087690.1 Protein Homology CDS 2015131 2015631 . - 0 ID=cds-WP_230428232.1;Parent=gene-LPH58_RS08700;Dbxref=Genbank:WP_230428232.1;Name=WP_230428232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893188.1;locus_tag=LPH58_RS08700;product=hypothetical protein;protein_id=WP_230428232.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2015830 2016396 . - . ID=gene-LPH58_RS08705;Name=LPH58_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08705;old_locus_tag=LPH58_08705 NZ_CP087690.1 Protein Homology CDS 2015830 2016396 . - 0 ID=cds-WP_038271519.1;Parent=gene-LPH58_RS08705;Dbxref=Genbank:WP_038271519.1;Name=WP_038271519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088656.1;locus_tag=LPH58_RS08705;product=hypothetical protein;protein_id=WP_038271519.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2016545 2016883 . - . ID=gene-LPH58_RS08710;Name=LPH58_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08710;old_locus_tag=LPH58_08710 NZ_CP087690.1 GeneMarkS-2+ CDS 2016545 2016883 . - 0 ID=cds-WP_152536630.1;Parent=gene-LPH58_RS08710;Dbxref=Genbank:WP_152536630.1;Name=WP_152536630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08710;product=hypothetical protein;protein_id=WP_152536630.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2016876 2017313 . - . ID=gene-LPH58_RS08715;Name=LPH58_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08715;old_locus_tag=LPH58_08715 NZ_CP087690.1 Protein Homology CDS 2016876 2017313 . - 0 ID=cds-WP_038271543.1;Parent=gene-LPH58_RS08715;Dbxref=Genbank:WP_038271543.1;Name=WP_038271543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088654.1;locus_tag=LPH58_RS08715;product=hypothetical protein;protein_id=WP_038271543.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2017567 2018121 . - . ID=gene-LPH58_RS08720;Name=LPH58_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08720;old_locus_tag=LPH58_08720 NZ_CP087690.1 Protein Homology CDS 2017567 2018121 . - 0 ID=cds-WP_038271521.1;Parent=gene-LPH58_RS08720;Dbxref=Genbank:WP_038271521.1;Name=WP_038271521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098139.1;locus_tag=LPH58_RS08720;product=hypothetical protein;protein_id=WP_038271521.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2018072 2018521 . - . ID=gene-LPH58_RS08725;Name=LPH58_RS08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08725;old_locus_tag=LPH58_08725 NZ_CP087690.1 GeneMarkS-2+ CDS 2018072 2018521 . - 0 ID=cds-WP_038271522.1;Parent=gene-LPH58_RS08725;Dbxref=Genbank:WP_038271522.1;Name=WP_038271522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08725;product=hypothetical protein;protein_id=WP_038271522.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2018562 2019437 . - . ID=gene-LPH58_RS08730;Name=LPH58_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08730;old_locus_tag=LPH58_08730 NZ_CP087690.1 Protein Homology CDS 2018562 2019437 . - 0 ID=cds-WP_038271523.1;Parent=gene-LPH58_RS08730;Dbxref=Genbank:WP_038271523.1;Name=WP_038271523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174296.1;locus_tag=LPH58_RS08730;product=polyprenyl synthetase family protein;protein_id=WP_038271523.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2019434 2019700 . - . ID=gene-LPH58_RS08735;Name=LPH58_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08735;old_locus_tag=LPH58_08735 NZ_CP087690.1 Protein Homology CDS 2019434 2019700 . - 0 ID=cds-WP_038271524.1;Parent=gene-LPH58_RS08735;Dbxref=Genbank:WP_038271524.1;Name=WP_038271524.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088658.1;locus_tag=LPH58_RS08735;product=exodeoxyribonuclease VII small subunit;protein_id=WP_038271524.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2019732 2021039 . - . ID=gene-LPH58_RS08740;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LPH58_RS08740;old_locus_tag=LPH58_08740 NZ_CP087690.1 Protein Homology CDS 2019732 2021039 . - 0 ID=cds-WP_038271545.1;Parent=gene-LPH58_RS08740;Dbxref=Genbank:WP_038271545.1;Name=WP_038271545.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851476.1;locus_tag=LPH58_RS08740;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_038271545.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2021439 2022800 . - . ID=gene-LPH58_RS08745;Name=LPH58_RS08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS08745;old_locus_tag=LPH58_08745;pseudo=true NZ_CP087690.1 Protein Homology CDS 2021439 2022800 . - 0 ID=cds-LPH58_RS08745;Parent=gene-LPH58_RS08745;Note=frameshifted;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088661.1;locus_tag=LPH58_RS08745;product=alkaline phosphatase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2023046 2024359 . + . ID=gene-LPH58_RS08750;Name=LPH58_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08750;old_locus_tag=LPH58_08750 NZ_CP087690.1 Protein Homology CDS 2023046 2024359 . + 0 ID=cds-WP_038271525.1;Parent=gene-LPH58_RS08750;Dbxref=Genbank:WP_038271525.1;Name=WP_038271525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338012.1;locus_tag=LPH58_RS08750;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_038271525.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2024829 2025530 . - . ID=gene-LPH58_RS08755;Name=LPH58_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08755;old_locus_tag=LPH58_08755 NZ_CP087690.1 Protein Homology CDS 2024829 2025530 . - 0 ID=cds-WP_081755453.1;Parent=gene-LPH58_RS08755;Dbxref=Genbank:WP_081755453.1;Name=WP_081755453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014508276.1;locus_tag=LPH58_RS08755;product=C40 family peptidase;protein_id=WP_081755453.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2025731 2026270 . - . ID=gene-LPH58_RS08760;Name=LPH58_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08760;old_locus_tag=LPH58_08760 NZ_CP087690.1 Protein Homology CDS 2025731 2026270 . - 0 ID=cds-WP_171898056.1;Parent=gene-LPH58_RS08760;Dbxref=Genbank:WP_171898056.1;Name=WP_171898056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912976.1;locus_tag=LPH58_RS08760;product=C40 family peptidase;protein_id=WP_171898056.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2026386 2026865 . + . ID=gene-LPH58_RS08765;Name=LPH58_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08765;old_locus_tag=LPH58_08765 NZ_CP087690.1 Protein Homology CDS 2026386 2026865 . + 0 ID=cds-WP_038271526.1;Parent=gene-LPH58_RS08765;Dbxref=Genbank:WP_038271526.1;Name=WP_038271526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083483.1;locus_tag=LPH58_RS08765;product=peptidylprolyl isomerase;protein_id=WP_038271526.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2026955 2028196 . + . ID=gene-LPH58_RS08770;Name=LPH58_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08770;old_locus_tag=LPH58_08770 NZ_CP087690.1 Protein Homology CDS 2026955 2028196 . + 0 ID=cds-WP_230428295.1;Parent=gene-LPH58_RS08770;Dbxref=Genbank:WP_230428295.1;Name=WP_230428295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098144.1;locus_tag=LPH58_RS08770;product=DUF418 domain-containing protein;protein_id=WP_230428295.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2028560 2029108 . - . ID=gene-LPH58_RS08775;Name=LPH58_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08775;old_locus_tag=LPH58_08775 NZ_CP087690.1 Protein Homology CDS 2028560 2029108 . - 0 ID=cds-WP_069636201.1;Parent=gene-LPH58_RS08775;Dbxref=Genbank:WP_069636201.1;Name=WP_069636201.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024736.2;locus_tag=LPH58_RS08775;product=transposase;protein_id=WP_069636201.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2029658 2030320 . + . ID=gene-LPH58_RS08780;Name=LPH58_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08780;old_locus_tag=LPH58_08780 NZ_CP087690.1 Protein Homology CDS 2029658 2030320 . + 0 ID=cds-WP_038270444.1;Parent=gene-LPH58_RS08780;Dbxref=Genbank:WP_038270444.1;Name=WP_038270444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182637.1;locus_tag=LPH58_RS08780;product=rhomboid family intramembrane serine protease;protein_id=WP_038270444.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2031098 2031259 . + . ID=gene-LPH58_RS08785;Name=LPH58_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08785;old_locus_tag=LPH58_08785 NZ_CP087690.1 GeneMarkS-2+ CDS 2031098 2031259 . + 0 ID=cds-WP_160165128.1;Parent=gene-LPH58_RS08785;Dbxref=Genbank:WP_160165128.1;Name=WP_160165128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08785;product=hypothetical protein;protein_id=WP_160165128.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2031794 2031970 . - . ID=gene-LPH58_RS08790;Name=LPH58_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08790;old_locus_tag=LPH58_08790 NZ_CP087690.1 GeneMarkS-2+ CDS 2031794 2031970 . - 0 ID=cds-WP_160165127.1;Parent=gene-LPH58_RS08790;Dbxref=Genbank:WP_160165127.1;Name=WP_160165127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08790;product=hypothetical protein;protein_id=WP_160165127.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2032521 2033204 . - . ID=gene-LPH58_RS08795;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LPH58_RS08795;old_locus_tag=LPH58_08795 NZ_CP087690.1 Protein Homology CDS 2032521 2033204 . - 0 ID=cds-WP_114867173.1;Parent=gene-LPH58_RS08795;Dbxref=Genbank:WP_114867173.1;Name=WP_114867173.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851466.1;locus_tag=LPH58_RS08795;product=endonuclease III;protein_id=WP_114867173.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2033204 2033575 . - . ID=gene-LPH58_RS08800;Name=LPH58_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08800;old_locus_tag=LPH58_08800 NZ_CP087690.1 Protein Homology CDS 2033204 2033575 . - 0 ID=cds-WP_038270441.1;Parent=gene-LPH58_RS08800;Dbxref=Genbank:WP_038270441.1;Name=WP_038270441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019185886.1;locus_tag=LPH58_RS08800;product=hypothetical protein;protein_id=WP_038270441.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2033763 2033969 . - . ID=gene-LPH58_RS08805;Name=LPH58_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08805;old_locus_tag=LPH58_08805 NZ_CP087690.1 GeneMarkS-2+ CDS 2033763 2033969 . - 0 ID=cds-WP_160165126.1;Parent=gene-LPH58_RS08805;Dbxref=Genbank:WP_160165126.1;Name=WP_160165126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08805;product=hypothetical protein;protein_id=WP_160165126.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2034381 2035079 . + . ID=gene-LPH58_RS08810;Name=LPH58_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08810;old_locus_tag=LPH58_08810 NZ_CP087690.1 Protein Homology CDS 2034381 2035079 . + 0 ID=cds-WP_038270440.1;Parent=gene-LPH58_RS08810;Dbxref=Genbank:WP_038270440.1;Name=WP_038270440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804447.1;locus_tag=LPH58_RS08810;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_038270440.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2035330 2036034 . + . ID=gene-LPH58_RS08815;Name=LPH58_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08815;old_locus_tag=LPH58_08815 NZ_CP087690.1 Protein Homology CDS 2035330 2036034 . + 0 ID=cds-WP_051482255.1;Parent=gene-LPH58_RS08815;Dbxref=Genbank:WP_051482255.1;Name=WP_051482255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010343964.1;locus_tag=LPH58_RS08815;product=CoA pyrophosphatase;protein_id=WP_051482255.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2036750 2036837 . + . ID=gene-LPH58_RS08820;Name=LPH58_RS08820;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS08820;old_locus_tag=LPH58_08820 NZ_CP087690.1 tRNAscan-SE tRNA 2036750 2036837 . + . ID=rna-LPH58_RS08820;Parent=gene-LPH58_RS08820;anticodon=(pos:2036784..2036786);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS08820;product=tRNA-Ser NZ_CP087690.1 tRNAscan-SE exon 2036750 2036837 . + . ID=exon-LPH58_RS08820-1;Parent=rna-LPH58_RS08820;anticodon=(pos:2036784..2036786);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS08820;product=tRNA-Ser NZ_CP087690.1 RefSeq gene 2037015 2037977 . + . ID=gene-LPH58_RS08825;Name=LPH58_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08825;old_locus_tag=LPH58_08825 NZ_CP087690.1 Protein Homology CDS 2037015 2037977 . + 0 ID=cds-WP_051482254.1;Parent=gene-LPH58_RS08825;Dbxref=Genbank:WP_051482254.1;Name=WP_051482254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LPH58_RS08825;product=acyltransferase;protein_id=WP_051482254.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2038317 2038442 . - . ID=gene-LPH58_RS12005;Name=LPH58_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12005 NZ_CP087690.1 GeneMarkS-2+ CDS 2038317 2038442 . - 0 ID=cds-WP_267903157.1;Parent=gene-LPH58_RS12005;Dbxref=Genbank:WP_267903157.1;Name=WP_267903157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12005;product=hypothetical protein;protein_id=WP_267903157.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2038439 2038858 . - . ID=gene-LPH58_RS08830;Name=LPH58_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08830;old_locus_tag=LPH58_08830 NZ_CP087690.1 GeneMarkS-2+ CDS 2038439 2038858 . - 0 ID=cds-WP_038270439.1;Parent=gene-LPH58_RS08830;Dbxref=Genbank:WP_038270439.1;Name=WP_038270439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08830;product=hypothetical protein;protein_id=WP_038270439.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2039193 2039351 . - . ID=gene-LPH58_RS08835;Name=LPH58_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08835;old_locus_tag=LPH58_08835 NZ_CP087690.1 GeneMarkS-2+ CDS 2039193 2039351 . - 0 ID=cds-WP_160165125.1;Parent=gene-LPH58_RS08835;Dbxref=Genbank:WP_160165125.1;Name=WP_160165125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08835;product=hypothetical protein;protein_id=WP_160165125.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2040386 2041237 . - . ID=gene-LPH58_RS08840;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LPH58_RS08840;old_locus_tag=LPH58_08840 NZ_CP087690.1 Protein Homology CDS 2040386 2041237 . - 0 ID=cds-WP_038270438.1;Parent=gene-LPH58_RS08840;Dbxref=Genbank:WP_038270438.1;Name=WP_038270438.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010340310.1;locus_tag=LPH58_RS08840;product=shikimate dehydrogenase;protein_id=WP_038270438.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2043360 2044169 . + . ID=gene-LPH58_RS08845;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LPH58_RS08845;old_locus_tag=LPH58_08845 NZ_CP087690.1 Protein Homology CDS 2043360 2044169 . + 0 ID=cds-WP_038270437.1;Parent=gene-LPH58_RS08845;Dbxref=Genbank:WP_038270437.1;Name=WP_038270437.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853073.1;locus_tag=LPH58_RS08845;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_038270437.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2044532 2044720 . - . ID=gene-LPH58_RS08850;Name=LPH58_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08850;old_locus_tag=LPH58_08850 NZ_CP087690.1 GeneMarkS-2+ CDS 2044532 2044720 . - 0 ID=cds-WP_114867174.1;Parent=gene-LPH58_RS08850;Dbxref=Genbank:WP_114867174.1;Name=WP_114867174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08850;product=hypothetical protein;protein_id=WP_114867174.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2045949 2046119 . - . ID=gene-LPH58_RS08855;Name=LPH58_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08855;old_locus_tag=LPH58_08855 NZ_CP087690.1 GeneMarkS-2+ CDS 2045949 2046119 . - 0 ID=cds-WP_160165123.1;Parent=gene-LPH58_RS08855;Dbxref=Genbank:WP_160165123.1;Name=WP_160165123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08855;product=hypothetical protein;protein_id=WP_160165123.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2046497 2046943 . - . ID=gene-LPH58_RS08860;Name=LPH58_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08860;old_locus_tag=LPH58_08860 NZ_CP087690.1 GeneMarkS-2+ CDS 2046497 2046943 . - 0 ID=cds-WP_152536576.1;Parent=gene-LPH58_RS08860;Dbxref=Genbank:WP_152536576.1;Name=WP_152536576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS08860;product=hypothetical protein;protein_id=WP_152536576.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2047093 2049345 . - . ID=gene-LPH58_RS08865;Name=LPH58_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08865;old_locus_tag=LPH58_08865 NZ_CP087690.1 Protein Homology CDS 2047093 2049345 . - 0 ID=cds-WP_267903179.1;Parent=gene-LPH58_RS08865;Dbxref=Genbank:WP_267903179.1;Name=WP_267903179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411230.1;locus_tag=LPH58_RS08865;product=protein-disulfide reductase DsbD;protein_id=WP_267903179.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2049384 2049722 . - . ID=gene-LPH58_RS08870;Name=LPH58_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08870;old_locus_tag=LPH58_08870 NZ_CP087690.1 Protein Homology CDS 2049384 2049722 . - 0 ID=cds-WP_038270433.1;Parent=gene-LPH58_RS08870;Dbxref=Genbank:WP_038270433.1;Name=WP_038270433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893143.1;locus_tag=LPH58_RS08870;product=divalent-cation tolerance protein CutA;protein_id=WP_038270433.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2050314 2050601 . + . ID=gene-LPH58_RS08875;Name=LPH58_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08875;old_locus_tag=LPH58_08875 NZ_CP087690.1 Protein Homology CDS 2050314 2050601 . + 0 ID=cds-WP_038270432.1;Parent=gene-LPH58_RS08875;Dbxref=Genbank:WP_038270432.1;Name=WP_038270432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019303525.1;locus_tag=LPH58_RS08875;product=co-chaperone GroES;protein_id=WP_038270432.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2050712 2052352 . + . ID=gene-LPH58_RS08880;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LPH58_RS08880;old_locus_tag=LPH58_08880 NZ_CP087690.1 Protein Homology CDS 2050712 2052352 . + 0 ID=cds-WP_038270431.1;Parent=gene-LPH58_RS08880;Dbxref=Genbank:WP_038270431.1;Name=WP_038270431.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411226.1;locus_tag=LPH58_RS08880;product=chaperonin GroEL;protein_id=WP_038270431.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2053543 2055582 . - . ID=gene-LPH58_RS08885;Name=LPH58_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08885;old_locus_tag=LPH58_08885 NZ_CP087690.1 Protein Homology CDS 2053543 2055582 . - 0 ID=cds-WP_038270430.1;Parent=gene-LPH58_RS08885;Dbxref=Genbank:WP_038270430.1;Name=WP_038270430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083509.1;locus_tag=LPH58_RS08885;product=hypothetical protein;protein_id=WP_038270430.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2055605 2056204 . - . ID=gene-LPH58_RS08890;Name=LPH58_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08890;old_locus_tag=LPH58_08890 NZ_CP087690.1 Protein Homology CDS 2055605 2056204 . - 0 ID=cds-WP_038270429.1;Parent=gene-LPH58_RS08890;Dbxref=Genbank:WP_038270429.1;Name=WP_038270429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852776.1;locus_tag=LPH58_RS08890;product=hypothetical protein;protein_id=WP_038270429.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2056201 2056608 . - . ID=gene-LPH58_RS08895;Name=LPH58_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08895;old_locus_tag=LPH58_08895 NZ_CP087690.1 Protein Homology CDS 2056201 2056608 . - 0 ID=cds-WP_038270428.1;Parent=gene-LPH58_RS08895;Dbxref=Genbank:WP_038270428.1;Name=WP_038270428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088687.1;locus_tag=LPH58_RS08895;product=GtrA family protein;protein_id=WP_038270428.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2056592 2057545 . - . ID=gene-LPH58_RS08900;Name=LPH58_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08900;old_locus_tag=LPH58_08900 NZ_CP087690.1 Protein Homology CDS 2056592 2057545 . - 0 ID=cds-WP_038270427.1;Parent=gene-LPH58_RS08900;Dbxref=Genbank:WP_038270427.1;Name=WP_038270427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083510.1;locus_tag=LPH58_RS08900;product=glycosyltransferase;protein_id=WP_038270427.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2057548 2058492 . - . ID=gene-LPH58_RS08905;Name=LPH58_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08905;old_locus_tag=LPH58_08905 NZ_CP087690.1 Protein Homology CDS 2057548 2058492 . - 0 ID=cds-WP_038270426.1;Parent=gene-LPH58_RS08905;Dbxref=Genbank:WP_038270426.1;Name=WP_038270426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088689.1;locus_tag=LPH58_RS08905;product=SDR family oxidoreductase;protein_id=WP_038270426.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2058679 2059593 . - . ID=gene-LPH58_RS08910;Name=LPH58_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08910;old_locus_tag=LPH58_08910 NZ_CP087690.1 Protein Homology CDS 2058679 2059593 . - 0 ID=cds-WP_038270425.1;Parent=gene-LPH58_RS08910;Dbxref=Genbank:WP_038270425.1;Name=WP_038270425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035851.1;locus_tag=LPH58_RS08910;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_038270425.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2059593 2060633 . - . ID=gene-LPH58_RS08915;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LPH58_RS08915;old_locus_tag=LPH58_08915 NZ_CP087690.1 Protein Homology CDS 2059593 2060633 . - 0 ID=cds-WP_038270424.1;Parent=gene-LPH58_RS08915;Dbxref=Genbank:WP_038270424.1;Name=WP_038270424.1;Ontology_term=GO:0000271,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852782.1;locus_tag=LPH58_RS08915;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_038270424.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2060725 2063268 . - . ID=gene-LPH58_RS08920;Name=LPH58_RS08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08920;old_locus_tag=LPH58_08920 NZ_CP087690.1 Protein Homology CDS 2060725 2063268 . - 0 ID=cds-WP_038270423.1;Parent=gene-LPH58_RS08920;Dbxref=Genbank:WP_038270423.1;Name=WP_038270423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852783.1;locus_tag=LPH58_RS08920;product=glycosyltransferase family 1 protein;protein_id=WP_038270423.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2063272 2064654 . - . ID=gene-LPH58_RS08925;Name=LPH58_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08925;old_locus_tag=LPH58_08925 NZ_CP087690.1 Protein Homology CDS 2063272 2064654 . - 0 ID=cds-WP_038270422.1;Parent=gene-LPH58_RS08925;Dbxref=Genbank:WP_038270422.1;Name=WP_038270422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088692.1;locus_tag=LPH58_RS08925;product=FkbM family methyltransferase;protein_id=WP_038270422.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2064922 2066292 . - . ID=gene-LPH58_RS08930;Name=LPH58_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08930;old_locus_tag=LPH58_08930 NZ_CP087690.1 Protein Homology CDS 2064922 2066292 . - 0 ID=cds-WP_038270421.1;Parent=gene-LPH58_RS08930;Dbxref=Genbank:WP_038270421.1;Name=WP_038270421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157251.1;locus_tag=LPH58_RS08930;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_038270421.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2066438 2066656 . - . ID=gene-LPH58_RS08935;Name=LPH58_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08935;old_locus_tag=LPH58_08935 NZ_CP087690.1 Protein Homology CDS 2066438 2066656 . - 0 ID=cds-WP_038270420.1;Parent=gene-LPH58_RS08935;Dbxref=Genbank:WP_038270420.1;Name=WP_038270420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237985.1;locus_tag=LPH58_RS08935;product=YdcH family protein;protein_id=WP_038270420.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2066985 2067881 . - . ID=gene-LPH58_RS08940;Name=LPH58_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08940;old_locus_tag=LPH58_08940 NZ_CP087690.1 Protein Homology CDS 2066985 2067881 . - 0 ID=cds-WP_038270460.1;Parent=gene-LPH58_RS08940;Dbxref=Genbank:WP_038270460.1;Name=WP_038270460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017161845.1;locus_tag=LPH58_RS08940;product=membrane protein;protein_id=WP_038270460.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2067884 2068276 . - . ID=gene-LPH58_RS08945;Name=LPH58_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08945;old_locus_tag=LPH58_08945 NZ_CP087690.1 Protein Homology CDS 2067884 2068276 . - 0 ID=cds-WP_038270419.1;Parent=gene-LPH58_RS08945;Dbxref=Genbank:WP_038270419.1;Name=WP_038270419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088696.1;locus_tag=LPH58_RS08945;product=DUF4398 domain-containing protein;protein_id=WP_038270419.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2068686 2070965 . + . ID=gene-LPH58_RS08950;Name=LPH58_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08950;old_locus_tag=LPH58_08950 NZ_CP087690.1 Protein Homology CDS 2068686 2070965 . + 0 ID=cds-WP_038270418.1;Parent=gene-LPH58_RS08950;Dbxref=Genbank:WP_038270418.1;Name=WP_038270418.1;Ontology_term=GO:0015891,GO:0015344;gbkey=CDS;go_function=siderophore uptake transmembrane transporter activity|0015344||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088697.1;locus_tag=LPH58_RS08950;product=catecholate siderophore receptor Fiu;protein_id=WP_038270418.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2071009 2071701 . + . ID=gene-LPH58_RS08955;Name=LPH58_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08955;old_locus_tag=LPH58_08955 NZ_CP087690.1 Protein Homology CDS 2071009 2071701 . + 0 ID=cds-WP_038270417.1;Parent=gene-LPH58_RS08955;Dbxref=Genbank:WP_038270417.1;Name=WP_038270417.1;Ontology_term=GO:0005506,GO:0016706,GO:0031418;gbkey=CDS;go_function=iron ion binding|0005506||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA,L-ascorbic acid binding|0031418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088698.1;locus_tag=LPH58_RS08955;product=Fe2+-dependent dioxygenase;protein_id=WP_038270417.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2071710 2072360 . + . ID=gene-LPH58_RS08960;Name=LPH58_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08960;old_locus_tag=LPH58_08960 NZ_CP087690.1 Protein Homology CDS 2071710 2072360 . + 0 ID=cds-WP_038270416.1;Parent=gene-LPH58_RS08960;Dbxref=Genbank:WP_038270416.1;Name=WP_038270416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487779.1;locus_tag=LPH58_RS08960;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_038270416.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2072380 2072892 . + . ID=gene-LPH58_RS08965;Name=LPH58_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08965;old_locus_tag=LPH58_08965 NZ_CP087690.1 Protein Homology CDS 2072380 2072892 . + 0 ID=cds-WP_038270415.1;Parent=gene-LPH58_RS08965;Dbxref=Genbank:WP_038270415.1;Name=WP_038270415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450672.1;locus_tag=LPH58_RS08965;product=DUF2271 domain-containing protein;protein_id=WP_038270415.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2072927 2073730 . + . ID=gene-LPH58_RS08970;Name=LPH58_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08970;old_locus_tag=LPH58_08970 NZ_CP087690.1 Protein Homology CDS 2072927 2073730 . + 0 ID=cds-WP_038270414.1;Parent=gene-LPH58_RS08970;Dbxref=Genbank:WP_038270414.1;Name=WP_038270414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237449.1;locus_tag=LPH58_RS08970;product=DUF4198 domain-containing protein;protein_id=WP_038270414.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2073796 2074767 . + . ID=gene-LPH58_RS08975;Name=LPH58_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08975;old_locus_tag=LPH58_08975 NZ_CP087690.1 Protein Homology CDS 2073796 2074767 . + 0 ID=cds-WP_038270413.1;Parent=gene-LPH58_RS08975;Dbxref=Genbank:WP_038270413.1;Name=WP_038270413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851166.1;locus_tag=LPH58_RS08975;product=FAD:protein FMN transferase;protein_id=WP_038270413.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2074764 2076344 . + . ID=gene-LPH58_RS08980;Name=LPH58_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08980;old_locus_tag=LPH58_08980 NZ_CP087690.1 Protein Homology CDS 2074764 2076344 . + 0 ID=cds-WP_038270412.1;Parent=gene-LPH58_RS08980;Dbxref=Genbank:WP_038270412.1;Name=WP_038270412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019659424.1;locus_tag=LPH58_RS08980;product=sulfite reductase subunit alpha;protein_id=WP_038270412.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2077200 2077529 . - . ID=gene-LPH58_RS08985;Name=LPH58_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08985;old_locus_tag=LPH58_08985 NZ_CP087690.1 Protein Homology CDS 2077200 2077529 . - 0 ID=cds-WP_038270411.1;Parent=gene-LPH58_RS08985;Dbxref=Genbank:WP_038270411.1;Name=WP_038270411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851167.1;locus_tag=LPH58_RS08985;product=helix-hairpin-helix domain-containing protein;protein_id=WP_038270411.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2079421 2080440 . + . ID=gene-LPH58_RS08990;Name=LPH58_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08990;old_locus_tag=LPH58_08990 NZ_CP087690.1 Protein Homology CDS 2079421 2080440 . + 0 ID=cds-WP_171898092.1;Parent=gene-LPH58_RS08990;Dbxref=Genbank:WP_171898092.1;Name=WP_171898092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009591863.1;locus_tag=LPH58_RS08990;product=phosphotransferase;protein_id=WP_171898092.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2080437 2081156 . + . ID=gene-LPH58_RS08995;Name=LPH58_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS08995;old_locus_tag=LPH58_08995 NZ_CP087690.1 Protein Homology CDS 2080437 2081156 . + 0 ID=cds-WP_038270408.1;Parent=gene-LPH58_RS08995;Dbxref=Genbank:WP_038270408.1;Name=WP_038270408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369254.1;locus_tag=LPH58_RS08995;product=nucleotidyltransferase family protein;protein_id=WP_038270408.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2081256 2082038 . - . ID=gene-LPH58_RS09000;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LPH58_RS09000;old_locus_tag=LPH58_09000 NZ_CP087690.1 Protein Homology CDS 2081256 2082038 . - 0 ID=cds-WP_081755397.1;Parent=gene-LPH58_RS09000;Dbxref=Genbank:WP_081755397.1;Name=WP_081755397.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010369247.1;locus_tag=LPH58_RS09000;product=DnaA regulatory inactivator Hda;protein_id=WP_081755397.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2082035 2083192 . - . ID=gene-LPH58_RS09005;Name=LPH58_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09005;old_locus_tag=LPH58_09005 NZ_CP087690.1 Protein Homology CDS 2082035 2083192 . - 0 ID=cds-WP_038270407.1;Parent=gene-LPH58_RS09005;Dbxref=Genbank:WP_038270407.1;Name=WP_038270407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851171.1;locus_tag=LPH58_RS09005;product=AI-2E family transporter;protein_id=WP_038270407.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2083189 2084289 . - . ID=gene-LPH58_RS09010;Name=LPH58_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09010;old_locus_tag=LPH58_09010 NZ_CP087690.1 Protein Homology CDS 2083189 2084289 . - 0 ID=cds-WP_162814105.1;Parent=gene-LPH58_RS09010;Dbxref=Genbank:WP_162814105.1;Name=WP_162814105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382704.1;locus_tag=LPH58_RS09010;product=DUF2066 domain-containing protein;protein_id=WP_162814105.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2084404 2085459 . + . ID=gene-LPH58_RS09015;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LPH58_RS09015;old_locus_tag=LPH58_09015 NZ_CP087690.1 Protein Homology CDS 2084404 2085459 . + 0 ID=cds-WP_038270405.1;Parent=gene-LPH58_RS09015;Dbxref=Genbank:WP_038270405.1;Name=WP_038270405.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098163.1;locus_tag=LPH58_RS09015;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_038270405.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2085548 2086216 . + . ID=gene-LPH58_RS09020;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LPH58_RS09020;old_locus_tag=LPH58_09020 NZ_CP087690.1 Protein Homology CDS 2085548 2086216 . + 0 ID=cds-WP_038270404.1;Parent=gene-LPH58_RS09020;Dbxref=Genbank:WP_038270404.1;Name=WP_038270404.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083533.1;locus_tag=LPH58_RS09020;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_038270404.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2086392 2087135 . + . ID=gene-LPH58_RS09025;Name=LPH58_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09025;old_locus_tag=LPH58_09025 NZ_CP087690.1 Protein Homology CDS 2086392 2087135 . + 0 ID=cds-WP_230428296.1;Parent=gene-LPH58_RS09025;Dbxref=Genbank:WP_230428296.1;Name=WP_230428296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005412504.1;locus_tag=LPH58_RS09025;product=DUF3108 domain-containing protein;protein_id=WP_230428296.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2087139 2087822 . + . ID=gene-LPH58_RS09030;Name=LPH58_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09030;old_locus_tag=LPH58_09030 NZ_CP087690.1 Protein Homology CDS 2087139 2087822 . + 0 ID=cds-WP_038270402.1;Parent=gene-LPH58_RS09030;Dbxref=Genbank:WP_038270402.1;Name=WP_038270402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852582.1;locus_tag=LPH58_RS09030;product=DUF3108 domain-containing protein;protein_id=WP_038270402.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2088388 2089050 . - . ID=gene-LPH58_RS09035;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LPH58_RS09035;old_locus_tag=LPH58_09035 NZ_CP087690.1 Protein Homology CDS 2088388 2089050 . - 0 ID=cds-WP_038270401.1;Parent=gene-LPH58_RS09035;Dbxref=Genbank:WP_038270401.1;Name=WP_038270401.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893106.1;locus_tag=LPH58_RS09035;product=dTMP kinase;protein_id=WP_038270401.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2089946 2092048 . + . ID=gene-LPH58_RS09040;Name=LPH58_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09040;old_locus_tag=LPH58_09040 NZ_CP087690.1 Protein Homology CDS 2089946 2092048 . + 0 ID=cds-WP_038270400.1;Parent=gene-LPH58_RS09040;Dbxref=Genbank:WP_038270400.1;Name=WP_038270400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083537.1;locus_tag=LPH58_RS09040;product=M13 family metallopeptidase;protein_id=WP_038270400.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2093044 2093562 . + . ID=gene-LPH58_RS09045;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=LPH58_RS09045;old_locus_tag=LPH58_09045 NZ_CP087690.1 Protein Homology CDS 2093044 2093562 . + 0 ID=cds-WP_038270397.1;Parent=gene-LPH58_RS09045;Dbxref=Genbank:WP_038270397.1;Name=WP_038270397.1;Ontology_term=GO:0019171;gbkey=CDS;gene=fabA;go_function=3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011035827.1;locus_tag=LPH58_RS09045;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA;protein_id=WP_038270397.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2095149 2096012 . + . ID=gene-LPH58_RS09050;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LPH58_RS09050;old_locus_tag=LPH58_09050 NZ_CP087690.1 Protein Homology CDS 2095149 2096012 . + 0 ID=cds-WP_230428297.1;Parent=gene-LPH58_RS09050;Dbxref=Genbank:WP_230428297.1;Name=WP_230428297.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019397041.1;locus_tag=LPH58_RS09050;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_230428297.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2096051 2096959 . + . ID=gene-LPH58_RS09055;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=LPH58_RS09055;old_locus_tag=LPH58_09055 NZ_CP087690.1 Protein Homology CDS 2096051 2096959 . + 0 ID=cds-WP_038270395.1;Parent=gene-LPH58_RS09055;Dbxref=Genbank:WP_038270395.1;Name=WP_038270395.1;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017154674.1;locus_tag=LPH58_RS09055;product=recombination-associated protein RdgC;protein_id=WP_038270395.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2097029 2097790 . + . ID=gene-LPH58_RS09060;Name=LPH58_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09060;old_locus_tag=LPH58_09060 NZ_CP087690.1 Protein Homology CDS 2097029 2097790 . + 0 ID=cds-WP_038270394.1;Parent=gene-LPH58_RS09060;Dbxref=Genbank:WP_038270394.1;Name=WP_038270394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088764.1;locus_tag=LPH58_RS09060;product=SprT family zinc-dependent metalloprotease;protein_id=WP_038270394.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2098121 2099083 . - . ID=gene-LPH58_RS09065;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LPH58_RS09065;old_locus_tag=LPH58_09065 NZ_CP087690.1 Protein Homology CDS 2098121 2099083 . - 0 ID=cds-WP_038270393.1;Parent=gene-LPH58_RS09065;Dbxref=Genbank:WP_038270393.1;Name=WP_038270393.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852273.1;locus_tag=LPH58_RS09065;product=ferrochelatase;protein_id=WP_038270393.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2099252 2100145 . + . ID=gene-LPH58_RS09070;Name=LPH58_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09070;old_locus_tag=LPH58_09070 NZ_CP087690.1 Protein Homology CDS 2099252 2100145 . + 0 ID=cds-WP_038270392.1;Parent=gene-LPH58_RS09070;Dbxref=Genbank:WP_038270392.1;Name=WP_038270392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852274.1;locus_tag=LPH58_RS09070;product=YSC84-related protein;protein_id=WP_038270392.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2100220 2100435 . + . ID=gene-LPH58_RS09075;Name=LPH58_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09075;old_locus_tag=LPH58_09075 NZ_CP087690.1 Protein Homology CDS 2100220 2100435 . + 0 ID=cds-WP_038270391.1;Parent=gene-LPH58_RS09075;Dbxref=Genbank:WP_038270391.1;Name=WP_038270391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083544.1;locus_tag=LPH58_RS09075;product=Sec-independent protein translocase subunit TatA;protein_id=WP_038270391.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2100453 2100875 . + . ID=gene-LPH58_RS09080;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LPH58_RS09080;old_locus_tag=LPH58_09080 NZ_CP087690.1 Protein Homology CDS 2100453 2100875 . + 0 ID=cds-WP_038270390.1;Parent=gene-LPH58_RS09080;Dbxref=Genbank:WP_038270390.1;Name=WP_038270390.1;Ontology_term=GO:0015031,GO:0015628;gbkey=CDS;gene=tatB;go_process=protein transport|0015031||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088772.1;locus_tag=LPH58_RS09080;product=Sec-independent protein translocase protein TatB;protein_id=WP_038270390.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2100872 2101612 . + . ID=gene-LPH58_RS09085;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LPH58_RS09085;old_locus_tag=LPH58_09085 NZ_CP087690.1 Protein Homology CDS 2100872 2101612 . + 0 ID=cds-WP_038270389.1;Parent=gene-LPH58_RS09085;Dbxref=Genbank:WP_038270389.1;Name=WP_038270389.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893088.1;locus_tag=LPH58_RS09085;product=twin-arginine translocase subunit TatC;protein_id=WP_038270389.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2101676 2102548 . - . ID=gene-LPH58_RS09090;Name=LPH58_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09090;old_locus_tag=LPH58_09090 NZ_CP087690.1 Protein Homology CDS 2101676 2102548 . - 0 ID=cds-WP_038270388.1;Parent=gene-LPH58_RS09090;Dbxref=Genbank:WP_038270388.1;Name=WP_038270388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088776.1;locus_tag=LPH58_RS09090;product=BPSS1780 family membrane protein;protein_id=WP_038270388.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2102797 2103519 . - . ID=gene-LPH58_RS09095;Name=LPH58_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09095;old_locus_tag=LPH58_09095 NZ_CP087690.1 Protein Homology CDS 2102797 2103519 . - 0 ID=cds-WP_038270387.1;Parent=gene-LPH58_RS09095;Dbxref=Genbank:WP_038270387.1;Name=WP_038270387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088782.1;locus_tag=LPH58_RS09095;product=glutamine amidotransferase;protein_id=WP_038270387.