LPH40_RS00070    7720 ..    7733 +  -4.5    -3.794   GAACGATATCGACCT               GCTGC CAAC GTAGC                TTTAATACATTGGCC  59 341
LPH40_RS00080 NONE
LPH40_RS00085    9320 ..    9331 +  -5.8  -2.70932   CCCCTTAAACACCCC                CTGG GCAT CCAG                 TCCTTCACCGCCAGA  48 363
        aspS   18912 ..   18925 +  -2.3   -3.4914   GCCATCGGACGCAAT               GCTGT CATC ACCGC                TTCATATTGTGTTTT  47 96
         xth   28711 ..   28726 +  -6.1  -2.73701   AGGCGAATGGGATCT              GCGTG ACCGAC CACGC               CTTGATTTCATGCAA  51 311
LPH40_RS00185   29510 ..   29533 +  -3.7  -3.60048   TTAATAGCCTGCTGC          TGGGTGCCC GATATA GGGCTCTCG           ATTTTTTACCGGGGC  50 171
        rsmG   30196 ..   30230 +  -4.9  -3.16071   AACGCGGCACTTGGT    GGTCGTGCGG-AAGGG ATAG CGCTTACCGCACATCC     TCTGTTGATGTCGCC  50 7
LPH40_RS00220   37320 ..   37343 + -13.2  -3.90291   TCCGTAGTAAAACGA          TTGGGACGGC TGAG GTCGTCCCAA           TTTCATTAGCACGCT  95 57
         dcp   40865 ..   40892 + -12.1   -4.1851   CCTGTGTGTTCAGCA        GAACGAGGTGG CATCGT CCATCTCGTTC         TTATTTCTAATTTGC  95 46
        folC NONE
LPH40_RS00240   44697 ..   44713 +  -3.7  -3.35465   GCATTATCGGTATGG              TCAGG TCACATC CCTGA              TTACTGTCTCTCCCT  48 9
LPH40_RS00245   45310 ..   45320 +  -3.2  -2.63596   GATTGCCAGTATCCG                 GTGA TAA TCGC                 TGATATCCAGTCCAA  42 12
        purF   47376 ..   47390 +  -4.4  -2.78935   GAATCATAGCTAGTC               TAAAAA TTC TTTTTA               TCTAGTAGGCAGTCT  45 478
        gshB NONE
LPH40_RS00290   60141 ..   60155 +  -3.6  -4.91852   TCAAACAGATTCGAT               TCTTTT CAA GAAAGA               TTTATTTTTAATAGC  73 289
LPH40_RS00295   61197 ..   61208 +  -4.4    -3.727   CGGTAATGGAATAAG                TGCT GATA AGCA                 TTTCGGTATCCTGCA  55 152
LPH40_RS00330   69498 ..   69531 +  -2.3  -4.14739   ATCGCACCTGAAATG     AGCACGCT-GTTGACC GGG GGTTTCCCAGCGTGCG     TTTTCGAGTCACTGC  57 482
LPH40_RS00365   73925 ..   73949 +  -3.5  -3.17392   CACCTGCATCACTAT          CGATGTCTCTC TAT GGGAAACATCA          TTCACTTGGAGAATG  46 177
        purH   76569 ..   76597 +  -5.4   -3.4285   GTCTTCACCGGGGTG       CGCCATTTCCG GCACTGAA CGGAAATG-CG        TTATGGCTTGGATGG  54 8
        purD   79218 ..   79239 + -11.5  -4.72846   GTTTGTTGTCGGGGT           CACCCGCTC AGGC GAGCGGGCG            TTTTTCACTCTGTCC 100 470
LPH40_RS00390   80173 ..   80214 +  -3.7  -3.08679   CCAATCTTCAAAAGG ATTCATCCAGGATGAAAGCG CTG CGCTTGC-TGCTGGAGGAAA TATTGGCTCGCCGCC  45 11
LPH40_RS00395 NONE
        yccS   83270 ..   83286 +  -4.3  -3.98159   AACCGTCGGTGCTCC              ACGGTCA GAC TGGCCGG              TTTACTATTGTCATG  60 308
        folE   91978 ..   91992 +    -7  -2.75992   CTTATAAATGAACCC               GCCCGC ATC GCCGGC               TACTGTTCCCTCCGC  57 54
LPH40_RS00430   93535 ..   93552 +  -2.7  -3.33696   ACCACCACAGATTCC             TCCA-CAC CGC GTGATGGG             TTACTTGCACACGCC  47 362
LPH40_RS00450 NONE
LPH40_RS00455 NONE
LPH40_RS00460 NONE
LPH40_RS00465  101183 ..  101199 +  -2.9  -3.07895   TGGAGCCGGAGTGAA              CGCATGT TGG ACGTGCA              TATATTGACCCTGCC  43 27
LPH40_RS00470  101702 ..  101716 +  -2.1  -2.56596   CGCGAACTGATACAG              GCC-TG GGGA CATGGC               TAACTTACTGGCCGA  39 8
LPH40_RS00475 NONE
LPH40_RS00480  103164 ..  103181 +  -4.8  -3.86822   CCGCTCAACCCGCGG             GGCGTT AGGAGC AGCGCC              TTTATCGGCACCTTA  59 141
LPH40_RS00485 NONE
LPH40_RS00490 NONE
LPH40_RS00495 NONE
LPH40_RS00500  105188 ..  105204 +  -2.1   -4.4017   TCTCATCCCTTAGCG              AGCCATG TTC CAAGGCA              TTTTCTGGCACTTCA  61 398
LPH40_RS00505  106121 ..  106136 +  -8.2  -3.14564   CACCTTGATTGATGA              GGGCGC AAGC GTGCCC               TTCATCGCACGCTAC  64 245
LPH40_RS00515  109761 ..  109771 +  -2.6  -3.70553   TTAGTGACCTTTTAC                 TTTT TTA AAAA                 TTATCTGTTACGTTA  51 335
LPH40_RS00530  112645 ..  112658 +  -2.4   -5.0538   ATAATTAAACTTGAC               TCAG CGGCAT CTGA                TTTTTTCCACTGAGA  75 498
LPH40_RS00540  114852 ..  114863 +  -5.8  -3.05596   TGGCCGCCATGCGGC                TGGG TTAT CCCA                 TTGACTAAAAACCTC  53 6
LPH40_RS00545 NONE
         ppa  117800 ..  117811 +  -5.8  -2.72511   CATACTCACCAGCCA                GGCT CGAA AGCC                 CTTTCAAGGGATGCA  51 50
LPH40_RS00560  121108 ..  121120 +  -4.7  -3.60865   GAGCCATCTGCCGCG                CTGCG GTA CGCTG                TTCTGCTTTGCGCTG  55 63
        leuS  123863 ..  123875 +  -5.5  -2.92463   TCCCATATCGGCGTC                TCCTC CAA GAGGG                TCTCTCAATGATCAA  51 95
        lptE NONE
        holA NONE
        nadD NONE
        rsfS  127143 ..  127153 +  -6.8  -4.56597   GCCGCTACACCCGTT                 GCGT GGC ACGC                 TTTTTGAAAACAGCC  77 490
        mltB NONE
LPH40_RS00600  130240 ..  130278 +  -9.1  -2.99471   CCGTCCACAAATCGT  TG-GCCTATGATCGATCGA TAC TGGATCGA-CATAGGCGCA  TGTCTATCCAGCTCC  66 16
LPH40_RS00615 NONE
LPH40_RS00745 NONE
LPH40_RS00750  160411 ..  160428 +  -8.3  -3.74762   CACTTTGACGTGGTC             GGCGTCC ATCT GGCCGCC              TTCTTGGTGGATGTT  71 466
LPH40_RS00845  181164 ..  181181 +  -3.3  -2.76171   GCCCAATTGGCCCGG             CGCTATG GTGA CAAGGCG              TGATGTTGCCTGAAT  43 15
LPH40_RS00850 NONE
LPH40_RS11920  181872 ..  181896 +  -2.1  -3.08032   CTGTGATATAGGCTT          TTTTTGATCTC ACG GAGAACAGGAG          TGATTTTGAAAAGCC  42 57
LPH40_RS00855  183237 ..  183255 +  -3.1  -3.40611   ATCTTGTTTATCAGA             TCTATGG GTTAG CCTTAGA             TATTCTTCAAGTGGC  47 120
        prmA NONE
LPH40_RS00865 NONE
LPH40_RS00870  185729 ..  185743 +  -3.5  -4.99947   GGTTATTTTGCAAGG               CGCTT GCAGA AGGCG               TTTTGTTTGATTCCC  73 51
        yeiP  187090 ..  187128 +  -2.2  -5.14563   GACCTCACGCATCAA   TGCAATCTCAGCCGCGCT GCG AGTGCTGCCGAGGTAGGG   TTTTTTGATCAGGCC  75 240
        serA  189936 ..  189949 +  -3.1  -3.17075   TCGCGAAGCTTTGCA               T-CGGC AAC GCCGCA               TTCGATTGCAGCACC  45 131
LPH40_RS00890  191781 ..  191803 + -16.3  -3.87583   ACGATCACACCTCAG           GAGGCCGGC CAAGC GCCGGCCTC           TTTACATTTCACTTT 100 41
LPH40_RS00895 NONE
LPH40_RS00900  193953 ..  193965 +  -2.7  -2.75022   TTACGTGGACATCTT                TGAGT CCC ACTTA                CTTGTCTATGGAACC  42 23
LPH40_RS00905 NONE
        mtnC  195249 ..  195264 +  -4.6  -2.73364   AAGCTTCGCACAACT              GCCCTT CTAA ACGGGC               TCATTGCGGTCACAG  46 16
LPH40_RS00925  197500 ..  197512 +  -7.7  -2.84878   ATCCATCGGATACTT                GGTTC ACT GAACC                CTTTGCATTGACGGG  59 143
LPH40_RS00930  198520 ..  198538 +    -3  -3.21595   CAGTGTTGCCGGACT             CCCTCAGC GCC GCTCAGCG             TTAATGATCCGCATT  45 3
LPH40_RS01050  231538 ..  231567 + -12.8  -2.74263   GTACCCATTGATACA       AGC-GGCGGCGGG ACAAC CCCGCCGCCTGCC       ATTTAGCACTCCGCT  81 54
        rpoE NONE
LPH40_RS01075  234721 ..  234738 +  -4.7  -3.70478   TTGTATTTCTACTCA             CCGGTGT AGTT GCCCCGG              TTTGGATCCCTTTGT  57 77
LPH40_RS01080 NONE
        lepA NONE
        lepB  239219 ..  239232 +  -4.5  -2.64099   TTGAATGAAAGTTGC               TCCCT ACCA GGGGA                ATTCTAGTGAGGCAC  46 37
LPH40_RS01095  239579 ..  239590 +  -4.4  -2.63596   CGATACCGAGCAGGA                CTTG ACAT CAAG                 TGCTATCAAGTAAGA  44 1
         rnc NONE
         era  241367 ..  241377 +  -2.4  -4.29304   ACGCTCATAACCGCT                 TGGG TAT CCCC                 TTTCTCTTATGCTCA  57 226
        recO  242459 ..  242469 +  -5.4  -3.10796   AACCAGCCCCACCAG                 CAAC CAC GTTG                 TCTTCGATCGTGACA  50 352
LPH40_RS01120  245411 ..  245429 +  -5.2  -3.29096   ATTTCTGCATCGACA             TGCTTCGA TGA TCGCAGCG             TTGCTCATTGCTCCA  54 230
         acs  250295 ..  250317 +    -4  -3.18264   ACTGACAAATCCACG           GGACGGGATC CAC GATCATGCCC           TTAATCCCTGACAGG  48 36
LPH40_RS01140  252042 ..  252057 +  -2.6   -4.2679   GACTGAAGCTTTGTT              TTAGGA GGTC TCTTAA               TTTTAATACCGCTTG  59 194
LPH40_RS01155  255721 ..  255737 +  -7.3  -4.37211   GAAATTAACGCGTTC              CATTGAG ATA CTCGATG              TTTATTATGCATTTA  76 258
LPH40_RS01160  258928 ..  258957 +  -5.7  -2.72049   CCCAACGAGGCCGTG       CATGACATCGCACG CCT CGCGCAA-GTCATG       TCATTGACCGATGTA  51 485
        glpD  266783 ..  266799 +  -2.9  -3.61178   ATCGATCACACCACC              CACCATA CAC TGAGGTG              TTTCAGCTACATGAA  49 59
LPH40_RS01180 NONE
        glpK  269688 ..  269701 +  -3.7  -2.83519   AATATGCAGGGCCAT               GGCGC TACA GCACC                TCGTCTATTTCTCAG  43 495
        metE NONE
LPH40_RS01205  275771 ..  275785 +  -5.7  -2.96695   CGTCGCGCTGATCGT               GGTTG ATCTG CAACC               TGATTTCATACCCGG  53 76
LPH40_RS01260  288881 ..  288891 +  -5.4  -4.45168   CGCGATGACATTGCT                 CACA GGT TGTG                 TTTGTATTTTCACGC  69 209
LPH40_RS01280  295285 ..  295305 +  -2.4   -2.9632   TCGGTAGCAATAGTA            ACCATGCC ATATG GGCTTGGG            CTTCTTTCACGCTTT  41 366
LPH40_RS01300  301016 ..  301032 +  -2.9  -3.85698   TCTGGGCTGGTCGGA              GCGTGAT TTC GTCACGA              TTTCTCAGCACCAGA  54 109
LPH40_RS01320  305644 ..  305658 +  -2.8  -5.02476   CTTGGTGATACCAGC               TTGGAA TAT TTCCAC               TTTTTTAAAGGCTCT  74 143
LPH40_RS01325 NONE
LPH40_RS01370 NONE
LPH40_RS01375 NONE
LPH40_RS01380  321226 ..  321236 +    -4  -2.57092   ATGTCTATTCTCTTC                 TCAA TCC TTGA                 TGCATTAATGCCGTT  44 161
LPH40_RS01385  322966 ..  322981 +  -3.2   -3.4072   CTTGTAAGCACGCTT              GGCG ATCACCGC CGCC               TTCTCATAGCCAATG  48 372
        purB  326534 ..  326558 +  -2.9  -2.87211   TCTTCCTACGATGGA          GATGCTC AACAGCAGAAC GAGCATC          TCTGTACAACAACAT  42 486
LPH40_RS01400  328147 ..  328162 +  -2.6  -2.92463   AGGTCAAACGTCACT              GCA-ATG GAT CATGTGC              TATATGCGTCATCAG  43 283
LPH40_RS01405 NONE
        sucB  333535 ..  333551 +  -2.9  -3.28712   AGTTGGAAACACCCG              GACGGAT GCT ATTCGAC              TTATAAGGAAGGCAC  47 3
        lpdA  335452 ..  335482 +  -9.8  -5.71295   AGTATCTCCTCATCA       GGCATCGCTC TACAGACTCCC GAGCGATGCC       TTTTTGTTTTTATCT 100 50
LPH40_RS01425  340524 ..  340535 +  -2.2  -3.64259   GAATACAGGTTCATA                TTGC TACT GCAG                 TTCTTCCAAATCATT  50 404
        speD  344558 ..  344584 +  -2.3  -2.81727   CCATTGCCACTGGAA        TCGGTG-ACG GCAACAAG CGTGCACCGG         CTTGTTCAGCTTGTT  39 338
        rplM NONE
        rpsI  346216 ..  346240 + -11.5  -4.08692   GTGAAGAATAAAAGC          GGCACCTCA CCTTATT TGAGGTGCC          TTTTGAGGCGACTTA  91 96
        prmC  384486 ..  384499 +  -4.5  -3.13403   GTGACCGTATCACCG               TGGGG CGCT CTCCA                TATTCCTAAGACGGC  50 3
LPH40_RS01585 NONE
         pip NONE
LPH40_RS01620 NONE
         gmk NONE
        rpoZ  394066 ..  394090 +  -9.4   -3.4878   CTAGTAATGCATTAC         GGGGAGTATTG TCGT CAA-ACTCCCC          TTAGTTGTCGTGTAA  71 202
LPH40_RS01645  400205 ..  400230 +  -3.9  -3.34895   ATCCCAGCGACACAT         CGCGACGATTT CACC AGAGCATCGCG          TTCCTTCCCCCTCCA  50 89
        cysI NONE
LPH40_RS01655  403164 ..  403174 +  -4.6  -3.57144   ATGCTTGGTATTCCA                 CCCG TTA TGGG                 TTTCCCGATAGCCGG  55 490
LPH40_RS01670 NONE
LPH40_RS01675  407326 ..  407339 +  -6.7  -3.61178   CAGACATTCCCAAGC               CCTGA TCAA TCAGG                TTTACCATAGATAGG  61 21
LPH40_RS01680  408407 ..  408425 +  -4.5  -3.14211   ATGGAGTGCATCGGC             GATGGCA AAGCA TGCCAAC             TTCATAGCCGGGGAT  50 168
LPH40_RS01690  411166 ..  411181 +    -4  -3.07935   TTGAAACTGAAAAAA              TCTCAA AAAA TTGAGG               TTCAATCGATACGAT  47 390
LPH40_RS01705  415534 ..  415551 +  -6.3  -4.09685   GTCGAGCACGAACAA             GTGAGGA TAAA TCTTCAC              TTTTGGGAAATGAGC  66 443
LPH40_RS01725 NONE
LPH40_RS01740  425720 ..  425738 +  -8.2  -3.62046   TTCGCAAAACGAAAC             TTGGTGCA TCC TGCACTAA             TTATTAGAAACATCA  71 213
LPH40_RS01775 NONE
        sufB NONE
        sufC  435839 ..  435853 +  -2.8  -3.05463   CACCGACGGTCCCAG               CACC CCGGGAA GGTG               TTCGATGAGCACCCT  43 3
        sufD NONE
LPH40_RS01795 NONE
LPH40_RS01800 NONE
LPH40_RS01805 NONE
LPH40_RS01810  442126 ..  442136 +  -6.8   -2.7127   CACACGTCCCCGGCC                 CTGC ACC GCAG                 CTTGTGCTTCAATCA  50 278
LPH40_RS01835  446192 ..  446215 +  -7.5  -3.57263   CAGCCGCATTACGGA          CCA-CACCGT CAATC ACGGTGATGG          TTTCACCATAGAGAT  63 289
LPH40_RS01865 NONE
        trxB  468969 ..  468981 +  -3.4  -3.61398   CTTCTACAATAACGG                CATC CAAAC GATG                TTGTTCACCGCCGGA  50 436
LPH40_RS01940  470136 ..  470153 +  -4.1   -2.8937   CCGTTCCGTAGAGAC             TGAACGA TCAC TCGTGCA              TCTATACCCCTATCT  45 23
         aat  470953 ..  470976 +  -8.8  -2.52464   CGTAGGATATTTGCC          CTTGGCGGCCC GCC GGGCCGC-ATG          TGGATTGCACACAGG  60 98
        infA NONE
LPH40_RS01965 NONE
        mnmA  476039 ..  476055 +  -4.5  -2.79915   AGCTGGCGTGTAATC              TTTTCAA AAC TTGAGAA              TGTGCTGCAATGAAT  47 12
        hflD  476860 ..  476873 +  -3.8  -3.91911   TACTCAAACCACCTA               GGGT AGGATC ACCC                TTTGCTTACAATACG  57 206
LPH40_RS01980  478007 ..  478028 +  -4.3  -3.00946   ACCCGAAAGCCGATT           TGGCATCAG CAAG CTGACGCCC            TCGTTTATGCGAAAC  47 514
        yihA  482044 ..  482055 +    -3  -3.65902   GCGCACAAGCTCATC                TCAA CCCA TTGA                 TTTACATAAAATAAA  51 45
LPH40_RS02005  483777 ..  483801 +  -4.2  -3.29144   CCCTTCTCAATCAAT          CACAGCCGAA CCATT TTCGGATGCG          TTCTACACAACATGC  50 213
LPH40_RS02020 NONE
        xerD  487555 ..  487565 +    -4  -4.77698   GATGCAGCATCCAGC                 TTGT GAG ACAA                 TTTCTTTTAATGTTC  71 116
LPH40_RS02030  488536 ..  488557 +  -3.7  -3.68341   ACGCCACGAATGCGT           GCGGGTACAA TGC TTG-GCTCGC           TTCTTCAATACGGTT  53 177
        purL  492718 ..  492728 +  -3.2  -3.09004   GCAGATGCTCACCAC                 CTGT GCA GCAG                 TCATTTTCGCAATGC  45 188
LPH40_RS02055 NONE
LPH40_RS02060  496934 ..  496968 +  -2.8  -3.31792   ACAAAGTCGACGCCC     TACTGCGAAAATTCGT GCG ATGAGTTGGCGCAGCA     TTCTCAACATCATGC  47 3
        lptC NONE
        lptA NONE
        lptB  498756 ..  498772 +  -2.9  -3.56558   ACTTTTCACCTCTGA              TCGGCAT GCA ACGCTGA              TTATAGTTAGTATTA  49 26
LPH40_RS02080  500167 ..  500182 +  -6.8  -2.94416   TCTCACGAACGCGTC              CGGGTC CTCT GATCCG               TCTATCATCGGCGTC  55 14
        raiA NONE
        hprK NONE
        rapZ  502994 ..  503013 +  -2.8  -3.02144   TGCCCACACAACATT            GCT-CGCCA AGA TGGCTCAGC            TATTACCCAAAGTCC  43 296
LPH40_RS02100 NONE
LPH40_RS02105 NONE
        ptsP  506141 ..  506160 +  -2.8  -3.01924   GAATAATGTCAGTAC            TGATGCTG GTTT CGTCATCA             TATTGACAGAGCATA  43 35
        mgtE  507779 ..  507790 +  -4.4  -2.70932   GAACACTGAAAGATC                GTTC TCAC GAAC                 TCATTCAGAAAAAAA  44 201
        gloA  508766 ..  508779 +  -5.2    -3.737   CTCGCTGAATTCCCA               GGGC ACCTCA GCCC                TTTGCTAACCCCTTG  59 156
LPH40_RS02135  513405 ..  513415 +  -3.2  -3.33525   ATGCCATTGCATTGA                 TGCG TGC TGCA                 TATTATGTCACTCAC  48 240
LPH40_RS02140  515215 ..  515245 +  -5.2  -3.53811   TTCCATAATTTGTAC       CGGTCACGCTGGCC TTC GGCCTGACTGACAG       TTTGAGCACAATGCA  56 237
LPH40_RS02145  515606 ..  515616 +  -2.4  -3.55444   CCCAATGCACCCTAT                 CCCG CAT CGGA                 TTTCAGACATGAGGA  47 92
LPH40_RS02150  516978 ..  516988 +  -5.4  -3.85698   CCATGGATCGCGACT                 CTGT CAC ACAG                 TTTCTGAGCCACGAC  61 8
LPH40_RS02155 NONE
LPH40_RS02160  518329 ..  518339 +  -2.4  -3.07935   CTGACCGTCCTGCTC                 GCCC TAA GCGC                 TTGCGTGCATCAGAT  42 61
LPH40_RS02165  519924 ..  519935 +  -5.8  -4.06678   AACCTATGCACTTGG                CGAC TATC GTCG                 TTTATCTGGATGGAT  66 316
LPH40_RS02175  522266 ..  522278 +  -4.8  -2.82516   CTCATCCTGAACAAA                GTGC AGGAA GCAC                TCTCATCCTGCAACA  47 232
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD  526891 ..  526911 + -10.4  -5.55698   TACCACATACTAAAA           GGCCGCAGG TGAT CC-GCGGCC            TTTTTTTCGGTTGTC 100 49
LPH40_RS02205  532826 ..  532850 +   -10  -4.15222   CACCTTAGCCGCCCC          TCAGCGCAGC CAACC GCTGCGCTAA          TTTCTTAGCCGAAAT  83 33
LPH40_RS02215  537944 ..  537972 +  -9.5  -2.67708   CCATCCACTTACTCA        GAGTGTGCAGCAC CCA GCGCCGTACACTC        TGCTGTGGTCACTTT  66 104
        recQ  539957 ..  539970 +  -3.8  -3.28712   AGATACACTCCTCGA               CAGG AATCGC CCTG                TTCTACCAGAACCCG  50 116
LPH40_RS02225  540444 ..  540460 +  -2.1  -2.90901   CGGCCTCCACAGACT              GCATCCA GTG TGGTAGC              TGTGCTTGCCGGTAT  40 10
LPH40_RS02235  541382 ..  541400 + -10.2  -3.05963   AATTGATGGCATCTG             TGCCTGGG CAG CCCTGGCA             TGTTCGCGTGCGCGT  68 262
        radA NONE
LPH40_RS02250  544052 ..  544074 +  -2.6   -3.3353   TCACCCAGAATAACC           CTAGCGATAG TGA CGCTCGTTAG           TATATTTCTCACAGG  47 55
LPH40_RS02305  555715 ..  555726 +  -5.8  -3.61715   TCCGCCACGGTCACC                CGGT CGTC ACCG                 TTATTGAAGAGGATG  58 350
LPH40_RS02385  569949 ..  569978 +  -2.1  -2.95102   TCTCATGTCGCTGAA       TCATTCAAAGCACG CGA CGCGCCT-GGATGA       ATTTATGACTCCAGT  42 491
LPH40_RS02400 NONE
LPH40_RS02405  573397 ..  573410 +  -6.7  -2.79302   GCGTTCCATGCAGAT               GTCTG TAAG CAGAC                TATCATCCAGGTCAT  54 102
LPH40_RS02415  575618 ..  575654 +  -8.7  -2.72799   CAATAAGCTGTCGCG    GATGGTCTCTGGCATAG GCT CAATGCCAGACGCGATC    TAGTCTGTATCCGCA  61 199
LPH40_RS02420  576740 ..  576755 +  -7.6  -2.55213   CGTGATCACCGTGGA              GACATC CTTG GATGTC               TAGATTGCGTCGCTA  57 382
LPH40_RS02445  580223 ..  580258 + -11.1  -2.91264   CGCCTCTTACACGCA    TGACGACGCCGGTTC CATGCA GAACCGACGCCGTCG     TATGTAGCTCCAAGC  74 45
LPH40_RS02450  581467 ..  581477 +  -4.6  -3.63515   TCACTTCGGTGAGGT                 GCGG GAA TCGC                 TTATTGCCAATCCCC  57 334
LPH40_RS02455 NONE
LPH40_RS02460  583374 ..  583391 +  -4.1  -3.61922   TCAGTCAAAAACAAA             CCCG-CCA CGG TGGATGGG             TTTGCGGTCGGTGTT  55 298
        thiD  589424 ..  589438 + -11.4  -4.08216   CCAAGCGAAGCAACG               CAGCCG TTT CGGCTG               TTTTACAGAACATCA  91 156
LPH40_RS02510 NONE
        groL  597509 ..  597526 + -10.5  -6.02919   GTATTTATCGAAAAA             GCCCTGC TGAC GCGGGGC              TTTTTTTCTTTATGC 100 58
LPH40_RS02585 NONE
LPH40_RS02590 NONE
LPH40_RS02595 NONE
LPH40_RS02600 NONE
LPH40_RS02605 NONE
LPH40_RS02610 NONE
LPH40_RS02615 NONE
LPH40_RS02625 NONE
LPH40_RS02630 NONE
LPH40_RS02635 NONE
        purM  630618 ..  630632 +  -2.8  -4.17355   TCCACCACATCAGCT               GCCA CTGTGCT TGGC               TATTTTTTCCCCTTC  59 60
        purN NONE
LPH40_RS02665 NONE
LPH40_RS02670  633202 ..  633213 +  -2.2  -2.94232   CACGGATCAGCTTTA                G-GGC CAC GCCAC                ATTGTTTGCAGCAGC  42 281
LPH40_RS02680  637627 ..  637643 +  -2.2  -3.30124   CAAGGACCTGATGCA              CTGTAC ATTCC GCACAG              TTCTCAGCGATGCAC  45 480
        fabA  638812 ..  638832 +  -6.1  -2.78018   TCTGTGCATCGCCCA            TCAGCAACA CAG TGATGCTGG            TCATTGCTAGACAAT  52 151
        ttcA NONE
        rdgC NONE
LPH40_RS02700  643021 ..  643035 +  -5.6  -3.30507   ACCCAGCCCGCCACA               CCGAGG CAA CCTGGG               TCTATTTCGATTCCT  54 132
LPH40_RS02710 NONE
LPH40_RS02715  645554 ..  645579 +  -2.6  -3.15638   CAGGATCGCGGTAAA         CACTG-AAACG CAGGC CGTTTGCCGTG         TTCGATATCGGTTTT  45 20
        tatB NONE
        tatC  647233 ..  647253 +  -6.8  -3.85698   TGGATGTCATCCGGA            CCAAGCTG CACAC CAGCCTGG            TTTATCCCAAACAAC  63 522
         azu  650438 ..  650454 +  -2.2  -2.77899   GCAAGGAGAACAAGG              TGATGG AAATA CCATCC              TCATTGATAACGGCA  40 68
        rsmI  656046 ..  656072 +  -5.8  -2.52464   GATGCATGACTTCTT         TCCATTGCCG ATCGCTG CGGCGCTGGA         TCGATTGGCACCAGG  50 451
LPH40_RS02765  659836 ..  659859 +   -16  -3.34398   CACCTTGGCATACAC          CAGGGGCCGG CTTG CCGGCCCTTG           TCTTTGGGGAGGCAC 100 50
        metG  662146 ..  662173 +  -5.5  -3.01791   CAGCTCTGCCCCTCT        CGGATGTCTGC TTCCCC GCATCCATCCG         TGTTCGACACCGCAT  51 110
        rnfB NONE
LPH40_RS02785  664279 ..  664293 +   -10  -3.33696   GAGACCAGCCGCCTT               GCGCAA CCG TTGCGC               TTCATTCCGAACCCC  73 142
LPH40_RS02805  667681 ..  667695 +  -7.2  -3.14132   CTCAGAATACTAACG               TTGCTT ATC AAGCAA               TTGGTGACGAACCGC  60 100
LPH40_RS02885  689276 ..  689292 +  -4.4  -3.60048   GAAACTCCCAGTCCA              CGTTGT AGCCC GCAACG              CTTTTTTAAAGCCGC  52 419
        moeB  690912 ..  690934 +  -5.5  -3.37612   CTCCCGAGGCATACA           TGGGGCTGG CACAA TCGGCCTCA           TTGCTTGCGCTTCAC  54 226
         gap  702109 ..  702121 +  -5.5  -3.78312   CTGGCTATATACCAT                GTGCT TGC AGCGC                TTTCCTGGGTAGTTT  59 276
LPH40_RS02955 NONE
        pilH  708666 ..  708678 +  -3.3  -2.78384   TAATACTCAAATCCA                CCCTA AAG TTGGG                TCTGATAAGCGGCAG  43 470
        pssA NONE
LPH40_RS02990 NONE
        rimI  716004 ..  716017 +  -2.3  -3.28791   CCATGCAAATATCCA               GCCTG CGCA CATGC                TTCTACAACCAACGT  45 366
        rpsU  724489 ..  724511 +    -7  -5.80817   GGCGTTCCGCGATAG          CCGG-CACG CGCAAT CGTGACCGG           TTTTTTTGTGTTGCC 100 110
LPH40_RS03035  725022 ..  725035 +  -3.8  -2.91264   ACAAATCTCTGCACT               GGTG AAAAAA CACC                TGTCTCACTAAGCCC  45 1
LPH40_RS03040  726287 ..  726297 +  -2.4  -3.14132   GATGCCAACAAACAT                 CACG GAC CGCG                 TTCCTGAACCAAACA  43 82
        dnaG NONE
LPH40_RS03075 NONE
LPH40_RS03080 NONE
        mlaD NONE
LPH40_RS03090 NONE
LPH40_RS03095 NONE
LPH40_RS03100  744656 ..  744668 +  -3.4  -4.63218   AGGATCGTGACACTG                CACA ACGCA TGTG                TTTTCTTACCAGCCA  66 370
LPH40_RS03120  750584 ..  750604 +  -8.3  -2.81072   GACACTTGATGACAC            CACATGCGT CAG ATGCGTGTG            CTTCTCTTCACTCAC  62 418
LPH40_RS03125 NONE
LPH40_RS03130  752506 ..  752516 +  -2.4  -4.07568   GGAAAACGTGGCAAA                 CAGG CCG CCCG                 TTTTGACCACGCCCA  56 186
LPH40_RS03140  754718 ..  754734 +  -7.2  -2.73771   ACAACGCTGATCTCA              GCTCCG GTCAA CGGGGC              GTTTCAGCCGTATGG  56 31
LPH40_RS03170  764105 ..  764119 +  -4.2  -3.17051   TCATCGTTACTATTC               TCCTGC TTG GCACGA               TATTGCTCGTCACCC  48 173
LPH40_RS03175 NONE
LPH40_RS03180  766350 ..  766372 +  -3.4  -3.40498   TGACAATATCCAATT           GCATTTCAAT CCA ATCGATATGC           TCTTCTTCAGAATTG  48 89
LPH40_RS03200  767953 ..  767963 +  -3.2  -2.66869   GAAATTGCAAGTGCA                 GGGT AAT ACTC                 TCGGTTCTTGCGTCT  42 51
LPH40_RS03205 NONE
LPH40_RS03245  783641 ..  783661 +  -4.7  -3.03124   GGAAATATGGAATAG            CGGTTTGCT CCC AGTGAATCG            TCTTGGCGGATCAGC  49 470
LPH40_RS03260 NONE
        thiE  788959 ..  788984 +  -6.1  -4.07568   TATTCCACCCACCAC         CGGATGTGCCGA TAG TCGGCGAA-CCG         TTTTGGGGACGCACC  66 510
LPH40_RS03285  791472 ..  791488 +  -3.7  -4.41353   GAATGCTTGTCTTGA              GGATG GCGTTTA CATCC              TTTTGATCTATGTGG  63 302
LPH40_RS03290  794285 ..  794307 + -14.9    -5.186   CCTGTGACATCATGG           GTGCCCGGT ATGTG ACCGGGCAC           TTTTTCTGTGTTTTG 100 241
LPH40_RS03295  796278 ..  796300 + -14.9  -5.59962   CCTGTTACATCATGA           GTGCCCGGT ACGTG ACCGGGCAC           TTTTTCTTTATTTTG 100 249
LPH40_RS03310  798925 ..  798936 +  -4.4  -3.68619   GTGGATAGTGGGTTG                CAAG GTAC CTTG                 TTTGACTCAGTTGGG  55 248
LPH40_RS03315  800684 ..  800704 +  -6.8  -3.17723   TGGTACGTGTATCTT            TGCGGGAC TCTCC GTCACGCA            TTAGCTTAAGAGTGC  57 86
LPH40_RS03320  801939 ..  801981 + -16.5  -4.42806   ATCAGAATTCGACTT CTCCTGGATTCGCTTGCTGT TGTC AC-GTGAGCGAATCCAGGGG TTTCTTTAAAACTGA 100 91
LPH40_RS03330  806933 ..  806959 +  -2.2   -4.3739   GTGATGGTGCTAGCT         GTGATCAAAATG CTG CGTGTTGTTCGC         TTTTATCCACGGGTG  61 205
        pilM NONE
LPH40_RS03345 NONE
LPH40_RS03350 NONE
LPH40_RS03355  813958 ..  813968 +  -5.4   -3.2115   CGACCAGCCGCACTT                 TCGT TCG ACGA                 TTAATGACTGATTTA  52 11
LPH40_RS03360  815888 ..  815906 +  -5.2  -3.29324   ACTGCCACTTGCTTT             CTGTCGTC TCT GACGGCAA             TTCGGTTTCAGTCCA  54 49
LPH40_RS03365 NONE
LPH40_RS03370  819938 ..  819958 +  -9.1  -2.71712   AATCGGTCATGGAAC            GCATAGAAG CAT CTTTTATGC            ATTTCAAAAGAAGCA  63 505
LPH40_RS03395  829082 ..  829093 +  -4.4  -3.02649   CAGGCAGGTCGTCAA                CACA ATCC TGTG                 TATGTGTGATGCCCT  47 370
LPH40_RS03400  831611 ..  831632 +  -4.3  -3.94846   AACCTGACAGCAAAA           CTCGTTAGG GTTA CCTATCGTG            TTTACATTTTCATGC  57 317
LPH40_RS03405  835891 ..  835916 + -15.5  -3.07236   AGTGTGGCTCCATAG         CGAAGCCTGGC TAAT GCCAGGCTTTG          TCTTGACATGACTTT 100 51
LPH40_RS03410  837937 ..  837967 +    -4  -2.69964   GACCAGTCACTGCGG       TAACAACCAGAAAC AAA GTTTACGGTTGTCA       TGATGTGATTACAGC  44 97
        rlmH  842594 ..  842607 +  -5.3  -3.13899   ACTGTAGCAATCTAA               CACTT ATTA AAGTG                TCTTAATAGACGATT  52 446
LPH40_RS03440  847012 ..  847026 +  -2.8  -4.08945   AACACACCAAACCAT               TCGATT ACA AAGCGA               TTTTAAAAGACTCAT  56 159
LPH40_RS03455 NONE
LPH40_RS03460 NONE
LPH40_RS03465  852105 ..  852120 +  -2.5  -3.41073   ACATGTAAAGTGATG              CGGCA ACCCAG TGTCG               TCTTTCGCTGCAGTG  45 378
LPH40_RS03475  854135 ..  854151 +  -6.5  -3.15249   AATGCCGTACCTCAT              GCGTGGT GTC ACCGTGC              TTGATACAGGGTGTG  57 420
        ettA  866079 ..  866100 +  -7.2  -5.02074   CAGCCGCGGCCCGCC           CAGTGCGG GCCAGG CCGCACAG            TTTTTTCAGCACTGA  88 44
         mqo  868614 ..  868632 +  -4.4  -2.79183   CTTCAACATGCGCTA             CGATGCGG CAT CGGCTTCG             TATGCTAACGATAGA  45 118
LPH40_RS03560  872425 ..  872437 +  -6.3  -3.54307   GGATGCAAGCTCGGT                GCAAT GAA ATTGC                TTTACGGCCAGTGTT  61 75
        miaB  886874 ..  886891 +  -3.3  -4.56597   ACACAGCAACACATC             GCAGTGG TTAC TCACAGC              TTTTTCAAAAAGCAA  66 98
LPH40_RS03620 NONE
        ybeY NONE
LPH40_RS03630 NONE
LPH40_RS03635 NONE
LPH40_RS03640 NONE
LPH40_RS03645  892658 ..  892674 +  -2.2  -2.87132   AAACGAAGGAACATG              AGTGGA AAAAC TCCACC              TGTGTGGCCACCACA  40 274
LPH40_RS03650  893535 ..  893564 +  -2.8   -3.6715   GCAGCGCCCCCATAA       GTGCTCCCATCG TACCGT TGATGCCAGCAC        TTTCGACTTCCCTCC  51 178
        asnS  928893 ..  928905 +  -4.7  -3.08046   CCTATCCACGTGCGC                CCGGC AGC GCCGA                ATTTTGAAATAGGCC  49 6
LPH40_RS03755  931041 ..  931051 +  -2.4  -3.12327   ACGACCGTTACAAGC                 GCCG CAT CGCC                 TATTGGCTCTAACAA  43 3
LPH40_RS03760  931794 ..  931804 +  -5.4  -3.65827   GCGCGCAAGAGGTGT                 GTAC TGC GTAC                 TTTGGGTGAGAATTC  59 6
LPH40_RS03770 NONE
        murB NONE
LPH40_RS03780 NONE
LPH40_RS03795 NONE
LPH40_RS03800  939927 ..  939950 +  -5.2  -2.72379   AGTGGTACGCAGCGC          CTGATGGTCC CCTC GCACCAGCAG           TGCTTCACACCTTAC  48 249
LPH40_RS03820  943150 ..  943165 +  -5.4  -4.15222   ATGTTTTTTAAGAAC              CCCGTCT ACA AG-CGGG              TTTCTTGCCACCCAT  66 40
