locus-tag class description CEW88_RS00010 PF01565 FAD binding domain CEW88_RS00015 PF02754 Cysteine-rich domain CEW88_RS00015 PF13183 4Fe-4S dicluster domain CEW88_RS00020 PF00089 Trypsin CEW88_RS00025 PF00089 Trypsin CEW88_RS00030 PF00011 Hsp20/alpha crystallin family CEW88_RS00035 PF00107 Zinc-binding dehydrogenase CEW88_RS00035 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS00040 PF03466 LysR substrate binding domain CEW88_RS00040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS00055 PF00171 Aldehyde dehydrogenase family CEW88_RS00060 PF07509 Protein of unknown function (DUF1523) CEW88_RS00075 PF13247 4Fe-4S dicluster domain CEW88_RS00075 PF12800 4Fe-4S binding domain CEW88_RS00080 PF00384 Molybdopterin oxidoreductase CEW88_RS00080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW88_RS00080 PF01568 Molydopterin dinucleotide binding domain CEW88_RS00095 PF13439 Glycosyltransferase Family 4 CEW88_RS00095 PF00534 Glycosyl transferases group 1 CEW88_RS00100 PF01757 Acyltransferase family CEW88_RS00105 PF05199 GMC oxidoreductase CEW88_RS00110 PF00106 short chain dehydrogenase CEW88_RS00120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS00120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS00130 PF00534 Glycosyl transferases group 1 CEW88_RS00130 PF13439 Glycosyltransferase Family 4 CEW88_RS00135 PF00535 Glycosyl transferase family 2 CEW88_RS00140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS00140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS00145 PF13614 AAA domain CEW88_RS00155 PF17837 4'-phosphopantetheinyl transferase N-terminal domain CEW88_RS00155 PF01648 4'-phosphopantetheinyl transferase superfamily CEW88_RS00160 PF00550 Phosphopantetheine attachment site CEW88_RS00160 PF00668 Condensation domain CEW88_RS00160 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS00160 PF00501 AMP-binding enzyme CEW88_RS00170 PF00698 Acyl transferase domain CEW88_RS00170 PF16197 Ketoacyl-synthetase C-terminal extension CEW88_RS00170 PF00668 Condensation domain CEW88_RS00170 PF00550 Phosphopantetheine attachment site CEW88_RS00170 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW88_RS00170 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW88_RS00185 PF00534 Glycosyl transferases group 1 CEW88_RS00185 PF13439 Glycosyltransferase Family 4 CEW88_RS00195 PF08502 LeuA allosteric (dimerisation) domain CEW88_RS00195 PF00682 HMGL-like CEW88_RS00205 PF04321 RmlD substrate binding domain CEW88_RS00210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS00210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS00225 PF00571 CBS domain CEW88_RS00225 PF01380 SIS domain CEW88_RS00230 PF02348 Cytidylyltransferase CEW88_RS00235 PF00793 DAHP synthetase I family CEW88_RS00240 PF04172 LrgB-like family CEW88_RS00245 PF03788 LrgA family CEW88_RS00270 PF00814 Glycoprotease family CEW88_RS00275 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEW88_RS00275 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEW88_RS00300 PF01235 Sodium:alanine symporter family CEW88_RS00310 PF05221 S-adenosyl-L-homocysteine hydrolase CEW88_RS00310 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CEW88_RS00320 PF01966 HD domain CEW88_RS00330 PF00072 Response regulator receiver domain CEW88_RS00335 PF02630 SCO1/SenC CEW88_RS00340 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS00340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS00350 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CEW88_RS00355 PF01636 Phosphotransferase enzyme family CEW88_RS00360 PF12804 MobA-like NTP transferase domain CEW88_RS00365 PF12705 PD-(D/E)XK nuclease superfamily CEW88_RS00370 PF13361 UvrD-like helicase C-terminal domain CEW88_RS00370 PF12705 PD-(D/E)XK nuclease superfamily CEW88_RS00370 PF00580 UvrD/REP helicase N-terminal domain CEW88_RS00375 PF00085 Thioredoxin CEW88_RS00385 PF00227 Proteasome subunit CEW88_RS00390 PF07724 AAA domain (Cdc48 subfamily) CEW88_RS00390 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS00405 PF00561 alpha/beta hydrolase fold CEW88_RS00420 PF00795 Carbon-nitrogen hydrolase CEW88_RS00425 PF00462 Glutaredoxin CEW88_RS00435 PF08241 Methyltransferase domain CEW88_RS00440 PF00762 Ferrochelatase CEW88_RS00450 PF03734 L,D-transpeptidase catalytic domain CEW88_RS00460 PF03734 L,D-transpeptidase catalytic domain CEW88_RS00465 PF05958 tRNA (Uracil-5-)-methyltransferase CEW88_RS00470 PF00005 ABC transporter CEW88_RS00470 PF00664 ABC transporter transmembrane region CEW88_RS00475 PF00664 ABC transporter transmembrane region CEW88_RS00475 PF00005 ABC transporter CEW88_RS00485 PF13735 tRNA nucleotidyltransferase domain 2 putative CEW88_RS00485 PF01743 Poly A polymerase head domain CEW88_RS00485 PF12627 Probable RNA and SrmB- binding site of polymerase A CEW88_RS00490 PF00293 NUDIX domain CEW88_RS00495 PF01430 Hsp33 protein CEW88_RS00500 PF00293 NUDIX domain CEW88_RS00505 PF00072 Response regulator receiver domain CEW88_RS00505 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS00515 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS00515 PF00585 C-terminal regulatory domain of Threonine dehydratase CEW88_RS00525 PF00764 Arginosuccinate synthase CEW88_RS00535 PF01625 Peptide methionine sulfoxide reductase CEW88_RS00540 PF00294 pfkB family carbohydrate kinase CEW88_RS00545 PF01515 Phosphate acetyl/butaryl transferase CEW88_RS00545 PF03949 Malic enzyme, NAD binding domain CEW88_RS00545 PF00390 Malic enzyme, N-terminal domain CEW88_RS00550 PF05188 MutS domain II CEW88_RS00550 PF00488 MutS domain V CEW88_RS00550 PF01624 MutS domain I CEW88_RS00550 PF05192 MutS domain III CEW88_RS00550 PF05190 MutS family domain IV CEW88_RS00555 PF01025 GrpE CEW88_RS00560 PF01628 HrcA protein C terminal domain CEW88_RS00565 PF03725 3' exoribonuclease family, domain 2 CEW88_RS00565 PF01138 3' exoribonuclease family, domain 1 CEW88_RS00570 PF01725 Ham1 family CEW88_RS00575 PF04055 Radical SAM superfamily CEW88_RS00575 PF06969 HemN C-terminal domain CEW88_RS00580 PF02195 ParB-like nuclease domain CEW88_RS00580 PF17762 HTH domain found in ParB protein CEW88_RS00585 PF13614 AAA domain CEW88_RS00590 PF02527 rRNA small subunit methyltransferase G CEW88_RS00595 PF13932 GidA associated domain CEW88_RS00595 PF01134 Glucose inhibited division protein A CEW88_RS00600 PF10396 GTP-binding protein TrmE N-terminus CEW88_RS00600 PF12631 MnmE helical domain CEW88_RS00600 PF01926 50S ribosome-binding GTPase CEW88_RS00605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS00605 PF07498 Rho termination factor, N-terminal domain CEW88_RS00605 PF07497 Rho termination factor, RNA-binding domain CEW88_RS00610 PF02545 Maf-like protein CEW88_RS00615 PF01488 Shikimate / quinate 5-dehydrogenase CEW88_RS00615 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEW88_RS00615 PF08501 Shikimate dehydrogenase substrate binding domain CEW88_RS00620 PF01121 Dephospho-CoA kinase CEW88_RS00625 PF00929 Exonuclease CEW88_RS00630 PF02556 Preprotein translocase subunit SecB CEW88_RS00635 PF04186 FxsA cytoplasmic membrane protein CEW88_RS00650 PF01713 Smr domain CEW88_RS00655 PF00293 NUDIX domain CEW88_RS00665 PF02563 Polysaccharide biosynthesis/export protein CEW88_RS00665 PF10531 SLBB domain CEW88_RS00665 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEW88_RS00670 PF02397 Bacterial sugar transferase CEW88_RS00680 PF06082 Exopolysaccharide biosynthesis protein YbjH CEW88_RS00685 PF00691 OmpA family CEW88_RS00685 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEW88_RS00690 PF00460 Flagella basal body rod protein CEW88_RS00690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS00690 PF07559 Flagellar basal body protein FlaE CEW88_RS00705 PF02119 Flagellar P-ring protein CEW88_RS00710 PF01618 MotA/TolQ/ExbB proton channel family CEW88_RS00725 PF00771 FHIPEP family CEW88_RS00735 PF01312 FlhB HrpN YscU SpaS Family CEW88_RS00750 PF02107 Flagellar L-ring protein CEW88_RS00760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS00760 PF00460 Flagella basal body rod protein CEW88_RS00765 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS00765 PF00460 Flagella basal body rod protein CEW88_RS00770 PF01313 Bacterial export proteins, family 3 CEW88_RS00775 PF02049 Flagellar hook-basal body complex protein FliE CEW88_RS00780 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS00790 PF18269 T3SS EscN ATPase C-terminal domain CEW88_RS00790 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS00790 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW88_RS00800 PF07378 Flagellar protein FlbT CEW88_RS00810 PF00700 Bacterial flagellin C-terminal helical region CEW88_RS00810 PF00669 Bacterial flagellin N-terminal helical region CEW88_RS00835 PF03109 ABC1 family CEW88_RS00840 PF01209 ubiE/COQ5 methyltransferase family CEW88_RS00845 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CEW88_RS00845 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CEW88_RS00845 PF06827 Zinc finger found in FPG and IleRS CEW88_RS00850 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS00860 PF01649 Ribosomal protein S20 CEW88_RS00865 PF00308 Bacterial dnaA protein CEW88_RS00865 PF11638 DnaA N-terminal domain CEW88_RS00865 PF08299 Bacterial dnaA protein helix-turn-helix CEW88_RS00870 PF00712 DNA polymerase III beta subunit, N-terminal domain CEW88_RS00870 PF02767 DNA polymerase III beta subunit, central domain CEW88_RS00870 PF02768 DNA polymerase III beta subunit, C-terminal domain CEW88_RS00875 PF02463 RecF/RecN/SMC N terminal domain CEW88_RS00880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS00880 PF00204 DNA gyrase B CEW88_RS00880 PF01751 Toprim domain CEW88_RS00880 PF00986 DNA gyrase B subunit, carboxyl terminus CEW88_RS00890 PF04321 RmlD substrate binding domain CEW88_RS00930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS00935 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS00940 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS00940 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS00945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS00945 PF00005 ABC transporter CEW88_RS00955 PF00892 EamA-like transporter family CEW88_RS00960 PF00180 Isocitrate/isopropylmalate dehydrogenase CEW88_RS00975 PF01144 Coenzyme A transferase CEW88_RS00980 PF01144 Coenzyme A transferase CEW88_RS00985 PF00694 Aconitase C-terminal domain CEW88_RS00990 PF00330 Aconitase family (aconitate hydratase) CEW88_RS00995 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEW88_RS00995 PF12795 Mechanosensitive ion channel porin domain CEW88_RS00995 PF00924 Mechanosensitive ion channel CEW88_RS01000 PF00108 Thiolase, N-terminal domain CEW88_RS01000 PF02803 Thiolase, C-terminal domain CEW88_RS01010 