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2104849 2105271 . + . ID=gene-LPH58_RS09100;Name=azu;gbkey=Gene;gene=azu;gene_biotype=protein_coding;locus_tag=LPH58_RS09100;old_locus_tag=LPH58_09100 NZ_CP087690.1 Protein Homology CDS 2104849 2105271 . + 0 ID=cds-WP_038270457.1;Parent=gene-LPH58_RS09100;Dbxref=Genbank:WP_038270457.1;Name=WP_038270457.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;gene=azu;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237306.1;locus_tag=LPH58_RS09100;product=azurin;protein_id=WP_038270457.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2106079 2107098 . - . ID=gene-LPH58_RS09105;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LPH58_RS09105;old_locus_tag=LPH58_09105 NZ_CP087690.1 Protein Homology CDS 2106079 2107098 . - 0 ID=cds-WP_038270385.1;Parent=gene-LPH58_RS09105;Dbxref=Genbank:WP_038270385.1;Name=WP_038270385.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098172.1;locus_tag=LPH58_RS09105;product=ribosome small subunit-dependent GTPase A;protein_id=WP_038270385.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2107494 2107859 . - . ID=gene-LPH58_RS09110;Name=LPH58_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09110;old_locus_tag=LPH58_09110 NZ_CP087690.1 Protein Homology CDS 2107494 2107859 . - 0 ID=cds-WP_038270384.1;Parent=gene-LPH58_RS09110;Dbxref=Genbank:WP_038270384.1;Name=WP_038270384.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893080.1;locus_tag=LPH58_RS09110;product=YraN family protein;protein_id=WP_038270384.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2107863 2109593 . - . ID=gene-LPH58_RS09115;Name=LPH58_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09115;old_locus_tag=LPH58_09115 NZ_CP087690.1 Protein Homology CDS 2107863 2109593 . - 0 ID=cds-WP_038270383.1;Parent=gene-LPH58_RS09115;Dbxref=Genbank:WP_038270383.1;Name=WP_038270383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083552.1;locus_tag=LPH58_RS09115;product=penicillin-binding protein activator;protein_id=WP_038270383.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2109675 2110496 . + . ID=gene-LPH58_RS09120;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LPH58_RS09120;old_locus_tag=LPH58_09120 NZ_CP087690.1 Protein Homology CDS 2109675 2110496 . + 0 ID=cds-WP_038270382.1;Parent=gene-LPH58_RS09120;Dbxref=Genbank:WP_038270382.1;Name=WP_038270382.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088794.1;locus_tag=LPH58_RS09120;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_038270382.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2111571 2114687 . + . ID=gene-LPH58_RS09125;Name=LPH58_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09125;old_locus_tag=LPH58_09125 NZ_CP087690.1 Protein Homology CDS 2111571 2114687 . + 0 ID=cds-WP_038270380.1;Parent=gene-LPH58_RS09125;Dbxref=Genbank:WP_038270380.1;Name=WP_038270380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852285.1;locus_tag=LPH58_RS09125;product=TonB-dependent receptor;protein_id=WP_038270380.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2114856 2116937 . + . ID=gene-LPH58_RS09130;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LPH58_RS09130;old_locus_tag=LPH58_09130 NZ_CP087690.1 Protein Homology CDS 2114856 2116937 . + 0 ID=cds-WP_038270456.1;Parent=gene-LPH58_RS09130;Dbxref=Genbank:WP_038270456.1;Name=WP_038270456.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019304414.1;locus_tag=LPH58_RS09130;product=methionine--tRNA ligase;protein_id=WP_038270456.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2117006 2117260 . - . ID=gene-LPH58_RS09135;Name=LPH58_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09135;old_locus_tag=LPH58_09135 NZ_CP087690.1 GeneMarkS-2+ CDS 2117006 2117260 . - 0 ID=cds-WP_152536574.1;Parent=gene-LPH58_RS09135;Dbxref=Genbank:WP_152536574.1;Name=WP_152536574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09135;product=hypothetical protein;protein_id=WP_152536574.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2118307 2118726 . + . ID=gene-LPH58_RS09140;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=LPH58_RS09140;old_locus_tag=LPH58_09140 NZ_CP087690.1 Protein Homology CDS 2118307 2118726 . + 0 ID=cds-WP_038270455.1;Parent=gene-LPH58_RS09140;Dbxref=Genbank:WP_038270455.1;Name=WP_038270455.1;gbkey=CDS;gene=rnfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088821.1;locus_tag=LPH58_RS09140;product=Rnf electron transport complex subunit RnfB;protein_id=WP_038270455.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2118862 2119038 . + . ID=gene-LPH58_RS09145;Name=LPH58_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09145;old_locus_tag=LPH58_09145 NZ_CP087690.1 GeneMarkS-2+ CDS 2118862 2119038 . + 0 ID=cds-WP_160165122.1;Parent=gene-LPH58_RS09145;Dbxref=Genbank:WP_160165122.1;Name=WP_160165122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09145;product=hypothetical protein;protein_id=WP_160165122.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2120433 2120816 . - . ID=gene-LPH58_RS09150;Name=LPH58_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09150;old_locus_tag=LPH58_09150 NZ_CP087690.1 GeneMarkS-2+ CDS 2120433 2120816 . - 0 ID=cds-WP_051482252.1;Parent=gene-LPH58_RS09150;Dbxref=Genbank:WP_051482252.1;Name=WP_051482252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09150;product=hypothetical protein;protein_id=WP_051482252.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2121010 2121261 . + . ID=gene-LPH58_RS09155;Name=LPH58_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09155;old_locus_tag=LPH58_09155 NZ_CP087690.1 GeneMarkS-2+ CDS 2121010 2121261 . + 0 ID=cds-WP_160165121.1;Parent=gene-LPH58_RS09155;Dbxref=Genbank:WP_160165121.1;Name=WP_160165121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09155;product=hypothetical protein;protein_id=WP_160165121.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2121943 2122149 . - . ID=gene-LPH58_RS09160;Name=LPH58_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09160;old_locus_tag=LPH58_09160 NZ_CP087690.1 GeneMarkS-2+ CDS 2121943 2122149 . - 0 ID=cds-WP_160165120.1;Parent=gene-LPH58_RS09160;Dbxref=Genbank:WP_160165120.1;Name=WP_160165120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09160;product=hypothetical protein;protein_id=WP_160165120.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2122201 2122482 . + . ID=gene-LPH58_RS09165;Name=LPH58_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09165;old_locus_tag=LPH58_09165 NZ_CP087690.1 Protein Homology CDS 2122201 2122482 . + 0 ID=cds-WP_038270378.1;Parent=gene-LPH58_RS09165;Dbxref=Genbank:WP_038270378.1;Name=WP_038270378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164775.1;locus_tag=LPH58_RS09165;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_038270378.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2122551 2123750 . - . ID=gene-LPH58_RS09170;Name=LPH58_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09170;old_locus_tag=LPH58_09170 NZ_CP087690.1 Protein Homology CDS 2122551 2123750 . - 0 ID=cds-WP_230428506.1;Parent=gene-LPH58_RS09170;Dbxref=Genbank:WP_230428506.1;Name=WP_230428506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607328.1;locus_tag=LPH58_RS09170;product=alpha/beta hydrolase;protein_id=WP_230428506.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2124538 2124921 . - . ID=gene-LPH58_RS09175;Name=LPH58_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09175;old_locus_tag=LPH58_09175 NZ_CP087690.1 Protein Homology CDS 2124538 2124921 . - 0 ID=cds-WP_038270376.1;Parent=gene-LPH58_RS09175;Dbxref=Genbank:WP_038270376.1;Name=WP_038270376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852211.1;locus_tag=LPH58_RS09175;product=hypothetical protein;protein_id=WP_038270376.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2124995 2125285 . - . ID=gene-LPH58_RS09180;Name=LPH58_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09180;old_locus_tag=LPH58_09180 NZ_CP087690.1 Protein Homology CDS 2124995 2125285 . - 0 ID=cds-WP_051482251.1;Parent=gene-LPH58_RS09180;Dbxref=Genbank:WP_051482251.1;Name=WP_051482251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023857.2;locus_tag=LPH58_RS09180;product=BrnA antitoxin family protein;protein_id=WP_051482251.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2125455 2126765 . - . ID=gene-LPH58_RS09185;Name=LPH58_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09185;old_locus_tag=LPH58_09185 NZ_CP087690.1 Protein Homology CDS 2125455 2126765 . - 0 ID=cds-WP_038270375.1;Parent=gene-LPH58_RS09185;Dbxref=Genbank:WP_038270375.1;Name=WP_038270375.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013696.2;locus_tag=LPH58_RS09185;product=M20 family metallopeptidase;protein_id=WP_038270375.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2126948 2127073 . - . ID=gene-LPH58_RS12010;Name=LPH58_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12010 NZ_CP087690.1 GeneMarkS-2+ CDS 2126948 2127073 . - 0 ID=cds-WP_267903158.1;Parent=gene-LPH58_RS12010;Dbxref=Genbank:WP_267903158.1;Name=WP_267903158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12010;product=hypothetical protein;protein_id=WP_267903158.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2127088 2127336 . - . ID=gene-LPH58_RS09190;Name=LPH58_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09190;old_locus_tag=LPH58_09190 NZ_CP087690.1 Protein Homology CDS 2127088 2127336 . - 0 ID=cds-WP_114867176.1;Parent=gene-LPH58_RS09190;Dbxref=Genbank:WP_114867176.1;Name=WP_114867176.1;Ontology_term=GO:0004252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: protein motif:HMM:NF013827.2;locus_tag=LPH58_RS09190;product=rhomboid family intramembrane serine protease;protein_id=WP_114867176.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2127333 2127575 . - . ID=gene-LPH58_RS09195;Name=LPH58_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09195;old_locus_tag=LPH58_09195 NZ_CP087690.1 GeneMarkS-2+ CDS 2127333 2127575 . - 0 ID=cds-WP_152536573.1;Parent=gene-LPH58_RS09195;Dbxref=Genbank:WP_152536573.1;Name=WP_152536573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09195;product=hypothetical protein;protein_id=WP_152536573.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2127910 2127986 . - . ID=gene-LPH58_RS09200;Name=LPH58_RS09200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS09200;old_locus_tag=LPH58_09200 NZ_CP087690.1 tRNAscan-SE tRNA 2127910 2127986 . - . ID=rna-LPH58_RS09200;Parent=gene-LPH58_RS09200;anticodon=(pos:complement(2127950..2127952));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09200;product=tRNA-Asn NZ_CP087690.1 tRNAscan-SE exon 2127910 2127986 . - . ID=exon-LPH58_RS09200-1;Parent=rna-LPH58_RS09200;anticodon=(pos:complement(2127950..2127952));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09200;product=tRNA-Asn NZ_CP087690.1 RefSeq gene 2128091 2128492 . - . ID=gene-LPH58_RS09205;Name=LPH58_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09205;old_locus_tag=LPH58_09205 NZ_CP087690.1 Protein Homology CDS 2128091 2128492 . - 0 ID=cds-WP_200866181.1;Parent=gene-LPH58_RS09205;Dbxref=Genbank:WP_200866181.1;Name=WP_200866181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382713.1;locus_tag=LPH58_RS09205;product=type IV pilin protein;protein_id=WP_200866181.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2128543 2133108 . - . ID=gene-LPH58_RS09210;Name=LPH58_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09210;old_locus_tag=LPH58_09210 NZ_CP087690.1 Protein Homology CDS 2128543 2133108 . - 0 ID=cds-WP_038270373.1;Parent=gene-LPH58_RS09210;Dbxref=Genbank:WP_038270373.1;Name=WP_038270373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338034.1;locus_tag=LPH58_RS09210;product=pilus assembly protein;protein_id=WP_038270373.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2133112 2133603 . - . ID=gene-LPH58_RS09215;Name=LPH58_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09215;old_locus_tag=LPH58_09215 NZ_CP087690.1 Protein Homology CDS 2133112 2133603 . - 0 ID=cds-WP_230428235.1;Parent=gene-LPH58_RS09215;Dbxref=Genbank:WP_230428235.1;Name=WP_230428235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089766.1;locus_tag=LPH58_RS09215;product=PilX N-terminal domain-containing pilus assembly protein;protein_id=WP_230428235.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2133606 2134862 . - . ID=gene-LPH58_RS09220;Name=LPH58_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09220;old_locus_tag=LPH58_09220 NZ_CP087690.1 Protein Homology CDS 2133606 2134862 . - 0 ID=cds-WP_038270371.1;Parent=gene-LPH58_RS09220;Dbxref=Genbank:WP_038270371.1;Name=WP_038270371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851179.1;locus_tag=LPH58_RS09220;product=PilW family protein;protein_id=WP_038270371.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2134859 2135305 . - . ID=gene-LPH58_RS09225;Name=pilV;gbkey=Gene;gene=pilV;gene_biotype=protein_coding;locus_tag=LPH58_RS09225;old_locus_tag=LPH58_09225 NZ_CP087690.1 Protein Homology CDS 2134859 2135305 . - 0 ID=cds-WP_230428236.1;Parent=gene-LPH58_RS09225;Dbxref=Genbank:WP_230428236.1;Name=WP_230428236.1;gbkey=CDS;gene=pilV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914248.1;locus_tag=LPH58_RS09225;product=type IV pilus modification protein PilV;protein_id=WP_230428236.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2135338 2135811 . - . ID=gene-LPH58_RS09230;Name=LPH58_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09230;old_locus_tag=LPH58_09230 NZ_CP087690.1 Protein Homology CDS 2135338 2135811 . - 0 ID=cds-WP_230428237.1;Parent=gene-LPH58_RS09230;Dbxref=Genbank:WP_230428237.1;Name=WP_230428237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019337159.1;locus_tag=LPH58_RS09230;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_230428237.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2135995 2137368 . - . ID=gene-LPH58_RS09235;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=LPH58_RS09235;old_locus_tag=LPH58_09235 NZ_CP087690.1 Protein Homology CDS 2135995 2137368 . - 0 ID=cds-WP_038270452.1;Parent=gene-LPH58_RS09235;Dbxref=Genbank:WP_038270452.1;Name=WP_038270452.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083569.1;locus_tag=LPH58_RS09235;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_038270452.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2138869 2140425 . - . ID=gene-LPH58_RS09240;Name=LPH58_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09240;old_locus_tag=LPH58_09240 NZ_CP087690.1 Protein Homology CDS 2138869 2140425 . - 0 ID=cds-WP_038270368.1;Parent=gene-LPH58_RS09240;Dbxref=Genbank:WP_038270368.1;Name=WP_038270368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098186.1;locus_tag=LPH58_RS09240;product=EAL domain-containing protein;protein_id=WP_038270368.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2143612 2143758 . + . ID=gene-LPH58_RS09245;Name=LPH58_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09245;old_locus_tag=LPH58_09245 NZ_CP087690.1 GeneMarkS-2+ CDS 2143612 2143758 . + 0 ID=cds-WP_152536571.1;Parent=gene-LPH58_RS09245;Dbxref=Genbank:WP_152536571.1;Name=WP_152536571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09245;product=AlpA family phage regulatory protein;protein_id=WP_152536571.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2144448 2145587 . + . ID=gene-LPH58_RS09250;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=LPH58_RS09250;old_locus_tag=LPH58_09250 NZ_CP087690.1 Protein Homology CDS 2144448 2145587 . + 0 ID=cds-WP_038270362.1;Parent=gene-LPH58_RS09250;Dbxref=Genbank:WP_038270362.1;Name=WP_038270362.1;gbkey=CDS;gene=moeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851185.1;locus_tag=LPH58_RS09250;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_038270362.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2145808 2147208 . - . ID=gene-LPH58_RS09255;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LPH58_RS09255;old_locus_tag=LPH58_09255 NZ_CP087690.1 Protein Homology CDS 2145808 2147208 . - 0 ID=cds-WP_038270360.1;Parent=gene-LPH58_RS09255;Dbxref=Genbank:WP_038270360.1;Name=WP_038270360.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014160877.1;locus_tag=LPH58_RS09255;product=ribosome biogenesis GTPase Der;protein_id=WP_038270360.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2147226 2148449 . - . ID=gene-LPH58_RS09260;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LPH58_RS09260;old_locus_tag=LPH58_09260 NZ_CP087690.1 Protein Homology CDS 2147226 2148449 . - 0 ID=cds-WP_038270359.1;Parent=gene-LPH58_RS09260;Dbxref=Genbank:WP_038270359.1;Name=WP_038270359.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083573.1;locus_tag=LPH58_RS09260;product=outer membrane protein assembly factor BamB;protein_id=WP_038270359.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2148450 2149088 . - . ID=gene-LPH58_RS09265;Name=LPH58_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09265;old_locus_tag=LPH58_09265 NZ_CP087690.1 Protein Homology CDS 2148450 2149088 . - 0 ID=cds-WP_038270358.1;Parent=gene-LPH58_RS09265;Dbxref=Genbank:WP_038270358.1;Name=WP_038270358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503367.1;locus_tag=LPH58_RS09265;product=YfgM family protein;protein_id=WP_038270358.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2149165 2150031 . - . ID=gene-LPH58_RS09270;Name=LPH58_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09270;old_locus_tag=LPH58_09270 NZ_CP087690.1 Protein Homology CDS 2149165 2150031 . - 0 ID=cds-WP_051482248.1;Parent=gene-LPH58_RS09270;Dbxref=Genbank:WP_051482248.1;Name=WP_051482248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083575.1;locus_tag=LPH58_RS09270;product=helix-turn-helix domain-containing protein;protein_id=WP_051482248.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2150038 2150775 . - . ID=gene-LPH58_RS09275;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=LPH58_RS09275;old_locus_tag=LPH58_09275 NZ_CP087690.1 Protein Homology CDS 2150038 2150775 . - 0 ID=cds-WP_230428239.1;Parent=gene-LPH58_RS09275;Dbxref=Genbank:WP_230428239.1;Name=WP_230428239.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892988.1;locus_tag=LPH58_RS09275;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_230428239.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2150831 2152045 . - . ID=gene-LPH58_RS09280;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LPH58_RS09280;old_locus_tag=LPH58_09280 NZ_CP087690.1 Protein Homology CDS 2150831 2152045 . - 0 ID=cds-WP_038270356.1;Parent=gene-LPH58_RS09280;Dbxref=Genbank:WP_038270356.1;Name=WP_038270356.1;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089782.1;locus_tag=LPH58_RS09280;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_038270356.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2152056 2152481 . - . ID=gene-LPH58_RS09285;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LPH58_RS09285;old_locus_tag=LPH58_09285 NZ_CP087690.1 Protein Homology CDS 2152056 2152481 . - 0 ID=cds-WP_038270355.1;Parent=gene-LPH58_RS09285;Dbxref=Genbank:WP_038270355.1;Name=WP_038270355.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005409295.1;locus_tag=LPH58_RS09285;product=nucleoside-diphosphate kinase;protein_id=WP_038270355.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2155730 2156734 . + . ID=gene-LPH58_RS09290;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LPH58_RS09290;old_locus_tag=LPH58_09290 NZ_CP087690.1 Protein Homology CDS 2155730 2156734 . + 0 ID=cds-WP_038270354.1;Parent=gene-LPH58_RS09290;Dbxref=Genbank:WP_038270354.1;Name=WP_038270354.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851191.1;locus_tag=LPH58_RS09290;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_038270354.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2157620 2158912 . - . ID=gene-LPH58_RS09295;Name=LPH58_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09295;old_locus_tag=LPH58_09295 NZ_CP087690.1 Protein Homology CDS 2157620 2158912 . - 0 ID=cds-WP_038270352.1;Parent=gene-LPH58_RS09295;Dbxref=Genbank:WP_038270352.1;Name=WP_038270352.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903917.1;locus_tag=LPH58_RS09295;product=adenylosuccinate synthase;protein_id=WP_038270352.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2159136 2159321 . - . ID=gene-LPH58_RS09300;Name=LPH58_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09300;old_locus_tag=LPH58_09300 NZ_CP087690.1 Protein Homology CDS 2159136 2159321 . - 0 ID=cds-WP_038270351.1;Parent=gene-LPH58_RS09300;Dbxref=Genbank:WP_038270351.1;Name=WP_038270351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089787.1;locus_tag=LPH58_RS09300;product=DUF2065 family protein;protein_id=WP_038270351.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2159478 2160341 . - . ID=gene-LPH58_RS09305;Name=LPH58_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09305;old_locus_tag=LPH58_09305 NZ_CP087690.1 Protein Homology CDS 2159478 2160341 . - 0 ID=cds-WP_038270350.1;Parent=gene-LPH58_RS09305;Dbxref=Genbank:WP_038270350.1;Name=WP_038270350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083581.1;locus_tag=LPH58_RS09305;product=protease modulator HflC;protein_id=WP_038270350.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2160338 2161477 . - . ID=gene-LPH58_RS09310;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LPH58_RS09310;old_locus_tag=LPH58_09310 NZ_CP087690.1 Protein Homology CDS 2160338 2161477 . - 0 ID=cds-WP_038270349.1;Parent=gene-LPH58_RS09310;Dbxref=Genbank:WP_038270349.1;Name=WP_038270349.1;Ontology_term=GO:0045861,GO:0003674,GO:0030288;gbkey=CDS;gene=hflK;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=molecular_function|0003674||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851193.1;locus_tag=LPH58_RS09310;product=FtsH protease activity modulator HflK;protein_id=WP_038270349.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2161608 2162618 . + . ID=gene-LPH58_RS09315;Name=LPH58_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09315;old_locus_tag=LPH58_09315 NZ_CP087690.1 Protein Homology CDS 2161608 2162618 . + 0 ID=cds-WP_038270348.1;Parent=gene-LPH58_RS09315;Dbxref=Genbank:WP_038270348.1;Name=WP_038270348.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005418337.1;locus_tag=LPH58_RS09315;product=acryloyl-CoA reductase;protein_id=WP_038270348.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2162711 2163097 . + . ID=gene-LPH58_RS09320;Name=pilH;gbkey=Gene;gene=pilH;gene_biotype=protein_coding;locus_tag=LPH58_RS09320;old_locus_tag=LPH58_09320 NZ_CP087690.1 Protein Homology CDS 2162711 2163097 . + 0 ID=cds-WP_038270450.1;Parent=gene-LPH58_RS09320;Dbxref=Genbank:WP_038270450.1;Name=WP_038270450.1;gbkey=CDS;gene=pilH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083584.1;locus_tag=LPH58_RS09320;product=twitching motility response regulator PilH;protein_id=WP_038270450.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2164433 2164783 . - . ID=gene-LPH58_RS09325;Name=LPH58_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09325;old_locus_tag=LPH58_09325 NZ_CP087690.1 Protein Homology CDS 2164433 2164783 . - 0 ID=cds-WP_038270449.1;Parent=gene-LPH58_RS09325;Dbxref=Genbank:WP_038270449.1;Name=WP_038270449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083585.1;locus_tag=LPH58_RS09325;product=DMT family protein;protein_id=WP_038270449.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2166037 2166408 . - . ID=gene-LPH58_RS09330;Name=LPH58_RS09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS09330;old_locus_tag=LPH58_09330;partial=true;pseudo=true;start_range=.,2166037 NZ_CP087690.1 Protein Homology CDS 2166037 2166408 . - 0 ID=cds-LPH58_RS09330;Parent=gene-LPH58_RS09330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970417.1;locus_tag=LPH58_RS09330;partial=true;product=H-NS family nucleoid-associated regulatory protein;pseudo=true;start_range=.,2166037;transl_table=11 NZ_CP087690.1 RefSeq gene 2166557 2168251 . - . ID=gene-LPH58_RS09335;Name=LPH58_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09335;old_locus_tag=LPH58_09335 NZ_CP087690.1 Protein Homology CDS 2166557 2168251 . - 0 ID=cds-WP_038270346.1;Parent=gene-LPH58_RS09335;Dbxref=Genbank:WP_038270346.1;Name=WP_038270346.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157647.1;locus_tag=LPH58_RS09335;product=proline--tRNA ligase;protein_id=WP_038270346.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2168344 2168715 . - . ID=gene-LPH58_RS09340;Name=LPH58_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09340;old_locus_tag=LPH58_09340 NZ_CP087690.1 Protein Homology CDS 2168344 2168715 . - 0 ID=cds-WP_038270345.1;Parent=gene-LPH58_RS09340;Dbxref=Genbank:WP_038270345.1;Name=WP_038270345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851197.1;locus_tag=LPH58_RS09340;product=DUF4124 domain-containing protein;protein_id=WP_038270345.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2168876 2169646 . + . ID=gene-LPH58_RS09345;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LPH58_RS09345;old_locus_tag=LPH58_09345 NZ_CP087690.1 Protein Homology CDS 2168876 2169646 . + 0 ID=cds-WP_038270343.1;Parent=gene-LPH58_RS09345;Dbxref=Genbank:WP_038270343.1;Name=WP_038270343.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083589.1;locus_tag=LPH58_RS09345;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_038270343.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2169655 2170068 . + . ID=gene-LPH58_RS09350;Name=LPH58_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09350;old_locus_tag=LPH58_09350 NZ_CP087690.1 Protein Homology CDS 2169655 2170068 . + 0 ID=cds-WP_230428240.1;Parent=gene-LPH58_RS09350;Dbxref=Genbank:WP_230428240.1;Name=WP_230428240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851198.1;locus_tag=LPH58_RS09350;product=hypothetical protein;protein_id=WP_230428240.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2170069 2170539 . + . ID=gene-LPH58_RS09355;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LPH58_RS09355;old_locus_tag=LPH58_09355 NZ_CP087690.1 Protein Homology CDS 2170069 2170539 . + 0 ID=cds-WP_038270341.1;Parent=gene-LPH58_RS09355;Dbxref=Genbank:WP_038270341.1;Name=WP_038270341.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089802.1;locus_tag=LPH58_RS09355;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_038270341.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2171782 2172180 . - . ID=gene-LPH58_RS09360;Name=LPH58_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09360;old_locus_tag=LPH58_09360 NZ_CP087690.1 GeneMarkS-2+ CDS 2171782 2172180 . - 0 ID=cds-WP_038270340.1;Parent=gene-LPH58_RS09360;Dbxref=Genbank:WP_038270340.1;Name=WP_038270340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09360;product=hypothetical protein;protein_id=WP_038270340.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2172700 2172915 . - . ID=gene-LPH58_RS09365;Name=LPH58_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09365;old_locus_tag=LPH58_09365 NZ_CP087690.1 GeneMarkS-2+ CDS 2172700 2172915 . - 0 ID=cds-WP_152536570.1;Parent=gene-LPH58_RS09365;Dbxref=Genbank:WP_152536570.1;Name=WP_152536570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09365;product=hypothetical protein;protein_id=WP_152536570.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2173158 2175332 . - . ID=gene-LPH58_RS09370;Name=LPH58_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09370;old_locus_tag=LPH58_09370 NZ_CP087690.1 Protein Homology CDS 2173158 2175332 . - 0 ID=cds-WP_038270448.1;Parent=gene-LPH58_RS09370;Dbxref=Genbank:WP_038270448.1;Name=WP_038270448.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083592.1;locus_tag=LPH58_RS09370;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_038270448.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2175893 2177188 . - . ID=gene-LPH58_RS09375;Name=LPH58_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09375;old_locus_tag=LPH58_09375 NZ_CP087690.1 Protein Homology CDS 2175893 2177188 . - 0 ID=cds-WP_051482247.1;Parent=gene-LPH58_RS09375;Dbxref=Genbank:WP_051482247.1;Name=WP_051482247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083593.1;locus_tag=LPH58_RS09375;product=mechanosensitive ion channel family protein;protein_id=WP_051482247.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2177422 2177784 . - . ID=gene-LPH58_RS09380;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=LPH58_RS09380;old_locus_tag=LPH58_09380 NZ_CP087690.1 Protein Homology CDS 2177422 2177784 . - 0 ID=cds-WP_038270338.1;Parent=gene-LPH58_RS09380;Dbxref=Genbank:WP_038270338.1;Name=WP_038270338.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005996916.1;locus_tag=LPH58_RS09380;product=dihydroneopterin aldolase;protein_id=WP_038270338.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2177858 2178913 . - . ID=gene-LPH58_RS09385;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LPH58_RS09385;old_locus_tag=LPH58_09385 NZ_CP087690.1 Protein Homology CDS 2177858 2178913 . - 0 ID=cds-WP_038270337.1;Parent=gene-LPH58_RS09385;Dbxref=Genbank:WP_038270337.1;Name=WP_038270337.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083595.1;locus_tag=LPH58_RS09385;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_038270337.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2179085 2179300 . + . ID=gene-LPH58_RS09390;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LPH58_RS09390;old_locus_tag=LPH58_09390 NZ_CP087690.1 Protein Homology CDS 2179085 2179300 . + 0 ID=cds-WP_038270336.1;Parent=gene-LPH58_RS09390;Dbxref=Genbank:WP_038270336.1;Name=WP_038270336.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011235429.1;locus_tag=LPH58_RS09390;product=30S ribosomal protein S21;protein_id=WP_038270336.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2179496 2179942 . + . ID=gene-LPH58_RS09395;Name=LPH58_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09395;old_locus_tag=LPH58_09395 NZ_CP087690.1 Protein Homology CDS 2179496 2179942 . + 0 ID=cds-WP_038270335.1;Parent=gene-LPH58_RS09395;Dbxref=Genbank:WP_038270335.1;Name=WP_038270335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038898.1;locus_tag=LPH58_RS09395;product=GatB/YqeY domain-containing protein;protein_id=WP_038270335.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2180197 2181126 . + . ID=gene-LPH58_RS09400;Name=LPH58_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09400;old_locus_tag=LPH58_09400 NZ_CP087690.1 Protein Homology CDS 2180197 2181126 . + 0 ID=cds-WP_230428241.1;Parent=gene-LPH58_RS09400;Dbxref=Genbank:WP_230428241.1;Name=WP_230428241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083598.1;locus_tag=LPH58_RS09400;product=YihY/virulence factor BrkB family protein;protein_id=WP_230428241.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2181344 2183077 . + . ID=gene-LPH58_RS09405;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LPH58_RS09405;old_locus_tag=LPH58_09405 NZ_CP087690.1 Protein Homology CDS 2181344 2183077 . + 0 ID=cds-WP_038270334.1;Parent=gene-LPH58_RS09405;Dbxref=Genbank:WP_038270334.1;Name=WP_038270334.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083599.1;locus_tag=LPH58_RS09405;product=DNA primase;protein_id=WP_038270334.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2183186 2183338 . - . ID=gene-LPH58_RS09410;Name=LPH58_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09410;old_locus_tag=LPH58_09410 NZ_CP087690.1 GeneMarkS-2+ CDS 2183186 2183338 . - 0 ID=cds-WP_160165119.1;Parent=gene-LPH58_RS09410;Dbxref=Genbank:WP_160165119.1;Name=WP_160165119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09410;product=hypothetical protein;protein_id=WP_160165119.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2183723 2185015 . - . ID=gene-LPH58_RS09415;Name=LPH58_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09415;old_locus_tag=LPH58_09415 NZ_CP087690.1 Protein Homology CDS 2183723 2185015 . - 0 ID=cds-WP_038270333.1;Parent=gene-LPH58_RS09415;Dbxref=Genbank:WP_038270333.1;Name=WP_038270333.1;Ontology_term=GO:0006436,GO:0004830;gbkey=CDS;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089825.1;locus_tag=LPH58_RS09415;product=tryptophan--tRNA ligase;protein_id=WP_038270333.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2185757 2187688 . - . ID=gene-LPH58_RS09420;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=LPH58_RS09420;old_locus_tag=LPH58_09420 NZ_CP087690.1 Protein Homology CDS 2185757 2187688 . - 0 ID=cds-WP_038270331.1;Parent=gene-LPH58_RS09420;Dbxref=Genbank:WP_038270331.1;Name=WP_038270331.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851823.1;locus_tag=LPH58_RS09420;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_038270331.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2187685 2191419 . - . ID=gene-LPH58_RS09425;Name=LPH58_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09425;old_locus_tag=LPH58_09425 NZ_CP087690.1 Protein Homology CDS 2187685 2191419 . - 0 ID=cds-WP_160199304.1;Parent=gene-LPH58_RS09425;Dbxref=Genbank:WP_160199304.1;Name=WP_160199304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083603.1;locus_tag=LPH58_RS09425;product=exodeoxyribonuclease V subunit beta;protein_id=WP_160199304.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2191416 2194766 . - . ID=gene-LPH58_RS09430;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LPH58_RS09430;old_locus_tag=LPH58_09430 NZ_CP087690.1 Protein Homology CDS 2191416 2194766 . - 0 ID=cds-WP_038270568.1;Parent=gene-LPH58_RS09430;Dbxref=Genbank:WP_038270568.1;Name=WP_038270568.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851826.1;locus_tag=LPH58_RS09430;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_038270568.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2195009 2195803 . + . ID=gene-LPH58_RS09435;Name=LPH58_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09435;old_locus_tag=LPH58_09435 NZ_CP087690.1 Protein Homology CDS 2195009 2195803 . + 0 ID=cds-WP_038270567.1;Parent=gene-LPH58_RS09435;Dbxref=Genbank:WP_038270567.1;Name=WP_038270567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089839.1;locus_tag=LPH58_RS09435;product=ABC transporter ATP-binding protein;protein_id=WP_038270567.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2195803 2196552 . + . ID=gene-LPH58_RS09440;Name=LPH58_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09440;old_locus_tag=LPH58_09440 NZ_CP087690.1 Protein Homology CDS 2195803 2196552 . + 0 ID=cds-WP_038270565.1;Parent=gene-LPH58_RS09440;Dbxref=Genbank:WP_038270565.1;Name=WP_038270565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019302478.1;locus_tag=LPH58_RS09440;product=MlaE family lipid ABC transporter permease subunit;protein_id=WP_038270565.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2196677 2197213 . + . ID=gene-LPH58_RS09445;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LPH58_RS09445;old_locus_tag=LPH58_09445 NZ_CP087690.1 Protein Homology CDS 2196677 2197213 . + 0 ID=cds-WP_038270564.1;Parent=gene-LPH58_RS09445;Dbxref=Genbank:WP_038270564.1;Name=WP_038270564.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851827.1;locus_tag=LPH58_RS09445;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_038270564.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2197210 2197866 . + . ID=gene-LPH58_RS09450;Name=LPH58_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09450;old_locus_tag=LPH58_09450 NZ_CP087690.1 Protein Homology CDS 2197210 2197866 . + 0 ID=cds-WP_038270563.1;Parent=gene-LPH58_RS09450;Dbxref=Genbank:WP_038270563.1;Name=WP_038270563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851828.1;locus_tag=LPH58_RS09450;product=phospholipid-binding protein MlaC;protein_id=WP_038270563.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2197856 2198158 . + . ID=gene-LPH58_RS09455;Name=LPH58_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09455;old_locus_tag=LPH58_09455 NZ_CP087690.1 Protein Homology CDS 2197856 2198158 . + 0 ID=cds-WP_038270562.1;Parent=gene-LPH58_RS09455;Dbxref=Genbank:WP_038270562.1;Name=WP_038270562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083609.1;locus_tag=LPH58_RS09455;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_038270562.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2198173 2199207 . + . ID=gene-LPH58_RS09460;Name=LPH58_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09460;old_locus_tag=LPH58_09460 NZ_CP087690.1 Protein Homology CDS 2198173 2199207 . + 0 ID=cds-WP_038270561.1;Parent=gene-LPH58_RS09460;Dbxref=Genbank:WP_038270561.1;Name=WP_038270561.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089845.1;locus_tag=LPH58_RS09460;product=VacJ family lipoprotein;protein_id=WP_038270561.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2199936 2201306 . - . ID=gene-LPH58_RS09465;Name=LPH58_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09465;old_locus_tag=LPH58_09465 NZ_CP087690.1 Protein Homology CDS 2199936 2201306 . - 0 ID=cds-WP_038270560.1;Parent=gene-LPH58_RS09465;Dbxref=Genbank:WP_038270560.1;Name=WP_038270560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851830.1;locus_tag=LPH58_RS09465;product=DNA recombination protein RmuC;protein_id=WP_038270560.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2201686 2202987 . - . ID=gene-LPH58_RS09470;Name=LPH58_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09470;old_locus_tag=LPH58_09470 NZ_CP087690.1 Protein Homology CDS 2201686 2202987 . - 0 ID=cds-WP_038270559.1;Parent=gene-LPH58_RS09470;Dbxref=Genbank:WP_038270559.1;Name=WP_038270559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892942.1;locus_tag=LPH58_RS09470;product=AAA-associated domain-containing protein;protein_id=WP_038270559.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2203019 2204776 . - . ID=gene-LPH58_RS09475;Name=LPH58_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09475;old_locus_tag=LPH58_09475 NZ_CP087690.1 Protein Homology CDS 2203019 2204776 . - 0 ID=cds-WP_038270558.1;Parent=gene-LPH58_RS09475;Dbxref=Genbank:WP_038270558.1;Name=WP_038270558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098200.1;locus_tag=LPH58_RS09475;product=ABC transporter permease subunit;protein_id=WP_038270558.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2204890 2205087 . + . ID=gene-LPH58_RS09480;Name=LPH58_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09480;old_locus_tag=LPH58_09480 NZ_CP087690.1 GeneMarkS-2+ CDS 2204890 2205087 . + 0 ID=cds-WP_160165136.1;Parent=gene-LPH58_RS09480;Dbxref=Genbank:WP_160165136.1;Name=WP_160165136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09480;product=hypothetical protein;protein_id=WP_160165136.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2205544 2206977 . + . ID=gene-LPH58_RS09485;Name=LPH58_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09485;old_locus_tag=LPH58_09485 NZ_CP087690.1 Protein Homology CDS 2205544 2206977 . + 0 ID=cds-WP_038270582.1;Parent=gene-LPH58_RS09485;Dbxref=Genbank:WP_038270582.1;Name=WP_038270582.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892938.1;locus_tag=LPH58_RS09485;product=amino acid permease;protein_id=WP_038270582.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2207047 2207241 . + . ID=gene-LPH58_RS09490;Name=LPH58_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09490;old_locus_tag=LPH58_09490 NZ_CP087690.1 GeneMarkS-2+ CDS 2207047 2207241 . + 0 ID=cds-WP_152536581.1;Parent=gene-LPH58_RS09490;Dbxref=Genbank:WP_152536581.1;Name=WP_152536581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09490;product=hypothetical protein;protein_id=WP_152536581.