LPH40_RS03825  945358 ..  945384 +  -6.7  -4.39002   AACAACTGTGCTCTC        TATCAC-CTGAC AAGA GTCAGGGTGATG         TTTTGTGAGCAGTTT  74 65
LPH40_RS03835  947081 ..  947096 +  -4.7  -3.14284   AGATCCTGGCGCACA              TCCAC ACCAAC GTGGA               CTTTATTCCTAAAGG  50 298
LPH40_RS03840 NONE
LPH40_RS03845 NONE
        grxC NONE
LPH40_RS03885  961977 ..  961990 +  -9.5  -3.27676   ATACGGATGGGATAG               GCGCG TAAC CGCGC                TCTATTTGAGTCAGT  73 224
LPH40_RS03895 NONE
LPH40_RS03900  965577 ..  965591 +  -2.1  -2.60075   CACATACAGTAAACG               CGATG CACAA CATTG               ATTCATTCGCAAGCC  39 10
LPH40_RS03905  966454 ..  966472 +  -5.4  -4.43477   AAGCAGAAAAATGCC             TAAGATTT TCG AAATCTTG             TTTTACTTGAATCAA  69 244
LPH40_RS03920 NONE
LPH40_RS03925  970145 ..  970160 +    -4  -4.65916   TCATTCAGTCTGGCC              TT-CGCC GAC GGCGCAA              TTTTATTCACATGAC  68 238
LPH40_RS03930  970732 ..  970746 +  -6.4  -2.62792   GGGCGAACCCCGGGA               CGCTAA GCT TTGGCG               CTATTTCGCATCGCT  53 368
LPH40_RS03940  975777 ..  975826 +  -6.6  -2.70932   AAAACAAGTCGAAGC CCTAAACCTGCACTCTTTGCCATC TTAC GATGGCAAAG-G-GCAGACTTAGA TCATTGCCAGCAACA  53 101
LPH40_RS03955  980368 ..  980380 +  -3.3  -2.52464   GAACCCCAGTATATT                GGGCA CTC TGCCG                TACGTTGAACACCCC  42 235
LPH40_RS03965 NONE
LPH40_RS03970 NONE
LPH40_RS03990  991319 ..  991331 +  -2.7  -2.68338   GGCCATTTATCCTTT                TTATG AAC CATAG                TGGATTTCAGTTACT  41 109
        hemA NONE
        prfA NONE
LPH40_RS11965 1025078 .. 1025088 +  -2.4  -3.45945   GTCCTCCATCTACAT                 CGGG AGA CACG                 TTCCTTCTCCATCGC  47 438
LPH40_RS04145 1030058 .. 1030077 +  -3.4  -2.85008   ATGAATCAGCGATCC            GCAGCAGG CAAC CCAGCTGG             ATGTTTGTTATGCCG  43 155
LPH40_RS04155 NONE
LPH40_RS04160 NONE
LPH40_RS04170 1032792 .. 1032813 +  -2.9   -2.7314   GCCGTTTCGATGGCC           CGTGCAAGT GGGC ACATGCAAG            TCATCTCGTTTGGGA  41 65
LPH40_RS04175 1033153 .. 1033169 + -10.1  -3.72695   CTTGCGTGGATATAT              CGCGGGA CAC TCCCGTG              TTTGGTCAACACGAT  79 119
LPH40_RS04180 1035347 .. 1035357 +  -2.4  -2.83164   GTTCCGGCTTACAAC                 CCCC TAT GGGA                 TGTAATGATGACTGA  40 169
LPH40_RS04185 1036086 .. 1036098 +  -4.8  -2.85379   TGTGGTTCCAGCTTA                CTGG CCCAA CCAG                CTTGTTGAATTCTCT  47 525
LPH40_RS04195 NONE
LPH40_RS04200 NONE
LPH40_RS04205 NONE
LPH40_RS04210 1039715 .. 1039729 +  -7.8  -3.66666   GACCACTCTTTTAGC               CGCCTG CTG CAGGTG               TTTGAGGCTTTTGGC  68 448
LPH40_RS04245 1045376 .. 1045391 +    -6  -3.20858   TCCAGTATCCACTGT              CACCGC TATC GCGGCG               TTCGTGCATATGATC  55 280
LPH40_RS04250 1047090 .. 1047101 +  -4.4  -2.73619   AATCCAAGTGCTGTA                GACA TCAA TGTC                 GTTTAACACGTGCTT  44 166
LPH40_RS04255 1048092 .. 1048112 +  -2.6  -3.76839   TACATCTATGAAGGC            CACCAA GCCTACCCA TTGGTG            TTTGAATTGAACTTC  51 55
LPH40_RS04275 1059735 .. 1059765 +  -4.6  -2.76418   TAGATATTACGCTCC       GCCAATATCGGTGG TGT CCACTGATACAGCC       ATGTTTCTGTCAACG  47 257
LPH40_RS04305 1070564 .. 1070580 + -10.9  -3.07501   TTCGATGCCCGCATC              TCTGCTC AGA GAGCAGA              TATTCAACATTCTAT  74 465
        trxA 1077677 .. 1077688 +  -2.2  -3.23715   CTTATTCGGCCCCAA                CGCGC GCT GC-CG                TATTCTCAAAATTCT  43 133
         rho NONE
       cas5c NONE
       cas8c NONE
       cas7c 1088204 .. 1088217 +  -2.4  -2.92094   CCGTTGACTCCATCG               GATC GGAGCA GATC                GTATTTTCTGTCAGA  40 281
LPH40_RS04380 NONE
LPH40_RS04385 1098524 .. 1098537 +  -3.7  -3.72576   CACCAAACCAAATAG               CGAGG TACA CCGCG                TTTCGTCAACCCAAC  53 247
LPH40_RS04390 1099825 .. 1099845 +  -5.4  -3.49102   TGGCTGAGCACCGCG            CGTCTTCT TGGAC AGGGGACG            TTGTCTGCCCGATCT  56 395
LPH40_RS04400 1100077 .. 1100090 +  -6.7  -3.30474   CACAACGATTGACCT               GTGCT GCCG AGCAC                TTCGTGGTTCTCCCA  59 68
        proC 1108738 .. 1108762 +    -3  -3.65883   GCTACCACGTGCATG         TCATGCA-CGTT CGC AACGATGC-TGA         ATTTTTTAACTGCTC  51 317
LPH40_RS04425 1112190 .. 1112215 + -16.2  -3.57144   CTGATGCTGTCACCG         GCGCGCCACT GCTTAA AGTGGCGCGC          TTTCCGGGTGCAAGC 100 37
LPH40_RS04430 1114462 .. 1114482 +  -3.9  -2.78935   GCGATCCAACAGCAG            CACCATGTT CTC AACAGGGCG            TGTGCTCAAAAGTCT  45 368
        ssrA 1115395 .. 1115416 + -12.3   -5.7946   CCACCAATCACTAAA           CCCCAATCG TTCT CGGTTGGGG            TTTTTTTCTTGCCAG 100 35
LPH40_RS04515 1135542 .. 1135559 +  -2.7  -5.49729   CCACTATTCAAAAAA             CCAA-CGG TTC CTGGTTGG             TTTTTTTGGCTCGTT  84 148
LPH40_RS04615 NONE
LPH40_RS04620 1150283 .. 1150326 +  -6.6  -4.14243   CACCAGCAGGACACC TGCATCGCGCAACGGGGTCAG TGC CTGTCCCAGT-GCGAGGTGTG TTTTGGGATCCAGTC  68 364
LPH40_RS04645 1152304 .. 1152326 + -10.4  -3.06696   GTGGCGGGTGTCAAC           GCGCCCCGCC GCA GGCGATGCGC           TGTCTTGGAGCCGCG  72 111
LPH40_RS04675 1160049 .. 1160061 +  -3.3  -3.04398   TGGCTGTGGTGCATC                GTGGC AAG GACAC                ATTTTGCAGAAAGGG  45 74
LPH40_RS04680 NONE
LPH40_RS04685 1161431 .. 1161448 +  -4.9  -3.38699   CATGAAAAGAGTCTG             GACATTA TTCG TAGTGTC              TGTGTTGTTTCTGGC  52 179
LPH40_RS04695 NONE
LPH40_RS04700 1163429 .. 1163439 +  -4.6   -2.8005   CAGTTCCCTGATGAA                 GGCG AGG TGCC                 ATTTCGGGTGTATTT  47 151
LPH40_RS04705 1164141 .. 1164152 +  -5.8  -2.60901   AGGCTTAATAATGCT                GGTG ATGG CACC                 CTTGATTAGCACTAT  51 89
LPH40_RS04710 NONE
LPH40_RS04715 1169216 .. 1169261 +  -8.3  -2.63348   GCATCCTGGATTTAG TCGC-TGCACCCCGCTCAGAAA CGC TTTCTGGATGGGGTGCGGGAGG GTTCATATTGATGCA  61 41
LPH40_RS04730 1170430 .. 1170441 +  -7.2  -2.54193   CGATGATTGCTCCAA                GCGG CACG CCGC                 TCAGTTGCAGTCATC  56 41
LPH40_RS04740 NONE
LPH40_RS04745 NONE
LPH40_RS04750 1172641 .. 1172651 +  -3.2  -3.27786   AAAGTATACTATCAT                 GGTG TAG CATC                 TTGATCGATTTTCGG  48 103
LPH40_RS04755 1172900 .. 1172920 + -11.1  -3.79687   CGTCGACTTCTGCTT            GCGGCCGAT AGC ATCGGCCCC            TATTTTGTGGCGCAT  80 185
LPH40_RS04785 1175843 .. 1175854 +  -2.2  -4.41616   CACAAATACGATGGG                CGTC CGAG GATG                 TTTCTTTGGGGACAT  61 136
        mrcB NONE
LPH40_RS04810 1184098 .. 1184117 +  -6.4  -2.55999   CAAACGTTACTGAAC            CGTACCAA CAGA TAGGTACG             CTTGGTCTACCATGG  52 28
LPH40_RS04815 1186417 .. 1186429 +  -7.7  -3.05384   CAATATCGAGAGCCT                CACCA CTA TGGTG                TTCGCTGAAGCCAGG  60 224
LPH40_RS04840 1191308 .. 1191325 +  -2.7  -2.90392   CGTGCGAGGCCAATC             GCTGACGT TGA ATGTC-GC             TCTGGTTGACCCCTC  42 21
LPH40_RS04845 NONE
LPH40_RS04850 1194270 .. 1194291 +  -2.9  -2.73007   GTATCGCTTACATGC           GCTCTGCTAC AGT GGAGCGG-GC           ATTTCCAAACATCTT  41 65
LPH40_RS04855 1195159 .. 1195175 + -15.1  -4.66987   TTGCACACAACAAAA              CGGGCCC TAA GGGCCCG              TTTTATTACGCTGTC 100 71
LPH40_RS04865 1196918 .. 1196939 +    -3  -3.95873   CCACTCAACACCGGA           TGCGCT CACGGAGAAC AGCGCA            ATTTTTTTATAGAAA  54 61
        aceF 1198911 .. 1198925 +  -8.6  -3.22491   AAAAGGAATGCCCCC               CACATG GCA CATGTG               TTGATGCTCAAATTT  64 210
        lpdA 1201151 .. 1201201 +  -5.4  -2.87211   CAGCCTATCGACATT CAAACAAC-ACCTTCTGGTTCGG CCATCA CCGAGCCAGATGGTCGATGTCCG TCTGTACAGCGGGGT  49 69
LPH40_RS04880 1202925 .. 1202937 +  -6.3  -3.63627   CACGTCGTCCCAGGC                GTTTC TCT GAAAC                TTTCCAGTATCAAGC  63 88
LPH40_RS04900 1209110 .. 1209120 +  -3.2  -4.47786   ACATCGGTATATCGC                 CGTT CCA AGCG                 TTTCTTTCGCTGCTT  63 210
        surE NONE
LPH40_RS04910 1212794 .. 1212809 +  -2.6  -4.57569   CCTGCTGTCAGGGAT              GTCGGAT TAA ATCC-AC              TTTTTAAGGACATCG  65 16
LPH40_RS04915 NONE
LPH40_RS04920 1214409 .. 1214419 +  -5.4  -3.13403   TGCTCTGACTCCACA                 TCGT GCA ACGA                 TATTGCTCCAGCACG  52 210
LPH40_RS04925 1215064 .. 1215082 +  -4.6  -5.55769   GCATTTTCCGAGGTT             GAAAGG GTGGATG CCTTTC             TTTTTTCTTGTGCAC  93 205
        msrB 1221860 .. 1221872 +  -4.8  -4.67353   GCCCTCGTCCGATCT                CGGT CAGCC ACCG                TTTTTAAGTAAGTAA  73 461
LPH40_RS04955 NONE
LPH40_RS04960 NONE
LPH40_RS04965 NONE
LPH40_RS04970 NONE
LPH40_RS04975 NONE
LPH40_RS04980 NONE
LPH40_RS04985 1235480 .. 1235493 +  -2.3  -3.09327   TTCACGGCAGATATC               CATCC GGCG GGCTG                TGTTGGATCCAATCG  42 152
LPH40_RS04990 1237478 .. 1237501 +  -2.3  -4.15565   CGCTGACAGCAGCAT          GAGTCAGCG CTCTGA CGATGCCTC           TTTTAACATCCTGCC  57 84
LPH40_RS05010 NONE
        ubiH NONE
LPH40_RS05020 1246429 .. 1246450 +  -6.5  -3.07344   CTGATATCGCGATTG           GGTGGCTCT CCAA ATAGCCGCC            TGTATTCCCGACTAA  54 246
LPH40_RS05030 NONE
LPH40_RS05035 1248256 .. 1248266 +  -3.2  -3.45031   CCATCAAAGACCCAC                 GTTG GTG CAGC                 TTCGATTTTTGACAA  50 3
        cysG NONE
        cysK 1252396 .. 1252408 +  -9.1  -2.69964   GTACATATCGGCAGT                GCCAG CGC CTGGC                TGCTGTACTTGCCGA  59 353
LPH40_RS05090 1260481 .. 1260496 +  -4.6  -3.55622   CCCCTTGATGCACGC              CTTCCC ACTG GGGACG               TTTGCCACCGTTGCA  55 196
        gltX NONE
LPH40_RS05100 1262515 .. 1262526 +  -3.6  -3.17527   GCGACCCAGCCGCCT                CCGC TTAA GTGG                 TGTTGCTGCTGACTG  46 18
LPH40_RS05105 NONE
LPH40_RS05115 1266773 .. 1266794 +  -6.5  -2.73875   ACCGATAACACACTC           CTG-GCTCGC AAC GCGAGCACCG           TCGTGTTCGAACGAC  51 185
LPH40_RS05125 1270172 .. 1270190 +    -6  -3.18199   CCAGATACTCCCCCC             TACACATG CAA CATGGGTA             TTGAATTAAACATTA  55 211
LPH40_RS05135 1273181 .. 1273222 +  -8.1  -4.26903   GAATATCTAGTTAGT GAGTAGGCATTACTGCAAT CGAT ATTGCAGTAATGCGGGGTC  TTTTGCTGCGCTCAC  75 104
LPH40_RS05155 1280930 .. 1280945 +  -3.2  -3.51858   CGACCCGTGGCATCG              TAACCG GTAT CGGCTA               TTGATTCGTTATTTA  50 92
LPH40_RS05255 1305920 .. 1305936 +  -4.4  -3.05384   GCACCAGCAAGGCAA             CGAC-CG GGCT CGCGTCG              TTGCCTCCACAGCAA  47 69
LPH40_RS05260 1306407 .. 1306431 +  -4.1  -2.87132   CACGCAATGCGACCA          GCATGCCCTGT CGC ACGGGGCGGCC          TATCTCGCGCCCCAG  43 378
LPH40_RS05305 NONE
         dcd NONE
        xseA 1323465 .. 1323476 +  -7.2  -3.06796   CGCTGCACTGTTACA                GCCG ACGA CGGC                 TTGCATCAACTACGA  59 65
         rnd 1328033 .. 1328046 +  -6.7  -3.68351   GCATCAGCGACTGTT               CCCTA TCTC TAGGG                TTTGGCTGATAACCA  63 203
LPH40_RS05360 1328658 .. 1328677 + -10.8  -2.67055   TGCCAGTAATATCCA            CGTCTTAG ATGG CTAAGACG             TGCTATCACTCTTAT  72 181
LPH40_RS05420 1341454 .. 1341472 +  -7.4  -3.44146   GGCTGCAACTTCATC             CCACTTCG CCA TGAGGTGG             TTGATTGTAAGCCAA  62 310
        rimK 1344414 .. 1344429 +  -6.2  -2.63182   ACAGTACTTGCGCAA              TTGATG ATGA CATCAA               AGTTTATTTCTTGGG  51 99
LPH40_RS05430 NONE
LPH40_RS05435 1347159 .. 1347171 +  -5.5  -3.22388   CGGTAATTTGTGCAT                CTCCA ATC TGGGG                TTCATGCGTTCAGTA  52 183
LPH40_RS05455 1351165 .. 1351180 +  -3.3  -2.52623   GATAAGTATTATTTT              TGTGA CTTTTT TCACA               CTCTTATCCAAAAAG  42 275
LPH40_RS05465 1354319 .. 1354333 +   -10  -3.85817   GTACTGGACAACACG               TCCAGC AAC GCTGGA               TTTCTCACCAACGCT  79 187
LPH40_RS05470 1354901 .. 1354925 + -17.2  -3.18582   GATCGATGTCGATGA          GAAGCCCGCC TTGAT GGCGGGCTTC          TTGGTGAATACGGTA 100 89
LPH40_RS05475 NONE
        pilB 1357576 .. 1357590 +  -4.2  -3.44851   CGCACGGAAGGTGAT               GCCG AGTTGAG CGGC               TGTCTTTGTCTTATT  52 168
        sucC NONE
        sucD 1363054 .. 1363064 +    -4  -4.57073   CACTCTGGAAAATTG                 CTTT CTC AAAG                 TTTTTCAAAAACATC  68 43
        dnaA 1371302 .. 1371313 +    -3    -3.767   GATGACTGGGACAAA                CTTA TACG TAAG                 TTTAGTGAATAAATG  51 2
        dnaN 1373065 .. 1373077 +  -4.1  -5.61689   GTTAAATCAGATTCT                CATGG AAT TCATG                TTTTTTATTGATTTT  91 384
        recF 1374917 .. 1374928 +    -3  -4.29304   TATTTTTCTTGAATT                GAAT CAAT ATTC                 TTTGTGTTGTACTCC  59 457
        gyrB 1377513 .. 1377524 +  -2.2  -3.48276   GTTATTACGCACGGA                TAGC TGTT GCTG                 TTCTATCAGAAAACG  47 42
LPH40_RS05550 1378365 .. 1378378 +  -3.9  -3.16742   GATTGTATTTTTGGG               GAATT CAAT AATTC                TTACTCAAAATTAAA  48 15
LPH40_RS05555 NONE
LPH40_RS05560 1381016 .. 1381032 +  -5.8  -3.40867   AGCTTAGAAACTGCT              GCGGTG TCAAT CACTGC              TTGATTCATGGATCG  57 512
LPH40_RS05565 1381761 .. 1381786 +  -7.6    -3.646   ACTATAGGCCTAATG         CTGTGGACTGG ACTGC CCAGTCC-CGG         TTATCTGTGCTTCCC  68 34
        exbB NONE
LPH40_RS05575 NONE
LPH40_RS05580 1383546 .. 1383562 +  -9.4  -5.92337   ATATCACCACAAAAA              CGCCAC TTGAT GTGGCG              TTTTTTTTAATATCT 100 79
LPH40_RS05585 1384281 .. 1384296 +  -7.6  -3.42078   CAGATTGGCATCGAA              TTCTCG CATG CGAGAA               TTGTAGTCCCCTGTG  64 185
LPH40_RS05590 NONE
LPH40_RS05595 1387615 .. 1387636 +  -2.9  -4.56436   TTGTAGGTTGCCTGC           ACTGTGCGCG TGG CGCG-ACGGC           TTCTTTTCTTTCATC  65 205
        hemF 1388839 .. 1388858 +  -2.8  -3.98745   CACAGCGTGCGGATG            GCACG-TGG AAT CAAGCGTGC            TTGTTTCGCTGCTTA  56 289
LPH40_RS05605 1389984 .. 1389994 +  -2.4  -3.33492   TGCAAACCACTCCCA                 GGGG CAG CCCG                 TTGTCGCGTGCCTGC  45 66
LPH40_RS05610 1390422 .. 1390432 +  -8.2  -3.60151   CGTTGCGTTGTGAAG                 CCGC TAT GCGG                 TTCTGCTTTGACGAC  69 120
LPH40_RS05630 NONE
        pilV NONE
LPH40_RS05640 NONE
LPH40_RS05645 NONE
LPH40_RS05650 NONE
LPH40_RS05655 1403020 .. 1403033 +  -6.7  -3.65522   CTCGCTCTCCTGCAA               GCTAG TTGT CTAGC                TTGTTACCGTCAATC  63 239
LPH40_RS05665 1406999 .. 1407024 + -13.3  -3.27498   AGATACGCAATGGAA         CACCAGGTACC TGAA GGCACCTGGTG          TTCATATGCCCTATG  91 440
LPH40_RS05680 1409254 .. 1409271 +  -4.9   -3.2812   TATTGCTATCAGGCA             GTCAA-GC CTG GCATTGAC             CTTTTGTGGTGCATC  52 252
LPH40_RS05685 1409757 .. 1409773 +  -2.1  -3.53444   ATTTTTTCGTTCTCT              GAGACAC GCT GTGACCC              TTTAAGGAGGAGTGA  47 67
LPH40_RS05690 1411229 .. 1411240 +  -5.8  -3.06679   CTTGCGGGACATTGT                CGGA TATA TCCG                 TTGCATGGAGGTATT  53 207
        rlmJ 1412729 .. 1412744 +  -4.7  -3.81951   TGATGTTTTGTTTTA              GCGAA GATGCA TTCGC               TTTGGTCATGTCAAG  59 214
LPH40_RS05700 NONE
         mfd 1417626 .. 1417641 +  -2.6  -4.32903   GCCATCCCATGGTCG              CAA-CGT TCT ACGATTG              TTTTCGCTGTTTGCT  62 179
        aroQ NONE
        accB NONE
        accC 1421096 .. 1421116 +  -3.9  -3.42775   CTGGTGGAGGCGCGG            GTGGCCATC CCA GATGACGAC            GTTTTCTTGGTGGCT  50 417
        hmpA 1425888 .. 1425911 +  -9.7  -3.11727   GCCTATTGGGAGTAC          TCATGATCG TTTAGC CGATCATGA           TGTGTTGGACTTGTT  70 429
LPH40_RS05740 NONE
LPH40_RS05745 1428979 .. 1428989 +  -6.8  -3.78775   CCTTACCTTGTCGTG                 CCGA CGC TCGG                 TTTCATGATGAGGGA  63 150
        bioB 1435410 .. 1435428 +  -5.2  -3.38812   ATGCGGAGAAAATCA             CACCGTAT ACA ACGCGGTG             TCTTATTCACGACAC  54 54
LPH40_RS05775 1437005 .. 1437023 +  -3.1  -3.99407   TGCAGGAGGACACGC             GCCTC CGATATGGA GAGGC             TTCTTTCCAGTTTAT  56 225
LPH40_RS05785 1439060 .. 1439075 +  -6.1  -2.80016   AGCCCTGAAGTGCCA              GCCTG CGCATA CAGGC               TACTTGCTGATGCAG  52 179
LPH40_RS05790 1440452 .. 1440482 +  -4.1  -3.66424   GTCCATTTTTCGGTA      TTTCGGCCAAGCGA ATGA TCG-TTGATCGAAA       TTTGGGGTCGTTTTG  55 507
        dacB 1443035 .. 1443045 +  -3.2  -4.40199   TGTGCCCTGTACTTA                 GGTA GGT TGCC                 TTTCTTCGTCTTTTT  63 316
LPH40_RS05800 1445245 .. 1445257 +    -2  -4.18908   CTACTTTCCAATTAT                TACA ATGCA TGTA                TTATTTTAAAAATAT  57 443
LPH40_RS05805 1448827 .. 1448847 +  -3.9  -3.09933   GCAGCATATCATCGT            CCTGTTAGG CGT CCTCACAAG            TTACCTGCATTCAGA  48 49
LPH40_RS05810 NONE
LPH40_RS05815 1449204 .. 1449217 +  -4.5   -3.2375   CATTGAAGCCAGGTG               TGGGC GTGA GTCCA                TTAGATTATGAAGTG  50 168
LPH40_RS05820 1452243 .. 1452253 +  -2.4   -3.4582   CTCCCTATGCGAGAA                 GGTG TAT CTCC                 TCTTTAATGAGGTGA  47 110
         rrf 1452414 .. 1452445 + -15.3  -5.75599   AGGGTCTTTTCCCAT      CGAACCCTCAGCT TGAATT AGCTGAGGGTTTG       TTTTTTTATGCTTTC 100 37
        mutM 1453814 .. 1453839 +  -5.3  -3.14132   GCACGCCGCCAGCGG         TGAACGTTGCG GCGC CGCAACGCACG          TTCCTGAAACCACAA  50 471
         ffh 1456051 .. 1456061 +  -3.2  -3.36991   CTATTTGCGACTGGG                 CCGA TGC TTGG                 TGTTTGCCCATGCTA  48 322
LPH40_RS05845 1457902 .. 1457915 +  -6.7  -3.23899   CATTTTGCGATTGAG               TCCAC CTTT GTGGA                TTGACTTACTTAGCG  57 316
        yhbY 1477663 .. 1477684 +  -2.3  -3.44848   TTGCCAAGCCCTTAA           GCACACGG AGGTCAG CC-TGTGC           TCTTTACTCAGGAAC  47 26
LPH40_RS05920 1478329 .. 1478350 +  -5.9  -2.78154   ACTCAGATCAGTGAC           CATGCGT GCAAAACA ACGCATG            TCATTGCCTGTATAG  52 284
LPH40_RS05925 1478834 .. 1478859 +  -6.1  -3.34043   AATGTGGCGAGTCTG         TTCGGTTCATC GTTG GGTGTGCCGAA          TTGTCAACTAATAAG  57 50
LPH40_RS05935 1481584 .. 1481605 +  -8.8  -3.41125   CAACACGTCGTGATG           CAATCGCA ACATGC TGCGATTG            TTGTCGATGTGTGGC  66 58
LPH40_RS05945 1482302 .. 1482318 +  -2.2  -3.68324   GTGGTGCGATCTACA              CGCTGA TTGAC TGAGCG              TCTTTCTTGCCGATG  50 12
LPH40_RS05950 NONE
LPH40_RS05955 1484771 .. 1484783 +  -2.6   -3.5399   CCGGCAGACGGATAA                CGGT AAGTA GCCG                TTGTGTCGATCTGAT  49 26
        waaA 1487397 .. 1487410 +  -4.5  -3.52341   TATTTTTACGTCAAA               CCTTG ACTC CAGGG                TTGTGATGTTGGAAT  55 144
LPH40_RS05970 1490090 .. 1490112 +  -2.7  -3.85817   TTGTTGTGAGGCGAA           TACTCGG CTATCGCTT CCGAGTG           TTTCTCGCAGCAGGT  54 72
LPH40_RS05975 1492041 .. 1492055 +    -5   -2.9462   CAAACAGTATTCATA               TGATCA TTT TGGTCA               TGATTTCGATCACTC  49 453
        rpsP NONE
        rimM NONE
        trmD 1494738 .. 1494760 +  -2.8   -3.1637   CCCACACCCGAACCC          GTCGTACGT AATGAC ACGTAC-AC           TTAATAAACGTATCT  45 153
        rplS 1495580 .. 1495593 +  -3.7  -3.54951   AATCGCATTGCCTTA               CAGCG CCAG CGCCG                TTCTATGATGCGATG  50 409
         map 1496597 .. 1496623 +    -3  -3.83262   GTGACGCCAACCTGG        C-GCGCGTCGA GTTGGA TCGATGTGCAG         TTATTGTGCCGTTTC  54 80
        dapD NONE
LPH40_RS06015 1500574 .. 1500592 +  -3.8  -3.13566   CCCAACTTCTCATTC             TCATGAGC GAT GTTCTTGA             TCTTGCCTGTGATCT  48 174
        dapE 1501998 .. 1502015 +  -7.7  -5.29445   CATTGATCAACACAT             CCGCATC GCCT GATGTGG              TTTTTGTTATTCAGG  93 314
        asnB 1504265 .. 1504275 +  -6.8  -3.35798   CGGCGGCAACGTTGT                 CGTG GAT CACG                 TTGTCGATCAGGCGT  56 488
LPH40_RS06035 1507635 .. 1507645 +  -3.2  -3.55761   ATGTTGCCGACGTTC                 TCCA TCA TGGG                 TTTCAAGCATCGCTA  50 256
        lexA 1509982 .. 1509993 +  -5.8  -2.81045   CTTTTTCTGACGTTG                TCGC TCTG GCGA                 TGCTGTTGTACGTGA  52 68
        recA 1511177 .. 1511196 +  -2.8  -3.62572   CATTATCGCGGATGA            CAGCAGGA TTAG TGTTGCTG             TTTCCCGTGGTGATG  51 45
        alaS 1514602 .. 1514619 +  -7.7  -3.22476   CCAGGTAATGTAGGT             CGGTTCA GTTG TGGACCG              TTCATCCTGGCTGAT  62 103
        csrA 1514933 .. 1514947 +  -4.9  -3.14344   CCTTCACAAGCCTAT               CCGCC AAAGA GGTGG               TTGGTACCCGGAGTG  50 79
LPH40_RS06065 1515510 .. 1515520 +  -6.8  -5.09221   TGCAGATGTTGACTA                 CCCT CAT AGGG                 TTTATTTTTGTTATC  87 486
LPH40_RS06080 1520028 .. 1520050 +    -4  -3.10895   GATTGCCTGAGAGCC           TTAGGGACGT TGC GCGTCCCACA           TATCTATCTCTTCCG  48 31
LPH40_RS06085 1522033 .. 1522050 +  -4.1  -2.54193   CGCCTGCAGGACAGA             CG-CCAGC GGT GTTGGACG             TCGCTTCGAATGCTG  44 110
LPH40_RS06090 1523577 .. 1523591 +  -4.2  -4.42788   TGCCACAGGCGGTGG               TCCTCT GCC GGGGGA               TTTTGTGGCGTTGGA  65 332
        lptF NONE
        lptG 1532133 .. 1532144 +  -4.4  -3.01712   CATTGCCAGCGACTG                CATG GAGC CATG                 TGTTCACGCACCCGA  46 346
        glmS 1535368 .. 1535380 +  -3.3  -3.94276   AGCATCGTCAACCTT                CCATG GGG CAGGG                TTTGTACGCTCTTTT  56 429
        speA 1540069 .. 1540086 +  -3.3  -3.96624   GTGTTGATCGCTTAT             GTGGGGT TGTG ACACCGC              TTTCTACTGCGGGTG  58 150
       coaBC NONE
         dut NONE
LPH40_RS06190 1548783 .. 1548800 +  -3.3  -4.29326   CACCACTTTTTAGTG             CCCGGTA ACGT TGCAGGG              TTTCTTCGATTTCCC  61 85
LPH40_RS06205 1551896 .. 1551911 +  -3.2  -4.08958   TTCGCTTCCCCATGA              GTTACG GATA CGAAAC               TGTTTTCTTTCATCA  58 439
LPH40_RS06215 NONE
LPH40_RS06220 1555460 .. 1555476 +  -2.1  -2.93447   CGCATTCAAGAAGCA              CCAGACC GGT GATCAGG              ATTTCTCGACGTTGC  42 310
LPH40_RS06225 NONE
LPH40_RS06230 1557179 .. 1557189 +  -3.2  -3.79787   GGTGAAAATAAAGCC                 GCTG CAA TAGC                 TTTGAATTGATCTCA  55 268
LPH40_RS06235 NONE
LPH40_RS06240 1558544 .. 1558560 +  -3.7   -3.1944   AGTTGGAGTAGTGCT              TCGGA TGCTTAT TCCGA              TTCAATGCTTTTCAT  46 518
LPH40_RS06250 NONE
LPH40_RS06255 1562339 .. 1562369 +  -4.7  -3.65738   GTTCGAGCAGCGTTG      CCTGCA-CATCGGC TGGC GATGGTGGTGCAGG       TTGTAGTTGTTTGGT  54 483
        tyrS 1566173 .. 1566190 +  -6.3  -3.72592   TATATCGCAGGTTGG             CACATCG TATA TGATGTG              TTATTCGTGCAGGTT  63 134
LPH40_RS06275 1568412 .. 1568432 +  -3.9  -3.09933   GCAGCATATCATCGT            CCTGTTAGG CGT CCTCACAAG            TTACCTGCATTCAGA  48 49
LPH40_RS06280 NONE
LPH40_RS06285 1568789 .. 1568802 +  -4.5   -3.2375   CATTGAAGCCAGGTG               TGGGC GTGA GTCCA                TTAGATTATGAAGTG  50 168
LPH40_RS06290 1571731 .. 1571741 +  -2.4   -3.4582   CTCCCTATGCGAGAA                 GGTG TAT CTCC                 TCTTTAATGAGGTGA  47 110
         rrf 1571902 .. 1571933 + -15.3  -5.75599   AGGGTCTTTTCCCAT      CGAACCCTCAGCT TGAATT AGCTGAGGGTTTG       TTTTTTTATGCTTTC 100 37
        mutM 1573302 .. 1573327 +  -5.3  -3.14132   GCACGCCGCCAGCGG         TGAACGTTGCG GCGC CGCAACGCACG          TTCCTGAAACCACAA  50 471
LPH40_RS06320 1578364 .. 1578412 +  -6.3  -3.44156   ATGCGGAATGTTTTA TGTGATCATGGCTATCAATAAT CGACTC ATTA-TGATGGTCGGGATCACA TCTTGTCTTGAATTT  59 439
LPH40_RS06330 1584119 .. 1584133 +  -2.8  -3.27498   GCCAACATAAGCAAA               TGTGAA CTA TTCGCG               TTACTGTAGCCTATC  47 73
LPH40_RS06335 1584780 .. 1584823 +  -5.2  -3.97042   ACTTTATTGCAGTAG CTGCGCAGGTCCTATGAGATC GGA GGGCTTG-AGGGCCTGCGGGG TTTAATTCCTCCTGC  64 9
LPH40_RS06350 1589667 .. 1589687 +  -3.2  -5.68039   CCGTCACAACGCCTG            CAACGGGA TTGCT TCTCGTCG            TTTTTTTATCCCTTT  89 95
        bioA NONE
LPH40_RS06400 1602213 .. 1602225 +  -3.3  -3.34222   CATTAGCATCTATTC                TGGCC CAT GGCTG                TTATCACGTGCTGAT  48 488
LPH40_RS06405 1602892 .. 1602925 +  -5.4  -4.39828   ATAGCTCCCAAAGTG     GC-TTCAGTACCAGA TTGAC TCTGGTGTTGGACGC     TTTTATCAAGCTGTT  69 8
LPH40_RS06410 1605325 .. 1605345 + -14.1  -3.30575   ACATATCGGTGATCA            GAGCACAGT GTC ACTGTGCTC            TTACTGCGTTTTTGT  93 50
        queD 1606171 .. 1606182 +    -3  -3.96387   GAACGGATAGATTGT                CAAA AATA TTTG                 TTTGGTTACATTCCT  54 468
LPH40_RS06425 1609577 .. 1609595 +  -7.5  -3.53224   CGGATGACTGCTTTG             GGTGAAA CAAGT TTTCACC             TTTGAAGAAAAGATG  64 328
LPH40_RS06440 1613208 .. 1613220 +  -7.7  -2.71263   CCCATAAGCGCGCAG                GCGTT TGT AACGC                TGATTGAGCAGCGTT  53 225
LPH40_RS06460 1620040 .. 1620053 +  -5.9  -3.36273   TATGACCGTATCCAG               CGTCG ATGC CGGCG                TTGATCTTGGCACCG  57 8
         rpe 1620934 .. 1620944 +  -6.8  -3.18383   GACCGAGATGAGGTA                 CCAG AGT CTGG                 TTGATGGATGCAGAT  57 181
        trpE 1625089 .. 1625104 +    -4  -3.14961   GATTTTCCTAACTGC              GTAATG AGTC CATTGC               TATGTTACTCATGCT  48 189
LPH40_RS06480 1625700 .. 1625710 +  -3.2  -3.12283   TTCTGAGGGATACAT                 CAGC TGT GTTG                 CTTTTGCATCAATTC  46 35
        trpD NONE
        trpC NONE
LPH40_RS06495 1628584 .. 1628595 +    -3  -4.09805   TTGCTTCGATCACAT                GTTT GTCA AAAC                 TTTCGTTGTTGATGA  56 234
LPH40_RS06500 1630100 .. 1630110 +  -5.4  -3.62775   GGTTTGATCTAGCGA                 TACC AAG GGTA                 TTATTGCAGCGTGCT  59 201
LPH40_RS06510 1633193 .. 1633218 + -11.2  -3.76837   ATTGTTTTCTTCGGG         TCGCCGGTAT TATTAC GTACCGGCGA          TTCTTGCATTCTCTA  81 79
LPH40_RS06520 NONE
LPH40_RS06525 1637006 .. 1637022 +  -2.2  -4.13591   TCACATCGCCGTCGC              CGGC GATTGACAG GCCG              TTTGTCTGATGTTCA  55 0
LPH40_RS06530 1639025 .. 1639056 +  -3.5  -3.38564   GCCCGGGGGGTGTCA      CAGGCGCGGCCGC AGTGAC GCGTACCCGTCTG       TTCTGCATCGCTTTG  48 8
LPH40_RS12005 1639454 .. 1639485 +  -8.6  -3.45532   GCGATCTGGGTTTCA      GTGCTCGTGGCAGC TTTC GCACCCGTGAGCAC       TATCTTTGTTACTTG  69 309
         tgt NONE
        yajC 1642166 .. 1642190 +  -8.5  -3.17194   GCGGTGCTGCAGCTG          GCGTCGCGCGA GAC TTGCGCAATGC          TTGAATTCCCCCGCT  64 71
        secD NONE
        secF 1645187 .. 1645205 +  -3.8  -4.19238   TGATTTGGCGCTCCC             TAGGGG GCTCGAA CCCCTG             TTTTAGCCTTGAGAG  62 196
        pcnB NONE
        folK 1647107 .. 1647123 +  -2.2  -2.90955   TGGCTTGGTACCAAT              CAGGTA GATAA TACCCG              CTTATTAGTCTTTAA  40 19
        panB NONE
        panC NONE
LPH40_RS06585 NONE
         pgi 1651136 .. 1651153 +  -7.1  -2.91467   ATATCGTAAGTGTGA             TTGATGT AAGC ACATCAA              TGTCCTTCCAGGTTT  57 378
LPH40_RS06595 1652782 .. 1652809 +  -2.6  -5.34365   GTTGGTTTGGTGATT        TCCTCGGTGAGA TTGG TTTCTCTGCGGA         TTTTTCTTCTTGTCG  77 57
        rimP NONE
        nusA NONE
        infB 1659133 .. 1659161 +  -2.3  -2.79248   TCGAACGTATTGAGG        TGGCGCGTACGTT GTA AGCGTACAGGTCG        TGCTTGGCTGTTAAT  40 9
        rbfA 1659649 .. 1659679 +  -4.8   -3.1478   CGAGTGTGATTAAAT      CTTG-CATTGGTG TGCAAC CACCAATGTCCAG       TGTTGATCCACTGCT  50 28
        truB 1660726 .. 1660740 +  -7.8  -2.71364   TTTCATTAGGTACCT               TGCGCT CCA AGCGCG               TCCTTCCAGCAATCG  58 106
        rpsO 1661192 .. 1661204 +  -4.1  -3.08639   GTTATTGGCAAAGAC                TGAGC ACA GTTCA                TCTGTTGAAAGTATT  47 133
         pnp 1663742 .. 1663777 + -22.2  -2.79183   TCCATCCTTAGCACA    TCCATTCATAACCTCG TTTA CGAGGTTATGAATGGA     TGTGCTAAGCATAGA 100 427
LPH40_RS06640 1665246 .. 1665270 +  -3.5  -3.32647   ATTAAGGTACTTCTG          TGTGTGGTTAG ATT CCAGTCACGCA          TTGGTATGGTTGACG  48 36
LPH40_RS12010 1671897 .. 1671908 +    -3  -4.51699   TGTTTAGCAGCGCAC                CAAT GGCG ATTG                 TTTTGTGATGGTTCT  64 284
LPH40_RS06665 1675029 .. 1675043 +  -6.4   -3.3197   TGCTCTAGAAGCCGA               CGCTAT CCA GTAGCG               TTATGACGATCATCT  59 409