PF18415 Histidine kinase receptor ArcB trans-membrane domain CEW88_RS01010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS01010 PF00989 PAS fold CEW88_RS01010 PF00072 Response regulator receiver domain CEW88_RS01010 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS01010 PF01627 Hpt domain CEW88_RS01015 PF03883 Peroxide stress protein YaaA CEW88_RS01020 PF00570 HRDC domain CEW88_RS01020 PF16124 RecQ zinc-binding CEW88_RS01020 PF00271 Helicase conserved C-terminal domain CEW88_RS01020 PF00270 DEAD/DEAH box helicase CEW88_RS01020 PF09382 RQC domain CEW88_RS01025 PF00472 RF-1 domain CEW88_RS01030 PF02592 Putative vitamin uptake transporter CEW88_RS01040 PF03411 Penicillin-insensitive murein endopeptidase CEW88_RS01060 PF00795 Carbon-nitrogen hydrolase CEW88_RS01065 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS01070 PF03466 LysR substrate binding domain CEW88_RS01075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS01075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS01075 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS01080 PF02515 CoA-transferase family III CEW88_RS01090 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CEW88_RS01090 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEW88_RS01105 PF00206 Lyase CEW88_RS01105 PF14698 Argininosuccinate lyase C-terminal CEW88_RS01110 PF08534 Redoxin CEW88_RS01125 PF02153 Prephenate dehydrogenase CEW88_RS01130 PF00155 Aminotransferase class I and II CEW88_RS01135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CEW88_RS01135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CEW88_RS01140 PF00857 Isochorismatase family CEW88_RS01145 PF17773 UPF0176 acylphosphatase like domain CEW88_RS01145 PF00581 Rhodanese-like domain CEW88_RS01150 PF00813 FliP family CEW88_RS01155 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEW88_RS01165 PF08345 Flagellar M-ring protein C-terminal CEW88_RS01165 PF01514 Secretory protein of YscJ/FliF family CEW88_RS01185 PF00085 Thioredoxin CEW88_RS01190 PF03734 L,D-transpeptidase catalytic domain CEW88_RS01190 PF17969 L,D-transpeptidase C-terminal domain CEW88_RS01205 PF00005 ABC transporter CEW88_RS01215 PF00459 Inositol monophosphatase family CEW88_RS01220 PF02347 Glycine cleavage system P-protein CEW88_RS01225 PF01597 Glycine cleavage H-protein CEW88_RS01230 PF01571 Aminomethyltransferase folate-binding domain CEW88_RS01230 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW88_RS01235 PF02082 Transcriptional regulator CEW88_RS01245 PF10011 Predicted membrane protein (DUF2254) CEW88_RS01250 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEW88_RS01255 PF00294 pfkB family carbohydrate kinase CEW88_RS01265 PF18331 PKHD-type hydroxylase C-terminal domain CEW88_RS01265 PF13640 2OG-Fe(II) oxygenase superfamily CEW88_RS01280 PF00795 Carbon-nitrogen hydrolase CEW88_RS01280 PF02540 NAD synthase CEW88_RS01305 PF08402 TOBE domain CEW88_RS01305 PF00005 ABC transporter CEW88_RS01315 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS01325 PF01177 Asp/Glu/Hydantoin racemase CEW88_RS01330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS01330 PF14824 Sirohaem biosynthesis protein central CEW88_RS01330 PF10414 Sirohaem synthase dimerisation region CEW88_RS01335 PF01568 Molydopterin dinucleotide binding domain CEW88_RS01335 PF00384 Molybdopterin oxidoreductase CEW88_RS01335 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW88_RS01335 PF04324 BFD-like [2Fe-2S] binding domain CEW88_RS01340 PF00355 Rieske [2Fe-2S] domain CEW88_RS01345 PF04324 BFD-like [2Fe-2S] binding domain CEW88_RS01345 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEW88_RS01345 PF18267 Rubredoxin NAD+ reductase C-terminal domain CEW88_RS01345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS01345 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEW88_RS01350 PF00005 ABC transporter CEW88_RS01355 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS01365 PF00005 ABC transporter CEW88_RS01370 PF03861 ANTAR domain CEW88_RS01370 PF08376 Nitrate and nitrite sensing CEW88_RS01375 PF01266 FAD dependent oxidoreductase CEW88_RS01380 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS01385 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS01390 PF00005 ABC transporter CEW88_RS01390 PF08402 TOBE domain CEW88_RS01395 PF13416 Bacterial extracellular solute-binding protein CEW88_RS01400 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS01400 PF07729 FCD domain CEW88_RS01405 PF00202 Aminotransferase class-III CEW88_RS01410 PF00909 Ammonium Transporter Family CEW88_RS01415 PF00543 Nitrogen regulatory protein P-II CEW88_RS01420 PF00912 Transglycosylase CEW88_RS01420 PF00905 Penicillin binding protein transpeptidase domain CEW88_RS01425 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CEW88_RS01430 PF00579 tRNA synthetases class I (W and Y) CEW88_RS01440 PF01145 SPFH domain / Band 7 family CEW88_RS01455 PF11799 impB/mucB/samB family C-terminal domain CEW88_RS01455 PF00817 impB/mucB/samB family CEW88_RS01470 PF02646 RmuC family CEW88_RS01475 PF01119 DNA mismatch repair protein, C-terminal domain CEW88_RS01475 PF08676 MutL C terminal dimerisation domain CEW88_RS01480 PF04073 Aminoacyl-tRNA editing domain CEW88_RS01485 PF13811 Domain of unknown function (DUF4186) CEW88_RS01495 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEW88_RS01495 PF12833 Helix-turn-helix domain CEW88_RS01495 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEW88_RS01495 PF02805 Metal binding domain of Ada CEW88_RS01505 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS01505 PF07729 FCD domain CEW88_RS01510 PF02391 MoaE protein CEW88_RS01520 PF01066 CDP-alcohol phosphatidyltransferase CEW88_RS01525 PF02565 Recombination protein O C terminal CEW88_RS01525 PF11967 Recombination protein O N terminal CEW88_RS01540 PF01926 50S ribosome-binding GTPase CEW88_RS01540 PF07650 KH domain CEW88_RS01545 PF00892 EamA-like transporter family CEW88_RS01550 PF00035 Double-stranded RNA binding motif CEW88_RS01550 PF14622 Ribonuclease-III-like CEW88_RS01555 PF10502 Signal peptidase, peptidase S26 CEW88_RS01560 PF01648 4'-phosphopantetheinyl transferase superfamily CEW88_RS01565 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CEW88_RS01575 PF04607 Region found in RelA / SpoT proteins CEW88_RS01575 PF02824 TGS domain CEW88_RS01575 PF13291 ACT domain CEW88_RS01580 PF01192 RNA polymerase Rpb6 CEW88_RS01585 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CEW88_RS01600 PF02401 LytB protein CEW88_RS01610 PF00075 RNase H CEW88_RS01615 PF03458 UPF0126 domain CEW88_RS01620 PF00155 Aminotransferase class I and II CEW88_RS01625 PF01327 Polypeptide deformylase CEW88_RS01630 PF01327 Polypeptide deformylase CEW88_RS01635 PF01327 Polypeptide deformylase CEW88_RS01640 PF02911 Formyl transferase, C-terminal domain CEW88_RS01640 PF00551 Formyl transferase CEW88_RS01650 PF13409 Glutathione S-transferase, N-terminal domain CEW88_RS01665 PF01425 Amidase CEW88_RS01670 PF01494 FAD binding domain CEW88_RS01685 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS01690 PF02203 Tar ligand binding domain homologue CEW88_RS01690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW88_RS01690 PF00672 HAMP domain CEW88_RS01695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEW88_RS01700 PF13382 Adenine deaminase C-terminal domain CEW88_RS01700 PF01979 Amidohydrolase family CEW88_RS01720 PF14602 Hexapeptide repeat of succinyl-transferase CEW88_RS01720 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS01720 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CEW88_RS01725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS01730 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS01740 PF02719 Polysaccharide biosynthesis protein CEW88_RS01745 PF02774 Semialdehyde dehydrogenase, dimerisation domain CEW88_RS01745 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEW88_RS01755 PF00484 Carbonic anhydrase CEW88_RS01765 PF02789 Cytosol aminopeptidase family, N-terminal domain CEW88_RS01765 PF00883 Cytosol aminopeptidase family, catalytic domain CEW88_RS01770 PF00877 NlpC/P60 family CEW88_RS01775 PF00491 Arginase family CEW88_RS01785 PF01966 HD domain CEW88_RS01795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS01795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS01795 PF01842 ACT domain CEW88_RS01800 PF00149 Calcineurin-like phosphoesterase CEW88_RS01805 PF00916 Sulfate permease family CEW88_RS01805 PF01740 STAS domain CEW88_RS01810 PF01197 Ribosomal protein L31 CEW88_RS01815 PF01245 Ribosomal protein L19 CEW88_RS01820 PF01746 tRNA (Guanine-1)-methyltransferase CEW88_RS01830 PF01782 RimM N-terminal domain CEW88_RS01830 PF05239 PRC-barrel domain CEW88_RS01840 PF00886 Ribosomal protein S16 CEW88_RS01865 PF02978 Signal peptide binding domain CEW88_RS01865 PF00448 SRP54-type protein, GTPase domain CEW88_RS01865 PF02881 SRP54-type protein, helical bundle domain CEW88_RS01895 PF00119 ATP synthase A chain CEW88_RS01900 PF00137 ATP synthase subunit C CEW88_RS01905 PF00430 ATP synthase B/B' CF(0) CEW88_RS01910 PF00430 ATP synthase B/B' CF(0) CEW88_RS01915 PF01883 Iron-sulfur cluster assembly protein CEW88_RS01915 PF10609 NUBPL iron-transfer P-loop NTPase CEW88_RS01930 PF02463 RecF/RecN/SMC N terminal domain CEW88_RS01935 PF02569 Pantoate-beta-alanine ligase CEW88_RS01940 PF02548 Ketopantoate hydroxymethyltransferase CEW88_RS01945 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS01950 PF01546 Peptidase family M20/M25/M40 CEW88_RS01950 PF07687 Peptidase dimerisation domain CEW88_RS01960 PF04752 ChaC-like protein CEW88_RS01970 PF01389 OmpA-like transmembrane domain CEW88_RS01970 PF00691 OmpA family CEW88_RS01975 PF10431 C-terminal, D2-small domain, of ClpB protein CEW88_RS01975 PF02861 Clp amino terminal domain, pathogenicity island component CEW88_RS01975 PF17871 AAA lid domain CEW88_RS01975 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS01975 PF07724 AAA domain (Cdc48 subfamily) CEW88_RS01980 PF00753 Metallo-beta-lactamase superfamily CEW88_RS01980 PF16123 Hydroxyacylglutathione hydrolase C-terminus CEW88_RS01985 PF08241 Methyltransferase domain CEW88_RS01990 PF00213 ATP synthase delta (OSCP) subunit CEW88_RS01995 PF00306 ATP synthase alpha/beta chain, C terminal domain CEW88_RS01995 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW88_RS01995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS02000 PF00231 ATP synthase CEW88_RS02005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS02005 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW88_RS02010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEW88_RS02015 PF09458 H-type lectin domain CEW88_RS02030 PF14572 Phosphoribosyl