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2207210 2208379 . - . ID=gene-LPH58_RS09495;Name=LPH58_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09495;old_locus_tag=LPH58_09495 NZ_CP087690.1 Protein Homology CDS 2207210 2208379 . - 0 ID=cds-WP_038270556.1;Parent=gene-LPH58_RS09495;Dbxref=Genbank:WP_038270556.1;Name=WP_038270556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264547.1;locus_tag=LPH58_RS09495;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_038270556.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2208652 2209608 . + . ID=gene-LPH58_RS09500;Name=LPH58_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09500;old_locus_tag=LPH58_09500 NZ_CP087690.1 Protein Homology CDS 2208652 2209608 . + 0 ID=cds-WP_038270555.1;Parent=gene-LPH58_RS09500;Dbxref=Genbank:WP_038270555.1;Name=WP_038270555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006449013.1;locus_tag=LPH58_RS09500;product=TerC family protein;protein_id=WP_038270555.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2211138 2212225 . - . ID=gene-LPH58_RS09505;Name=LPH58_RS09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS09505;old_locus_tag=LPH58_09505;pseudo=true NZ_CP087690.1 Protein Homology CDS 2211138 2212225 . - 0 ID=cds-LPH58_RS09505;Parent=gene-LPH58_RS09505;Note=frameshifted%3B internal stop;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091577.1;locus_tag=LPH58_RS09505;product=glycerophosphodiester phosphodiesterase family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2212422 2214050 . - . ID=gene-LPH58_RS09510;Name=LPH58_RS09510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS09510;old_locus_tag=LPH58_09510;pseudo=true NZ_CP087690.1 Protein Homology CDS 2212422 2214050 . - 0 ID=cds-LPH58_RS09510;Parent=gene-LPH58_RS09510;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019463570.1;locus_tag=LPH58_RS09510;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2214672 2215058 . - . ID=gene-LPH58_RS09515;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LPH58_RS09515;old_locus_tag=LPH58_09515 NZ_CP087690.1 Protein Homology CDS 2214672 2215058 . - 0 ID=cds-WP_038270552.1;Parent=gene-LPH58_RS09515;Dbxref=Genbank:WP_038270552.1;Name=WP_038270552.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005411302.1;locus_tag=LPH58_RS09515;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_038270552.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2215092 2215526 . - . ID=gene-LPH58_RS09520;Name=LPH58_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09520;old_locus_tag=LPH58_09520 NZ_CP087690.1 Protein Homology CDS 2215092 2215526 . - 0 ID=cds-WP_038270551.1;Parent=gene-LPH58_RS09520;Dbxref=Genbank:WP_038270551.1;Name=WP_038270551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851837.1;locus_tag=LPH58_RS09520;product=polymer-forming cytoskeletal protein;protein_id=WP_038270551.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2215528 2216205 . - . ID=gene-LPH58_RS09525;Name=LPH58_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09525;old_locus_tag=LPH58_09525 NZ_CP087690.1 Protein Homology CDS 2215528 2216205 . - 0 ID=cds-WP_230428298.1;Parent=gene-LPH58_RS09525;Dbxref=Genbank:WP_230428298.1;Name=WP_230428298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607439.1;locus_tag=LPH58_RS09525;product=hypothetical protein;protein_id=WP_230428298.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2217195 2218853 . + . ID=gene-LPH58_RS09530;Name=LPH58_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09530;old_locus_tag=LPH58_09530 NZ_CP087690.1 Protein Homology CDS 2217195 2218853 . + 0 ID=cds-WP_051482267.1;Parent=gene-LPH58_RS09530;Dbxref=Genbank:WP_051482267.1;Name=WP_051482267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382723.1;locus_tag=LPH58_RS09530;product=EAL domain-containing response regulator;protein_id=WP_051482267.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2219156 2220103 . + . ID=gene-LPH58_RS09535;Name=LPH58_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09535;old_locus_tag=LPH58_09535 NZ_CP087690.1 Protein Homology CDS 2219156 2220103 . + 0 ID=cds-WP_230428508.1;Parent=gene-LPH58_RS09535;Dbxref=Genbank:WP_230428508.1;Name=WP_230428508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.2;locus_tag=LPH58_RS09535;product=ATP-binding protein;protein_id=WP_230428508.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2220163 2221182 . + . ID=gene-LPH58_RS09540;Name=LPH58_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09540;old_locus_tag=LPH58_09540 NZ_CP087690.1 Protein Homology CDS 2220163 2221182 . + 0 ID=cds-WP_230428243.1;Parent=gene-LPH58_RS09540;Dbxref=Genbank:WP_230428243.1;Name=WP_230428243.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.2;locus_tag=LPH58_RS09540;product=response regulator;protein_id=WP_230428243.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2221184 2221654 . - . ID=gene-LPH58_RS09545;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LPH58_RS09545;old_locus_tag=LPH58_09545 NZ_CP087690.1 Protein Homology CDS 2221184 2221654 . - 0 ID=cds-WP_038270549.1;Parent=gene-LPH58_RS09545;Dbxref=Genbank:WP_038270549.1;Name=WP_038270549.1;Ontology_term=GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002808230.1;locus_tag=LPH58_RS09545;product=bacterioferritin;protein_id=WP_038270549.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2221736 2221963 . - . ID=gene-LPH58_RS09550;Name=LPH58_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09550;old_locus_tag=LPH58_09550 NZ_CP087690.1 Protein Homology CDS 2221736 2221963 . - 0 ID=cds-WP_171898093.1;Parent=gene-LPH58_RS09550;Dbxref=Genbank:WP_171898093.1;Name=WP_171898093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892924.1;locus_tag=LPH58_RS09550;product=(2Fe-2S)-binding protein;protein_id=WP_171898093.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2222108 2222701 . - . ID=gene-LPH58_RS09555;Name=LPH58_RS09555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS09555;old_locus_tag=LPH58_09555;pseudo=true NZ_CP087690.1 Protein Homology CDS 2222108 2222701 . - 0 ID=cds-LPH58_RS09555;Parent=gene-LPH58_RS09555;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083624.1;locus_tag=LPH58_RS09555;product=RNA pyrophosphohydrolase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2222747 2222823 . + . ID=gene-LPH58_RS09560;Name=LPH58_RS09560;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS09560;old_locus_tag=LPH58_09560 NZ_CP087690.1 tRNAscan-SE tRNA 2222747 2222823 . + . ID=rna-LPH58_RS09560;Parent=gene-LPH58_RS09560;anticodon=(pos:2222781..2222783);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09560;product=tRNA-Met NZ_CP087690.1 tRNAscan-SE exon 2222747 2222823 . + . ID=exon-LPH58_RS09560-1;Parent=rna-LPH58_RS09560;anticodon=(pos:2222781..2222783);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09560;product=tRNA-Met NZ_CP087690.1 RefSeq gene 2222877 2222951 . + . ID=gene-LPH58_RS09565;Name=LPH58_RS09565;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS09565;old_locus_tag=LPH58_09565 NZ_CP087690.1 tRNAscan-SE tRNA 2222877 2222951 . + . ID=rna-LPH58_RS09565;Parent=gene-LPH58_RS09565;anticodon=(pos:2222909..2222911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09565;product=tRNA-Gln NZ_CP087690.1 tRNAscan-SE exon 2222877 2222951 . + . ID=exon-LPH58_RS09565-1;Parent=rna-LPH58_RS09565;anticodon=(pos:2222909..2222911);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09565;product=tRNA-Gln NZ_CP087690.1 RefSeq gene 2223490 2224701 . - . ID=gene-LPH58_RS09570;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LPH58_RS09570;old_locus_tag=LPH58_09570 NZ_CP087690.1 Protein Homology CDS 2223490 2224701 . - 0 ID=cds-WP_038270548.1;Parent=gene-LPH58_RS09570;Dbxref=Genbank:WP_038270548.1;Name=WP_038270548.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083625.1;locus_tag=LPH58_RS09570;product=methionine adenosyltransferase;protein_id=WP_038270548.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2227083 2227298 . - . ID=gene-LPH58_RS09575;Name=LPH58_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09575;old_locus_tag=LPH58_09575 NZ_CP087690.1 GeneMarkS-2+ CDS 2227083 2227298 . - 0 ID=cds-WP_038270546.1;Parent=gene-LPH58_RS09575;Dbxref=Genbank:WP_038270546.1;Name=WP_038270546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09575;product=hypothetical protein;protein_id=WP_038270546.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2228329 2229777 . - . ID=gene-LPH58_RS09580;Name=LPH58_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09580;old_locus_tag=LPH58_09580 NZ_CP087690.1 Protein Homology CDS 2228329 2229777 . - 0 ID=cds-WP_051482260.1;Parent=gene-LPH58_RS09580;Dbxref=Genbank:WP_051482260.1;Name=WP_051482260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852808.1;locus_tag=LPH58_RS09580;product=ATP-binding protein;protein_id=WP_051482260.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2229793 2230476 . - . ID=gene-LPH58_RS09585;Name=LPH58_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09585;old_locus_tag=LPH58_09585 NZ_CP087690.1 Protein Homology CDS 2229793 2230476 . - 0 ID=cds-WP_038270544.1;Parent=gene-LPH58_RS09585;Dbxref=Genbank:WP_038270544.1;Name=WP_038270544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017917079.1;locus_tag=LPH58_RS09585;product=response regulator transcription factor;protein_id=WP_038270544.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2230567 2230938 . - . ID=gene-LPH58_RS09590;Name=LPH58_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09590;old_locus_tag=LPH58_09590 NZ_CP087690.1 Protein Homology CDS 2230567 2230938 . - 0 ID=cds-WP_038270543.1;Parent=gene-LPH58_RS09590;Dbxref=Genbank:WP_038270543.1;Name=WP_038270543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083628.1;locus_tag=LPH58_RS09590;product=hypothetical protein;protein_id=WP_038270543.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2231157 2232167 . - . ID=gene-LPH58_RS09595;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LPH58_RS09595;old_locus_tag=LPH58_09595 NZ_CP087690.1 Protein Homology CDS 2231157 2232167 . - 0 ID=cds-WP_038270542.1;Parent=gene-LPH58_RS09595;Dbxref=Genbank:WP_038270542.1;Name=WP_038270542.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004083629.1;locus_tag=LPH58_RS09595;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_038270542.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2235480 2237525 . - . ID=gene-LPH58_RS09600;Name=LPH58_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09600;old_locus_tag=LPH58_09600 NZ_CP087690.1 Protein Homology CDS 2235480 2237525 . - 0 ID=cds-WP_038270540.1;Parent=gene-LPH58_RS09600;Dbxref=Genbank:WP_038270540.1;Name=WP_038270540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852444.1;locus_tag=LPH58_RS09600;product=TonB-dependent receptor;protein_id=WP_038270540.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2237682 2238092 . + . ID=gene-LPH58_RS09605;Name=LPH58_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09605;old_locus_tag=LPH58_09605 NZ_CP087690.1 Protein Homology CDS 2237682 2238092 . + 0 ID=cds-WP_038270578.1;Parent=gene-LPH58_RS09605;Dbxref=Genbank:WP_038270578.1;Name=WP_038270578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852104.1;locus_tag=LPH58_RS09605;product=MerC domain-containing protein;protein_id=WP_038270578.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2238228 2238410 . + . ID=gene-LPH58_RS09610;Name=LPH58_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09610;old_locus_tag=LPH58_09610 NZ_CP087690.1 Protein Homology CDS 2238228 2238410 . + 0 ID=cds-WP_081755402.1;Parent=gene-LPH58_RS09610;Dbxref=Genbank:WP_081755402.1;Name=WP_081755402.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487537.1;locus_tag=LPH58_RS09610;product=30S ribosomal protein THX;protein_id=WP_081755402.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2239212 2241797 . - . ID=gene-LPH58_RS09615;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LPH58_RS09615;old_locus_tag=LPH58_09615 NZ_CP087690.1 Protein Homology CDS 2239212 2241797 . - 0 ID=cds-WP_038270539.1;Parent=gene-LPH58_RS09615;Dbxref=Genbank:WP_038270539.1;Name=WP_038270539.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892912.1;locus_tag=LPH58_RS09615;product=ATP-dependent chaperone ClpB;protein_id=WP_038270539.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2242131 2242361 . + . ID=gene-LPH58_RS09620;Name=LPH58_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09620;old_locus_tag=LPH58_09620 NZ_CP087690.1 GeneMarkS-2+ CDS 2242131 2242361 . + 0 ID=cds-WP_152536580.1;Parent=gene-LPH58_RS09620;Dbxref=Genbank:WP_152536580.1;Name=WP_152536580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09620;product=hypothetical protein;protein_id=WP_152536580.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2242487 2242678 . - . ID=gene-LPH58_RS09625;Name=LPH58_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09625;old_locus_tag=LPH58_09625 NZ_CP087690.1 Protein Homology CDS 2242487 2242678 . - 0 ID=cds-WP_038270538.1;Parent=gene-LPH58_RS09625;Dbxref=Genbank:WP_038270538.1;Name=WP_038270538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338043.1;locus_tag=LPH58_RS09625;product=rubredoxin;protein_id=WP_038270538.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2242756 2243370 . + . ID=gene-LPH58_RS09630;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LPH58_RS09630;old_locus_tag=LPH58_09630 NZ_CP087690.1 Protein Homology CDS 2242756 2243370 . + 0 ID=cds-WP_038270537.1;Parent=gene-LPH58_RS09630;Dbxref=Genbank:WP_038270537.1;Name=WP_038270537.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852106.1;locus_tag=LPH58_RS09630;product=thiamine phosphate synthase;protein_id=WP_038270537.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2243405 2243545 . - . ID=gene-LPH58_RS09635;Name=LPH58_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09635;old_locus_tag=LPH58_09635 NZ_CP087690.1 GeneMarkS-2+ CDS 2243405 2243545 . - 0 ID=cds-WP_171898058.1;Parent=gene-LPH58_RS09635;Dbxref=Genbank:WP_171898058.1;Name=WP_171898058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09635;product=hypothetical protein;protein_id=WP_171898058.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2243916 2244077 . - . ID=gene-LPH58_RS09640;Name=LPH58_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09640;old_locus_tag=LPH58_09640 NZ_CP087690.1 GeneMarkS-2+ CDS 2243916 2244077 . - 0 ID=cds-WP_160165135.1;Parent=gene-LPH58_RS09640;Dbxref=Genbank:WP_160165135.1;Name=WP_160165135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09640;product=hypothetical protein;protein_id=WP_160165135.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2244862 2246091 . + . ID=gene-LPH58_RS09645;Name=LPH58_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09645;old_locus_tag=LPH58_09645 NZ_CP087690.1 Protein Homology CDS 2244862 2246091 . + 0 ID=cds-WP_038270535.1;Parent=gene-LPH58_RS09645;Dbxref=Genbank:WP_038270535.1;Name=WP_038270535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086591.1;locus_tag=LPH58_RS09645;product=cytochrome P450;protein_id=WP_038270535.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2247697 2248965 . + . ID=gene-LPH58_RS09650;Name=LPH58_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09650;old_locus_tag=LPH58_09650 NZ_CP087690.1 Protein Homology CDS 2247697 2248965 . + 0 ID=cds-WP_038270533.1;Parent=gene-LPH58_RS09650;Dbxref=Genbank:WP_038270533.1;Name=WP_038270533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089920.1;locus_tag=LPH58_RS09650;product=lipase;protein_id=WP_038270533.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2249706 2250950 . + . ID=gene-LPH58_RS09655;Name=LPH58_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09655;old_locus_tag=LPH58_09655 NZ_CP087690.1 Protein Homology CDS 2249706 2250950 . + 0 ID=cds-WP_114867225.1;Parent=gene-LPH58_RS09655;Dbxref=Genbank:WP_114867225.1;Name=WP_114867225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010892891.1;locus_tag=LPH58_RS09655;product=alpha/beta hydrolase;protein_id=WP_114867225.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2251999 2252259 . - . ID=gene-LPH58_RS09660;Name=LPH58_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09660;old_locus_tag=LPH58_09660 NZ_CP087690.1 GeneMarkS-2+ CDS 2251999 2252259 . - 0 ID=cds-WP_038270531.1;Parent=gene-LPH58_RS09660;Dbxref=Genbank:WP_038270531.1;Name=WP_038270531.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09660;product=hypothetical protein;protein_id=WP_038270531.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2252275 2252760 . - . ID=gene-LPH58_RS09665;Name=LPH58_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09665;old_locus_tag=LPH58_09665 NZ_CP087690.1 GeneMarkS-2+ CDS 2252275 2252760 . - 0 ID=cds-WP_038270530.1;Parent=gene-LPH58_RS09665;Dbxref=Genbank:WP_038270530.1;Name=WP_038270530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09665;product=hypothetical protein;protein_id=WP_038270530.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2253422 2253598 . + . ID=gene-LPH58_RS09670;Name=LPH58_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09670;old_locus_tag=LPH58_09670 NZ_CP087690.1 GeneMarkS-2+ CDS 2253422 2253598 . + 0 ID=cds-WP_160165133.1;Parent=gene-LPH58_RS09670;Dbxref=Genbank:WP_160165133.1;Name=WP_160165133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09670;product=hypothetical protein;protein_id=WP_160165133.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2254104 2255519 . + . ID=gene-LPH58_RS09675;Name=LPH58_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09675;old_locus_tag=LPH58_09675 NZ_CP087690.1 Protein Homology CDS 2254104 2255519 . + 0 ID=cds-WP_038270576.1;Parent=gene-LPH58_RS09675;Dbxref=Genbank:WP_038270576.1;Name=WP_038270576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086603.1;locus_tag=LPH58_RS09675;product=replicative DNA helicase;protein_id=WP_038270576.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2256047 2256769 . + . ID=gene-LPH58_RS09680;Name=LPH58_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09680;old_locus_tag=LPH58_09680 NZ_CP087690.1 Protein Homology CDS 2256047 2256769 . + 0 ID=cds-WP_051482259.1;Parent=gene-LPH58_RS09680;Dbxref=Genbank:WP_051482259.1;Name=WP_051482259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089919.1;locus_tag=LPH58_RS09680;product=OmpA family protein;protein_id=WP_051482259.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2259194 2260147 . - . ID=gene-LPH58_RS09685;Name=LPH58_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09685;old_locus_tag=LPH58_09685 NZ_CP087690.1 Protein Homology CDS 2259194 2260147 . - 0 ID=cds-WP_038270529.1;Parent=gene-LPH58_RS09685;Dbxref=Genbank:WP_038270529.1;Name=WP_038270529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089916.1;locus_tag=LPH58_RS09685;product=ribokinase;protein_id=WP_038270529.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2260678 2261649 . + . ID=gene-LPH58_RS09690;Name=LPH58_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09690;old_locus_tag=LPH58_09690 NZ_CP087690.1 Protein Homology CDS 2260678 2261649 . + 0 ID=cds-WP_038270528.1;Parent=gene-LPH58_RS09690;Dbxref=Genbank:WP_038270528.1;Name=WP_038270528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338044.1;locus_tag=LPH58_RS09690;product=aldo/keto reductase;protein_id=WP_038270528.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2263267 2265696 . - . ID=gene-LPH58_RS09695;Name=LPH58_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09695;old_locus_tag=LPH58_09695 NZ_CP087690.1 Protein Homology CDS 2263267 2265696 . - 0 ID=cds-WP_038270527.1;Parent=gene-LPH58_RS09695;Dbxref=Genbank:WP_038270527.1;Name=WP_038270527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812411.1;locus_tag=LPH58_RS09695;product=penicillin-binding protein 1A;protein_id=WP_038270527.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2265914 2266996 . + . ID=gene-LPH58_RS09700;Name=pilM;gbkey=Gene;gene=pilM;gene_biotype=protein_coding;locus_tag=LPH58_RS09700;old_locus_tag=LPH58_09700 NZ_CP087690.1 Protein Homology CDS 2265914 2266996 . + 0 ID=cds-WP_171898059.1;Parent=gene-LPH58_RS09700;Dbxref=Genbank:WP_171898059.1;Name=WP_171898059.1;Ontology_term=GO:0009297;gbkey=CDS;gene=pilM;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974443.1;locus_tag=LPH58_RS09700;product=type IV pilus assembly protein PilM;protein_id=WP_171898059.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2266996 2267673 . + . ID=gene-LPH58_RS09705;Name=LPH58_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09705;old_locus_tag=LPH58_09705 NZ_CP087690.1 Protein Homology CDS 2266996 2267673 . + 0 ID=cds-WP_038270525.1;Parent=gene-LPH58_RS09705;Dbxref=Genbank:WP_038270525.1;Name=WP_038270525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089910.1;locus_tag=LPH58_RS09705;product=PilN domain-containing protein;protein_id=WP_038270525.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2267673 2268341 . + . ID=gene-LPH58_RS09710;Name=LPH58_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09710;old_locus_tag=LPH58_09710 NZ_CP087690.1 Protein Homology CDS 2267673 2268341 . + 0 ID=cds-WP_038270524.1;Parent=gene-LPH58_RS09710;Dbxref=Genbank:WP_038270524.1;Name=WP_038270524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089909.1;locus_tag=LPH58_RS09710;product=type 4a pilus biogenesis protein PilO;protein_id=WP_038270524.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2268338 2268868 . + . ID=gene-LPH58_RS09715;Name=LPH58_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09715;old_locus_tag=LPH58_09715 NZ_CP087690.1 Protein Homology CDS 2268338 2268868 . + 0 ID=cds-WP_038270523.1;Parent=gene-LPH58_RS09715;Dbxref=Genbank:WP_038270523.1;Name=WP_038270523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086595.1;locus_tag=LPH58_RS09715;product=pilus assembly protein PilP;protein_id=WP_038270523.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2268892 2270760 . + . ID=gene-LPH58_RS09720;Name=LPH58_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09720;old_locus_tag=LPH58_09720 NZ_CP087690.1 Protein Homology CDS 2268892 2270760 . + 0 ID=cds-WP_171898060.1;Parent=gene-LPH58_RS09720;Dbxref=Genbank:WP_171898060.1;Name=WP_171898060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005911884.1;locus_tag=LPH58_RS09720;product=type IV pilus secretin PilQ family protein;protein_id=WP_171898060.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2271944 2272702 . + . ID=gene-LPH58_RS09725;Name=LPH58_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09725;old_locus_tag=LPH58_09725 NZ_CP087690.1 Protein Homology CDS 2271944 2272702 . + 0 ID=cds-WP_038270521.1;Parent=gene-LPH58_RS09725;Dbxref=Genbank:WP_038270521.1;Name=WP_038270521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852112.1;locus_tag=LPH58_RS09725;product=phosphatase PAP2 family protein;protein_id=WP_038270521.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2272738 2274354 . + . ID=gene-LPH58_RS09730;Name=LPH58_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09730;old_locus_tag=LPH58_09730 NZ_CP087690.1 Protein Homology CDS 2272738 2274354 . + 0 ID=cds-WP_051482258.1;Parent=gene-LPH58_RS09730;Dbxref=Genbank:WP_051482258.1;Name=WP_051482258.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013535821.1;locus_tag=LPH58_RS09730;product=phosphoethanolamine--lipid A transferase;protein_id=WP_051482258.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2275149 2276357 . - . ID=gene-LPH58_RS09735;Name=LPH58_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09735;old_locus_tag=LPH58_09735 NZ_CP087690.1 Protein Homology CDS 2275149 2276357 . - 0 ID=cds-WP_038270519.1;Parent=gene-LPH58_RS09735;Dbxref=Genbank:WP_038270519.1;Name=WP_038270519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086591.1;locus_tag=LPH58_RS09735;product=cytochrome P450;protein_id=WP_038270519.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2277456 2279612 . - . ID=gene-LPH58_RS09740;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LPH58_RS09740;old_locus_tag=LPH58_09740 NZ_CP087690.1 Protein Homology CDS 2277456 2279612 . - 0 ID=cds-WP_038270518.1;Parent=gene-LPH58_RS09740;Dbxref=Genbank:WP_038270518.1;Name=WP_038270518.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300815.1;locus_tag=LPH58_RS09740;product=ATP-dependent DNA helicase RecG;protein_id=WP_038270518.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2279620 2280003 . - . ID=gene-LPH58_RS09745;Name=LPH58_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09745;old_locus_tag=LPH58_09745 NZ_CP087690.1 Protein Homology CDS 2279620 2280003 . - 0 ID=cds-WP_038270517.1;Parent=gene-LPH58_RS09745;Dbxref=Genbank:WP_038270517.1;Name=WP_038270517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486159.1;locus_tag=LPH58_RS09745;product=RidA family protein;protein_id=WP_038270517.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2280285 2282456 . - . ID=gene-LPH58_RS09750;Name=LPH58_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09750;old_locus_tag=LPH58_09750 NZ_CP087690.1 Protein Homology CDS 2280285 2282456 . - 0 ID=cds-WP_038270516.1;Parent=gene-LPH58_RS09750;Dbxref=Genbank:WP_038270516.1;Name=WP_038270516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011269543.1;locus_tag=LPH58_RS09750;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_038270516.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2283448 2283633 . + . ID=gene-LPH58_RS09755;Name=LPH58_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09755;old_locus_tag=LPH58_09755 NZ_CP087690.1 GeneMarkS-2+ CDS 2283448 2283633 . + 0 ID=cds-WP_038270515.1;Parent=gene-LPH58_RS09755;Dbxref=Genbank:WP_038270515.1;Name=WP_038270515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09755;product=hypothetical protein;protein_id=WP_038270515.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2284830 2286215 . + . ID=gene-LPH58_RS09760;Name=LPH58_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09760;old_locus_tag=LPH58_09760 NZ_CP087690.1 Protein Homology CDS 2284830 2286215 . + 0 ID=cds-WP_038270513.1;Parent=gene-LPH58_RS09760;Dbxref=Genbank:WP_038270513.1;Name=WP_038270513.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003466154.1;locus_tag=LPH58_RS09760;product=FAD-binding protein;protein_id=WP_038270513.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2289637 2290761 . + . ID=gene-LPH58_RS09765;Name=LPH58_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09765;old_locus_tag=LPH58_09765 NZ_CP087690.1 Protein Homology CDS 2289637 2290761 . + 0 ID=cds-WP_038270511.1;Parent=gene-LPH58_RS09765;Dbxref=Genbank:WP_038270511.1;Name=WP_038270511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017171142.1;locus_tag=LPH58_RS09765;product=OmpA family protein;protein_id=WP_038270511.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2292237 2292761 . + . ID=gene-LPH58_RS09770;Name=LPH58_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09770;old_locus_tag=LPH58_09770 NZ_CP087690.1 Protein Homology CDS 2292237 2292761 . + 0 ID=cds-WP_038270510.1;Parent=gene-LPH58_RS09770;Dbxref=Genbank:WP_038270510.1;Name=WP_038270510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851646.1;locus_tag=LPH58_RS09770;product=disulfide bond formation protein B;protein_id=WP_038270510.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2293579 2296365 . - . ID=gene-LPH58_RS09775;Name=LPH58_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09775;old_locus_tag=LPH58_09775 NZ_CP087690.1 Protein Homology CDS 2293579 2296365 . - 0 ID=cds-WP_038270509.1;Parent=gene-LPH58_RS09775;Dbxref=Genbank:WP_038270509.1;Name=WP_038270509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089937.1;locus_tag=LPH58_RS09775;product=TonB-dependent receptor;protein_id=WP_038270509.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2296596 2297069 . + . ID=gene-LPH58_RS09780;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LPH58_RS09780;old_locus_tag=LPH58_09780 NZ_CP087690.1 Protein Homology CDS 2296596 2297069 . + 0 ID=cds-WP_038270508.1;Parent=gene-LPH58_RS09780;Dbxref=Genbank:WP_038270508.1;Name=WP_038270508.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086621.1;locus_tag=LPH58_RS09780;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_038270508.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2297787 2297999 . - . ID=gene-LPH58_RS09785;Name=LPH58_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09785;old_locus_tag=LPH58_09785 NZ_CP087690.1 GeneMarkS-2+ CDS 2297787 2297999 . - 0 ID=cds-WP_038270507.1;Parent=gene-LPH58_RS09785;Dbxref=Genbank:WP_038270507.1;Name=WP_038270507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09785;product=hypothetical protein;protein_id=WP_038270507.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2298878 2298952 . - . ID=gene-LPH58_RS09790;Name=LPH58_RS09790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS09790;old_locus_tag=LPH58_09790 NZ_CP087690.1 tRNAscan-SE tRNA 2298878 2298952 . - . ID=rna-LPH58_RS09790;Parent=gene-LPH58_RS09790;anticodon=(pos:complement(2298918..2298920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09790;product=tRNA-Val NZ_CP087690.1 tRNAscan-SE exon 2298878 2298952 . - . ID=exon-LPH58_RS09790-1;Parent=rna-LPH58_RS09790;anticodon=(pos:complement(2298918..2298920));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS09790;product=tRNA-Val NZ_CP087690.1 RefSeq gene 2299062 2301074 . - . ID=gene-LPH58_RS09795;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LPH58_RS09795;old_locus_tag=LPH58_09795 NZ_CP087690.1 Protein Homology CDS 2299062 2301074 . - 0 ID=cds-WP_038270506.1;Parent=gene-LPH58_RS09795;Dbxref=Genbank:WP_038270506.1;Name=WP_038270506.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010342098.1;locus_tag=LPH58_RS09795;product=excinuclease ABC subunit UvrB;protein_id=WP_038270506.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2301229 2301774 . + . ID=gene-LPH58_RS09800;Name=LPH58_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09800;old_locus_tag=LPH58_09800 NZ_CP087690.1 Protein Homology CDS 2301229 2301774 . + 0 ID=cds-WP_038270574.1;Parent=gene-LPH58_RS09800;Dbxref=Genbank:WP_038270574.1;Name=WP_038270574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098232.1;locus_tag=LPH58_RS09800;product=Tfp pilus assembly protein FimT/FimU;protein_id=WP_038270574.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2302481 2302987 . - . ID=gene-LPH58_RS09805;Name=LPH58_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09805;old_locus_tag=LPH58_09805 NZ_CP087690.1 Protein Homology CDS 2302481 2302987 . - 0 ID=cds-WP_038270505.1;Parent=gene-LPH58_RS09805;Dbxref=Genbank:WP_038270505.1;Name=WP_038270505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089696.1;locus_tag=LPH58_RS09805;product=hypothetical protein;protein_id=WP_038270505.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2303007 2303915 . - . ID=gene-LPH58_RS09810;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LPH58_RS09810;old_locus_tag=LPH58_09810 NZ_CP087690.1 Protein Homology CDS 2303007 2303915 . - 0 ID=cds-WP_038270504.1;Parent=gene-LPH58_RS09810;Dbxref=Genbank:WP_038270504.1;Name=WP_038270504.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089694.1;locus_tag=LPH58_RS09810;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_038270504.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2304017 2304643 . + . ID=gene-LPH58_RS09815;Name=LPH58_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09815;old_locus_tag=LPH58_09815 NZ_CP087690.1 Protein Homology CDS 2304017 2304643 . + 0 ID=cds-WP_114867181.1;Parent=gene-LPH58_RS09815;Dbxref=Genbank:WP_114867181.1;Name=WP_114867181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503111.1;locus_tag=LPH58_RS09815;product=glycine cleavage system protein R;protein_id=WP_114867181.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2304691 2305170 . + . ID=gene-LPH58_RS09820;Name=LPH58_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09820;old_locus_tag=LPH58_09820 NZ_CP087690.1 Protein Homology CDS 2304691 2305170 . + 0 ID=cds-WP_038270503.1;Parent=gene-LPH58_RS09820;Dbxref=Genbank:WP_038270503.1;Name=WP_038270503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851611.1;locus_tag=LPH58_RS09820;product=peroxiredoxin;protein_id=WP_038270503.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2305248 2306648 . + . ID=gene-LPH58_RS09825;Name=LPH58_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09825;old_locus_tag=LPH58_09825 NZ_CP087690.1 Protein Homology CDS 2305248 2306648 . + 0 ID=cds-WP_038270502.1;Parent=gene-LPH58_RS09825;Dbxref=Genbank:WP_038270502.1;Name=WP_038270502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010365742.1;locus_tag=LPH58_RS09825;product=PhoH family protein;protein_id=WP_038270502.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2307502 2307774 . - . ID=gene-LPH58_RS09830;Name=LPH58_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09830;old_locus_tag=LPH58_09830 NZ_CP087690.1 GeneMarkS-2+ CDS 2307502 2307774 . - 0 ID=cds-WP_038270501.1;Parent=gene-LPH58_RS09830;Dbxref=Genbank:WP_038270501.1;Name=WP_038270501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09830;product=hypothetical protein;protein_id=WP_038270501.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2308294 2308425 . - . ID=gene-LPH58_RS12015;Name=LPH58_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12015 NZ_CP087690.1 GeneMarkS-2+ CDS 2308294 2308425 . - 0 ID=cds-WP_267903159.1;Parent=gene-LPH58_RS12015;Dbxref=Genbank:WP_267903159.1;Name=WP_267903159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12015;product=hypothetical protein;protein_id=WP_267903159.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2308448 2308636 . + . ID=gene-LPH58_RS09835;Name=LPH58_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09835;old_locus_tag=LPH58_09835 NZ_CP087690.1 GeneMarkS-2+ CDS 2308448 2308636 . + 0 ID=cds-WP_171898061.1;Parent=gene-LPH58_RS09835;Dbxref=Genbank:WP_171898061.1;Name=WP_171898061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09835;product=hypothetical protein;protein_id=WP_171898061.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2308627 2308920 . - . ID=gene-LPH58_RS09840;Name=LPH58_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09840;old_locus_tag=LPH58_09840 NZ_CP087690.1 Protein Homology CDS 2308627 2308920 . - 0 ID=cds-WP_038270572.1;Parent=gene-LPH58_RS09840;Dbxref=Genbank:WP_038270572.1;Name=WP_038270572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089684.1;locus_tag=LPH58_RS09840;product=hypothetical protein;protein_id=WP_038270572.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2310432 2311406 . - . ID=gene-LPH58_RS09845;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LPH58_RS09845;old_locus_tag=LPH58_09845 NZ_CP087690.1 Protein Homology CDS 2310432 2311406 . - 0 ID=cds-WP_038270498.1;Parent=gene-LPH58_RS09845;Dbxref=Genbank:WP_038270498.1;Name=WP_038270498.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851606.1;locus_tag=LPH58_RS09845;product=thiamine-phosphate kinase;protein_id=WP_038270498.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2311490 2311960 . - . ID=gene-LPH58_RS09850;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LPH58_RS09850;old_locus_tag=LPH58_09850 NZ_CP087690.1 Protein Homology CDS 2311490 2311960 . - 0 ID=cds-WP_038270497.1;Parent=gene-LPH58_RS09850;Dbxref=Genbank:WP_038270497.1;Name=WP_038270497.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893474.1;locus_tag=LPH58_RS09850;product=transcription antitermination factor NusB;protein_id=WP_038270497.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2311957 2312421 . - . ID=gene-LPH58_RS09855;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LPH58_RS09855;old_locus_tag=LPH58_09855 NZ_CP087690.1 Protein Homology CDS 2311957 2312421 . - 0 ID=cds-WP_038270496.1;Parent=gene-LPH58_RS09855;Dbxref=Genbank:WP_038270496.1;Name=WP_038270496.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011409394.1;locus_tag=LPH58_RS09855;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_038270496.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2312452 2313585 . - . ID=gene-LPH58_RS09860;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LPH58_RS09860;old_locus_tag=LPH58_09860 NZ_CP087690.1 Protein Homology CDS 2312452 2313585 . - 0 ID=cds-WP_038270495.1;Parent=gene-LPH58_RS09860;Dbxref=Genbank:WP_038270495.1;Name=WP_038270495.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851604.1;locus_tag=LPH58_RS09860;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_038270495.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2313585 2314184 . - . ID=gene-LPH58_RS09865;Name=LPH58_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09865;old_locus_tag=LPH58_09865 NZ_CP087690.1 Protein Homology CDS 2313585 2314184 . - 0 ID=cds-WP_038270494.1;Parent=gene-LPH58_RS09865;Dbxref=Genbank:WP_038270494.1;Name=WP_038270494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008576782.1;locus_tag=LPH58_RS09865;product=riboflavin synthase;protein_id=WP_038270494.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2314871 2315965 . - . ID=gene-LPH58_RS09870;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LPH58_RS09870;old_locus_tag=LPH58_09870 NZ_CP087690.1 Protein Homology CDS 2314871 2315965 . - 0 ID=cds-WP_038270493.1;Parent=gene-LPH58_RS09870;Dbxref=Genbank:WP_038270493.1;Name=WP_038270493.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893469.1;locus_tag=LPH58_RS09870;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_038270493.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2315978 2316256 . - . ID=gene-LPH58_RS09875;Name=LPH58_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09875;old_locus_tag=LPH58_09875 NZ_CP087690.1 GeneMarkS-2+ CDS 2315978 2316256 . - 0 ID=cds-WP_038270492.1;Parent=gene-LPH58_RS09875;Dbxref=Genbank:WP_038270492.1;Name=WP_038270492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS09875;product=hypothetical protein;protein_id=WP_038270492.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2316365 2316910 . - . ID=gene-LPH58_RS09880;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LPH58_RS09880;old_locus_tag=LPH58_09880 NZ_CP087690.1 Protein Homology CDS 2316365 2316910 . - 0 ID=cds-WP_038270491.1;Parent=gene-LPH58_RS09880;Dbxref=Genbank:WP_038270491.1;Name=WP_038270491.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086418.1;locus_tag=LPH58_RS09880;product=transcriptional regulator NrdR;protein_id=WP_038270491.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2316928 2317434 . - . ID=gene-LPH58_RS09885;Name=LPH58_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09885;old_locus_tag=LPH58_09885 NZ_CP087690.1 Protein Homology CDS 2316928 2317434 . - 0 ID=cds-WP_038270490.1;Parent=gene-LPH58_RS09885;Dbxref=Genbank:WP_038270490.1;Name=WP_038270490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893466.1;locus_tag=LPH58_RS09885;product=hypothetical protein;protein_id=WP_038270490.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2317518 2318771 . - . ID=gene-LPH58_RS09890;Name=LPH58_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09890;old_locus_tag=LPH58_09890 NZ_CP087690.1 Protein Homology CDS 2317518 2318771 . - 0 ID=cds-WP_038270489.1;Parent=gene-LPH58_RS09890;Dbxref=Genbank:WP_038270489.1;Name=WP_038270489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382734.1;locus_tag=LPH58_RS09890;product=serine hydroxymethyltransferase;protein_id=WP_038270489.