        rfbB 1681327 .. 1681342 +  -3.9  -2.91924   TTGAGCGTATAGGGA              CTGCG GTGTAA CGCGG               ATTTCTGGAAAATAA  45 15
        rfbA NONE
        rfbC 1682833 .. 1682847 +  -5.6  -2.84325   CGCTTGCCGGTATAC               GTGCCG TGA CGGTGC               TGGTGTTTGGGGCGG  49 17
        rfbD 1683874 .. 1683910 +   -10  -4.56597   GCAGCGCATCCGGCA   GCAGCCACGTGGGCCGC TGTT GCGGCCC-CGGACCTGC    TTTTTCAAGCACGAC  91 153
LPH40_RS06725 1688957 .. 1688989 +  -2.1  -4.95876   TTTCTCCATAATTGT      GAATCTAATCACA CAATAAT TGTGATTAGAGTA      TTTTTAATTATAGTT  70 289
LPH40_RS06730 1689334 .. 1689372 + -16.1  -3.06133   AAGTAAGCTGTGGTG   TGGTCTAGGCAGCTGGA TGCAT TCCAGCTGCTTAGTCCG   TTCGATGAGACGTTG 100 35
LPH40_RS06735 1691569 .. 1691597 + -13.1  -3.09175   GCGGGACGAGATTAA        GCAGCACTCGAAC CAC GCGCGAGTGCTGC        TATTGGGTACAGCTT  83 370
LPH40_RS06740 1692268 .. 1692282 +  -7.8  -2.91681   AAAGTTGGTTGCCTG               GCCGAC CAC GTTGGC               TGTGTCGCGTTGCCG  59 89
LPH40_RS06760 1697168 .. 1697194 + -15.9  -2.62616   TCTTGGGTATGGAGG         CTGACGCACGG TGATC CCGTGCGTCGG         TGGTGTCCCGGATGG 100 41
LPH40_RS06775 1703855 .. 1703874 +  -5.8  -4.06491   GATGACTATGCTGTT            TTGCTATT AATG AATAGCGA             TTTGTATAACGTTGA  66 168
LPH40_RS06790 1707111 .. 1707136 +  -9.7  -3.14878   CTGGTTTAGGTGGGC         TCCTTCTCACC TGGA GGAGGGAAGGA          TATTGACTTGCCGGG  70 107
         mpl 1709116 .. 1709131 +  -6.8  -3.60296   GTAGTAGATAGCCTG              GGTCCG CTTG CGGATC               TTTGAAATGACAGTA  61 409
LPH40_RS06805 1712170 .. 1712193 +  -6.7  -3.82031   ATAGTCGTAGACTGG          TGCAGCGAT TCCGTC ACCGCTGCA           TTTCCTCGTCCTTGG  66 50
LPH40_RS06810 1712990 .. 1713007 +  -4.1   -3.0094   ATCCGATGAATCTGA             AGATGGT CAAC ACCATCC              TGTCTCTCGCTGAGC  47 104
LPH40_RS06815 1713738 .. 1713767 +  -6.3  -3.34609   CTGCCACGTTGTTCT       CGGCTTGCTTGCA TTGG TGCAAGCTCGCAG        TGTTGGTTTGCATCC  59 297
        rarD 1715807 .. 1715843 +  -6.5  -2.77658   GGATGGTGTGTCAAA    CAGTCGGCATCCTGT TGTATGT GCAGGTGGCTGACTG    TAGTTGGGTATGGTG  54 483
LPH40_RS06875 NONE
LPH40_RS06880 NONE
        acnB 1734554 .. 1734593 + -19.4   -3.0263   ATTGTACGTTGTCAT  CTCAACCAGCCCGGAG CCTGTCAT CTCCGGGCTGGTTGCG   TGTTAGGCAAGTGCT 100 47
LPH40_RS06890 1735267 .. 1735288 +  -6.5   -5.4505   CCACCAATATCAAAA           GGTCAACCG TGTG CTGTTGGCC            TTTTTTCTTGCCCGA  93 35
LPH40_RS06895 NONE
LPH40_RS06900 NONE
LPH40_RS06905 NONE
LPH40_RS06910 NONE
LPH40_RS06915 NONE
LPH40_RS06920 1743580 .. 1743590 +  -3.2  -2.73364   ACCTAGATGCAAGAA                 TCAC TCA GTGG                 TGATTGCGATAAAGA  42 56
LPH40_RS06925 1744647 .. 1744661 +  -7.8  -3.53012   ACTGCTGCTGCTGCT               CACGGC CTG GCTGTG               TTTGACGCGGCGCGG  66 77
LPH40_RS06930 1745328 .. 1745347 +  -8.6   -5.4505   CACCCATACCAAAAG            GTCAACAG TGCG CTGTTGGC             TTTTTTCTTGCCCGA 100 294
LPH40_RS06935 1747292 .. 1747308 +  -2.9  -2.92668   AGGTATTGCTCTGAG              GACGATG GAG TATCGGC              TATCCTTGCCTACTA  43 368
        tpiA NONE
        secG NONE
LPH40_RS06950 1748695 .. 1748706 +  -5.8  -2.87132   GGCGATTTCGTCAGC                GTGG AGTT CCAC                 TGTATCCCCCCCCCC  52 58
LPH40_RS06955 NONE
LPH40_RS06960 NONE
LPH40_RS06965 NONE
LPH40_RS06970 NONE
        nuoE NONE
        nuoF NONE
        nuoG 1755847 .. 1755860 +  -4.5  -2.91912   ATCGGTGCTGGTCGC               GTCAC GATG GTGGC                TGTATGAATGCATGG  47 5
        nuoH NONE
        nuoI 1757440 .. 1757459 +  -2.1  -3.09987   CTGCCGATGCTGCCT            TCCGTTG AGGTCA CGATGGA             TTGGGTGAATATTGC  43 18
LPH40_RS07000 NONE
        nuoK NONE
        nuoL NONE
LPH40_RS07015 NONE
        nuoN 1763592 .. 1763610 +  -3.2  -4.69868   TCGCGCATCTGGCCT             GAAGAT TGGGTGC ATCTTC             TTATTTTTATTCTAT  69 24
LPH40_RS07040 NONE
LPH40_RS07045 NONE
LPH40_RS07050 1770745 .. 1770755 +  -6.8  -3.75933   TGTACGCCGTGCGGT                 GTGC ATT GCAC                 TTTAATCAGGTGTCT  63 57
LPH40_RS07055 1772228 .. 1772243 +    -4  -3.87373   TTCCGAGGTGACTAA              GATGACC CGT GG-CATC              TTTCTCCAGCGTGTG  58 200
LPH40_RS07070 1777483 .. 1777512 +  -7.1  -3.07962   AGGTCTCGTCATTGG       CGTGCAGGTAGAA TCCG TTCTTCCTGCGCC        TATTCAGGTATCCAG  59 140
LPH40_RS07075 1779977 .. 1780006 + -16.5  -2.70826   TATTGGACCGTGAGG       ACAATGCCCCTGG ATGT CCAGGGGCATTGC        TGGTGTATCGGTGTG 100 175
        rsmD NONE
        coaD 1783311 .. 1783323 +  -3.4  -3.12668   CCCTCAGGGAGGAAC                CATG AAGAA CATG                TTGCGTGTGGCAGTG  46 73
LPH40_RS07095 1783952 .. 1783980 +  -3.1  -2.53905   ATGTGGCTAGCTTTA        TTTCAGAGACACC CGT GATGTCGTTGAAG        ATTAATGCATTGTGC  40 171
LPH40_RS07100 1784243 .. 1784255 +  -3.3  -4.05529   ATGAAAAGGAACCTC                CCGCA ATA TGAGG                TTATTTACTCGTTGT  58 15
LPH40_RS07110 1789046 .. 1789098 +  -6.5  -3.35679   CCTTTACTGGTGTTC CGGTC-GG-TGC-GGCGATGTCCA-TC CCT GAGTGGCCATTGCCTGCAGTCTGACCG TTGTAGATGCGGGCA  56 406
        dksA 1792391 .. 1792402 +  -3.6  -3.77808   GTCGCTGCAGTTCTT                CCGG AATG CTGG                 TTCTCTTCTCGTAAC  53 145
LPH40_RS07135 1793868 .. 1793884 +  -3.6  -5.00884   CACTAAGAAATGTTC              CGATCG TGGAC CGACCG              TTTTTTGAGGCGCGT  75 393
LPH40_RS07140 1794188 .. 1794243 +  -8.4  -3.36452   TCGACCATGCACACA TGGGGTTGCACTGATTTCCATGCG TTCACTGC CGCATGGAAATCATCTCAACACTA TTAGTGTTCACAGAT  66 12
LPH40_RS07145 1794761 .. 1794775 +  -4.2  -3.06261   AGCCATGCGTCAAGA               TCGTCA TCA TGGCGG               TCTTGACGCTTACGG  47 54
LPH40_RS07150 1795052 .. 1795065 +  -3.7  -2.55015   TCACGCAGGTCCAAC               CGGCG TAGC CGCGG                TGCCTTCAGTGCGGT  42 77
LPH40_RS07170 1799277 .. 1799293 +  -9.4  -5.48054   ATCCGTTCAAAAAAA              CCCAGC CCGAT GCTGGG              TTTTTTCATTTTGGT 100 273
LPH40_RS07175 NONE
LPH40_RS07180 1802009 .. 1802036 + -16.4  -3.21395   ATATTGCTGAAGTCA        TCCCTCCGCCAGT GCA AC-GGCGGAGGGA        TATTCTGCCGGCCAT 100 383
LPH40_RS07185 NONE
LPH40_RS07190 1805055 .. 1805088 +   -11  -3.84825   TCCCCGATACCGCAT     TGCGGAAACACCGCC AAGCA GGCGGTG-TGCCGCG     TTTGGTCTGCATCGC  80 209
        argC NONE
        argH 1807592 .. 1807604 +  -4.8  -3.36991   GGGGATTCGGACAGC                CGCA CCGCC TGCG                TCTTTCCGGGTACTG  52 74
LPH40_RS07210 NONE
        proB 1809217 .. 1809228 +  -5.8  -3.53012   TGTTTTGCTGCAGGG                GCTG TCTC CAGC                 TTTGCGAAGACAGAC  59 64
LPH40_RS07220 1810870 .. 1810887 + -12.7  -2.55205   CGGTGAGGGCCAAGT             GCGGCAC TGAT GTGCCGC              CTCTTGGTGTGTTGT  81 16
LPH40_RS07225 1811928 .. 1811938 +  -3.2  -4.27316   ATATTCCCGTTGTGG                 TCCG TTT TGGA                 TTTTAAATTAGAGAA  60 9
LPH40_RS07230 1813157 .. 1813175 +  -7.4  -2.86164   CCCAAGTGCTGGTCG             AGTTGCTG CGG CAGCAACG             TATCATCATTCCGAC  57 454
LPH40_RS07240 1816048 .. 1816061 +  -2.3    -4.431   GGCACTGTGGAGTGT               CCGTC AAAC GACCG                TTTTATGAATAGGTC  61 239
LPH40_RS07250 1820101 .. 1820118 +  -6.9  -4.54047   GCACATTGAACAATC             GGGCAGC ATCC GCTGCCG              TTTTCTGTCCAGTGC  76 268
LPH40_RS07275 1822452 .. 1822464 +  -2.7  -4.72272   TTGGCCAATGCCGTT                TATGT CTT ACATG                TTTTTCATAAAGAAG  68 255
LPH40_RS07285 1822847 .. 1822860 +  -9.5  -4.20749   ACCGCATAGAAGAAA               GGCCC GGAA GGGCC                TTTATTGCGCTGTTG  83 40
        trbG 1826534 .. 1826552 +  -4.5  -3.20078   CTGAGTCAATGAGTC             TGTACCG CATCA CGGTTCA             TGTTGGTGTGCAGTC  50 409
        trbJ NONE
LPH40_RS07320 NONE
        trbL NONE
LPH40_RS07330 NONE
LPH40_RS07335 1830867 .. 1830881 +  -4.2  -3.66784   CCGAAATTTCCGTCA               GCCAAT CAA ACTGGC               TTGTCTTGCGCCTGA  54 73
        gcvA 1836626 .. 1836639 +  -3.1  -3.81414   GTAGCGGATCAAGCC               CTG-CC TTC GGTCAG               TTCTTCATTGAGAAT  54 368
LPH40_RS07385 1837917 .. 1837928 +  -5.8  -3.21218   TGGAACGAGGTCGAA                GACG ATTG CGTC                 TTCGTGCTGAGCCGT  55 256
LPH40_RS07395 NONE
LPH40_RS07400 1840625 .. 1840638 +  -5.2  -3.06492   AGGCCGCTTCCGCAC               CGCG AACCCG CGCG                TCTTCGGCTCGGTGC  51 157
LPH40_RS07410 1841412 .. 1841425 +  -4.5  -4.31412   TGATGGGACGATCAT               CGGTT TGGT AGCCG                TTTTCATCAATCTTT  65 298
LPH40_RS07425 1843293 .. 1843331 + -10.4  -3.54129   CACCGCCATGTCAGA   TGTTTGATGTAACACGAT ATC GTCGGGTTTCATCAAGCA   TTTCACAGGCATGTA  77 306
LPH40_RS07435 1844268 .. 1844306 + -15.6  -3.54129   AACAGCTGTGTCAGA   TCTTTGATGAAACACGAT ATG ATGGTGTTTCATCAAGGA   TTTCACAGGCATGTA 100 306
LPH40_RS07445 1844944 .. 1844954 +  -5.4  -3.42366   ATCATCCCATTGTGG                 TCCA GTT TGGA                 TTCTAAAATTTTAAA  54 9
LPH40_RS07450 1849307 .. 1849330 + -19.6  -3.27498   GTGTTGTGTTACTGG          GAGGCCCCGC AGAT GCGGGGCCTC           TTGGTATGGCCTCTG 100 45
LPH40_RS07465 1852163 .. 1852179 +  -3.6  -4.59109   GGTCTCTCATCCTGT              GCGGCG GTGTG TGTCGC              TTTTTACGAGGTATG  66 80
LPH40_RS07470 NONE
LPH40_RS07475 1855226 .. 1855242 +  -5.1  -3.69323   GGGATGGCGATTTCG              GTTGCTT GAG AGGCGAC              TTTGCGTGCTCATAG  59 355
LPH40_RS07515 1866219 .. 1866245 + -15.9  -2.62616   TCTTGGGTATGGAGG         CTGACGCACGG TGATC CCGTGCGTCGG         TGGTGTCCCGGATGG 100 41
         ffs 1867620 .. 1867636 +  -5.1  -4.33754   TTATTGAGGTACCGG              CATCAGG CCG TCTGGTG              TTTTCAATTGTGGTT  69 352
LPH40_RS07535 1873104 .. 1873116 +  -6.9  -3.69069   CGATCATAGGTCTGG                GCGTG GCA CGCGC                TTCTGTTGACATTCC  63 422
LPH40_RS07550 1881902 .. 1881938 +  -9.3  -4.59081   GTTCTGAAGCACCAT    AATGCCCGTCGTCCGGT TGC GTCAGTCGACGGGCATG    TTTTCTATGGCTTTG  90 34
LPH40_RS07565 1887693 .. 1887712 +  -2.8  -3.68738   TGGAAGAGATTGGAT            TGTGGCTT TTAC AAGGCACG             TTATATGTTCGAATA  51 481
LPH40_RS07625 1902165 .. 1902179 +  -2.9  -3.90328   TCAGGTGAATTTTAA               CAAAA CTTAT TTTTG               TTTATCCGACTTCTG  54 103
LPH40_RS07635 1905391 .. 1905407 +  -4.3  -2.59191   GCAATTGTGCGGCGG              CTGCGTC AGC GACACGG              GTTCTGAACGTGTGC  44 2
LPH40_RS07640 1905892 .. 1905903 +    -3  -4.98255   TTTTTCTTTCGTAAA                CTAT CGAT ATAG                 TTTTTATCATTCAAA  71 86
        rnpB 1907120 .. 1907136 +  -2.9  -5.24129   TAAAGTTAAAGTTTG              TGTCGTG CGC CACGGAA              TTTTTTATCGCCCGC  77 209
LPH40_RS07660 1912487 .. 1912504 +  -3.4  -5.14563   AGTATTGTTTGACCG             CGGC-GA TTATT TCTGCCG             TTTTTTAATAACAGG  75 349
LPH40_RS07670 NONE
LPH40_RS07675 NONE
LPH40_RS07680 NONE
LPH40_RS07685 NONE
LPH40_RS07690 1916622 .. 1916643 +  -2.3  -3.41961   GCTAAGGAAGTGCGC           CATGATTGAG TTG CTCA-TCCTG           TTGATTGGTCCTGCT  45 17
LPH40_RS07695 NONE
LPH40_RS07700 NONE
LPH40_RS07705 1917688 .. 1917711 +  -6.1  -3.62775   CTTTTTGTGCATGCC          GAACACGACT GTCAG AG-CGTGTTC          TTCTTCCGGCGTGAT  61 293
        ugpC 1927362 .. 1927391 +  -8.5  -3.14132   CAGACGTGCTATCAA       TGGGCTTACCCGT CTCA GCGTGCAAGCCCA        TTGATGAAAGGGACG  64 162
LPH40_RS07760 NONE
        sdhC NONE
        sdhD 1929518 .. 1929528 +  -3.2  -3.00585   TAGTTCGTATCGCGC                 TCGG GAA CTGA                 TAATTTGATGTCCTA  45 15
        sdhA NONE
LPH40_RS07780 1932196 .. 1932206 +  -2.4  -2.85503   TTGGCCTTGGGTTGA                 AGCC TCT GGCG                 GTTTCGCTATTGCGG  40 89
LPH40_RS07785 NONE
LPH40_RS07790 1932919 .. 1932929 +  -5.4   -3.0264   GCCGTTTTTTATCAC                 TTGG GTT CCAA                 TGTTCAACCCACTTT  51 40
LPH40_RS07795 1934153 .. 1934184 +  -6.5  -3.51232   ATTCAGCCAGCAGAG      GCGCTGCGCTATG AATGAG CATGGCACAACGC       TTGCTTTGACAGGAC  61 8
        lolD 1934898 .. 1934917 +  -6.4  -3.62906   TGAGCGTGGGGCCCT            CGTGTGCA TATC TGCATGCG             TTGGTTCTTCTCTTT  63 38
LPH40_RS07805 NONE
LPH40_RS07810 NONE
LPH40_RS07815 NONE
        msbA NONE
        lpxK 1941907 .. 1941924 +  -4.9  -3.61103   TCTTGACCCATTTCA             CGCACACA GCC TGT-TGCG             TTTACCATCAAATTG  55 192
LPH40_RS07830 NONE
LPH40_RS07835 1944193 .. 1944205 +  -4.7  -2.56828   TTCTGGTGGCCGTGA                CGCCG TGT CTGCG                ATCTTATGGATCTTT  46 26
LPH40_RS07840 NONE
LPH40_RS07845 1947122 .. 1947135 +  -2.4  -5.28176   TTGCATTGGCATCCA               TCAG TCCGTC CTGA                TTTTTTGTGCCTGAA  76 429
LPH40_RS07850 1948143 .. 1948153 +  -3.2  -2.87527   CTCCTTTATCCTTGC                 GGGT CAG ATCC                 ATTTCGTCGTAGCTG  43 468
        pncB 1952187 .. 1952221 +  -5.8  -3.27725   TTGACAGGGCGAGAG    CAGCAATCCGCAGGT CAAGTT ACCT-TGGATGGCTG     TCATTTTGTTGGTAC  57 432
         def 1963814 .. 1963824 +  -6.8   -3.0169   CCTAATATTCCTCAT                 CAGG ATC CCTG                 TCATTTATGAGAATT  55 114
         fmt 1964746 .. 1964775 + -10.7  -2.70932   CGAGATTTGCAGGTC       CGTGCGTGAGCAAC GGT GTTGCAC-CGCGCG       TGGTTGCGGCGCGGG  72 17
        rsmB NONE
LPH40_RS07935 1968133 .. 1968152 +  -5.6  -3.07043   ATGTATTGAGTGCAG            CGGCGCTC CATC GAGTGCCA             TCTTCCGGTGATAAA  51 370
LPH40_RS07960 1972358 .. 1972413 +  -7.4  -3.12402   GCGGCCCAGGCGGGC GCGGTGGTCATCAGCGCCGCCAGGTGC CCG GCAT-TGAAGGCGCTGTGGGTTGCCGC TTCGGTGATGATTTC  57 373
LPH40_RS07995 1975935 .. 1975969 +  -7.9  -3.60971   AGTAGCATTTGATTA    GCATCCCTGTGATGGAG GTC CGCCGTCAC-GGGA-GC    TTTCACAGTTAGGAT  66 133
         cfa 1977433 .. 1977449 +  -2.9  -4.19817   GAGACATGTAATGCC              ATGACCA GAA TGGTCGC              TTTTCACTGGCTGCA  59 214
LPH40_RS08010 1978394 .. 1978410 +  -5.1  -2.59742   GGACTTTCACAGCGC              CACTCGT GCC ATGGGTG              CTTCTAAGACTTCCA  48 2
LPH40_RS08020 1979850 .. 1979862 +  -7.7  -3.71527   TGTTGTCATTCATCA                CAGGA CTA TCCTG                TTTGGATGATTGGAA  68 353
LPH40_RS08035 1981179 .. 1981201 +  -2.7  -3.55603   TATATCCTGATCATC          GCCCA-CATG AATT CATGATCGGC           ATTTTGTTTGATGAA  49 401
LPH40_RS08040 1981902 .. 1981922 +  -3.4  -3.72576   TTAAAAATTCTGCTA           TGTAAGCTT CTTG AAGCTT-CA            TTTCCTGCAAACGCA  53 51
LPH40_RS08045 1982386 .. 1982403 +  -4.1  -3.40022   TCTGTCTTGATCGGA             GAGGCAC CGTG GTGTTTC              TTAATGTATTCATTG  50 154
LPH40_RS08050 1982580 .. 1982591 +  -5.8  -3.07344   TGTCAGTTGAAGATC                GGCA GTCG TGCC                 TATATTGGAAAATGC  53 41
LPH40_RS08055 1982984 .. 1983008 +  -3.6  -3.36327   CTTCGCTAAACGTGT         GATCTGCGG CGCACTAA CCGC-GATC          TTGTCGATACAGTCG  48 24
LPH40_RS08060 1986539 .. 1986554 +  -6.2  -3.84808   ATCAGATACAGGCAT              GCTTAT AACA ATAAGC               TTATTGTGCGTTGAG  64 513
        polA 1990334 .. 1990365 + -15.1  -4.50943   AAGTGTCCGCTCTCC      GGCCTCGCCGACC TTCCTT GGTCAGCGGGGCC       TTTTATCGATTCTTC 100 256
LPH40_RS08075 1992081 .. 1992094 +  -5.9  -3.08327   AATCTAGCGTTGGAC               CGGCC TCAG GGTCG                TGTTCGCACTTTCCT  53 135
        carA 1993674 .. 1993688 +  -4.2  -3.30124   CGAATTGCCCGATCA               GGTGAC TTG GTTGCC               TTCTGAGGCGTAACA  50 406
        carB NONE
        greA NONE
LPH40_RS08095 NONE
        recJ 2000156 .. 2000166 +  -6.8  -3.39844   CGGGCTTCTAACAGT                 CTCC AGT GGAG                 TGTTTGACCTGTACG  59 42
        prfB 2001990 .. 2002004 +  -5.6  -2.82491   CGATTTAAAACGGCA               CCTGAG TTT CTCTGG               TGTCATCCCTATCTC  49 139
        lysS 2003624 .. 2003635 +  -5.8   -2.5598   ACGACGATATCGTGT                GTCG GATT CGAC                 CTATTCTACCTATGT  50 67
LPH40_RS08115 NONE
LPH40_RS08120 2007144 .. 2007159 +    -4  -3.27653   GTCCACCCAGATCTC              GGTGAT GCGT ATCATC               TCTTGTAATGAGACT  48 161
LPH40_RS08130 2011011 .. 2011029 +  -7.4  -3.16071   CGGTCCCGTTGTAAC             CACGATCA TAT TGCTCGTG             TATCTTGCTGTACGG  60 50
        murL NONE
        murD 2014014 .. 2014025 +  -3.6  -3.28712   CACTGCTGAGCGATA                GCGG GTGG CTGC                 TTCTGAACCAGGGCA  48 217
LPH40_RS12020 NONE
LPH40_RS08150 2014654 .. 2014667 +  -5.3  -3.55563   CGATAAAGAGATGAC               TCAAC ACTG GTTGA                TTTAAACAATCAAGT  56 42
LPH40_RS08160 NONE
LPH40_RS08165 2018619 .. 2018638 +  -5.8  -3.71873   GTGTGAGGTCGTTTT            TAAGGTCT TTGT AGATCTTA             TTTGCCTGTGGATCA  61 250
LPH40_RS08180 NONE
         rng 2023808 .. 2023819 +  -5.8  -3.60948   TTGTCTAGGATGTCT                GCTC TGTT GAGC                 TTTCCCCGTGTGTTC  59 175
LPH40_RS08190 2027704 .. 2027717 +  -4.5  -3.72374   ATCGTGCTGATGCAA               CGCGA GTGC TTGCG                TGTTTCTTGATCCGC  57 115
        tldD 2029398 .. 2029413 +  -5.4   -4.2123   TGAGTGAGGTTTGCT              TGGCTA TCTA TAGCCG               TTTGTTGCATGAATG  66 218
        pmbA 2031835 .. 2031853 +  -2.3  -3.05384   GGATCTGTGCTGGAT             GGTGCCG TGTGT TGCCACC             TTCCCTGACGAGCAC  42 152
LPH40_RS08220 2032854 .. 2032869 +  -5.4   -3.0644   TCATTCACGCTTCAA              TGCTGA CTGA TCAGCG               TCTTGCGCATTGGCT  51 95
LPH40_RS08240 2036495 .. 2036505 +  -2.4  -3.29511   GCGCCGCTTTCAGCC                 CGTG TGA CCCG                 TTGTACCCCAATCCC  45 19
LPH40_RS08245 2036866 .. 2036886 +  -7.5  -2.71144   CCATGTTGGTTTCCG            GCCACGTTG CAG TGGCGTGGC            TGGTTGGCAACCCTG  56 53
LPH40_RS08250 NONE
LPH40_RS08255 2039064 .. 2039076 +  -5.5  -3.05046   GCGGTGCTCGGTGAG                CGTGA TTG TCGCG                GTTTTGGCGACATCG  51 410
LPH40_RS08260 2039747 .. 2039765 +  -5.8   -3.2794   CCAATGATCGGTGAG             CGGGCACG TGC CGCGACCG             TTCGTATCACTCCAC  57 34
LPH40_RS08265 2040972 .. 2040989 +  -3.3   -3.2327   TGGATGACCATGACG             GGTGCCG ATGA TGGAACC              TTGGTGCTCAATTGA  46 208
LPH40_RS08270 2041994 .. 2042010 +  -2.1  -4.31397   TGGGATGTGGAATGC              CGGCAGC GGC GCTTACG              TTATTTTCTGGCGGT  61 376
        rpsJ NONE
        rplC NONE
        rplD NONE
        rplW 2056369 .. 2056383 +  -4.2  -2.51966   GCAGCCAATGTTTGA               GGTGTG ACC CATGCC               ATTGATAAAGTTTAA  44 26
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC 2058545 .. 2058570 +  -2.5  -3.36273   GCTGAGCGGTCCTCT         CGTCGCGTC CGTGAGGT GAGGTGACG          TTAATGTTACAGCCA  45 2
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN 2061105 .. 2061128 +  -2.4  -2.59971   TTTGAAAAGCTGATA          CTTGATTTGC TAAA GAGGATCAAG           GTTGCTCTCTCATAG  39 83
        rpsH NONE
        rplF NONE
        rplR 2062545 .. 2062566 +  -2.3  -4.35958   TGCGCGTGATGGGGG           GTTGAACTT CTAA AAGTTCAGG            TTGTTTCTTTAGTGG  61 13
        rpsE 2063250 .. 2063264 +  -2.8  -2.79098   ACGTGGTAAGAGCGT               TAGAGA GTT TCGCTA               TGATTGATGAATGCG  42 4
        rpmD NONE
        rplO 2063880 .. 2063892 +  -5.5  -4.09685   GGGTTTTGGTCGAAA                CTGCT GGT GGCAG                TTTTCAGGAGTAACA  64 0
        secY 2065333 .. 2065344 +  -3.6  -3.77912   TTTGTTGTTCTTGGC                GCTC CGAT GGGC                 CTTTTTTAGTTAATT  53 72
        rpsM NONE
        rpsK NONE
        rpsD 2067003 .. 2067015 +  -3.4  -4.15044   CGAAATAATTTACAT                TGGA AATCC TCCA                TTTGTTACAGGAGGG  60 33
        rpoA 2068045 .. 2068055 +  -2.6  -5.42131   ATATGGAATGCTTGG                 TTAA TAT TTAA                 TTTTTTCTGTAGTTC  80 22
        rplQ 2069055 .. 2069065 +  -3.2  -4.63592   AGAAAATCTTAATTA                 GGTT CGC GACC                 TTATTTTTCTTCCAG  66 423
LPH40_RS08470 NONE
LPH40_RS08475 2072108 .. 2072123 +  -3.4  -3.49048   CGATTTTAGAAAGAT              TTAATT CATG AATTAA               TATTGTTCATTAAAC  50 232
LPH40_RS08480 2074802 .. 2074814 +  -6.9  -3.18912   CATGTTGACTTTACT                GTGCC CAG GGCGC                TTCCTCAATCACTGG  57 248
LPH40_RS08495 2078100 .. 2078116 +  -5.9  -4.58663   GTGGTTGGGACAAGT              TTACGTT CCC AACGTGA              TTTTTAAACGATGGT  75 297
         tig 2083504 .. 2083516 +  -4.8  -3.39352   TTCCAGGAAGCGATC                CAGC AATAA GCTG                TTAGCTTTTGGATTA  52 17
        clpP 2084262 .. 2084281 +  -4.4  -3.46081   CTCGGGCAGCGCCCT            GAAGAGTTG ATC CAA-TCTTC            TTGATTAATTACATG  52 2
        clpX 2085765 .. 2085795 +  -5.3  -4.34444   GCTCTTGCAAGCTTA       CCCAAATGGCCTC ATAAC GGGGCCGTTGGCG       TTTCTGTTGTCTTAA  69 104
         lon 2088288 .. 2088310 +  -6.3  -3.99985   AAGGATCAAACAATG           CGCGTGTCA AGCAC TGATATGCG           TTATTTAAATGTGTG  68 9
LPH40_RS08530 2088799 .. 2088813 +  -2.7  -2.75064   ATGCCGTAAACTTCC               CCGCC GACTA GGGGG               TGCTTAGCTCAGCGG  42 15
LPH40_RS08535 NONE
LPH40_RS08540 2089054 .. 2089073 +  -3.6  -2.57132   AAAAGCAATAGTTTC            TTCCTGTT GTTA AAGAGGAA             CTTCTAAAGCGCGGA  42 87
LPH40_RS08545 2091318 .. 2091334 +  -3.6  -4.30791   GAATCACAATTGTAA              CGCAGT CGATA ACAGCG              TCTTTTTGTTTGGTT  60 26
LPH40_RS08550 2093477 .. 2093489 +  -2.7  -4.04206   GCCCCGCATGCACGC                TTGAA TGC TTCGA                TTTATCTGGCGCTAA  56 370
LPH40_RS08555 2098312 .. 2098324 +  -2.6  -2.57795   GGTGTTCAAGCTAAT                GGCG CTTGC CGTC                TGAATTCGTAGTACA  41 27
LPH40_RS08560 2099402 .. 2099420 +  -3.1  -2.72364   ACAAGAAGACTAACC             TCGACAA TGGCT TTGACGA             CTTATAGTTGCTGCT  41 0
LPH40_RS08565 NONE
LPH40_RS08570 2100234 .. 2100244 +  -3.2  -3.56844   AGATGTGATCAGCGC                 TCGT TTT ACGG                 TATTTCATTACTCGA  50 40
LPH40_RS12030 2101183 .. 2101194 +  -4.4  -4.13767   TGGCTGAGCAAGCAT                CATG ACCG CATG                 TTTTGGACTGCACCG  60 99
LPH40_RS08580 2101449 .. 2101464 +  -4.6  -2.97902   ATACTCACCGCCATT              GGCCTC ATAC GAGGCG               TGTGTGCTGATGTTG  49 67
LPH40_RS08585 NONE
LPH40_RS08590 2103518 .. 2103529 +  -3.6  -4.10657   CCTGTGATGTGCATT                CCGT TGCT GCGG                 TTTTGACGGATGTGG  58 430
        rpmB NONE
        rpmG 2106806 .. 2106826 +  -4.7  -3.57651   GGGTTCGTTGTGTAC            TTGGTTCTG AGT CAGAACAGA            TTCTGTGATGTGGCC  55 135
         cls 2108624 .. 2108636 +  -6.9  -2.55668   CATGATGCTGACGAC                CTGCC TTG GGCGG                CTTCCTGTAGCGGTA  52 364
LPH40_RS08635 2112969 .. 2113024 +  -7.4  -3.12402   GCGGCCCAGGCGGGC GCGGTGGTCATCAGCGCCGCCAGGTGC CCG GCAT-TGAAGGCGCTGTGGGTTGCCGC TTCGGTGATGATTTC  60 373
LPH40_RS08650 2114780 .. 2114797 +  -2.7  -2.83345   TCCATCAATTGTATG             TAGCTAC GAAC GTAGATA              TAATTGCTGTATGAA  42 58
LPH40_RS08655 NONE
LPH40_RS08660 2115507 .. 2115526 + -11.4   -5.7946   GCGATTTCCCTCCAA            GCCCTGTG CACC CGCAGGGC             TTTTTTTATTGAGCA 100 169
LPH40_RS08665 NONE
LPH40_RS08670 NONE
LPH40_RS08675 NONE
LPH40_RS08680 NONE
LPH40_RS08685 NONE
LPH40_RS08690 NONE
LPH40_RS08695 2118546 .. 2118559 +  -2.3  -3.67775   GCATCGTCGCTGATT               CATGG TATG CCTTG                TTGTTGCATGCCGAT  50 28
LPH40_RS08700 2119351 .. 2119384 +  -3.1  -4.21631   CACTGCTGCACTTGT     TTTTGCGGACCGATT CTCT GATCGGTTTGCCGGA      TTTATTCAATACGTT  59 398
LPH40_RS08705 2121023 .. 2121036 +  -6.7   -3.4759   GCAGATCTTTGACGA               TGGTG TATT CACCA                TTGATTGTCATGACT  58 302
        typA NONE
LPH40_RS08725 2125214 .. 2125233 +  -5.8  -3.55946   TGTAGAGATAATCAA            GGGTATGAT GAA ATCA-ACCC            TGTTCTTTGGAGTGA  59 133
LPH40_RS08730 NONE
LPH40_RS08735 2126946 .. 2126965 +  -2.2  -2.67512   TAGTAATAATTGATT            TTTCAAAT AATA ATATGAAA             TGGGTTTGAATATAT  39 28
LPH40_RS08740 2127500 .. 2127511 +  -3.6  -3.97836   GATGAAAACTTCCTA                CTCC TGAT GGGG                 TTGCTTTTTATTATT  58 130
LPH40_RS08745 2127925 .. 2127941 +  -3.7  -3.74361   ATTTTAAAATTGGAG              CCGTTAT TTT ATAACAG              TTCTTGCTAAATCTG  53 71
LPH40_RS08750 NONE
LPH40_RS08755 2129015 .. 2129043 +  -3.8  -4.58698   TCTTTGGAATTTTGC        GGGGCTGTATTA AGAAC TGATGCCGCCTC        TTCTTTTTAATTTGA  68 255
LPH40_RS08760 2131758 .. 2131782 +  -8.7   -3.3514   AAGCGGCTCCTTGAC          TCGCTTGATTT ACA AAATCAGGTGA          TTGTGGCATGTCGAT  66 449
LPH40_RS08775 2139148 .. 2139202 + -15.3  -3.06492   ATCAGTTATCTTTAC GGTCATGACCAAGCTGCATCTCAATAT GTT GTATTGAGATGCAGCA-GGTC-TGCCC TCTTAAGATGCATGA 100 376
LPH40_RS08805 2149803 .. 2149815 +  -4.8  -2.76708   ACCTCGCTTTGGGGG                CAGC ATGGG GCTG                ATTGTATCTGGCTTG  47 72
LPH40_RS08810 2154073 .. 2154083 +  -5.4  -3.43689   GTGCGCGTCAATGAG                 CGAT GCC ATCG                 TGTTGTGTGTCTTTG  54 509
        prpB 2155891 .. 2155918 +  -7.6  -2.90075   CGCGTTGCTCCTGGA        GGCCGAGCACAC GTAT GTGTGCCTGCCC         TGTGATTGCCGGAAC  59 353
LPH40_RS08825 NONE
LPH40_RS12035 NONE
        acnD 2159424 .. 2159447 +  -7.4  -4.15044   CGTCTTGCTTGTTCT          GGTGGCCATG CCGG TGTGGCTACC           TTTGTTAGGGAGGAG  73 256
        prpF 2160837 .. 2160847 +  -3.2  -3.68302   GGTGTATTGCGGGGC                 CATC CTT GGTG                 TTGTTGGCGTGTTGG  53 105
LPH40_RS12040 2161163 .. 2161186 + -12.4  -2.90194   AGTCAGGCGCTAGAT          GACGTGGGTG GGCG CGCCCGCGTC           TGTGCTTGCAGCCAT  80 57
LPH40_RS08850 2164652 .. 2164662 +  -3.2  -3.76952   TCTCAGTGTGGCGCT                 GTAC GGT GTGC                 TTTCGGTTGCCTGGA  53 104
LPH40_RS08855 2170038 .. 2170083 +  -8.3  -2.66634   CTATCTGTGGGGATC TACCTGCGGCGGGCAGGA-AAG GGT CTTCTCTTGCTCGCTTCAGGCG TGCTGTGGTGGCGTG  61 215
LPH40_RS08875 2174887 .. 2174901 +  -4.2  -2.64616   CAAAATGCAAGCTTC               TCCCCA GGT TTGGGA               TGATGTCCATGCAGG  44 326
         orn 2181070 .. 2181082 +  -4.8  -3.40689   GGGCAACCTTTAGAA                GCAC TTCCT GTGC                CTTTTTCAAGTTGTC  52 516
LPH40_RS08910 2185081 .. 2185096 +  -5.4   -3.1582   CCGGATCGTTATTGC              CGGCAT GGTG ATGCTG               CTTTTGGTGCAGTGA  52 62
LPH40_RS08915 2185656 .. 2185673 +  -2.6  -2.80779   GCTGCTCTTGTGAAA             GCAGGC ATACTC GCCTCC              TCATCTTGCTGTTGA  42 52
LPH40_RS08920 2186288 .. 2186299 +  -4.4  -3.74526   TCAATCGGCGCGACA                GTGT ATCT ACAC                 TTCTTCAGTTGGTCG  55 128
LPH40_RS08940 2195849 .. 2195865 +  -6.5  -3.08467   GTAGTTCTCTTTGCA              GCGTTGC AAT GCAACGG              TCTGTCGTTTATCAG  55 256
LPH40_RS08945 NONE
        lipB 2197288 .. 2197298 +  -4.6  -2.95341   CTGGTTTTTTATGTG                 CGGT CTA GCCG                 ATTTGGTATTGCGAT  49 18
        lipA 2198349 .. 2198364 +  -8.2  -2.67477   CAATCGGATGCTACA              GCGCTC TAAC GGGCGC               TGATATCGCTTCATT  61 52
LPH40_RS08960 2199465 .. 2199477 +  -3.4  -4.10744   GGTGGATGCAATGCA                TGCT AAAGC AGCA                TTATTGTTTCGATGC  58 438
LPH40_RS08965 2200447 .. 2200459 +  -7.7  -2.80344   CAGATCAACGCGCAC                GCAAG TTA CTTGC                ATTATTGGGTGAGCA  59 369
LPH40_RS08970 2200665 .. 2200681 +  -5.1  -2.80493   CAGAGAACATGGACA              TCTTGGT CAG ACCAGGG              ATTGTCTCTTGCAAC  49 50
LPH40_RS08975 NONE
LPH40_RS08980 2201957 .. 2201970 +  -8.1  -3.90112   TGGTGATTGGGTCGT               CCTGG CTGG CCAGG                TTTGATTGAAGGAAA  70 141
LPH40_RS08995 2205839 .. 2205855 +  -8.7  -2.87794   TTGTGTGTCACCTGC              CTGTGTC GGT GACACGG              ATTTCCTGGTCCATT  62 14
LPH40_RS09005 2209193 .. 2209220 + -15.6  -5.76633   CTTAGTTACCTGCGC        CGACGCCCCG TATGAGCC CGGGGCGTCG         TTTTTTTATGTCTCA 100 48
LPH40_RS09010 2211006 .. 2211018 +  -2.7  -3.65542   GTGTTGCTGATTTGA                TCTTT GGT GAAGA                TGTTTTGGGGATCGG  51 48
        kdsA 2212371 .. 2212382 +  -2.2   -4.3953   AAGATCAGACAGCAT                CAGC TGGG GTTG                 TTTGTTGTCCTTAAC  61 441
         eno 2213867 .. 2213888 +  -5.1  -2.72839   GCGATGCGTTCGTTT           CGCTCAAGT GCTG ATTTGTGCG            TAATTGGCGCTGGTT  48 12