synthetase-associated domain CEW88_RS02030 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CEW88_RS02040 PF02660 Glycerol-3-phosphate acyltransferase CEW88_RS02045 PF01979 Amidohydrolase family CEW88_RS02055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEW88_RS02055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEW88_RS02065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS02065 PF14759 Reductase C-terminal CEW88_RS02070 PF00462 Glutaredoxin CEW88_RS02070 PF08534 Redoxin CEW88_RS02075 PF01329 Pterin 4 alpha carbinolamine dehydratase CEW88_RS02085 PF03009 Glycerophosphoryl diester phosphodiesterase family CEW88_RS02095 PF00529 HlyD membrane-fusion protein of T1SS CEW88_RS02095 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS02100 PF00005 ABC transporter CEW88_RS02100 PF00664 ABC transporter transmembrane region CEW88_RS02105 PF04333 MlaA lipoprotein CEW88_RS02115 PF17871 AAA lid domain CEW88_RS02115 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS02115 PF07724 AAA domain (Cdc48 subfamily) CEW88_RS02115 PF02861 Clp amino terminal domain, pathogenicity island component CEW88_RS02115 PF10431 C-terminal, D2-small domain, of ClpB protein CEW88_RS02120 PF02469 Fasciclin domain CEW88_RS02125 PF01645 Conserved region in glutamate synthase CEW88_RS02130 PF00174 Oxidoreductase molybdopterin binding domain CEW88_RS02135 PF01794 Ferric reductase like transmembrane component CEW88_RS02185 PF00467 KOW motif CEW88_RS02185 PF02357 Transcription termination factor nusG CEW88_RS02190 PF00298 Ribosomal protein L11, RNA binding domain CEW88_RS02190 PF03946 Ribosomal protein L11, N-terminal domain CEW88_RS02195 PF00687 Ribosomal protein L1p/L10e family CEW88_RS02205 PF00466 Ribosomal protein L10 CEW88_RS02210 PF00542 Ribosomal protein L7/L12 C-terminal domain CEW88_RS02210 PF16320 Ribosomal protein L7/L12 dimerisation domain CEW88_RS02215 PF00562 RNA polymerase Rpb2, domain 6 CEW88_RS02215 PF04563 RNA polymerase beta subunit CEW88_RS02215 PF04561 RNA polymerase Rpb2, domain 2 CEW88_RS02215 PF04565 RNA polymerase Rpb2, domain 3 CEW88_RS02215 PF10385 RNA polymerase beta subunit external 1 domain CEW88_RS02215 PF04560 RNA polymerase Rpb2, domain 7 CEW88_RS02220 PF04983 RNA polymerase Rpb1, domain 3 CEW88_RS02220 PF04997 RNA polymerase Rpb1, domain 1 CEW88_RS02220 PF04998 RNA polymerase Rpb1, domain 5 CEW88_RS02220 PF00623 RNA polymerase Rpb1, domain 2 CEW88_RS02220 PF05000 RNA polymerase Rpb1, domain 4 CEW88_RS02235 PF00164 Ribosomal protein S12/S23 CEW88_RS02240 PF00177 Ribosomal protein S7p/S5e CEW88_RS02245 PF03764 Elongation factor G, domain IV CEW88_RS02245 PF00009 Elongation factor Tu GTP binding domain CEW88_RS02245 PF03144 Elongation factor Tu domain 2 CEW88_RS02245 PF00679 Elongation factor G C-terminus CEW88_RS02245 PF14492 Elongation Factor G, domain II CEW88_RS02250 PF03143 Elongation factor Tu C-terminal domain CEW88_RS02250 PF03144 Elongation factor Tu domain 2 CEW88_RS02250 PF00009 Elongation factor Tu GTP binding domain CEW88_RS02255 PF00338 Ribosomal protein S10p/S20e CEW88_RS02260 PF00297 Ribosomal protein L3 CEW88_RS02265 PF00573 Ribosomal protein L4/L1 family CEW88_RS02270 PF00276 Ribosomal protein L23 CEW88_RS02275 PF00181 Ribosomal Proteins L2, RNA binding domain CEW88_RS02275 PF03947 Ribosomal Proteins L2, C-terminal domain CEW88_RS02280 PF00203 Ribosomal protein S19 CEW88_RS02285 PF00237 Ribosomal protein L22p/L17e CEW88_RS02290 PF07650 KH domain CEW88_RS02290 PF00189 Ribosomal protein S3, C-terminal domain CEW88_RS02295 PF00252 Ribosomal protein L16p/L10e CEW88_RS02305 PF00831 Ribosomal L29 protein CEW88_RS02310 PF00366 Ribosomal protein S17 CEW88_RS02315 PF00238 Ribosomal protein L14p/L23e CEW88_RS02320 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CEW88_RS02320 PF00467 KOW motif CEW88_RS02325 PF00281 Ribosomal protein L5 CEW88_RS02325 PF00673 ribosomal L5P family C-terminus CEW88_RS02330 PF00253 Ribosomal protein S14p/S29e CEW88_RS02335 PF00410 Ribosomal protein S8 CEW88_RS02340 PF00347 Ribosomal protein L6 CEW88_RS02345 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CEW88_RS02350 PF00333 Ribosomal protein S5, N-terminal domain CEW88_RS02350 PF03719 Ribosomal protein S5, C-terminal domain CEW88_RS02355 PF00327 Ribosomal protein L30p/L7e CEW88_RS02360 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CEW88_RS02365 PF00344 SecY translocase CEW88_RS02370 PF05191 Adenylate kinase, active site lid CEW88_RS02380 PF00416 Ribosomal protein S13/S18 CEW88_RS02385 PF00411 Ribosomal protein S11 CEW88_RS02390 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CEW88_RS02390 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CEW88_RS02390 PF01000 RNA polymerase Rpb3/RpoA insert domain CEW88_RS02395 PF01196 Ribosomal protein L17 CEW88_RS02400 PF00107 Zinc-binding dehydrogenase CEW88_RS02400 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS02405 PF07885 Ion channel CEW88_RS02420 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS02430 PF01612 3'-5' exonuclease CEW88_RS02430 PF00476 DNA polymerase family A CEW88_RS02430 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CEW88_RS02430 PF01367 5'-3' exonuclease, C-terminal SAM fold CEW88_RS02435 PF00294 pfkB family carbohydrate kinase CEW88_RS02440 PF10576 Iron-sulfur binding domain of endonuclease III CEW88_RS02440 PF00633 Helix-hairpin-helix motif CEW88_RS02440 PF00730 HhH-GPD superfamily base excision DNA repair protein CEW88_RS02445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CEW88_RS02445 PF12833 Helix-turn-helix domain CEW88_RS02445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CEW88_RS02445 PF02805 Metal binding domain of Ada CEW88_RS02450 PF00691 OmpA family CEW88_RS02450 PF00223 Photosystem I psaA/psaB protein CEW88_RS02455 PF02397 Bacterial sugar transferase CEW88_RS02460 PF01612 3'-5' exonuclease CEW88_RS02460 PF00570 HRDC domain CEW88_RS02475 PF00005 ABC transporter CEW88_RS02480 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CEW88_RS02480 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CEW88_RS02485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CEW88_RS02510 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS02515 PF00483 Nucleotidyl transferase CEW88_RS02525 PF00459 Inositol monophosphatase family CEW88_RS02540 PF13532 2OG-Fe(II) oxygenase superfamily CEW88_RS02545 PF00012 Hsp70 protein CEW88_RS02550 PF00684 DnaJ central domain CEW88_RS02550 PF00226 DnaJ domain CEW88_RS02550 PF01556 DnaJ C terminal domain CEW88_RS02555 PF04002 RadC-like JAB domain CEW88_RS02560 PF12849 PBP superfamily domain CEW88_RS02570 PF01043 SecA preprotein cross-linking domain CEW88_RS02570 PF02810 SEC-C motif CEW88_RS02570 PF07517 SecA DEAD-like domain CEW88_RS02570 PF07516 SecA Wing and Scaffold domain CEW88_RS02580 PF01960 ArgJ family CEW88_RS02585 PF00293 NUDIX domain CEW88_RS02590 PF11987 Translation-initiation factor 2 CEW88_RS02590 PF04760 Translation initiation factor IF-2, N-terminal region CEW88_RS02590 PF00009 Elongation factor Tu GTP binding domain CEW88_RS02590 PF08364 Bacterial translation initiation factor IF-2 associated region CEW88_RS02600 PF00575 S1 RNA binding domain CEW88_RS02600 PF08529 NusA N-terminal domain CEW88_RS02600 PF13184 NusA-like KH domain CEW88_RS02605 PF17384 RimP C-terminal SH3 domain CEW88_RS02605 PF02576 RimP N-terminal domain CEW88_RS02610 PF10005 zinc-ribbon domain CEW88_RS02610 PF15887 Putative zinc-binding metallo-peptidase CEW88_RS02620 PF01047 MarR family CEW88_RS02630 PF08544 GHMP kinases C terminal CEW88_RS02635 PF00348 Polyprenyl synthetase CEW88_RS02655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS02665 PF02803 Thiolase, C-terminal domain CEW88_RS02665 PF00108 Thiolase, N-terminal domain CEW88_RS02675 PF00163 Ribosomal protein S4/S9 N-terminal domain CEW88_RS02675 PF01479 S4 domain CEW88_RS02680 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEW88_RS02680 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS02685 PF01180 Dihydroorotate dehydrogenase CEW88_RS02690 PF08362 YcdC-like protein, C-terminal region CEW88_RS02690 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS02695 PF01546 Peptidase family M20/M25/M40 CEW88_RS02695 PF07687 Peptidase dimerisation domain CEW88_RS02700 PF01979 Amidohydrolase family CEW88_RS02705 PF00005 ABC transporter CEW88_RS02715 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS02720 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS02725 PF09084 NMT1/THI5 like CEW88_RS02740 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEW88_RS02740 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS02750 PF01757 Acyltransferase family CEW88_RS02760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS02760 PF03466 LysR substrate binding domain CEW88_RS02765 PF00005 ABC transporter CEW88_RS02765 PF02687 FtsX-like permease family CEW88_RS02765 PF12704 MacB-like periplasmic core domain CEW88_RS02785 PF01790 Prolipoprotein diacylglyceryl transferase CEW88_RS02795 PF02578 Multi-copper polyphenol oxidoreductase laccase CEW88_RS02805 PF01037 Lrp/AsnC ligand binding domain CEW88_RS02810 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS02830 PF00011 Hsp20/alpha crystallin family CEW88_RS02840 PF03807 NADP oxidoreductase coenzyme F420-dependent CEW88_RS02840 PF14748 Pyrroline-5-carboxylate reductase dimerisation CEW88_RS02845 PF01588 Putative tRNA binding domain CEW88_RS02850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS02850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS02855 PF00265 Thymidine kinase CEW88_RS02870 PF18693 TRAM domain CEW88_RS02870 PF04055 Radical SAM superfamily CEW88_RS02870 PF00919 Uncharacterized protein family UPF0004 CEW88_RS02875 PF03600 Citrate transporter CEW88_RS02875 PF02080 TrkA-C domain CEW88_RS02885 PF01061 ABC-2 type transporter CEW88_RS02890 PF01066 CDP-alcohol phosphatidyltransferase CEW88_RS02900 PF00919 Uncharacterized protein family UPF0004 CEW88_RS02900 PF04055 Radical SAM superfamily CEW88_RS02905 PF01678 Diaminopimelate epimerase CEW88_RS02925 PF01943 Polysaccharide biosynthesis protein CEW88_RS02950 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS02960 PF02397 Bacterial sugar transferase CEW88_RS02975 PF13439 Glycosyltransferase Family 4 CEW88_RS02975 PF00534 Glycosyl transferases group 1 CEW88_RS02990 PF12806 Acetyl-CoA dehydrogenase C-terminal like CEW88_RS02990 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS02990 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS02990 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS03000 PF00501 AMP-binding enzyme CEW88_RS03000 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS03005 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS03010 