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2319292 2320956 . + . ID=gene-LPH58_RS09895;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LPH58_RS09895;old_locus_tag=LPH58_09895 NZ_CP087690.1 Protein Homology CDS 2319292 2320956 . + 0 ID=cds-WP_038270488.1;Parent=gene-LPH58_RS09895;Dbxref=Genbank:WP_038270488.1;Name=WP_038270488.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398294.1;locus_tag=LPH58_RS09895;product=energy-dependent translational throttle protein EttA;protein_id=WP_038270488.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2321729 2323417 . + . ID=gene-LPH58_RS09900;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LPH58_RS09900;old_locus_tag=LPH58_09900 NZ_CP087690.1 Protein Homology CDS 2321729 2323417 . + 0 ID=cds-WP_038270487.1;Parent=gene-LPH58_RS09900;Dbxref=Genbank:WP_038270487.1;Name=WP_038270487.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851597.1;locus_tag=LPH58_RS09900;product=malate dehydrogenase (quinone);protein_id=WP_038270487.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2323597 2324022 . - . ID=gene-LPH58_RS09905;Name=LPH58_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09905;old_locus_tag=LPH58_09905 NZ_CP087690.1 Protein Homology CDS 2323597 2324022 . - 0 ID=cds-WP_038270486.1;Parent=gene-LPH58_RS09905;Dbxref=Genbank:WP_038270486.1;Name=WP_038270486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086425.1;locus_tag=LPH58_RS09905;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_038270486.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2324511 2325293 . - . ID=gene-LPH58_RS09910;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LPH58_RS09910;old_locus_tag=LPH58_09910 NZ_CP087690.1 Protein Homology CDS 2324511 2325293 . - 0 ID=cds-WP_038270485.1;Parent=gene-LPH58_RS09910;Dbxref=Genbank:WP_038270485.1;Name=WP_038270485.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851595.1;locus_tag=LPH58_RS09910;product=peptidoglycan editing factor PgeF;protein_id=WP_038270485.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2325301 2326278 . - . ID=gene-LPH58_RS09915;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=LPH58_RS09915;old_locus_tag=LPH58_09915 NZ_CP087690.1 Protein Homology CDS 2325301 2326278 . - 0 ID=cds-WP_038270484.1;Parent=gene-LPH58_RS09915;Dbxref=Genbank:WP_038270484.1;Name=WP_038270484.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089658.1;locus_tag=LPH58_RS09915;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_038270484.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2326393 2327271 . + . ID=gene-LPH58_RS09920;Name=LPH58_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09920;old_locus_tag=LPH58_09920 NZ_CP087690.1 Protein Homology CDS 2326393 2327271 . + 0 ID=cds-WP_038270483.1;Parent=gene-LPH58_RS09920;Dbxref=Genbank:WP_038270483.1;Name=WP_038270483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089657.1;locus_tag=LPH58_RS09920;product=outer membrane protein assembly factor BamD;protein_id=WP_038270483.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2328404 2328652 . - . ID=gene-LPH58_RS09925;Name=LPH58_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09925;old_locus_tag=LPH58_09925 NZ_CP087690.1 Protein Homology CDS 2328404 2328652 . - 0 ID=cds-WP_038270481.1;Parent=gene-LPH58_RS09925;Dbxref=Genbank:WP_038270481.1;Name=WP_038270481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086434.1;locus_tag=LPH58_RS09925;product=hypothetical protein;protein_id=WP_038270481.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2328656 2330506 . - . ID=gene-LPH58_RS09930;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=LPH58_RS09930;old_locus_tag=LPH58_09930 NZ_CP087690.1 Protein Homology CDS 2328656 2330506 . - 0 ID=cds-WP_038270480.1;Parent=gene-LPH58_RS09930;Dbxref=Genbank:WP_038270480.1;Name=WP_038270480.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851591.1;locus_tag=LPH58_RS09930;product=ferrous iron transport protein B;protein_id=WP_038270480.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2330503 2330751 . - . ID=gene-LPH58_RS09935;Name=LPH58_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09935;old_locus_tag=LPH58_09935 NZ_CP087690.1 Protein Homology CDS 2330503 2330751 . - 0 ID=cds-WP_038270479.1;Parent=gene-LPH58_RS09935;Dbxref=Genbank:WP_038270479.1;Name=WP_038270479.1;Ontology_term=GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893451.1;locus_tag=LPH58_RS09935;product=FeoA domain-containing protein;protein_id=WP_038270479.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2332912 2333688 . - . ID=gene-LPH58_RS09940;Name=LPH58_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09940;old_locus_tag=LPH58_09940 NZ_CP087690.1 Protein Homology CDS 2332912 2333688 . - 0 ID=cds-WP_038270571.1;Parent=gene-LPH58_RS09940;Dbxref=Genbank:WP_038270571.1;Name=WP_038270571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903673.1;locus_tag=LPH58_RS09940;product=SDR family oxidoreductase;protein_id=WP_038270571.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2335117 2335551 . - . ID=gene-LPH58_RS09945;Name=LPH58_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09945;old_locus_tag=LPH58_09945 NZ_CP087690.1 Protein Homology CDS 2335117 2335551 . - 0 ID=cds-WP_038270476.1;Parent=gene-LPH58_RS09945;Dbxref=Genbank:WP_038270476.1;Name=WP_038270476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016901612.1;locus_tag=LPH58_RS09945;product=ClpXP protease specificity-enhancing factor;protein_id=WP_038270476.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2335588 2336223 . - . ID=gene-LPH58_RS09950;Name=LPH58_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09950;old_locus_tag=LPH58_09950 NZ_CP087690.1 Protein Homology CDS 2335588 2336223 . - 0 ID=cds-WP_038270475.1;Parent=gene-LPH58_RS09950;Dbxref=Genbank:WP_038270475.1;Name=WP_038270475.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004152019.1;locus_tag=LPH58_RS09950;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_038270475.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2336380 2337104 . - . ID=gene-LPH58_RS09955;Name=LPH58_RS09955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS09955;old_locus_tag=LPH58_09955;pseudo=true NZ_CP087690.1 Protein Homology CDS 2336380 2337104 . - 0 ID=cds-LPH58_RS09955;Parent=gene-LPH58_RS09955;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098246.1;locus_tag=LPH58_RS09955;product=cytochrome c1;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2337097 2338355 . - . ID=gene-LPH58_RS09960;Name=LPH58_RS09960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS09960;old_locus_tag=LPH58_09960;pseudo=true NZ_CP087690.1 Protein Homology CDS 2337097 2338355 . - 0 ID=cds-LPH58_RS09960;Parent=gene-LPH58_RS09960;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007965674.1;locus_tag=LPH58_RS09960;product=cytochrome bc complex cytochrome b subunit;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2338386 2338946 . - . ID=gene-LPH58_RS09965;Name=petA;gbkey=Gene;gene=petA;gene_biotype=pseudogene;locus_tag=LPH58_RS09965;old_locus_tag=LPH58_09965;partial=true;pseudo=true;start_range=.,2338386 NZ_CP087690.1 Protein Homology CDS 2338386 2338946 . - 0 ID=cds-LPH58_RS09965;Parent=gene-LPH58_RS09965;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010382428.1;locus_tag=LPH58_RS09965;partial=true;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;pseudo=true;start_range=.,2338386;transl_table=11 NZ_CP087690.1 RefSeq gene 2339127 2340035 . - . ID=gene-LPH58_RS09970;Name=LPH58_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09970;old_locus_tag=LPH58_09970 NZ_CP087690.1 Protein Homology CDS 2339127 2340035 . - 0 ID=cds-WP_038270474.1;Parent=gene-LPH58_RS09970;Dbxref=Genbank:WP_038270474.1;Name=WP_038270474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089613.1;locus_tag=LPH58_RS09970;product=lytic transglycosylase domain-containing protein;protein_id=WP_038270474.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2340204 2341697 . + . ID=gene-LPH58_RS09975;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LPH58_RS09975;old_locus_tag=LPH58_09975 NZ_CP087690.1 Protein Homology CDS 2340204 2341697 . + 0 ID=cds-WP_038270473.1;Parent=gene-LPH58_RS09975;Dbxref=Genbank:WP_038270473.1;Name=WP_038270473.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851569.1;locus_tag=LPH58_RS09975;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_038270473.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2342041 2343024 . + . ID=gene-LPH58_RS09980;Name=LPH58_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09980;old_locus_tag=LPH58_09980 NZ_CP087690.1 Protein Homology CDS 2342041 2343024 . + 0 ID=cds-WP_038270472.1;Parent=gene-LPH58_RS09980;Dbxref=Genbank:WP_038270472.1;Name=WP_038270472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851568.1;locus_tag=LPH58_RS09980;product=PhoH family protein;protein_id=WP_038270472.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2343095 2343577 . + . ID=gene-LPH58_RS09985;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LPH58_RS09985;old_locus_tag=LPH58_09985 NZ_CP087690.1 Protein Homology CDS 2343095 2343577 . + 0 ID=cds-WP_038270471.1;Parent=gene-LPH58_RS09985;Dbxref=Genbank:WP_038270471.1;Name=WP_038270471.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571323.1;locus_tag=LPH58_RS09985;product=rRNA maturation RNase YbeY;protein_id=WP_038270471.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2343577 2344092 . + . ID=gene-LPH58_RS09990;Name=LPH58_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09990;old_locus_tag=LPH58_09990 NZ_CP087690.1 Protein Homology CDS 2343577 2344092 . + 0 ID=cds-WP_038270470.1;Parent=gene-LPH58_RS09990;Dbxref=Genbank:WP_038270470.1;Name=WP_038270470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851567.1;locus_tag=LPH58_RS09990;product=hypothetical protein;protein_id=WP_038270470.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2344191 2345072 . + . ID=gene-LPH58_RS09995;Name=LPH58_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS09995;old_locus_tag=LPH58_09995 NZ_CP087690.1 Protein Homology CDS 2344191 2345072 . + 0 ID=cds-WP_038270469.1;Parent=gene-LPH58_RS09995;Dbxref=Genbank:WP_038270469.1;Name=WP_038270469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003488337.1;locus_tag=LPH58_RS09995;product=HlyC/CorC family transporter;protein_id=WP_038270469.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2345123 2346295 . + . ID=gene-LPH58_RS10000;Name=LPH58_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10000;old_locus_tag=LPH58_10000 NZ_CP087690.1 Protein Homology CDS 2345123 2346295 . + 0 ID=cds-WP_230428299.1;Parent=gene-LPH58_RS10000;Dbxref=Genbank:WP_230428299.1;Name=WP_230428299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851565.1;locus_tag=LPH58_RS10000;product=DUF4105 domain-containing protein;protein_id=WP_230428299.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2346292 2347305 . + . ID=gene-LPH58_RS10005;Name=LPH58_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10005;old_locus_tag=LPH58_10005 NZ_CP087690.1 Protein Homology CDS 2346292 2347305 . + 0 ID=cds-WP_038270467.1;Parent=gene-LPH58_RS10005;Dbxref=Genbank:WP_038270467.1;Name=WP_038270467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893420.1;locus_tag=LPH58_RS10005;product=magnesium and cobalt transport protein CorA;protein_id=WP_038270467.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2347766 2348278 . + . ID=gene-LPH58_RS10010;Name=LPH58_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10010;old_locus_tag=LPH58_10010 NZ_CP087690.1 GeneMarkS-2+ CDS 2347766 2348278 . + 0 ID=cds-WP_230428245.1;Parent=gene-LPH58_RS10010;Dbxref=Genbank:WP_230428245.1;Name=WP_230428245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10010;product=hypothetical protein;protein_id=WP_230428245.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2348664 2349482 . - . ID=gene-LPH58_RS10015;Name=LPH58_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10015;old_locus_tag=LPH58_10015 NZ_CP087690.1 Protein Homology CDS 2348664 2349482 . - 0 ID=cds-WP_038270465.1;Parent=gene-LPH58_RS10015;Dbxref=Genbank:WP_038270465.1;Name=WP_038270465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098252.1;locus_tag=LPH58_RS10015;product=DUF769 domain-containing protein;protein_id=WP_038270465.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2349491 2350309 . - . ID=gene-LPH58_RS10020;Name=LPH58_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10020;old_locus_tag=LPH58_10020 NZ_CP087690.1 Protein Homology CDS 2349491 2350309 . - 0 ID=cds-WP_038270464.1;Parent=gene-LPH58_RS10020;Dbxref=Genbank:WP_038270464.1;Name=WP_038270464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089585.1;locus_tag=LPH58_RS10020;product=DUF769 domain-containing protein;protein_id=WP_038270464.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2350315 2358903 . - . ID=gene-LPH58_RS10025;Name=LPH58_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10025;old_locus_tag=LPH58_10025 NZ_CP087690.1 Protein Homology CDS 2350315 2358903 . - 0 ID=cds-WP_171898062.1;Parent=gene-LPH58_RS10025;Dbxref=Genbank:WP_171898062.1;Name=WP_171898062.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LPH58_RS10025;product=hemagglutinin repeat-containing protein;protein_id=WP_171898062.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2358863 2360233 . - . ID=gene-LPH58_RS10030;Name=LPH58_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10030;old_locus_tag=LPH58_10030 NZ_CP087690.1 Protein Homology CDS 2358863 2360233 . - 0 ID=cds-WP_171898063.1;Parent=gene-LPH58_RS10030;Dbxref=Genbank:WP_171898063.1;Name=WP_171898063.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LPH58_RS10030;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_171898063.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2360257 2361999 . - . ID=gene-LPH58_RS10035;Name=LPH58_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10035;old_locus_tag=LPH58_10035 NZ_CP087690.1 Protein Homology CDS 2360257 2361999 . - 0 ID=cds-WP_038272757.1;Parent=gene-LPH58_RS10035;Dbxref=Genbank:WP_038272757.1;Name=WP_038272757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382766.1;locus_tag=LPH58_RS10035;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_038272757.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2362933 2365395 . - . ID=gene-LPH58_RS10040;Name=LPH58_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10040;old_locus_tag=LPH58_10040 NZ_CP087690.1 Protein Homology CDS 2362933 2365395 . - 0 ID=cds-WP_051482380.1;Parent=gene-LPH58_RS10040;Dbxref=Genbank:WP_051482380.1;Name=WP_051482380.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017116881.1;locus_tag=LPH58_RS10040;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_051482380.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2365643 2368363 . - . ID=gene-LPH58_RS10045;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LPH58_RS10045;old_locus_tag=LPH58_10045 NZ_CP087690.1 Protein Homology CDS 2365643 2368363 . - 0 ID=cds-WP_038272755.1;Parent=gene-LPH58_RS10045;Dbxref=Genbank:WP_038272755.1;Name=WP_038272755.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851247.1;locus_tag=LPH58_RS10045;product=DNA gyrase subunit A;protein_id=WP_038272755.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2368564 2369628 . - . ID=gene-LPH58_RS10050;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=LPH58_RS10050;old_locus_tag=LPH58_10050 NZ_CP087690.1 Protein Homology CDS 2368564 2369628 . - 0 ID=cds-WP_038272761.1;Parent=gene-LPH58_RS10050;Dbxref=Genbank:WP_038272761.1;Name=WP_038272761.1;Ontology_term=GO:0019509,GO:0046523;gbkey=CDS;gene=mtnA;go_function=S-methyl-5-thioribose-1-phosphate isomerase activity|0046523||IEA;go_process=L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011051043.1;locus_tag=LPH58_RS10050;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=WP_038272761.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2369773 2370453 . - . ID=gene-LPH58_RS10055;Name=LPH58_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10055;old_locus_tag=LPH58_10055 NZ_CP087690.1 Protein Homology CDS 2369773 2370453 . - 0 ID=cds-WP_069636222.1;Parent=gene-LPH58_RS10055;Dbxref=Genbank:WP_069636222.1;Name=WP_069636222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894975.1;locus_tag=LPH58_RS10055;product=DUF3011 domain-containing protein;protein_id=WP_069636222.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2370654 2371604 . - . ID=gene-LPH58_RS10060;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=LPH58_RS10060;old_locus_tag=LPH58_10060 NZ_CP087690.1 Protein Homology CDS 2370654 2371604 . - 0 ID=cds-WP_114867184.1;Parent=gene-LPH58_RS10060;Dbxref=Genbank:WP_114867184.1;Name=WP_114867184.1;Ontology_term=GO:0006430,GO:0000166,GO:0004824,GO:0005524;gbkey=CDS;gene=epmA;go_function=nucleotide binding|0000166||IEA,lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084622.1;locus_tag=LPH58_RS10060;product=EF-P lysine aminoacylase EpmA;protein_id=WP_114867184.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2371601 2372074 . - . ID=gene-LPH58_RS10065;Name=LPH58_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10065;old_locus_tag=LPH58_10065 NZ_CP087690.1 Protein Homology CDS 2371601 2372074 . - 0 ID=cds-WP_038272751.1;Parent=gene-LPH58_RS10065;Dbxref=Genbank:WP_038272751.1;Name=WP_038272751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338106.1;locus_tag=LPH58_RS10065;product=GNAT family N-acetyltransferase;protein_id=WP_038272751.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2372085 2374580 . - . ID=gene-LPH58_RS10070;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LPH58_RS10070;old_locus_tag=LPH58_10070 NZ_CP087690.1 Protein Homology CDS 2372085 2374580 . - 0 ID=cds-WP_038272750.1;Parent=gene-LPH58_RS10070;Dbxref=Genbank:WP_038272750.1;Name=WP_038272750.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090351.1;locus_tag=LPH58_RS10070;product=NAD-dependent DNA ligase LigA;protein_id=WP_038272750.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2375341 2375571 . - . ID=gene-LPH58_RS10075;Name=LPH58_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10075;old_locus_tag=LPH58_10075 NZ_CP087690.1 GeneMarkS-2+ CDS 2375341 2375571 . - 0 ID=cds-WP_038272749.1;Parent=gene-LPH58_RS10075;Dbxref=Genbank:WP_038272749.1;Name=WP_038272749.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10075;product=hypothetical protein;protein_id=WP_038272749.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2375838 2376569 . - . ID=gene-LPH58_RS10080;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=LPH58_RS10080;old_locus_tag=LPH58_10080 NZ_CP087690.1 Protein Homology CDS 2375838 2376569 . - 0 ID=cds-WP_038272747.1;Parent=gene-LPH58_RS10080;Dbxref=Genbank:WP_038272747.1;Name=WP_038272747.1;Ontology_term=GO:0000917,GO:0005515;gbkey=CDS;gene=zipA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903841.1;locus_tag=LPH58_RS10080;product=cell division protein ZipA;protein_id=WP_038272747.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2376627 2380130 . - . ID=gene-LPH58_RS10085;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LPH58_RS10085;old_locus_tag=LPH58_10085 NZ_CP087690.1 Protein Homology CDS 2376627 2380130 . - 0 ID=cds-WP_114867185.1;Parent=gene-LPH58_RS10085;Dbxref=Genbank:WP_114867185.1;Name=WP_114867185.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084630.1;locus_tag=LPH58_RS10085;product=chromosome segregation protein SMC;protein_id=WP_114867185.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2380347 2380796 . - . ID=gene-LPH58_RS10090;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LPH58_RS10090;old_locus_tag=LPH58_10090 NZ_CP087690.1 Protein Homology CDS 2380347 2380796 . - 0 ID=cds-WP_038271671.1;Parent=gene-LPH58_RS10090;Dbxref=Genbank:WP_038271671.1;Name=WP_038271671.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014160531.1;locus_tag=LPH58_RS10090;product=50S ribosomal protein L9;protein_id=WP_038271671.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2380951 2381181 . - . ID=gene-LPH58_RS10095;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LPH58_RS10095;old_locus_tag=LPH58_10095 NZ_CP087690.1 Protein Homology CDS 2380951 2381181 . - 0 ID=cds-WP_038271673.1;Parent=gene-LPH58_RS10095;Dbxref=Genbank:WP_038271673.1;Name=WP_038271673.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804494.1;locus_tag=LPH58_RS10095;product=30S ribosomal protein S18;protein_id=WP_038271673.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2381194 2381625 . - . ID=gene-LPH58_RS10100;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LPH58_RS10100;old_locus_tag=LPH58_10100 NZ_CP087690.1 Protein Homology CDS 2381194 2381625 . - 0 ID=cds-WP_038271676.1;Parent=gene-LPH58_RS10100;Dbxref=Genbank:WP_038271676.1;Name=WP_038271676.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090345.1;locus_tag=LPH58_RS10100;product=30S ribosomal protein S6;protein_id=WP_038271676.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2381851 2382189 . - . ID=gene-LPH58_RS10105;Name=LPH58_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10105;old_locus_tag=LPH58_10105 NZ_CP087690.1 Protein Homology CDS 2381851 2382189 . - 0 ID=cds-WP_038271677.1;Parent=gene-LPH58_RS10105;Dbxref=Genbank:WP_038271677.1;Name=WP_038271677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660371.1;locus_tag=LPH58_RS10105;product=iron-sulfur cluster assembly accessory protein;protein_id=WP_038271677.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2382408 2383808 . + . ID=gene-LPH58_RS10110;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=LPH58_RS10110;old_locus_tag=LPH58_10110 NZ_CP087690.1 Protein Homology CDS 2382408 2383808 . + 0 ID=cds-WP_038271678.1;Parent=gene-LPH58_RS10110;Dbxref=Genbank:WP_038271678.1;Name=WP_038271678.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237793.1;locus_tag=LPH58_RS10110;product=asparagine--tRNA ligase;protein_id=WP_038271678.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2385177 2385959 . + . ID=gene-LPH58_RS10115;Name=LPH58_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10115;old_locus_tag=LPH58_10115 NZ_CP087690.1 Protein Homology CDS 2385177 2385959 . + 0 ID=cds-WP_230428509.1;Parent=gene-LPH58_RS10115;Dbxref=Genbank:WP_230428509.1;Name=WP_230428509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014607499.1;locus_tag=LPH58_RS10115;product=ABC transporter permease;protein_id=WP_230428509.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2385969 2386709 . + . ID=gene-LPH58_RS10120;Name=LPH58_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10120;old_locus_tag=LPH58_10120 NZ_CP087690.1 Protein Homology CDS 2385969 2386709 . + 0 ID=cds-WP_038271683.1;Parent=gene-LPH58_RS10120;Dbxref=Genbank:WP_038271683.1;Name=WP_038271683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851969.1;locus_tag=LPH58_RS10120;product=ABC transporter ATP-binding protein;protein_id=WP_038271683.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2387047 2387332 . + . ID=gene-LPH58_RS10125;Name=LPH58_RS10125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS10125;old_locus_tag=LPH58_10125;pseudo=true NZ_CP087690.1 Protein Homology CDS 2387047 2387332 . + 0 ID=cds-LPH58_RS10125;Parent=gene-LPH58_RS10125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894989.1;locus_tag=LPH58_RS10125;product=DUF4190 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2387626 2388681 . + . ID=gene-LPH58_RS10130;Name=LPH58_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10130;old_locus_tag=LPH58_10130 NZ_CP087690.1 Protein Homology CDS 2387626 2388681 . + 0 ID=cds-WP_038271686.1;Parent=gene-LPH58_RS10130;Dbxref=Genbank:WP_038271686.1;Name=WP_038271686.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851254.1;locus_tag=LPH58_RS10130;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_038271686.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2388678 2389733 . + . ID=gene-LPH58_RS10135;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LPH58_RS10135;old_locus_tag=LPH58_10135 NZ_CP087690.1 Protein Homology CDS 2388678 2389733 . + 0 ID=cds-WP_038271688.1;Parent=gene-LPH58_RS10135;Dbxref=Genbank:WP_038271688.1;Name=WP_038271688.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084645.1;locus_tag=LPH58_RS10135;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_038271688.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2389727 2390626 . + . ID=gene-LPH58_RS10140;Name=LPH58_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10140;old_locus_tag=LPH58_10140 NZ_CP087690.1 Protein Homology CDS 2389727 2390626 . + 0 ID=cds-WP_038271689.1;Parent=gene-LPH58_RS10140;Dbxref=Genbank:WP_038271689.1;Name=WP_038271689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851255.1;locus_tag=LPH58_RS10140;product=DMT family transporter;protein_id=WP_038271689.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2390634 2391338 . - . ID=gene-LPH58_RS10145;Name=LPH58_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10145;old_locus_tag=LPH58_10145 NZ_CP087690.1 Protein Homology CDS 2390634 2391338 . - 0 ID=cds-WP_038271691.1;Parent=gene-LPH58_RS10145;Dbxref=Genbank:WP_038271691.1;Name=WP_038271691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894993.1;locus_tag=LPH58_RS10145;product=phosphatase PAP2 family protein;protein_id=WP_038271691.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2391319 2392584 . - . ID=gene-LPH58_RS10150;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LPH58_RS10150;old_locus_tag=LPH58_10150 NZ_CP087690.1 Protein Homology CDS 2391319 2392584 . - 0 ID=cds-WP_038271693.1;Parent=gene-LPH58_RS10150;Dbxref=Genbank:WP_038271693.1;Name=WP_038271693.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183267.1;locus_tag=LPH58_RS10150;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_038271693.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2392807 2394024 . + . ID=gene-LPH58_RS10155;Name=LPH58_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10155;old_locus_tag=LPH58_10155 NZ_CP087690.1 Protein Homology CDS 2392807 2394024 . + 0 ID=cds-WP_038271694.1;Parent=gene-LPH58_RS10155;Dbxref=Genbank:WP_038271694.1;Name=WP_038271694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894996.1;locus_tag=LPH58_RS10155;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_038271694.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2394021 2394599 . + . ID=gene-LPH58_RS10160;Name=LPH58_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10160;old_locus_tag=LPH58_10160 NZ_CP087690.1 Protein Homology CDS 2394021 2394599 . + 0 ID=cds-WP_038271696.1;Parent=gene-LPH58_RS10160;Dbxref=Genbank:WP_038271696.1;Name=WP_038271696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090324.1;locus_tag=LPH58_RS10160;product=response regulator transcription factor;protein_id=WP_038271696.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2395153 2396031 . - . ID=gene-LPH58_RS10165;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LPH58_RS10165;old_locus_tag=LPH58_10165 NZ_CP087690.1 Protein Homology CDS 2395153 2396031 . - 0 ID=cds-WP_038271698.1;Parent=gene-LPH58_RS10165;Dbxref=Genbank:WP_038271698.1;Name=WP_038271698.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007962895.1;locus_tag=LPH58_RS10165;product=translation elongation factor Ts;protein_id=WP_038271698.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2396224 2397021 . - . ID=gene-LPH58_RS10170;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LPH58_RS10170;old_locus_tag=LPH58_10170 NZ_CP087690.1 Protein Homology CDS 2396224 2397021 . - 0 ID=cds-WP_038271700.1;Parent=gene-LPH58_RS10170;Dbxref=Genbank:WP_038271700.1;Name=WP_038271700.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084652.1;locus_tag=LPH58_RS10170;product=30S ribosomal protein S2;protein_id=WP_038271700.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2397499 2397651 . + . ID=gene-LPH58_RS10175;Name=LPH58_RS10175;end_range=2397651,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS10175;old_locus_tag=LPH58_10175;partial=true;pseudo=true;start_range=.,2397499 NZ_CP087690.1 Protein Homology CDS 2397499 2397651 . + 0 ID=cds-LPH58_RS10175;Parent=gene-LPH58_RS10175;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2397651,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LPH58_RS10175;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,2397499;transl_table=11 NZ_CP087690.1 RefSeq gene 2397954 2398031 . + . ID=gene-LPH58_RS10180;Name=LPH58_RS10180;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS10180;old_locus_tag=LPH58_10180 NZ_CP087690.1 tRNAscan-SE tRNA 2397954 2398031 . + . ID=rna-LPH58_RS10180;Parent=gene-LPH58_RS10180;anticodon=(pos:2397989..2397991);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10180;product=tRNA-Arg NZ_CP087690.1 tRNAscan-SE exon 2397954 2398031 . + . ID=exon-LPH58_RS10180-1;Parent=rna-LPH58_RS10180;anticodon=(pos:2397989..2397991);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10180;product=tRNA-Arg NZ_CP087690.1 RefSeq gene 2398454 2400214 . + . ID=gene-LPH58_RS10185;Name=LPH58_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10185;old_locus_tag=LPH58_10185 NZ_CP087690.1 Protein Homology CDS 2398454 2400214 . + 0 ID=cds-WP_038271705.1;Parent=gene-LPH58_RS10185;Dbxref=Genbank:WP_038271705.1;Name=WP_038271705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084653.1;locus_tag=LPH58_RS10185;product=ABC transporter ATP-binding protein/permease;protein_id=WP_038271705.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2400621 2400833 . - . ID=gene-LPH58_RS10190;Name=LPH58_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10190;old_locus_tag=LPH58_10190 NZ_CP087690.1 GeneMarkS-2+ CDS 2400621 2400833 . - 0 ID=cds-WP_038271708.1;Parent=gene-LPH58_RS10190;Dbxref=Genbank:WP_038271708.1;Name=WP_038271708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10190;product=hypothetical protein;protein_id=WP_038271708.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2401462 2401704 . + . ID=gene-LPH58_RS10195;Name=LPH58_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10195;old_locus_tag=LPH58_10195 NZ_CP087690.1 GeneMarkS-2+ CDS 2401462 2401704 . + 0 ID=cds-WP_160165195.1;Parent=gene-LPH58_RS10195;Dbxref=Genbank:WP_160165195.1;Name=WP_160165195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10195;product=hypothetical protein;protein_id=WP_160165195.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2402141 2402797 . + . ID=gene-LPH58_RS10200;Name=LPH58_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10200;old_locus_tag=LPH58_10200 NZ_CP087690.1 Protein Homology CDS 2402141 2402797 . + 0 ID=cds-WP_038271715.1;Parent=gene-LPH58_RS10200;Dbxref=Genbank:WP_038271715.1;Name=WP_038271715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002804883.1;locus_tag=LPH58_RS10200;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_038271715.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2402820 2404178 . + . ID=gene-LPH58_RS10205;Name=LPH58_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10205;old_locus_tag=LPH58_10205 NZ_CP087690.1 Protein Homology CDS 2402820 2404178 . + 0 ID=cds-WP_038271718.1;Parent=gene-LPH58_RS10205;Dbxref=Genbank:WP_038271718.1;Name=WP_038271718.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852053.1;locus_tag=LPH58_RS10205;product=TolC family outer membrane protein;protein_id=WP_038271718.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2404928 2405680 . - . ID=gene-LPH58_RS10210;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=LPH58_RS10210;old_locus_tag=LPH58_10210 NZ_CP087690.1 Protein Homology CDS 2404928 2405680 . - 0 ID=cds-WP_038271721.1;Parent=gene-LPH58_RS10210;Dbxref=Genbank:WP_038271721.1;Name=WP_038271721.1;Ontology_term=GO:0009245,GO:0008758;gbkey=CDS;gene=lpxH;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084656.1;locus_tag=LPH58_RS10210;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_038271721.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2406786 2408312 . - . ID=gene-LPH58_RS10215;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LPH58_RS10215;old_locus_tag=LPH58_10215 NZ_CP087690.1 Protein Homology CDS 2406786 2408312 . - 0 ID=cds-WP_038271776.1;Parent=gene-LPH58_RS10215;Dbxref=Genbank:WP_038271776.1;Name=WP_038271776.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895008.1;locus_tag=LPH58_RS10215;product=exopolyphosphatase;protein_id=WP_038271776.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2408381 2410477 . - . ID=gene-LPH58_RS10220;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LPH58_RS10220;old_locus_tag=LPH58_10220 NZ_CP087690.1 Protein Homology CDS 2408381 2410477 . - 0 ID=cds-WP_160199336.1;Parent=gene-LPH58_RS10220;Dbxref=Genbank:WP_160199336.1;Name=WP_160199336.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895009.1;locus_tag=LPH58_RS10220;product=polyphosphate kinase 1;protein_id=WP_160199336.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2410582 2411856 . - . ID=gene-LPH58_RS10225;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LPH58_RS10225;old_locus_tag=LPH58_10225 NZ_CP087690.1 Protein Homology CDS 2410582 2411856 . - 0 ID=cds-WP_230428300.1;Parent=gene-LPH58_RS10225;Dbxref=Genbank:WP_230428300.1;Name=WP_230428300.1;Ontology_term=GO:0000160,GO:0006796,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852050.1;locus_tag=LPH58_RS10225;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_230428300.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2411949 2412638 . - . ID=gene-LPH58_RS10230;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LPH58_RS10230;old_locus_tag=LPH58_10230 NZ_CP087690.1 Protein Homology CDS 2411949 2412638 . - 0 ID=cds-WP_038271729.1;Parent=gene-LPH58_RS10230;Dbxref=Genbank:WP_038271729.1;Name=WP_038271729.1;Ontology_term=GO:0000160,GO:0006355,GO:0006796,GO:0000156,GO:0003700;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341114.1;locus_tag=LPH58_RS10230;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_038271729.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2412720 2414354 . - . ID=gene-LPH58_RS10235;Name=LPH58_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10235;old_locus_tag=LPH58_10235 NZ_CP087690.1 Protein Homology CDS 2412720 2414354 . - 0 ID=cds-WP_038271732.1;Parent=gene-LPH58_RS10235;Dbxref=Genbank:WP_038271732.1;Name=WP_038271732.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098320.1;locus_tag=LPH58_RS10235;product=M48 family metalloprotease;protein_id=WP_038271732.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2414475 2414780 . + . ID=gene-LPH58_RS10240;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LPH58_RS10240;old_locus_tag=LPH58_10240 NZ_CP087690.1 Protein Homology CDS 2414475 2414780 . + 0 ID=cds-WP_038271736.1;Parent=gene-LPH58_RS10240;Dbxref=Genbank:WP_038271736.1;Name=WP_038271736.1;Ontology_term=GO:0015036;gbkey=CDS;gene=grxC;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084662.1;locus_tag=LPH58_RS10240;product=glutaredoxin 3;protein_id=WP_038271736.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2415667 2416674 . + . ID=gene-LPH58_RS10245;Name=LPH58_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10245;old_locus_tag=LPH58_10245 NZ_CP087690.1 Protein Homology CDS 2415667 2416674 . + 0 ID=cds-WP_038271738.1;Parent=gene-LPH58_RS10245;Dbxref=Genbank:WP_038271738.1;Name=WP_038271738.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852046.1;locus_tag=LPH58_RS10245;product=isocitrate dehydrogenase;protein_id=WP_038271738.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2417083 2417649 . - . ID=gene-LPH58_RS10250;Name=LPH58_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10250;old_locus_tag=LPH58_10250 NZ_CP087690.1 Protein Homology CDS 2417083 2417649 . - 0 ID=cds-WP_038271778.1;Parent=gene-LPH58_RS10250;Dbxref=Genbank:WP_038271778.1;Name=WP_038271778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084664.1;locus_tag=LPH58_RS10250;product=DUF4019 domain-containing protein;protein_id=WP_038271778.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2418640 2419158 . + . ID=gene-LPH58_RS10255;Name=LPH58_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10255;old_locus_tag=LPH58_10255 NZ_CP087690.1 Protein Homology CDS 2418640 2419158 . + 0 ID=cds-WP_038271739.1;Parent=gene-LPH58_RS10255;Dbxref=Genbank:WP_038271739.1;Name=WP_038271739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087533.1;locus_tag=LPH58_RS10255;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_038271739.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2419187 2420488 . + . ID=gene-LPH58_RS10260;Name=LPH58_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10260;old_locus_tag=LPH58_10260 NZ_CP087690.1 Protein Homology CDS 2419187 2420488 . + 0 ID=cds-WP_038271742.1;Parent=gene-LPH58_RS10260;Dbxref=Genbank:WP_038271742.1;Name=WP_038271742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087534.1;locus_tag=LPH58_RS10260;product=ectonucleotide pyrophosphatase/phosphodiesterase;protein_id=WP_038271742.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2420808 2421131 . + . ID=gene-LPH58_RS10265;Name=LPH58_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10265;old_locus_tag=LPH58_10265 NZ_CP087690.1 Protein Homology CDS 2420808 2421131 . + 0 ID=cds-WP_081755460.1;Parent=gene-LPH58_RS10265;Dbxref=Genbank:WP_081755460.1;Name=WP_081755460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994928.1;locus_tag=LPH58_RS10265;product=ferredoxin family protein;protein_id=WP_081755460.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2421766 2423253 . - . ID=gene-LPH58_RS10270;Name=LPH58_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10270;old_locus_tag=LPH58_10270 NZ_CP087690.1 Protein Homology CDS 2421766 2423253 . - 0 ID=cds-WP_038271747.1;Parent=gene-LPH58_RS10270;Dbxref=Genbank:WP_038271747.1;Name=WP_038271747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852042.1;locus_tag=LPH58_RS10270;product=hypothetical protein;protein_id=WP_038271747.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2423372 2423971 . - . ID=gene-LPH58_RS10275;Name=LPH58_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10275;old_locus_tag=LPH58_10275 NZ_CP087690.1 Protein Homology CDS 2423372 2423971 . - 0 ID=cds-WP_038271749.1;Parent=gene-LPH58_RS10275;Dbxref=Genbank:WP_038271749.1;Name=WP_038271749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410314.1;locus_tag=LPH58_RS10275;product=NfuA family Fe-S biogenesis protein;protein_id=WP_038271749.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2424057 2424407 . + . ID=gene-LPH58_RS10280;Name=LPH58_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10280;old_locus_tag=LPH58_10280 NZ_CP087690.1 Protein Homology CDS 2424057 2424407 . + 0 ID=cds-WP_038271751.1;Parent=gene-LPH58_RS10280;Dbxref=Genbank:WP_038271751.1;Name=WP_038271751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087537.1;locus_tag=LPH58_RS10280;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_038271751.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2424415 2424828 . + . ID=gene-LPH58_RS10285;Name=LPH58_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10285;old_locus_tag=LPH58_10285 NZ_CP087690.1 Protein Homology CDS 2424415 2424828 . + 0 ID=cds-WP_038271753.1;Parent=gene-LPH58_RS10285;Dbxref=Genbank:WP_038271753.1;Name=WP_038271753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338113.1;locus_tag=LPH58_RS10285;product=energy transducer TonB;protein_id=WP_038271753.