        ftsB NONE
        ispD 2214929 .. 2214941 +  -2.7  -3.91144   GTTGTCACGACGTGT                TTGAG TGG CTTAA                TTTATGGAGTATCAA  54 22
        ispF 2215578 .. 2215591 +  -2.3  -3.89348   GCAAAGTGAAAGTGT               CGCTC TTGA GATCG                TTATTGTGTAGGGTT  52 140
LPH40_RS09055 2221251 .. 2221261 +  -6.8  -3.51411   GTTGACTTCGATGGT                 TGCC GTT GGCA                 TTCGTTTCCCAGCGT  58 457
LPH40_RS09080 2226031 .. 2226043 +  -3.5  -4.16371   TTTAATATAAAGCCA                TAAAA TTT TTTTA                TTTAATTATTTAGTG  60 98
LPH40_RS09085 2226481 .. 2226491 +  -2.6  -3.70919   GTGTTTATCTAGAGA                 TTTT CTA AAAA                 TTATTGAAATTTAGG  51 43
LPH40_RS09090 NONE
LPH40_RS09095 2226885 .. 2226917 +  -2.4  -2.56914   CTATCAAGGTTACAA     TAAAAAAT-AATAAA TCCG TTTGTTGATTTTTTA      TAAATTAATCAAGTC  39 16
LPH40_RS09100 NONE
LPH40_RS09105 NONE
LPH40_RS09110 NONE
LPH40_RS09115 2228075 .. 2228104 + -12.2  -3.13403   TTTAGCTTCGTTTAT       GCCCCTTCATAG TTAATT CTCTGAAGGGGC        TCTTGATAGCAGCAC  82 121
LPH40_RS09120 NONE
LPH40_RS09125 2228960 .. 2228986 +  -7.3  -2.74792   TTAAGTTTAATCTGT         GTGGGCACT ATGATTTTG GGTGCCCAC         CTTTAAAGGTGATGA  57 37
LPH40_RS09130 NONE
LPH40_RS09135 2230037 .. 2230047 +  -3.2  -3.60627   AGTGACGTAGGCATA                 GCAT GAT GTGC                 TTTCAGGTGGGATCG  50 415
LPH40_RS09140 2231924 .. 2231936 +  -6.3  -2.60496   TGCCATGGCGATTCC                GTATG ATC CATAC                ATGTTTCACGCAGGG  53 46
        mreD NONE
        mrdA NONE
        rodA 2236814 .. 2236830 +  -2.3  -3.02511   ACAATGCTAAGCATG              CAGAA CGAGTGT TTCTG              TATTGAAAAAGTCCG  42 107
        queA 2238284 .. 2238297 +  -4.5  -4.09923   TGGACAAGAGATGAT               GTGGT AGGA ACCGC                TTGTTTCATTGAATT  62 436
LPH40_RS09170 NONE
LPH40_RS09175 2243206 .. 2243218 +  -4.1  -4.10161   AAATTCATATGTTGA                GTAAG CCT CTTGC                TTTTAGCCAGTCGTA  60 488
LPH40_RS09205 2248309 .. 2248329 + -10.4  -5.03145   TTGATGTTGTTAGAA            CGTGCTGC TGAGT GCGGCACG            TTTTTTCAACCGTTC 100 60
LPH40_RS09210 2249603 .. 2249629 + -12.3  -3.63068   TCGCACATAAAAAAA         CGGCGGACC CGACGAGGC GGTCCGCCG         TTTGAGGTGCTGTAG  88 378
LPH40_RS09230 2255294 .. 2255309 +  -6.8  -3.61715   TGGCATGGCTGTCAG              TGCAGC ACGT GCTGCG               TTGTTGCAGAGCGTG  63 144
LPH40_RS09235 2256377 .. 2256399 + -12.8  -3.64103   TGGTATGAAAACTCA           GTGTTCAGCG CAT CGTTGAACAC           TTTCGACTCTGAATG  90 224
        pdxH NONE
LPH40_RS09260 2261345 .. 2261371 + -12.2  -2.87211   GTCAGTGGATTTGTG         TGGTGGTGCCGC TCA GCGGCCCTGCCA         TGTGTCACGCAGCGT  80 517
LPH40_RS09270 2263786 .. 2263797 +  -5.8  -2.69151   GATCGGTGTTTCTTA                CGCA GTGG TGCG                 TGGTGTATGACGGAC  51 228
LPH40_RS09275 NONE
LPH40_RS09280 2265298 .. 2265319 +  -5.1  -2.70525   GAGGTCTGCCAAGAG           CGGTCATGG TTCG TCATGACAG            GTTAATTTCCGAACA  48 368
LPH40_RS09285 2266642 .. 2266653 +  -5.8   -4.8667   GTTCAGATGTGGCAA                CCTG TATT CAGG                 TTTTTGTGCCGTGTG  81 185
LPH40_RS09290 2266975 .. 2266988 +  -4.5  -3.18681   ATGCTGCTGGGTGTG               CGGCA AAGG TGTCG                TTGGTACGCTTCAGG  50 71
LPH40_RS09295 NONE
        cysT NONE
        cysW NONE
LPH40_RS09310 2271515 .. 2271528 +  -3.7  -4.72986   GGTTGATGGCCGTAT               CGGTG GCAA CTCCG                TTTTTGCTGGGGATG  69 291
LPH40_RS09345 NONE
LPH40_RS09350 2275639 .. 2275672 +  -5.9  -3.18681   GGACAGATCGCCGGT     CATCTGCACCTTGGG GGTG TCCAAGGTGACGCTG      TTGCTGGCCTTGAGG  55 161
LPH40_RS09405 NONE
LPH40_RS09410 2281859 .. 2281871 +  -9.1  -3.73402   GCAGCCTGATCCACG                CTGCG TAA CGCAG                TTTGCTCACACCTAT  74 32
LPH40_RS09420 NONE
LPH40_RS09425 NONE
LPH40_RS09430 2284622 .. 2284657 +  -5.2  -3.35813   GGCGTCGTCTGCAAA    GCACGTCCGGACTGAC GCGT GCCAAGCCGTGCGTGC     TTCGTTGACCTGAAA  54 11
LPH40_RS09435 NONE
LPH40_RS09440 2285871 .. 2285893 +  -6.2   -3.2794   TTACTAGATTAATCC           CGATGGCAAC CAA GGTGGCATCG           TTGCTATGAATGAAG  57 330
        rpoD 2289511 .. 2289521 +    -4   -3.6106   TTAGCTGTTCATTAG                 CATT ACA AATG                 TTTAGCGATGTTCCC  52 127
LPH40_RS09455 2290356 .. 2290366 +  -6.8  -3.26842   TTGCGCGTCTTGGGA                 GACG AGT CGTC                 TTGCTCGATTGTTTT  57 171
LPH40_RS09465 NONE
LPH40_RS09470 2296766 .. 2296778 +  -2.7  -4.20084   CCCTCCGCTTCTTCG                CATTT TTG AGATG                TTTTCCATGAGTGAT  59 17
LPH40_RS09475 NONE
LPH40_RS09480 2300017 .. 2300028 +  -7.2  -3.18239   CCACCTGCGGCATTG                CGGC TCCA GCCG                 TTGCTGAACTATCTG  60 504
LPH40_RS09495 NONE
        cyoE 2305801 .. 2305815 +  -4.4  -4.79955   GTTTTTCATTGTGCT               TTATTT TTA AAATAA               TTTTCTTGTGGCTGT  71 514
LPH40_RS09505 2307389 .. 2307403 +  -7.8  -3.12999   GAAGCACGGTCACGT               CGCGTT GGC AGCGCG               TTACATGTAGCGTGC  62 323
LPH40_RS09565 2319241 .. 2319263 +  -3.2  -2.78596   AACCAATTGCACGGC           GGTGTCGACG GCA CGACGGCGCA           TATCATCCACGAGTG  43 49
LPH40_RS09570 2319936 .. 2319955 +  -6.4  -2.73875   CGCCAGCGGCTGGGT            GAAACCCG ATGA CGGCTTTC             TGGTCTTGGACCGCA  53 145
        fabD 2328001 .. 2328014 +  -3.8  -3.42702   CCCCTTATTACTTTG               CTGC CGTTAT GCAG                TGTTATTCACTCATC  50 79
        fabG 2328845 .. 2328864 +  -3.4  -3.68325   GATTGTGATTATGCT            GCGGTGCA TGGT TCCCCCGC             TTCTATTACACTATA  53 83
        acpP 2329247 .. 2329264 + -14.1  -3.41738   TGCATCATCTGCATG             GGGCCGC TGCT GCGGCCC              TGTCTTTATTGCAAA  93 79
        fabF 2330619 .. 2330645 +  -8.6  -3.17941   CTTGCCAAGTGGGGA         GGGGAGCATCCC TGA GTGATGCGCCTC         TTAATAGGGTGTGCT  64 56
LPH40_RS09605 NONE
        mltG NONE
LPH40_RS09615 NONE
LPH40_RS09620 2334648 .. 2334664 +  -2.2  -3.15574   CAACTCGGATAAGTC              GACACA CACCA TGTGAC              TGTTACTGCGCTTGA  43 10
LPH40_RS09625 2335097 .. 2335120 +  -3.8  -3.70037   TGGATTCTGCTAGGT          CTCGGCTTCA CGTG TGGAGATGAG           TTTGCCTACTGGTTA  55 323
LPH40_RS09640 2340651 .. 2340668 +  -6.9   -3.3782   GATGGTGTCGTTGAC             GCCGTGC AGCA GGACGGC              TTGGTTGAGTAACTG  56 506
         efp 2342107 .. 2342120 +  -3.8  -3.24032   GGGAGTACGTCTCGC               GGGT GAAATA ACCC                TGTTCCTTGGCGGCT  48 15
LPH40_RS09655 NONE
        ubiG NONE
LPH40_RS09665 NONE
LPH40_RS09670 2345764 .. 2345784 +  -2.5  -3.05596   GTGGAGATTGAGGGG            GGATGGAAG TGA TTTCTTTCC            TTGCCTGCGGGAATG  42 30
LPH40_RS09675 2345934 .. 2345946 +  -6.9  -2.78216   CTGCTGTAGCTGGCA                CGGCG TGA CGCTG                TCATTGCTAAACCTG  54 32
LPH40_RS09715 2354061 .. 2354074 +  -2.3  -3.90112   GGCGGCGGCGGTCGA               GCGGT TGCA ACGGC                TTTGATTGGGAGGAC  52 7
LPH40_RS09720 2355023 .. 2355040 +  -5.5  -4.63218   AGTATTGGGCCATGG             CCGCG GCCTTGAG CGCGG              TTTTATTGACGCCGC  73 140
LPH40_RS09745 NONE
LPH40_RS09750 NONE
LPH40_RS09755 2360703 .. 2360725 +  -3.4  -3.93369   GTAAGCCTTACGTAT           TGGTGGATTC AAT GAATCTGCAA           TTTACTTCACATTGG  55 440
LPH40_RS09760 NONE
LPH40_RS09765 NONE
LPH40_RS09770 NONE
LPH40_RS09775 NONE
LPH40_RS09780 2368698 .. 2368714 +  -2.1  -3.36803   CCATATGGTGCGCTT              CCAGCAG TAC CCACTGG              TTGTGGGTGGGGTTG  45 231
         cmk 2373856 .. 2373876 +  -8.9  -3.92522   TGTTGTAGACAGGCT            CCGTTGCGC GAT GCGTGGCGG            TTTATCCACTTAAAC  76 121
        rpsA 2375695 .. 2375721 +  -3.7  -3.95747   TCGGCCTAGGTGTTC        TGCCTGG-ACCG ATTC CGGTGTCAAGCA         ATTTTTTGTCTTTTA  55 82
LPH40_RS09820 2376062 .. 2376087 +  -3.3  -3.34962   CTGAGTAACCAGTTC         TGATCGGTTAA GCTA TTGGCTGATCG          TTCTCGGATGTGACC  48 33
LPH40_RS09825 2376389 .. 2376413 +  -2.1   -3.0894   CTGCGTCCTACCGAT          GGATTGCATTG ATC CTATGGAATTC          TTGGATGAGTGGTTC  42 14
        lapB NONE
LPH40_RS09835 NONE
LPH40_RS09840 NONE
        galU 2381412 .. 2381440 + -10.4  -3.01924   CAAAGATGCCCAGCA        TACGTCGTCC TTATCTTCT GGACGACGTA        TCTTCAGGCGGCGTG  72 67
        folD NONE
        guaB 2384180 .. 2384191 +  -3.6  -5.14965   GATTTCCTATGTGTC                GCGT TGCT GCGC                 TTTTTTCCTGAGCAT  75 163
        guaA 2385965 .. 2385977 +  -4.8  -3.57144   ACCGTTTACTATTCG                GACC AAACC GGTC                TTTGCAGGTAAAACA  55 181
LPH40_RS09865 NONE
LPH40_RS09870 2386887 .. 2386909 +  -5.5  -2.92475   CCGCAGGTGGTTGAT           CTGTTGCGC CCGGC GCACGACAG           CTTTGTGGCGCTACA  51 98
LPH40_RS09875 2387480 .. 2387498 +  -3.7  -4.19817   CATGCTTGGCGTGAA             CCCGCTC GGGTA GGGCAGG             TTTTGCGTAGGTAGA  60 106
LPH40_RS09910 NONE
LPH40_RS09915 2394695 .. 2394710 +  -2.4  -3.14931   TTGCTAAGATGGCTG              CCGGGT TAAT GCCGGG               TTAATGCCGGATAAC  43 6
LPH40_RS09920 2395745 .. 2395764 +  -4.2  -4.32177   GTGGCTCGGCGTGGG            GGGCATGC ATGC GCATGGTC             TTTCTTATGGCATCA  65 112
        rplU NONE
        rpmA 2399876 .. 2399891 + -11.8  -4.77867   CATCACGGCTAAAGG              CCCCGC TATA GCGGGG               TTTTGTGTTCTCTAT 100 74
        obgE 2401227 .. 2401243 +  -2.9  -4.88067   CTGTCAACCGACTCT              TATGGCG GGC CGCTTTA              TTTTTATGAATCAAT  74 183
        murJ 2403275 .. 2403298 +  -4.4   -4.7629   GTGACGTATCACCAC          GCCCGGCCAT CCCC GTATCCGGGC           TTTTTGGATTGATCA  71 142
LPH40_RS09955 NONE
        ileS NONE
        lspA NONE
        ispH 2409066 .. 2409082 +  -7.9  -3.53012   CCAGGCGTTCGGGCT              GCCAGCG GTC CGATGGC              TTTGCAGGACAGACA  66 171
LPH40_RS09975 2409211 .. 2409233 +  -4.8  -5.07523   CATGATGTAGCGGAA          GGCCGT-CC ACTTAA GGTGCGGCC           TTTTGTTTGTCTCTC  80 39
LPH40_RS09995 2412755 .. 2412770 +    -9  -3.29471   TCACCACCATCTTGC              GACGCT CGTT AGCGTC               TTGCTCTCCTCAGGC  69 230
LPH40_RS10005 2413677 .. 2413691 +  -4.2  -3.67597   CACTACAGCGTCATT               CGCG CCATCCC CGCG               TTATTGCCTAACGCC  55 363
LPH40_RS10010 NONE
LPH40_RS10015 2414731 .. 2414757 +  -2.2  -3.01924   TTGCTATCTGGACAA         TCACGATGCC GAGGCAG GGCATGGTGC         TGTTGCCCACCGCTG  42 334
LPH40_RS10020 2414899 .. 2414917 +  -3.8  -3.37344   GTCGGATTATCCTTG             CGTCGG AAGGGGG CTGACG             TTCGTTCGATCAGAC  50 9
LPH40_RS10030 2415739 .. 2415749 +  -2.4   -3.9392   GACATGCCTGCTGGG                 GGGC TGC GCCA                 TTGTTTCGGATGACG  52 192
LPH40_RS10115 2439145 .. 2439159 +    -7  -4.65494   TGGAAGTACACGATG               CTCCCC CCT GGGGCG               TTTTCTATGTCATTT  80 41
        grxD 2441569 .. 2441580 +  -5.8  -3.13728   TCCCTGGGCGACATT                CCTG TTTC CAGG                 TTCAGTGTGACTGCT  55 75
LPH40_RS10130 2442018 .. 2442031 +  -3.8  -4.26202   GTTGGGTGGACATGC               CAGG GATTTG CCTG                TTTGTTCGTGGCTCT  62 199
LPH40_RS10145 2446034 .. 2446047 +  -2.3  -2.57069   AGGAACGGCTGCGTA               GTAGG TAAA CCAAC                CCTTTCTTTCATCCA  39 39
LPH40_RS10150 2447160 .. 2447172 +  -3.3  -2.89081   CAAGAAACCTAAGGA                GGCCA TCA TGTCC                ATTATTGCTTCGCTC  43 29
LPH40_RS10155 NONE
LPH40_RS10160 2448522 .. 2448552 +  -7.6  -3.46647   GGCGCCAATGGCATT      GCGGAGAGCAGCG GAGTGA CG-TGATCTCCGC       TCTTTCGTGCCTGCG  66 60
LPH40_RS10170 2450358 .. 2450371 +  -3.7  -3.36135   TTCGTGATTGATAAC               GCGAC CTTG GCCGC                TTGATTAAACATTAT  48 8
LPH40_RS10175 2451435 .. 2451445 +  -2.4   -5.1101   TCCATAAGCATTGAT                 CAGC AGT GCGG                 TTTTTTCGATGCTGA  73 27
LPH40_RS10180 2452120 .. 2452137 + -11.3  -3.17685   TTGAAGTAGCGACTC             GCGTGGA TGCA TCCACGC              TTCCGTGTGTGCTTC  76 521
LPH40_RS10185 2452659 .. 2452684 +  -4.8  -3.53091   TGAGCTGCCACTGAC        GGCC-TCACGTC CAGT GA-GTGATGGCC         TTTCCAGAACGACAT  55 27
LPH40_RS10190 2453872 .. 2453912 +  -5.4  -3.04144   TCGGACGAAAGCGTA C-GATTGAGGCTGCGCGCA TGGC TGCACGCGGTTCCAATCCG  TGTTCGCGCTGCGCC  48 434
        queF 2462383 .. 2462395 +  -3.3  -3.85698   TGTGGATGTGGTGTT                TGGGC TTT GTCCG                TTTGTACGAGGCAGC  55 52
LPH40_RS10215 NONE
LPH40_RS12050 2463249 .. 2463276 +  -2.8  -2.52623   TGAGAGAATAGTATG        GTTAG-GACGATG ATG CATGGTTGCTAAC        GTCTTATACACGCGA  40 116
        leuC 2467562 .. 2467579 +  -2.7  -3.10493   AAATCAGCCGAATGG             TCGATCCA TAT TGGG-CGA             TATGTGTGTTGGCAG  45 118
        leuD 2468713 .. 2468728 +  -6.1  -2.91997   TGGCCAATATCGGTT              CCGAC GTTGTG GTCGG               TCGTTGTGTGTCGCA  52 319
        leuB 2470319 .. 2470329 +  -5.4  -3.47762   GACATATATTGCAAT                 CTGT TTC ACAG                 TCTTTAATCGATGTT  56 242
LPH40_RS10245 NONE
LPH40_RS10250 2472982 .. 2473001 +  -2.2  -3.69605   TTTCAGGGATTTAGT            TCTGATGCA CGG TG-GTCAGA            TTCGTTTTAAGTAAA  50 98
LPH40_RS10255 2474629 .. 2474641 +  -4.8  -3.14134   TCACGCATAGTTGGA                GCAG GGGAG CTGC                TATGTTAATGCGTAT  50 57
LPH40_RS10260 NONE
LPH40_RS10265 2477317 .. 2477328 +  -4.4  -3.57462   TGTGTTTGTTCTATT                GACA GTGA TGTC                 TTTGCCCGTGACCTG  52 343
LPH40_RS10270 2478789 .. 2478799 +  -3.2  -4.24786   TGCATGGAGCAGAAT                 CCGA GGG TTGG                 TTTATGTGTTGTCAG  60 226
LPH40_RS10275 NONE
LPH40_RS10280 2480735 .. 2480747 +  -2.7  -4.15106   GGTTCTTAATTCATC                CATTT TTA AGATG                TTTTGAAAATTCATA  59 32
LPH40_RS10285 2482062 .. 2482081 +  -7.2  -3.36569   TGTAGAAGTATGGAA            TCATGCAT CTTA ATGCATGG             TGTTTGGAGAATTAG  62 106
LPH40_RS10290 2483844 .. 2483855 +  -3.6  -3.83169   GCACTTGTGTATTTA                GTGC AGAA GCGC                 TTTGATGGCTTTGTA  55 254
        rlmD NONE
LPH40_RS10305 2486735 .. 2486755 + -11.9  -3.78436   CTGCTGCTGAGCAGC            GATGCCAAG AGA CTTGGCGTC            TTATTGGTGTGAATT  85 118
        nagZ 2487921 .. 2487931 +  -5.4  -2.52208   TTTATTTGAACGATT                 TGGA ACA TCCA                 CTTGATGCCTACTTT  48 10
LPH40_RS10315 NONE
LPH40_RS10320 NONE
LPH40_RS10325 2489633 .. 2489658 +  -7.5  -5.13527   ACGGCCAATGATTTT         GGCGACGTTCA GTGA TGGGCGTCGCA          TTTTATTTATTAGTT  88 116
LPH40_RS10330 2493599 .. 2493616 + -11.3  -5.77632   CTCAACACCACTGTG             GAGCCAC GTTT GTGGCTC              TTTTTTTGTGGTTTT 100 69
LPH40_RS10340 NONE
LPH40_RS10345 2495289 .. 2495307 +    -3  -4.24413   AGATCGACGGGGTAC             CAAGTAGC ATG GCGACCTG             TTGTTTGTTCATGCC  61 287
         fur 2496094 .. 2496106 +  -9.1   -3.6336   GGGATCGTCCCGCTC                CCAGC GGC GCTGG                TTATATCTCCTGTAA  74 148
        hrcA 2498931 .. 2498944 +  -3.1  -3.08173   GGCACGGCACTGGAG               C-CACC GAT GGTGCG               TTAGGTGAGGTTAAT  43 8
        grpE 2499671 .. 2499687 + -11.5  -2.83522   CACATTTGAACCAGA              CCCCGGC ACG GCTGGGG              ATTTGATGCAAAACT  76 109
        dnaK 2501659 .. 2501694 +    -9  -4.27686   TGAGGTGGAAGGACA    CTGCGAATGGGTGAGGC TAA GCTTTGCCC-TTCGCTG    TTTTCCCTGGTTTTG  80 52
        dnaJ 2503058 .. 2503068 +  -6.8  -4.72007   GACAGTTTCTAGCCC                 GTCG ACA CGAC                 TTTATTTTGGTCCCG  80 203
LPH40_RS10385 2504769 .. 2504781 +  -6.9  -3.53224   GAGGGTTTACACATT                CCGGC CAA GTCGG                TTTCCGAAGAGCGTC  61 488
LPH40_RS10390 2506621 .. 2506646 +  -3.2  -3.45788   TGTGGCAGAATCGTT         GCGTTCCG TGGGCATGTT CGGGGCGC          TGTTCTGTTATGCCA  50 269
LPH40_RS10395 2507075 .. 2507085 +  -3.2  -3.55447   TTTTTAATACCTTTG                 CTTG CGG CAGG                 TTATCTGATGGATGG  50 34
         lgt NONE
LPH40_RS10405 2508833 .. 2508848 +    -4  -3.00918   ATCCGGCCATCAAGG              CAC-CTG TGG CAGTGTG              ATTTATGGTGTCAGT  47 9
LPH40_RS10410 2509864 .. 2509882 +  -5.2  -3.36452   GTGCTGAATAAGTAG             CTGTGGAA CGA TGCCGCAG             TTGGTATTAGGGACT  54 217
LPH40_RS10515 2538001 .. 2538011 +  -2.4  -4.08394   GCAATGCTTTAACAG                 GACG TGA CGGC                 TTTTGGAAGAGGTAT  55 56
LPH40_RS10525 2542521 .. 2542532 +  -5.8  -3.03124   CAGCAGGATTGAGTC                CCCT GGAT AGGG                 TATTGGGAGCTGGGC  53 120
        apbC 2551369 .. 2551381 + -10.5  -2.55213   CAATCCGGCACACAG                GGCCG CTG CGGCC                TGGCTTAGATGCGTA  64 498
LPH40_RS10570 2554536 .. 2554549 +  -2.3  -3.54424   CGAAATGGGTTGTAG               AACGC TGAA GCGTA                TTTGGCGGAATAGGC  48 337
LPH40_RS10580 2556390 .. 2556406 +    -5    -3.767   GTTTTGATGGAGACT              GCCCCG TGTGT CGTGGC              TTTGGTGGATGCGTG  57 89
        pcaD 2557559 .. 2557573 +  -4.2  -3.68244   GCACGGGTACCGCGA               TCGAAC GCA GTCCGA               TTTCCCATTCCTGAT  55 255
LPH40_RS10605 2562775 .. 2562788 +  -4.5  -2.92789   GGCCGCGTGGTGAGT               CCGCA GCGA TGTGG                TGTGGTATTGCGTGT  49 28
LPH40_RS10610 2563945 .. 2563972 +   -10   -3.1585   TAGCCCCACAGGTAT        TTTCGGACATTT CAGA AAATGACCGAAA         TGTTCAGTTGGATCA  70 445
LPH40_RS10635 2569037 .. 2569053 +  -5.1  -3.48027   GAATGTGTAGGTGCA              CTGGCTG TAC TAGTCAG              ATTTTCTTCCTTATG  56 126
       folE2 NONE
LPH40_RS10645 2570680 .. 2570693 +  -4.5  -2.71791   AAATGCAAAAATTTC               TACCG TAGG CGGTG                CTTTGGGGAACAACT  46 88
LPH40_RS10660 NONE
LPH40_RS10665 NONE
LPH40_RS10670 2583533 .. 2583545 +  -6.9  -3.41839   AACGCTGTACGGGTT                CCTGC AAA GCGGG                TTCTGGATGTATCTG  59 427
LPH40_RS10680 2585366 .. 2585399 +  -5.3  -3.38046   GACTGAAGACAAGGC     TGTTTCCCAATAG-GC TGG GCTCTGTTGGGGACCG     TATTTAAAATGACAC  54 192
LPH40_RS10700 2590829 .. 2590843 +  -4.2  -3.62224   CATCAGGCAGTGCAG               CTCTTC AAC GATGAG               TTGTTGCCCAACTGT  55 412
LPH40_RS10705 NONE
LPH40_RS10710 2592299 .. 2592318 +  -7.2  -4.26076   GGAGAGGATGAGTTT            CATCGAGCA CAT TGC-CGATG            TTTTCATGGAGATGA  73 500
LPH40_RS10715 2594559 .. 2594582 +  -5.3  -2.93901   ATCTCTTGCGTCTGT          CGTTGCAGT CGGCGC ACTGCGATG           TATCCTTGGTGGAGT  51 377
LPH40_RS10720 2595627 .. 2595643 +  -2.9  -2.72881   ATCGGTAGTGGGAAC              TTGCCTA GCA TGGGCAC              CTGTTTGCTTGGATC  41 500
LPH40_RS10755 NONE
LPH40_RS10760 2601222 .. 2601242 + -11.1  -2.59683   GATGTCCTCGTTAGC            GTCACCGCC TCC GGCGCTGAC            CTTGTGCAATCCAGT  67 288
LPH40_RS10770 2602429 .. 2602439 +  -3.2  -3.73107   TGGTGCAGATGTATT                 GCAT GGC GTGC                 TTTAACCTTTGATAG  53 267
LPH40_RS10780 2604895 .. 2604908 +  -4.5  -4.54205   AGCGATTTTGAGGAG               TGTCG CTGA CGGCA                TTTCTTTCGTCTGAT  71 82
LPH40_RS10785 2607504 .. 2607520 + -10.9  -2.90496   CACAGCATGGGGCAT              CGCTTTC AGA GAAAGCG              TGATTTGAGAACCCA  74 162
        sufT 2608714 .. 2608729 +  -2.6  -2.63476   GCGTTAATGCGTTCC              CCT-TTG CTT CAACAGG              AATTTTTGCGTGCCT  41 59
LPH40_RS10800 2609980 .. 2609995 +    -9   -2.8371   AATCGCACGCTGATC              CCTGCT GTTA AGCAGG               CTTTGGGTGGTTGTT  60 178
LPH40_RS10830 2613392 .. 2613403 +  -4.4  -4.67608   TCCAAATACCACTGA                TCGT ATCT ACGA                 TTTTCTATTGCCATA  71 189
LPH40_RS10835 2614711 .. 2614725 +  -5.6  -2.94416   GGCGTTGCGTGAGGT               GAGCGC GCA GCGGTC               TCTATAATGCCGGTG  51 4
LPH40_RS10840 NONE
LPH40_RS10845 2616803 .. 2616813 +  -6.8  -3.60151   TGCGGTCAATGCGCA                 GCCA CAG TGGC                 TTGTACTTTGGCAGA  61 162
LPH40_RS10860 2622042 .. 2622054 + -10.5  -3.70863   TGAGCCAGTTTGCAG                GGCCC TTC GGGCC                TTTGCATCCTGTCTG  79 140
LPH40_RS10865 2623938 .. 2623977 +   -21  -3.54984   CTAGTCTCTAAAGCT  TAAGAGTCGTCACCTGTA TATA TACAGGTGACGACTCTGA   TTGGTATTTCTTGCT 100 518
LPH40_RS10905 NONE
LPH40_RS10910 2629837 .. 2629860 +  -8.2  -2.71712   GCGGTTCTGGATTCC          GAATCAGCAA TGTC TTGCCGATTC           CTTTCCACCACCCCG  56 241
LPH40_RS10920 NONE
LPH40_RS10925 NONE
LPH40_RS10930 2632895 .. 2632907 +  -3.3  -2.71712   AATAGCTGGGCGTAA                TCCCT ATC AGGGC                CTTTGCAACACCGAA  42 26
LPH40_RS10935 2633171 .. 2633183 +  -4.1  -3.40611   GCCCTAATTTTGCGG                CCTTG GAC TAAGG                TGTTGTTACGATGCG  50 15
LPH40_RS10940 2634415 .. 2634445 +  -7.5  -3.37622   TAGCCACGGTCACGG       CGCGGCTTTGCCA AGTTG TAGCAAGGACGCG       TTATCGATACGTATT  62 185
LPH40_RS10950 NONE
        rnhA NONE
        dnaQ 2637173 .. 2637189 +    -8  -2.75712   TGATTGGAGATATGA              CTTGGC CATTA GCCAAG              TACTTCCATGAGTGA  59 68
LPH40_RS10970 2638323 .. 2638338 +  -3.2  -3.06671   GTATATCGCTTACAG              TAGGCA ACGG TGCCGA               TATTAGCGTGGCTCT  45 238
LPH40_RS10975 2640627 .. 2640637 +  -5.4  -2.75498   GTAGTGGTGCCTGAG                 TCTG CGC CAGA                 ATTGTGTCTGCGGTC  47 402
LPH40_RS10985 2642149 .. 2642172 +  -3.8  -5.12068   TAGTGCTTACTGATA          GCTACCTTCA AGCA TGAAGGTCCC           TTTTTATTCAATCTG  77 83
        mdoH 2644559 .. 2644573 +    -5  -2.83082   CTTCGCCGCGTTAGG               CAAGCA TAA TGTTTG               GTTCTCTCTGTTTGG  47 17
LPH40_RS10995 2645286 .. 2645296 +  -5.4  -3.03007   AGCTGCTCCTGTGCC                 GCAA TCA TTGC                 TGTTGCGCCCGTCTT  51 40
LPH40_RS11000 NONE
LPH40_RS11005 NONE
        hemC 2648243 .. 2648259 +  -2.3  -4.21194   CTTCGACTAGCAAAT              TATTGAT TAG ATCAGTG              TTTTCGCTGATGCGG  60 248
LPH40_RS11040 NONE
LPH40_RS11045 2657786 .. 2657822 +  -3.8  -4.07687   ACGGTGACGTGAGAT    GTGATTTTCCAAAGGT CTCTT ACCATTCGAAAATGAC    TTTTGCGGAAAACGT  60 478
LPH40_RS11065 NONE
LPH40_RS11070 2664525 .. 2664562 +  -2.1  -4.19704   TTGCTTCTTCATATG   TGATTGTTGGTCGATCTA AGT TGGATTGATCGACGG-CA   TTTTAAGTCGGGTTA  57 363
LPH40_RS11080 2669149 .. 2669167 +  -2.4  -3.80862   GTGCATCTTGCTATT             CAAGATGA AAG TCAATTTG             TTTAGTAGTAGCTTT  52 326
LPH40_RS11085 2669522 .. 2669541 +  -7.2  -3.44274   CTTGTTCGTAGCGTA            CGTACGGTA CCG TACCGT-CG            TTACTGTTCTCATTG  62 238
        mtgA 2672438 .. 2672454 +  -6.6  -3.20349   TGGAGGTGCTTTGAT              CAACGA GTAAA TCGTTG              TATTGGCTTTGCCAG  57 282
        mutS 2675992 .. 2676022 +    -9  -4.56702   ACAGTGCATGCACGA       AACGGATAACCTCT TCG GGAGGTAATCCGTA       TTTGTTTGCTTCGCC  83 383
LPH40_RS11115 NONE
LPH40_RS11120 2677758 .. 2677781 +    -6  -2.77701   ATAGCTGCGTTCCAT          CAGTCTGCACA AAT TGAGC-GACTG          TGATCTTCATAAGCT  52 341
        birA NONE
LPH40_RS11130 2679805 .. 2679818 +  -3.1  -3.63336   AGCGATCTGGGCGGC               CGTTG CGGC TAACG                TTTAGAATCGTCTCT  51 7
LPH40_RS11135 2680464 .. 2680476 +  -6.3   -2.6989   ACGTTACGCTAGAAG                CGTAT CGC ATACG                TCCGTTTGGTACTTT  53 29
LPH40_RS11140 2680782 .. 2680801 +   -10  -3.04144   GGTTCTGTGGAGGTT            CCACGAGG GGCA CTTCGTGG             TCTTAGCGCTCGCGC  69 114
LPH40_RS11145 NONE
LPH40_RS11150 NONE
LPH40_RS11155 2682978 .. 2682988 +  -5.4  -4.27467   TAAGAATGATCCAGC                 TAGC GTC GCTA                 TTTCTGTTGGTATTC  66 69
LPH40_RS11160 2683809 .. 2683827 +  -3.8  -3.61398   GAACACGGATCAGCG             GAGGGTAT AAC AAACTCTC             TTGTTACCACAGCCA  52 56
LPH40_RS11180 2685830 .. 2685843 +  -9.5  -5.79595   TATTGAAAGCACAGA               CCGCC TTTG GGCGG                TTTTTTGTTTTGAGG 100 223
LPH40_RS11185 2686339 .. 2686351 +  -9.1  -3.54459   GGCATGTAGGGATAA                GGCCA CAC TGGCC                TTTGGAAGCCATTCA  71 48
LPH40_RS11200 NONE
LPH40_RS11205 NONE
LPH40_RS11210 NONE
LPH40_RS11215 2689708 .. 2689750 +  -2.8  -4.61566   GAGTGACTTTAAAAT GCCACGTGTTGCCGTCA CCATCTTCAA TGATGGC-ATGTGTGGC TTTTATCCTTTCCCC  65 203
LPH40_RS11235 2691495 .. 2691510 +  -7.6  -3.21416   TGCAGGACATTAATT              GAGCAT TGAC ATGCTC               TTGATAATACGAGTG  62 17
LPH40_RS11240 2691937 .. 2691947 +  -5.4  -2.73085   GCGGGAGGCTATGTG                 TCTG TCT CAGA                 ATATTCTTTCCACTG  48 246
LPH40_RS11245 NONE
LPH40_RS11250 NONE
LPH40_RS11255 NONE
LPH40_RS11260 2694099 .. 2694124 + -12.6  -2.71924   TCTCTTTCATGTGGA         CGGGGTGTCT TTGTAC AGGCACCCCG          ATTTAAGGAGGCATG  81 54
LPH40_RS11265 NONE
LPH40_RS11270 NONE
LPH40_RS11275 2697085 .. 2697132 +  -2.6  -4.13973   CAGGGCACGGTCAGG GGGTGTTGCCTTGACTGCTCAT GATG GTGAGTGGTCATGGTAGCCTGC TTCTTTCTGATGTCT  59 12
LPH40_RS11290 2699066 .. 2699085 +  -2.8  -3.51411   TAGGCTAGGTGTCCA            GCGCGTGAT GTT GTCGCG-GC            TTCGTTTACGGCGGT  48 203
LPH40_RS11335 NONE
LPH40_RS11340 2706352 .. 2706379 + -14.4   -3.0127   CCTCCATAGTGCGTA        TACTGACAAAGT ATAT ACTTTGTCAGTA         TGTATGGTTCGATAG  90 469
LPH40_RS11350 NONE
LPH40_RS11355 2708004 .. 2708020 +  -4.3  -3.71552   ATCACCTCGCGTCGT              CAGCTCC TTT GGTGTTG              TTCTCTTGCTGAACT  55 377
LPH40_RS11370 NONE
LPH40_RS11375 2715232 .. 2715246 +  -2.1  -4.56775   GGATAAAGCGTTGGA               CTTGG TACAC CTAAG               TTTTTAGCGACCGGT  63 112
LPH40_RS11395 2718962 .. 2718995 +  -5.3  -3.28261   GTTGCCGGACCTGTG     GCAGGGCGAG-TGAAC CTG GTTTGGCTTCCCCTGC     TTGCTATCGAGTTAT  54 13
LPH40_RS11400 NONE
        secB NONE
LPH40_RS11410 2721259 .. 2721285 +  -7.3  -3.16191   GCCTAAATAAAAAAA        GAAG-CCCGATC CTTG GATCGGGGCCTC         TTCCTCAAAATGTGG  60 90
LPH40_RS11420 2723262 .. 2723283 +  -6.5   -3.5002   CCTGCTGAGAAGCGG           TGTAGGCCG CTTG CCGCCTGCA            TTCGTTGTACTTCAC  61 403
        dnaX NONE
LPH40_RS11440 2728250 .. 2728261 +    -3  -3.90856   GTATCGTAGACACGT                TATG CATA CATA                 TTTGCTTGAGCAATT  54 210
        recR 2728894 .. 2728906 +  -3.3   -4.0827   CTGACCCGCTAAGCT                TGGTG TAT CCCCA                TTTCTGTGAGTGTGT  58 72
LPH40_RS11450 2729285 .. 2729311 +  -9.5  -2.54896   GCTATTTGAAATATG        CGCCGCCGCTTGA CGG TCA-GCGGCG-CG        TGCCTTACCTACAGA  66 42
LPH40_RS11475 2736022 .. 2736050 +  -3.9  -3.05647   TATCAATGGCTAGCG        CCAGGATTGTT CTGATTT GACAATACTGG        TCTCTATCCTTAGGA  47 479
LPH40_RS11480 NONE
        rpmF 2736932 .. 2736953 +  -9.4  -5.22039   GCATGTGCTTTGGAA           GTCGCGTC TGTCCC GACGCGGC            TTTTTTAAATTTAGG 100 78
LPH40_RS11490 2738216 .. 2738228 +  -6.3  -2.72829   TGTTGTTGCGTAATG                CAACA CGT TGTTG                ATTTACCAACGTGTC  53 290
LPH40_RS11575 2763104 .. 2763145 +  -2.2  -2.73994   CTCGACTGGTGAGGT TGTGTTCGGAAACGGCGGC ATGAA GGCGTTG-TTCCGAGCCCG TCGTATTGGCAAGGT  39 3
        ubiB 2764999 .. 2765027 +  -5.3  -2.53903   TCATCCCTGTAACCC        TGGCAAAGAAATC GTA GATTCCTTGGTCA        CTCATTTTTCGCGCA  46 243
LPH40_RS11610 2771160 .. 2771173 +  -4.5  -2.98356   TTAGTTGATCTAGTT               GTGCT TTCA GGCAC                TATCTCAATTTACAT  49 42
LPH40_RS11615 2772346 .. 2772364 +  -3.7  -3.71527   CTTCCAACCAGTTTT             CGTGGCG TATCT CACCGCG             TTTGAATAATTCCAG  55 452
        glnA 2774593 .. 2774623 + -11.9  -3.78026   GCAATTCCAGTGGCA       GCGATGGTGGGTA CTTCC TTTCCACCATCGC       TATTTTCCATTTCAC  85 41
LPH40_RS11630 NONE
         amt 2776661 .. 2776675 +  -6.4  -3.14344   GTCAGCGTATGACTC               CTGAGC GTG GTTCAG               TTCATAGACCCGATA  57 22
LPH40_RS11645 NONE
LPH40_RS11670 2784596 .. 2784620 +  -5.8   -2.8055   TTCCGTCTTCCGGAA         CCCA-GTTCAT TTGT ATGAGCCTGGG          TCATATTCTGGAATG  52 8
LPH40_RS11675 2785742 .. 2785769 +  -7.2  -4.32857   CATTAAACCGGTTAT        TCATCATTC-ATG AAT CATTGAGTGATGA        TTTATATTTCAGAAG  76 35
LPH40_RS11695 NONE
LPH40_RS11700 2787467 .. 2787477 +  -3.2  -4.01646   GAGGAATCTCTTTCC                 GTAG CGG CTGC                 TTAGTTTTTTATATG  58 11
LPH40_RS11705 NONE