PF00106 short chain dehydrogenase CEW88_RS03015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS03025 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS03030 PF12802 MarR family CEW88_RS03035 PF01494 FAD binding domain CEW88_RS03035 PF07976 Phenol hydroxylase, C-terminal dimerisation domain CEW88_RS03040 PF01047 MarR family CEW88_RS03045 PF04273 Putative phosphatase (DUF442) CEW88_RS03045 PF00753 Metallo-beta-lactamase superfamily CEW88_RS03050 PF01613 Flavin reductase like domain CEW88_RS03055 PF00881 Nitroreductase family CEW88_RS03060 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CEW88_RS03060 PF01588 Putative tRNA binding domain CEW88_RS03060 PF03147 Ferredoxin-fold anticodon binding domain CEW88_RS03060 PF03483 B3/4 domain CEW88_RS03060 PF03484 tRNA synthetase B5 domain CEW88_RS03065 PF02627 Carboxymuconolactone decarboxylase family CEW88_RS03070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS03070 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS03070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS03100 PF00149 Calcineurin-like phosphoesterase CEW88_RS03115 PF00535 Glycosyl transferase family 2 CEW88_RS03120 PF01066 CDP-alcohol phosphatidyltransferase CEW88_RS03125 PF00313 'Cold-shock' DNA-binding domain CEW88_RS03135 PF00005 ABC transporter CEW88_RS03135 PF12848 ABC transporter CEW88_RS03140 PF01467 Cytidylyltransferase-like CEW88_RS03155 PF01921 tRNA synthetases class I (K) CEW88_RS03160 PF13229 Right handed beta helix region CEW88_RS03160 PF12708 Pectate lyase superfamily protein CEW88_RS03160 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CEW88_RS03170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW88_RS03180 PF00923 Transaldolase/Fructose-6-phosphate aldolase CEW88_RS03185 PF00270 DEAD/DEAH box helicase CEW88_RS03185 PF17764 3′ DNA-binding domain (3′BD) CEW88_RS03185 PF18074 Primosomal protein N C-terminal domain CEW88_RS03185 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CEW88_RS03190 PF01037 Lrp/AsnC ligand binding domain CEW88_RS03190 PF13404 AsnC-type helix-turn-helix domain CEW88_RS03200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW88_RS03200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS03205 PF13380 CoA binding domain CEW88_RS03210 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CEW88_RS03215 PF00977 Histidine biosynthesis protein CEW88_RS03220 PF02872 5'-nucleotidase, C-terminal domain CEW88_RS03220 PF00149 Calcineurin-like phosphoesterase CEW88_RS03235 PF01180 Dihydroorotate dehydrogenase CEW88_RS03240 PF03960 ArsC family CEW88_RS03245 PF01170 Putative RNA methylase family UPF0020 CEW88_RS03245 PF10672 S-adenosylmethionine-dependent methyltransferase CEW88_RS03245 PF02926 THUMP domain CEW88_RS03255 PF00977 Histidine biosynthesis protein CEW88_RS03260 PF00117 Glutamine amidotransferase class-I CEW88_RS03265 PF00475 Imidazoleglycerol-phosphate dehydratase CEW88_RS03285 PF13361 UvrD-like helicase C-terminal domain CEW88_RS03285 PF00580 UvrD/REP helicase N-terminal domain CEW88_RS03290 PF00289 Biotin carboxylase, N-terminal domain CEW88_RS03290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW88_RS03290 PF02785 Biotin carboxylase C-terminal domain CEW88_RS03290 PF02436 Conserved carboxylase domain CEW88_RS03290 PF00682 HMGL-like CEW88_RS03290 PF00364 Biotin-requiring enzyme CEW88_RS03300 PF01575 MaoC like domain CEW88_RS03325 PF00391 PEP-utilising enzyme, mobile domain CEW88_RS03325 PF05524 PEP-utilising enzyme, N-terminal CEW88_RS03325 PF02896 PEP-utilising enzyme, TIM barrel domain CEW88_RS03330 PF01842 ACT domain CEW88_RS03330 PF13840 ACT domain CEW88_RS03330 PF00696 Amino acid kinase family CEW88_RS03350 PF00534 Glycosyl transferases group 1 CEW88_RS03350 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEW88_RS03355 PF08032 RNA 2'-O ribose methyltransferase substrate binding CEW88_RS03355 PF00588 SpoU rRNA Methylase family CEW88_RS03365 PF00925 GTP cyclohydrolase II CEW88_RS03365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CEW88_RS03370 PF00885 6,7-dimethyl-8-ribityllumazine synthase CEW88_RS03375 PF01029 NusB family CEW88_RS03420 PF00849 RNA pseudouridylate synthase CEW88_RS03425 PF04545 Sigma-70, region 4 CEW88_RS03425 PF00140 Sigma-70 factor, region 1.2 CEW88_RS03425 PF04542 Sigma-70 region 2 CEW88_RS03430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS03430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS03440 PF00892 EamA-like transporter family CEW88_RS03445 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEW88_RS03450 PF01266 FAD dependent oxidoreductase CEW88_RS03455 PF00120 Glutamine synthetase, catalytic domain CEW88_RS03460 PF00117 Glutamine amidotransferase class-I CEW88_RS03460 PF02540 NAD synthase CEW88_RS03460 PF00958 GMP synthase C terminal domain CEW88_RS03465 PF00120 Glutamine synthetase, catalytic domain CEW88_RS03470 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS03475 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS03480 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS03485 PF00005 ABC transporter CEW88_RS03500 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CEW88_RS03510 PF06418 CTP synthase N-terminus CEW88_RS03510 PF00117 Glutamine amidotransferase class-I CEW88_RS03540 PF01343 Peptidase family S49 CEW88_RS03540 PF06965 Na+/H+ antiporter 1 CEW88_RS03550 PF01699 Sodium/calcium exchanger protein CEW88_RS03560 PF08459 UvrC Helix-hairpin-helix N-terminal CEW88_RS03560 PF12826 Helix-hairpin-helix motif CEW88_RS03560 PF01541 GIY-YIG catalytic domain CEW88_RS03560 PF02151 UvrB/uvrC motif CEW88_RS03565 PF01118 Semialdehyde dehydrogenase, NAD binding domain CEW88_RS03570 PF01926 50S ribosome-binding GTPase CEW88_RS03570 PF06071 Protein of unknown function (DUF933) CEW88_RS03575 PF01554 MatE CEW88_RS03595 PF03976 Polyphosphate kinase 2 (PPK2) CEW88_RS03605 PF00290 Tryptophan synthase alpha chain CEW88_RS03615 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW88_RS03615 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW88_RS03620 PF17042 Nucleotide-binding C-terminal domain CEW88_RS03620 PF07005 Sugar-binding N-terminal domain CEW88_RS03625 PF00596 Class II Aldolase and Adducin N-terminal domain CEW88_RS03630 PF01261 Xylose isomerase-like TIM barrel CEW88_RS03635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS03635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS03645 PF00294 pfkB family carbohydrate kinase CEW88_RS03655 PF02913 FAD linked oxidases, C-terminal domain CEW88_RS03655 PF01565 FAD binding domain CEW88_RS03660 PF00701 Dihydrodipicolinate synthetase family CEW88_RS03675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW88_RS03675 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW88_RS03680 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS03695 PF00920 Dehydratase family CEW88_RS03705 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS03710 PF00892 EamA-like transporter family CEW88_RS03715 PF08666 SAF domain CEW88_RS03715 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CEW88_RS03720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS03730 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS03735 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS03735 PF07729 FCD domain CEW88_RS03795 PF18011 C-terminal domain found in long catalases CEW88_RS03795 PF06628 Catalase-related immune-responsive CEW88_RS03795 PF00199 Catalase CEW88_RS03805 PF00535 Glycosyl transferase family 2 CEW88_RS03815 PF03466 LysR substrate binding domain CEW88_RS03815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS03825 PF03631 Virulence factor BrkB CEW88_RS03850 PF01270 Glycosyl hydrolases family 8 CEW88_RS03860 PF07238 PilZ domain CEW88_RS03860 PF03552 Cellulose synthase CEW88_RS03860 PF00535 Glycosyl transferase family 2 CEW88_RS03875 PF00970 Oxidoreductase FAD-binding domain CEW88_RS03875 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS03875 PF00175 Oxidoreductase NAD-binding domain CEW88_RS03885 PF13194 Domain of unknown function (DUF4010) CEW88_RS03890 PF00689 Cation transporting ATPase, C-terminus CEW88_RS03890 PF00690 Cation transporter/ATPase, N-terminus CEW88_RS03900 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS03900 PF00072 Response regulator receiver domain CEW88_RS03905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS03920 PF00884 Sulfatase CEW88_RS03920 PF16347 Domain of unknown function (DUF4976) CEW88_RS03930 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS03935 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS03935 PF01799 [2Fe-2S] binding domain CEW88_RS03945 PF01032 FecCD transport family CEW88_RS03950 PF00005 ABC transporter CEW88_RS03960 PF01037 Lrp/AsnC ligand binding domain CEW88_RS03970 PF13454 FAD-NAD(P)-binding CEW88_RS03995 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS04000 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS04005 PF08402 TOBE domain CEW88_RS04005 PF00005 ABC transporter CEW88_RS04020 PF00581 Rhodanese-like domain CEW88_RS04025 PF00586 AIR synthase related protein, N-terminal domain CEW88_RS04025 PF02769 AIR synthase related protein, C-terminal domain CEW88_RS04030 PF13409 Glutathione S-transferase, N-terminal domain CEW88_RS04035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS04040 PF03466 LysR substrate binding domain CEW88_RS04040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS04045 PF03099 Biotin/lipoate A/B protein ligase family CEW88_RS04065 PF09334 tRNA synthetases class I (M) CEW88_RS04070 PF00230 Major intrinsic protein CEW88_RS04075 PF00248 Aldo/keto reductase family CEW88_RS04080 PF02390 Putative methyltransferase CEW88_RS04125 PF00437 Type II/IV secretion system protein CEW88_RS04130 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW88_RS04140 PF04972 BON domain CEW88_RS04140 PF00263 Bacterial type II and III secretion system protein CEW88_RS04140 PF13629 Pilus formation protein N terminal region CEW88_RS04155 PF01464 Transglycosylase SLT domain CEW88_RS04160 PF00271 Helicase conserved C-terminal domain CEW88_RS04160 PF04408 Helicase associated domain (HA2) CEW88_RS04160 PF00270 DEAD/DEAH box helicase CEW88_RS04160 PF08482 ATP-dependent helicase C-terminal CEW88_RS04190 PF00830 Ribosomal L28 family CEW88_RS04195 PF04314 Copper chaperone PCu(A)C CEW88_RS04200 PF02146 Sir2 family CEW88_RS04205 PF01451 Low molecular weight phosphotyrosine protein phosphatase CEW88_RS04215 PF00133 tRNA synthetases class I (I, L, M and V) CEW88_RS04215 PF08264 Anticodon-binding domain of tRNA CEW88_RS04220 PF05128 Domain of unknown function (DUF697) CEW88_RS04230 PF04317 YcjX-like family, DUF463 CEW88_RS04235 PF01416 tRNA pseudouridine synthase CEW88_RS04240 PF00202 Aminotransferase