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2425100 2425285 . + . ID=gene-LPH58_RS10290;Name=LPH58_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10290;old_locus_tag=LPH58_10290 NZ_CP087690.1 GeneMarkS-2+ CDS 2425100 2425285 . + 0 ID=cds-WP_081755461.1;Parent=gene-LPH58_RS10290;Dbxref=Genbank:WP_081755461.1;Name=WP_081755461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10290;product=hypothetical protein;protein_id=WP_081755461.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2425799 2426791 . - . ID=gene-LPH58_RS10295;Name=LPH58_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10295;old_locus_tag=LPH58_10295 NZ_CP087690.1 Protein Homology CDS 2425799 2426791 . - 0 ID=cds-WP_051482353.1;Parent=gene-LPH58_RS10295;Dbxref=Genbank:WP_051482353.1;Name=WP_051482353.1;Ontology_term=GO:0001522,GO:0009451,GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852040.1;locus_tag=LPH58_RS10295;product=RluA family pseudouridine synthase;protein_id=WP_051482353.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2427193 2430597 . + . ID=gene-LPH58_RS10300;Name=LPH58_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10300;old_locus_tag=LPH58_10300 NZ_CP087690.1 Protein Homology CDS 2427193 2430597 . + 0 ID=cds-WP_038271755.1;Parent=gene-LPH58_RS10300;Dbxref=Genbank:WP_038271755.1;Name=WP_038271755.1;Ontology_term=GO:0006401,GO:0004540;gbkey=CDS;go_function=ribonuclease activity|0004540||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895025.1;locus_tag=LPH58_RS10300;product=Rne/Rng family ribonuclease;protein_id=WP_038271755.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2431302 2431949 . - . ID=gene-LPH58_RS10305;Name=LPH58_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10305;old_locus_tag=LPH58_10305 NZ_CP087690.1 Protein Homology CDS 2431302 2431949 . - 0 ID=cds-WP_038271757.1;Parent=gene-LPH58_RS10305;Dbxref=Genbank:WP_038271757.1;Name=WP_038271757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011408972.1;locus_tag=LPH58_RS10305;product=response regulator transcription factor;protein_id=WP_038271757.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2432216 2432974 . - . ID=gene-LPH58_RS10310;Name=LPH58_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10310;old_locus_tag=LPH58_10310 NZ_CP087690.1 Protein Homology CDS 2432216 2432974 . - 0 ID=cds-WP_038271783.1;Parent=gene-LPH58_RS10310;Dbxref=Genbank:WP_038271783.1;Name=WP_038271783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337128.1;locus_tag=LPH58_RS10310;product=sulfurtransferase;protein_id=WP_038271783.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2434656 2435054 . + . ID=gene-LPH58_RS10315;Name=LPH58_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10315;old_locus_tag=LPH58_10315 NZ_CP087690.1 Protein Homology CDS 2434656 2435054 . + 0 ID=cds-WP_038271784.1;Parent=gene-LPH58_RS10315;Dbxref=Genbank:WP_038271784.1;Name=WP_038271784.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338114.1;locus_tag=LPH58_RS10315;product=response regulator;protein_id=WP_038271784.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2436416 2437027 . - . ID=gene-LPH58_RS10320;Name=LPH58_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10320;old_locus_tag=LPH58_10320 NZ_CP087690.1 Protein Homology CDS 2436416 2437027 . - 0 ID=cds-WP_038271760.1;Parent=gene-LPH58_RS10320;Dbxref=Genbank:WP_038271760.1;Name=WP_038271760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037422.1;locus_tag=LPH58_RS10320;product=superoxide dismutase;protein_id=WP_038271760.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2437285 2437719 . + . ID=gene-LPH58_RS10325;Name=LPH58_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10325;old_locus_tag=LPH58_10325 NZ_CP087690.1 Protein Homology CDS 2437285 2437719 . + 0 ID=cds-WP_038271763.1;Parent=gene-LPH58_RS10325;Dbxref=Genbank:WP_038271763.1;Name=WP_038271763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450339.1;locus_tag=LPH58_RS10325;product=ribonuclease;protein_id=WP_038271763.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2437716 2438132 . + . ID=gene-LPH58_RS10330;Name=LPH58_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10330;old_locus_tag=LPH58_10330 NZ_CP087690.1 Protein Homology CDS 2437716 2438132 . + 0 ID=cds-WP_038271765.1;Parent=gene-LPH58_RS10330;Dbxref=Genbank:WP_038271765.1;Name=WP_038271765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852034.1;locus_tag=LPH58_RS10330;product=barstar family protein;protein_id=WP_038271765.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2438188 2440059 . - . ID=gene-LPH58_RS10335;Name=LPH58_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10335;old_locus_tag=LPH58_10335 NZ_CP087690.1 Protein Homology CDS 2438188 2440059 . - 0 ID=cds-WP_038271767.1;Parent=gene-LPH58_RS10335;Dbxref=Genbank:WP_038271767.1;Name=WP_038271767.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005923190.1;locus_tag=LPH58_RS10335;product=ATP-binding cassette domain-containing protein;protein_id=WP_038271767.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2440367 2441926 . - . ID=gene-LPH58_RS10340;Name=LPH58_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10340;old_locus_tag=LPH58_10340 NZ_CP087690.1 Protein Homology CDS 2440367 2441926 . - 0 ID=cds-WP_038271785.1;Parent=gene-LPH58_RS10340;Dbxref=Genbank:WP_038271785.1;Name=WP_038271785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098324.1;locus_tag=LPH58_RS10340;product=YdiU family protein;protein_id=WP_038271785.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2442325 2442537 . - . ID=gene-LPH58_RS10345;Name=LPH58_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10345;old_locus_tag=LPH58_10345 NZ_CP087690.1 Protein Homology CDS 2442325 2442537 . - 0 ID=cds-WP_038271770.1;Parent=gene-LPH58_RS10345;Dbxref=Genbank:WP_038271770.1;Name=WP_038271770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005913053.1;locus_tag=LPH58_RS10345;product=cold-shock protein;protein_id=WP_038271770.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2444059 2446131 . + . ID=gene-LPH58_RS10350;Name=LPH58_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10350;old_locus_tag=LPH58_10350 NZ_CP087690.1 Protein Homology CDS 2444059 2446131 . + 0 ID=cds-WP_038271772.1;Parent=gene-LPH58_RS10350;Dbxref=Genbank:WP_038271772.1;Name=WP_038271772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895041.1;locus_tag=LPH58_RS10350;product=EAL domain-containing protein;protein_id=WP_038271772.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2446521 2447390 . - . ID=gene-LPH58_RS10355;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LPH58_RS10355;old_locus_tag=LPH58_10355 NZ_CP087690.1 Protein Homology CDS 2446521 2447390 . - 0 ID=cds-WP_038271774.1;Parent=gene-LPH58_RS10355;Dbxref=Genbank:WP_038271774.1;Name=WP_038271774.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084683.1;locus_tag=LPH58_RS10355;product=protease HtpX;protein_id=WP_038271774.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2449191 2450381 . - . ID=gene-LPH58_RS10360;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LPH58_RS10360;old_locus_tag=LPH58_10360 NZ_CP087690.1 Protein Homology CDS 2449191 2450381 . - 0 ID=cds-WP_038273292.1;Parent=gene-LPH58_RS10360;Dbxref=Genbank:WP_038273292.1;Name=WP_038273292.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=LPH58_RS10360;product=elongation factor Tu;protein_id=WP_038273292.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2450489 2452606 . - . ID=gene-LPH58_RS10365;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LPH58_RS10365;old_locus_tag=LPH58_10365 NZ_CP087690.1 Protein Homology CDS 2450489 2452606 . - 0 ID=cds-WP_038272873.1;Parent=gene-LPH58_RS10365;Dbxref=Genbank:WP_038272873.1;Name=WP_038272873.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895046.1;locus_tag=LPH58_RS10365;product=elongation factor G;protein_id=WP_038272873.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2452745 2453212 . - . ID=gene-LPH58_RS10370;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LPH58_RS10370;old_locus_tag=LPH58_10370 NZ_CP087690.1 Protein Homology CDS 2452745 2453212 . - 0 ID=cds-WP_038272876.1;Parent=gene-LPH58_RS10370;Dbxref=Genbank:WP_038272876.1;Name=WP_038272876.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006450629.1;locus_tag=LPH58_RS10370;product=30S ribosomal protein S7;protein_id=WP_038272876.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2453228 2453602 . - . ID=gene-LPH58_RS10375;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LPH58_RS10375;old_locus_tag=LPH58_10375 NZ_CP087690.1 Protein Homology CDS 2453228 2453602 . - 0 ID=cds-WP_038272877.1;Parent=gene-LPH58_RS10375;Dbxref=Genbank:WP_038272877.1;Name=WP_038272877.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003469157.1;locus_tag=LPH58_RS10375;product=30S ribosomal protein S12;protein_id=WP_038272877.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2453847 2458070 . - . ID=gene-LPH58_RS10380;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LPH58_RS10380;old_locus_tag=LPH58_10380 NZ_CP087690.1 Protein Homology CDS 2453847 2458070 . - 0 ID=cds-WP_038272879.1;Parent=gene-LPH58_RS10380;Dbxref=Genbank:WP_038272879.1;Name=WP_038272879.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337137.1;locus_tag=LPH58_RS10380;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_038272879.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2458177 2462331 . - . ID=gene-LPH58_RS10385;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LPH58_RS10385;old_locus_tag=LPH58_10385 NZ_CP087690.1 Protein Homology CDS 2458177 2462331 . - 0 ID=cds-WP_038272880.1;Parent=gene-LPH58_RS10385;Dbxref=Genbank:WP_038272880.1;Name=WP_038272880.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852081.1;locus_tag=LPH58_RS10385;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_038272880.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2462587 2462955 . - . ID=gene-LPH58_RS10390;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LPH58_RS10390;old_locus_tag=LPH58_10390 NZ_CP087690.1 Protein Homology CDS 2462587 2462955 . - 0 ID=cds-WP_038272881.1;Parent=gene-LPH58_RS10390;Dbxref=Genbank:WP_038272881.1;Name=WP_038272881.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084690.1;locus_tag=LPH58_RS10390;product=50S ribosomal protein L7/L12;protein_id=WP_038272881.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2463010 2463537 . - . ID=gene-LPH58_RS10395;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LPH58_RS10395;old_locus_tag=LPH58_10395 NZ_CP087690.1 Protein Homology CDS 2463010 2463537 . - 0 ID=cds-WP_038272883.1;Parent=gene-LPH58_RS10395;Dbxref=Genbank:WP_038272883.1;Name=WP_038272883.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011036116.1;locus_tag=LPH58_RS10395;product=50S ribosomal protein L10;protein_id=WP_038272883.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2464039 2464737 . - . ID=gene-LPH58_RS10400;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LPH58_RS10400;old_locus_tag=LPH58_10400 NZ_CP087690.1 Protein Homology CDS 2464039 2464737 . - 0 ID=cds-WP_038272885.1;Parent=gene-LPH58_RS10400;Dbxref=Genbank:WP_038272885.1;Name=WP_038272885.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010341341.1;locus_tag=LPH58_RS10400;product=50S ribosomal protein L1;protein_id=WP_038272885.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2464741 2465169 . - . ID=gene-LPH58_RS10405;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LPH58_RS10405;old_locus_tag=LPH58_10405 NZ_CP087690.1 Protein Homology CDS 2464741 2465169 . - 0 ID=cds-WP_038272888.1;Parent=gene-LPH58_RS10405;Dbxref=Genbank:WP_038272888.1;Name=WP_038272888.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993334.1;locus_tag=LPH58_RS10405;product=50S ribosomal protein L11;protein_id=WP_038272888.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2465369 2465926 . - . ID=gene-LPH58_RS10410;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LPH58_RS10410;old_locus_tag=LPH58_10410 NZ_CP087690.1 Protein Homology CDS 2465369 2465926 . - 0 ID=cds-WP_038272890.1;Parent=gene-LPH58_RS10410;Dbxref=Genbank:WP_038272890.1;Name=WP_038272890.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090734.1;locus_tag=LPH58_RS10410;product=transcription termination/antitermination protein NusG;protein_id=WP_038272890.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2465940 2466347 . - . ID=gene-LPH58_RS10415;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LPH58_RS10415;old_locus_tag=LPH58_10415 NZ_CP087690.1 Protein Homology CDS 2465940 2466347 . - 0 ID=cds-WP_038272892.1;Parent=gene-LPH58_RS10415;Dbxref=Genbank:WP_038272892.1;Name=WP_038272892.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005993330.1;locus_tag=LPH58_RS10415;product=preprotein translocase subunit SecE;protein_id=WP_038272892.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2466397 2466472 . - . ID=gene-LPH58_RS10420;Name=LPH58_RS10420;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS10420;old_locus_tag=LPH58_10420 NZ_CP087690.1 tRNAscan-SE tRNA 2466397 2466472 . - . ID=rna-LPH58_RS10420;Parent=gene-LPH58_RS10420;anticodon=(pos:complement(2466437..2466439));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10420;product=tRNA-Trp NZ_CP087690.1 tRNAscan-SE exon 2466397 2466472 . - . ID=exon-LPH58_RS10420-1;Parent=rna-LPH58_RS10420;anticodon=(pos:complement(2466437..2466439));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10420;product=tRNA-Trp NZ_CP087690.1 RefSeq gene 2466585 2467775 . - . ID=gene-LPH58_RS10425;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LPH58_RS10425;old_locus_tag=LPH58_10425 NZ_CP087690.1 Protein Homology CDS 2466585 2467775 . - 0 ID=cds-WP_038273292.1-2;Parent=gene-LPH58_RS10425;Dbxref=Genbank:WP_038273292.1;Name=WP_038273292.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486726.1;locus_tag=LPH58_RS10425;product=elongation factor Tu;protein_id=WP_038273292.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2467816 2467891 . - . ID=gene-LPH58_RS10430;Name=LPH58_RS10430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS10430;old_locus_tag=LPH58_10430 NZ_CP087690.1 tRNAscan-SE tRNA 2467816 2467891 . - . ID=rna-LPH58_RS10430;Parent=gene-LPH58_RS10430;anticodon=(pos:complement(2467856..2467858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10430;product=tRNA-Thr NZ_CP087690.1 tRNAscan-SE exon 2467816 2467891 . - . ID=exon-LPH58_RS10430-1;Parent=rna-LPH58_RS10430;anticodon=(pos:complement(2467856..2467858));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10430;product=tRNA-Thr NZ_CP087690.1 RefSeq gene 2467926 2467999 . - . ID=gene-LPH58_RS10435;Name=LPH58_RS10435;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS10435;old_locus_tag=LPH58_10435 NZ_CP087690.1 tRNAscan-SE tRNA 2467926 2467999 . - . ID=rna-LPH58_RS10435;Parent=gene-LPH58_RS10435;anticodon=(pos:complement(2467965..2467967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10435;product=tRNA-Gly NZ_CP087690.1 tRNAscan-SE exon 2467926 2467999 . - . ID=exon-LPH58_RS10435-1;Parent=rna-LPH58_RS10435;anticodon=(pos:complement(2467965..2467967));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10435;product=tRNA-Gly NZ_CP087690.1 RefSeq gene 2468034 2468120 . - . ID=gene-LPH58_RS10440;Name=LPH58_RS10440;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS10440;old_locus_tag=LPH58_10440 NZ_CP087690.1 tRNAscan-SE tRNA 2468034 2468120 . - . ID=rna-LPH58_RS10440;Parent=gene-LPH58_RS10440;anticodon=(pos:complement(2468084..2468086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10440;product=tRNA-Tyr NZ_CP087690.1 tRNAscan-SE exon 2468034 2468120 . - . ID=exon-LPH58_RS10440-1;Parent=rna-LPH58_RS10440;anticodon=(pos:complement(2468084..2468086));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10440;product=tRNA-Tyr NZ_CP087690.1 RefSeq gene 2468314 2469405 . - . ID=gene-LPH58_RS10445;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LPH58_RS10445;old_locus_tag=LPH58_10445 NZ_CP087690.1 Protein Homology CDS 2468314 2469405 . - 0 ID=cds-WP_038271278.1;Parent=gene-LPH58_RS10445;Dbxref=Genbank:WP_038271278.1;Name=WP_038271278.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000506572.1;locus_tag=LPH58_RS10445;product=redox-regulated ATPase YchF;protein_id=WP_038271278.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2469460 2470038 . - . ID=gene-LPH58_RS10450;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LPH58_RS10450;old_locus_tag=LPH58_10450 NZ_CP087690.1 Protein Homology CDS 2469460 2470038 . - 0 ID=cds-WP_038271277.1;Parent=gene-LPH58_RS10450;Dbxref=Genbank:WP_038271277.1;Name=WP_038271277.1;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084699.1;locus_tag=LPH58_RS10450;product=aminoacyl-tRNA hydrolase;protein_id=WP_038271277.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2470094 2470717 . - . ID=gene-LPH58_RS10455;Name=LPH58_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10455;old_locus_tag=LPH58_10455 NZ_CP087690.1 Protein Homology CDS 2470094 2470717 . - 0 ID=cds-WP_038271276.1;Parent=gene-LPH58_RS10455;Dbxref=Genbank:WP_038271276.1;Name=WP_038271276.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087395.1;locus_tag=LPH58_RS10455;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_038271276.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2470823 2471782 . - . ID=gene-LPH58_RS10460;Name=LPH58_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10460;old_locus_tag=LPH58_10460 NZ_CP087690.1 Protein Homology CDS 2470823 2471782 . - 0 ID=cds-WP_038271290.1;Parent=gene-LPH58_RS10460;Dbxref=Genbank:WP_038271290.1;Name=WP_038271290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003486761.1;locus_tag=LPH58_RS10460;product=ribose-phosphate diphosphokinase;protein_id=WP_038271290.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2471913 2471989 . - . ID=gene-LPH58_RS10465;Name=LPH58_RS10465;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS10465;old_locus_tag=LPH58_10465 NZ_CP087690.1 tRNAscan-SE tRNA 2471913 2471989 . - . ID=rna-LPH58_RS10465;Parent=gene-LPH58_RS10465;anticodon=(pos:complement(2471953..2471955));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10465;product=tRNA-Gln NZ_CP087690.1 tRNAscan-SE exon 2471913 2471989 . - . ID=exon-LPH58_RS10465-1;Parent=rna-LPH58_RS10465;anticodon=(pos:complement(2471953..2471955));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS10465;product=tRNA-Gln NZ_CP087690.1 RefSeq gene 2471993 2472871 . - . ID=gene-LPH58_RS10470;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LPH58_RS10470;old_locus_tag=LPH58_10470 NZ_CP087690.1 Protein Homology CDS 2471993 2472871 . - 0 ID=cds-WP_114867187.1;Parent=gene-LPH58_RS10470;Dbxref=Genbank:WP_114867187.1;Name=WP_114867187.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084712.1;locus_tag=LPH58_RS10470;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_114867187.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2472868 2473518 . - . ID=gene-LPH58_RS10475;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LPH58_RS10475;old_locus_tag=LPH58_10475 NZ_CP087690.1 Protein Homology CDS 2472868 2473518 . - 0 ID=cds-WP_160199309.1;Parent=gene-LPH58_RS10475;Dbxref=Genbank:WP_160199309.1;Name=WP_160199309.1;Ontology_term=GO:0009306,GO:0008320;gbkey=CDS;gene=lolB;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087398.1;locus_tag=LPH58_RS10475;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_160199309.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2473515 2475194 . - . ID=gene-LPH58_RS10480;Name=LPH58_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10480;old_locus_tag=LPH58_10480 NZ_CP087690.1 Protein Homology CDS 2473515 2475194 . - 0 ID=cds-WP_038271275.1;Parent=gene-LPH58_RS10480;Dbxref=Genbank:WP_038271275.1;Name=WP_038271275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007972526.1;locus_tag=LPH58_RS10480;product=membrane protein;protein_id=WP_038271275.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2475261 2476559 . + . ID=gene-LPH58_RS10485;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LPH58_RS10485;old_locus_tag=LPH58_10485 NZ_CP087690.1 Protein Homology CDS 2475261 2476559 . + 0 ID=cds-WP_038271288.1;Parent=gene-LPH58_RS10485;Dbxref=Genbank:WP_038271288.1;Name=WP_038271288.1;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852071.1;locus_tag=LPH58_RS10485;product=glutamyl-tRNA reductase;protein_id=WP_038271288.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2476537 2477622 . + . ID=gene-LPH58_RS10490;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LPH58_RS10490;old_locus_tag=LPH58_10490 NZ_CP087690.1 Protein Homology CDS 2476537 2477622 . + 0 ID=cds-WP_038271274.1;Parent=gene-LPH58_RS10490;Dbxref=Genbank:WP_038271274.1;Name=WP_038271274.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019300176.1;locus_tag=LPH58_RS10490;product=peptide chain release factor 1;protein_id=WP_038271274.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2478481 2478687 . - . ID=gene-LPH58_RS10495;Name=LPH58_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10495;old_locus_tag=LPH58_10495 NZ_CP087690.1 GeneMarkS-2+ CDS 2478481 2478687 . - 0 ID=cds-WP_152536621.1;Parent=gene-LPH58_RS10495;Dbxref=Genbank:WP_152536621.1;Name=WP_152536621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10495;product=hypothetical protein;protein_id=WP_152536621.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2479430 2479561 . + . ID=gene-LPH58_RS12020;Name=LPH58_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12020 NZ_CP087690.1 GeneMarkS-2+ CDS 2479430 2479561 . + 0 ID=cds-WP_267903160.1;Parent=gene-LPH58_RS12020;Dbxref=Genbank:WP_267903160.1;Name=WP_267903160.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12020;product=hypothetical protein;protein_id=WP_267903160.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2480294 2482468 . - . ID=gene-LPH58_RS10500;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=LPH58_RS10500;old_locus_tag=LPH58_10500 NZ_CP087690.1 Protein Homology CDS 2480294 2482468 . - 0 ID=cds-WP_114867227.1;Parent=gene-LPH58_RS10500;Dbxref=Genbank:WP_114867227.1;Name=WP_114867227.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852069.1;locus_tag=LPH58_RS10500;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_114867227.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2482800 2482934 . - . ID=gene-LPH58_RS12025;Name=LPH58_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12025 NZ_CP087690.1 GeneMarkS-2+ CDS 2482800 2482934 . - 0 ID=cds-WP_267903162.1;Parent=gene-LPH58_RS12025;Dbxref=Genbank:WP_267903162.1;Name=WP_267903162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12025;product=hypothetical protein;protein_id=WP_267903162.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2483334 2483861 . - . ID=gene-LPH58_RS10505;Name=LPH58_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10505;old_locus_tag=LPH58_10505 NZ_CP087690.1 Protein Homology CDS 2483334 2483861 . - 0 ID=cds-WP_038271270.1;Parent=gene-LPH58_RS10505;Dbxref=Genbank:WP_038271270.1;Name=WP_038271270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007966252.1;locus_tag=LPH58_RS10505;product=alpha/beta hydrolase;protein_id=WP_038271270.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2484255 2484824 . + . ID=gene-LPH58_RS10510;Name=LPH58_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10510;old_locus_tag=LPH58_10510 NZ_CP087690.1 Protein Homology CDS 2484255 2484824 . + 0 ID=cds-WP_038271269.1;Parent=gene-LPH58_RS10510;Dbxref=Genbank:WP_038271269.1;Name=WP_038271269.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084727.1;locus_tag=LPH58_RS10510;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_038271269.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2484944 2485102 . - . ID=gene-LPH58_RS10515;Name=LPH58_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10515;old_locus_tag=LPH58_10515 NZ_CP087690.1 GeneMarkS-2+ CDS 2484944 2485102 . - 0 ID=cds-WP_160165177.1;Parent=gene-LPH58_RS10515;Dbxref=Genbank:WP_160165177.1;Name=WP_160165177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10515;product=hypothetical protein;protein_id=WP_160165177.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2485960 2486178 . + . ID=gene-LPH58_RS10520;Name=LPH58_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10520;old_locus_tag=LPH58_10520 NZ_CP087690.1 GeneMarkS-2+ CDS 2485960 2486178 . + 0 ID=cds-WP_162814107.1;Parent=gene-LPH58_RS10520;Dbxref=Genbank:WP_162814107.1;Name=WP_162814107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10520;product=hypothetical protein;protein_id=WP_162814107.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2486241 2486438 . + . ID=gene-LPH58_RS10525;Name=LPH58_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10525;old_locus_tag=LPH58_10525 NZ_CP087690.1 GeneMarkS-2+ CDS 2486241 2486438 . + 0 ID=cds-WP_038271268.1;Parent=gene-LPH58_RS10525;Dbxref=Genbank:WP_038271268.1;Name=WP_038271268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10525;product=hypothetical protein;protein_id=WP_038271268.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2486791 2487003 . - . ID=gene-LPH58_RS10530;Name=LPH58_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10530;old_locus_tag=LPH58_10530 NZ_CP087690.1 GeneMarkS-2+ CDS 2486791 2487003 . - 0 ID=cds-WP_152536618.1;Parent=gene-LPH58_RS10530;Dbxref=Genbank:WP_152536618.1;Name=WP_152536618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10530;product=hypothetical protein;protein_id=WP_152536618.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2487076 2487285 . + . ID=gene-LPH58_RS10535;Name=LPH58_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10535;old_locus_tag=LPH58_10535 NZ_CP087690.1 GeneMarkS-2+ CDS 2487076 2487285 . + 0 ID=cds-WP_038271266.1;Parent=gene-LPH58_RS10535;Dbxref=Genbank:WP_038271266.1;Name=WP_038271266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10535;product=hypothetical protein;protein_id=WP_038271266.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2487349 2487648 . + . ID=gene-LPH58_RS10540;Name=LPH58_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10540;old_locus_tag=LPH58_10540 NZ_CP087690.1 GeneMarkS-2+ CDS 2487349 2487648 . + 0 ID=cds-WP_051482316.1;Parent=gene-LPH58_RS10540;Dbxref=Genbank:WP_051482316.1;Name=WP_051482316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10540;product=hypothetical protein;protein_id=WP_051482316.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2488249 2490099 . + . ID=gene-LPH58_RS10545;Name=LPH58_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10545;old_locus_tag=LPH58_10545 NZ_CP087690.1 Protein Homology CDS 2488249 2490099 . + 0 ID=cds-WP_038271265.1;Parent=gene-LPH58_RS10545;Dbxref=Genbank:WP_038271265.1;Name=WP_038271265.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024573.2;locus_tag=LPH58_RS10545;product=ATP-binding protein;protein_id=WP_038271265.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2490261 2490482 . + . ID=gene-LPH58_RS10550;Name=LPH58_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10550;old_locus_tag=LPH58_10550 NZ_CP087690.1 GeneMarkS-2+ CDS 2490261 2490482 . + 0 ID=cds-WP_152536617.1;Parent=gene-LPH58_RS10550;Dbxref=Genbank:WP_152536617.1;Name=WP_152536617.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10550;product=hypothetical protein;protein_id=WP_152536617.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2490501 2490874 . + . ID=gene-LPH58_RS10555;Name=LPH58_RS10555;end_range=2490874,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS10555;old_locus_tag=LPH58_10555;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 2490501 2490874 . + 0 ID=cds-LPH58_RS10555;Parent=gene-LPH58_RS10555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2490874,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1;locus_tag=LPH58_RS10555;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2491340 2492098 . + . ID=gene-LPH58_RS10560;Name=LPH58_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10560;old_locus_tag=LPH58_10560 NZ_CP087690.1 Protein Homology CDS 2491340 2492098 . + 0 ID=cds-WP_038271262.1;Parent=gene-LPH58_RS10560;Dbxref=Genbank:WP_038271262.1;Name=WP_038271262.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012707.2;locus_tag=LPH58_RS10560;product=transporter substrate-binding domain-containing protein;protein_id=WP_038271262.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2492124 2492819 . + . ID=gene-LPH58_RS10565;Name=LPH58_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10565;old_locus_tag=LPH58_10565 NZ_CP087690.1 Protein Homology CDS 2492124 2492819 . + 0 ID=cds-WP_038271261.1;Parent=gene-LPH58_RS10565;Dbxref=Genbank:WP_038271261.1;Name=WP_038271261.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LPH58_RS10565;product=amino acid ABC transporter permease;protein_id=WP_038271261.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2492797 2493516 . + . ID=gene-LPH58_RS10570;Name=LPH58_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10570;old_locus_tag=LPH58_10570 NZ_CP087690.1 Protein Homology CDS 2492797 2493516 . + 0 ID=cds-WP_038271260.1;Parent=gene-LPH58_RS10570;Dbxref=Genbank:WP_038271260.1;Name=WP_038271260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.2;locus_tag=LPH58_RS10570;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_038271260.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2493523 2494188 . + . ID=gene-LPH58_RS10575;Name=LPH58_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10575;old_locus_tag=LPH58_10575 NZ_CP087690.1 Protein Homology CDS 2493523 2494188 . + 0 ID=cds-WP_038271259.1;Parent=gene-LPH58_RS10575;Dbxref=Genbank:WP_038271259.1;Name=WP_038271259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012738.2;locus_tag=LPH58_RS10575;product=amino acid ABC transporter permease;protein_id=WP_038271259.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2494175 2494474 . - . ID=gene-LPH58_RS10580;Name=LPH58_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10580;old_locus_tag=LPH58_10580 NZ_CP087690.1 Protein Homology CDS 2494175 2494474 . - 0 ID=cds-WP_230428301.1;Parent=gene-LPH58_RS10580;Dbxref=Genbank:WP_230428301.1;Name=WP_230428301.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=LPH58_RS10580;product=UvrD-helicase domain-containing protein;protein_id=WP_230428301.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2494779 2495021 . - . ID=gene-LPH58_RS10585;Name=LPH58_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10585;old_locus_tag=LPH58_10585 NZ_CP087690.1 Protein Homology CDS 2494779 2495021 . - 0 ID=cds-WP_051482315.1;Parent=gene-LPH58_RS10585;Dbxref=Genbank:WP_051482315.1;Name=WP_051482315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.2;locus_tag=LPH58_RS10585;product=AAA family ATPase;protein_id=WP_051482315.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2495724 2496320 . - . ID=gene-LPH58_RS10590;Name=LPH58_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10590;old_locus_tag=LPH58_10590 NZ_CP087690.1 Protein Homology CDS 2495724 2496320 . - 0 ID=cds-WP_038271287.1;Parent=gene-LPH58_RS10590;Dbxref=Genbank:WP_038271287.1;Name=WP_038271287.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895080.1;locus_tag=LPH58_RS10590;product=YhgN family NAAT transporter;protein_id=WP_038271287.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2496984 2497304 . - . ID=gene-LPH58_RS10595;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LPH58_RS10595;old_locus_tag=LPH58_10595 NZ_CP087690.1 Protein Homology CDS 2496984 2497304 . - 0 ID=cds-WP_038271257.1;Parent=gene-LPH58_RS10595;Dbxref=Genbank:WP_038271257.1;Name=WP_038271257.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485599.1;locus_tag=LPH58_RS10595;product=Grx4 family monothiol glutaredoxin;protein_id=WP_038271257.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2498001 2499185 . - . ID=gene-LPH58_RS10600;Name=LPH58_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10600;old_locus_tag=LPH58_10600 NZ_CP087690.1 Protein Homology CDS 2498001 2499185 . - 0 ID=cds-WP_038271256.1;Parent=gene-LPH58_RS10600;Dbxref=Genbank:WP_038271256.1;Name=WP_038271256.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852058.1;locus_tag=LPH58_RS10600;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_038271256.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2499182 2499685 . - . ID=gene-LPH58_RS10605;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LPH58_RS10605;old_locus_tag=LPH58_10605 NZ_CP087690.1 Protein Homology CDS 2499182 2499685 . - 0 ID=cds-WP_038271255.1;Parent=gene-LPH58_RS10605;Dbxref=Genbank:WP_038271255.1;Name=WP_038271255.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003468225.1;locus_tag=LPH58_RS10605;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_038271255.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2499748 2500017 . + . ID=gene-LPH58_RS10610;Name=LPH58_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10610;old_locus_tag=LPH58_10610 NZ_CP087690.1 Protein Homology CDS 2499748 2500017 . + 0 ID=cds-WP_038271254.1;Parent=gene-LPH58_RS10610;Dbxref=Genbank:WP_038271254.1;Name=WP_038271254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008570984.1;locus_tag=LPH58_RS10610;product=Trm112 family protein;protein_id=WP_038271254.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2500778 2501845 . + . ID=gene-LPH58_RS10615;Name=LPH58_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10615;old_locus_tag=LPH58_10615 NZ_CP087690.1 Protein Homology CDS 2500778 2501845 . + 0 ID=cds-WP_081755437.1;Parent=gene-LPH58_RS10615;Dbxref=Genbank:WP_081755437.1;Name=WP_081755437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895089.1;locus_tag=LPH58_RS10615;product=DUF2272 domain-containing protein;protein_id=WP_081755437.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2502671 2502958 . + . ID=gene-LPH58_RS10620;Name=LPH58_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10620;old_locus_tag=LPH58_10620 NZ_CP087690.1 GeneMarkS-2+ CDS 2502671 2502958 . + 0 ID=cds-WP_051482314.1;Parent=gene-LPH58_RS10620;Dbxref=Genbank:WP_051482314.1;Name=WP_051482314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10620;product=hypothetical protein;protein_id=WP_051482314.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2504199 2506433 . - . ID=gene-LPH58_RS10625;Name=LPH58_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10625;old_locus_tag=LPH58_10625 NZ_CP087690.1 Protein Homology CDS 2504199 2506433 . - 0 ID=cds-WP_230428249.1;Parent=gene-LPH58_RS10625;Dbxref=Genbank:WP_230428249.1;Name=WP_230428249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087420.1;locus_tag=LPH58_RS10625;product=multicopper oxidase family protein;protein_id=WP_230428249.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2508346 2509719 . - . ID=gene-LPH58_RS10630;Name=LPH58_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10630;old_locus_tag=LPH58_10630 NZ_CP087690.1 Protein Homology CDS 2508346 2509719 . - 0 ID=cds-WP_038271253.1;Parent=gene-LPH58_RS10630;Dbxref=Genbank:WP_038271253.1;Name=WP_038271253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895093.1;locus_tag=LPH58_RS10630;product=virulence factor family protein;protein_id=WP_038271253.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2511701 2513677 . - . ID=gene-LPH58_RS10635;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=LPH58_RS10635;old_locus_tag=LPH58_10635 NZ_CP087690.1 Protein Homology CDS 2511701 2513677 . - 0 ID=cds-WP_038271284.1;Parent=gene-LPH58_RS10635;Dbxref=Genbank:WP_038271284.1;Name=WP_038271284.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091509.1;locus_tag=LPH58_RS10635;product=DNA helicase Rep;protein_id=WP_038271284.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2514187 2514399 . + . ID=gene-LPH58_RS10640;Name=LPH58_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10640;old_locus_tag=LPH58_10640 NZ_CP087690.1 GeneMarkS-2+ CDS 2514187 2514399 . + 0 ID=cds-WP_152536616.1;Parent=gene-LPH58_RS10640;Dbxref=Genbank:WP_152536616.1;Name=WP_152536616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10640;product=hypothetical protein;protein_id=WP_152536616.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2514612 2516219 . - . ID=gene-LPH58_RS10645;Name=LPH58_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10645;old_locus_tag=LPH58_10645 NZ_CP087690.1 Protein Homology CDS 2514612 2516219 . - 0 ID=cds-WP_038271252.1;Parent=gene-LPH58_RS10645;Dbxref=Genbank:WP_038271252.1;Name=WP_038271252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014091511.1;locus_tag=LPH58_RS10645;product=glucan biosynthesis protein;protein_id=WP_038271252.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2517160 2519061 . - . ID=gene-LPH58_RS10650;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=LPH58_RS10650;old_locus_tag=LPH58_10650 NZ_CP087690.1 Protein Homology CDS 2517160 2519061 . - 0 ID=cds-WP_038271251.1;Parent=gene-LPH58_RS10650;Dbxref=Genbank:WP_038271251.1;Name=WP_038271251.1;Ontology_term=GO:0006465,GO:0006508,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087426.1;locus_tag=LPH58_RS10650;product=signal peptide peptidase SppA;protein_id=WP_038271251.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2519145 2520506 . - . ID=gene-LPH58_RS10655;Name=LPH58_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10655;old_locus_tag=LPH58_10655 NZ_CP087690.1 Protein Homology CDS 2519145 2520506 . - 0 ID=cds-WP_038271250.1;Parent=gene-LPH58_RS10655;Dbxref=Genbank:WP_038271250.1;Name=WP_038271250.1;Ontology_term=GO:0006855,GO:0009410,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087427.1;locus_tag=LPH58_RS10655;product=MATE family efflux transporter;protein_id=WP_038271250.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2520865 2521335 . - . ID=gene-LPH58_RS10660;Name=LPH58_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10660;old_locus_tag=LPH58_10660 NZ_CP087690.1 Protein Homology CDS 2520865 2521335 . - 0 ID=cds-WP_230428250.1;Parent=gene-LPH58_RS10660;Dbxref=Genbank:WP_230428250.1;Name=WP_230428250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895101.1;locus_tag=LPH58_RS10660;product=DUF3106 domain-containing protein;protein_id=WP_230428250.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2521431 2522390 . - . ID=gene-LPH58_RS10665;Name=LPH58_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10665;old_locus_tag=LPH58_10665 NZ_CP087690.1 Protein Homology CDS 2521431 2522390 . - 0 ID=cds-WP_038271248.1;Parent=gene-LPH58_RS10665;Dbxref=Genbank:WP_038271248.1;Name=WP_038271248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087429.1;locus_tag=LPH58_RS10665;product=hypothetical protein;protein_id=WP_038271248.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2522828 2525020 . + . ID=gene-LPH58_RS10670;Name=LPH58_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10670;old_locus_tag=LPH58_10670 NZ_CP087690.1 Protein Homology CDS 2522828 2525020 . + 0 ID=cds-WP_038271247.1;Parent=gene-LPH58_RS10670;Dbxref=Genbank:WP_038271247.1;Name=WP_038271247.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017167545.1;locus_tag=LPH58_RS10670;product=primosomal protein N';protein_id=WP_038271247.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2525960 2526826 . - . ID=gene-LPH58_RS10675;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LPH58_RS10675;old_locus_tag=LPH58_10675 NZ_CP087690.1 Protein Homology CDS 2525960 2526826 . - 0 ID=cds-WP_038271246.1;Parent=gene-LPH58_RS10675;Dbxref=Genbank:WP_038271246.1;Name=WP_038271246.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoH;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002803651.1;locus_tag=LPH58_RS10675;product=RNA polymerase sigma factor RpoH;protein_id=WP_038271246.