LPH40_RS11710 2788121 .. 2788165 +  -2.5  -2.87581   CCACTGTCAATGAGA TGTGCACACGGTGCCGTAGGC AAT GTCCACGGATACGTGAGCCCG TGATCTTTCCGTTGA  40 153
LPH40_RS11715 2788846 .. 2788886 +  -3.9  -2.52464   CTGTGGGTACTCAAG  CGGTTCTTCCTTGTCTCCT GCT GGGGGGTAAGGGGGGATCA  TAGCTTGACCCCACA  44 94
LPH40_RS11720 2789368 .. 2789384 +  -4.3  -3.26545   TCTAAGGTGGCGTAG              TGATGCC TGT GGCAACG              TTGCTGGTGTCTGCG  48 26
LPH40_RS11725 NONE
LPH40_RS11730 2789846 .. 2789868 +  -9.1  -5.03314   TATTTTGATGTGTTT           GGGGTGTCT TGGTC GGGCACCCC           TTTTTTCGAGGTGGG 100 50
LPH40_RS11735 NONE
LPH40_RS11740 2791739 .. 2791750 +  -3.6  -3.08015   GGTTTCTTGACAGGG                GGCG TGTA TGCC                 TATTCACGTGATTAC  45 31
LPH40_RS11745 2792901 .. 2792921 +  -2.5  -3.43773   AGAATTTGATGATAG            TCGCAGC GACCGCA GCTCCGA            TATTTACATATACAA  45 53
LPH40_RS11750 NONE
LPH40_RS11755 2794051 .. 2794081 + -13.4   -3.6106   TCTTCGATGACTACA       GCCATGCTAGCG ATGCTGG CGTTAGCATGGC       TTTGAGGGTGTTAAG  84 428
        ftsY 2798280 .. 2798304 +  -2.1  -3.67597   CTACTGCCAAAAACG          TTAGGGAGT GCTTAAG GCTCCCCAA          TTCTTACCTACGCCA  50 11
        mutY NONE
LPH40_RS11790 2799777 .. 2799795 +  -3.3  -3.92641   ACGTATACAGTGTTT             TTAATAA CCAGT TTATTAA             TTTATGCATCACATT  55 60
LPH40_RS11795 2800986 .. 2800998 +  -7.7  -4.14472   ACTCCTGGCCTTACA                GCACA TCC TGTGC                TTTTCCAGGTGTTAG  75 493
LPH40_RS11800 NONE
        ruvC 2803831 .. 2803846 +  -3.3  -2.93901   CAGCATACGGCTTTC              CGTAA AGAGCA TTACG               TATGATTGGTCGCCT  45 97
        ruvA NONE
LPH40_RS11815 2806420 .. 2806430 +  -3.2  -2.88579   AGCTACGGTTCGCCA                 CGTG GCA CATG                 TATCTCAAGAGTTAC  43 52
        ruvB 2807517 .. 2807527 +  -3.2  -4.15565   CGGCTCTTAATGATC                 CAGG AGA CTTG                 TTTTGAAGTACTACC  60 9
        ybgC NONE
        tolQ NONE
LPH40_RS11835 NONE
        tolA 2810649 .. 2810661 +  -2.7  -3.87869   GTTACATTCACGCTG                TTGTT GTT AACGA                TTTCTAAAACATTCA  54 401
        tolB 2812111 .. 2812121 +  -5.4  -2.83119   CATTGGCGAGGGAGC                 TACC ATA GGTA                 TCGTTATGAACAATT  49 72
         pal NONE
        ybgF NONE
        queE 2814406 .. 2814417 +  -5.8  -3.12668   CAAATAGGAGTGGGA                TCCC AGTA GGGA                 TATTGACCTTTAGGA  52 215
         nfi 2815945 .. 2815975 + -12.7  -2.62396   GTAAAGACGCTGGTA       CTCACACCTGCAA AATAA TTGCAGATGTGAG       TACTCTGCGAAGCTA  81 116
LPH40_RS11880 2818984 .. 2819005 +  -2.9  -3.27298   GATGACTTTGTCAAA           GCGCTCATA GGTC TCTGGGTGC            TTGATGATTGACAGC  46 404
LPH40_RS11895 2823846 .. 2823856 +    -4  -4.59773   TGCTGCAAGCAAAAA                 TACA TCC TGTA                 TTTTTCCAGCTGCCG  68 64
LPH40_RS11900 NONE
        thiC 2819472 .. 2819509 - -14.3  -2.56571   CATACATGCAAGTGA   CTGACACAGGAACAAAC AAGT GTTCGTTCCAATGTCAG    AGAAAAGGGAGTACT  87 39
LPH40_RS11885 2818518 .. 2818535 -  -5.5  -3.06796   TCTGATCGGACGCAA             CGGCCAA CCCA TTGCCCG              CTATTCGCCAACCAA  50 99
LPH40_RS11875 2815937 .. 2815984 - -18.7  -3.36515   TGTGATTTGTAAAGA CGCTG-GTACTCACACCTGCAA AATAA TTGCAGATGTGAGTACTCTGCG AAGCTAAGATAGTTG 100 58
        gpmA 2813933 .. 2813947 -  -3.4  -4.35116   TAGTTGACATTAAAA               CCCCTG GAT CTGGAG               AAGTGCACCGCAACT  61 365
LPH40_RS11775 NONE
LPH40_RS11770 2794605 .. 2794615 -  -2.4  -3.13728   ATCATCGATACTGAA                 CGTG GCA CTCG                 TATGGCAGTAGATAT  43 285
LPH40_RS11765 NONE
LPH40_RS11760 NONE
LPH40_RS11690 2786434 .. 2786464 - -11.2  -2.82516   TCTTCGATGACTACA       GCCATGCTAGCG ATGCTGG CGTTAGCATGGC       TTTAACGTTATTCAG  74 58
LPH40_RS11685 NONE
LPH40_RS11680 2785569 .. 2785582 -  -3.1  -3.01712   GTCGTTGTTTCAATA               CCGAT GGTT ATCAG                ATTGATATGAGTGCG  42 221
LPH40_RS11665 2782286 .. 2782322 - -14.6  -3.66424   TAAAATCAGGTTAAA   CACCGACGCAGCCGATA ACAT TATCGACCGCGT-GGTG    ATTGTATAGCTGATT  95 103
        nadA NONE
LPH40_RS11655 2779163 .. 2779181 -  -3.1   -2.9732   GTGGAAGGGAAACGA             GGTTCAT GTCAG AAGAACC             TTATCTTTTGAAACA  43 10
        nadC 2778127 .. 2778144 -  -3.3  -3.54424   GCTGATGGGTTTAAA             CGCACGC GATG GCCTACG              TATGACAGGCCGCCT  50 181
LPH40_RS11620 2772080 .. 2772138 -  -2.6  -3.90729   AAGAAGGGGTAGAAA CTCCAGTCACATTGGCGCCT-TCCGGTCT AGGA AACCCGGTCAGGCGCCAAT-CAA-TGAAG TTAATGCGCCAGTAC  54 75
LPH40_RS11605 NONE
LPH40_RS11600 2768596 .. 2768606 -    -4   -2.7185   AGGAGGCGTGAATGA                 TTCA TGG TGAA                 GCTCCCATTCTTGCA  44 16
LPH40_RS11595 2767811 .. 2767825 -  -6.4  -3.38768   TCATATCATCCAGAA               CCTAGC TAA GCTAGA               GGCAGGGATTGCCGT  59 246
LPH40_RS11590 2765729 .. 2765743 -  -4.3  -3.40403   CTTGGCGGATTACAA               TTCGA TCACG TCGAA               AGCAACTTCCGGATT  50 5
LPH40_RS11585 NONE
        purU 2760635 .. 2760647 -  -3.3  -2.97475   GTTTTCATCAGAAAT                GCCCC TAG GAGAC                GGACGGCGGAATATC  45 85
LPH40_RS11565 2760024 .. 2760042 -  -7.4  -2.74192   CACTTTTCAACACGA             TCATCGGC ACG GCCCATGA             GGACGATTCGGTGGC  56 209
LPH40_RS11560 2758372 .. 2758395 -  -7.5  -2.62184   CTCGGCCTCAGATTA          GCGATTG-CG ACACG CGACAATCGC          TTTAGGGATGCACCA  56 58
LPH40_RS11555 NONE
        zapE 2755893 .. 2755908 -  -2.5  -3.30507   AGGAACTGAAACACA              GTACC CACTTT GGCAC               ATTACTGAAAGGAAC  45 327
LPH40_RS11545 2755106 .. 2755123 -  -9.1  -2.88579   CTAACCTGCGATATA             CCAGCAC CATT GCGCTGG              TGTCTGGATTGAACT  65 179
LPH40_RS11540 NONE
LPH40_RS11535 2750432 .. 2750457 -  -9.8  -3.14132   CCTGGTTTCGACGAA         CATCGGCATC TTTAGG GATACCGATG          CTGGATGGCCGGTTG  70 290
        ilvC NONE
        ilvG NONE
LPH40_RS11520 2746488 .. 2746504 -  -4.4  -2.88887   TGCAAAGAAAATCTA             GCG-GCA GTAT TGCGCGC              GGTATAGCACTTAGT  45 51
LPH40_RS11515 NONE
LPH40_RS11510 2743305 .. 2743317 -  -5.5  -3.16742   TGCAATGTTTAGCAA                TCCCG AAT CAGGA                CAGCTTCGCTAAACT  52 454
LPH40_RS11505 2740377 .. 2740400 -  -9.5   -4.3129   CAGGGATTACGAAAA          GCGGGGCCT TGGTTT AGGCCCCTC           CCACAAACGTCGCAT  85 113
LPH40_RS11500 2739388 .. 2739404 -  -7.9  -2.78384   CGCGTTCGGACGACA              GGCCACT CAA AGAGGCC              ATAATGGAAGTGGTT  59 108
LPH40_RS11495 2738202 .. 2738221 -  -2.9  -2.82595   GGTAATCACTTAAAT            GTTGTTGC GTAAT GCAACA-C            GTTGTTGATTTACCA  42 0
LPH40_RS11470 NONE
LPH40_RS11465 NONE
LPH40_RS11460 NONE
LPH40_RS11455 2729284 .. 2729310 - -10.1  -2.62613   TGCTATTTGAAATAT         GCGCCGCCG CTTGACGGT CAGCGGCGC         GTGCCTTACCTACAG  69 52
LPH40_RS11430 2725565 .. 2725584 - -10.7  -5.25699   ATTAGATAATAAAAA            GGCCACC TCGACG GGTGGCC             TTCTTGCAACATGTT 100 48
LPH40_RS11425 2724586 .. 2724596 -    -4  -3.39449   TCGCAGCAAGACGAA                 CTTT CGG AAAG                 GGGGGGGCGCTGGAA  50 405
LPH40_RS11415 2721259 .. 2721285 -  -9.5  -5.95539   GCCTAAATAAAAAAA        GAAG-CCCGATC CTTG GATCGGGGCCTC         TTCCTCAAAATGTGG 100 85
LPH40_RS11390 NONE
LPH40_RS11385 NONE
LPH40_RS11380 NONE
LPH40_RS11365 NONE
LPH40_RS11360 2708953 .. 2708965 -  -3.3  -3.62255   GGCAAGAAGAAGTAA                TGTCG AAT CGGCA                TAGATGCGTTTCAGG  53 404
LPH40_RS11345 2705776 .. 2705793 -  -2.7  -3.66095   AAAGGCGCAGCTAAA             CGGTA CGCACCTT TACCG              CACGCTGTCTGCTAA  50 283
LPH40_RS11330 NONE
LPH40_RS11325 NONE
LPH40_RS11320 NONE
LPH40_RS11315 2700478 .. 2700505 -  -5.4  -5.40072   CCCCCCTGAAAAAAA        TCTCCGCGCCGC TCCG ACAGCGCCGTGA         CACTTGAAAATCATC  87 39
LPH40_RS11310 NONE
LPH40_RS11305 NONE
LPH40_RS11300 NONE
LPH40_RS11295 2698438 .. 2698451 -  -2.3  -3.09933   GGCCAATGTACTCAA               GTTGC ATTG GCATC                AGGTAGATATTGTTC  42 475
LPH40_RS11285 NONE
LPH40_RS11280 2696850 .. 2696861 -  -5.8  -2.70932   TCTGGCGGTGAAGGA                CTGG ATGC CCAG                 GGGGTGTTTAAGGGG  48 267
LPH40_RS11230 2690651 .. 2690661 -    -4  -4.17048   GCCTCCTGAAAATAA                 TTAG CTG CTAA                 ACGCTTATTTTTCCT  62 22
LPH40_RS11225 NONE
LPH40_RS11220 2689818 .. 2689832 -  -4.3  -3.60475   AATAAACGGTCCAAA               TTTCG GCGCA CGAAA               CTGTTTTCTTCTACG  52 75
LPH40_RS11195 NONE
LPH40_RS11190 2686138 .. 2686153 - -11.8  -2.62616   CGATGCCGGACATGA              GCGGCG ATGC CGCCGC               CGCCGGGGCCAAAGG  70 236
LPH40_RS11110 2675596 .. 2675608 -  -5.5  -4.19746   TTGACGCCAAAACAA                GCACT GGA AGCGC                TTTACCGGCTCAAAG  67 98
LPH40_RS11095 2670445 .. 2670457 -  -4.9  -3.39288   GATTGTTTAACAAGA                TGAAA TCC TTTCA                GATAGTGATAATCAT  52 40
LPH40_RS11090 2669293 .. 2669303 -  -2.4  -3.53012   GGTTGTGGGTTCAAA                 TCCC GCC GGGG                 CCACCAAACTTTTAG  47 221
        mprF 2665120 .. 2665143 -  -3.2  -2.83271   TCAGGGCGATAATGA          CTTTTCATAA ATCT CTAGGAAAAG           GTTTGTTATCCTCTA  43 175
LPH40_RS11060 NONE
LPH40_RS11055 NONE
LPH40_RS11050 2657497 .. 2657521 -  -5.7  -2.79915   ACTTACCGCACCACA          TCATCAATCCA TCC TGGATTGGGGA          GCTTGACCTTCAATT  52 169
LPH40_RS11035 2652249 .. 2652263 -  -5.7  -2.78015   GTAAGGACGTGAAAT               CGATG GTCGT CATCG               GTATTGCTCCTTTGC  52 181
LPH40_RS11030 2650944 .. 2650961 -    -7  -2.51966   GCAAAGGTTAGCAAT             TGCCAC ATTGCG GTGGCA              GTTGCTCCGGAATGC  56 195
LPH40_RS11020 2649007 .. 2649018 -  -4.4  -2.82742   AGGTTTCGAGAACTA                GGTT GGAA AACC                 TTTAGAGCGTATGTT  45 51
LPH40_RS11015 NONE
LPH40_RS10980 2640215 .. 2640225 -  -5.4  -5.07486   TATGTTGAAGAAAAA                 TCCT ATC AGGA                 TTACCGCTCAGTCGA  82 68
LPH40_RS10965 2637173 .. 2637189 -  -8.7  -2.69799   TGATTGGAGATATGA              CTTGGCC ATT AGCCAAG              TACTTCCATGAGTGA  61 17
        gloB 2634178 .. 2634198 -  -3.9  -3.75169   GAGCATGCCAGCAAA            CTGTTAGGT CAC ACCGAGCAG            GACATCACCGAGAGG  55 349
LPH40_RS10915 2629220 .. 2629275 -  -7.4  -3.12402   GAAATCATCACCGAA GCGGCAACCCACAGCGCCTTCA-ATGC CGG GCACCTGGCGGCGCTGATGACCACCGC GCCCGCCTGGGCCGC  60 373
LPH40_RS10900 2627419 .. 2627429 -  -3.2  -2.80472   TGGTACTAAAAAATG                 GTAC CTA GCAC                 GAGAGTTCACTGGGA  43 93
LPH40_RS10895 NONE
LPH40_RS10890 2626614 .. 2626633 - -11.4   -5.7946   TGCTCAATAAAAAAA            GCCCTGCG GGTG CACAGGGC             TTGGAGGGAAATCGC 100 201
LPH40_RS10885 NONE
LPH40_RS10880 NONE
LPH40_RS10875 NONE
LPH40_RS10870 2623943 .. 2623972 - -19.5  -3.12668   CTCTAAAGCTTAAGA       GTCGTCACCTGTA TATA TACAGGTGACGAC        TCTGATTGGTATTTC 100 0
LPH40_RS10855 NONE
        ribA 2617088 .. 2617102 -  -3.4  -3.14564   TCACTGGGTCAGCAA               CTCCAG TGT CCGGTG               ATCAGGATGTGGTCA  46 438
LPH40_RS10825 NONE
LPH40_RS10820 NONE
         fis NONE
LPH40_RS10810 2610316 .. 2610331 -  -5.4  -3.55761   TACGCATGGTCCAAA              CTCACA GGCA CGTGAG               GCGAACCCGGGATTG  56 113
LPH40_RS10805 2609762 .. 2609792 -    -6  -3.33696   TCGTTGCGTAAGGAA       CTGACCGACATCCA ATA CGGCCGTCTGCCAG       ATCGCTATGGGTGGA  54 171
LPH40_RS10790 NONE
LPH40_RS10775 2602373 .. 2602389 -  -2.2  -2.62184   TTGGTCTCGATACCA              CGGTAA TCGGC TTGCCG              GACGGTACCAGATAA  39 332
LPH40_RS10765 2601016 .. 2601027 -  -2.2  -3.02511   CTGAGCTTCGCAATA                GCTCG ACT CG-GC                TTGCTGGTCCTGCTT  42 67
LPH40_RS10750 NONE
LPH40_RS10745 2598408 .. 2598425 -  -5.5  -3.19026   GACGTTAACAGTCAA             TGCGCTG TATT CATCGCA              TTCTCCAGACGCCGT  52 4
        ssrS 2597994 .. 2598007 -  -2.3   -3.7948   GGAAGATGCATCAAA               CACCC CAGC GTGTG                GTTTATGTGGCTTGC  52 136
LPH40_RS10735 NONE
LPH40_RS10730 2596035 .. 2596048 -  -6.7  -4.10657   GGAGAGGTGGGAAAA               CTGAC AGGC GTCAG                CTGACGGTTGAGTTC  68 39
        rpiA NONE
        sbcB NONE
LPH40_RS10690 2587430 .. 2587441 -  -5.8  -3.21099   GTGCTTGAGGATCAA                CACC CGGT GGTG                 CTCCTAGCGTTCTGT  55 377
LPH40_RS10685 2586026 .. 2586039 -  -3.1  -3.88291   GACCACGCCTATAAA               GC-CAC CAG GTGCGC               TGCTGGGCGTTTGAC  54 280
LPH40_RS10675 2583520 .. 2583543 -  -3.8  -3.11634   TTCTATAGCAGTGAA          CGCTGTAC-GG GTT CCTGCAAAGCG          GGTTCTGGATGTATC  48 73
LPH40_RS10655 NONE
LPH40_RS10650 2570760 .. 2570789 - -20.1  -2.53263   TTTATCCTGAAGGCA       CGAAGCCCCGGTC TTAT GACCGAGGCTTCG        GAGGCCTGTCCAGGC 100 49
LPH40_RS10630 2567695 .. 2567711 -  -5.1  -3.61506   TCATTTTCAAAAAAT              TCACCGT TTT ATGGTGA              CAGCAATGATTTTTC  56 82
        bioC NONE
        lpxO NONE
        mnmG 2559303 .. 2559313 -  -2.4  -2.71731   GTCACTGTTCAATGA                 GGTG AAA CTCC                 AGCGCGGCGCATTAA  39 148
LPH40_RS10595 2558648 .. 2558661 -  -6.7  -3.55444   GCTTCAGCGGTGAAA               TCAGC TCAT GCTGA                GGTGAGCTTGGCCAA  61 64
        hemB 2554044 .. 2554064 -  -4.8  -3.20382   CGTGATATCGATTAA           CCAGTTGAT TACT ATCA-CTGG            AGTGGATCCATTCCC  50 100
        hemL 2550951 .. 2550961 -  -3.2  -3.67188   ACTGAGCTGAAAACA                 GCAA TGT CTGC                 AACAGTCGCACTTTG  53 121
        kdsB NONE
LPH40_RS10550 2547763 .. 2547786 -    -6  -3.80573   TGGATGATCAGCAAA          GCGACTCA AACACGCG TGAGCCGC           ACCAAGCTGGCCTGT  64 7
        uvrC NONE
        pgsA NONE
LPH40_RS10535 2544240 .. 2544257 -  -2.5  -2.82623   TCCGCTGCATAACCA             CTCTGCC ACCA GGCCGGG              AACAGGATTGTATAG  40 93
LPH40_RS10530 2544162 .. 2544185 -  -5.4  -5.20154   ATAGAACCTAAAAAA          CTCCAATA GCGGTCTG TATTGGAG           GCCTGGGTCGGAATC  85 20
LPH40_RS10510 2533561 .. 2533597 - -17.3  -3.14522   CGAATGCATACTCAA    TGTTCCTGGACCGATGC ATG GCACCGGTCCAGGGACT    GGATTCACCACTTGT 100 30
LPH40_RS10505 2530721 .. 2530741 -  -3.3  -4.26076   GTACTTTCATGAAAA            CTCCAATAG TGC CCATTAAAG            AGCCAGCAGATATCT  60 477
        pstS NONE
        pstC NONE
        pstA NONE
        pstB NONE
        phoU NONE
         rnt 2524911 .. 2524926 -  -3.2  -2.72558   AGAAGTGCCTAAGTA              CTCCTT GGAG ATGGAG               ATTGTTAGCTAGAAT  42 313
        rsmA NONE
        apaG NONE
LPH40_RS10460 2521634 .. 2521647 -  -3.1  -3.34716   GTACTTGTGAAAAAG               CAATG CAAC CATCG                TGATGCTCCAAACGG  47 330
LPH40_RS10455 2519326 .. 2519349 -  -5.4  -3.91897   CCGGCGAGCCAGAAA          TCGAGTGTCAT CGC ATGAC-CTCAA          ACGTTATCGCACAGG  61 118
        kdpF 2519254 .. 2519268 -  -5.6  -2.57132   TGTTCCTTTCAGAAG               CGTTCG GGG CGGACG               AGCACCGCCACGAGA  48 4
        kdpA NONE
        kdpB NONE
        kdpC NONE
LPH40_RS10430 NONE
LPH40_RS10425 2511438 .. 2511449 -  -5.8  -4.99134   ATGCCAAAGTAAAAA                GCAG AAAC CTGC                 TATGAATCTCCCCTA  81 100
LPH40_RS10420 NONE
LPH40_RS10415 2509935 .. 2509953 -  -3.8  -3.07994   GGCAATCGGAGCCAA             GCCAATCA AGG TGATGAGC             ATGACATCAAGCTTC  47 125
        recN 2495638 .. 2495651 -  -3.1  -3.03159   CGAACTGCTCGAACA               GTCCA GCAG TGAAC                ATCATCTCAGTGCTG  42 481
LPH40_RS10350 2494997 .. 2495020 - -13.8  -2.73681   GATTGATCCTAAGGA          GGCACGGCGC CGAC GCGCTGTGCC           GACGTAATACTTCTA  84 61
        smpB 2493249 .. 2493272 -  -5.3  -3.61715   CAGCGCTGTGAATAA          CCAACGTAC CTCAGC GTATGTTGG           TGCAGATGTTACCGT  56 525
LPH40_RS10295 NONE
LPH40_RS10225 NONE
LPH40_RS10220 2463165 .. 2463199 -  -9.8  -3.12803   TATCTATAGTTAAGA     CAGACGCAGGCTTCCC ATT GGCCTGCCAGCGTCTG     CATGATCCCTATTGA  70 190
LPH40_RS10205 2460088 .. 2460100 - -10.5  -3.15544   CGTCAGTTGGAGCAA                GCGCG TGA CGCGC                TGCAAGATAAATTAA  73 43
LPH40_RS10200 2456765 .. 2456799 -  -4.9  -2.66634   GAGTGGAGGACATGA    GC-CCGGCCTGCACAC ACGG ATGTACCGGCAGGTGC     CGGTGTGTGAATGGG  46 49
LPH40_RS10195 2453401 .. 2453433 -  -6.2  -3.30124   GGCGACCGTGCACAA     CGCTT-GGCTGCCGC TCGG GCGGCGGCTGAAGCA      GCGGTGGCTGCACAA  54 222
LPH40_RS10165 2448472 .. 2448497 -  -4.8  -3.63895   TGGAAGCATTCCAAA         GCTGATAAAT GGTTGA ATTTTTCAGC          TGGAATGAAGGCGCC  57 293
LPH40_RS10140 2443650 .. 2443675 -  -8.9  -4.17958   AAGATGTTTAATAAA         GGCGCATCGTG TATA CCCGATGCGTC          ACCGACATAGTACGT  80 511
LPH40_RS10135 2441996 .. 2442011 -    -6  -2.92091   ACACCTATTTACACA              CCCCCC TGTT GGGTGG               ACATGCCAGGGATTT  52 81
LPH40_RS10120 2439508 .. 2439534 -  -3.6  -3.45324   CATCTGTAGTAAACA         CAGCGGTACC TGCACAT GGTGCCGTTG         AAGCGCTATTACGAT  50 241
LPH40_RS10110 NONE
LPH40_RS10105 2433854 .. 2433868 -  -6.4  -3.80855   CTGTGGAAAAAGTAA               GGCAAT CGC ATCGCC               AAGGCTCACAACGTT  66 43
LPH40_RS10100 2433122 .. 2433136 -  -8.6  -3.73968   AAATCCTTGATGAAA               CCCAAT GGC ATTGGG               TTTTATTAAACATCT  71 412
LPH40_RS10095 2432367 .. 2432380 -  -2.3  -4.03413   ATCTTTTTATATAAA               GCGCA TAAC TGCTC                TTGGGTGCTAATACT  55 97
LPH40_RS10090 NONE
LPH40_RS10085 NONE
LPH40_RS10080 NONE
LPH40_RS10075 NONE
LPH40_RS10070 NONE
LPH40_RS10065 NONE
LPH40_RS10060 NONE
LPH40_RS10055 NONE
LPH40_RS10050 NONE
LPH40_RS10045 2420182 .. 2420205 - -19.6  -3.59698   CGAGCCCATATATAA          GAGGCCCCGC ATCT GCGGGGCCTC           CCAGTAACACAACAC 100 45
LPH40_RS10040 NONE
LPH40_RS10035 2415570 .. 2415590 -  -9.7  -3.28712   CCGGTGGTTGCAGAA            TGAATCGGC ATT GCCGATGCA            CCGGGCACCACCGAT  73 202
LPH40_RS10025 2414977 .. 2415002 -  -5.3  -3.03441   CAGTACTGGTGAATA         CGCTTGCACCG TGAT CGGCCCAAGTG          AACGCAATCACTGGC  51 161
LPH40_RS10000 2412338 .. 2412354 -    -3  -2.97475   TGCGTCATTAGAAAC             GCA-TGC ATGA GCAGTGC              CGCTGCGCTGGAGCG  43 451
LPH40_RS09990 2411382 .. 2411402 -  -2.4  -3.09878   GGCACGCACCCAACA            GGGATCGC TGCGC GCGAGCCG            CCATTCCAGCGCATC  43 509
LPH40_RS09985 NONE
LPH40_RS09980 2409346 .. 2409365 -  -7.9  -2.53581   TAGACGCTCAATGCA            TCGTGTC GCCGGT GACACGA             TGCATTGCCACGATT  57 443
        rpsT 2400901 .. 2400921 -  -3.2  -3.39556   AATGCCCGAAGAAGA           GGCTCACGC CGTT GCG-GAGGC            ACTGATTGCCGAACT  48 287
        uvrA 2395987 .. 2395997 -  -6.8  -3.53811   TGGATGCGGTCTAAA                 GGTG TAC CACC                 TGTGCGACCATGACA  61 10
LPH40_RS09905 2391953 .. 2391964 -  -7.2  -2.76263   GCCAGGACGGAACCA                GCGG GGTT CCGC                 CGCGCGGGCCGCCGT  57 59
LPH40_RS09900 NONE
LPH40_RS09895 NONE
LPH40_RS09890 NONE
LPH40_RS09885 2388754 .. 2388769 -  -6.1  -5.40072   CGGCCCTCAAAAAAA              CGAGG TTACAG CCTCG               CTGGAGGACACATTG  90 1
LPH40_RS09880 2387617 .. 2387635 -    -6  -3.65522   TACCTATCGGAACAA             CGTGCT GGAGCGA AGCACG             GCCAAGTCAAGCGCT  61 73
        ykgO 2372690 .. 2372703 -  -9.5  -5.98675   CAGAAAAACAAAAAA               CCGCC CTGA GGCGG                TTTTCCAGGACACAC 100 58
LPH40_RS09800 NONE
LPH40_RS09795 NONE
LPH40_RS09790 NONE
LPH40_RS09785 2368625 .. 2368641 -  -2.9  -2.70932   TCGCTGGTTCAACGA              TCCCTCT AAA AGAGGAT              CCACTGAAGTTTGTG  41 201
LPH40_RS09740 NONE
        scpB NONE
LPH40_RS09730 NONE
LPH40_RS12045 NONE
        ccmD 2350642 .. 2350659 -  -2.6  -3.49653   AGGATGGGGACATAA             CGCACC TGCAGG GGTGTG              TTGCCAGCGGTGACG  49 242
LPH40_RS09690 NONE
LPH40_RS09685 2347780 .. 2347791 -  -5.8  -3.44848   TGCTGTTATCAAAGA                CGCT CTGT AGCG                 GCGTTTACTTTAGGG  59 238
LPH40_RS09680 2345958 .. 2345969 -  -2.2  -3.57144   GCTGTCATTGCTAAA                CCTG CACG CAGA                 CAGCGGATGTTTGCC  47 308
        epmB 2340371 .. 2340390 -  -4.2  -2.52543   ACTCTGCGTAATCCA            GACGATGG ACAG CCAACATC             TGTGTGTCGAGTGGC  44 55
LPH40_RS09635 2338098 .. 2338130 -  -4.2  -4.19879   ATAAAACGCCCAAAA     GCACAGA-CCCTCAC GACT ATGAGAGATGTGTGC      CAGTCTAGCCGTATT  62 360
        bioD 2335978 .. 2335988 -  -5.4  -3.05384   CTCGTTGGCATCGAA                 GGTT CGG AACC                 CGTGTCCGGAGGATA  51 116
        aceE 2320571 .. 2320585 -  -3.4   -3.5393   AGGACCGTCTCGAAA               CCTCCG GGC CGGTGA               CCCGCACCGTGTATT  50 337
LPH40_RS09560 2318456 .. 2318468 -  -6.2  -2.62192   CCGTAGTCAAGGAAG                GGCC GTCCA GGCC                ATCGTGATCGCACTT  51 4
LPH40_RS09555 2317496 .. 2317506 -  -4.6  -4.51743   GCAGCAGGAAATAAA                 CCGC GTT GCAG                 CTCGTGCCCTGATCA  71 250
LPH40_RS09550 2316942 .. 2316979 - -26.5  -2.63301   GAGACGTGCAGACCA   CCAGGGAGTGACGTCAG CAAG CTGACGCCACTCCCTGG    CGACAAAGCTTGCGA 100 53
LPH40_RS09545 NONE
LPH40_RS09540 2315449 .. 2315465 -  -5.7  -3.02144   CGACGTCTTGGAATA              GCACGCC ACT GGCAAGC              CGCTTCTTGGCCGAC  53 460
LPH40_RS09530 NONE
         asd 2314190 .. 2314211 -  -4.3  -5.00616   GTCGCGTGGAAAAAA           GCTGGCCTG CTTT CATGGCAGC            GGCGGGTCACAACAC  74 96
LPH40_RS09520 NONE
LPH40_RS09515 2308854 .. 2308868 -  -4.3  -2.53581   TAGATTTTCAATGCA               TCATC TCAGT GATGA               GATACCGAGGATGGT  44 90
LPH40_RS09510 2307311 .. 2307322 -  -5.8  -3.76224   CTTCGATCCAGCAAA                GCTG ACAG CAGC                 TCGTTTTTGAATTGG  61 302
        bioF NONE
        bioH 2299775 .. 2299791 -  -3.6  -3.06679   AACATGGGTATTGAA              GGCTGC TCAAT GCAGTC              AATCCGTACTTGGCG  45 473
        parC 2291995 .. 2292012 -  -5.5   -2.9176   AACCGCATGCATATA             CAACCCG TACA CGTGTTG              TCGATTCATGGCATC  49 222
LPH40_RS09445 2285796 .. 2285812 -  -5.1   -3.1272   TCAGAAAACCAGACA              TGTCGAT ATG AACGACA              CCTTCGATGATAAAT  52 433
LPH40_RS09415 2281611 .. 2281622 -  -2.2  -4.67478   GAAATACAAAAAGAA                GATG ACCG CACC                 AGCCATATAGCGATT  67 366
LPH40_RS09400 NONE
LPH40_RS09395 NONE
LPH40_RS09390 2279316 .. 2279333 -  -9.1  -3.01712   GCCCGGCTTTGAACA             TGCCGCC TAAA GGCAGCA              TGCGCTGATGCCATG  66 233
LPH40_RS09380 2277526 .. 2277552 -  -7.2  -3.33696   TCGTGGGTCAACCAA         TCGTGCTGCCCT GCG ATGACGGCACGA         TCGTGTTTCTTGAAA  62 244
LPH40_RS09375 NONE
LPH40_RS09370 NONE
LPH40_RS09365 NONE
LPH40_RS09360 NONE
LPH40_RS09355 2275161 .. 2275171 -  -2.4  -4.09685   TTTCATTTGGGAAAA                 CGGC GAT GCCT                 ATCAGGTTGAAATTG  56 367
LPH40_RS09340 NONE
LPH40_RS09335 2273181 .. 2273218 -  -6.3  -2.74019   GAGAATGTGTAACCA   CCCAGCAGCAGTAGTACA GGT CG-ATTGCTGCTGCTGGA   GTGGAGCGTCTGTTG  53 406
LPH40_RS09325 2272622 .. 2272638 -    -3   -2.5409   ACAATCTCCAATGTA             TCC-GCA TGAC TGCCGGA              TGCATCCGCAAGCCG  40 184
LPH40_RS09315 2271607 .. 2271619 -  -6.3  -3.56594   GTAAATCGCTTGAAA                CGTAA GGG TTACG                GGAGTTTTTTCATAA  61 342
LPH40_RS09265 2261253 .. 2261269 -  -2.1   -3.1352   TGCCAATCCAACAGA              GGATCGC GGT GAGGTCC              GATGCATCGCCCCTC  43 113
LPH40_RS09250 NONE
        aroB 2257749 .. 2257769 -  -3.2  -2.99449   TTGGAGAGAATGAGA            CCGTTCGT TGTCC ACAGACGG            GTGTTGCAGCAGCGT  45 199
        hemE 2256377 .. 2256399 - -10.6  -2.77781   TGGTATGAAAACTCA           GTGTTCAGCG CAT CGTTGAACAC           TTTCGACTCTGAATG  71 89
LPH40_RS09225 NONE
LPH40_RS09220 NONE
LPH40_RS09215 2249603 .. 2249629 - -12.3  -5.71712   TCGCACATAAAAAAA         CGGCGGACC CGACGAGGC GGTCCGCCG         TTTGAGGTGCTGTAG 100 47
LPH40_RS09200 NONE
        minC NONE
        minD NONE
        minE NONE
LPH40_RS09180 2242953 .. 2242963 -    -4  -3.34398   GTTTTTCCGTAAAGA                 TTTC CAC GAAA                 GCGGTGTTCCATACG  50 257
LPH40_RS09075 NONE
LPH40_RS09070 NONE
LPH40_RS09065 NONE
LPH40_RS09060 2220966 .. 2220978 -  -4.8   -2.7185   ATTATGTTGGAATGA                CAGC GTGCT GCTG                TTCCTGATGTTATGG  46 79
LPH40_RS09050 NONE
LPH40_RS09045 2216811 .. 2216846 -  -8.4  -2.93858   GATCATATTCATAGA    TGTCTATCGTTAAGAC ATAT GCCTTAACGATAGCGA     TAACATGAGTATTCA  63 38
LPH40_RS09040 2215288 .. 2215308 -  -4.6  -3.38314   GTGAATGGCCAAAGA            TCGCTCCG CATGT CAGTGCGA            TGCGTGAGGGTATTG  52 401
        parE NONE
LPH40_RS08990 2203772 .. 2203797 -  -3.2  -2.96695   TGGGCTATGAAATGA         GGGTGTCGAC AATGCG GCCAACATCC          GACATGCGATGCTGC  45 369
LPH40_RS08985 NONE
LPH40_RS08935 2193763 .. 2193773 -  -2.4  -3.48505   TTCCAAAAACCAAGA                 CCGC TGT GTGG                 TGATGTAGGCTTTGC  47 60
LPH40_RS08930 2190694 .. 2190711 -    -7  -3.71913   GGGATATGGAAAACA             GTGCTG CATCCC CAGCAC              GTCGATAGGGCGCAA  67 329
LPH40_RS08925 2186735 .. 2186752 - -11.3  -5.88197   TCAAAGATAAAAAAA             GAGCCAC ATGC GTGGCTC              TTAAGTTGTATTCAA 100 71
        ppsA NONE
LPH40_RS08900 2180284 .. 2180297 -  -2.4  -3.90298   CTGAAGCAAACACAA               TTGC TTTCTT GCAA                CAATGGGTCGACACC  54 481
LPH40_RS08890 NONE
LPH40_RS08885 2177543 .. 2177586 -  -5.5  -3.06696   TTGGCGTTTAACAGA TAATAAAAAAAGCTCCTTC ATGATG GAAGTTGCTTTGTTTATTA GCTTTCATTTATTGG  51 68
LPH40_RS08880 2175736 .. 2175765 - -16.5  -2.89564   CCTTTATTGGATACA       GGACGCCACACGA GAGA TGGTGTGGCGTCC        GTGGCACTCAGTTGC 100 64
LPH40_RS08870 2172405 .. 2172416 -  -5.8  -2.85056   ACTTTCAATTGAAAT                GCTG ATCG CAGC                 GTCTTTAAAACATTC  52 88
LPH40_RS08865 NONE
LPH40_RS08860 NONE
LPH40_RS08845 2163960 .. 2163981 -  -3.7  -2.95766   TATAAGAGACAAGCA           CTAGGGTAG GAGC CTAACCTAA            GTTAGCTGCTCTTGC  45 27
LPH40_RS08840 2162956 .. 2163012 - -18.1  -2.52676   GAGTCGGTCAAGGGA GTGGGTTGTATTATCTCCTCCGAGTGC AAT GCACTCGGAGGAGAATGTATAACGCAC CGGCTCCGATTCCAA 100 62
LPH40_RS08820 2155307 .. 2155322 -    -9  -3.01712   CGGTGCTCGCCAACA              TGACCG AATT CGGTCA               AACCCCACTGTTGAC  61 355
LPH40_RS08800 NONE
LPH40_RS08795 2145715 .. 2145725 -  -5.4  -2.52464   TCTTGTGGTAACGCA                 GTGA TCG TCAC                 CAGCATTGATGTCCT  48 407
        hrpB NONE
LPH40_RS08785 2141178 .. 2141193 -  -2.6  -4.16016   GTATCTGGGAATAAA              TTGAAA CTAA CTTCAA               TAGAAAATGGAGTAC  59 191
LPH40_RS08780 2139160 .. 2139192 -   -18  -3.21416   TACGGTCATGACCAA      GCTGCATCTCAATA TGTTG TATTGAGATGCAGC      AGGTCTGCCCTCTTA 100 281
LPH40_RS08770 NONE
LPH40_RS08765 2132274 .. 2132284 -  -5.4  -3.79747   GTAGTGATTATTAAA                 CTCT CAC AGAG                 TCTAGGCTTGGTACA  61 82
LPH40_RS08715 2122033 .. 2122045 -  -4.1  -2.57132   GCCCGTGGCGAGAAG                GACGT TCA ACATC                AGGTAGCAAGAATCG  44 24
LPH40_RS08710 2120874 .. 2120900 - -12.3  -2.59482   TAAATTAGGAAGCGA         TGGGCGCCG GATATCAGT CGGCGCCCA         GTAGCTGCTACAGCT  78 44
LPH40_RS08645 NONE
LPH40_RS08640 2112387 .. 2112405 -  -5.8  -4.64598   TAACCAGCTTAAAAA             CGCGGGGG TTC CTCCTGCG             CACGCCGAGGCACAA  75 243
LPH40_RS08630 NONE
LPH40_RS08625 2110330 .. 2110342 -  -3.3  -2.71712   TTCGGTGTTGCAAAG                GCCCT GAT AGGGA                TTACGCCCAGCTATT  42 26
LPH40_RS08620 NONE
LPH40_RS08615 2108972 .. 2109023 -  -2.4  -3.89235   ACCAAATAAAATCAA TGAATTGCAAAGCTATGCCCGCT CCGCAAT AGTG-GTATCGCTCCGCAATTCA CCGCGTGGGCGTGGC  52 23
LPH40_RS08595 2103723 .. 2103736 -  -2.3  -3.14931   TGCATGCTCGACCAA               GGCTT GAAG ATGCC                GCCACACGGTCAGGT  43 255
LPH40_RS08575 2099976 .. 2099987 -  -5.8  -3.31144   GGTGGACTTCTATAA                GGAC CATT GTCC                 TGGCTGTCGTATGCT  57 290
LPH40_RS08505 2081216 .. 2081232 -  -6.5  -3.25088   TCGTAAATCTACCAA              GCCTCCT CTG AGGATGC              TGCGTTGTTTTTGTC  57 519
LPH40_RS08500 2079498 .. 2079514 -  -7.3  -3.10715   GTGATTAGTATTGAA              GTTGGAA GTG CTCCAAC              TTGATCTCGGCAATG  60 371