class-III CEW88_RS04245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CEW88_RS04245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CEW88_RS04250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CEW88_RS04250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW88_RS04265 PF02913 FAD linked oxidases, C-terminal domain CEW88_RS04265 PF01565 FAD binding domain CEW88_RS04275 PF01266 FAD dependent oxidoreductase CEW88_RS04285 PF00465 Iron-containing alcohol dehydrogenase CEW88_RS04290 PF00171 Aldehyde dehydrogenase family CEW88_RS04295 PF00120 Glutamine synthetase, catalytic domain CEW88_RS04295 PF03951 Glutamine synthetase, beta-Grasp domain CEW88_RS04300 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS04305 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS04320 PF01580 FtsK/SpoIIIE family CEW88_RS04320 PF09397 Ftsk gamma domain CEW88_RS04320 PF17854 FtsK alpha domain CEW88_RS04325 PF05853 beta-keto acid cleavage enzyme CEW88_RS04330 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS04330 PF07729 FCD domain CEW88_RS04340 PF08241 Methyltransferase domain CEW88_RS04360 PF06421 GTP-binding protein LepA C-terminus CEW88_RS04360 PF03144 Elongation factor Tu domain 2 CEW88_RS04360 PF00679 Elongation factor G C-terminus CEW88_RS04360 PF00009 Elongation factor Tu GTP binding domain CEW88_RS04370 PF00815 Histidinol dehydrogenase CEW88_RS04375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS04375 PF03466 LysR substrate binding domain CEW88_RS04380 PF12697 Alpha/beta hydrolase family CEW88_RS04405 PF04542 Sigma-70 region 2 CEW88_RS04405 PF08281 Sigma-70, region 4 CEW88_RS04420 PF00990 Diguanylate cyclase, GGDEF domain CEW88_RS04420 PF00072 Response regulator receiver domain CEW88_RS04440 PF00563 EAL domain CEW88_RS04440 PF03707 Bacterial signalling protein N terminal repeat CEW88_RS04440 PF00990 Diguanylate cyclase, GGDEF domain CEW88_RS04495 PF01431 Peptidase family M13 CEW88_RS04495 PF05649 Peptidase family M13 CEW88_RS04500 PF01926 50S ribosome-binding GTPase CEW88_RS04505 PF10396 GTP-binding protein TrmE N-terminus CEW88_RS04505 PF01926 50S ribosome-binding GTPase CEW88_RS04505 PF12631 MnmE helical domain CEW88_RS04515 PF00072 Response regulator receiver domain CEW88_RS04520 PF03061 Thioesterase superfamily CEW88_RS04525 PF05336 L-rhamnose mutarotase CEW88_RS04535 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW88_RS04550 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS04560 PF13277 YmdB-like protein CEW88_RS04570 PF02080 TrkA-C domain CEW88_RS04570 PF03600 Citrate transporter CEW88_RS04575 PF01709 Transcriptional regulator CEW88_RS04605 PF00561 alpha/beta hydrolase fold CEW88_RS04615 PF00471 Ribosomal protein L33 CEW88_RS04625 PF04715 Anthranilate synthase component I, N terminal region CEW88_RS04625 PF00425 chorismate binding enzyme CEW88_RS04625 PF00117 Glutamine amidotransferase class-I CEW88_RS04635 PF01027 Inhibitor of apoptosis-promoting Bax1 CEW88_RS04645 PF03466 LysR substrate binding domain CEW88_RS04645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS04650 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW88_RS04650 PF08659 KR domain CEW88_RS04650 PF00550 Phosphopantetheine attachment site CEW88_RS04650 PF00107 Zinc-binding dehydrogenase CEW88_RS04650 PF16197 Ketoacyl-synthetase C-terminal extension CEW88_RS04650 PF00698 Acyl transferase domain CEW88_RS04650 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS04650 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW88_RS04650 PF14765 Polyketide synthase dehydratase CEW88_RS04655 PF01381 Helix-turn-helix CEW88_RS04660 PF00459 Inositol monophosphatase family CEW88_RS04665 PF01979 Amidohydrolase family CEW88_RS04680 PF01979 Amidohydrolase family CEW88_RS04685 PF00571 CBS domain CEW88_RS04685 PF01769 Divalent cation transporter CEW88_RS04685 PF03448 MgtE intracellular N domain CEW88_RS04690 PF01812 5-formyltetrahydrofolate cyclo-ligase family CEW88_RS04695 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CEW88_RS04695 PF02843 Phosphoribosylglycinamide synthetase, C domain CEW88_RS04695 PF02844 Phosphoribosylglycinamide synthetase, N domain CEW88_RS04700 PF13742 OB-fold nucleic acid binding domain CEW88_RS04700 PF02601 Exonuclease VII, large subunit CEW88_RS04710 PF14718 Soluble lytic murein transglycosylase L domain CEW88_RS04710 PF01464 Transglycosylase SLT domain CEW88_RS04715 PF02881 SRP54-type protein, helical bundle domain CEW88_RS04715 PF00448 SRP54-type protein, GTPase domain CEW88_RS04720 PF02308 MgtC family CEW88_RS04725 PF04279 Intracellular septation protein A CEW88_RS04730 PF07690 Major Facilitator Superfamily CEW88_RS04730 PF00083 Sugar (and other) transporter CEW88_RS04740 PF00709 Adenylosuccinate synthetase CEW88_RS04755 PF01026 TatD related DNase CEW88_RS04890 PF03237 Terminase-like family CEW88_RS04925 PF10124 Mu-like prophage major head subunit gpT CEW88_RS04990 PF02381 MraZ protein, putative antitoxin-like CEW88_RS04995 PF01795 MraW methylase family CEW88_RS05005 PF00905 Penicillin binding protein transpeptidase domain CEW88_RS05005 PF03717 Penicillin-binding Protein dimerisation domain CEW88_RS05010 PF01225 Mur ligase family, catalytic domain CEW88_RS05010 PF02875 Mur ligase family, glutamate ligase domain CEW88_RS05010 PF08245 Mur ligase middle domain CEW88_RS05015 PF02875 Mur ligase family, glutamate ligase domain CEW88_RS05015 PF01225 Mur ligase family, catalytic domain CEW88_RS05015 PF08245 Mur ligase middle domain CEW88_RS05020 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CEW88_RS05020 PF00953 Glycosyl transferase family 4 CEW88_RS05025 PF08245 Mur ligase middle domain CEW88_RS05025 PF02875 Mur ligase family, glutamate ligase domain CEW88_RS05040 PF01098 Cell cycle protein CEW88_RS05045 PF04101 Glycosyltransferase family 28 C-terminal domain CEW88_RS05045 PF03033 Glycosyltransferase family 28 N-terminal domain CEW88_RS05050 PF08245 Mur ligase middle domain CEW88_RS05050 PF02875 Mur ligase family, glutamate ligase domain CEW88_RS05050 PF01225 Mur ligase family, catalytic domain CEW88_RS05065 PF01565 FAD binding domain CEW88_RS05065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CEW88_RS05070 PF07478 D-ala D-ala ligase C-terminus CEW88_RS05070 PF01820 D-ala D-ala ligase N-terminus CEW88_RS05075 PF03799 Cell division protein FtsQ CEW88_RS05080 PF02491 SHS2 domain inserted in FTSA CEW88_RS05085 PF00091 Tubulin/FtsZ family, GTPase domain CEW88_RS05085 PF12327 FtsZ family, C-terminal domain CEW88_RS05090 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CEW88_RS05095 PF13525 Outer membrane lipoprotein CEW88_RS05100 PF02463 RecF/RecN/SMC N terminal domain CEW88_RS05105 PF10458 Valyl tRNA synthetase tRNA binding arm CEW88_RS05105 PF08264 Anticodon-binding domain of tRNA CEW88_RS05105 PF00133 tRNA synthetases class I (I, L, M and V) CEW88_RS05115 PF10609 NUBPL iron-transfer P-loop NTPase CEW88_RS05120 PF09115 DNA polymerase III, delta subunit, C terminal CEW88_RS05125 PF02223 Thymidylate kinase CEW88_RS05130 PF07943 Penicillin-binding protein 5, C-terminal domain CEW88_RS05130 PF00768 D-alanyl-D-alanine carboxypeptidase CEW88_RS05145 PF00072 Response regulator receiver domain CEW88_RS05145 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS05150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS05150 PF00529 HlyD membrane-fusion protein of T1SS CEW88_RS05155 PF00005 ABC transporter CEW88_RS05155 PF00664 ABC transporter transmembrane region CEW88_RS05180 PF17092 Penicillin-binding protein OB-like domain CEW88_RS05180 PF00905 Penicillin binding protein transpeptidase domain CEW88_RS05180 PF00912 Transglycosylase CEW88_RS05185 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS05185 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS05195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS05200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS05200 PF00005 ABC transporter CEW88_RS05205 PF05209 Septum formation inhibitor MinC, N-terminal domain CEW88_RS05205 PF03775 Septum formation inhibitor MinC, C-terminal domain CEW88_RS05210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW88_RS05215 PF03776 Septum formation topological specificity factor MinE CEW88_RS05220 PF00012 Hsp70 protein CEW88_RS05225 PF01546 Peptidase family M20/M25/M40 CEW88_RS05225 PF07687 Peptidase dimerisation domain CEW88_RS05230 PF01266 FAD dependent oxidoreductase CEW88_RS05235 PF07687 Peptidase dimerisation domain CEW88_RS05235 PF01546 Peptidase family M20/M25/M40 CEW88_RS05245 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS05245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS05245 PF08521 Two-component sensor kinase N-terminal CEW88_RS05250 PF00072 Response regulator receiver domain CEW88_RS05250 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS05265 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS05275 PF03551 Transcriptional regulator PadR-like family CEW88_RS05285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW88_RS05285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW88_RS05295 PF00873 AcrB/AcrD/AcrF family CEW88_RS05300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS05305 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS05315 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS05320 PF01370 NAD dependent epimerase/dehydratase family CEW88_RS05325 PF00701 Dihydrodipicolinate synthetase family CEW88_RS05330 PF13378 Enolase C-terminal domain-like CEW88_RS05330 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEW88_RS05335 PF04909 Amidohydrolase CEW88_RS05345 PF07470 Glycosyl Hydrolase Family 88 CEW88_RS05350 PF00295 Glycosyl hydrolases family 28 CEW88_RS05355 PF01547 Bacterial extracellular solute-binding protein CEW88_RS05360 PF00005 ABC transporter CEW88_RS05360 PF08402 TOBE domain CEW88_RS05365 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS05370 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS05385 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS05385 PF07729 FCD domain CEW88_RS05390 PF04962 KduI/IolB family CEW88_RS05435 PF01933 Uncharacterised protein family UPF0052 CEW88_RS05455 PF04143 Sulphur transport CEW88_RS05460 PF00753 Metallo-beta-lactamase superfamily CEW88_RS05470 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS05470 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS05470 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS05480 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CEW88_RS05490 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS05505 PF00551 Formyl transferase CEW88_RS05510 PF00128 Alpha amylase, catalytic domain CEW88_RS05515 PF09335 SNARE associated Golgi protein CEW88_RS05535 PF02219 Methylenetetrahydrofolate