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2526970 2527710 . - . ID=gene-LPH58_RS10680;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=LPH58_RS10680;old_locus_tag=LPH58_10680 NZ_CP087690.1 Protein Homology CDS 2526970 2527710 . - 0 ID=cds-WP_038271245.1;Parent=gene-LPH58_RS10680;Dbxref=Genbank:WP_038271245.1;Name=WP_038271245.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157034.1;locus_tag=LPH58_RS10680;product=uracil-DNA glycosylase;protein_id=WP_038271245.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2527716 2528564 . - . ID=gene-LPH58_RS10685;Name=LPH58_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10685;old_locus_tag=LPH58_10685 NZ_CP087690.1 Protein Homology CDS 2527716 2528564 . - 0 ID=cds-WP_038271244.1;Parent=gene-LPH58_RS10685;Dbxref=Genbank:WP_038271244.1;Name=WP_038271244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852754.1;locus_tag=LPH58_RS10685;product=response regulator;protein_id=WP_038271244.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2528579 2529517 . - . ID=gene-LPH58_RS10690;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=LPH58_RS10690;old_locus_tag=LPH58_10690 NZ_CP087690.1 Protein Homology CDS 2528579 2529517 . - 0 ID=cds-WP_038271243.1;Parent=gene-LPH58_RS10690;Dbxref=Genbank:WP_038271243.1;Name=WP_038271243.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484495.1;locus_tag=LPH58_RS10690;product=permease-like cell division protein FtsX;protein_id=WP_038271243.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2529514 2530200 . - . ID=gene-LPH58_RS10695;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=LPH58_RS10695;old_locus_tag=LPH58_10695 NZ_CP087690.1 Protein Homology CDS 2529514 2530200 . - 0 ID=cds-WP_038271242.1;Parent=gene-LPH58_RS10695;Dbxref=Genbank:WP_038271242.1;Name=WP_038271242.1;Ontology_term=GO:0000910,GO:0006810,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA,transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003484499.1;locus_tag=LPH58_RS10695;product=cell division ATP-binding protein FtsE;protein_id=WP_038271242.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2530274 2531926 . - . ID=gene-LPH58_RS10700;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=LPH58_RS10700;old_locus_tag=LPH58_10700 NZ_CP087690.1 Protein Homology CDS 2530274 2531926 . - 0 ID=cds-WP_038271241.1;Parent=gene-LPH58_RS10700;Dbxref=Genbank:WP_038271241.1;Name=WP_038271241.1;gbkey=CDS;gene=rhlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337155.1;locus_tag=LPH58_RS10700;product=ATP-dependent RNA helicase RhlB;protein_id=WP_038271241.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2532124 2532465 . + . ID=gene-LPH58_RS10705;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LPH58_RS10705;old_locus_tag=LPH58_10705 NZ_CP087690.1 Protein Homology CDS 2532124 2532465 . + 0 ID=cds-WP_038271240.1;Parent=gene-LPH58_RS10705;Dbxref=Genbank:WP_038271240.1;Name=WP_038271240.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852709.1;locus_tag=LPH58_RS10705;product=thioredoxin;protein_id=WP_038271240.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2532673 2534367 . + . ID=gene-LPH58_RS10710;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LPH58_RS10710;old_locus_tag=LPH58_10710 NZ_CP087690.1 Protein Homology CDS 2532673 2534367 . + 0 ID=cds-WP_038271239.1;Parent=gene-LPH58_RS10710;Dbxref=Genbank:WP_038271239.1;Name=WP_038271239.1;Ontology_term=GO:0006353,GO:0004386,GO:0008186;gbkey=CDS;gene=rho;go_function=helicase activity|0004386||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008266970.1;locus_tag=LPH58_RS10710;product=transcription termination factor Rho;protein_id=WP_038271239.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2535277 2537508 . - . ID=gene-LPH58_RS10715;Name=LPH58_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10715;old_locus_tag=LPH58_10715 NZ_CP087690.1 Protein Homology CDS 2535277 2537508 . - 0 ID=cds-WP_038271238.1;Parent=gene-LPH58_RS10715;Dbxref=Genbank:WP_038271238.1;Name=WP_038271238.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157024.1;locus_tag=LPH58_RS10715;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_038271238.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2539499 2540173 . + . ID=gene-LPH58_RS10720;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=LPH58_RS10720;old_locus_tag=LPH58_10720 NZ_CP087690.1 Protein Homology CDS 2539499 2540173 . + 0 ID=cds-WP_038271237.1;Parent=gene-LPH58_RS10720;Dbxref=Genbank:WP_038271237.1;Name=WP_038271237.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas5c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003465423.1;locus_tag=LPH58_RS10720;product=type I-C CRISPR-associated protein Cas5c;protein_id=WP_038271237.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2540170 2541981 . + . ID=gene-LPH58_RS10725;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=LPH58_RS10725;old_locus_tag=LPH58_10725 NZ_CP087690.1 Protein Homology CDS 2540170 2541981 . + 0 ID=cds-WP_038271236.1;Parent=gene-LPH58_RS10725;Dbxref=Genbank:WP_038271236.1;Name=WP_038271236.1;Ontology_term=GO:0043571,GO:0003674,GO:0005575;gbkey=CDS;gene=cas8c;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017119023.1;locus_tag=LPH58_RS10725;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_038271236.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2541978 2542844 . + . ID=gene-LPH58_RS10730;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=LPH58_RS10730;old_locus_tag=LPH58_10730 NZ_CP087690.1 Protein Homology CDS 2541978 2542844 . + 0 ID=cds-WP_038271235.1;Parent=gene-LPH58_RS10730;Dbxref=Genbank:WP_038271235.1;Name=WP_038271235.1;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=cas7c;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010372412.1;locus_tag=LPH58_RS10730;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_038271235.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2545955 2547409 . - . ID=gene-LPH58_RS10735;Name=LPH58_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10735;old_locus_tag=LPH58_10735 NZ_CP087690.1 Protein Homology CDS 2545955 2547409 . - 0 ID=cds-WP_038271234.1;Parent=gene-LPH58_RS10735;Dbxref=Genbank:WP_038271234.1;Name=WP_038271234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084798.1;locus_tag=LPH58_RS10735;product=S41 family peptidase;protein_id=WP_038271234.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2547560 2548870 . - . ID=gene-LPH58_RS10740;Name=LPH58_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10740;old_locus_tag=LPH58_10740 NZ_CP087690.1 Protein Homology CDS 2547560 2548870 . - 0 ID=cds-WP_038271283.1;Parent=gene-LPH58_RS10740;Dbxref=Genbank:WP_038271283.1;Name=WP_038271283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084799.1;locus_tag=LPH58_RS10740;product=murein hydrolase activator EnvC;protein_id=WP_038271283.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2549068 2550789 . + . ID=gene-LPH58_RS10745;Name=LPH58_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10745;old_locus_tag=LPH58_10745 NZ_CP087690.1 Protein Homology CDS 2549068 2550789 . + 0 ID=cds-WP_038271233.1;Parent=gene-LPH58_RS10745;Dbxref=Genbank:WP_038271233.1;Name=WP_038271233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098351.1;locus_tag=LPH58_RS10745;product=M28 family peptidase;protein_id=WP_038271233.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2552080 2553198 . + . ID=gene-LPH58_RS10750;Name=LPH58_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10750;old_locus_tag=LPH58_10750 NZ_CP087690.1 Protein Homology CDS 2552080 2553198 . + 0 ID=cds-WP_081755436.1;Parent=gene-LPH58_RS10750;Dbxref=Genbank:WP_081755436.1;Name=WP_081755436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020853012.1;locus_tag=LPH58_RS10750;product=glycoside hydrolase family 5 protein;protein_id=WP_081755436.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2554115 2554351 . + . ID=gene-LPH58_RS10755;Name=LPH58_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10755;old_locus_tag=LPH58_10755 NZ_CP087690.1 GeneMarkS-2+ CDS 2554115 2554351 . + 0 ID=cds-WP_230428251.1;Parent=gene-LPH58_RS10755;Dbxref=Genbank:WP_230428251.1;Name=WP_230428251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10755;product=hypothetical protein;protein_id=WP_230428251.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2554468 2554610 . + . ID=gene-LPH58_RS10760;Name=LPH58_RS10760;end_range=2554610,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS10760;old_locus_tag=LPH58_10760;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 2554468 2554610 . + 0 ID=cds-LPH58_RS10760;Parent=gene-LPH58_RS10760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2554610,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558164.1;locus_tag=LPH58_RS10760;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2554742 2554930 . + . ID=gene-LPH58_RS10765;Name=LPH58_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10765;old_locus_tag=LPH58_10765 NZ_CP087690.1 GeneMarkS-2+ CDS 2554742 2554930 . + 0 ID=cds-WP_152536615.1;Parent=gene-LPH58_RS10765;Dbxref=Genbank:WP_152536615.1;Name=WP_152536615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10765;product=hypothetical protein;protein_id=WP_152536615.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2555460 2556944 . - . ID=gene-LPH58_RS10770;Name=LPH58_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10770;old_locus_tag=LPH58_10770 NZ_CP087690.1 Protein Homology CDS 2555460 2556944 . - 0 ID=cds-WP_038271230.1;Parent=gene-LPH58_RS10770;Dbxref=Genbank:WP_038271230.1;Name=WP_038271230.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098354.1;locus_tag=LPH58_RS10770;product=FAD-dependent oxidoreductase;protein_id=WP_038271230.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2557083 2561552 . - . ID=gene-LPH58_RS10775;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=LPH58_RS10775;old_locus_tag=LPH58_10775 NZ_CP087690.1 Protein Homology CDS 2557083 2561552 . - 0 ID=cds-WP_038271229.1;Parent=gene-LPH58_RS10775;Dbxref=Genbank:WP_038271229.1;Name=WP_038271229.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087485.1;locus_tag=LPH58_RS10775;product=glutamate synthase large subunit;protein_id=WP_038271229.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2562174 2562317 . - . ID=gene-LPH58_RS10780;Name=LPH58_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10780;old_locus_tag=LPH58_10780 NZ_CP087690.1 GeneMarkS-2+ CDS 2562174 2562317 . - 0 ID=cds-WP_160165173.1;Parent=gene-LPH58_RS10780;Dbxref=Genbank:WP_160165173.1;Name=WP_160165173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10780;product=hypothetical protein;protein_id=WP_160165173.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2562488 2563342 . + . ID=gene-LPH58_RS10785;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LPH58_RS10785;old_locus_tag=LPH58_10785 NZ_CP087690.1 Protein Homology CDS 2562488 2563342 . + 0 ID=cds-WP_038271228.1;Parent=gene-LPH58_RS10785;Dbxref=Genbank:WP_038271228.1;Name=WP_038271228.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087478.1;locus_tag=LPH58_RS10785;product=pyrroline-5-carboxylate reductase;protein_id=WP_038271228.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2564468 2567074 . + . ID=gene-LPH58_RS10790;Name=LPH58_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10790;old_locus_tag=LPH58_10790 NZ_CP087690.1 Protein Homology CDS 2564468 2567074 . + 0 ID=cds-WP_114867192.1;Parent=gene-LPH58_RS10790;Dbxref=Genbank:WP_114867192.1;Name=WP_114867192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017164668.1;locus_tag=LPH58_RS10790;product=TonB-dependent receptor;protein_id=WP_114867192.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2567168 2569015 . + . ID=gene-LPH58_RS10795;Name=LPH58_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10795;old_locus_tag=LPH58_10795 NZ_CP087690.1 Protein Homology CDS 2567168 2569015 . + 0 ID=cds-WP_038271227.1;Parent=gene-LPH58_RS10795;Dbxref=Genbank:WP_038271227.1;Name=WP_038271227.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338135.1;locus_tag=LPH58_RS10795;product=alpha-L-fucosidase;protein_id=WP_038271227.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2569929 2570281 . + . ID=gene-LPH58_RS10800;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LPH58_RS10800;old_locus_tag=LPH58_10800 NZ_CP087690.1 cmsearch tmRNA 2569929 2570281 . + . ID=rna-LPH58_RS10800;Parent=gene-LPH58_RS10800;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS10800;product=transfer-messenger RNA NZ_CP087690.1 cmsearch exon 2569929 2570281 . + . ID=exon-LPH58_RS10800-1;Parent=rna-LPH58_RS10800;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=LPH58_RS10800;product=transfer-messenger RNA NZ_CP087690.1 RefSeq gene 2570654 2571187 . - . ID=gene-LPH58_RS10805;Name=LPH58_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10805;old_locus_tag=LPH58_10805 NZ_CP087690.1 GeneMarkS-2+ CDS 2570654 2571187 . - 0 ID=cds-WP_038271225.1;Parent=gene-LPH58_RS10805;Dbxref=Genbank:WP_038271225.1;Name=WP_038271225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10805;product=hypothetical protein;protein_id=WP_038271225.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2571184 2571498 . - . ID=gene-LPH58_RS10810;Name=LPH58_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10810;old_locus_tag=LPH58_10810 NZ_CP087690.1 GeneMarkS-2+ CDS 2571184 2571498 . - 0 ID=cds-WP_038271281.1;Parent=gene-LPH58_RS10810;Dbxref=Genbank:WP_038271281.1;Name=WP_038271281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10810;product=hypothetical protein;protein_id=WP_038271281.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2571668 2572054 . - . ID=gene-LPH58_RS10815;Name=LPH58_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10815;old_locus_tag=LPH58_10815 NZ_CP087690.1 Protein Homology CDS 2571668 2572054 . - 0 ID=cds-WP_038271280.1;Parent=gene-LPH58_RS10815;Dbxref=Genbank:WP_038271280.1;Name=WP_038271280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004086150.1;locus_tag=LPH58_RS10815;product=DUF596 domain-containing protein;protein_id=WP_038271280.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2572066 2572419 . - . ID=gene-LPH58_RS10820;Name=LPH58_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10820;old_locus_tag=LPH58_10820 NZ_CP087690.1 Protein Homology CDS 2572066 2572419 . - 0 ID=cds-WP_051482311.1;Parent=gene-LPH58_RS10820;Dbxref=Genbank:WP_051482311.1;Name=WP_051482311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090789.1;locus_tag=LPH58_RS10820;product=DUF769 domain-containing protein;protein_id=WP_051482311.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2572499 2572875 . - . ID=gene-LPH58_RS10825;Name=LPH58_RS10825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS10825;old_locus_tag=LPH58_10825;pseudo=true NZ_CP087690.1 Protein Homology CDS 2572499 2572875 . - 0 ID=cds-LPH58_RS10825;Parent=gene-LPH58_RS10825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382790.1;locus_tag=LPH58_RS10825;product=DUF596 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2572887 2573216 . - . ID=gene-LPH58_RS10830;Name=LPH58_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10830;old_locus_tag=LPH58_10830 NZ_CP087690.1 Protein Homology CDS 2572887 2573216 . - 0 ID=cds-WP_038271224.1;Parent=gene-LPH58_RS10830;Dbxref=Genbank:WP_038271224.1;Name=WP_038271224.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH58_RS10830;product=DUF769 domain-containing protein;protein_id=WP_038271224.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2573281 2573703 . - . ID=gene-LPH58_RS10835;Name=LPH58_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10835;old_locus_tag=LPH58_10835 NZ_CP087690.1 GeneMarkS-2+ CDS 2573281 2573703 . - 0 ID=cds-WP_038271223.1;Parent=gene-LPH58_RS10835;Dbxref=Genbank:WP_038271223.1;Name=WP_038271223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10835;product=hypothetical protein;protein_id=WP_038271223.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2573700 2574875 . - . ID=gene-LPH58_RS10840;Name=LPH58_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10840;old_locus_tag=LPH58_10840 NZ_CP087690.1 Protein Homology CDS 2573700 2574875 . - 0 ID=cds-WP_205395219.1;Parent=gene-LPH58_RS10840;Dbxref=Genbank:WP_205395219.1;Name=WP_205395219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH58_RS10840;product=DNA/RNA non-specific endonuclease;protein_id=WP_205395219.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2575310 2575699 . - . ID=gene-LPH58_RS10845;Name=LPH58_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10845;old_locus_tag=LPH58_10845 NZ_CP087690.1 Protein Homology CDS 2575310 2575699 . - 0 ID=cds-WP_038273210.1;Parent=gene-LPH58_RS10845;Dbxref=Genbank:WP_038273210.1;Name=WP_038273210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS10845;product=DUF596 domain-containing protein;protein_id=WP_038273210.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2575711 2575965 . - . ID=gene-LPH58_RS10850;Name=LPH58_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10850;old_locus_tag=LPH58_10850 NZ_CP087690.1 Protein Homology CDS 2575711 2575965 . - 0 ID=cds-WP_230428252.1;Parent=gene-LPH58_RS10850;Dbxref=Genbank:WP_230428252.1;Name=WP_230428252.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017408.2;locus_tag=LPH58_RS10850;product=hemagglutinin;protein_id=WP_230428252.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2576209 2576607 . - . ID=gene-LPH58_RS10855;Name=LPH58_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10855;old_locus_tag=LPH58_10855 NZ_CP087690.1 Protein Homology CDS 2576209 2576607 . - 0 ID=cds-WP_038273203.1;Parent=gene-LPH58_RS10855;Dbxref=Genbank:WP_038273203.1;Name=WP_038273203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004089371.1;locus_tag=LPH58_RS10855;product=DUF596 domain-containing protein;protein_id=WP_038273203.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2576619 2577752 . - . ID=gene-LPH58_RS10860;Name=LPH58_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10860;old_locus_tag=LPH58_10860 NZ_CP087690.1 Protein Homology CDS 2576619 2577752 . - 0 ID=cds-WP_114867194.1;Parent=gene-LPH58_RS10860;Dbxref=Genbank:WP_114867194.1;Name=WP_114867194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382788.1;locus_tag=LPH58_RS10860;product=DUF769 domain-containing protein;protein_id=WP_114867194.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2577906 2578463 . - . ID=gene-LPH58_RS10865;Name=LPH58_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10865;old_locus_tag=LPH58_10865 NZ_CP087690.1 GeneMarkS-2+ CDS 2577906 2578463 . - 0 ID=cds-WP_038273296.1;Parent=gene-LPH58_RS10865;Dbxref=Genbank:WP_038273296.1;Name=WP_038273296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10865;product=hypothetical protein;protein_id=WP_038273296.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2578460 2588137 . - . ID=gene-LPH58_RS10870;Name=LPH58_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10870;old_locus_tag=LPH58_10870 NZ_CP087690.1 Protein Homology CDS 2578460 2588137 . - 0 ID=cds-WP_171898066.1;Parent=gene-LPH58_RS10870;Dbxref=Genbank:WP_171898066.1;Name=WP_171898066.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.2;locus_tag=LPH58_RS10870;product=hemagglutinin repeat-containing protein;protein_id=WP_171898066.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2588097 2589467 . - . ID=gene-LPH58_RS10875;Name=LPH58_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10875;old_locus_tag=LPH58_10875 NZ_CP087690.1 Protein Homology CDS 2588097 2589467 . - 0 ID=cds-WP_114867153.1-3;Parent=gene-LPH58_RS10875;Dbxref=Genbank:WP_114867153.1;Name=WP_114867153.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.2;locus_tag=LPH58_RS10875;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_114867153.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2589989 2590315 . + . ID=gene-LPH58_RS10880;Name=LPH58_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10880;old_locus_tag=LPH58_10880 NZ_CP087690.1 GeneMarkS-2+ CDS 2589989 2590315 . + 0 ID=cds-WP_201745751.1;Parent=gene-LPH58_RS10880;Dbxref=Genbank:WP_201745751.1;Name=WP_201745751.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10880;product=hypothetical protein;protein_id=WP_201745751.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2590341 2591261 . - . ID=gene-LPH58_RS10885;Name=LPH58_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10885;old_locus_tag=LPH58_10885 NZ_CP087690.1 GeneMarkS-2+ CDS 2590341 2591261 . - 0 ID=cds-WP_160165228.1;Parent=gene-LPH58_RS10885;Dbxref=Genbank:WP_160165228.1;Name=WP_160165228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10885;product=hypothetical protein;protein_id=WP_160165228.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2591147 2591671 . - . ID=gene-LPH58_RS10890;Name=LPH58_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10890;old_locus_tag=LPH58_10890 NZ_CP087690.1 GeneMarkS-2+ CDS 2591147 2591671 . - 0 ID=cds-WP_162814109.1;Parent=gene-LPH58_RS10890;Dbxref=Genbank:WP_162814109.1;Name=WP_162814109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10890;product=hypothetical protein;protein_id=WP_162814109.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2591668 2591805 . - . ID=gene-LPH58_RS10895;Name=LPH58_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10895;old_locus_tag=LPH58_10895 NZ_CP087690.1 GeneMarkS-2+ CDS 2591668 2591805 . - 0 ID=cds-WP_160199320.1;Parent=gene-LPH58_RS10895;Dbxref=Genbank:WP_160199320.1;Name=WP_160199320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10895;product=hypothetical protein;protein_id=WP_160199320.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2592118 2593065 . - . ID=gene-LPH58_RS10900;Name=LPH58_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10900;old_locus_tag=LPH58_10900 NZ_CP087690.1 Protein Homology CDS 2592118 2593065 . - 0 ID=cds-WP_038272973.1;Parent=gene-LPH58_RS10900;Dbxref=Genbank:WP_038272973.1;Name=WP_038272973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087430.1;locus_tag=LPH58_RS10900;product=COG2958 family protein;protein_id=WP_038272973.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2593077 2593301 . - . ID=gene-LPH58_RS10905;Name=LPH58_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10905;old_locus_tag=LPH58_10905 NZ_CP087690.1 GeneMarkS-2+ CDS 2593077 2593301 . - 0 ID=cds-WP_152536668.1;Parent=gene-LPH58_RS10905;Dbxref=Genbank:WP_152536668.1;Name=WP_152536668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10905;product=hypothetical protein;protein_id=WP_152536668.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2593937 2594308 . - . ID=gene-LPH58_RS10910;Name=LPH58_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10910;old_locus_tag=LPH58_10910 NZ_CP087690.1 GeneMarkS-2+ CDS 2593937 2594308 . - 0 ID=cds-WP_200866219.1;Parent=gene-LPH58_RS10910;Dbxref=Genbank:WP_200866219.1;Name=WP_200866219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10910;product=hypothetical protein;protein_id=WP_200866219.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2594353 2597376 . - . ID=gene-LPH58_RS10915;Name=LPH58_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10915;old_locus_tag=LPH58_10915 NZ_CP087690.1 Protein Homology CDS 2594353 2597376 . - 0 ID=cds-WP_038272980.1;Parent=gene-LPH58_RS10915;Dbxref=Genbank:WP_038272980.1;Name=WP_038272980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085623.1;locus_tag=LPH58_RS10915;product=type I restriction endonuclease subunit R;protein_id=WP_038272980.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2597373 2598545 . - . ID=gene-LPH58_RS10920;Name=LPH58_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10920;old_locus_tag=LPH58_10920 NZ_CP087690.1 Protein Homology CDS 2597373 2598545 . - 0 ID=cds-WP_038272982.1;Parent=gene-LPH58_RS10920;Dbxref=Genbank:WP_038272982.1;Name=WP_038272982.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895140.1;locus_tag=LPH58_RS10920;product=restriction endonuclease subunit S;protein_id=WP_038272982.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2598548 2598793 . - . ID=gene-LPH58_RS10925;Name=LPH58_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10925;old_locus_tag=LPH58_10925 NZ_CP087690.1 GeneMarkS-2+ CDS 2598548 2598793 . - 0 ID=cds-WP_038272984.1;Parent=gene-LPH58_RS10925;Dbxref=Genbank:WP_038272984.1;Name=WP_038272984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10925;product=hypothetical protein;protein_id=WP_038272984.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2598790 2600370 . - . ID=gene-LPH58_RS10930;Name=LPH58_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10930;old_locus_tag=LPH58_10930 NZ_CP087690.1 Protein Homology CDS 2598790 2600370 . - 0 ID=cds-WP_038272985.1;Parent=gene-LPH58_RS10930;Dbxref=Genbank:WP_038272985.1;Name=WP_038272985.1;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852131.1;locus_tag=LPH58_RS10930;product=type I restriction-modification system subunit M;protein_id=WP_038272985.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2600415 2600741 . + . ID=gene-LPH58_RS10935;Name=LPH58_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10935;old_locus_tag=LPH58_10935 NZ_CP087690.1 GeneMarkS-2+ CDS 2600415 2600741 . + 0 ID=cds-WP_160165231.1;Parent=gene-LPH58_RS10935;Dbxref=Genbank:WP_160165231.1;Name=WP_160165231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10935;product=hypothetical protein;protein_id=WP_160165231.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2600763 2600960 . - . ID=gene-LPH58_RS10940;Name=LPH58_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10940;old_locus_tag=LPH58_10940 NZ_CP087690.1 GeneMarkS-2+ CDS 2600763 2600960 . - 0 ID=cds-WP_038272989.1;Parent=gene-LPH58_RS10940;Dbxref=Genbank:WP_038272989.1;Name=WP_038272989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10940;product=hypothetical protein;protein_id=WP_038272989.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2600969 2601424 . - . ID=gene-LPH58_RS10945;Name=LPH58_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10945;old_locus_tag=LPH58_10945 NZ_CP087690.1 GeneMarkS-2+ CDS 2600969 2601424 . - 0 ID=cds-WP_038272991.1;Parent=gene-LPH58_RS10945;Dbxref=Genbank:WP_038272991.1;Name=WP_038272991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10945;product=hypothetical protein;protein_id=WP_038272991.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2601602 2601808 . - . ID=gene-LPH58_RS10950;Name=LPH58_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10950;old_locus_tag=LPH58_10950 NZ_CP087690.1 GeneMarkS-2+ CDS 2601602 2601808 . - 0 ID=cds-WP_114867196.1;Parent=gene-LPH58_RS10950;Dbxref=Genbank:WP_114867196.1;Name=WP_114867196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10950;product=hypothetical protein;protein_id=WP_114867196.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2601805 2602011 . - . ID=gene-LPH58_RS10955;Name=LPH58_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10955;old_locus_tag=LPH58_10955 NZ_CP087690.1 GeneMarkS-2+ CDS 2601805 2602011 . - 0 ID=cds-WP_162814111.1;Parent=gene-LPH58_RS10955;Dbxref=Genbank:WP_162814111.1;Name=WP_162814111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10955;product=hypothetical protein;protein_id=WP_162814111.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2602046 2602234 . - . ID=gene-LPH58_RS10960;Name=LPH58_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10960;old_locus_tag=LPH58_10960 NZ_CP087690.1 GeneMarkS-2+ CDS 2602046 2602234 . - 0 ID=cds-WP_114867197.1;Parent=gene-LPH58_RS10960;Dbxref=Genbank:WP_114867197.1;Name=WP_114867197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10960;product=hypothetical protein;protein_id=WP_114867197.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2602461 2603084 . + . ID=gene-LPH58_RS10965;Name=LPH58_RS10965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS10965;old_locus_tag=LPH58_10965;pseudo=true NZ_CP087690.1 Protein Homology CDS 2602461 2603084 . + 0 ID=cds-LPH58_RS10965;Parent=gene-LPH58_RS10965;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021498.2;locus_tag=LPH58_RS10965;product=DUF2220 domain-containing protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2603491 2603670 . - . ID=gene-LPH58_RS10970;Name=LPH58_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10970;old_locus_tag=LPH58_10970 NZ_CP087690.1 GeneMarkS-2+ CDS 2603491 2603670 . - 0 ID=cds-WP_038273245.1;Parent=gene-LPH58_RS10970;Dbxref=Genbank:WP_038273245.1;Name=WP_038273245.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10970;product=hypothetical protein;protein_id=WP_038273245.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2603749 2604066 . - . ID=gene-LPH58_RS10975;Name=LPH58_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10975;old_locus_tag=LPH58_10975 NZ_CP087690.1 GeneMarkS-2+ CDS 2603749 2604066 . - 0 ID=cds-WP_160199317.1;Parent=gene-LPH58_RS10975;Dbxref=Genbank:WP_160199317.1;Name=WP_160199317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10975;product=hypothetical protein;protein_id=WP_160199317.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2604359 2604625 . + . ID=gene-LPH58_RS10980;Name=LPH58_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10980;old_locus_tag=LPH58_10980 NZ_CP087690.1 GeneMarkS-2+ CDS 2604359 2604625 . + 0 ID=cds-WP_152536660.1;Parent=gene-LPH58_RS10980;Dbxref=Genbank:WP_152536660.1;Name=WP_152536660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10980;product=hypothetical protein;protein_id=WP_152536660.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2604622 2604840 . + . ID=gene-LPH58_RS10985;Name=LPH58_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10985;old_locus_tag=LPH58_10985 NZ_CP087690.1 GeneMarkS-2+ CDS 2604622 2604840 . + 0 ID=cds-WP_038272773.1;Parent=gene-LPH58_RS10985;Dbxref=Genbank:WP_038272773.1;Name=WP_038272773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS10985;product=hypothetical protein;protein_id=WP_038272773.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2604858 2605670 . - . ID=gene-LPH58_RS10990;Name=LPH58_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10990;old_locus_tag=LPH58_10990 NZ_CP087690.1 Protein Homology CDS 2604858 2605670 . - 0 ID=cds-WP_038272775.1;Parent=gene-LPH58_RS10990;Dbxref=Genbank:WP_038272775.1;Name=WP_038272775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014899.2;locus_tag=LPH58_RS10990;product=class III extradiol ring-cleavage dioxygenase;protein_id=WP_038272775.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2605836 2605985 . - . ID=gene-LPH58_RS10995;Name=LPH58_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS10995;old_locus_tag=LPH58_10995 NZ_CP087690.1 Protein Homology CDS 2605836 2605985 . - 0 ID=cds-WP_230428254.1;Parent=gene-LPH58_RS10995;Dbxref=Genbank:WP_230428254.1;Name=WP_230428254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012464.2;locus_tag=LPH58_RS10995;product=hypothetical protein;protein_id=WP_230428254.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2605982 2606119 . - . ID=gene-LPH58_RS11000;Name=LPH58_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11000;old_locus_tag=LPH58_11000 NZ_CP087690.1 GeneMarkS-2+ CDS 2605982 2606119 . - 0 ID=cds-WP_230428255.1;Parent=gene-LPH58_RS11000;Dbxref=Genbank:WP_230428255.1;Name=WP_230428255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11000;product=hypothetical protein;protein_id=WP_230428255.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2606127 2606435 . - . ID=gene-LPH58_RS11005;Name=LPH58_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11005;old_locus_tag=LPH58_11005 NZ_CP087690.1 GeneMarkS-2+ CDS 2606127 2606435 . - 0 ID=cds-WP_038272777.1;Parent=gene-LPH58_RS11005;Dbxref=Genbank:WP_038272777.1;Name=WP_038272777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11005;product=hypothetical protein;protein_id=WP_038272777.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2606629 2607114 . + . ID=gene-LPH58_RS11010;Name=LPH58_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11010;old_locus_tag=LPH58_11010 NZ_CP087690.1 GeneMarkS-2+ CDS 2606629 2607114 . + 0 ID=cds-WP_038272779.1;Parent=gene-LPH58_RS11010;Dbxref=Genbank:WP_038272779.1;Name=WP_038272779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11010;product=hypothetical protein;protein_id=WP_038272779.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2607274 2610264 . - . ID=gene-LPH58_RS11015;Name=LPH58_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11015;old_locus_tag=LPH58_11015 NZ_CP087690.1 Protein Homology CDS 2607274 2610264 . - 0 ID=cds-WP_038272782.1;Parent=gene-LPH58_RS11015;Dbxref=Genbank:WP_038272782.1;Name=WP_038272782.1;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161163.1;locus_tag=LPH58_RS11015;product=HsdR family type I site-specific deoxyribonuclease;protein_id=WP_038272782.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2610267 2611421 . - . ID=gene-LPH58_RS11020;Name=LPH58_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11020;old_locus_tag=LPH58_11020 NZ_CP087690.1 Protein Homology CDS 2610267 2611421 . - 0 ID=cds-WP_081755486.1;Parent=gene-LPH58_RS11020;Dbxref=Genbank:WP_081755486.1;Name=WP_081755486.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=LPH58_RS11020;product=restriction endonuclease subunit S;protein_id=WP_081755486.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2611414 2612940 . - . ID=gene-LPH58_RS11025;Name=LPH58_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11025;old_locus_tag=LPH58_11025 NZ_CP087690.1 Protein Homology CDS 2611414 2612940 . - 0 ID=cds-WP_038272784.1;Parent=gene-LPH58_RS11025;Dbxref=Genbank:WP_038272784.1;Name=WP_038272784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161165.1;locus_tag=LPH58_RS11025;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_038272784.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2612937 2614439 . - . ID=gene-LPH58_RS11030;Name=LPH58_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11030;old_locus_tag=LPH58_11030 NZ_CP087690.1 Protein Homology CDS 2612937 2614439 . - 0 ID=cds-WP_038272787.1;Parent=gene-LPH58_RS11030;Dbxref=Genbank:WP_038272787.1;Name=WP_038272787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014161167.1;locus_tag=LPH58_RS11030;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_038272787.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2614508 2614657 . - . ID=gene-LPH58_RS11035;Name=LPH58_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11035;old_locus_tag=LPH58_11035 NZ_CP087690.1 GeneMarkS-2+ CDS 2614508 2614657 . - 0 ID=cds-WP_200866214.1;Parent=gene-LPH58_RS11035;Dbxref=Genbank:WP_200866214.1;Name=WP_200866214.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11035;product=hypothetical protein;protein_id=WP_200866214.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2615283 2616173 . + . ID=gene-LPH58_RS11040;Name=LPH58_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11040;old_locus_tag=LPH58_11040 NZ_CP087690.1 Protein Homology CDS 2615283 2616173 . + 0 ID=cds-WP_038272792.1;Parent=gene-LPH58_RS11040;Dbxref=Genbank:WP_038272792.1;Name=WP_038272792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085602.1;locus_tag=LPH58_RS11040;product=hypothetical protein;protein_id=WP_038272792.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2616313 2617183 . + . ID=gene-LPH58_RS11045;Name=LPH58_RS11045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11045;old_locus_tag=LPH58_11045;pseudo=true NZ_CP087690.1 Protein Homology CDS 2616313 2617183 . + 0 ID=cds-LPH58_RS11045;Parent=gene-LPH58_RS11045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085602.1;locus_tag=LPH58_RS11045;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2617347 2617811 . + . ID=gene-LPH58_RS11050;Name=LPH58_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11050;old_locus_tag=LPH58_11050 NZ_CP087690.1 Protein Homology CDS 2617347 2617811 . + 0 ID=cds-WP_038272801.1;Parent=gene-LPH58_RS11050;Dbxref=Genbank:WP_038272801.1;Name=WP_038272801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895168.1;locus_tag=LPH58_RS11050;product=hypothetical protein;protein_id=WP_038272801.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2617918 2618199 . + . ID=gene-LPH58_RS11055;Name=LPH58_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11055;old_locus_tag=LPH58_11055 NZ_CP087690.1 GeneMarkS-2+ CDS 2617918 2618199 . + 0 ID=cds-WP_230428256.1;Parent=gene-LPH58_RS11055;Dbxref=Genbank:WP_230428256.1;Name=WP_230428256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11055;product=hypothetical protein;protein_id=WP_230428256.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2618395 2618973 . + . ID=gene-LPH58_RS11060;Name=LPH58_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11060;old_locus_tag=LPH58_11060 NZ_CP087690.1 Protein Homology CDS 2618395 2618973 . + 0 ID=cds-WP_038272794.1;Parent=gene-LPH58_RS11060;Dbxref=Genbank:WP_038272794.1;Name=WP_038272794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085600.1;locus_tag=LPH58_RS11060;product=DUF5625 family protein;protein_id=WP_038272794.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2619130 2619594 . + . ID=gene-LPH58_RS11065;Name=LPH58_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11065;old_locus_tag=LPH58_11065 NZ_CP087690.1 Protein Homology CDS 2619130 2619594 . + 0 ID=cds-WP_038272796.1;Parent=gene-LPH58_RS11065;Dbxref=Genbank:WP_038272796.1;Name=WP_038272796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010895168.1;locus_tag=LPH58_RS11065;product=hypothetical protein;protein_id=WP_038272796.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2619615 2624096 . + . ID=gene-LPH58_RS11070;Name=LPH58_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11070;old_locus_tag=LPH58_11070 NZ_CP087690.1 Protein Homology CDS 2619615 2624096 . + 0 ID=cds-WP_114867199.1;Parent=gene-LPH58_RS11070;Dbxref=Genbank:WP_114867199.1;Name=WP_114867199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085599.1;locus_tag=LPH58_RS11070;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_114867199.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2625086 2625310 . + . ID=gene-LPH58_RS11085;Name=LPH58_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11085;old_locus_tag=LPH58_11085 NZ_CP087690.1 GeneMarkS-2+ CDS 2625086 2625310 . + 0 ID=cds-WP_152536561.1;Parent=gene-LPH58_RS11085;Dbxref=Genbank:WP_152536561.1;Name=WP_152536561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11085;product=hypothetical protein;protein_id=WP_152536561.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2626179 2626940 . - . ID=gene-LPH58_RS11090;Name=LPH58_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11090;old_locus_tag=LPH58_11090 NZ_CP087690.1 Protein Homology CDS 2626179 2626940 . - 0 ID=cds-WP_038269876.1;Parent=gene-LPH58_RS11090;Dbxref=Genbank:WP_038269876.1;Name=WP_038269876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005927840.1;locus_tag=LPH58_RS11090;product=Bax inhibitor-1/YccA family protein;protein_id=WP_038269876.