LPH40_RS08490 2076252 .. 2076265 -  -2.4  -3.16564   GTCCCATCCTACCAA               GGAT GGTTTG ATCC                ACTCTGCCAACGCTC  43 74
LPH40_RS08330 NONE
        atpB NONE
        atpE NONE
LPH40_RS08315 NONE
LPH40_RS08310 NONE
        atpA 2049101 .. 2049123 -  -9.8   -3.5774   ATTCAAGTCGGTAAA           GTAGCGGACC TGA AGCCCGCCAC           AACCGCTACGGTTAC  74 37
        atpG 2048185 .. 2048201 -  -4.3   -2.8655   GGGATTCAGATCAGA              CGGCAGC GGC ACCGCCA              ACGATCTCTGATATT  45 4
        atpD 2046651 .. 2046673 -  -2.6  -2.69977   AGAGGGGACAGATGA           CGAGCCGA GGTTTAT CCGACCCG           TCGTGGATACCAATC  41 52
LPH40_RS08290 2046169 .. 2046183 -    -5  -3.61398   CCCTGTCGGGAAGAA               CATCAA TGC TTGACG               GTGCGGCGGAGGCGC  55 13
LPH40_RS08285 NONE
        glmU 2043324 .. 2043336 -  -3.3  -2.83522   AGTGTCTGATCAAAC                CGGCA CAC CGCCA                TAGGCATTTCAATGT  43 288
LPH40_RS08235 2034592 .. 2034612 -  -2.5  -2.87211   ATGCTGCCGGATAGA            CCGGATT CTGGCGT ACTCCGG            TGAGTGTTACCAAGT  40 252
LPH40_RS08230 NONE
LPH40_RS08225 2032737 .. 2032762 -  -2.5  -4.07885   CAGTCGTCTTGAAAA         CGATCGAGGGCG AGT CCCCCTCCAT-G         AGTTTGAATCTCGCA  55 113
LPH40_RS08200 2029681 .. 2029693 -  -3.4  -4.15565   TGCACGAGGTCAAAA                GATG GTGTG CATC                GCAGTATGATTCGAT  60 44
LPH40_RS08175 NONE
        metF 2018686 .. 2018697 -  -2.2  -2.60901   ATACGGCGAATCAAG                GCTA GGGT CAGC                 TGGTCAGCGGTGGAG  39 74
LPH40_RS08155 NONE
LPH40_RS08145 2013903 .. 2013918 -  -4.6   -3.7282   TCACTTGACTAACAA              GCCCTG TATG CAGCGC               TGCCACGACCCCATC  57 152
LPH40_RS08125 2006982 .. 2006994 -  -4.7  -3.61398   GCGCGCCGGCAAGAA                CGCCG GCG CGGGG                AGACGTTGCCGTGAT  55 76
LPH40_RS08065 1986793 .. 1986829 -  -5.9  -3.14132   GTTGTTTTTGAGGAA   GATGCCG-CTGCTCCAC TGACT GGGGAGCAGGCGAC-TC   ATGAGTTTCTTTGGG  55 156
LPH40_RS08030 1980100 .. 1980112 -  -5.5  -3.04715   TAGGCGGGTCAAAAG                GCCTA TGT CAGGC                GACCTCCTGCGAAGG  51 20
LPH40_RS08025 1979565 .. 1979580 -    -4  -4.07568   TCTTCGCCTCTAAAA              TCTCCT GGTA AAGAGA               TGCAATCTTGGAATA  60 119
LPH40_RS08015 1978022 .. 1978036 -  -4.2  -3.16191   CTACAGTTCTACGAA               CGTGGC ACC ACCACA               CCCAAACTCACCTGG  47 446
LPH40_RS07985 1974225 .. 1974252 -  -2.6  -2.55351   CTCGGGGATAGCAAG        GCGTGCTGGCTCA TGG CGAGACA-CCCGC        GTTAACAACCGCTTT  40 8
LPH40_RS07980 NONE
LPH40_RS07975 1972596 .. 1972606 -  -2.4  -2.80816   GTCCCATGTAGGACA                 GGGC CCC GTCC                 GCATCTACTCTTGCT  40 30
LPH40_RS07970 NONE
LPH40_RS07965 1971755 .. 1971773 -  -5.8  -4.64598   TAACCAGCTTAAAAA             CGCGGGGG TTC CTCCTGCG             CACGCCGAGGCACAA  75 264
LPH40_RS07955 NONE
LPH40_RS07950 1969698 .. 1969710 -  -3.3  -2.71712   TTCGGTGTTGCAAAG                GCCCT GAT AGGGA                TTACGCCCAGCTATT  42 26
LPH40_RS07945 1969422 .. 1969434 -  -4.1  -3.40611   CGCATCGTAACAACA                CCTTA GTC CAAGG                CCGCAAAATTAGGGC  50 15
LPH40_RS07940 1968091 .. 1968103 -  -3.3  -3.98172   ACTAAGAGCGAGAAA                CAGGG AAA CGCTG                AATCCTTGCCACGCA  58 272
LPH40_RS07915 1961889 .. 1961899 -  -3.2   -2.7263   ACCATTGTCGGAAAC                 CAGC CTT GCTA                 AGAGATGCTCTGGCC  42 40
        dprA NONE
LPH40_RS07905 1960133 .. 1960146 -  -2.3  -2.95656   AATGGAATGCATACA               GCAGG TAGG CCTGT                ATATGTTGAGCGCTT  42 40
LPH40_RS07900 1958991 .. 1959001 -  -5.4  -3.65529   ATAGGCCTAGGGAAA                 TCAC GGA GTGA                 CGAAAGTATCACACA  59 56
LPH40_RS07895 NONE
LPH40_RS07890 1955328 .. 1955340 -  -7.7  -3.78329   TGTGACCAAGGTAAA                CCATC AAT GATGG                TGGCAGGTGATCCGG  68 304
LPH40_RS07885 1954093 .. 1954111 -  -3.2  -2.76225   AAGTAACCGTAACCA             TCCTAGAT GGC ATCTAAAA             CTTTTTCTACCTTGC  43 108
LPH40_RS07880 1952841 .. 1952853 -  -4.7  -3.55447   TCATTCAGCAGAGAA                GACGC ATA GCGGC                CAAGTTGATATGCAG  55 220
        wrbA NONE
LPH40_RS07865 1948365 .. 1948378 -  -3.1  -3.50393   TGGCACCGGATACAA               GCGGTG CAT CAC-GC               CATCTTGATTGATTC  49 253
LPH40_RS07860 NONE
LPH40_RS07855 1947512 .. 1947523 -  -5.8  -4.06179   CTGAAAACGCAGAAA                GACG CTAT CGTC                 GATCTGGTCAATTTG  66 159
LPH40_RS07755 1927362 .. 1927391 -   -10  -3.15249   CAGACGTGCTATCAA       TGGGCTTACCCG TCTCAG CGTGCAAGCCCA        TTGATGAAAGGGACG  70 10
         zwf NONE
         glk NONE
         pgl NONE
         edd NONE
LPH40_RS07725 NONE
LPH40_RS07720 NONE
LPH40_RS07715 1918523 .. 1918548 -  -6.9  -4.27886   TGTTAAACACAGAAA         CCTTCGACATT GGGG AGTATCGAAGG          TATGGCGTCCCCACG  71 28
LPH40_RS07710 1918267 .. 1918290 -  -3.8  -3.46474   ACTAAAAATGAAAAT          GCCCGG AACCTTCACAAG CCGGGC           GTTTCATAGTGAACC  52 75
LPH40_RS07665 1912050 .. 1912064 -  -5.7  -3.88291   CAGTATCGTTACAAA               GTCAC GGCTG GTGAC               CGCTACAGTGGGGTG  64 454
        pyrH 1908564 .. 1908575 -  -4.4  -3.01712   CGGCGTTGCTGAAGA                CAGT TGAA ACTG                 AAATGAAGTGCTGTG  47 505
LPH40_RS07650 1906909 .. 1906932 -  -8.1  -2.78384   TGGCTGTCCATGACA          GAACCCGGC TTATAG GCCGGCTTC           ACCGTTTCCCCATTA  59 483
LPH40_RS07630 NONE
         frr NONE
        uppS NONE
LPH40_RS07610 NONE
         dxr NONE
        rseP NONE
        bamA NONE
        lpxD NONE
        fabZ NONE
        lpxA NONE
        lpxB NONE
LPH40_RS07570 1888237 .. 1888255 -  -4.4  -3.18869   GAATAAATGAGGGAA             GTGCGTTG TGT CGGCGCAC             AGCGTCCGGTTGGGC  48 122
LPH40_RS07560 1884802 .. 1884823 -  -3.7  -2.71731   TTGATTGGCGAATGA           CTTACCTGA AAAA TCAAGAAAG            TAGTCTGAATCTCAA  42 484
        ahcY 1881904 .. 1881936 - -12.7  -3.47227   TCTGAAGCACCATAA      TGCCCGTCGTCCG GTTGCGT CAGTCGACGGGCA      TGTTTTCTATGGCTT  89 414
LPH40_RS07545 1876506 .. 1876518 -  -4.7  -2.88544   TTTCATGGTGATAGA                TGCGG CCA CCGCC                ATTCACTATGTGTGG  47 53
        plsB 1873807 .. 1873819 -  -3.4  -3.72576   CGTCGTGCCAGCAAA                GATG TAGAC CATC                ATCATCGACAATGGC  53 69
LPH40_RS07530 NONE
LPH40_RS07525 1869045 .. 1869060 -  -3.2  -3.06501   TATAGCGTGATTCAA              GTCCGA TGAG TCTGAC               GCAGACGCAATCGCT  45 120
LPH40_RS07510 NONE
LPH40_RS07505 1862517 .. 1862532 -  -3.2  -4.01419   GAGCAATGAATCAAA              GACGAT ATGC ATCGAC               TTAACTCGGCTGAAC  58 26
LPH40_RS07500 1861558 .. 1861599 - -13.2  -4.18494   TACGGTCAGTTAAAA GCCCAGGAGAAAGCCGCTGG CAAA CCAGCGGCTT--TCCTGAAC ACGTGAAGTACTGAA 100 47
LPH40_RS07495 NONE
        tesB 1858578 .. 1858590 -  -3.4  -3.53012   GCGCTGGCTGTTAAA                GATG GCACG CATC                GATTAATCCTTGGGC  50 28
LPH40_RS07485 1857772 .. 1857783 -  -2.2  -3.06569   CCAAGGTTGCAAAAG                CGAC GTGC ATCG                 TATTGGTGTTTCACA  42 340
LPH40_RS07480 1856316 .. 1856329 -  -2.3  -2.73483   ATGTCATCGCAAGGA               GACGG TGTG CCGTT                GCTGTATCGGTCGGA  39 409
        mntR NONE
        tadA 1849051 .. 1849065 -  -5.7  -2.56596   CTCTTTACGAAGTCA               GGAGA CGATC TCTCC               ATCCTTTTCAATCAT  48 491
LPH40_RS07415 1841272 .. 1841307 -   -12  -2.81815   GTGAATTACTAATGA    TGACCAAGGGACTTAA CTAG CTAAGTCTCTCGGTCA     TAGGGTTTAACTGCA  80 32
LPH40_RS07380 NONE
LPH40_RS07375 1835917 .. 1835931 -  -2.7  -4.07568   CTGGCGCTTGCAAAA               GCCTG CGGAC CTGGC               CCAGGAAACCCTGAT  58 405
LPH40_RS07365 1834358 .. 1834387 -  -2.8  -4.84359   CCAGGTTGATAAAAA       CAGGGCAGGCACC GTCAA AGCGCCTG-CATG       CGACACATCAGTTGC  71 33
LPH40_RS07360 NONE
LPH40_RS07355 1833459 .. 1833491 - -21.4  -3.21099   TGGTTTCAGTAGGAA     GCC-CCCGCCATCGG CGTA CCGATGGCGGGAGGC      GCTACAGACAGCGAT 100 40
LPH40_RS07350 1832993 .. 1833037 -  -6.4  -3.65351   TGATGTTTATCCAAA CGGGGACAGCGG-CATGGC TCGTCCAG GCGATGGCAGCCATCCCCG GTCAATACGGCTTAC  63 37
LPH40_RS07345 NONE
LPH40_RS07340 1830605 .. 1830639 - -16.5   -3.3785   TCAAGCGAGCCAGAA     CGTGGGAAAACTGGC TCGTC GCCCGCTTTCCCACG     TTCGATGCCACGCAA  90 215
LPH40_RS07265 NONE
LPH40_RS07260 1820653 .. 1820664 -  -5.8  -2.54193   GACGACTTCAATGGA                GTCG ACCA CGAC                 ACGATAGATCACGAT  50 41
LPH40_RS07255 1819579 .. 1819591 -  -4.1  -3.48593   CAGTGCCTCAGACAA                CGATA TTT CATCG                AATTATTTTACGCTT  50 365
LPH40_RS07245 1816105 .. 1816138 -  -5.4  -3.01791   ATCTCTTTTTCAATA    TGATGGGATGC-CCCT GCAA AGGAAGCATCCC-CCA     TCAATACGTGCCGCA  51 108
LPH40_RS07195 1804690 .. 1804730 -  -5.4  -4.16016   TGATGCGCGAAGAAA CGCCGCAGCTGTTCTGGCG TTCC CGCCACAACAACC-CAGCC  AATGTTTTTTACTAC  64 195
        cysS 1796882 .. 1796902 -  -8.3  -2.56604   ACAAGCCATAAAACG            CACTTGCTG ATG CATCAAGTG            ATTGCCGCATGTGTT  60 53
LPH40_RS07160 NONE
LPH40_RS07155 1794751 .. 1794785 - -11.4  -2.52543   ATGCTTGTCAAGCCA     TGCGTCAAGATCGTCA TCA TGGCGGTCTTGACGCT     TACGGTGCACGGCTA  75 270
        yidD NONE
LPH40_RS07120 1789562 .. 1789582 -  -7.6  -2.79803   CAACTGCAGGTAAAG            TCAGCATG ACTAA CATGCCGA            GTCTGAGCAACTTGT  59 59
LPH40_RS07115 1788317 .. 1788331 -  -2.8  -3.25088   TTTCAAACGCATCAA               TGACGA ATA TGGTCA               TGCTGCTGGAGACGC  46 459
        htpG 1779981 .. 1780002 - -15.9  -3.41051   GGACCGTGAGGACAA           TGCCCCTGG ATGT CCAGGGGCA            TTGCTGGTGTATCGG 100 94
LPH40_RS07065 1774493 .. 1774524 -  -5.3  -3.14211   AGCGGTGGTGATGAA     TGGCTGCTGCA-GTG ATTG CACGTACAGCAGC-A      TTGATGGCCTTATGT  52 63
LPH40_RS07060 1771937 .. 1771958 -    -3  -3.15249   CAGATTGCCTATGAA           CTGGGTTT GGCGGA AAACACAG            TCAAGGTGCATGTGA  43 163
LPH40_RS07035 NONE
LPH40_RS07030 1764700 .. 1764712 -  -2.7  -2.85668   GAGGGTCATACGAGA                TTCCT TGA AGAAA                TTGAAAGTAGGCGTG  42 65
        phbB 1763921 .. 1763944 -  -2.4  -3.10464   GTAGTAAGGTGAAGA          CGTG-TTGCTA TGG CAGCGATCACG          TGTGGCCCTTATTCC  43 34
        acnA 1728225 .. 1728245 -  -6.7  -2.71712   GCGTTGCTGGTAAAG            CGCTGGTGC CTG GCTCAAGCG            GGCTTGCGTGTGTTC  53 19
LPH40_RS06865 1725181 .. 1725201 -    -4  -4.13304   AAATGAGGTCCAAAA            GTGCTGAT CAGGT ATCAGGAC            GATCCATGGAGAGAT  60 66
LPH40_RS06860 1722663 .. 1722686 -  -3.8  -4.08394   AGAGTGTTGCCAAAA          TCGAGGTCAG GGTG CTAACCCCCA           AGCCGGTTAAGTCCG  60 329
LPH40_RS06855 1720603 .. 1720613 -  -6.8  -2.84602   GGTAGGTGAGGAAAG                 CTGG TGG CCAG                 TCGGTTAGACCAGAG  54 126
LPH40_RS06850 NONE
LPH40_RS06845 NONE
LPH40_RS06840 1719139 .. 1719149 -  -5.4  -2.97902   GAAGAGGATCATATA                 TCCA TTG TGGA                 GCAGGTTGAAGCACC  51 64
LPH40_RS06835 1718005 .. 1718016 -  -3.6  -3.05844   TGTTCTATTCCAACA                GCCG TGCC CAGC                 GTTGCAAATCCTCGA  45 3
LPH40_RS06830 NONE
LPH40_RS06825 1715807 .. 1715843 -  -3.6  -3.53444   GGATGGTGTGTCAAA    CAGTCGGCATCCTG TTGTATGTG CAGGTGGCTGACTG    TAGTTGGGTATGGTG  50 280
LPH40_RS06800 1709231 .. 1709244 -  -2.3   -4.0162   CCGTGACAGGATAAA               TGTCG TACC CGTCA                TGTGGAGATATCCAT  55 149
LPH40_RS06785 1704993 .. 1705003 -  -6.8  -2.60075   CTTGCTGGAAGCAAG                 CGGA ATG TCCG                 AGCATCAGGTCTTAA  53 90
LPH40_RS06780 1703549 .. 1703570 -  -6.5   -3.3056   ACAAGAAGATTAACA           GTCAATCGG ATCA CCGCCTGAC            TCGGCGCCGTGTCGG  56 474
LPH40_RS06770 1701384 .. 1701406 -  -6.2  -3.62096   GTTCATCAGTCCAAA           GGGGCCATTC CAG GAATGGCAGC           CGTAGTGCGTGGGAC  61 69
LPH40_RS06755 1693313 .. 1693328 -  -3.2  -3.57144   TGCGTGATTCTGAAA              GCATGA ATTT TCCTGC               CGAACATCAACACGC  50 516
LPH40_RS06750 NONE
LPH40_RS06745 1692309 .. 1692320 -  -4.4  -4.13767   GCCGGTACCCTAAAA                CTGT TAGC ACAG                 CAAAACTATATCTTG  60 321
LPH40_RS12015 1691303 .. 1691316 -  -5.3  -2.91264   CTTGCCAGCGAGATA               CTTGA TGAA TCAAG                TAAGCCAACGATGCT  49 274
LPH40_RS06720 NONE
LPH40_RS06715 NONE
LPH40_RS06710 1683470 .. 1683492 -  -7.6  -2.71712   GGCTGGTCCGCAAAG           GATGCCTGCG GGT CTCTGGCATC           TGACGGCAGCCGGTC  53 448
LPH40_RS06685 NONE
LPH40_RS06680 NONE
LPH40_RS06675 1676115 .. 1676134 -  -7.2  -4.11484   GCTAACGCTCTAAAA            CATGGCTGG TAG CCAGC-ATG            GCGCCCATGGAAGAC  71 87
LPH40_RS06670 1675149 .. 1675164 -  -2.6  -3.14132   TCCTGCGGCTAGCAA              TATCCA GATG TGAATA               CCTAAGGTTGACGTT  45 236
LPH40_RS06660 1673199 .. 1673217 -    -6  -3.53012   CTTTGTGCTTGGAAA             CCATGTCA AAT TGACACAG             ATGGCGGTGTTGTAT  59 199
LPH40_RS06655 1671761 .. 1671774 -  -2.3  -3.67296   CATCACCCAGTTAAA               CAGCG GTGT CGCCA                TCAATGTGGAGAGGA  50 47
LPH40_RS06650 NONE
LPH40_RS06645 1666543 .. 1666557 -  -4.2  -4.14392   GGCCAATGCTCAAAA               TCATCG TTT CGCTGA               TTTCTTCAGGGTACG  62 149
LPH40_RS06635 1663742 .. 1663777 - -22.2  -2.79183   TCCATCCTTAGCACA    TCCATTCATAACCTCG TTTA CGAGGTTATGAATGGA     TGTGCTAAGCATAGA 100 55
LPH40_RS06560 1644962 .. 1644972 -  -5.4   -3.2048   TTTAAAGGTCAGCAA                 GCAA GAT TTGC                 TGCCGAAGACGAAAG  50 230
LPH40_RS06515 1634205 .. 1634221 -  -3.6  -5.38054   GCTCACAAATAAAAA              CGCCCA ACCGA TGGGAG              GTATGAGCGTGGAAT  81 43
        pstS 1630594 .. 1630619 - -11.8  -4.42287   TAAAGAATCAATAAA         GGGACGCTGC TTGGAG GCTGCGTCCC          AATCATTGTGATTAA  93 62
LPH40_RS06470 1621863 .. 1621883 -  -3.3   -4.6821   AAGCGGAATAGAAAA           CG-CAGCA GTACGG TGCTGACG            ACTGGCATTAGTAGC  69 33
LPH40_RS06455 1617861 .. 1617887 -  -7.2  -3.14132   CTGTGGTCGGAGGAA         GGGACAAGCCTT GAC AGGGCCTGTCCT         GACCCAAGTTTAAGG  60 447
        dnaE 1614142 .. 1614152 -  -6.8  -2.76492   GGATTCATGGCAAAC                 CGTC TTT GACG                 TAAGGCGGCAAGTGT  54 102
LPH40_RS06445 1612813 .. 1612835 -  -4.9  -3.54919   AACCATGGTTGGAAA          CGGCA-GCAA TTGG TTGCATGCCA           AGGTTGGGTTGGTGA  54 365
LPH40_RS06435 1611809 .. 1611826 -  -5.6  -3.32963   ATCTCGAGCCCAGAA             CTGCTT TGCTGG AAGCAG              CCTGGTGTAGTGAGG  54 91
LPH40_RS06430 1610051 .. 1610061 -  -5.4  -3.04461   GAGGGATCTTTAATA                 GGAT ATT ATCC                 GGATTCGCTGTTTCT  51 359
LPH40_RS06420 1607434 .. 1607460 -  -6.6  -3.08464   TTACGATGCAGGTAA         GTGTGTAGCA GGATTAT TGCAACACAC         GTACCTGTAGGCTGT  55 270
        nudE NONE
        cysQ 1598183 .. 1598198 -  -3.3  -2.74999   GAATGGGGAATAGGA              TGGTT CAGGCC AACCA               ATCGCGCCAAGGCAG  43 14
        mazG 1596937 .. 1596950 -  -5.3  -4.89567   GTTGAAAAGATAAAA               CCATT TAGA AATGG                TGAAAGCGTGGTACG  78 396
LPH40_RS06375 1595686 .. 1595696 -  -2.4  -3.09834   CAGCGCATGACTCAA                 CCTC GGT GCGG                 TGGTTGAGACTGTGT  43 11
LPH40_RS06370 NONE
        gcvT 1593534 .. 1593545 -  -3.6  -3.01791   AGGTCTGTCCGAATA                GCGC ATTG ACGC                 CATAGCTATGGAACG  45 462
        gcvH 1592745 .. 1592764 -  -6.4  -3.14132   TCCTGTTCGGATTAA            CAGTGGAT TGTG ATCCTCTG             CCACAGATACGCTTT  57 81
LPH40_RS06355 1591012 .. 1591048 -  -6.6  -5.43974   AAAAGGAAATAAAAA   GT-CCTCTTCCCGATGG GCAT CGGTCAGGAAGAGGGAC    GGATAAACTATGATC  93 50
LPH40_RS06345 1587691 .. 1587703 -  -4.8  -3.53563   ACAGCGGCCTGGAAA                CTGG TGATT CCAG                TTGTCAAGTGGGTGT  55 29
LPH40_RS06340 1585234 .. 1585257 -  -8.2  -3.09834   CATTGGAGCAGGGAA          CCCAACAAGCG ATC CG-TTGCTGGG          TCAGCAGTTGCTTTG  64 283
        fabG 1579401 .. 1579415 -  -2.1  -4.64598   GAACTATTCGAAAAA               TGAGC ATGTG ACTCA               ATCGTATTGAGTACA  63 437
LPH40_RS06315 1576945 .. 1576956 -  -4.4  -3.55444   CTGTGATGGTGTAAA                GAAG AGCT CTTC                 TTCAAGATCATGAGC  52 300
        ccsA 1572617 .. 1572645 -  -3.7   -3.6543   GAAGCCGGCAAAATA        TCTGCCCAACGTT ATC AGCGCTTGGCTGA        AGTGGTTAAGGATAT  52 339
LPH40_RS06265 NONE
LPH40_RS06260 1562008 .. 1562018 -  -3.2  -3.53012   TTTTGTTTGGTGAAA                 CGGT TGG ACCA                 GTTTGCTATTTTCTA  50 41
LPH40_RS06245 1558079 .. 1558097 -  -3.1  -2.71011   ATGGGTGCGGAAGTA             TGGCCTT GCATG AAGGCGA             TGTGCATGGCAGCAA  41 522
LPH40_RS06210 1551718 .. 1551753 -  -7.7  -4.08485   CTGAGGCAAAGTAAA   GCGG-T-GCCAGCTCACT GGA AGCG-GCTGGCAAGCCGC   CAATTCCCCATTCGA  73 57
        pyrE NONE
LPH40_RS06195 1548336 .. 1548348 -  -5.5  -3.02144   GTATGGCTTTGAAGA                CGCAC TGT ATGCG                GCGGTGCGTTTGCTG  48 407
        radC 1543818 .. 1543836 -    -3  -2.64099   CGTCTGTATGAGAAG             CTTGCTGA CGT TCAGCTTG             TGCTCTGCTTGGCAT  41 73
        argS NONE
LPH40_RS06165 NONE
LPH40_RS06160 NONE
        speE 1536782 .. 1536809 -  -6.9  -3.53444   TCACCGCGTCTGAAA        CCGGCAGCCTT ATCCCG ATGGCTGCCTG         TGGAGGTGAGCCAAG  61 198
LPH40_RS06145 1535955 .. 1535970 -  -5.4  -3.55889   ATAGAGCAATGACAA              GGAGTA CGAC CACTCC               TACGAAGTAACCGAA  56 236
LPH40_RS06140 1535104 .. 1535119 -  -3.2  -3.72576   GCTGGTTTGAGTAAA              GAACCC GAAC GGGTTT               TAAGTGGAGTGCACA  53 64
LPH40_RS06130 1531934 .. 1531975 -  -7.4  -3.31183   AGAATCCAAATCCAA TGGCAGCGAGCGCTACCCTG GCGA CAGCGTAGCG-TCGCCAC-A GCATGCTCCAACTGG  62 65
LPH40_RS06115 1527978 .. 1527994 -  -4.3  -3.72695   ATGCGCCTCATGAAA              GTAGGCC AGA GGCTCAC              GATGAGAGCGGCTAT  55 70
LPH40_RS06110 NONE
LPH40_RS06105 NONE
LPH40_RS06100 NONE
LPH40_RS06095 1523821 .. 1523836 -  -3.2  -3.38991   ACGCGGCCAATAACA              CAGGCA TAGG TGCGTG               ATCCCATGATGCAGG  48 115
LPH40_RS06075 NONE
LPH40_RS06070 1516026 .. 1516040 -  -2.7  -4.42653   ACGGCATCTAGAAAA               GCCGC ATTGA GCGTC               TCACCACCTTTACTC  62 35
LPH40_RS06040 1508220 .. 1508235 -  -2.6  -3.70149   TGCATATCACGCAAA              TGT-TCC AGT GGACACA              TTGTGTGCGACTGAT  51 101
LPH40_RS06030 1503807 .. 1503835 -  -9.5  -3.05384   CGCTGTCCTAGTGAA        CTTGACGCCTCAC CAC ATGCGGCGTCATG        CAGGCTTGGGGTGAC  69 51
LPH40_RS05960 1484750 .. 1484760 -  -2.4   -4.1822   CGCGACGGTAAGAAA                 GCAG GTC CGGC                 AGACGGATAACGGTA  57 232
LPH40_RS05940 1481587 .. 1481602 -  -5.4  -3.05596   CACGTCGTGATGCAA              TCGCAA CATG CTGCGA               TTGTTGTCGATGTGT  51 91
        ilvD 1478640 .. 1478650 -  -2.4  -4.68724   TCATCCAAGATAAAA                 CGGC GTT GCCT                 GAAGCGAGCTACCCG  69 262
        rlmE NONE
        ftsH 1474606 .. 1474629 - -14.6  -2.85257   TTTCAAAGACACAAT          CGGCCCTGGA TTGC TCCAGGACCG           GGGTTGTGGAGGTAC  90 59
        folP NONE
        miaA NONE
         hfq NONE
        hflX 1470771 .. 1470782 -  -4.4  -3.37537   TATCTTAAAACTTAA                GTGT GGTA ACAC                 CGAGTGTCCGCCGTA  50 10
LPH40_RS05880 1469336 .. 1469349 -  -4.5  -3.35679   TGTTGGTACGCATAA               TGAGG GAAT CCCCA                TTGTTGTTGTAGCTG  52 80
LPH40_RS05875 1468568 .. 1468579 -  -4.4  -3.36492   TTCGGAACTGGATAA                CCTT GACG AAGG                 TTGTTCAGAAGGATT  50 278
LPH40_RS05870 1465477 .. 1465518 - -10.3  -4.90778   GCTACTGAAATAAAA CGCAGCAAGACGACGCACG GAATGA CGTGCGTCATCC-G-TGCG CAGTTATCGCTTACT 100 36
LPH40_RS05865 NONE
LPH40_RS05860 NONE
LPH40_RS05855 1460401 .. 1460417 -  -2.1  -3.86015   CATCGGTCTGATAAA              CATTGGC CAT GCCGCTG              ACTGCTGTTATTCGG  52 474
LPH40_RS05850 NONE
        ccsA 1453129 .. 1453157 -  -3.7   -3.6543   GAAGCCGGCAAAATA        TCTGCCCAACGTT ATC AGCGCTTGGCTGA        AGTGGTTAAGGATAT  52 339
        ubiA 1437387 .. 1437403 -  -8.7  -2.64155   GCTTCGTCAAAGTCA              GCGTGTA GTA CACACGC              AACTTGCTCATTATG  61 446
LPH40_RS05765 1433523 .. 1433533 -    -4  -2.62735   ATATTTTTCAGATCA                 GAAT TGC ATTC                 AGAGAAGATATTGCC  44 82
LPH40_RS05760 1432906 .. 1432920 -  -4.2  -2.84574   CATCCTAAGCAACGA               CAATGC TCA GCAGTG               ATTTGATGACATTCC  45 165
LPH40_RS05755 1430036 .. 1430052 -  -6.6  -3.65353   TGAAAGGATCCGAAA              CGAAAC AGCGA GTTTCG              AACTTCTGAAGATTC  63 301
LPH40_RS05750 NONE
LPH40_RS05730 1423408 .. 1423424 -  -5.1  -2.80935   AGGTGATCGAGCACA              TGAGAGA CGT TCACTCA              AGGATTCTACCGTGG  49 461
        uvrD 1421065 .. 1421090 -  -8.3  -3.61178   GGCATGTATTTCAAA         CCTCCA-CTGCA CCT TGCTGGTGGAGG         CGCGGGTGGCCATCC  69 170
LPH40_RS05675 NONE
        mscL 1406999 .. 1407024 - -15.5  -3.20432   AGATACGCAATGGAA         CACCAGGTACC TGAA GGCACCTGGTG          TTCATATGCCCTATG 100 140
        pyrF 1403137 .. 1403149 -  -3.3  -3.62597   TGCACGGTTGAACAA                TTGCG TAT CGCTA                TTGAACAAGAACGAT  53 127
LPH40_RS11995 1394154 .. 1394175 - -11.6   -5.4505   GTGGGCAATAAAAAA           GCCGCCAA AATATG TTGGCGGC            TTTCAAGGATGCGAA 100 51
LPH40_RS05625 1392953 .. 1392965 -  -3.3  -3.64822   ATGGTTGGAGCGAAA                CGCGC GTG ACACG                ATGATCATTGGTTGG  53 51
LPH40_RS05620 1391928 .. 1391941 -  -2.3  -4.18018   TCGTTTCAGTGAAAA               GGGCT TGGG AGTCC                GTCTGACAGATAACG  57 142
LPH40_RS05615 1390278 .. 1390289 -  -2.2  -3.84246   GGTCGAATGATCAAA                CAGA AATG CCTG                 CCACTGGGTTGGCGG  51 328
        rpmH NONE
        rnpA NONE
        yidC NONE
LPH40_RS05510 NONE
        mnmE 1363114 .. 1363147 -  -7.4  -3.75332   ACGGTTTAAGGTAAA     CGACGAGATCTCCG GAAACT CGGAGACCTAGTTG      CTCTTGTCATATGCT  67 174
LPH40_RS05490 1359044 .. 1359062 -  -3.9  -3.92324   GGTTGCAATATGAAA            TGGTGGTG CTAA CAC-ACCA             CAGTAAGCACGTCCT  57 69
LPH40_RS05485 1357428 .. 1357475 -   -13  -3.73072   AACCGGGTCACCAAA GATTAG-GCATCAGGCTCAGCC GTTGAT GGCTGAGCC-AATGCACCAATC ATCCGCGATGCATGA  90 75
LPH40_RS05460 1352890 .. 1352908 -  -4.5  -3.56921   TGGAACACAACAACA            GCAC-GCG TGAT CGCCGCGC             AACCTTCAGAGAAGC  55 129
LPH40_RS05450 NONE
LPH40_RS05445 NONE
        coaE 1346841 .. 1346877 -  -8.1   -2.7263   AGGACGCCGCCAAAC   TGTTCCAACGTGGGTA TCGCGG TACCCACGCAGG-ACA    CTCGCAAGGTGGTGG  57 448
        thrS NONE
        infC 1337119 .. 1337136 -  -7.7  -4.17296   CTTCACACAGAGAAA             CCAGCTC CAAA AAGCTGG              GCTCTTAGTATCCCA  75 104
        rpmI NONE
        rplT 1336242 .. 1336270 -  -8.2  -3.37537   GACTCTAAAACGCAA       CGTGG-GAAGGAC TCAT GCCCTTCCCCACA        TGTCTGCACTATATA  66 161
        pheS 1335089 .. 1335102 -  -3.1  -4.55826   GGTAAAAGAGCAAAA               TGG-GC TAA GCACCA               CCGAAATACGGCAAG  65 62
        pheT NONE
LPH40_RS05385 NONE
LPH40_RS05380 1331897 .. 1331909 -  -6.2  -2.73875   CCCCGCTCAACAGCA                CGCC GGTGT GGCG                GCAGGGCGCGATTAT  51 125
LPH40_RS05375 1331548 .. 1331558 -  -3.2  -4.08767   CTGATCCTCTGAAAA                 GCAA ACA CTGC                 CATCTGCACGGGCAA  58 277
LPH40_RS05370 1330453 .. 1330466 -  -3.7   -3.6106   GGCAACAGTTTCAAA               CGCGG GATG CCGAG                TGGCCACGGTGCATT  50 458
LPH40_RS05350 NONE
LPH40_RS05345 1323378 .. 1323392 -  -7.1  -3.59979   CTGCTGGACGCCAAA               CTGGC ACACG GCCAG               CTGCGCGTGCGGGTG  60 119
LPH40_RS05335 NONE
        tsaE NONE
LPH40_RS05325 1318048 .. 1318068 -  -6.1  -3.55761   CAGGCATCCGGGAAA            CCCGGAT CAACGGC ACCCGGG            CTCCGGTTCACTCCA  59 68
        mutL NONE
LPH40_RS05315 1315062 .. 1315072 -  -4.6  -3.21395   ACCGCGGTCATAACA                 GGCC ATT GACC                 GAAGCAACGACCATA  50 101
LPH40_RS05295 1311423 .. 1311445 -   -12  -3.14931   CCCACCCGTCAGGAA           TCGCCAGCCA CGG TGGCTGGCCA           AGCTGAGCAAGCACC  82 525
LPH40_RS05285 NONE
LPH40_RS05280 NONE
LPH40_RS05275 1309174 .. 1309205 - -11.7  -2.63301   CACATCGGCACATCA      CCGCTCT-CGTGAG CAAAC CTCACGTAGAACGG      CCATGACATAGCGCG  75 13
LPH40_RS05270 NONE
LPH40_RS05265 1305915 .. 1305941 - -13.1  -3.25282   ATGAAGCACCAGCAA        GGCAACGAC-CG GGCT CGCGTCGTTGCC         TCCACAGCAAAGCAA  84 315
        thiS NONE
LPH40_RS05245 1302872 .. 1302887 -    -4  -3.10343   ACATCCATCATCCAA              CCAATC CCTC AATTGG               GCTGGACGCCGCAGC  48 2
        trmB NONE
LPH40_RS05235 1299941 .. 1299959 -  -4.5  -3.75153   TGCCTTCAAGGTAAA             CACGCCT AAATG ATGCGTG             TATAGCCTCTCATCA  57 306
LPH40_RS05230 1297690 .. 1297721 -  -2.2  -3.05384   TGCGGTGCCAGGCAA      TCGGACCACCCTGTG TCG CACATGG-GTTCCCA      CTCACAACCTGAGAT  42 27
        rsmH 1296717 .. 1296741 -  -6.3  -3.36878   ACAGAACAATCAACA          GAAGGCGGCTC ATT GCACCACCTCC          AACCTATCCAACTTC  59 10
        ftsL NONE
LPH40_RS05215 NONE
LPH40_RS05210 NONE
        murF NONE
        mraY 1290659 .. 1290672 -  -2.3  -4.15044   GCCTGGCGCAAGAAA               GCGTT CATC AGCGC                ACCTTCAACGTCGCC  57 19
        ftsW NONE
        murG NONE
        murC NONE
LPH40_RS05180 1285805 .. 1285815 -  -3.2  -3.47841   ACACGCACATCACAA                 CGCT GCC AGCA                 CAACATGCACACCCG  50 75
LPH40_RS05175 NONE
        ftsA NONE
        ftsZ 1282054 .. 1282090 -  -7.2  -3.10727   CAACAGACACATACA    GCGGCCAAAACCACTG AGACG CAGAAGTTATGGCAGC    ATATAAAGCGCGCGT  60 223
        lpxC 1280913 .. 1280923 -  -6.8  -2.74741   ACGAGATTGGAACCA                 CACG ACC CGTG                 GCATCGTAACCGGTA  53 117
LPH40_RS05150 1279376 .. 1279394 - -12.4  -4.72272   CGCCGTCAGCAAAAA             CAGGGCGC ACT GCACCCTG             TTCGTGGTCAATCCA 100 92
        secA 1276516 .. 1276530 -  -3.5  -3.77832   CCTCAAAGCTAATAA               GCCTC CCATC AAGGC               ATCTCTGAAGATCGG  53 52
LPH40_RS05130 1271047 .. 1271057 -  -4.6   -3.1739   ACATGATGCGAGTAA                 GCCC GTA GAGC                 GTCGTTGCGTGTATG  50 230
LPH40_RS05120 1266477 .. 1266491 -  -8.6  -3.10464   CGATCAAGGGCAAGA               TCCAGA AGC TCTGGA               GCGCATATGGGTCAC  60 189
LPH40_RS05110 1263181 .. 1263191 -  -6.8   -3.9534   AGTCACATCCAGAAA                 CAGG ACA CCTG                 TCGGACCCAAGGAGG  66 109
LPH40_RS05085 1259234 .. 1259256 -   -12  -2.52279   GCAGCAAACATACAC           CGCCGTTCCA ATC CGAAACGGCG           CTCCCACATCGTGGA  78 116
LPH40_RS05080 1257423 .. 1257439 -  -4.3  -3.44319   TTGAATTGACCAGAA              CGCCACG CGA CACGGCA              CGCAGCACCACAGCG  52 42
         pyk 1255209 .. 1255221 -  -3.4  -3.28447   GCATCGACCACAACA                GCAA AATCA TTGC                TTCCCCAAGATCTCC  48 75
LPH40_RS05070 1254925 .. 1254950 -  -3.2  -3.54129   CACATCGGTTGCAAA         CAGCACCCTA CCTAAC TAGGGAGATG          CAACCAGCACCCACC  50 7
LPH40_RS05065 NONE
LPH40_RS05060 1253433 .. 1253464 - -15.9  -2.64144   GCGCCATCTAAACAC      CGAAGGCACCGGC ATCGCA GCCAGCGCCTTCG       CCACAATGACCAGAC 100 55
LPH40_RS05055 1251680 .. 1251713 -  -7.3  -4.11484   GCGAAGTGCTGAAAA     TCGCTCGCCCGGACG TCAA CATCACGGCTAGCGA      ACCCGCCAGCGCAGC  71 494
LPH40_RS05040 1248457 .. 1248492 -  -3.4  -4.72497   GACTCATCAAGAAAA    TACGTGGATCTCAA-AC AGC GTATTGAAACCCACTCA    ATTGGTGATGGTCTG  69 23
LPH40_RS05025 1246358 .. 1246400 -    -4    -3.922   AAACGGGGAAGTAAA GCACGCTAAGCCAGAAACAG TGT CCGTCTCTTGCTCAGATGGC TTCCCGTATCCGTCT  57 17
        lptD NONE
LPH40_RS05000 1238706 .. 1238720 -  -2.8   -2.9155   GGTTGCAACATGAGA               TCAGTG CTT CATTGA               GGACGGTGACGTGAC  42 11
        pdxA 1237580 .. 1237596 -    -8  -2.67515   GTCATGACCACAGCA              CCAAGC GGGTA GCTTGG              TATCGGCTACTCCTG  58 138
LPH40_RS04945 1220630 .. 1220652 -  -4.1  -3.04054   AAACAACACTACAGA          CACCGGCAGC AATC GC-ACCAGTG           GGCACCAGTACATAA  47 155
LPH40_RS04940 1219174 .. 1219188 -  -5.6  -2.72052   AAATCAATTACAGCA               TGAGCG GGA CGCACA               GATATGGTCTCTTAC  48 37