reductase CEW88_RS05540 PF03466 LysR substrate binding domain CEW88_RS05540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS05545 PF00313 'Cold-shock' DNA-binding domain CEW88_RS05550 PF03960 ArsC family CEW88_RS05555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEW88_RS05555 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW88_RS05555 PF02824 TGS domain CEW88_RS05555 PF03129 Anticodon binding domain CEW88_RS05570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS05570 PF03466 LysR substrate binding domain CEW88_RS05575 PF01810 LysE type translocator CEW88_RS05580 PF00892 EamA-like transporter family CEW88_RS05600 PF00255 Glutathione peroxidase CEW88_RS05605 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEW88_RS05620 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain CEW88_RS05620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CEW88_RS05620 PF01276 Orn/Lys/Arg decarboxylase, major domain CEW88_RS05625 PF01068 ATP dependent DNA ligase domain CEW88_RS05625 PF04675 DNA ligase N terminus CEW88_RS05625 PF04679 ATP dependent DNA ligase C terminal region CEW88_RS05655 PF01479 S4 domain CEW88_RS05660 PF00037 4Fe-4S binding domain CEW88_RS05660 PF11953 Domain of unknown function (DUF3470) CEW88_RS05665 PF02559 CarD-like/TRCF domain CEW88_RS05670 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS05675 PF02254 TrkA-N domain CEW88_RS05675 PF00999 Sodium/hydrogen exchanger family CEW88_RS05680 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW88_RS05685 PF02649 Type I GTP cyclohydrolase folE2 CEW88_RS05695 PF02386 Cation transport protein CEW88_RS05700 PF01565 FAD binding domain CEW88_RS05700 PF02913 FAD linked oxidases, C-terminal domain CEW88_RS05705 PF00654 Voltage gated chloride channel CEW88_RS05710 PF02566 OsmC-like protein CEW88_RS05715 PF01047 MarR family CEW88_RS05725 PF01321 Creatinase/Prolidase N-terminal domain CEW88_RS05725 PF00557 Metallopeptidase family M24 CEW88_RS05730 PF06213 Cobalamin biosynthesis protein CobT CEW88_RS05730 PF11775 Cobalamin biosynthesis protein CobT VWA domain CEW88_RS05745 PF12556 Cobaltochelatase CobS subunit N terminal CEW88_RS05745 PF08406 CbbQ/NirQ/NorQ C-terminal CEW88_RS05745 PF07728 AAA domain (dynein-related subfamily) CEW88_RS05760 PF01641 SelR domain CEW88_RS05765 PF00226 DnaJ domain CEW88_RS05770 PF01722 BolA-like protein CEW88_RS05780 PF03594 Benzoate membrane transport protein CEW88_RS05785 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEW88_RS05785 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEW88_RS05805 PF04349 Periplasmic glucan biosynthesis protein, MdoG CEW88_RS05810 PF02934 GatB/GatE catalytic domain CEW88_RS05810 PF02637 GatB domain CEW88_RS05830 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CEW88_RS05830 PF11940 Domain of unknown function (DUF3458) Ig-like fold CEW88_RS05830 PF01433 Peptidase family M1 domain CEW88_RS05845 PF00873 AcrB/AcrD/AcrF family CEW88_RS05870 PF00202 Aminotransferase class-III CEW88_RS05875 PF00850 Histone deacetylase domain CEW88_RS05885 PF04403 Paraquat-inducible protein A CEW88_RS05890 PF02470 MlaD protein CEW88_RS05905 PF16326 ABC transporter C-terminal domain CEW88_RS05905 PF00005 ABC transporter CEW88_RS05910 PF00929 Exonuclease CEW88_RS05925 PF00474 Sodium:solute symporter family CEW88_RS05935 PF05191 Adenylate kinase, active site lid CEW88_RS05940 PF16177 Acetyl-coenzyme A synthetase N-terminus CEW88_RS05940 PF00501 AMP-binding enzyme CEW88_RS05940 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS05950 PF07043 Protein of unknown function (DUF1328) CEW88_RS05955 PF00072 Response regulator receiver domain CEW88_RS05965 PF04542 Sigma-70 region 2 CEW88_RS05965 PF08281 Sigma-70, region 4 CEW88_RS05970 PF12282 Signal transduction histidine kinase CEW88_RS05970 PF07568 Histidine kinase CEW88_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS05980 PF07722 Peptidase C26 CEW88_RS05990 PF00171 Aldehyde dehydrogenase family CEW88_RS05995 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CEW88_RS05995 PF01926 50S ribosome-binding GTPase CEW88_RS06010 PF02403 Seryl-tRNA synthetase N-terminal domain CEW88_RS06010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEW88_RS06015 PF00089 Trypsin CEW88_RS06020 PF02699 Preprotein translocase subunit CEW88_RS06025 PF02355 Protein export membrane protein CEW88_RS06030 PF02355 Protein export membrane protein CEW88_RS06030 PF07549 SecD/SecF GG Motif CEW88_RS06035 PF04430 Protein of unknown function (DUF498/DUF598) CEW88_RS06040 PF00005 ABC transporter CEW88_RS06045 PF03379 CcmB protein CEW88_RS06050 PF01578 Cytochrome C assembly protein CEW88_RS06055 PF04995 Heme exporter protein D (CcmD) CEW88_RS06060 PF08534 Redoxin CEW88_RS06090 PF00120 Glutamine synthetase, catalytic domain CEW88_RS06090 PF03951 Glutamine synthetase, beta-Grasp domain CEW88_RS06095 PF00543 Nitrogen regulatory protein P-II CEW88_RS06100 PF01256 Carbohydrate kinase CEW88_RS06100 PF03853 YjeF-related protein N-terminus CEW88_RS06110 PF01757 Acyltransferase family CEW88_RS06115 PF11954 Domain of unknown function (DUF3471) CEW88_RS06115 PF00144 Beta-lactamase CEW88_RS06125 PF00550 Phosphopantetheine attachment site CEW88_RS06130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW88_RS06130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW88_RS06130 PF00205 Thiamine pyrophosphate enzyme, central domain CEW88_RS06135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS06145 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS06150 PF00171 Aldehyde dehydrogenase family CEW88_RS06165 PF00809 Pterin binding enzyme CEW88_RS06170 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS06175 PF02219 Methylenetetrahydrofolate reductase CEW88_RS06185 PF02541 Ppx/GppA phosphatase family CEW88_RS06190 PF01728 FtsJ-like methyltransferase CEW88_RS06205 PF13660 Domain of unknown function (DUF4147) CEW88_RS06205 PF05161 MOFRL family CEW88_RS06215 PF07690 Major Facilitator Superfamily CEW88_RS06230 PF13175 AAA ATPase domain CEW88_RS06260 PF00210 Ferritin-like domain CEW88_RS06280 PF08534 Redoxin CEW88_RS06285 PF04055 Radical SAM superfamily CEW88_RS06285 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CEW88_RS06310 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW88_RS06310 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW88_RS06315 PF02618 YceG-like family CEW88_RS06320 PF00398 Ribosomal RNA adenine dimethylase CEW88_RS06325 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEW88_RS06330 PF09312 SurA N-terminal domain CEW88_RS06330 PF00639 PPIC-type PPIASE domain CEW88_RS06335 PF04453 LPS transport system D CEW88_RS06335 PF03968 OstA-like protein CEW88_RS06350 PF00883 Cytosol aminopeptidase family, catalytic domain CEW88_RS06360 PF00027 Cyclic nucleotide-binding domain CEW88_RS06360 PF00325 Bacterial regulatory proteins, crp family CEW88_RS06370 PF01914 MarC family integral membrane protein CEW88_RS06375 PF12848 ABC transporter CEW88_RS06375 PF00005 ABC transporter CEW88_RS06380 PF00334 Nucleoside diphosphate kinase CEW88_RS06390 PF01679 Proteolipid membrane potential modulator CEW88_RS06400 PF00155 Aminotransferase class I and II CEW88_RS06415 PF04860 Phage portal protein CEW88_RS06490 PF06426 Serine acetyltransferase, N-terminal CEW88_RS06490 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS06495 PF00364 Biotin-requiring enzyme CEW88_RS06495 PF02817 e3 binding domain CEW88_RS06495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEW88_RS06500 PF02779 Transketolase, pyrimidine binding domain CEW88_RS06500 PF00364 Biotin-requiring enzyme CEW88_RS06500 PF02780 Transketolase, C-terminal domain CEW88_RS06505 PF00676 Dehydrogenase E1 component CEW88_RS06510 PF04977 Septum formation initiator CEW88_RS06515 PF00162 Phosphoglycerate kinase CEW88_RS06520 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEW88_RS06525 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CEW88_RS06535 PF00478 IMP dehydrogenase / GMP reductase domain CEW88_RS06535 PF00571 CBS domain CEW88_RS06540 PF01029 NusB family CEW88_RS06540 PF01189 16S rRNA methyltransferase RsmB/F CEW88_RS06555 PF00154 recA bacterial DNA recombination protein CEW88_RS06560 PF01521 Iron-sulphur cluster biosynthesis CEW88_RS06565 PF01966 HD domain CEW88_RS06565 PF13286 Phosphohydrolase-associated domain CEW88_RS06570 PF02080 TrkA-C domain CEW88_RS06570 PF03471 Transporter associated domain CEW88_RS06570 PF00999 Sodium/hydrogen exchanger family CEW88_RS06575 PF00750 tRNA synthetases class I (R) CEW88_RS06575 PF05746 DALR anticodon binding domain CEW88_RS06575 PF03485 Arginyl tRNA synthetase N terminal domain CEW88_RS06585 PF00933 Glycosyl hydrolase family 3 N terminal domain CEW88_RS06590 PF02616 Segregation and condensation protein ScpA CEW88_RS06595 PF04079 Segregation and condensation complex subunit ScpB CEW88_RS06610 PF00692 dUTPase CEW88_RS06620 PF13411 MerR HTH family regulatory protein CEW88_RS06625 PF00216 Bacterial DNA-binding protein CEW88_RS06630 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CEW88_RS06630 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CEW88_RS06635 PF02504 Fatty acid synthesis protein CEW88_RS06640 PF01783 Ribosomal L32p protein family CEW88_RS06660 PF00850 Histone deacetylase domain CEW88_RS06675 PF00579 tRNA synthetases class I (W and Y) CEW88_RS06680 PF03702 Anhydro-N-acetylmuramic acid kinase CEW88_RS06705 PF00691 OmpA family CEW88_RS06710 PF06463 Molybdenum Cofactor Synthesis C CEW88_RS06710 PF04055 Radical SAM superfamily CEW88_RS06720 PF00472 RF-1 domain CEW88_RS06720 PF03462 PCRF domain CEW88_RS06740 PF10369 Small subunit of acetolactate synthase CEW88_RS06740 PF01842 ACT domain CEW88_RS06745 PF00205 Thiamine pyrophosphate enzyme, central domain CEW88_RS06745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW88_RS06745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW88_RS06755 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS06755 PF00072 Response regulator receiver domain CEW88_RS06760 PF07730 Histidine kinase CEW88_RS06760 PF17200 Single Cache domain 2 CEW88_RS06765 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS06775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS06780 PF02574 Homocysteine S-methyltransferase CEW88_RS06780 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEW88_RS06780 PF02607 B12 binding domain CEW88_RS06780 PF02310 B12 binding domain CEW88_RS06780 PF00809 Pterin binding enzyme CEW88_RS06785 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS06785 PF00175 Oxidoreductase NAD-binding domain CEW88_RS06785 PF00970 Oxidoreductase FAD-binding domain CEW88_RS06790 PF00355 Rieske [2Fe-2S] domain CEW88_RS06790 