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2627114 2627190 . + . ID=gene-LPH58_RS11095;Name=LPH58_RS11095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11095;old_locus_tag=LPH58_11095 NZ_CP087690.1 tRNAscan-SE tRNA 2627114 2627190 . + . ID=rna-LPH58_RS11095;Parent=gene-LPH58_RS11095;anticodon=(pos:2627148..2627150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11095;product=tRNA-Pro NZ_CP087690.1 tRNAscan-SE exon 2627114 2627190 . + . ID=exon-LPH58_RS11095-1;Parent=rna-LPH58_RS11095;anticodon=(pos:2627148..2627150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11095;product=tRNA-Pro NZ_CP087690.1 RefSeq gene 2627265 2627343 . + . ID=gene-LPH58_RS11100;Name=LPH58_RS11100;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11100;old_locus_tag=LPH58_11100 NZ_CP087690.1 tRNAscan-SE tRNA 2627265 2627343 . + . ID=rna-LPH58_RS11100;Parent=gene-LPH58_RS11100;anticodon=(pos:2627301..2627303);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11100;product=tRNA-Arg NZ_CP087690.1 tRNAscan-SE exon 2627265 2627343 . + . ID=exon-LPH58_RS11100-1;Parent=rna-LPH58_RS11100;anticodon=(pos:2627301..2627303);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11100;product=tRNA-Arg NZ_CP087690.1 RefSeq gene 2627383 2627459 . + . ID=gene-LPH58_RS11105;Name=LPH58_RS11105;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11105;old_locus_tag=LPH58_11105 NZ_CP087690.1 tRNAscan-SE tRNA 2627383 2627459 . + . ID=rna-LPH58_RS11105;Parent=gene-LPH58_RS11105;anticodon=(pos:2627417..2627419);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11105;product=tRNA-His NZ_CP087690.1 tRNAscan-SE exon 2627383 2627459 . + . ID=exon-LPH58_RS11105-1;Parent=rna-LPH58_RS11105;anticodon=(pos:2627417..2627419);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11105;product=tRNA-His NZ_CP087690.1 RefSeq gene 2627561 2627636 . + . ID=gene-LPH58_RS11110;Name=LPH58_RS11110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11110;old_locus_tag=LPH58_11110 NZ_CP087690.1 tRNAscan-SE tRNA 2627561 2627636 . + . ID=rna-LPH58_RS11110;Parent=gene-LPH58_RS11110;anticodon=(pos:2627594..2627596);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11110;product=tRNA-Lys NZ_CP087690.1 tRNAscan-SE exon 2627561 2627636 . + . ID=exon-LPH58_RS11110-1;Parent=rna-LPH58_RS11110;anticodon=(pos:2627594..2627596);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11110;product=tRNA-Lys NZ_CP087690.1 RefSeq gene 2627640 2627831 . - . ID=gene-LPH58_RS11115;Name=LPH58_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11115;old_locus_tag=LPH58_11115 NZ_CP087690.1 GeneMarkS-2+ CDS 2627640 2627831 . - 0 ID=cds-WP_038269875.1;Parent=gene-LPH58_RS11115;Dbxref=Genbank:WP_038269875.1;Name=WP_038269875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11115;product=hypothetical protein;protein_id=WP_038269875.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2628010 2628174 . + . ID=gene-LPH58_RS11120;Name=LPH58_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11120;old_locus_tag=LPH58_11120 NZ_CP087690.1 GeneMarkS-2+ CDS 2628010 2628174 . + 0 ID=cds-WP_160165113.1;Parent=gene-LPH58_RS11120;Dbxref=Genbank:WP_160165113.1;Name=WP_160165113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11120;product=hypothetical protein;protein_id=WP_160165113.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2628358 2628603 . - . ID=gene-LPH58_RS11125;Name=LPH58_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11125;old_locus_tag=LPH58_11125 NZ_CP087690.1 GeneMarkS-2+ CDS 2628358 2628603 . - 0 ID=cds-WP_152536560.1;Parent=gene-LPH58_RS11125;Dbxref=Genbank:WP_152536560.1;Name=WP_152536560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11125;product=hypothetical protein;protein_id=WP_152536560.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2628640 2628846 . - . ID=gene-LPH58_RS11130;Name=LPH58_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11130;old_locus_tag=LPH58_11130 NZ_CP087690.1 GeneMarkS-2+ CDS 2628640 2628846 . - 0 ID=cds-WP_200866176.1;Parent=gene-LPH58_RS11130;Dbxref=Genbank:WP_200866176.1;Name=WP_200866176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11130;product=hypothetical protein;protein_id=WP_200866176.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2628852 2629049 . - . ID=gene-LPH58_RS11135;Name=LPH58_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11135;old_locus_tag=LPH58_11135 NZ_CP087690.1 GeneMarkS-2+ CDS 2628852 2629049 . - 0 ID=cds-WP_200866175.1;Parent=gene-LPH58_RS11135;Dbxref=Genbank:WP_200866175.1;Name=WP_200866175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11135;product=hypothetical protein;protein_id=WP_200866175.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2629241 2629702 . - . ID=gene-LPH58_RS11140;Name=LPH58_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11140;old_locus_tag=LPH58_11140 NZ_CP087690.1 Protein Homology CDS 2629241 2629702 . - 0 ID=cds-WP_038269873.1;Parent=gene-LPH58_RS11140;Dbxref=Genbank:WP_038269873.1;Name=WP_038269873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452058.1;locus_tag=LPH58_RS11140;product=helix-turn-helix domain-containing protein;protein_id=WP_038269873.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2629807 2630628 . + . ID=gene-LPH58_RS11145;Name=LPH58_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11145;old_locus_tag=LPH58_11145 NZ_CP087690.1 Protein Homology CDS 2629807 2630628 . + 0 ID=cds-WP_038269871.1;Parent=gene-LPH58_RS11145;Dbxref=Genbank:WP_038269871.1;Name=WP_038269871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018971963.1;locus_tag=LPH58_RS11145;product=oxidoreductase;protein_id=WP_038269871.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2631823 2634393 . - . ID=gene-LPH58_RS11150;Name=LPH58_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11150;old_locus_tag=LPH58_11150 NZ_CP087690.1 Protein Homology CDS 2631823 2634393 . - 0 ID=cds-WP_038269868.1;Parent=gene-LPH58_RS11150;Dbxref=Genbank:WP_038269868.1;Name=WP_038269868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098254.1;locus_tag=LPH58_RS11150;product=glycosyltransferase family 1 protein;protein_id=WP_038269868.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2634390 2634620 . - . ID=gene-LPH58_RS11155;Name=LPH58_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11155;old_locus_tag=LPH58_11155 NZ_CP087690.1 Protein Homology CDS 2634390 2634620 . - 0 ID=cds-WP_038269866.1;Parent=gene-LPH58_RS11155;Dbxref=Genbank:WP_038269866.1;Name=WP_038269866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852549.1;locus_tag=LPH58_RS11155;product=hypothetical protein;protein_id=WP_038269866.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2634642 2635970 . - . ID=gene-LPH58_RS11160;Name=LPH58_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11160;old_locus_tag=LPH58_11160 NZ_CP087690.1 Protein Homology CDS 2634642 2635970 . - 0 ID=cds-WP_038269863.1;Parent=gene-LPH58_RS11160;Dbxref=Genbank:WP_038269863.1;Name=WP_038269863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088227.1;locus_tag=LPH58_RS11160;product=glycosyltransferase;protein_id=WP_038269863.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2636065 2638443 . + . ID=gene-LPH58_RS11165;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=LPH58_RS11165;old_locus_tag=LPH58_11165 NZ_CP087690.1 Protein Homology CDS 2636065 2638443 . + 0 ID=cds-WP_051482236.1;Parent=gene-LPH58_RS11165;Dbxref=Genbank:WP_051482236.1;Name=WP_051482236.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852547.1;locus_tag=LPH58_RS11165;product=penicillin-binding protein 1B;protein_id=WP_051482236.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2638440 2638991 . + . ID=gene-LPH58_RS11170;Name=LPH58_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11170;old_locus_tag=LPH58_11170 NZ_CP087690.1 Protein Homology CDS 2638440 2638991 . + 0 ID=cds-WP_038269860.1;Parent=gene-LPH58_RS11170;Dbxref=Genbank:WP_038269860.1;Name=WP_038269860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088223.1;locus_tag=LPH58_RS11170;product=hypothetical protein;protein_id=WP_038269860.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2639111 2641114 . + . ID=gene-LPH58_RS11175;Name=LPH58_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11175;old_locus_tag=LPH58_11175 NZ_CP087690.1 Protein Homology CDS 2639111 2641114 . + 0 ID=cds-WP_038269857.1;Parent=gene-LPH58_RS11175;Dbxref=Genbank:WP_038269857.1;Name=WP_038269857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338070.1;locus_tag=LPH58_RS11175;product=ATP-dependent DNA helicase;protein_id=WP_038269857.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2641134 2641679 . - . ID=gene-LPH58_RS11180;Name=LPH58_RS11180;end_range=2641679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11180;old_locus_tag=LPH58_11180;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 2641134 2641679 . - 0 ID=cds-LPH58_RS11180;Parent=gene-LPH58_RS11180;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2641679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008574705.1;locus_tag=LPH58_RS11180;partial=true;product=D-alanyl-D-alanine carboxypeptidase family protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2642459 2643121 . - . ID=gene-LPH58_RS11185;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LPH58_RS11185;old_locus_tag=LPH58_11185 NZ_CP087690.1 Protein Homology CDS 2642459 2643121 . - 0 ID=cds-WP_038269855.1;Parent=gene-LPH58_RS11185;Dbxref=Genbank:WP_038269855.1;Name=WP_038269855.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016902447.1;locus_tag=LPH58_RS11185;product=carbonate dehydratase;protein_id=WP_038269855.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2643848 2644960 . - . ID=gene-LPH58_RS11190;Name=LPH58_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11190;old_locus_tag=LPH58_11190 NZ_CP087690.1 Protein Homology CDS 2643848 2644960 . - 0 ID=cds-WP_038269853.1;Parent=gene-LPH58_RS11190;Dbxref=Genbank:WP_038269853.1;Name=WP_038269853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893399.1;locus_tag=LPH58_RS11190;product=glycosyltransferase family 4 protein;protein_id=WP_038269853.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2644957 2645676 . - . ID=gene-LPH58_RS11195;Name=LPH58_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11195;old_locus_tag=LPH58_11195 NZ_CP087690.1 Protein Homology CDS 2644957 2645676 . - 0 ID=cds-WP_038269943.1;Parent=gene-LPH58_RS11195;Dbxref=Genbank:WP_038269943.1;Name=WP_038269943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098260.1;locus_tag=LPH58_RS11195;product=polysaccharide deacetylase family protein;protein_id=WP_038269943.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2646047 2646208 . + . ID=gene-LPH58_RS11200;Name=LPH58_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11200;old_locus_tag=LPH58_11200 NZ_CP087690.1 Protein Homology CDS 2646047 2646208 . + 0 ID=cds-WP_171898068.1;Parent=gene-LPH58_RS11200;Dbxref=Genbank:WP_171898068.1;Name=WP_171898068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088209.1;locus_tag=LPH58_RS11200;product=hypothetical protein;protein_id=WP_171898068.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2647415 2648422 . + . ID=gene-LPH58_RS11205;Name=LPH58_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11205;old_locus_tag=LPH58_11205 NZ_CP087690.1 Protein Homology CDS 2647415 2648422 . + 0 ID=cds-WP_038269940.1;Parent=gene-LPH58_RS11205;Dbxref=Genbank:WP_038269940.1;Name=WP_038269940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038713.1;locus_tag=LPH58_RS11205;product=methionine ABC transporter ATP-binding protein;protein_id=WP_038269940.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2648419 2649126 . + . ID=gene-LPH58_RS11210;Name=LPH58_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11210;old_locus_tag=LPH58_11210 NZ_CP087690.1 Protein Homology CDS 2648419 2649126 . + 0 ID=cds-WP_051482234.1;Parent=gene-LPH58_RS11210;Dbxref=Genbank:WP_051482234.1;Name=WP_051482234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011038712.1;locus_tag=LPH58_RS11210;product=ABC transporter permease;protein_id=WP_051482234.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2649224 2650009 . + . ID=gene-LPH58_RS11215;Name=LPH58_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11215;old_locus_tag=LPH58_11215 NZ_CP087690.1 Protein Homology CDS 2649224 2650009 . + 0 ID=cds-WP_038269848.1;Parent=gene-LPH58_RS11215;Dbxref=Genbank:WP_038269848.1;Name=WP_038269848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893393.1;locus_tag=LPH58_RS11215;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_038269848.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2650107 2650751 . - . ID=gene-LPH58_RS11220;Name=LPH58_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11220;old_locus_tag=LPH58_11220 NZ_CP087690.1 Protein Homology CDS 2650107 2650751 . - 0 ID=cds-WP_038269846.1;Parent=gene-LPH58_RS11220;Dbxref=Genbank:WP_038269846.1;Name=WP_038269846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007974312.1;locus_tag=LPH58_RS11220;product=outer membrane beta-barrel protein;protein_id=WP_038269846.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2651467 2651778 . + . ID=gene-LPH58_RS11225;Name=LPH58_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11225;old_locus_tag=LPH58_11225 NZ_CP087690.1 GeneMarkS-2+ CDS 2651467 2651778 . + 0 ID=cds-WP_038269844.1;Parent=gene-LPH58_RS11225;Dbxref=Genbank:WP_038269844.1;Name=WP_038269844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11225;product=hypothetical protein;protein_id=WP_038269844.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2651970 2653622 . + . ID=gene-LPH58_RS11230;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=LPH58_RS11230;old_locus_tag=LPH58_11230 NZ_CP087690.1 Protein Homology CDS 2651970 2653622 . + 0 ID=cds-WP_038269842.1;Parent=gene-LPH58_RS11230;Dbxref=Genbank:WP_038269842.1;Name=WP_038269842.1;Ontology_term=GO:0006086,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893389.1;locus_tag=LPH58_RS11230;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_038269842.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2654192 2656003 . + . ID=gene-LPH58_RS11235;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LPH58_RS11235;old_locus_tag=LPH58_11235 NZ_CP087690.1 Protein Homology CDS 2654192 2656003 . + 0 ID=cds-WP_038269840.1;Parent=gene-LPH58_RS11235;Dbxref=Genbank:WP_038269840.1;Name=WP_038269840.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084365.1;locus_tag=LPH58_RS11235;product=dihydrolipoyl dehydrogenase;protein_id=WP_038269840.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2656297 2656425 . - . ID=gene-LPH58_RS12030;Name=LPH58_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS12030 NZ_CP087690.1 GeneMarkS-2+ CDS 2656297 2656425 . - 0 ID=cds-WP_267903163.1;Parent=gene-LPH58_RS12030;Dbxref=Genbank:WP_267903163.1;Name=WP_267903163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS12030;product=hypothetical protein;protein_id=WP_267903163.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2656706 2657758 . + . ID=gene-LPH58_RS11240;Name=LPH58_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11240;old_locus_tag=LPH58_11240 NZ_CP087690.1 Protein Homology CDS 2656706 2657758 . + 0 ID=cds-WP_051482233.1;Parent=gene-LPH58_RS11240;Dbxref=Genbank:WP_051482233.1;Name=WP_051482233.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013884.2;locus_tag=LPH58_RS11240;product=acyltransferase;protein_id=WP_051482233.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2657966 2658868 . - . ID=gene-LPH58_RS11245;Name=LPH58_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11245;old_locus_tag=LPH58_11245 NZ_CP087690.1 Protein Homology CDS 2657966 2658868 . - 0 ID=cds-WP_038269838.1;Parent=gene-LPH58_RS11245;Dbxref=Genbank:WP_038269838.1;Name=WP_038269838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084369.1;locus_tag=LPH58_RS11245;product=cation diffusion facilitator family transporter;protein_id=WP_038269838.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2660398 2661603 . - . ID=gene-LPH58_RS11250;Name=LPH58_RS11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11250;old_locus_tag=LPH58_11250 NZ_CP087690.1 Protein Homology CDS 2660398 2661603 . - 0 ID=cds-WP_038269836.1;Parent=gene-LPH58_RS11250;Dbxref=Genbank:WP_038269836.1;Name=WP_038269836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014038152.1;locus_tag=LPH58_RS11250;product=O-succinylhomoserine (thiol)-lyase;protein_id=WP_038269836.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2661600 2662628 . - . ID=gene-LPH58_RS11255;Name=LPH58_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11255;old_locus_tag=LPH58_11255 NZ_CP087690.1 Protein Homology CDS 2661600 2662628 . - 0 ID=cds-WP_038269931.1;Parent=gene-LPH58_RS11255;Dbxref=Genbank:WP_038269931.1;Name=WP_038269931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084371.1;locus_tag=LPH58_RS11255;product=homoserine O-succinyltransferase;protein_id=WP_038269931.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2662949 2663821 . + . ID=gene-LPH58_RS11260;Name=LPH58_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11260;old_locus_tag=LPH58_11260 NZ_CP087690.1 Protein Homology CDS 2662949 2663821 . + 0 ID=cds-WP_038269928.1;Parent=gene-LPH58_RS11260;Dbxref=Genbank:WP_038269928.1;Name=WP_038269928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851712.1;locus_tag=LPH58_RS11260;product=M23 family metallopeptidase;protein_id=WP_038269928.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2666237 2667025 . + . ID=gene-LPH58_RS11265;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LPH58_RS11265;old_locus_tag=LPH58_11265 NZ_CP087690.1 Protein Homology CDS 2666237 2667025 . + 0 ID=cds-WP_038269831.1;Parent=gene-LPH58_RS11265;Dbxref=Genbank:WP_038269831.1;Name=WP_038269831.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084374.1;locus_tag=LPH58_RS11265;product=5'/3'-nucleotidase SurE;protein_id=WP_038269831.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2667022 2667699 . + . ID=gene-LPH58_RS11270;Name=LPH58_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11270;old_locus_tag=LPH58_11270 NZ_CP087690.1 Protein Homology CDS 2667022 2667699 . + 0 ID=cds-WP_038269829.1;Parent=gene-LPH58_RS11270;Dbxref=Genbank:WP_038269829.1;Name=WP_038269829.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014503664.1;locus_tag=LPH58_RS11270;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_038269829.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2667724 2668338 . + . ID=gene-LPH58_RS11275;Name=LPH58_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11275;old_locus_tag=LPH58_11275 NZ_CP087690.1 Protein Homology CDS 2667724 2668338 . + 0 ID=cds-WP_038269827.1;Parent=gene-LPH58_RS11275;Dbxref=Genbank:WP_038269827.1;Name=WP_038269827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003481846.1;locus_tag=LPH58_RS11275;product=YqaA family protein;protein_id=WP_038269827.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2668350 2669120 . + . ID=gene-LPH58_RS11280;Name=LPH58_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11280;old_locus_tag=LPH58_11280 NZ_CP087690.1 Protein Homology CDS 2668350 2669120 . + 0 ID=cds-WP_051482232.1;Parent=gene-LPH58_RS11280;Dbxref=Genbank:WP_051482232.1;Name=WP_051482232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088187.1;locus_tag=LPH58_RS11280;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_051482232.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2669704 2669780 . + . ID=gene-LPH58_RS11285;Name=LPH58_RS11285;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11285;old_locus_tag=LPH58_11285 NZ_CP087690.1 tRNAscan-SE tRNA 2669704 2669780 . + . ID=rna-LPH58_RS11285;Parent=gene-LPH58_RS11285;anticodon=(pos:2669738..2669740);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11285;product=tRNA-Pro NZ_CP087690.1 tRNAscan-SE exon 2669704 2669780 . + . ID=exon-LPH58_RS11285-1;Parent=rna-LPH58_RS11285;anticodon=(pos:2669738..2669740);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11285;product=tRNA-Pro NZ_CP087690.1 RefSeq pseudogene 2670854 2672329 . - . ID=gene-LPH58_RS11290;Name=LPH58_RS11290;end_range=2672329,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11290;old_locus_tag=LPH58_11290;partial=true;pseudo=true;start_range=.,2670854 NZ_CP087690.1 Protein Homology CDS 2670854 2672329 . - 0 ID=cds-LPH58_RS11290;Parent=gene-LPH58_RS11290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=2672329,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017157452.1;locus_tag=LPH58_RS11290;partial=true;product=PAS domain-containing sensor histidine kinase;pseudo=true;start_range=.,2670854;transl_table=11 NZ_CP087690.1 RefSeq gene 2672995 2674083 . - . ID=gene-LPH58_RS11295;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LPH58_RS11295;old_locus_tag=LPH58_11295 NZ_CP087690.1 Protein Homology CDS 2672995 2674083 . - 0 ID=cds-WP_038269820.1;Parent=gene-LPH58_RS11295;Dbxref=Genbank:WP_038269820.1;Name=WP_038269820.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088182.1;locus_tag=LPH58_RS11295;product=alanine racemase;protein_id=WP_038269820.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2674096 2675370 . - . ID=gene-LPH58_RS11300;Name=LPH58_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11300;old_locus_tag=LPH58_11300 NZ_CP087690.1 Protein Homology CDS 2674096 2675370 . - 0 ID=cds-WP_038269817.1;Parent=gene-LPH58_RS11300;Dbxref=Genbank:WP_038269817.1;Name=WP_038269817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088180.1;locus_tag=LPH58_RS11300;product=D-amino acid dehydrogenase;protein_id=WP_038269817.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2675678 2675836 . - . ID=gene-LPH58_RS11305;Name=LPH58_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11305;old_locus_tag=LPH58_11305 NZ_CP087690.1 GeneMarkS-2+ CDS 2675678 2675836 . - 0 ID=cds-WP_160165111.1;Parent=gene-LPH58_RS11305;Dbxref=Genbank:WP_160165111.1;Name=WP_160165111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11305;product=hypothetical protein;protein_id=WP_160165111.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2675853 2676320 . + . ID=gene-LPH58_RS11310;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LPH58_RS11310;old_locus_tag=LPH58_11310 NZ_CP087690.1 Protein Homology CDS 2675853 2676320 . + 0 ID=cds-WP_038269923.1;Parent=gene-LPH58_RS11310;Dbxref=Genbank:WP_038269923.1;Name=WP_038269923.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088178.1;locus_tag=LPH58_RS11310;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_038269923.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2676911 2677966 . + . ID=gene-LPH58_RS11315;Name=LPH58_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11315;old_locus_tag=LPH58_11315 NZ_CP087690.1 Protein Homology CDS 2676911 2677966 . + 0 ID=cds-WP_038269813.1;Parent=gene-LPH58_RS11315;Dbxref=Genbank:WP_038269813.1;Name=WP_038269813.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007970189.1;locus_tag=LPH58_RS11315;product=glycosyl hydrolase family 18 protein;protein_id=WP_038269813.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2678050 2680485 . + . ID=gene-LPH58_RS11320;Name=LPH58_RS11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11320;old_locus_tag=LPH58_11320 NZ_CP087690.1 Protein Homology CDS 2678050 2680485 . + 0 ID=cds-WP_038269811.1;Parent=gene-LPH58_RS11320;Dbxref=Genbank:WP_038269811.1;Name=WP_038269811.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851724.1;locus_tag=LPH58_RS11320;product=family 20 glycosylhydrolase;protein_id=WP_038269811.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2680506 2683187 . + . ID=gene-LPH58_RS11325;Name=LPH58_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11325;old_locus_tag=LPH58_11325 NZ_CP087690.1 Protein Homology CDS 2680506 2683187 . + 0 ID=cds-WP_038269809.1;Parent=gene-LPH58_RS11325;Dbxref=Genbank:WP_038269809.1;Name=WP_038269809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088171.1;locus_tag=LPH58_RS11325;product=glycoside hydrolase family 2 protein;protein_id=WP_038269809.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2683233 2685887 . + . ID=gene-LPH58_RS11330;Name=LPH58_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11330;old_locus_tag=LPH58_11330 NZ_CP087690.1 Protein Homology CDS 2683233 2685887 . + 0 ID=cds-WP_038269807.1;Parent=gene-LPH58_RS11330;Dbxref=Genbank:WP_038269807.1;Name=WP_038269807.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338083.1;locus_tag=LPH58_RS11330;product=glycoside hydrolase family 3 protein;protein_id=WP_038269807.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2686014 2686160 . + . ID=gene-LPH58_RS11335;Name=LPH58_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11335;old_locus_tag=LPH58_11335 NZ_CP087690.1 GeneMarkS-2+ CDS 2686014 2686160 . + 0 ID=cds-WP_160165110.1;Parent=gene-LPH58_RS11335;Dbxref=Genbank:WP_160165110.1;Name=WP_160165110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11335;product=hypothetical protein;protein_id=WP_160165110.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2686269 2687795 . + . ID=gene-LPH58_RS11340;Name=LPH58_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11340;old_locus_tag=LPH58_11340 NZ_CP087690.1 Protein Homology CDS 2686269 2687795 . + 0 ID=cds-WP_038269805.1;Parent=gene-LPH58_RS11340;Dbxref=Genbank:WP_038269805.1;Name=WP_038269805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084411.1;locus_tag=LPH58_RS11340;product=glycoside hydrolase family 125 protein;protein_id=WP_038269805.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2687853 2690249 . + . ID=gene-LPH58_RS11345;Name=LPH58_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11345;old_locus_tag=LPH58_11345 NZ_CP087690.1 Protein Homology CDS 2687853 2690249 . + 0 ID=cds-WP_038269803.1;Parent=gene-LPH58_RS11345;Dbxref=Genbank:WP_038269803.1;Name=WP_038269803.1;Ontology_term=GO:0005975,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084413.1;locus_tag=LPH58_RS11345;product=GH92 family glycosyl hydrolase;protein_id=WP_038269803.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2690435 2692315 . + . ID=gene-LPH58_RS11350;Name=LPH58_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11350;old_locus_tag=LPH58_11350 NZ_CP087690.1 Protein Homology CDS 2690435 2692315 . + 0 ID=cds-WP_051482231.1;Parent=gene-LPH58_RS11350;Dbxref=Genbank:WP_051482231.1;Name=WP_051482231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348229.1;locus_tag=LPH58_RS11350;product=beta-galactosidase;protein_id=WP_051482231.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2692605 2693597 . - . ID=gene-LPH58_RS11355;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LPH58_RS11355;old_locus_tag=LPH58_11355 NZ_CP087690.1 Protein Homology CDS 2692605 2693597 . - 0 ID=cds-WP_038269801.1;Parent=gene-LPH58_RS11355;Dbxref=Genbank:WP_038269801.1;Name=WP_038269801.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893359.1;locus_tag=LPH58_RS11355;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_038269801.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2693602 2694966 . - . ID=gene-LPH58_RS11360;Name=LPH58_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11360;old_locus_tag=LPH58_11360 NZ_CP087690.1 Protein Homology CDS 2693602 2694966 . - 0 ID=cds-WP_038269799.1;Parent=gene-LPH58_RS11360;Dbxref=Genbank:WP_038269799.1;Name=WP_038269799.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851732.1;locus_tag=LPH58_RS11360;product=peptidylprolyl isomerase;protein_id=WP_038269799.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2694963 2697341 . - . ID=gene-LPH58_RS11365;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=LPH58_RS11365;old_locus_tag=LPH58_11365 NZ_CP087690.1 Protein Homology CDS 2694963 2697341 . - 0 ID=cds-WP_038269796.1;Parent=gene-LPH58_RS11365;Dbxref=Genbank:WP_038269796.1;Name=WP_038269796.1;gbkey=CDS;gene=lptD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084427.1;locus_tag=LPH58_RS11365;product=LPS-assembly protein LptD;protein_id=WP_038269796.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2698486 2698656 . + . ID=gene-LPH58_RS11370;Name=LPH58_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11370;old_locus_tag=LPH58_11370 NZ_CP087690.1 GeneMarkS-2+ CDS 2698486 2698656 . + 0 ID=cds-WP_160165108.1;Parent=gene-LPH58_RS11370;Dbxref=Genbank:WP_160165108.1;Name=WP_160165108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11370;product=hypothetical protein;protein_id=WP_160165108.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2698718 2699926 . + . ID=gene-LPH58_RS11375;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=LPH58_RS11375;old_locus_tag=LPH58_11375 NZ_CP087690.1 Protein Homology CDS 2698718 2699926 . + 0 ID=cds-WP_038269792.1;Parent=gene-LPH58_RS11375;Dbxref=Genbank:WP_038269792.1;Name=WP_038269792.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084429.1;locus_tag=LPH58_RS11375;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_038269792.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2699923 2701104 . + . ID=gene-LPH58_RS11380;Name=LPH58_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11380;old_locus_tag=LPH58_11380 NZ_CP087690.1 Protein Homology CDS 2699923 2701104 . + 0 ID=cds-WP_038269789.1;Parent=gene-LPH58_RS11380;Dbxref=Genbank:WP_038269789.1;Name=WP_038269789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088154.1;locus_tag=LPH58_RS11380;product=UbiH/UbiF family hydroxylase;protein_id=WP_038269789.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2701288 2702055 . - . ID=gene-LPH58_RS11385;Name=LPH58_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11385;old_locus_tag=LPH58_11385 NZ_CP087690.1 Protein Homology CDS 2701288 2702055 . - 0 ID=cds-WP_230428258.1;Parent=gene-LPH58_RS11385;Dbxref=Genbank:WP_230428258.1;Name=WP_230428258.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018431.2;locus_tag=LPH58_RS11385;product=AraC family transcriptional regulator;protein_id=WP_230428258.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2702388 2702990 . + . ID=gene-LPH58_RS11390;Name=LPH58_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11390;old_locus_tag=LPH58_11390 NZ_CP087690.1 Protein Homology CDS 2702388 2702990 . + 0 ID=cds-WP_038269784.1;Parent=gene-LPH58_RS11390;Dbxref=Genbank:WP_038269784.1;Name=WP_038269784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014573.2;locus_tag=LPH58_RS11390;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_038269784.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2703022 2703174 . + . ID=gene-LPH58_RS11395;Name=LPH58_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11395;old_locus_tag=LPH58_11395 NZ_CP087690.1 GeneMarkS-2+ CDS 2703022 2703174 . + 0 ID=cds-WP_160165107.1;Parent=gene-LPH58_RS11395;Dbxref=Genbank:WP_160165107.1;Name=WP_160165107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11395;product=hypothetical protein;protein_id=WP_160165107.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2703386 2704363 . - . ID=gene-LPH58_RS11400;Name=LPH58_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11400;old_locus_tag=LPH58_11400 NZ_CP087690.1 Protein Homology CDS 2703386 2704363 . - 0 ID=cds-WP_038269781.1;Parent=gene-LPH58_RS11400;Dbxref=Genbank:WP_038269781.1;Name=WP_038269781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003477207.1;locus_tag=LPH58_RS11400;product=LysR family transcriptional regulator;protein_id=WP_038269781.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2704515 2705945 . + . ID=gene-LPH58_RS11405;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=LPH58_RS11405;old_locus_tag=LPH58_11405 NZ_CP087690.1 Protein Homology CDS 2704515 2705945 . + 0 ID=cds-WP_038269779.1;Parent=gene-LPH58_RS11405;Dbxref=Genbank:WP_038269779.1;Name=WP_038269779.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851739.1;locus_tag=LPH58_RS11405;product=siroheme synthase CysG;protein_id=WP_038269779.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2706005 2706964 . + . ID=gene-LPH58_RS11410;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=LPH58_RS11410;old_locus_tag=LPH58_11410 NZ_CP087690.1 Protein Homology CDS 2706005 2706964 . + 0 ID=cds-WP_038269776.1;Parent=gene-LPH58_RS11410;Dbxref=Genbank:WP_038269776.1;Name=WP_038269776.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851740.1;locus_tag=LPH58_RS11410;product=cysteine synthase A;protein_id=WP_038269776.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2707078 2707398 . - . ID=gene-LPH58_RS11415;Name=LPH58_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11415;old_locus_tag=LPH58_11415 NZ_CP087690.1 GeneMarkS-2+ CDS 2707078 2707398 . - 0 ID=cds-WP_038269774.1;Parent=gene-LPH58_RS11415;Dbxref=Genbank:WP_038269774.1;Name=WP_038269774.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11415;product=hypothetical protein;protein_id=WP_038269774.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2708390 2709394 . - . ID=gene-LPH58_RS11420;Name=LPH58_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11420;old_locus_tag=LPH58_11420 NZ_CP087690.1 Protein Homology CDS 2708390 2709394 . - 0 ID=cds-WP_038269772.1;Parent=gene-LPH58_RS11420;Dbxref=Genbank:WP_038269772.1;Name=WP_038269772.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437525.1;locus_tag=LPH58_RS11420;product=fructose-bisphosphate aldolase class I;protein_id=WP_038269772.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2709497 2709826 . - . ID=gene-LPH58_RS11425;Name=LPH58_RS11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11425;old_locus_tag=LPH58_11425 NZ_CP087690.1 GeneMarkS-2+ CDS 2709497 2709826 . - 0 ID=cds-WP_038269769.1;Parent=gene-LPH58_RS11425;Dbxref=Genbank:WP_038269769.1;Name=WP_038269769.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11425;product=hypothetical protein;protein_id=WP_038269769.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2710167 2711633 . - . ID=gene-LPH58_RS11430;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LPH58_RS11430;old_locus_tag=LPH58_11430 NZ_CP087690.1 Protein Homology CDS 2710167 2711633 . - 0 ID=cds-WP_038269766.1;Parent=gene-LPH58_RS11430;Dbxref=Genbank:WP_038269766.1;Name=WP_038269766.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487265.1;locus_tag=LPH58_RS11430;product=pyruvate kinase;protein_id=WP_038269766.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2712352 2713527 . - . ID=gene-LPH58_RS11435;Name=LPH58_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11435;old_locus_tag=LPH58_11435 NZ_CP087690.1 Protein Homology CDS 2712352 2713527 . - 0 ID=cds-WP_038269917.1;Parent=gene-LPH58_RS11435;Dbxref=Genbank:WP_038269917.1;Name=WP_038269917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012445624.1;locus_tag=LPH58_RS11435;product=phosphoglycerate kinase;protein_id=WP_038269917.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2714243 2714416 . - . ID=gene-LPH58_RS11440;Name=LPH58_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11440;old_locus_tag=LPH58_11440 NZ_CP087690.1 GeneMarkS-2+ CDS 2714243 2714416 . - 0 ID=cds-WP_160165105.1;Parent=gene-LPH58_RS11440;Dbxref=Genbank:WP_160165105.1;Name=WP_160165105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11440;product=hypothetical protein;protein_id=WP_160165105.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2714886 2715206 . + . ID=gene-LPH58_RS11445;Name=LPH58_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11445;old_locus_tag=LPH58_11445 NZ_CP087690.1 GeneMarkS-2+ CDS 2714886 2715206 . + 0 ID=cds-WP_038269764.1;Parent=gene-LPH58_RS11445;Dbxref=Genbank:WP_038269764.1;Name=WP_038269764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11445;product=hypothetical protein;protein_id=WP_038269764.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2715488 2716891 . + . ID=gene-LPH58_RS11450;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LPH58_RS11450;old_locus_tag=LPH58_11450 NZ_CP087690.1 Protein Homology CDS 2715488 2716891 . + 0 ID=cds-WP_038269762.1;Parent=gene-LPH58_RS11450;Dbxref=Genbank:WP_038269762.1;Name=WP_038269762.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019237481.1;locus_tag=LPH58_RS11450;product=glutamate--tRNA ligase;protein_id=WP_038269762.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2716909 2717418 . + . ID=gene-LPH58_RS11455;Name=LPH58_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11455;old_locus_tag=LPH58_11455 NZ_CP087690.1 Protein Homology CDS 2716909 2717418 . + 0 ID=cds-WP_038269759.1;Parent=gene-LPH58_RS11455;Dbxref=Genbank:WP_038269759.1;Name=WP_038269759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084453.1;locus_tag=LPH58_RS11455;product=Fur family transcriptional regulator;protein_id=WP_038269759.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2717643 2717888 . + . ID=gene-LPH58_RS11460;Name=LPH58_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11460;old_locus_tag=LPH58_11460 NZ_CP087690.1 GeneMarkS-2+ CDS 2717643 2717888 . + 0 ID=cds-WP_152536557.1;Parent=gene-LPH58_RS11460;Dbxref=Genbank:WP_152536557.1;Name=WP_152536557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11460;product=hypothetical protein;protein_id=WP_152536557.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2718171 2719829 . - . ID=gene-LPH58_RS11465;Name=LPH58_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11465;old_locus_tag=LPH58_11465 NZ_CP087690.1 Protein Homology CDS 2718171 2719829 . - 0 ID=cds-WP_038269755.1;Parent=gene-LPH58_RS11465;Dbxref=Genbank:WP_038269755.1;Name=WP_038269755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004088130.1;locus_tag=LPH58_RS11465;product=M28 family metallopeptidase;protein_id=WP_038269755.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2719935 2721509 . + . ID=gene-LPH58_RS11470;Name=LPH58_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11470;old_locus_tag=LPH58_11470 NZ_CP087690.1 Protein Homology CDS 2719935 2721509 . + 0 ID=cds-WP_114867228.1;Parent=gene-LPH58_RS11470;Dbxref=Genbank:WP_114867228.1;Name=WP_114867228.1;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084457.1;locus_tag=LPH58_RS11470;product=glycoside hydrolase family 5 protein;protein_id=WP_114867228.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2721551 2721715 . - . ID=gene-LPH58_RS11475;Name=LPH58_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11475;old_locus_tag=LPH58_11475 NZ_CP087690.1 GeneMarkS-2+ CDS 2721551 2721715 . - 0 ID=cds-WP_160165104.1;Parent=gene-LPH58_RS11475;Dbxref=Genbank:WP_160165104.1;Name=WP_160165104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11475;product=hypothetical protein;protein_id=WP_160165104.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2722015 2724882 . + . ID=gene-LPH58_RS11480;Name=LPH58_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11480;old_locus_tag=LPH58_11480 NZ_CP087690.1 Protein Homology CDS 2722015 2724882 . + 0 ID=cds-WP_038269753.1;Parent=gene-LPH58_RS11480;Dbxref=Genbank:WP_038269753.1;Name=WP_038269753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090532.1;locus_tag=LPH58_RS11480;product=pitrilysin family protein;protein_id=WP_038269753.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2726158 2726838 . - . ID=gene-LPH58_RS11485;Name=LPH58_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11485;old_locus_tag=LPH58_11485 NZ_CP087690.1 Protein Homology CDS 2726158 2726838 . - 0 ID=cds-WP_230428263.1;Parent=gene-LPH58_RS11485;Dbxref=Genbank:WP_230428263.1;Name=WP_230428263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098281.1;locus_tag=LPH58_RS11485;product=DUF2076 domain-containing protein;protein_id=WP_230428263.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2727150 2727998 . + . ID=gene-LPH58_RS11490;Name=LPH58_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11490;old_locus_tag=LPH58_11490 NZ_CP087690.1 Protein Homology CDS 2727150 2727998 . + 0 ID=cds-WP_081755384.1;Parent=gene-LPH58_RS11490;Dbxref=Genbank:WP_081755384.1;Name=WP_081755384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338088.1;locus_tag=LPH58_RS11490;product=SAM-dependent methyltransferase;protein_id=WP_081755384.