         alr 1217744 .. 1217758 -  -3.4  -3.53811   CTCACCCTTGTCAAA               CCCGAC ACT GACAGG               TCACACCCACGCCAT  50 366
LPH40_RS04895 NONE
LPH40_RS04890 1205422 .. 1205473 -  -7.5  -2.94416   CACCGCTACCAGAGA CGCTGTGTACATCAGTAT-GGCAGT AGCT ACCACCGACACCGATGGACACA-CG GTCCGCATACGCGTA  59 54
LPH40_RS04885 1203020 .. 1203044 -  -4.9  -4.09685   TCGTATTCCCCAAAA          GATGGCACCCG TCA CACGTGCAATC          ACGACGACAGTCAAC  62 51
LPH40_RS11980 1201160 .. 1201191 - -10.8  -3.58256   GACATTCAAACAACA      CCTTCTGGTTCGGC CATC ACCGAGCCAGATGG       TCGATGTCCGTCTGT  79 235
LPH40_RS04860 1195154 .. 1195180 - -17.4  -3.49102   ACACGTTGCACACAA         CAAAACGGGCCC TAA GGGCCCGTTTTA         TTACGCTGTCATTAG 100 56
LPH40_RS04835 NONE
LPH40_RS04830 1188447 .. 1188473 -  -4.5  -4.81212   CCCATTACAACAAAA        CCAACAGCAGTA CAAA TAC-GCTGTTGC         AACACTTTTCACGTC  73 504
         can 1187291 .. 1187302 -  -2.2  -4.05446   GTTCTGAACCATAAA                CGGT TGCA ACCA                 GTCTGGACGTTGCTG  55 286
LPH40_RS04800 NONE
LPH40_RS04795 NONE
LPH40_RS04790 1176635 .. 1176648 -  -4.5  -3.30124   GCTGATCGTCGACAA               TACGG TCAT CCGCA                ATATCCCGCAGCATC  52 304
LPH40_RS04780 1174218 .. 1174242 -  -2.8  -2.75382   TACTCCAGGCAAGTA          CACTCATTGC ATCCA GGATTGAGTG          CGCTATCCGACTGAA  42 128
LPH40_RS04775 NONE
LPH40_RS04770 NONE
LPH40_RS04765 1173335 .. 1173355 -  -7.5  -3.54543   ATGTAGCCTGGGAAA            CTGACCAGC TTG GCAGGTCAA            TGTCCCGTTTAGTAC  64 132
LPH40_RS04760 1172398 .. 1172414 - -10.1  -2.70143   ATCGGAATTAGAGCA              CCGGCCT TCT AAGCCGG              CGGTTACAGGTTCGA  62 355
LPH40_RS04735 1171044 .. 1171054 -  -3.2   -4.2535   ACATCATATGGAAAA                 CGTC AGC GACA                 CATGCAAACGGCGCG  60 254
LPH40_RS04670 1159560 .. 1159577 -  -6.9  -3.14132   GTGGTCCTCTAGCAA             TGCCGGC GTAC GGCGGCA              TCTGGGTGTGTTTGG  57 60
LPH40_RS04665 NONE
LPH40_RS04660 NONE
LPH40_RS04655 NONE
LPH40_RS04650 1151974 .. 1151986 -  -3.3  -3.54459   CCAACGTTGGTGAAA                CTGGC GCC GCCAC                ACTGGCAAGGGACAT  50 417
LPH40_RS04640 NONE
LPH40_RS04635 NONE
LPH40_RS04630 1150808 .. 1150822 -  -3.5  -5.10933   TCACGGAAAATAAAA               CATGC TACGT GCACG               CAGCGGCTGGCCACC  75 143
LPH40_RS04625 1149762 .. 1149790 -  -9.5  -2.87132   GCGCTGCTGGACATA        TGGCACGCATCCG ATG CAGCCACGTGCCA        TCTGCGTGCTGATGC  63 197
LPH40_RS04610 NONE
LPH40_RS04605 1148338 .. 1148349 -  -7.2  -2.71243   TGGATAGAACAACAG                CGGG TACT CCCG                 TCACATCTGCATATG  56 271
LPH40_RS04595 NONE
LPH40_RS04590 NONE
LPH40_RS04585 NONE
LPH40_RS04580 NONE
LPH40_RS04575 NONE
LPH40_RS04570 NONE
LPH40_RS04565 NONE
LPH40_RS04560 NONE
LPH40_RS04555 NONE
LPH40_RS04550 NONE
LPH40_RS04545 1138739 .. 1138793 -  -6.5  -3.05384   CGCGGTGTGACGCAA CACGATCATGTCATCGATGTCTGAAT GTTC ATCCATCCACCGAGG-CAAGATCGTG CCGCAGCAGACATGC  55 273
LPH40_RS04540 NONE
LPH40_RS04535 1137031 .. 1137047 - -10.1  -3.13522   AGTGCGCCATGAAGA              CAGCAGC GAC GCCGCTG              ATGCGCGAGGCCAGG  73 200
LPH40_RS04530 1136780 .. 1136791 -  -2.2  -2.56715   AGGCCGATCAATCTA                TGAC GCTG GCCA                 GGATGCTGACACGGC  39 6
LPH40_RS04525 NONE
LPH40_RS04520 1134960 .. 1134976 -  -7.9  -3.21924   TGACTGTGGAGAACA              GCAGCGA CAA TCGCAGC              TCTCTGAGTATCTCT  62 494
LPH40_RS04510 NONE
LPH40_RS04505 NONE
LPH40_RS04500 NONE
LPH40_RS04495 NONE
LPH40_RS04490 1121225 .. 1121269 - -10.6  -3.08934   GGATAGACGGCAATA CCCGCACCGGCGCCGC-CCCC TTTA GGGACACGGCACGGGTGCAGC AACACCGCTCACCTC  72 69
LPH40_RS04485 NONE
LPH40_RS04480 NONE
LPH40_RS04475 NONE
LPH40_RS04470 1118348 .. 1118376 - -13.9  -2.75064   GGGCTGATTTAACTA        GCCGCTGGCAACA CCA TATCACCAGCGGC        CTTGATGCTTATCCA  88 34
LPH40_RS04465 1117505 .. 1117526 -  -8.1  -3.08679   TGCTTCGATTCAACA           GCGATGCTTG CAG CAA-CATCGC           ATGCAAGCACCTAAA  60 490
LPH40_RS04455 NONE
LPH40_RS04450 1116658 .. 1116670 -  -3.3  -4.63932   CAGCCTTGAATAAAA                CCCCA GGA TGGGT                ATTCACCGTCACACT  66 127
LPH40_RS04445 NONE
LPH40_RS04440 1115395 .. 1115416 - -10.1  -3.85704   CCACCAATCACTAAA           CCCCAATCG TTCT CGGTTGGGG            TTTTTTTCTTGCCAG  82 367
LPH40_RS04415 1106925 .. 1106939 -  -7.8  -3.74158   TCAATGACATTGAAA               GACGCG ACT CGCATC               GAAATCCCTGCCGGC  68 364
        gltB NONE
LPH40_RS04405 1100436 .. 1100456 -  -8.9  -4.46233   CGAATGGGAAACAAA            CATGCGCCC CAG GGGCTCACG            CGATGCCGGCAACGC  83 133
LPH40_RS04375 1092620 .. 1092630 -  -5.4  -2.94708   GAGTCTGCAAATAAC                 GATC ATT GATC                 CGTGACACACACCCC  51 59
LPH40_RS04370 1090891 .. 1090901 -  -6.8  -3.60296   CACGTTCATCCGAAA                 CAGC ATG GCTG                 TCCACGATCTCCGCA  61 183
LPH40_RS11975 NONE
LPH40_RS04350 1079967 .. 1079981 -  -6.4  -3.14878   CTCTCCAATCCAACA               GAGCAG TTC CTACTC               CACCTTCATATCTGT  57 425
        rhlB NONE
        ftsE NONE
        ftsX NONE
LPH40_RS04320 NONE
         ung 1072022 .. 1072033 -  -2.2  -2.74322   TTTAACTTTTTAAAG                CCCT ATCT AGGA                 TTGCCATGAATCGAT  39 66
        rpoH 1070771 .. 1070791 -  -4.7   -3.7282   CTAGCCTATGAATAA            CACGCTTAT TAA ATAACCGCG            CCATCCCCCCCAAAA  57 298
LPH40_RS04300 1066512 .. 1066527 -  -2.4  -3.67648   ACACAAACAACAACA              CGTACG ACGG CGCTCG               GTTCTGATCATCGAC  50 33
LPH40_RS04295 1065705 .. 1065718 -  -5.3  -2.92175   TTGGAATATATCACA               CTTTC ATCA GAAAG                TAGGGAACCCAAGCC  51 276
LPH40_RS04290 1064214 .. 1064235 -  -3.7  -2.82635   ACGCCGATCAGCATA           GCG-GGTG TCGGCAT CACCGCGC           TGTGACTGGGAATTT  43 39
        sppA 1062207 .. 1062225 -  -6.7  -3.19285   AAAGACAAAAGCAGA            GTCCGGCC CGAA GGCC-GAC             ACACGGAATCCAATC  57 64
LPH40_RS04280 1059494 .. 1059506 -  -4.1  -4.46215   GACATTCAAAAACAA                TCGTC AGT GACAA                CGAAAATTATTCCGT  65 235
         rep 1056611 .. 1056621 -  -6.8  -2.63715   ACCGACTCCACAGTA                 CGCA CGC TGCG                 ATGAGCACCCTTACG  53 209
LPH40_RS04265 1052957 .. 1052972 -  -6.2  -2.61322   ATATTTTCCAAATAT              TGATCA AAGA TGATCA               GCATACATTTCCATG  51 503
LPH40_RS04260 1049239 .. 1049271 - -16.4  -4.55826   TGGAAAATATTAAAA      GCTCACCTGAAGCC TCATC GGCTTCAGGTGAGT      TAAATGCTGATGATC 100 57
        purE NONE
LPH40_RS04235 1042913 .. 1042930 -  -2.7  -3.47349   CCGGGAAACGTACAA             CACCA-TG GGA CACTGGCG             TAGCGCTGCCAGGCA  49 200
        grxD 1041606 .. 1041620 -  -8.5  -3.41839   TATACAGACGTATAA               CCCGG GTCCG CCGGG               GATACTGCGCCAATT  66 493
LPH40_RS04225 1040404 .. 1040431 - -10.6  -2.75993   CGACGGATAGACAAT        CGCCACACTCCA CCAA TGGAGTATGTCG         CGATTGTCAACACGG  71 422
LPH40_RS04220 1039779 .. 1039793 -  -2.8  -3.09648   GAAGAGAGCGCAACA               GCCT CTTCAGC AGGC               GTGAGAATACTCAAG  45 115
LPH40_RS04215 1039266 .. 1039277 -  -4.4  -2.55015   ATCTTAGTCAAGGCA                GCAA AGCA TTGC                 TTTATAAGTCGGTAG  44 27
LPH40_RS04165 1031470 .. 1031498 -  -7.3  -3.29144   TCACTTCCCTGACAA        GACGCGCGCATTC GAG GATTGCGGACGCC        AGCCGACCACGCACA  59 422
LPH40_RS04150 1029893 .. 1029905 -  -6.9  -3.75153   TGGCCGCAAGTCAAA                GCGGC ACT GCCAC                AACTGCGGCACCTGA  63 168
LPH40_RS04140 1028443 .. 1028458 -  -6.8  -3.53444   GTAGCTCCCTTTAAA              GCGTCG CAAG CAACGC               CGCAAACGCCTGCGC  61 5
LPH40_RS11970 1027627 .. 1027644 -  -3.3   -5.0538   CGCGATGGGAAAAAA             CAGCAGC AGAA GCCGCCA              CACGGAGCGCCATGT  75 285
       rlmKL 1024907 .. 1024932 -  -7.5  -3.21395   ACGCCCCGTAGAACA         GCACTGACGCC ACAA GCCACCAGTGC          GATGGTTGCGACCGC  60 491
LPH40_RS04120 NONE
        lolB NONE
        ispE NONE
LPH40_RS04105 1017007 .. 1017019 -  -4.1  -3.49419   CTTTCGTAGAAAAAC                CCAAT GAA ACTGG                CAGGGGCGGTAGGAT  52 23
LPH40_RS04100 1015852 .. 1015865 -  -5.9  -3.97406   TTAAAAGTTGAGAAA               CCGCC TCGC AGCGG                CAGAACGCGACTCTC  66 87
LPH40_RS04095 NONE
         pth NONE
        ychF NONE
LPH40_RS04080 NONE
LPH40_RS04075 NONE
LPH40_RS04070 NONE
         tuf 1011614 .. 1011642 -  -9.5  -4.08557   TTTTTGAAATAACAA        CGGCGAACCGA GGTTCAA CCGGCCCGCCG        TTTGCACGAATCCAA  81 72
LPH40_RS04060 NONE
        secE 1011059 .. 1011069 -  -3.2  -3.31196   TCAAAGCGACAGGAA                 CCAC TGC GTGA                 GCTTCTGTATCACGA  48 0
        nusG 1010367 .. 1010379 -  -4.9  -3.57561   CTTTAATCGTCTAAA                TAAAG ACT CTTTA                TGTGCCAACAAACCC  55 119
        rplK NONE
        rplA 1008948 .. 1008987 - -10.8  -3.98857   CAAGGAAAAAATTAA  GCACTCCACAGACTTAAGC GTT GCCAAAGCC-GTAGAGTGC  ACCTGCGATCTTTGA  87 181
        rplJ NONE
        rplL 1007622 .. 1007648 -  -6.5   -4.4715   CTTCAAGGGATAAAA        GGCCGGGAGTTG ATAT CCAC-CCCAGCC         TTCAATGCATCGTTA  74 68
        rpoB NONE
        rpoC  998756 ..  998778 -  -9.1  -4.35327   GCATTAAAAAGGAAA           GCAGGGAAG TGAGG CTGCCCTGC           CGTTAACCGAACCAG  83 198
        rpsL NONE
        rpsG  997826 ..  997840 -  -4.3  -4.88918   GGAGTGCAAAGAAAA               CTCTT TACTC AAGAG               TCCATAAATCACCAG  74 34
        fusA  995536 ..  995546 -  -4.6  -3.26712   ATTTTTAATAACACA                 GCGC CCA GCAC                 AAGAGCCGTTGTTTA  50 72
         tuf  994220 ..  994248 -  -9.5  -4.08557   TTTTTGAAATAACAA        CGGCGAACCGA GGTTCAA CCGGCCCGCCG        TTTGCACGAATCCAA  81 72
        htpX  991220 ..  991232 -  -4.1  -2.79557   AATTAGCTCAACAAT                GAACC ACG AGTTC                TAATACAAGCAGCCC  45 418
LPH40_RS03985  987370 ..  987401 -   -16  -3.00039   TACGCAGAACTAAAG      GAAACGCCAGAAGC GTGA ACTTCTGGCGTTCC       GAGAACAGTATCTAA 100 53
LPH40_RS03980  985232 ..  985246 -  -8.6  -3.69506   GACGCGAAAAGAATA               GATTGC ACA GCAATC               AAGCAACCCAACACA  71 250
LPH40_RS03975  982973 ..  982985 -  -4.7   -4.1552   CACTGTCGCAACAAA                GCCGC TTT GCTGC                TGCACTTGGCAAGCC  61 332
LPH40_RS03960  981461 ..  981486 - -11.1  -4.36262   ATACCGACATGAAAA         GAGCCGAGATC GCAC GTTCCCGGCTC          TTAGGGTGACCGAAA  91 59
LPH40_RS03950  977191 ..  977205 -  -6.4  -3.47762   AACATTGATCAAACA               CACTGT TAC ACAGCG               CCACCCAAATAAAGC  61 140
LPH40_RS03945  976035 ..  976049 -  -7.2  -3.88884   GTAATGAAACAAACA               TGATCT ACC AGATCA               AAAGCGACGTACAAG  69 382
LPH40_RS03935  970908 ..  970927 -  -2.7  -3.86202   CTGGATCAGACTAAA            GACGGTC TAACGC GGCCGCC             AAGTCCTCCGCCAAC  54 1
LPH40_RS03915  968362 ..  968394 -  -7.7  -3.07994   TGCAACGGCATTCAA      TCCACCCAGCCATAT GGC AAACGACTAGGCGGA      TAGAGAATTAACCAG  60 107
LPH40_RS03910  966366 ..  966380 -  -4.2    -3.214   CTCACCACAGCAAGA               TCGTTC TTC GACCGA               ATCTACATCCATATA  48 515
LPH40_RS03890  961851 ..  961876 -  -2.6   -4.3953   TCTAACTAGAATAAA         TCCCACAACA CGTGTT TGTTGTGACA          CAGACTCGTCAATCT  62 336
LPH40_RS03875  957731 ..  957744 -  -3.8  -2.57541   ATCGACAATCAAGAC               GCGT TTTTGC ACGC                TCAGGTACCGCCTTA  44 105
        phoB  956997 ..  957038 -  -4.5  -3.23899   CTTGAACCAAGCTAA CCGAATACGGTGGAGTGTGG AGA CGATACTC-ACGGTATTCGA CGGGATACTCAGATC  50 40
        phoR  955586 ..  955597 -  -7.2  -3.66727   GAATTAGACATAGAA                CGCC TTGG GGCG                 AAAGATATAGGAAGA  67 114
        ppk1 NONE
         ppx  951729 ..  951766 -  -7.2  -3.65522   GACTGATTCGAACAA  CTGAC-TCTCTGCCCATG CCCG CATGG-CAGATACGTCAG   AAATCTCGCTCGCAC  67 149
        lpxH  949785 ..  949797 -  -4.1  -3.69364   ATTCAACACAGATAA                CCAAA ATA TTCGG                CAACGATAACCGCGT  55 260
LPH40_RS03830  945593 ..  945611 - -13.2  -2.73799   TGTATAAACAATGCA             CGCAGATG ATG CATCTGCG             CACTGGTATTTTCTG  84 139
        rpsB  941192 ..  941205 -  -8.1  -2.81464   CCACCAGGGAGGACA               GGCGA GAAT TCGCC                AGTCCTTATTATGTA  59 148
         tsf  940207 ..  940224 - -10.5  -4.07306   ACACGGAATTACAAA             GCGGCGG CATA CCACCGC              TCCTCGGAACAAACA  85 58
        ispG NONE
LPH40_RS03785  935340 ..  935350 -  -3.2  -3.55122   TACGATTCAAATCAA                 GCAA CTC TCGC                 ACCTTGATCCACCAG  50 413
LPH40_RS03745  926772 ..  926795 - -14.6  -2.90212   TGATTAGGGCAGACA          GCTCC-CCGGC AAC GCCGGTGGAGC          AAGGGCTCCCCGCCA  90 185
        rpsF NONE
        rpsR NONE
        rplI  925401 ..  925430 - -14.3  -5.01845   GACAACAACGAAAAA       TGCGACGGGCGCT TTGA AGCGCCCGTCAGA        CACGATGGAGGCAAC 100 46
         smc NONE
        zipA  920736 ..  920751 -  -4.6  -3.72909   TCAAGCAACACAGAA              GCCTGA GTGA TCCGGC               TGATGAGACATAGGG  57 216
LPH40_RS03715  920350 ..  920362 -  -4.8  -3.82031   TCAATCACCAGGAAA                CGCT TTGAT AGCG                TGCTTGCCAATCAGG  59 108
        ligA NONE
LPH40_RS03705 NONE
        epmA  915667 ..  915677 -  -8.2  -3.18467   AAACGTCCAAGTCAA                 GCGG CAC CCGC                 GCAGATCAGGATTCC  64 106
LPH40_RS03695 NONE
        mtnA  913490 ..  913502 -  -3.3  -2.64144   CCGTCATGTAAAGAG                GCGCT ACA AGCTC                GCAAGCAACCGCTGT  42 191
        gyrA  910719 ..  910732 -  -9.5  -2.78384   GCGGGGCTCAGGACA               CCGGC ACAT GCCGG                TGTCCTCATGGACTT  68 40
LPH40_RS03680  908006 ..  908038 -  -4.8  -3.14132   TGCGGTCTGGATGAA     GCCAGACCTCGCCAC ACTG ATAGCG-GGTCCGTC      AATGCGATGCGGGCG  50 24
LPH40_RS03675 NONE
LPH40_RS03670 NONE
LPH40_RS03665 NONE
LPH40_RS03660 NONE
LPH40_RS03655  893396 ..  893408 -  -4.1  -4.61852   AACACGACAAACAAA                GTCAA CGT CTGAC                CTACCCAAGAAGGCT  68 385
LPH40_RS03610  883723 ..  883734 -  -5.8   -4.3014   AGACACCCACCAAAA                CCGA AATC TCGG                 GCCTGATCGAACGCA  69 522
LPH40_RS03590  880687 ..  880701 -  -6.4  -3.20991   CCGAACGCAATGCAA               GGCTAT CAA ACAGCC               AAGTCACGTAATTTC  57 16
LPH40_RS03585  880158 ..  880173 -    -4  -3.96224   TAAAGCACCTACAAA              TGGCATG CAT CA-GCCA              TAGATATCCAGCCGT  57 73
LPH40_RS03580  877671 ..  877689 - -13.2   -3.2218   CTCAAGAGCTATCAA             CGCATCTG CTC CAGATGCG             AGACACTCGCTGCCA  88 352
LPH40_RS03575 NONE
        feoB NONE
LPH40_RS03565  873233 ..  873244 -  -2.2  -3.76775   TTCAATACACTGAAA                CACT CTGG AGCG                 GACATCACCTGATGA  50 289
        rluD  870381 ..  870398 -  -4.1  -3.10715   GGCATTAGCACCCAA             GATGGAA GCGT CCCCATC              TCAGCGTCACTCCCG  48 32
        pgeF  869375 ..  869392 -  -9.1  -2.73969   ATCCATTAAAGCAAC             GGCGCCA ATGC TAGCGCC              CCTCATGACTGACAA  63 248
LPH40_RS03545  868525 ..  868551 - -14.4  -3.64283   CAAACGCTCTAACAA         CGGCCCGCTGGA GCG TCCAGCGGGTCA         TCATCCAGATACAAA  95 175
LPH40_RS03530 NONE
LPH40_RS03525 NONE
        nrdR  861373 ..  861385 -  -2.6  -3.74251   CATATCCCCATCAAA                GCAG GTAAG CCGC                TCGACTTCGGCCAAA  51 109
LPH40_RS03515 NONE
        ribD  859692 ..  859708 -  -5.1  -3.76641   ATGCCAATATGGAAA              TAGCACA TTG CGTGCCA              GCCGATACAACACTC  59 292
LPH40_RS03505 NONE
        ribB  857560 ..  857578 -  -2.3  -3.25479   TGAGGAAACATTTAA             TCGACAC GCTGG GGGCCGA             CCGGAGCCTGGCCGC  43 3
        ribH NONE
        nusB  856546 ..  856557 -  -7.2  -3.06991   TAGTACGGGGAAAAT                CCGC CTTT GCGG                 GTCGCTGCTACGCGC  59 62
        thiL  855061 ..  855094 -  -4.5  -3.79874   TGTCAGAGAACAGAA     CGCTG-CACAGACATC GTG GATGAATGTGACGGCG     TCAGCCCGGTGCTGG  59 467
LPH40_RS03480  853722 ..  853749 -  -7.1  -2.81547   TCCGGATATCAATGA       CCAGG-GCACTCA TGCT TGAG-GCACCTGG        ACTTGGAGGTCAACC  57 7
LPH40_RS11960  853217 ..  853235 -  -6.7  -2.80816   TGGCGATCGACGACA             GAGTCCA GGAAT CGGACTC             AATGCCTTGGCTACC  54 188
LPH40_RS03470  852352 ..  852363 -  -5.8  -3.61589   GGAATAGGAAACGAA                GCAG TACA CTGC                 TCACCACTGTCGTTA  59 268
        dapA NONE
LPH40_RS03445  847487 ..  847518 -  -8.6  -3.57106   CTTAAGCCAAAGCAA      GACGATGCCCCAGA ATTT CCGGGGGCATTGCC       ATTTATCTTATGATC  69 92
        uvrB  844130 ..  844142 -  -4.7  -4.04023   ACTAAGTAACAACAA                GCTCG CCG CGTGC                AGAAAAATGCTTGAC  62 49
LPH40_RS03430  843453 ..  843487 -  -3.6  -4.98857   ACTCAATGACAAAAA     GATCAAATACGGCAGT ACA ACTGCTATATTGCATC     CATGCACTGAGGAAC  73 520
LPH40_RS03425  842594 ..  842607 -  -5.3  -3.20901   ACTGTAGCAATCTAA               CACTT ATTA AAGTG                TCTTAATAGACGATT  52 309
LPH40_RS03415  838639 ..  838658 -   -15  -5.42975   CGACACAAACAAAAA            CCCCGGTC TAAT GACCGGGG             TTTTGCGGGTCTAGC 100 50
LPH40_RS03390  825241 ..  825255 -  -3.5  -3.08187   AAATATGGCATCGAA               CGCTC CGTAT GAGCA               GTGCATGCTTGAAAG  45 159
LPH40_RS03385 NONE
        recG  822164 ..  822179 -  -5.4  -3.63805   ACTGTACAGCTCAAA              GCACGT GGCC ACATGC               TTCATCAACCCGATA  59 406
LPH40_RS03375  820173 ..  820197 -  -2.7  -4.64766   CTCATAGCTCAAAAA          GTTGCGTTGAC ATG GTCTCTGCAAC          TTCTCTCAGGTTAAT  65 81
LPH40_RS03335 NONE
LPH40_RS03325  803951 ..  803971 -  -3.9  -3.75657   GCAAAGATGCAAGAA            GCACATGCA ATG CACAGGTGC            GGTTCTTTCTGGTCA  55 352
LPH40_RS03305 NONE
LPH40_RS03300  797065 ..  797075 -  -5.4  -3.04398   GCGGGGTTTCAAAAG                 TACC AGC GGTA                 TAGGTGATTTTTTAG  51 53
LPH40_RS03280  788767 ..  788778 -  -3.6  -3.82083   GCAGCACAAGTCAAA                CGCC AGCA GGCA                 GGCTTGGTGCCTGTA  55 267
LPH40_RS03275  788007 ..  788030 -  -4.6  -3.14564   TTACGCGCGGAGCAA          GCACAGGCGCT GCT AGCA-CTATGC          CGTCCAGCCGGTGTG  47 504
LPH40_RS03265  787393 ..  787404 -  -5.8  -4.69415   ATCAACACAAACAAA                CCTG CAAT CAGG                 GCATCAGTCATTGAC  78 212
        clpB  784241 ..  784260 -  -3.7  -4.16921   CAACAATCGGTAAAA            GTTATTT TGGTTG AAATAAC             CACACTCTTTGGGCA  60 81
LPH40_RS03240  780481 ..  780504 - -13.8   -5.1356   TCTGACTAATAAAAA          GCGGCGCCCC TTGC GGGACGCCAC           TCTGAAAAACACACC 100 105
        dusA NONE
LPH40_RS03230 NONE
LPH40_RS03225 NONE
LPH40_RS03220  773003 ..  773018 -    -4  -4.41348   TGCCTGTGAAATAAA              TCAGAC TTCG ATCTGA               CAAAATACATGACAT  65 440
LPH40_RS03215  771992 ..  772009 -  -5.5   -3.6869   GAGATCAATGCCAAA             GATGAGG ATAA CCTCAAC              ACAAGAAAGAGTAGA  59 203
        metK  768456 ..  768468 -  -4.9  -3.97709   ACTAGCGAAGAATAA                TTGAA CAT TTCAA                CCTAATACCCTCCCC  62 151
LPH40_RS03190  766780 ..  766792 -  -2.7  -3.21934   TCTCCGGTAGAAAAT                TACAA GTA CTGTA                GCTTTCCTGATCTAC  45 73
         bfr  766054 ..  766067 -  -5.9  -3.73775   CGCAGCTGCAGGAAA               GCGCC ACAA GGCAC                GAAACTAATCTACTG  61 246
LPH40_RS03165 NONE
LPH40_RS03160 NONE
        erpA  759413 ..  759428 -  -6.2  -3.72642   AATGAATGAGGCAAA              TTGATG GATG CATCAA               GCACAAACGCGACAC  61 373
LPH40_RS03135  751792 ..  751815 -    -3  -3.72576   TGCGTCTGGACGAAA          TCGCCGCGCT GGCT AACGCGGGCA           CGCTGGCCGCGTTCA  53 524
LPH40_RS03115  748086 ..  748099 -  -5.3  -3.48395   AGGGGTGTCAGACAA               GTTCA TTGA TGAAC                TCCAGTCGAAAGCAG  56 49
LPH40_RS03110  746706 ..  746724 -  -8.2  -3.55487   TGACAGCAAGCAGAA             CATCATGC ATC ACATGATG             CCGGGCTCACTCAAC  69 91
LPH40_RS03105  744779 ..  744789 -  -6.8  -3.84887   ATAAAAGTCATTAAA                 TCGG AAA CCGA                 GCACCTTCAAGCCAA  66 276
        recC NONE
LPH40_RS03065 NONE
        recD  730520 ..  730534 -  -4.2  -3.68908   AAACATCCACGCAAA               GATCGA TGC TCGCTC               ATGCCCCACACCTGA  55 352
LPH40_RS03055  728641 ..  728651 -  -4.6  -3.99327   CACCCATCAAAAACA                 CCGC ACC GCAG                 GCACCTTTTCCACTT  62 201
LPH40_RS03050  728161 ..  728173 -  -6.9  -3.57561   CGTGAACTTCTGAAA                GCGCG CGC CACGC                TGCGGTGAAACACCC  61 142
        tsaD  722915 ..  722925 -  -5.4   -5.3104   TTAGGAAAAATAAAA                 CACT CAG AGTG                 CAGAAAACGGTTTCA  85 62
        folB  722499 ..  722521 -  -4.8  -3.16683   ACTGGATTGCAGCAA           CGTCAGCATC CAA GATGCTCACC           ACACTTAAGCGGCCT  50 30
LPH40_RS03015  720727 ..  720741 -  -2.1  -4.46976   ACTAACAAAGATAAA               CAGAT CAAAC ACCTG               TATGTCTCGCTGCAC  61 281
LPH40_RS03010  718188 ..  718204 -  -2.2  -3.01329   CCATACAGTAAATCA              GGCCCT CCCCT AGAACC              TAGGCATCAATCCAA  42 83
LPH40_RS03005  717614 ..  717639 -  -6.2  -3.13728   AGCATTGACATCGAA         TCGCTCATCA TTCCCG TGATGAGCCA          ATACCACTCCACACT  55 190
LPH40_RS03000  716616 ..  716626 -  -3.2  -4.56607   GTACTAAGGACAAAA                 CGTG CGG CACA                 CTTCAACCTGTGTTA  66 285
LPH40_RS02980  713382 ..  713395 -  -6.7  -4.22346   CAAACGCATCGAAAA               GCTTC CCAA GAAGC                AGAAATCCCATATTC  71 98
LPH40_RS02975  711454 ..  711466 -  -4.1  -3.14463   AAGCGCGTTTAGTAA                CAACA CTG TGCTG                TTTCTGAGCAGCTTT  48 240
LPH40_RS02965  709536 ..  709546 -  -8.2  -4.57882   TGCAAGAACAACAAA                 CCGC CAA GCGG                 CATCACAACATCACT  83 36
        hflK NONE
LPH40_RS02945 NONE
LPH40_RS02940  704134 ..  704170 - -13.7  -4.33105   GAAGCATCATCAAAA    CACCTCAGACACCGCGA TGA TCGCGATGTCTGGGAAG    TAACATTAGCCATAC 100 115
LPH40_RS02935  702380 ..  702395 -    -9  -4.19953   TATTTAATCTCAAAA              GCTGCA CTGC TGCAGC               TTGACGAAGAACAGC  80 374
         ndk NONE
        rlmN NONE
        pilW  695163 ..  695184 -  -5.1  -2.51872   CTGATCACAATACAT           TAGCCCCTGG GTT CC-GCGGCTA           CATTTTCGGGAAACT  48 3
LPH40_RS02910  694226 ..  694242 - -10.1   -3.5944   ATCGATATCCTCAAA              CCCACCG TTC CAGTGGG              ACCTATTTAATTTAA  77 72
LPH40_RS02905  693580 ..  693595 -  -3.2  -2.78798   ATCTCTCATTTAAAT              CGGATCC ACA GG-CCCG              GGCACCAGGCCTCCC  43 4
        bamB NONE
         der NONE
LPH40_RS02880  683794 ..  683826 -  -5.6  -3.78934   CTGTTCCTAGAAGAA     CGTTGCACGCCGT TTTACCTC ACGGCGTGC-ATG      ACAACCAGGTTCACA  59 192
        ppnN  681018 ..  681032 -  -5.6  -3.54919   AACTATCGCTGTAAA               GCAGAC ACT GTCAGC               ACATTACAGAGCAAA  56 112
LPH40_RS02870  680414 ..  680467 -  -2.9  -3.95584   CTTCGATCAACGAAA CTCCAAGCGGACGCACAGACCACTG CCAA CAACGGTTTGAGCGCCCTCTCATTG GCACACACCCTTGTC  54 20
        pilV NONE
LPH40_RS02860 NONE
LPH40_RS02855 NONE
LPH40_RS02850 NONE
LPH40_RS02845  673204 ..  673229 -  -8.4  -2.81281   TCAGCTAAAAGCAAT         TCCTGAGTGCT TTACC AGCACTC-GGA         TAATTGGCCTTGACT  62 11
LPH40_RS02840  672990 ..  673017 - -11.4  -4.41633   CACGCGGAAAAACAA        CAAGGGCCTTCA TCTC TGAAAACCCTTG         CATTTAAAGCAATTC  93 42
LPH40_RS02835 NONE
LPH40_RS02830 NONE
LPH40_RS11955  671934 ..  671946 -  -4.7  -2.93382   CGTTACAGGTACAGA                CGGCC TAG GGCCT                GCCCAACCCACATCC  49 151
LPH40_RS02825  670585 ..  670601 -  -5.2  -3.36648   TAAGACAGGCTAGAA              GTTATC GCTGA GATAAC              GGCTAATAAAAATAG  54 3
LPH40_RS02820  670066 ..  670083 -  -8.4  -2.73441   CATCATGTGGCAAAT             CGCTGG CAACGT CCAGCG              GGGTGAGGCAGTAAG  61 61
LPH40_RS02815  669180 ..  669204 - -11.6     -3.24   AAATTAAGCCAGCAA          TATAGCCTCA CGTTC TGAGGCTATA          GACATCACTGCCGAC  79 483
LPH40_RS02810  667634 ..  667660 - -16.6  -3.58037   GATTAATCTTCCAAA         GCGTAAGGGGCC AAA GGCCCCCTACAC         CCTCACTCAGAATAC 100 40
LPH40_RS02800  666693 ..  666710 -  -9.1  -5.37865   CCAAGAATGAAAAAA             CCCCGCA TCGC TGCGAGG              CCTGCTTTTAAGCTG 100 382
LPH40_RS02795  666180 ..  666210 -  -8.8  -2.85351   CTTCCGTACAGTACA       CGCCGCTACGGCAC ATG GATCCGCAGCGGTG       GCTAAGAGAGTTTGG  62 27
LPH40_RS02790  665079 ..  665092 -  -3.1  -4.07568   GCCCCGGTTCGAAAA               CG-CCT CCA AGGACG               CCATGAGTGGTATGT  56 490
LPH40_RS02775  661703 ..  661716 -  -3.8  -3.79849   CAAGCACAGCAACAA               CTGC AGAAGA GCAG                GAAACAGCCATCCCC  55 439
LPH40_RS02755 NONE
LPH40_RS02750  652443 ..  652470 -  -9.8  -3.09878   GGTAGCCATTCAACA        CCGCCCCAGCATG GCA CTTAC-GGGGCGG        CTGTGGAAAATGCGA  70 173
        rsgA  651159 ..  651175 -  -2.3  -4.82678   CTACAAAAATTAAAA              CAATTCA ACC TGAATTC              GAAGGAACGTCAGGG  67 53
LPH40_RS02735  647702 ..  647712 -  -3.2  -3.90586   ATACCATGCCATAAA                 GATG CAG CACC                 CTGGAGCAATTATCA  55 234
LPH40_RS02730  646567 ..  646587 -  -2.5  -3.51232   GTTGGGTCAAACCAA            CGCAACT GCGTGAA AGCCGCG            GTTATGCGATCGTTG  46 238
        hemH  643191 ..  643204 -  -5.3  -4.19735   GTGCTGAAAAGTAAA               CATTG CCTA CAATG                CACTGCACCAAACTC  66 66
         tmk  633103 ..  633121 -  -4.6   -2.6927   ACCCGGCAGACACCA             CATGGT GCCAGCA ACCATG             CAAGCAAGCAGATGT  46 416
LPH40_RS02650 NONE
LPH40_RS02645 NONE
         hda  626270 ..  626284 -  -4.2  -2.58544   GGCTACGGTCACAAG               CCGCCT CCT AGACAG               ATTACAAAATGTTCG  44 121
LPH40_RS02620  622262 ..  622276 -  -4.2  -2.52464   TGCCTCCTCAAGGCA               TCTTGC CTA GCAAGG               TAACGGCCACACATC  44 73
LPH40_RS02580 NONE
LPH40_RS02575  612034 ..  612053 -  -3.5  -3.19602   GTGGGCAGAGTAATA            GTGCAGT AACGGG ACAGCAC             TGACCGGTGTATTCA  46 81
LPH40_RS02570  611505 ..  611521 -  -2.2  -3.96705   GCGAGAAAAGCCAAA              GGAGAA AGCAA TTCACC              GCTCGCTGCAAGATG  55 66
LPH40_RS02565 NONE
LPH40_RS02560 NONE
LPH40_RS02555 NONE
         gmd  604713 ..  604726 -  -3.1  -3.84406   CGCTTACCAGAAGAA               CTCAT TAGA ACGAG                AAATCACGTTCGCTG  54 16
LPH40_RS02545  603751 ..  603762 -  -2.2  -3.52192   TGCAACTTGACAGAA                CCCA AGTC TGGA                 TTTCGCAAGACACAA  47 66
LPH40_RS02540 NONE
LPH40_RS02535 NONE
LPH40_RS02530 NONE
LPH40_RS02525 NONE
LPH40_RS02520  598489 ..  598505 -  -7.3  -5.13473   ACTACACTGAAAAAA              TTGACCG TTT CAGTCAA              ACAAATTAGAGTGCA  88 187
LPH40_RS02505  594478 ..  594488 -  -3.2  -3.05536   AAATCATTGCCAACA                 CACA GAG TGCG                 GCTAAACGATGTAAG  45 45
LPH40_RS02500  592071 ..  592087 -  -2.9  -3.97636   AGCCGAACTCATAAA              CAATGCG ATT CGGACTG              CCCATCAATTCCAGG  56 155
LPH40_RS02495  591605 ..  591618 -  -2.4  -2.59569   GCTTGAAATCAACAG               TGGT GTAGAA ACCA                GTCTAGTCTTCTAAA  39 28
LPH40_RS02490  590837 ..  590847 -  -3.2  -3.91281   CGATACAAAAAGTAA                 GCCT CCC AGAC                 AAGGAGAAAGCAGAC  55 251
LPH40_RS02485  589299 ..  589330 -    -3  -4.69214   TACCGAATAAACAAA      CAGGGATTGATACT CAAG AGTACCAACACCCA       TGAGCATTGACTGCT  68 351
        aroE  585489 ..  585499 -  -3.2  -3.24456   AGAGATCATCAGCAA                 CACT AAA AGCG                 CGCCTATTCTTCAGT  46 36
LPH40_RS11950  584861 ..  584889 - -10.2  -3.05463   ACGTCCCCCAGCCAA        CAGCCCCGGCAC GTACG GTGCCGTCGCTG        ATCCAGTTCAGTAGA  72 324
LPH40_RS02470  584194 ..  584209 -  -3.9  -3.53012   GCTGCCGGTGCCAAA              GGGCG CGTTGC CACCC               AAGAAGGCAGTTGAT  52 133
LPH40_RS02465 NONE
LPH40_RS11945  583370 ..  583395 -  -6.9  -4.65895   TTGGTCAGTCAAAAA         CAAACCC-GCCA CGG TGGATGGGTTTG         CGGTCGGTGTTGCTT  77 71
LPH40_RS02440  578729 ..  578744 -  -3.2  -2.90392   GATTGCCGAACTATA              CCGG GTCATGCT CCGG               GAATATCCGGGGGCT  43 168