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEW88_RS06795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW88_RS06795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW88_RS06800 PF01037 Lrp/AsnC ligand binding domain CEW88_RS06805 PF01207 Dihydrouridine synthase (Dus) CEW88_RS06815 PF03652 Holliday junction resolvase CEW88_RS06825 PF01266 FAD dependent oxidoreductase CEW88_RS06845 PF17806 Sarcosine oxidase A3 domain CEW88_RS06845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS06845 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW88_RS06845 PF01571 Aminomethyltransferase folate-binding domain CEW88_RS06860 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CEW88_RS06860 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CEW88_RS06865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS06870 PF00106 short chain dehydrogenase CEW88_RS06875 PF00296 Luciferase-like monooxygenase CEW88_RS06895 PF02028 BCCT, betaine/carnitine/choline family transporter CEW88_RS06905 PF03441 FAD binding domain of DNA photolyase CEW88_RS06905 PF00875 DNA photolyase CEW88_RS06915 PF00293 NUDIX domain CEW88_RS06920 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS06920 PF00571 CBS domain CEW88_RS06925 PF12795 Mechanosensitive ion channel porin domain CEW88_RS06925 PF12794 Mechanosensitive ion channel inner membrane domain 1 CEW88_RS06925 PF00924 Mechanosensitive ion channel CEW88_RS06930 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW88_RS06930 PF01411 tRNA synthetases class II (A) CEW88_RS06930 PF02272 DHHA1 domain CEW88_RS06945 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CEW88_RS06955 PF01156 Inosine-uridine preferring nucleoside hydrolase CEW88_RS06960 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CEW88_RS06960 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CEW88_RS06965 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEW88_RS06970 PF00342 Phosphoglucose isomerase CEW88_RS06995 PF05951 Bacterial protein of unknown function (DUF882) CEW88_RS07005 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CEW88_RS07005 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS07010 PF00550 Phosphopantetheine attachment site CEW88_RS07015 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW88_RS07015 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW88_RS07020 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW88_RS07020 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW88_RS07025 PF05661 Protein of unknown function (DUF808) CEW88_RS07030 PF00456 Transketolase, thiamine diphosphate binding domain CEW88_RS07030 PF02779 Transketolase, pyrimidine binding domain CEW88_RS07030 PF02780 Transketolase, C-terminal domain CEW88_RS07045 PF03952 Enolase, N-terminal domain CEW88_RS07045 PF00113 Enolase, C-terminal TIM barrel domain CEW88_RS07060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEW88_RS07060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEW88_RS07060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEW88_RS07060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEW88_RS07065 PF02446 4-alpha-glucanotransferase CEW88_RS07070 PF00128 Alpha amylase, catalytic domain CEW88_RS07070 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEW88_RS07075 PF08323 Starch synthase catalytic domain CEW88_RS07075 PF00534 Glycosyl transferases group 1 CEW88_RS07080 PF00483 Nucleotidyl transferase CEW88_RS07085 PF00128 Alpha amylase, catalytic domain CEW88_RS07085 PF02806 Alpha amylase, C-terminal all-beta domain CEW88_RS07085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEW88_RS07090 PF00343 Carbohydrate phosphorylase CEW88_RS07095 PF02685 Glucokinase CEW88_RS07100 PF00232 Glycosyl hydrolase family 1 CEW88_RS07105 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS07110 PF01547 Bacterial extracellular solute-binding protein CEW88_RS07115 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS07120 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS07125 PF00128 Alpha amylase, catalytic domain CEW88_RS07130 PF03459 TOBE domain CEW88_RS07130 PF00005 ABC transporter CEW88_RS07130 PF17912 MalK OB fold domain CEW88_RS07135 PF00005 ABC transporter CEW88_RS07135 PF17760 UvrA interaction domain CEW88_RS07135 PF17755 UvrA DNA-binding domain CEW88_RS07145 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS07155 PF02615 Malate/L-lactate dehydrogenase CEW88_RS07165 PF01799 [2Fe-2S] binding domain CEW88_RS07165 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS07170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS07170 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW88_RS07175 PF00941 FAD binding domain in molybdopterin dehydrogenase CEW88_RS07175 PF03450 CO dehydrogenase flavoprotein C-terminal domain CEW88_RS07180 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEW88_RS07180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW88_RS07190 PF00180 Isocitrate/isopropylmalate dehydrogenase CEW88_RS07195 PF07690 Major Facilitator Superfamily CEW88_RS07205 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW88_RS07205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW88_RS07210 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS07215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS07215 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS07215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS07220 PF00534 Glycosyl transferases group 1 CEW88_RS07220 PF13439 Glycosyltransferase Family 4 CEW88_RS07225 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS07235 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS07240 PF02769 AIR synthase related protein, C-terminal domain CEW88_RS07240 PF00586 AIR synthase related protein, N-terminal domain CEW88_RS07245 PF00551 Formyl transferase CEW88_RS07255 PF01612 3'-5' exonuclease CEW88_RS07255 PF00570 HRDC domain CEW88_RS07265 PF02657 Fe-S metabolism associated domain CEW88_RS07270 PF01765 Ribosome recycling factor CEW88_RS07275 PF01255 Putative undecaprenyl diphosphate synthase CEW88_RS07285 PF13288 DXP reductoisomerase C-terminal domain CEW88_RS07285 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CEW88_RS07285 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CEW88_RS07290 PF17820 PDZ domain CEW88_RS07290 PF02163 Peptidase family M50 CEW88_RS07295 PF07244 Surface antigen variable number repeat CEW88_RS07295 PF01103 Surface antigen CEW88_RS07305 PF07977 FabA-like domain CEW88_RS07310 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS07310 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CEW88_RS07320 PF02684 Lipid-A-disaccharide synthetase CEW88_RS07330 PF05872 Bacterial protein of unknown function (DUF853) CEW88_RS07345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS07370 PF04227 Indigoidine synthase A like protein CEW88_RS07385 PF09335 SNARE associated Golgi protein CEW88_RS07390 PF01220 Dehydroquinase class II CEW88_RS07395 PF00889 Elongation factor TS CEW88_RS07400 PF00318 Ribosomal protein S2 CEW88_RS07420 PF13533 Biotin-lipoyl like CEW88_RS07425 PF00072 Response regulator receiver domain CEW88_RS07425 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS07430 PF01895 PhoU domain CEW88_RS07435 PF00005 ABC transporter CEW88_RS07440 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS07455 PF00989 PAS fold CEW88_RS07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS07455 PF16736 Single Cache-like CEW88_RS07455 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS07460 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW88_RS07470 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS07475 PF00625 Guanylate kinase CEW88_RS07480 PF03755 YicC-like family, N-terminal region CEW88_RS07480 PF08340 Domain of unknown function (DUF1732) CEW88_RS07490 PF00483 Nucleotidyl transferase CEW88_RS07495 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CEW88_RS07495 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CEW88_RS07500 PF00982 Glycosyltransferase family 20 CEW88_RS07500 PF05116 Sucrose-6F-phosphate phosphohydrolase CEW88_RS07505 PF00982 Glycosyltransferase family 20 CEW88_RS07510 PF01474 Class-II DAHP synthetase family CEW88_RS07515 PF12833 Helix-turn-helix domain CEW88_RS07515 PF01965 DJ-1/PfpI family CEW88_RS07525 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS07525 PF00005 ABC transporter CEW88_RS07530 PF00005 ABC transporter CEW88_RS07540 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS07560 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS07560 PF00501 AMP-binding enzyme CEW88_RS07565 PF08471 Class II vitamin B12-dependent ribonucleotide reductase CEW88_RS07565 PF02867 Ribonucleotide reductase, barrel domain CEW88_RS07580 PF00313 'Cold-shock' DNA-binding domain CEW88_RS07585 PF01243 Pyridoxamine 5'-phosphate oxidase CEW88_RS07585 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CEW88_RS07595 PF00156 Phosphoribosyl transferase domain CEW88_RS07600 PF05368 NmrA-like family CEW88_RS07605 PF01638 HxlR-like helix-turn-helix CEW88_RS07610 PF00155 Aminotransferase class I and II CEW88_RS07620 PF00425 chorismate binding enzyme CEW88_RS07620 PF04715 Anthranilate synthase component I, N terminal region CEW88_RS07630 PF00080 Copper/zinc superoxide dismutase (SODC) CEW88_RS07635 PF00571 CBS domain CEW88_RS07635 PF02163 Peptidase family M50 CEW88_RS07640 PF00809 Pterin binding enzyme CEW88_RS07640 PF02310 B12 binding domain CEW88_RS07640 PF02574 Homocysteine S-methyltransferase CEW88_RS07640 PF02607 B12 binding domain CEW88_RS07640 PF02965 Vitamin B12 dependent methionine synthase, activation domain CEW88_RS07645 PF04055 Radical SAM superfamily CEW88_RS07650 PF02607 B12 binding domain CEW88_RS07650 PF02310 B12 binding domain CEW88_RS07665 PF00591 Glycosyl transferase family, a/b domain CEW88_RS07665 PF02885 Glycosyl transferase family, helical bundle domain CEW88_RS07670 PF03167 Uracil DNA glycosylase superfamily CEW88_RS07675 PF00218 Indole-3-glycerol phosphate synthase CEW88_RS07680 PF01967 MoaC family CEW88_RS07685 PF03453 MoeA N-terminal region (domain I and II) CEW88_RS07685 PF03454 MoeA C-terminal region (domain IV) CEW88_RS07685 PF00994 Probable molybdopterin binding domain CEW88_RS07690 PF01726 LexA DNA binding domain CEW88_RS07690 PF00717 Peptidase S24-like CEW88_RS07695 PF13567 Domain of unknown function (DUF4131) CEW88_RS07695 PF00753 Metallo-beta-lactamase superfamily CEW88_RS07695 PF03772 Competence protein CEW88_RS07700 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEW88_RS07705 PF00285 Citrate synthase, C-terminal domain CEW88_RS07710 PF00285 Citrate synthase, C-terminal domain CEW88_RS07715 PF02515 CoA-transferase family III CEW88_RS07720 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS07730 PF03918 Cytochrome C