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2728834 2729436 . - . ID=gene-LPH58_RS12035;Name=LPH58_RS12035;end_range=2729436,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS12035;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 2728834 2729436 . - 0 ID=cds-LPH58_RS12035;Parent=gene-LPH58_RS12035;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0030248;end_range=2729436,.;gbkey=CDS;go_function=cellulose binding|0030248||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003231419.1;locus_tag=LPH58_RS12035;partial=true;product=expansin EXLX1 family cellulose-binding protein;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2730007 2730450 . - . ID=gene-LPH58_RS12040;Name=LPH58_RS12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS12040;partial=true;pseudo=true;start_range=.,2730007 NZ_CP087690.1 Protein Homology CDS 2730007 2730450 . - 0 ID=cds-LPH58_RS12040;Parent=gene-LPH58_RS12040;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071704,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=organic substance metabolic process|0071704||IEA;inference=COORDINATES: protein motif:HMM:NF012377.2;locus_tag=LPH58_RS12040;partial=true;product=cellulase family glycosylhydrolase;pseudo=true;start_range=.,2730007;transl_table=11 NZ_CP087690.1 RefSeq gene 2731453 2734197 . - . ID=gene-LPH58_RS11500;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LPH58_RS11500;old_locus_tag=LPH58_11500 NZ_CP087690.1 Protein Homology CDS 2731453 2734197 . - 0 ID=cds-WP_038269738.1;Parent=gene-LPH58_RS11500;Dbxref=Genbank:WP_038269738.1;Name=WP_038269738.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017112773.1;locus_tag=LPH58_RS11500;product=preprotein translocase subunit SecA;protein_id=WP_038269738.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2734357 2735301 . - . ID=gene-LPH58_RS11505;Name=LPH58_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11505;old_locus_tag=LPH58_11505 NZ_CP087690.1 Protein Homology CDS 2734357 2735301 . - 0 ID=cds-WP_038269737.1;Parent=gene-LPH58_RS11505;Dbxref=Genbank:WP_038269737.1;Name=WP_038269737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017158828.1;locus_tag=LPH58_RS11505;product=M23 family metallopeptidase;protein_id=WP_038269737.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2735313 2735759 . + . ID=gene-LPH58_RS11510;Name=LPH58_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11510;old_locus_tag=LPH58_11510 NZ_CP087690.1 Protein Homology CDS 2735313 2735759 . + 0 ID=cds-WP_038269735.1;Parent=gene-LPH58_RS11510;Dbxref=Genbank:WP_038269735.1;Name=WP_038269735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090517.1;locus_tag=LPH58_RS11510;product=DUF721 domain-containing protein;protein_id=WP_038269735.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2735911 2736825 . - . ID=gene-LPH58_RS11515;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LPH58_RS11515;old_locus_tag=LPH58_11515 NZ_CP087690.1 Protein Homology CDS 2735911 2736825 . - 0 ID=cds-WP_038269734.1;Parent=gene-LPH58_RS11515;Dbxref=Genbank:WP_038269734.1;Name=WP_038269734.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893324.1;locus_tag=LPH58_RS11515;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_038269734.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2737184 2738413 . - . ID=gene-LPH58_RS11520;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LPH58_RS11520;old_locus_tag=LPH58_11520 NZ_CP087690.1 Protein Homology CDS 2737184 2738413 . - 0 ID=cds-WP_038269912.1;Parent=gene-LPH58_RS11520;Dbxref=Genbank:WP_038269912.1;Name=WP_038269912.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017170527.1;locus_tag=LPH58_RS11520;product=cell division protein FtsZ;protein_id=WP_038269912.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2738586 2739821 . - . ID=gene-LPH58_RS11525;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LPH58_RS11525;old_locus_tag=LPH58_11525 NZ_CP087690.1 Protein Homology CDS 2738586 2739821 . - 0 ID=cds-WP_038269733.1;Parent=gene-LPH58_RS11525;Dbxref=Genbank:WP_038269733.1;Name=WP_038269733.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398559.1;locus_tag=LPH58_RS11525;product=cell division protein FtsA;protein_id=WP_038269733.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2739818 2740654 . - . ID=gene-LPH58_RS11530;Name=LPH58_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11530;old_locus_tag=LPH58_11530 NZ_CP087690.1 Protein Homology CDS 2739818 2740654 . - 0 ID=cds-WP_038269909.1;Parent=gene-LPH58_RS11530;Dbxref=Genbank:WP_038269909.1;Name=WP_038269909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338090.1;locus_tag=LPH58_RS11530;product=cell division protein FtsQ/DivIB;protein_id=WP_038269909.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2740761 2741717 . - . ID=gene-LPH58_RS11535;Name=LPH58_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11535;old_locus_tag=LPH58_11535 NZ_CP087690.1 Protein Homology CDS 2740761 2741717 . - 0 ID=cds-WP_038269731.1;Parent=gene-LPH58_RS11535;Dbxref=Genbank:WP_038269731.1;Name=WP_038269731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851207.1;locus_tag=LPH58_RS11535;product=D-alanine--D-alanine ligase;protein_id=WP_038269731.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2741714 2743147 . - . ID=gene-LPH58_RS11540;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LPH58_RS11540;old_locus_tag=LPH58_11540 NZ_CP087690.1 Protein Homology CDS 2741714 2743147 . - 0 ID=cds-WP_038269729.1;Parent=gene-LPH58_RS11540;Dbxref=Genbank:WP_038269729.1;Name=WP_038269729.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851208.1;locus_tag=LPH58_RS11540;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_038269729.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2743203 2744297 . - . ID=gene-LPH58_RS11545;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LPH58_RS11545;old_locus_tag=LPH58_11545 NZ_CP087690.1 Protein Homology CDS 2743203 2744297 . - 0 ID=cds-WP_038269727.1;Parent=gene-LPH58_RS11545;Dbxref=Genbank:WP_038269727.1;Name=WP_038269727.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084474.1;locus_tag=LPH58_RS11545;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_038269727.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2744288 2745562 . - . ID=gene-LPH58_RS11550;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LPH58_RS11550;old_locus_tag=LPH58_11550 NZ_CP087690.1 Protein Homology CDS 2744288 2745562 . - 0 ID=cds-WP_038269725.1;Parent=gene-LPH58_RS11550;Dbxref=Genbank:WP_038269725.1;Name=WP_038269725.1;Ontology_term=GO:0009252,GO:0051301,GO:0003674,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851210.1;locus_tag=LPH58_RS11550;product=putative lipid II flippase FtsW;protein_id=WP_038269725.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2745562 2746647 . - . ID=gene-LPH58_RS11555;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LPH58_RS11555;old_locus_tag=LPH58_11555 NZ_CP087690.1 Protein Homology CDS 2745562 2746647 . - 0 ID=cds-WP_038269906.1;Parent=gene-LPH58_RS11555;Dbxref=Genbank:WP_038269906.1;Name=WP_038269906.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006452808.1;locus_tag=LPH58_RS11555;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_038269906.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2746637 2748043 . - . ID=gene-LPH58_RS11560;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LPH58_RS11560;old_locus_tag=LPH58_11560 NZ_CP087690.1 Protein Homology CDS 2746637 2748043 . - 0 ID=cds-WP_038269723.1;Parent=gene-LPH58_RS11560;Dbxref=Genbank:WP_038269723.1;Name=WP_038269723.1;Ontology_term=GO:0009252,GO:0047480;gbkey=CDS;gene=murF;go_function=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003485287.1;locus_tag=LPH58_RS11560;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_038269723.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2748043 2749515 . - . ID=gene-LPH58_RS11565;Name=LPH58_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11565;old_locus_tag=LPH58_11565 NZ_CP087690.1 Protein Homology CDS 2748043 2749515 . - 0 ID=cds-WP_038269721.1;Parent=gene-LPH58_RS11565;Dbxref=Genbank:WP_038269721.1;Name=WP_038269721.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084483.1;locus_tag=LPH58_RS11565;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_038269721.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2749524 2751365 . - . ID=gene-LPH58_RS11570;Name=LPH58_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11570;old_locus_tag=LPH58_11570 NZ_CP087690.1 Protein Homology CDS 2749524 2751365 . - 0 ID=cds-WP_038269719.1;Parent=gene-LPH58_RS11570;Dbxref=Genbank:WP_038269719.1;Name=WP_038269719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011098289.1;locus_tag=LPH58_RS11570;product=penicillin-binding protein 2;protein_id=WP_038269719.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2751362 2751625 . - . ID=gene-LPH58_RS11575;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LPH58_RS11575;old_locus_tag=LPH58_11575 NZ_CP087690.1 Protein Homology CDS 2751362 2751625 . - 0 ID=cds-WP_038269717.1;Parent=gene-LPH58_RS11575;Dbxref=Genbank:WP_038269717.1;Name=WP_038269717.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010344441.1;locus_tag=LPH58_RS11575;product=cell division protein FtsL;protein_id=WP_038269717.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2751622 2752608 . - . ID=gene-LPH58_RS11580;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LPH58_RS11580;old_locus_tag=LPH58_11580 NZ_CP087690.1 Protein Homology CDS 2751622 2752608 . - 0 ID=cds-WP_038269715.1;Parent=gene-LPH58_RS11580;Dbxref=Genbank:WP_038269715.1;Name=WP_038269715.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012382751.1;locus_tag=LPH58_RS11580;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_038269715.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2752619 2753074 . - . ID=gene-LPH58_RS11585;Name=LPH58_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11585;old_locus_tag=LPH58_11585 NZ_CP087690.1 Protein Homology CDS 2752619 2753074 . - 0 ID=cds-WP_114867229.1;Parent=gene-LPH58_RS11585;Dbxref=Genbank:WP_114867229.1;Name=WP_114867229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010367651.1;locus_tag=LPH58_RS11585;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_114867229.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2755136 2756998 . - . ID=gene-LPH58_RS11590;Name=LPH58_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11590;old_locus_tag=LPH58_11590 NZ_CP087690.1 Protein Homology CDS 2755136 2756998 . - 0 ID=cds-WP_038269710.1;Parent=gene-LPH58_RS11590;Dbxref=Genbank:WP_038269710.1;Name=WP_038269710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084493.1;locus_tag=LPH58_RS11590;product=SLC13 family permease;protein_id=WP_038269710.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2757029 2757763 . - . ID=gene-LPH58_RS11595;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LPH58_RS11595;old_locus_tag=LPH58_11595 NZ_CP087690.1 Protein Homology CDS 2757029 2757763 . - 0 ID=cds-WP_038269708.1;Parent=gene-LPH58_RS11595;Dbxref=Genbank:WP_038269708.1;Name=WP_038269708.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893307.1;locus_tag=LPH58_RS11595;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_038269708.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2757760 2758554 . - . ID=gene-LPH58_RS11600;Name=LPH58_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11600;old_locus_tag=LPH58_11600 NZ_CP087690.1 Protein Homology CDS 2757760 2758554 . - 0 ID=cds-WP_038269905.1;Parent=gene-LPH58_RS11600;Dbxref=Genbank:WP_038269905.1;Name=WP_038269905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_031337090.1;locus_tag=LPH58_RS11600;product=thiazole synthase;protein_id=WP_038269905.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2758603 2758803 . - . ID=gene-LPH58_RS11605;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LPH58_RS11605;old_locus_tag=LPH58_11605 NZ_CP087690.1 Protein Homology CDS 2758603 2758803 . - 0 ID=cds-WP_038269706.1;Parent=gene-LPH58_RS11605;Dbxref=Genbank:WP_038269706.1;Name=WP_038269706.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016944633.1;locus_tag=LPH58_RS11605;product=sulfur carrier protein ThiS;protein_id=WP_038269706.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2759000 2760772 . + . ID=gene-LPH58_RS11610;Name=LPH58_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11610;old_locus_tag=LPH58_11610 NZ_CP087690.1 Protein Homology CDS 2759000 2760772 . + 0 ID=cds-WP_171898096.1;Parent=gene-LPH58_RS11610;Dbxref=Genbank:WP_171898096.1;Name=WP_171898096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005914545.1;locus_tag=LPH58_RS11610;product=autotransporter domain-containing protein;protein_id=WP_171898096.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2760876 2760949 . + . ID=gene-LPH58_RS11615;Name=LPH58_RS11615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11615;old_locus_tag=LPH58_11615 NZ_CP087690.1 tRNAscan-SE tRNA 2760876 2760949 . + . ID=rna-LPH58_RS11615;Parent=gene-LPH58_RS11615;anticodon=(pos:2760908..2760910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11615;product=tRNA-Gly NZ_CP087690.1 tRNAscan-SE exon 2760876 2760949 . + . ID=exon-LPH58_RS11615-1;Parent=rna-LPH58_RS11615;anticodon=(pos:2760908..2760910);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11615;product=tRNA-Gly NZ_CP087690.1 RefSeq gene 2761127 2761552 . - . ID=gene-LPH58_RS11620;Name=LPH58_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11620;old_locus_tag=LPH58_11620 NZ_CP087690.1 Protein Homology CDS 2761127 2761552 . - 0 ID=cds-WP_038269904.1;Parent=gene-LPH58_RS11620;Dbxref=Genbank:WP_038269904.1;Name=WP_038269904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008571165.1;locus_tag=LPH58_RS11620;product=phosphotransferase;protein_id=WP_038269904.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2761539 2763905 . - . ID=gene-LPH58_RS11625;Name=LPH58_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11625;old_locus_tag=LPH58_11625 NZ_CP087690.1 Protein Homology CDS 2761539 2763905 . - 0 ID=cds-WP_038269903.1;Parent=gene-LPH58_RS11625;Dbxref=Genbank:WP_038269903.1;Name=WP_038269903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084505.1;locus_tag=LPH58_RS11625;product=MMPL family transporter;protein_id=WP_038269903.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2764089 2764733 . - . ID=gene-LPH58_RS11630;Name=LPH58_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11630;old_locus_tag=LPH58_11630 NZ_CP087690.1 Protein Homology CDS 2764089 2764733 . - 0 ID=cds-WP_081755386.1;Parent=gene-LPH58_RS11630;Dbxref=Genbank:WP_081755386.1;Name=WP_081755386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084509.1;locus_tag=LPH58_RS11630;product=fatty acyl CoA synthetase;protein_id=WP_081755386.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2764660 2765640 . - . ID=gene-LPH58_RS11635;Name=LPH58_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11635;old_locus_tag=LPH58_11635 NZ_CP087690.1 Protein Homology CDS 2764660 2765640 . - 0 ID=cds-WP_038269702.1;Parent=gene-LPH58_RS11635;Dbxref=Genbank:WP_038269702.1;Name=WP_038269702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084511.1;locus_tag=LPH58_RS11635;product=acyltransferase;protein_id=WP_038269702.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2765637 2765924 . - . ID=gene-LPH58_RS11640;Name=LPH58_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11640;old_locus_tag=LPH58_11640 NZ_CP087690.1 Protein Homology CDS 2765637 2765924 . - 0 ID=cds-WP_038269700.1;Parent=gene-LPH58_RS11640;Dbxref=Genbank:WP_038269700.1;Name=WP_038269700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090455.1;locus_tag=LPH58_RS11640;product=beta-hydroxyacyl-ACP dehydratase;protein_id=WP_038269700.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2766134 2766770 . - . ID=gene-LPH58_RS11645;Name=LPH58_RS11645;end_range=2766770,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11645;old_locus_tag=LPH58_11645;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 2766134 2766770 . - 1 ID=cds-LPH58_RS11645;Parent=gene-LPH58_RS11645;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2766770,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010342703.1;locus_tag=LPH58_RS11645;partial=true;product=ketosynthase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2766841 2767110 . - . ID=gene-LPH58_RS11650;Name=LPH58_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11650;old_locus_tag=LPH58_11650 NZ_CP087690.1 Protein Homology CDS 2766841 2767110 . - 0 ID=cds-WP_038269698.1;Parent=gene-LPH58_RS11650;Dbxref=Genbank:WP_038269698.1;Name=WP_038269698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039083.1;locus_tag=LPH58_RS11650;product=phosphopantetheine-binding protein;protein_id=WP_038269698.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2767287 2767525 . + . ID=gene-LPH58_RS11655;Name=LPH58_RS11655;end_range=2767525,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11655;old_locus_tag=LPH58_11655;partial=true;pseudo=true NZ_CP087690.1 Protein Homology CDS 2767287 2767525 . + 0 ID=cds-LPH58_RS11655;Parent=gene-LPH58_RS11655;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0071949;end_range=2767525,.;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003476649.1;locus_tag=LPH58_RS11655;partial=true;product=FAD-dependent monooxygenase;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2767732 2768652 . + . ID=gene-LPH58_RS11660;Name=LPH58_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11660;old_locus_tag=LPH58_11660 NZ_CP087690.1 Protein Homology CDS 2767732 2768652 . + 0 ID=cds-WP_114867230.1;Parent=gene-LPH58_RS11660;Dbxref=Genbank:WP_114867230.1;Name=WP_114867230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003487396.1;locus_tag=LPH58_RS11660;product=pteridine-dependent deoxygenase;protein_id=WP_114867230.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2768956 2769531 . + . ID=gene-LPH58_RS11665;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LPH58_RS11665;old_locus_tag=LPH58_11665 NZ_CP087690.1 Protein Homology CDS 2768956 2769531 . + 0 ID=cds-WP_038269697.1;Parent=gene-LPH58_RS11665;Dbxref=Genbank:WP_038269697.1;Name=WP_038269697.1;Ontology_term=GO:0009394,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=2'-deoxyribonucleotide metabolic process|0009394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005912996.1;locus_tag=LPH58_RS11665;product=dCTP deaminase;protein_id=WP_038269697.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2770044 2770997 . - . ID=gene-LPH58_RS11670;Name=LPH58_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11670;old_locus_tag=LPH58_11670 NZ_CP087690.1 Protein Homology CDS 2770044 2770997 . - 0 ID=cds-WP_038269695.1;Parent=gene-LPH58_RS11670;Dbxref=Genbank:WP_038269695.1;Name=WP_038269695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852470.1;locus_tag=LPH58_RS11670;product=DUF1684 domain-containing protein;protein_id=WP_038269695.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2770997 2772868 . - . ID=gene-LPH58_RS11675;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LPH58_RS11675;old_locus_tag=LPH58_11675 NZ_CP087690.1 Protein Homology CDS 2770997 2772868 . - 0 ID=cds-WP_038269692.1;Parent=gene-LPH58_RS11675;Dbxref=Genbank:WP_038269692.1;Name=WP_038269692.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037442.1;locus_tag=LPH58_RS11675;product=DNA mismatch repair endonuclease MutL;protein_id=WP_038269692.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2773007 2774626 . - . ID=gene-LPH58_RS11680;Name=LPH58_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11680;old_locus_tag=LPH58_11680 NZ_CP087690.1 Protein Homology CDS 2773007 2774626 . - 0 ID=cds-WP_038269690.1;Parent=gene-LPH58_RS11680;Dbxref=Genbank:WP_038269690.1;Name=WP_038269690.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037443.1;locus_tag=LPH58_RS11680;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_038269690.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2774685 2775173 . - . ID=gene-LPH58_RS11685;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LPH58_RS11685;old_locus_tag=LPH58_11685 NZ_CP087690.1 Protein Homology CDS 2774685 2775173 . - 0 ID=cds-WP_038269688.1;Parent=gene-LPH58_RS11685;Dbxref=Genbank:WP_038269688.1;Name=WP_038269688.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020852467.1;locus_tag=LPH58_RS11685;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_038269688.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2775170 2776660 . - . ID=gene-LPH58_RS11690;Name=LPH58_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11690;old_locus_tag=LPH58_11690 NZ_CP087690.1 Protein Homology CDS 2775170 2776660 . - 0 ID=cds-WP_038269686.1;Parent=gene-LPH58_RS11690;Dbxref=Genbank:WP_038269686.1;Name=WP_038269686.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893280.1;locus_tag=LPH58_RS11690;product=NAD(P)H-hydrate dehydratase;protein_id=WP_038269686.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2776987 2778321 . + . ID=gene-LPH58_RS11695;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LPH58_RS11695;old_locus_tag=LPH58_11695 NZ_CP087690.1 Protein Homology CDS 2776987 2778321 . + 0 ID=cds-WP_038269685.1;Parent=gene-LPH58_RS11695;Dbxref=Genbank:WP_038269685.1;Name=WP_038269685.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005994364.1;locus_tag=LPH58_RS11695;product=exodeoxyribonuclease VII large subunit;protein_id=WP_038269685.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2778382 2779638 . - . ID=gene-LPH58_RS11700;Name=LPH58_RS11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11700;old_locus_tag=LPH58_11700 NZ_CP087690.1 Protein Homology CDS 2778382 2779638 . - 0 ID=cds-WP_230428260.1;Parent=gene-LPH58_RS11700;Dbxref=Genbank:WP_230428260.1;Name=WP_230428260.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017835.2;locus_tag=LPH58_RS11700;product=virulence factor;protein_id=WP_230428260.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2779735 2781537 . - . ID=gene-LPH58_RS11705;Name=LPH58_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11705;old_locus_tag=LPH58_11705 NZ_CP087690.1 Protein Homology CDS 2779735 2781537 . - 0 ID=cds-WP_038269895.1;Parent=gene-LPH58_RS11705;Dbxref=Genbank:WP_038269895.1;Name=WP_038269895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338098.1;locus_tag=LPH58_RS11705;product=formylglycine-generating enzyme family protein;protein_id=WP_038269895.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2781660 2782751 . + . ID=gene-LPH58_RS11710;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=LPH58_RS11710;old_locus_tag=LPH58_11710 NZ_CP087690.1 Protein Homology CDS 2781660 2782751 . + 0 ID=cds-WP_038269683.1;Parent=gene-LPH58_RS11710;Dbxref=Genbank:WP_038269683.1;Name=WP_038269683.1;Ontology_term=GO:0006396,GO:0016891;gbkey=CDS;gene=rnd;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010893274.1;locus_tag=LPH58_RS11710;product=ribonuclease D;protein_id=WP_038269683.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2782994 2783398 . + . ID=gene-LPH58_RS11715;Name=LPH58_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11715;old_locus_tag=LPH58_11715 NZ_CP087690.1 Protein Homology CDS 2782994 2783398 . + 0 ID=cds-WP_038269681.1;Parent=gene-LPH58_RS11715;Dbxref=Genbank:WP_038269681.1;Name=WP_038269681.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084562.1;locus_tag=LPH58_RS11715;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_038269681.1;transl_table=11 NZ_CP087690.1 RefSeq pseudogene 2784843 2785785 . - . ID=gene-LPH58_RS11720;Name=LPH58_RS11720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LPH58_RS11720;old_locus_tag=LPH58_11720;pseudo=true NZ_CP087690.1 Protein Homology CDS 2784843 2785785 . - 0 ID=cds-LPH58_RS11720;Parent=gene-LPH58_RS11720;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014159927.1;locus_tag=LPH58_RS11720;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;pseudo=true;transl_table=11 NZ_CP087690.1 RefSeq gene 2785795 2786355 . - . ID=gene-LPH58_RS11725;Name=LPH58_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11725;old_locus_tag=LPH58_11725 NZ_CP087690.1 Protein Homology CDS 2785795 2786355 . - 0 ID=cds-WP_038269677.1;Parent=gene-LPH58_RS11725;Dbxref=Genbank:WP_038269677.1;Name=WP_038269677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008572602.1;locus_tag=LPH58_RS11725;product=nucleoside deaminase;protein_id=WP_038269677.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2786706 2786782 . - . ID=gene-LPH58_RS11730;Name=LPH58_RS11730;gbkey=Gene;gene_biotype=tRNA;locus_tag=LPH58_RS11730;old_locus_tag=LPH58_11730 NZ_CP087690.1 tRNAscan-SE tRNA 2786706 2786782 . - . ID=rna-LPH58_RS11730;Parent=gene-LPH58_RS11730;anticodon=(pos:complement(2786746..2786748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11730;product=tRNA-Pro NZ_CP087690.1 tRNAscan-SE exon 2786706 2786782 . - . ID=exon-LPH58_RS11730-1;Parent=rna-LPH58_RS11730;anticodon=(pos:complement(2786746..2786748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.9;locus_tag=LPH58_RS11730;product=tRNA-Pro NZ_CP087690.1 RefSeq gene 2786905 2787261 . - . ID=gene-LPH58_RS11735;Name=LPH58_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11735;old_locus_tag=LPH58_11735 NZ_CP087690.1 Protein Homology CDS 2786905 2787261 . - 0 ID=cds-WP_038269675.1;Parent=gene-LPH58_RS11735;Dbxref=Genbank:WP_038269675.1;Name=WP_038269675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019182707.1;locus_tag=LPH58_RS11735;product=MerR family transcriptional regulator;protein_id=WP_038269675.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2787242 2787541 . - . ID=gene-LPH58_RS11740;Name=LPH58_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11740;old_locus_tag=LPH58_11740 NZ_CP087690.1 Protein Homology CDS 2787242 2787541 . - 0 ID=cds-WP_038269673.1;Parent=gene-LPH58_RS11740;Dbxref=Genbank:WP_038269673.1;Name=WP_038269673.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002811076.1;locus_tag=LPH58_RS11740;product=integration host factor subunit alpha;protein_id=WP_038269673.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2787565 2789943 . - . ID=gene-LPH58_RS11745;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LPH58_RS11745;old_locus_tag=LPH58_11745 NZ_CP087690.1 Protein Homology CDS 2787565 2789943 . - 0 ID=cds-WP_038269671.1;Parent=gene-LPH58_RS11745;Dbxref=Genbank:WP_038269671.1;Name=WP_038269671.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903311.1;locus_tag=LPH58_RS11745;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_038269671.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2790035 2791030 . - . ID=gene-LPH58_RS11750;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LPH58_RS11750;old_locus_tag=LPH58_11750 NZ_CP087690.1 Protein Homology CDS 2790035 2791030 . - 0 ID=cds-WP_038269669.1;Parent=gene-LPH58_RS11750;Dbxref=Genbank:WP_038269669.1;Name=WP_038269669.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299936.1;locus_tag=LPH58_RS11750;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_038269669.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2791302 2791661 . - . ID=gene-LPH58_RS11755;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LPH58_RS11755;old_locus_tag=LPH58_11755 NZ_CP087690.1 Protein Homology CDS 2791302 2791661 . - 0 ID=cds-WP_038269666.1;Parent=gene-LPH58_RS11755;Dbxref=Genbank:WP_038269666.1;Name=WP_038269666.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011037598.1;locus_tag=LPH58_RS11755;product=50S ribosomal protein L20;protein_id=WP_038269666.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2791672 2791869 . - . ID=gene-LPH58_RS11760;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LPH58_RS11760;old_locus_tag=LPH58_11760 NZ_CP087690.1 Protein Homology CDS 2791672 2791869 . - 0 ID=cds-WP_038269890.1;Parent=gene-LPH58_RS11760;Dbxref=Genbank:WP_038269890.1;Name=WP_038269890.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005410436.1;locus_tag=LPH58_RS11760;product=50S ribosomal protein L35;protein_id=WP_038269890.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2792111 2792638 . - . ID=gene-LPH58_RS11765;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LPH58_RS11765;old_locus_tag=LPH58_11765 NZ_CP087690.1 Protein Homology CDS 2792111 2792638 . - 0 ID=cds-WP_081755382.1;Parent=gene-LPH58_RS11765;Dbxref=Genbank:WP_081755382.1;Name=WP_081755382.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660568.1;locus_tag=LPH58_RS11765;product=translation initiation factor IF-3;protein_id=WP_081755382.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2792706 2794613 . - . ID=gene-LPH58_RS11770;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LPH58_RS11770;old_locus_tag=LPH58_11770 NZ_CP087690.1 Protein Homology CDS 2792706 2794613 . - 0 ID=cds-WP_038269664.1;Parent=gene-LPH58_RS11770;Dbxref=Genbank:WP_038269664.1;Name=WP_038269664.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090399.1;locus_tag=LPH58_RS11770;product=threonine--tRNA ligase;protein_id=WP_038269664.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2795781 2796065 . + . ID=gene-LPH58_RS11775;Name=LPH58_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11775;old_locus_tag=LPH58_11775 NZ_CP087690.1 Protein Homology CDS 2795781 2796065 . + 0 ID=cds-WP_038269663.1;Parent=gene-LPH58_RS11775;Dbxref=Genbank:WP_038269663.1;Name=WP_038269663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019183923.1;locus_tag=LPH58_RS11775;product=hypothetical protein;protein_id=WP_038269663.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2798355 2799236 . + . ID=gene-LPH58_RS11780;Name=rimK;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=LPH58_RS11780;old_locus_tag=LPH58_11780 NZ_CP087690.1 Protein Homology CDS 2798355 2799236 . + 0 ID=cds-WP_038269662.1;Parent=gene-LPH58_RS11780;Dbxref=Genbank:WP_038269662.1;Name=WP_038269662.1;Ontology_term=GO:0036211,GO:0005524,GO:0046872;gbkey=CDS;gene=rimK;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004090391.1;locus_tag=LPH58_RS11780;product=30S ribosomal protein S6--L-glutamate ligase;protein_id=WP_038269662.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2799890 2800567 . + . ID=gene-LPH58_RS11785;Name=LPH58_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11785;old_locus_tag=LPH58_11785 NZ_CP087690.1 Protein Homology CDS 2799890 2800567 . + 0 ID=cds-WP_038269661.1;Parent=gene-LPH58_RS11785;Dbxref=Genbank:WP_038269661.1;Name=WP_038269661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017169438.1;locus_tag=LPH58_RS11785;product=response regulator transcription factor;protein_id=WP_038269661.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2800560 2801897 . + . ID=gene-LPH58_RS11790;Name=LPH58_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11790;old_locus_tag=LPH58_11790 NZ_CP087690.1 Protein Homology CDS 2800560 2801897 . + 0 ID=cds-WP_038269659.1;Parent=gene-LPH58_RS11790;Dbxref=Genbank:WP_038269659.1;Name=WP_038269659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084592.1;locus_tag=LPH58_RS11790;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_038269659.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2802196 2802831 . - . ID=gene-LPH58_RS11795;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LPH58_RS11795;old_locus_tag=LPH58_11795 NZ_CP087690.1 Protein Homology CDS 2802196 2802831 . - 0 ID=cds-WP_038269657.1;Parent=gene-LPH58_RS11795;Dbxref=Genbank:WP_038269657.1;Name=WP_038269657.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019398553.1;locus_tag=LPH58_RS11795;product=dephospho-CoA kinase;protein_id=WP_038269657.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2802843 2803706 . - . ID=gene-LPH58_RS11800;Name=LPH58_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11800;old_locus_tag=LPH58_11800 NZ_CP087690.1 Protein Homology CDS 2802843 2803706 . - 0 ID=cds-WP_038269655.1;Parent=gene-LPH58_RS11800;Dbxref=Genbank:WP_038269655.1;Name=WP_038269655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019660173.1;locus_tag=LPH58_RS11800;product=A24 family peptidase;protein_id=WP_038269655.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2803713 2804915 . - . ID=gene-LPH58_RS11805;Name=LPH58_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11805;old_locus_tag=LPH58_11805 NZ_CP087690.1 Protein Homology CDS 2803713 2804915 . - 0 ID=cds-WP_114867231.1;Parent=gene-LPH58_RS11805;Dbxref=Genbank:WP_114867231.1;Name=WP_114867231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894959.1;locus_tag=LPH58_RS11805;product=type II secretion system F family protein;protein_id=WP_114867231.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2805356 2805811 . + . ID=gene-LPH58_RS11810;Name=LPH58_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11810;old_locus_tag=LPH58_11810 NZ_CP087690.1 Protein Homology CDS 2805356 2805811 . + 0 ID=cds-WP_038269653.1;Parent=gene-LPH58_RS11810;Dbxref=Genbank:WP_038269653.1;Name=WP_038269653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004084597.1;locus_tag=LPH58_RS11810;product=pilin;protein_id=WP_038269653.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2807908 2808114 . - . ID=gene-LPH58_RS11815;Name=LPH58_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11815;old_locus_tag=LPH58_11815 NZ_CP087690.1 GeneMarkS-2+ CDS 2807908 2808114 . - 0 ID=cds-WP_152536555.1;Parent=gene-LPH58_RS11815;Dbxref=Genbank:WP_152536555.1;Name=WP_152536555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11815;product=hypothetical protein;protein_id=WP_152536555.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2808511 2809053 . + . ID=gene-LPH58_RS11820;Name=LPH58_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11820;old_locus_tag=LPH58_11820 NZ_CP087690.1 Protein Homology CDS 2808511 2809053 . + 0 ID=cds-WP_038269649.1;Parent=gene-LPH58_RS11820;Dbxref=Genbank:WP_038269649.1;Name=WP_038269649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337723.1;locus_tag=LPH58_RS11820;product=pilin;protein_id=WP_038269649.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2809257 2809733 . + . ID=gene-LPH58_RS11825;Name=LPH58_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11825;old_locus_tag=LPH58_11825 NZ_CP087690.1 Protein Homology CDS 2809257 2809733 . + 0 ID=cds-WP_038269647.1;Parent=gene-LPH58_RS11825;Dbxref=Genbank:WP_038269647.1;Name=WP_038269647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851240.1;locus_tag=LPH58_RS11825;product=pilin;protein_id=WP_038269647.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2810178 2810480 . + . ID=gene-LPH58_RS11830;Name=LPH58_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11830;old_locus_tag=LPH58_11830 NZ_CP087690.1 GeneMarkS-2+ CDS 2810178 2810480 . + 0 ID=cds-WP_162814113.1;Parent=gene-LPH58_RS11830;Dbxref=Genbank:WP_162814113.1;Name=WP_162814113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LPH58_RS11830;product=hypothetical protein;protein_id=WP_162814113.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2810596 2812329 . + . ID=gene-LPH58_RS11835;Name=pilB;gbkey=Gene;gene=pilB;gene_biotype=protein_coding;locus_tag=LPH58_RS11835;old_locus_tag=LPH58_11835 NZ_CP087690.1 Protein Homology CDS 2810596 2812329 . + 0 ID=cds-WP_038269643.1;Parent=gene-LPH58_RS11835;Dbxref=Genbank:WP_038269643.1;Name=WP_038269643.1;Ontology_term=GO:0009297,GO:0016887;gbkey=CDS;gene=pilB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020851241.1;locus_tag=LPH58_RS11835;product=type IV-A pilus assembly ATPase PilB;protein_id=WP_038269643.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2812421 2813833 . - . ID=gene-LPH58_RS11840;Name=LPH58_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11840;old_locus_tag=LPH58_11840 NZ_CP087690.1 Protein Homology CDS 2812421 2813833 . - 0 ID=cds-WP_038269641.1;Parent=gene-LPH58_RS11840;Dbxref=Genbank:WP_038269641.1;Name=WP_038269641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012437607.1;locus_tag=LPH58_RS11840;product=sigma-54 dependent transcriptional regulator;protein_id=WP_038269641.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2814002 2815612 . - . ID=gene-LPH58_RS11845;Name=LPH58_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11845;old_locus_tag=LPH58_11845 NZ_CP087690.1 Protein Homology CDS 2814002 2815612 . - 0 ID=cds-WP_038269639.1;Parent=gene-LPH58_RS11845;Dbxref=Genbank:WP_038269639.1;Name=WP_038269639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011348336.1;locus_tag=LPH58_RS11845;product=ATP-binding protein;protein_id=WP_038269639.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2815868 2817031 . + . ID=gene-LPH58_RS11850;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LPH58_RS11850;old_locus_tag=LPH58_11850 NZ_CP087690.1 Protein Homology CDS 2815868 2817031 . + 0 ID=cds-WP_038269637.1;Parent=gene-LPH58_RS11850;Dbxref=Genbank:WP_038269637.1;Name=WP_038269637.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010894968.1;locus_tag=LPH58_RS11850;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_038269637.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2817060 2817932 . + . ID=gene-LPH58_RS11855;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LPH58_RS11855;old_locus_tag=LPH58_11855 NZ_CP087690.1 Protein Homology CDS 2817060 2817932 . + 0 ID=cds-WP_038269635.1;Parent=gene-LPH58_RS11855;Dbxref=Genbank:WP_038269635.1;Name=WP_038269635.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002812253.1;locus_tag=LPH58_RS11855;product=succinate--CoA ligase subunit alpha;protein_id=WP_038269635.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2818192 2819544 . - . ID=gene-LPH58_RS11860;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LPH58_RS11860;old_locus_tag=LPH58_11860 NZ_CP087690.1 Protein Homology CDS 2818192 2819544 . - 0 ID=cds-WP_038269633.1;Parent=gene-LPH58_RS11860;Dbxref=Genbank:WP_038269633.1;Name=WP_038269633.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011039299.1;locus_tag=LPH58_RS11860;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_038269633.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2819541 2822255 . - . ID=gene-LPH58_RS11865;Name=LPH58_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LPH58_RS11865;old_locus_tag=LPH58_11865 NZ_CP087690.1 Protein Homology CDS 2819541 2822255 . - 0 ID=cds-WP_038269631.1;Parent=gene-LPH58_RS11865;Dbxref=Genbank:WP_038269631.1;Name=WP_038269631.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004085096.1;locus_tag=LPH58_RS11865;product=polysaccharide deacetylase family protein;protein_id=WP_038269631.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2822344 2824035 . - . ID=gene-LPH58_RS11870;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LPH58_RS11870;old_locus_tag=LPH58_11870 NZ_CP087690.1 Protein Homology CDS 2822344 2824035 . - 0 ID=cds-WP_038269630.1;Parent=gene-LPH58_RS11870;Dbxref=Genbank:WP_038269630.1;Name=WP_038269630.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004087831.1;locus_tag=LPH58_RS11870;product=membrane protein insertase YidC;protein_id=WP_038269630.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2824079 2824537 . - . ID=gene-LPH58_RS11875;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LPH58_RS11875;old_locus_tag=LPH58_11875 NZ_CP087690.1 Protein Homology CDS 2824079 2824537 . - 0 ID=cds-WP_081755381.1;Parent=gene-LPH58_RS11875;Dbxref=Genbank:WP_081755381.1;Name=WP_081755381.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:NF013022.2;locus_tag=LPH58_RS11875;product=ribonuclease P protein component;protein_id=WP_081755381.1;transl_table=11 NZ_CP087690.1 RefSeq gene 2824545 2824685 . - . ID=gene-LPH58_RS11880;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LPH58_RS11880;old_locus_tag=LPH58_11880 NZ_CP087690.1 Protein Homology CDS 2824545 2824685 . - 0 ID=cds-WP_038269628.1;Parent=gene-LPH58_RS11880;Dbxref=Genbank:WP_038269628.1;Name=WP_038269628.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404565.1;locus_tag=LPH58_RS11880;product=50S ribosomal protein L34;protein_id=WP_038269628.1;transl_table=11 ###