LPH40_RS02435 NONE
         nth  577226 ..  577239 -  -6.7  -3.21416   CATGCCTATGAGGAA               GCATG GAGT CATGC                AATCTGACGCCAATG  57 431
LPH40_RS02425  576517 ..  576532 - -10.4   -2.7898   CGCAACACGGAAGCA              GCCTCG GCTG CGAGGC               AATCGCTGCAAGTAC  71 411
LPH40_RS02410  573452 ..  573466 -  -5.6  -3.63305   GATACAACTTTCAAA               CAGCGC TTG GCACCG               ATGGTTAGATGGTTA  59 243
LPH40_RS02395  570772 ..  570786 -  -7.8  -2.70525   CTGTTCGAAAGTAAG               GGAGCA TAA TGCCCC               GGTCCAGGCTGTATA  58 94
LPH40_RS02390  569895 ..  569911 -  -2.2  -5.04597   ACTTATAGAGAAAAA              GTGCAT TCAAG ATGCTC              ACTCTCCCTCAATCG  73 67
        tilS  564862 ..  564874 -  -3.4  -2.71712   CGGGGCTGGTCAAAT                CAAC GTGTT GTTG                TTGGATTCCCAACGC  42 7
LPH40_RS02370 NONE
LPH40_RS02365  563677 ..  563700 -  -3.8  -3.41708   TTAACGAAAATCCAA          GACCACGCCTC AGT GAG-CGCGTTC          TACAGCCACGCGCGC  50 11
LPH40_RS02360 NONE
LPH40_RS02355  562554 ..  562564 -    -4  -2.72344   CCGTATTCCGAATTA                 GTAT GGA ATAC                 TGTTTGTTGTATTCT  44 152
LPH40_RS02350 NONE
LPH40_RS02345  561657 ..  561670 -  -3.7  -4.08767   GTCATCGTGGTAAAA               GCGGC TGAG GCCTC                ATGGCAGGTGGTTGG  58 24
LPH40_RS02340  560762 ..  560775 -  -3.9  -2.81547   TGCGGACATCAATTA               TTCAA TTAA TTGAA                TGTGGGCTGCTTGCT  45 204
LPH40_RS02335 NONE
LPH40_RS02330  559859 ..  559870 -  -4.4  -3.72893   TAGTCCCTCATCAAA                GCAA TGAT TTGC                 TGTAGCTGCACGATG  55 127
LPH40_RS02325 NONE
LPH40_RS02320 NONE
LPH40_RS02315  558353 ..  558365 -  -4.9    -3.965   CCCCAAAACCAAGAA                CAAAA TAA TTTTG                ACCTCGACGAGTGGC  62 101
LPH40_RS02310  555479 ..  555498 - -16.4  -4.36931   GAAGCCATACCAAAA            GGCCCCGC ATCT GCGGGGCC             TCCCAGTACACAACA 100 46
        prmB NONE
        aroC NONE
LPH40_RS02290  552564 ..  552586 -  -7.6  -2.50994   TGCAATCGGAGCAAT           GCAGCAAACG TCC CGTATGCAGC           CCACACCTCAAGGAC  57 33
LPH40_RS02285  551058 ..  551070 -  -6.2  -3.76169   TGAACACCAATATAA                CCGG TGTAG CCGG                AATTCTGAATCCAAC  61 147
LPH40_RS02280  549248 ..  549260 -  -9.1  -2.53876   CGGGACCTCAACCGA                CAGGC ATC GCCTG                TTTATGCAATTTGGT  63 27
        truA  548454 ..  548471 -  -4.1  -3.92373   GAGGCGATTCATAAA             CTCACCT CGGT AGGCAAG              CACCACTTTGCCGGA  57 1
LPH40_RS02270  547766 ..  547778 -  -3.3  -3.87551   ATGACGAAACGTAAA                TGCGG TAT CCCCA                GCAGGCCACTCAAAA  55 35
        trpB NONE
        trpA  544869 ..  544883 -  -8.5  -4.69324   ACAAGAAACAATAAA               GGGCC CTATT GGCCC               GACAGTGACACTGAT  88 340
LPH40_RS02255  543854 ..  543872 -    -3  -3.93236   GACCAACTCCAGAAA             GGCCGCTG CAC CATCAACC             ATCGGGATCATGAAA  54 205
LPH40_RS02240  541127 ..  541139 -  -7.7  -3.28873   ATGCATCAAAAAGGA                CGATG GCA CATCG                CAATAATCGCAATAC  64 61
LPH40_RS02230  540188 ..  540203 - -10.4  -2.63102   ACTATGGCGACACCA              GCGGCA TACC TGCCGC               AACCACTGATAAAAG  64 445
LPH40_RS02210  532559 ..  532588 -  -7.1  -3.64716   GGACGGCCCAAAACA       CACAGGCAC-GCGA CTT CCGCTACGCCTGCG       GCATCCGTTATGCGT  60 252
        gcvP  527560 ..  527576 -  -7.3  -3.12999   GTAGCGGATATGCAA              TGTGACA AAT TGCCACA              TTAAGCAACGCCATA  60 333
LPH40_RS02170  520205 ..  520217 -  -4.8  -3.78597   ACGCATCAATGGAAA                CGCT TACCG AGCG                TGCACATGCATTCTC  57 140
LPH40_RS02130  511715 ..  511736 -  -2.4  -3.72009   AGAACACCATGCAAA           TTGAT-AGC ACCCG GCTCATCAA           ACATAGCAAGACGTC  50 22
LPH40_RS02125  509145 ..  509173 -  -9.6  -3.52539   CAAGTCCAACGACAA       CACA-GCGCCTCG AAAT CTAGGCGCATGTG        TCATTTATCCCAAGC  74 170
        murA  493763 ..  493779 -  -2.1  -3.03243   AGCGACTTTGCAAGA              TCATGCG ATA CGCCGGA              TCGAGGCACCCAGCG  42 9
LPH40_RS02040  492992 ..  493034 -  -8.4   -3.9693   GACTTACTCAAATAA CGCGCGGTGTATTGCCCCTT TAC AAAAAGCATCACACCGCAAG CAGCAGCCATGAACC  76 449
LPH40_RS02015  484021 ..  484032 -    -3  -2.87463   AACCTCCCTTACACA                TGAT TGGT ATCA                 GCTACGGGAACGTGA  42 23
LPH40_RS02010  483777 ..  483801 -  -6.4  -2.60075   CCCTTCTCAATCAAT          CACAGCCGAA CCATT TTCGGATGCG          TTCTACACAACATGC  53 108
LPH40_RS11940  480545 ..  480582 -  -5.6    -3.551   CCCTAACCTACAGAA   TTCAGCACATGTTCAT CTTTAT ATGGGCATGGGCTGAA    TTGCAACATCATCAG  56 337
LPH40_RS01995  479730 ..  479740 -  -3.2  -3.53012   GCGGGTCTGGCCAAA                 GCCA GCT TGAC                 GGTGATCATGATACG  50 58
LPH40_RS01990 NONE
LPH40_RS01985  478000 ..  478016 -  -4.4  -3.63782   GAAGATGACCCGAAA              GCCGAT TTGGC ATCAGC              AAGCTGACGCCCTCG  55 151
        clpS  473927 ..  473941 -  -4.3  -3.14136   GCACCAACCATGCAA               TCCAA GTAGA TTGGA               ATTAGGGATTTATGC  48 35
        clpA NONE
LPH40_RS01930  464912 ..  464937 -    -4  -3.86822   CAAGGGTGCCATAAA         CACCTGATTT AATGGA AACCCAGGTG          AGAATTAAATAACTT  57 54
LPH40_RS01925  462701 ..  462722 -  -8.7  -2.87211   ACGCTCGGCTATACA           GTGCATCAC ATCA GCGACGCAC            GCTTCTTAAGCCAGG  62 201
LPH40_RS01920 NONE
        lolA  460807 ..  460819 -  -3.3  -3.15544   TTGTATCGTGAGCAA                GACGA AGG TCGGC                ACGTACAGGCGAATA  46 156
LPH40_RS01910  459295 ..  459316 -  -4.4  -3.17486   AACAATGCGGAGGAA           GATGATGG CAATTT CCAGCATC            ACATTCTCCAATTGG  48 127
        crcB  458804 ..  458824 -  -3.9  -2.69799   TGATCGCACATATCA            GCATGCACC AAG GCTCCATGC            CACGCCAACGCTCAA  44 44
LPH40_RS01900  457952 ..  457964 -  -6.3  -2.94099   CGTGGTGACCACATA                CCATT CCC AATGG                TCCATTAGGCGGGCC  55 403
LPH40_RS01895  456922 ..  456935 -  -2.3  -4.55287   TCTATCTATACAAAA               CTGTG ACAT CACTG                AATTGAGTGCATCAT  63 215
LPH40_RS01890  454901 ..  454915 -  -6.4  -3.48063   TACCTAAACTCAGAA               GCACGA TGG TCATGC               AGTATTCGCGCCTGT  61 156
LPH40_RS01875  452511 ..  452527 -  -2.1  -4.00868   TGATCCACAAGCAAA              GCCACAG CAT CGGTCGC              GAACGCGGTCTCCAT  55 48
LPH40_RS01870  451756 ..  451784 -  -7.4   -3.1247   ACCCGGGATACTCAA        TCTGTACCACGC ACTGG GCGCGATACAGG        ACGTCCCCCGTACCT  57 390
        gluP  448729 ..  448743 -  -4.2  -3.18118   GCAGTCGACAATATA               GACACA CGC CGCGTC               GCCCGGATCCGCGGT  48 483
LPH40_RS01845 NONE
        nagA  445682 ..  445703 -  -4.5  -3.80625   GTCCGACAATCCAAA           GTGCATCCTC GAA AAGGAT-CAC           AGCACGATAGATCTG  57 269
LPH40_RS01830  444741 ..  444758 -  -4.1  -3.74626   AGCAAACCATCCAAA             GATGGCA GCCA TGACATC              AATCAATACAAAACC  55 28
LPH40_RS01825  444343 ..  444371 -  -6.7  -3.76224   TGTTGATCTATCAAA        CAGCATCGAGTGA GTT TCACTTAAAGCTG        TAAGCTCCTCCACAC  63 113
        accD NONE
        glmM  441959 ..  441971 -  -4.7  -5.18297   CAACAAGAAATAAAA                CGCGG CGG CCTCG                CCTGCTACAACAAAC  83 48
LPH40_RS01770  431847 ..  431859 -  -9.1  -3.38415   TGAAGCACAAATACA                CCAGG ATG CCTGG                TCAACACATTGACCC  69 488
LPH40_RS01765  428708 ..  428720 -  -4.1  -3.31365   CACCACAGTACAATA                GATAC GAA GCATC                GCAAGAGCACCATCC  50 47
LPH40_RS01760 NONE
        dapF NONE
LPH40_RS01750 NONE
        xerC  425567 ..  425584 -  -6.3  -3.28173   ACCACAAGACGAATA             GTGATTG AGAA CAACCAC              GAGTAGGATCTTAGA  59 440
        hslV  423013 ..  423025 -    -2  -3.17146   CTGGCTTAGAAGACA                TAGA TAAAC TCTA                GATTGCGGCCGCAGC  43 80
        hslU  421546 ..  421556 -  -3.2  -3.55084   GCCGAATACCAAACA                 CCAC GGA GTAG                 CAATACACCTGACCG  50 109
        ubiE  418788 ..  418806 -  -9.6  -3.35996   CAGTGGCACTGACAA             GTCTCTAG AAT CCAGAGAC             AGATAATACGTTCCG  73 132
LPH40_RS01715 NONE
LPH40_RS01710  415294 ..  415305 -  -2.2  -5.46629   AATACCCCAAAAAAA                GTGC TAAT ACAC                 CTCCATCACACATAA  79 125
LPH40_RS01695  412527 ..  412537 -  -3.2  -2.74488   TAACTAGTCTAAGCA                 GCAC CTA ATGC                 ATCCAGGTCAATCAA  42 133
LPH40_RS01685  409696 ..  409708 -  -3.4  -4.37658   AACTTCCCCACAAAA                GCTT ATATG AAGC                CTGCTTCAGCCCGGA  63 31
LPH40_RS01665  403462 ..  403478 -  -3.7   -3.2819   ACCGAACATCAGCAA              TGCAG TCACCAC CTGCA              GCGTGCGAAGGTCGT  48 458
LPH40_RS01660  402497 ..  402521 -  -4.9   -4.3898   ACGAGCGCTACAAAA          TCAGCCCGATC GCC GACTGGACCGA          CCGTGACATTTGGCA  68 442
        cysD NONE
        cysN  394935 ..  394953 -  -8.8  -2.75064   CCGTCCAGCCAAGTA             CCAACCCT CTA AGGGATGG             AATCAACTCCCGATC  62 281
         rph NONE
        rdgB  390153 ..  390166 -  -3.8  -3.71751   AGACAATATAGACAA               GCAG GTCCTT CTGC                ACTCCATCACAACGG  55 119
        hemW NONE
LPH40_RS01600 NONE
LPH40_RS01595  386008 ..  386028 -  -8.3  -2.73875   GCCTCGGTAACACCA            TGTCAATGC CCA GCATTGACC            CAGCGGCGTACGTAC  61 7
LPH40_RS01575 NONE
LPH40_RS01570  381188 ..  381207 -  -6.4  -2.64794   GGCAATCTCACACCA            GCGAAGCT GGAT AACCTCGC             CCGTAACCGTTACAG  53 102
LPH40_RS01565  374089 ..  374114 - -18.3  -5.48787   ACAATACAGAAAAAA         CGCGGGCAGCA CAGT CGCTGCCCGCG          CATACACATCACCAG 100 34
        gspE  372033 ..  372047 -  -2.1  -2.71912   TTATAGCGATACAAC               GGCAT GCGTT ATACC               TCAACGTCCACTGGC  39 51
LPH40_RS01555  370688 ..  370702 -  -4.2  -3.87147   AGATAATAAGAAATA               GATGCA GAA CGCACC               CGTATCATGTTAAGA  57 143
        gspG  370190 ..  370206 -  -2.1  -3.30771   CGAGACTGCTGACAA              CGCAATG GAA CAGAGCG              AGACAACATGCCGCT  45 40
LPH40_RS01545  369716 ..  369733 -  -6.3  -2.60763   CTGACACTTCATAAT             GCTGCAGA CGT TC-GCAGC             GGACCGGAACGCACC  53 1
LPH40_RS01540 NONE
LPH40_RS01535 NONE
LPH40_RS01530 NONE
LPH40_RS01525  367496 ..  367510 -  -2.1   -3.1704   AACAAAATCTGAATA              CG-GCA CAAT TGCTCG               GCCACCTTCAGGCCC  43 185
LPH40_RS01520 NONE
LPH40_RS01515 NONE
        gspM NONE
LPH40_RS01505 NONE
        gspD  362008 ..  362023 -  -3.3  -3.75105   GCAATTCATTAATAA              CATCA TGACCG TGATG               CTGCTGATACGAATC  53 258
LPH40_RS01495  353350 ..  353379 - -10.1  -3.73914   ATCACCGAGTAACAA       GCCGAGATTCC TCCTTAAT GAAATCTCGGC        TTTTGTTGCCCTTAC  79 224
        ahpC  352396 ..  352409 -  -3.8  -4.32034   TGAGGAGGATTAAAA               GCGA ACAGCA TCGC                TGCGCTGCACATCGC  65 171
        ahpF  350683 ..  350695 -  -5.5  -3.89215   GTTCATAAAGCCAAA                CCTCG CGG CAAGG                GAGCGAATTTAAGTC  61 108
LPH40_RS01480  349542 ..  349556 -  -2.8  -3.55173   AGCAGAACAGCACAA               GAAGTC AAA AACTCC               AATCAGTGGCTTGTT  49 207
        tsaB  348354 ..  348368 -  -2.8  -3.18681   GCTCAACCTGATGAA               GCGT AATACAG ACGC               CCCCCCCCCCACAAA  45 415
LPH40_RS01470  347615 ..  347640 - -14.7  -3.48766   CTTACAATGGAAAGA         CGCCCACACGG CAAA CCGTACGGGCG          GTTGTTAGATATTCA  93 200
LPH40_RS01465  346214 ..  346242 -  -4.5  -4.90079   AGGTGAAGAATAAAA        GCGGCACCTCA CCTTATT TGAGGTGCCTT        TTGAGGCGACTTAGT  77 52
        coq7  344345 ..  344355 -  -6.8  -3.09208   AAATCATCGAGTCAA                 TGCG AAG CGCA                 TCGGTACCCTCCTAC  55 169
         crp  342164 ..  342191 -  -4.9  -3.65902   TCTATGTCACGTAAA        GC-ATCCCCCTG TAAGG CAAGGGAATAGC        TACGTTCAAACGGCG  57 454
LPH40_RS01435 NONE
LPH40_RS01430  341213 ..  341238 -  -9.7  -4.40605   ATCCAGAAATATAAA         GGAGCCCAGGA TTCA TGCTGGACTCC          TTTGAGGAATTGCAC  85 43
LPH40_RS01420  337428 ..  337451 - -15.4   -4.7373   TCACTCCACCAAAAA          GAAAGCCCTC TGCA GAGGGCTTTC           CTTGAATTGTTTTAA 100 111
LPH40_RS01390  322438 ..  322450 -  -7.7  -3.59262   TTGGACACCTGCAAA                TGCTG CGT CAGCA                AGCGATGGAAATAAC  63 400
LPH40_RS11935  321005 ..  321026 -  -7.9  -3.26722   TTCACATTTACAACA           GCTCCGACC TATG GATCGGCGC            ATCCGTAGGTATAGC  59 277
LPH40_RS01365  317464 ..  317477 -  -5.9   -3.0814   ACGGAGACTCCAATA               GCAGC GATG GCCGC                CGTGGCAATGGTTGA  53 475
LPH40_RS01360  316109 ..  316119 -  -2.4  -2.73275   CATGCATAGAGATGA                 CTCC TTA GGCG                 GGGATTAAGGAAGGA  39 30
LPH40_RS01355  314760 ..  314771 -  -2.2  -3.51924   TCTTCATGCATACAA                CGAA CGAC CTCG                 CCCAATCCCATAGTA  47 2
LPH40_RS01350 NONE
LPH40_RS01345  313661 ..  313675 -  -7.2  -2.50988   TCAGACCACCAAGAC               TGACTT GCC AAGTCA               TAAGACATGACCGAC  56 196
        fucP NONE
LPH40_RS01335 NONE
LPH40_RS01330  308423 ..  308439 -  -2.1  -3.68836   ACACCGATCCAACAA              GTGGAAC CAA GCCCCCC              GTCCTTGCACAGATA  50 137
LPH40_RS01310  301489 ..  301503 -  -2.8  -4.68994   AGGATCAGCTAAAAA               CATGCT GCC AACACG               CCTTCAAAACGATTA  68 218
LPH40_RS01305  300757 ..  300772 -  -6.1  -3.61268   TATGGAATGGTGAAA              CCGGA CTACCT TCCGG               ACTACTACTCACCAT  58 323
LPH40_RS01295 NONE
LPH40_RS01290 NONE
LPH40_RS01285  294874 ..  294888 -  -4.2  -4.13014   TGCATACGGTCAAAA               GCTGGA AAT TCGAGC               CAGTTAAGGCCATGG  61 180
        serC  292119 ..  292135 -  -2.2  -2.78996   TACGGGGACCCAAAT              CAACCG TAGCG CTGTTG              GAAATCATGCATGAA  40 8
        pheA  290844 ..  290881 -    -2  -5.00616   GGTTTCTGCAAAAAA  CGGCGACCACAGCA-CAA ACTG CCGATGCGGTGGTCA-CG   TGTGCAGACATCGAA  70 57
        aroA  289219 ..  289236 -  -9.9   -5.2189   GTAACCAGGAAAAAA             GCATGCA CACC TGCATGC              ACAACTCAATTTCTT 100 264
        serS  286211 ..  286225 -  -4.2  -4.66537   AATAAAGCAAATAAA               GCGGAA AAT TTCTGC               TCAGCAATCGGCACA  71 402
LPH40_RS01250  284421 ..  284449 -  -2.6  -3.55122   CATCATTCAAATGAA       GCGTGTGTT-TTCA GAT CGAACAACACA-GC       AAACAGTCAACCAAT  49 177
LPH40_RS01245  283288 ..  283298 -  -2.4   -4.1899   CCACTTCATTGAAAA                 GCCG TAT CGTC                 TCCATTTTTCTGCCC  57 5
LPH40_RS01240 NONE
LPH40_RS01235  280716 ..  280732 -    -5  -2.75891   AGATCCATCCAACCA              GCCGCC GCACA GGCGCC              CATGCTTTCCATAGC  47 336
LPH40_RS01230 NONE
LPH40_RS01225 NONE
LPH40_RS01220  278095 ..  278106 -  -4.4  -2.65521   CCCACATCAACCAAG                CACA CATC TGTG                 AAATAAATTTACTCT  44 496
LPH40_RS01215  275845 ..  275860 -  -4.6  -3.53444   CCATCGTGCCTGAAA              TCGCTG CACT CTGCGA               TGCACGCCGGATACC  55 120
LPH40_RS01190  269820 ..  269856 -  -5.8  -3.01712   CGCTCTTCTCCAATA   GGCTAGACGTGTGGCCT CTCA AGGCCACACGA-TCGAC    TTCGCATCGAATGGG  53 221
LPH40_RS11930  263449 ..  263461 -  -3.3  -3.61506   TGATCCGCAAAAAAC                CGAGC CAC GCTAG                CGCTTCAGCCCAAGC  50 22
LPH40_RS01170  261143 ..  261157 -  -4.2  -4.43309   CAATGGGAAGCAAAA               GCGACA CGG CGTCAC               CCAAACCCGAAAGCA  65 319
LPH40_RS01165  258470 ..  258515 - -11.9  -3.64599   CTAGCAGACGGTAAA CTCCG-GCCACTGGAGGCAGGC TGT GCCTACCTCCAGTTGCACCAAA CGTCCTTTCCAAACC  85 468
LPH40_RS01150 NONE
LPH40_RS01145  253209 ..  253239 - -12.1  -5.31456   TCAACTTACAAAAAA       TAAAAAAGCTGTC GCAAT GACAGCTTTCTTA       TTAAATCAATCCATT 100 26
LPH40_RS01130 NONE
LPH40_RS01125  245460 ..  245486 - -10.9  -4.49756   CTTCAAATACCAAAA        CGCCGCACCTCGG CAA CCGAGG-GCG-CG        AACGTTCCATAGCCT 100 49
         dxs  242126 ..  242139 -  -8.1  -3.60792   TCTCGAATCGCCAAA               GCCCT GAAC AGGGC                TCCACACGTGTACTC  66 127
LPH40_RS01065  232975 ..  232985 -  -5.4  -2.91383   AGCTCCAGTCACACA                 CTCT GCG AGAG                 CAGATGAAGCCTGAC  49 8
LPH40_RS01060  232663 ..  232678 -  -2.5   -3.6543   CAACTCGGGAAAAGA              CCGAA CTTTAT CTCGG               GCAAACCAATCAGGG  50 88
LPH40_RS11925  226865 ..  226879 -  -6.4  -2.72799   TCTTCAGACAGATGA               TCTCAG CAG CCGAGA               AGCCCGTCACAGCAA  53 32
        pbpC  224241 ..  224251 -  -5.4  -2.82327   CCGCCACATGCAAAC                 GTGA GTA TCAC                 TGAACGCCGACACGC  49 82
LPH40_RS01040  223052 ..  223075 - -11.7  -4.53034   CTCACACAAGGAAAA          GCCCGTAGC ATCGAA GCCACGGGC           CCGCCCGATCCGTTC 100 129
LPH40_RS01035  221862 ..  221874 -  -4.1   -4.3351   AGAAAATGCAATAAA                GAAAC CTC GCTTC                AACGCTTGCCAAGCC  65 300
        katG  219310 ..  219325 -  -3.2  -5.38549   GCGAAACAACAAAAA              TCAGTG CGAA CACTGT               TGCCGTACTCATCAA  81 125
LPH40_RS01025  216960 ..  216971 -    -3  -2.62263   ATGCTGGTTAGATTA                TTGA CGGA TCAA                 GGATCCAGCTCTGTT  41 241
LPH40_RS01020  216114 ..  216137 -  -7.4  -3.01924   TACCGTCGGGGAATA          TGGGCGATGCC TCA GGCAT-GCCCT          GTATAGTCCGTTAAC  59 13
        ruvX  215669 ..  215686 -  -3.3  -3.80855   GGTTCGAAAAATCAA             GGAAGCG ACGT CGCCTGC              GTGGGATCGGCAAAC  55 4
LPH40_RS01010  214680 ..  214692 -  -5.5   -2.8934   TTGCAAACGACGACA                CCGCA TCA TGCAG                TCGCGCTCAGCCCAG  49 32
LPH40_RS01005  214200 ..  214210 -  -5.4  -2.85668   CAGCCGGACAGCAGA                 CGAT GAC ATCG                 ACAGACCTCATGATG  49 114
        thrA NONE
LPH40_RS00995 NONE
        thrC  209064 ..  209087 -  -2.3  -4.82548   CAAAAACAGATAAAA          GCAGGCAGC CATTTT ACCGGCTGC           GGTCCCTGCAGATGA  67 330
        hisS NONE
LPH40_RS00980  207262 ..  207273 -  -7.2  -3.06501   TACATCTTGATTTAA                GCCG GCAA CGGC                 GCTTGACCGCATCTC  59 135
LPH40_RS00975 NONE
        hisG NONE
        hisD NONE
        hisC NONE
        hisB NONE
        hisH NONE
        hisA  200616 ..  200631 -  -4.6  -2.78384   TGTGCCGCCACCACA              CGGCCA GAGA CGGCCA               TGCGGACATACCACA  47 63
        hisF NONE
       hisIE  198850 ..  198875 -  -7.6   -3.0976   CTCAATACCTCAATA         CCACGGTATG CCAAGC CACACCGTAG          CCCAATGCAATGCTG  62 323
LPH40_RS00920  195938 ..  195964 - -11.6  -3.72576   CGTTCGGCCATGAAA         CGCGCCGCCTTA ACC TAAGGCAACGCA         AGTTGCGACTTCACT  85 68
LPH40_RS00915  195305 ..  195330 -  -8.9  -3.25942   ATCCCCGCACATCAA         TCCGCAACCAC CGTC GTGGGAGCGGA          TCTGCACTTGCATTA  67 92
LPH40_RS00880  186756 ..  186770 -  -4.2  -3.73775   GGCACGGCCACCAAA               CGCC CCAAACC GGCG               AAGCTCATGACGGGC  57 273
LPH40_RS00840 NONE
LPH40_RS00835 NONE
LPH40_RS00830  169458 ..  169500 -  -3.3  -2.94962   ATATTAGCAATCATA CCCGCACCGGCACC-C-CCCC TTG GGGACGCGGCACCCGTGCAGC AACACCACTCACCTC  45 69
LPH40_RS00825 NONE
LPH40_RS00820 NONE
LPH40_RS00815 NONE
LPH40_RS00810  165360 ..  165381 -  -8.1  -3.08679   TGCTTCGATTCAACA           GCGATGCTTG CAG CAA-CATCGC           ATGCAAGCACCTAAA  60 102
LPH40_RS00805 NONE
LPH40_RS00800 NONE
LPH40_RS00795 NONE
LPH40_RS00790 NONE
LPH40_RS00785  162539 ..  162568 -  -8.5  -2.75382   GAGCTTATTTAACTA       GCCGCTGGCGGCA CCAT TATCACCAGCAGC        CTTGATGCTCATCCA  62 34
LPH40_RS00780 NONE
LPH40_RS00775  161690 ..  161711 -  -8.1  -3.08679   TGCTTCGATTCAACA           GCGATGCTTG CAG CAA-CATCGC           ATGCAAGCACCTAAA  60 102
LPH40_RS00770 NONE
LPH40_RS00765  160864 ..  160874 -  -2.4  -2.94962   ATATTAGCAATCATA                 CCCG CAC CGGC                 ACCCCCCCTTTAGGG  42 102
LPH40_RS00760 NONE
LPH40_RS00755  159579 ..  159589 -  -2.4  -3.54741   TATGACGCGCTGAAA                 GCCG ATC CCGC                 CCGAGCTATCACCCC  48 485
LPH40_RS00740 NONE
LPH40_RS00735 NONE
LPH40_RS00730 NONE
LPH40_RS00725 NONE
LPH40_RS00720 NONE
LPH40_RS00715 NONE
LPH40_RS00710 NONE
LPH40_RS00705 NONE
LPH40_RS00700  140702 ..  140730 - -13.9   -2.7556   AAGCTGATTTAACTA        GCCGCTGGTAACA TCA TGTCATCAGCGGC        CTTGATGCTCATCCA  88 34
LPH40_RS00695 NONE
LPH40_RS00690 NONE
LPH40_RS00685 NONE
LPH40_RS00680 NONE
LPH40_RS00675 NONE
LPH40_RS00670 NONE
LPH40_RS00665 NONE
LPH40_RS00660 NONE
LPH40_RS00655 NONE
LPH40_RS00650  134897 ..  134920 -  -2.6  -4.16121   CAAAAACACTATAAA          TTTATTC-AGC AAC GCTTAAATAAA          ACACCAGGATAGACG  59 7
LPH40_RS00645 NONE
LPH40_RS00640 NONE
LPH40_RS00635 NONE
LPH40_RS00630 NONE
LPH40_RS11915  133263 ..  133275 -  -3.3  -4.93288   AACATTTAAATAAAA                CCCCA AGA TGGGT                ATTCACCGTCACACC  73 34
LPH40_RS00625 NONE
LPH40_RS00620  132140 ..  132156 -  -2.2  -4.26188   GCCAGAGACCGAAAA              GCAGCT TGGCG AGCTGT              ACCGCCACATTGCAA  60 336
LPH40_RS00610  131481 ..  131498 -  -4.7  -3.72453   ACCAACAACGCCAAA             CAGCGCC CAGC GGCGACG              CGGCCTTGCTGAGTA  57 294
LPH40_RS00605  130328 ..  130338 -  -6.8  -2.96216   TCGCAGCAGCATACA                 CCGA GCT TCGG                 AGTCAGCCTTGCTGA  55 438
LPH40_RS11910  127115 ..  127133 -  -6.6  -2.66976   CAACAAGACAAAACG             GGCGGCCA TCT TAGCCGCT             ACACCCGTTGCGTGG  53 24
LPH40_RS00590  126763 ..  126785 -  -7.6  -2.75382   CAGGTGATCCAATCA           CTCAGACGGC CAC GCCGCTCGAG           CCATGGATTATGCAT  59 161
        trxA  119343 ..  119356 -  -5.9  -3.37879   ATCAATCTGAATGAA               GCAGC CTGT GCCGC                TTAACCACCAAGCAC  57 98
LPH40_RS00535  112232 ..  112244 -  -2.7  -4.21936   CTGATAACTCGAAAA                CTCAT GAA ATAAG                CTAAACGTACAATCA  59 197
LPH40_RS00525  109793 ..  109815 -  -8.4  -3.26031   GTTACGTTAAACATA           TCGACTGCTG TTA CAGCAGCAGA           AAACAAGCTCATTAA  64 94
LPH40_RS00520  109189 ..  109218 -  -7.3  -3.67498   TAATTTTTAAGACAA       TTGAAATACTTAG TAAA CCAAGTATTTCCA        TCATTACAGGAGGCG  67 331
         rnr   95281 ..   95323 - -11.5  -3.17797   GTCATATACACCGAA TCCTTCCATCTTCAAGCAA CAGCT TCACCTGAAGATGGAAGCA GTCCCACCCGCTCGG  79 84
        rlmB   94050 ..   94060 -  -3.2  -3.40331   AATTCATTGAAAAAT                 CGCA AAT TGCA                 TCCTTGACCGGGACA  48 214
LPH40_RS00425   91738 ..   91757 -  -2.9  -4.51378   AGGTACAGGAGAAAA            TGACTGCA CAGAT TGCAG-CA            TGCATCCAGGACACA  64 308
LPH40_RS00415   86140 ..   86152 -  -2.6  -3.28041   AATGTCAAGCACCAA                GCGA TCATG CCGC                AGAAGCCGATTGACA  47 492
        ampE   84507 ..   84525 -  -2.4  -4.36262   ACAGTGATATGAAAA             TCGAGC AAGGCCG GCTCAA             TCTCAGTCAGCACTT  61 201
LPH40_RS00405   83730 ..   83741 -  -2.2  -4.06904   TGACGGAATTAGAAA                CCGA CTCC TCGA                 CTATCTGAACGGCCA  55 344
LPH40_RS11905 NONE
LPH40_RS00385   78832 ..   78857 -  -8.9  -3.14344   CAGCTTGCCCATGAA         CGCGCAGTGCC TACC GGCACTGTGCT          GACCGCGTGCACGTT  67 43
LPH40_RS00370   73948 ..   73964 -  -5.1  -2.62613   CTCTATGGGAAACAT              CATTCAC TTG GAGAATG              TTAAGCGTGAGTCAC  48 26
LPH40_RS00360   72580 ..   72594 -    -7  -2.95009   AACATAAATAAATAG               CGCCAG AAT CGGGCG               AGAGGCGGTTATTCT  59 107
LPH40_RS00355   71508 ..   71535 -  -2.6  -3.45324   CAGGGGCATCAAAGA        CTCCCCTCATTT TTCA ACATGAGGGCTG         CTTGGCCCATCCTGG  49 43
LPH40_RS00350 NONE
LPH40_RS00345   69631 ..   69648 - -11.3  -3.12351   TGGGTTGACACTCAA             GCCATGC AGCA GCATGGC              CCACAAACGCATAGC  76 60
LPH40_RS00340 NONE
LPH40_RS00335   68952 ..   68964 - -10.5  -2.92157   CAGCAATGCGACACA                GCGCG GCG CGCGC                ACGGACTGCACATCC  67 99
LPH40_RS00325   68189 ..   68206 -  -6.9  -2.82193   AGCAGAGGTACCAGA             GGCGCAC ACGC ACGCGCC              AACGGAATACTGTCA  54 146
LPH40_RS00320 NONE
LPH40_RS00315   67439 ..   67454 -  -2.6  -3.59516   AGAAACCAATGAGAA              GC-TCTT AAA AAGACGC              CGAGAACAACACGTG  49 42
LPH40_RS00310   65026 ..   65051 -  -9.1  -2.79183   TTCAGTGTCAGGACA         CT-CATGAGCCA TTC TGGCTCACGCAG         AGGTCGTTGTTGTAC  65 262
        glyQ   63982 ..   63993 -  -3.6  -3.68222   CGCCAATGGCAACAA                GCGG CACA CCAC                 ACTTATCAAAACGGA  53 60
        glyS   61768 ..   61782 -  -4.2  -4.01888   ATCCCAGAGGAGAAA               GCTGAC ATT GTCATC               AGCTGGACAAATGCT  60 24
LPH40_RS00280 NONE
LPH40_RS00275   56809 ..   56839 -  -3.2  -3.25137   AATCTAAATATGCAA      GACGGGATAGCCG ATCAAG CGGC-AGCCTGTC       TAAATTCGGGTGTCC  46 9
LPH40_RS00270   54740 ..   54758 -  -4.6  -2.85061   ACAAGCTGAGAAGCA             TTCAAGCT GGC AGTTTGAA             GTTGGCTGCCGAGCG  47 8
LPH40_RS00265 NONE
LPH40_RS00260 NONE
LPH40_RS00255   47239 ..   47257 -  -3.2  -4.30014   CTCACCAACTCAAAA             CGTTAA ATACACA TTAACG             TCCAATCATTAATTG  60 418
LPH40_RS00230   40868 ..   40889 -  -5.8  -3.40403   GTGTGTTCAGCAGAA           CGAGGTGG CATCGT CCATCTCG            TTCTTATTTCTAATT  57 66
LPH40_RS00215 NONE
        msrA   33976 ..   33990 -  -2.7  -3.81027   TTCAATCAATTGAAA               CGCTG GTTGG CTGCG               ATCGACTAACGATCT  54 210
LPH40_RS00200   32307 ..   32335 - -14.7  -4.41348   TCGGTGCTAAAGAAA        GGGACATCGTG AAAATCG CACGATGTCCC        GCTATTGTCCCACAG 100 81
         tkt   29944 ..   29968 -  -5.6  -3.14211   ACTCGGTTTGAGCAA          TGCGCGCG TGTCTGAAG CGCGCGCT          GAAGCATTGGACGAA  50 342
LPH40_RS00175   24360 ..   24376 -  -3.8  -3.99461   AGCAACCCAAAAATA              TCTTTA TAATT TAAAGA              AAAAATACCGCAACA  60 165
LPH40_RS00170 NONE
LPH40_RS00165   21171 ..   21187 -  -4.3  -3.19157   CAGCAAGTTCAGCAA              CTCTCCG CGC CAGAGCG              GTTTGGCCGTCGCCC  48 515
LPH40_RS00150   19129 ..   19147 -  -3.1  -4.75954   AAAACGGAAAATAAA             GCACG AAAGGACAG CGTGC             CTCTTTCACAAACGT  68 41
        queC NONE
LPH40_RS00135   15249 ..   15270 -  -5.1  -3.24735   GATCGAAATAGCCAA           TGCAGACGC GAGC ACGTTTGCA            AAAGTACGTGAAGAA  52 156
LPH40_RS00130   14671 ..   14686 -  -7.6  -3.21416   CACTCGTATTATCAA              GAGCAT GTCA ATGCTC               AATTAATGCCCTGCA  62 17
LPH40_RS00125   14234 ..   14244 -  -5.4  -2.73085   CAGTGGAAAGAATAT                 TCTG AGA CAGA                 CACATAGCCTCCCGC  48 246
LPH40_RS00120 NONE
LPH40_RS00115 NONE
LPH40_RS00110 NONE
LPH40_RS00105   12057 ..   12082 - -12.6  -2.71924   CATGCCTCCTTAAAT         CGGGGTGCCT GTACAA AGACACCCCG          TCCACATGAAAGAGA  81 54
LPH40_RS00100 NONE
LPH40_RS00095 NONE
LPH40_RS00090    8829 ..    8846 -  -7.7  -3.90588   CACCGTTGAACCAAA             CATAGCC AATG GGCTACG              GACGCTCTCGCAAAT  69 262
LPH40_RS00065    6630 ..    6640 -  -2.4  -3.10796   GCGCATGATCTAATA                 CTCC GCT GGGG                 TTTTAGAGTCCGGCT  43 9
LPH40_RS00060    6361 ..    6371 -  -3.2  -4.01646   CATATAAAAAACTAA                 GCAG CCG CTAC                 GGAAAGAGATTCCTC  58 11
LPH40_RS00055 NONE
LPH40_RS00050    5673 ..    5717 -  -2.5  -2.87581   TCAACGGAAAGATCA CGGGCTCACGTATCCGTGGAC ATT GCCTACGGCACCGTGTGCACA TCTCATTGACAGTGG  40 153
LPH40_RS00045    4952 ..    4992 -  -3.9  -2.52464   TGTGGGGTCAAGCTA  TGATCCCCCCTTACCCCCC AGC AGGAGACAAGGAAGAACCG  CTTGAGTACCCACAG  44 94
LPH40_RS00040    4454 ..    4470 -  -4.3  -3.26545   CGCAGACACCAGCAA              CGTTGCC ACA GGCATCA              CTACGCCACCTTAGA  48 26
LPH40_RS00035 NONE
LPH40_RS00030    3970 ..    3992 -  -9.1  -5.03314   CCCACCTCGAAAAAA           GGGGTGCCC GACCA AGACACCCC           AAACACATCAAAATA 100 50
LPH40_RS00025 NONE
LPH40_RS00020    2088 ..    2099 -  -3.6  -3.08015   GTAATCACGTGAATA                GGCA TACA CGCC                 CCCTGTCAAGAAACC  45 31
LPH40_RS00015     973 ..     985 -  -4.7  -2.64536   AATGAAATTAAGGCA                GCGCC CCT GCCGC                AGACACACTCACCTG   0 5