biogenesis protein CEW88_RS07735 PF01578 Cytochrome C assembly protein CEW88_RS07735 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CEW88_RS07745 PF01016 Ribosomal L27 protein CEW88_RS07750 PF00829 Ribosomal prokaryotic L21 protein CEW88_RS07775 PF09335 SNARE associated Golgi protein CEW88_RS07795 PF00072 Response regulator receiver domain CEW88_RS07795 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS07800 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW88_RS07800 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW88_RS07815 PF01467 Cytidylyltransferase-like CEW88_RS07820 PF00571 CBS domain CEW88_RS07825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS07825 PF03466 LysR substrate binding domain CEW88_RS07830 PF00171 Aldehyde dehydrogenase family CEW88_RS07855 PF02417 Chromate transporter CEW88_RS07865 PF10415 Fumarase C C-terminus CEW88_RS07865 PF00206 Lyase CEW88_RS07880 PF10397 Adenylosuccinate lyase C-terminus CEW88_RS07880 PF00206 Lyase CEW88_RS07910 PF00330 Aconitase family (aconitate hydratase) CEW88_RS07910 PF00694 Aconitase C-terminal domain CEW88_RS07920 PF00296 Luciferase-like monooxygenase CEW88_RS07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS07925 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS07930 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS07930 PF00072 Response regulator receiver domain CEW88_RS07935 PF03734 L,D-transpeptidase catalytic domain CEW88_RS07940 PF03734 L,D-transpeptidase catalytic domain CEW88_RS07945 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW88_RS07945 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW88_RS07950 PF08125 Mannitol dehydrogenase C-terminal domain CEW88_RS07950 PF01232 Mannitol dehydrogenase Rossmann domain CEW88_RS07960 PF08402 TOBE domain CEW88_RS07960 PF00005 ABC transporter CEW88_RS07965 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS07970 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS07980 PF04198 Putative sugar-binding domain CEW88_RS07995 PF00902 Sec-independent protein translocase protein (TatC) CEW88_RS08005 PF02416 mttA/Hcf106 family CEW88_RS08010 PF08279 HTH domain CEW88_RS08010 PF13280 WYL domain CEW88_RS08020 PF04264 YceI-like domain CEW88_RS08030 PF01250 Ribosomal protein S6 CEW88_RS08035 PF01084 Ribosomal protein S18 CEW88_RS08040 PF01281 Ribosomal protein L9, N-terminal domain CEW88_RS08040 PF03948 Ribosomal protein L9, C-terminal domain CEW88_RS08050 PF05698 Bacterial trigger factor protein (TF) C-terminus CEW88_RS08050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEW88_RS08050 PF05697 Bacterial trigger factor protein (TF) CEW88_RS08055 PF02233 NAD(P) transhydrogenase beta subunit CEW88_RS08060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEW88_RS08060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEW88_RS08060 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CEW88_RS08070 PF00266 Aminotransferase class-V CEW88_RS08075 PF07722 Peptidase C26 CEW88_RS08085 PF01274 Malate synthase CEW88_RS08090 PF00005 ABC transporter CEW88_RS08090 PF00664 ABC transporter transmembrane region CEW88_RS08115 PF00274 Fructose-bisphosphate aldolase class-I CEW88_RS08120 PF00067 Cytochrome P450 CEW88_RS08130 PF02683 Cytochrome C biogenesis protein transmembrane region CEW88_RS08135 PF12111 Polyribonucleotide phosphorylase C terminal CEW88_RS08135 PF00575 S1 RNA binding domain CEW88_RS08135 PF10150 Ribonuclease E/G family CEW88_RS08140 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW88_RS08145 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW88_RS08145 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW88_RS08150 PF01804 Penicillin amidase CEW88_RS08160 PF16360 GTP-binding GTPase Middle Region CEW88_RS08160 PF13167 GTP-binding GTPase N-terminal CEW88_RS08160 PF01926 50S ribosome-binding GTPase CEW88_RS08165 PF17209 Hfq protein CEW88_RS08170 PF02386 Cation transport protein CEW88_RS08175 PF02080 TrkA-C domain CEW88_RS08175 PF02254 TrkA-N domain CEW88_RS08180 PF02954 Bacterial regulatory protein, Fis family CEW88_RS08180 PF00072 Response regulator receiver domain CEW88_RS08180 PF00158 Sigma-54 interaction domain CEW88_RS08185 PF00672 HAMP domain CEW88_RS08185 PF00989 PAS fold CEW88_RS08185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS08185 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS08190 PF14532 Sigma-54 interaction domain CEW88_RS08190 PF00072 Response regulator receiver domain CEW88_RS08190 PF02954 Bacterial regulatory protein, Fis family CEW88_RS08195 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS08195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS08200 PF01207 Dihydrouridine synthase (Dus) CEW88_RS08205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CEW88_RS08205 PF02542 YgbB family CEW88_RS08215 PF02464 Competence-damaged protein CEW88_RS08220 PF03364 Polyketide cyclase / dehydrase and lipid transport CEW88_RS08225 PF00156 Phosphoribosyl transferase domain CEW88_RS08235 PF00034 Cytochrome c CEW88_RS08240 PF01134 Glucose inhibited division protein A CEW88_RS08250 PF00749 tRNA synthetases class I (E and Q), catalytic domain CEW88_RS08255 PF01502 Phosphoribosyl-AMP cyclohydrolase CEW88_RS08265 PF00271 Helicase conserved C-terminal domain CEW88_RS08265 PF17191 RecG wedge domain CEW88_RS08265 PF00270 DEAD/DEAH box helicase CEW88_RS08270 PF12826 Helix-hairpin-helix motif CEW88_RS08270 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CEW88_RS08270 PF03120 NAD-dependent DNA ligase OB-fold domain CEW88_RS08270 PF01653 NAD-dependent DNA ligase adenylation domain CEW88_RS08270 PF00533 BRCA1 C Terminus (BRCT) domain CEW88_RS08275 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS08275 PF00072 Response regulator receiver domain CEW88_RS08300 PF00990 Diguanylate cyclase, GGDEF domain CEW88_RS08300 PF00563 EAL domain CEW88_RS08300 PF03707 Bacterial signalling protein N terminal repeat CEW88_RS08305 PF00158 Sigma-54 interaction domain CEW88_RS08305 PF00072 Response regulator receiver domain CEW88_RS08305 PF02954 Bacterial regulatory protein, Fis family CEW88_RS08310 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS08310 PF02743 Cache domain CEW88_RS08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS08320 PF13823 Alcohol dehydrogenase GroES-associated CEW88_RS08320 PF00107 Zinc-binding dehydrogenase CEW88_RS08320 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS08325 PF04204 Homoserine O-succinyltransferase CEW88_RS08330 PF00561 alpha/beta hydrolase fold CEW88_RS08335 PF03976 Polyphosphate kinase 2 (PPK2) CEW88_RS08355 PF00380 Ribosomal protein S9/S16 CEW88_RS08360 PF00572 Ribosomal protein L13 CEW88_RS08365 PF00155 Aminotransferase class I and II CEW88_RS08365 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS08375 PF01761 3-dehydroquinate synthase CEW88_RS08380 PF01202 Shikimate kinase CEW88_RS08390 PF02899 Phage integrase, N-terminal SAM-like domain CEW88_RS08390 PF00589 Phage integrase family CEW88_RS08395 PF00696 Amino acid kinase family CEW88_RS08415 PF03150 Di-haem cytochrome c peroxidase CEW88_RS08420 PF01464 Transglycosylase SLT domain CEW88_RS08425 PF00436 Single-strand binding protein family CEW88_RS08430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS08430 PF08448 PAS fold CEW88_RS08430 PF13188 PAS domain CEW88_RS08430 PF00072 Response regulator receiver domain CEW88_RS08430 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS08440 PF01595 Cyclin M transmembrane N-terminal domain CEW88_RS08440 PF00571 CBS domain CEW88_RS08440 PF03471 Transporter associated domain CEW88_RS08460 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CEW88_RS08465 PF01259 SAICAR synthetase CEW88_RS08475 PF00672 HAMP domain CEW88_RS08475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS08475 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS08560 PF01695 IstB-like ATP binding protein CEW88_RS08565 PF12833 Helix-turn-helix domain CEW88_RS08570 PF00795 Carbon-nitrogen hydrolase CEW88_RS08600 PF00989 PAS fold CEW88_RS08615 PF00501 AMP-binding enzyme CEW88_RS08615 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS08620 PF07728 AAA domain (dynein-related subfamily) CEW88_RS08630 PF00741 Gas vesicle protein CEW88_RS08660 PF00741 Gas vesicle protein CEW88_RS08685 PF00741 Gas vesicle protein CEW88_RS08690 PF13426 PAS domain CEW88_RS08690 PF08447 PAS fold CEW88_RS08690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW88_RS08705 PF13519 von Willebrand factor type A domain CEW88_RS08705 PF07584 Aerotolerance regulator N-terminal CEW88_RS08720 PF01882 Protein of unknown function DUF58 CEW88_RS08725 PF17863 AAA lid domain CEW88_RS08725 PF07726 ATPase family associated with various cellular activities (AAA) CEW88_RS08735 PF00884 Sulfatase CEW88_RS08740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS08740 PF03466 LysR substrate binding domain CEW88_RS08745 PF00199 Catalase CEW88_RS08745 PF06628 Catalase-related immune-responsive CEW88_RS08775 PF00958 GMP synthase C terminal domain CEW88_RS08775 PF02540 NAD synthase CEW88_RS08775 PF00117 Glutamine amidotransferase class-I CEW88_RS08795 PF00672 HAMP domain CEW88_RS08795 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW88_RS08795 PF02203 Tar ligand binding domain homologue CEW88_RS08805 PF00893 Small Multidrug Resistance protein CEW88_RS08810 PF00679 Elongation factor G C-terminus CEW88_RS08810 PF00009 Elongation factor Tu GTP binding domain CEW88_RS08810 PF03144 Elongation factor Tu domain 2 CEW88_RS08830 PF02272 DHHA1 domain CEW88_RS08830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CEW88_RS08830 PF01411 tRNA synthetases class II (A) CEW88_RS08860 PF00462 Glutaredoxin CEW88_RS08870 PF00557 Metallopeptidase family M24 CEW88_RS08875 PF03100 CcmE CEW88_RS08880 PF01177 Asp/Glu/Hydantoin racemase CEW88_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS08890 PF03466 LysR substrate binding domain CEW88_RS08895 PF00586 AIR synthase related protein, N-terminal domain CEW88_RS08895 PF02769 AIR synthase related protein, C-terminal domain CEW88_RS08895 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CEW88_RS08910 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEW88_RS08915 PF02628 Cytochrome oxidase assembly protein CEW88_RS08920 PF00588 SpoU rRNA Methylase family CEW88_RS08935 PF02581 Thiamine monophosphate synthase CEW88_RS08935 PF02110 Hydroxyethylthiazole kinase family CEW88_RS08955 PF10090 Histidine phosphotransferase C-terminal domain CEW88_RS08960 PF00171 Aldehyde dehydrogenase family CEW88_RS08965 PF00696 Amino acid kinase family CEW88_RS08965 PF01472 PUA domain CEW88_RS08970 PF01018 GTP1/OBG CEW88_RS08970 PF01926 50S ribosome-binding GTPase CEW88_RS08990 PF01883 Iron-sulfur cluster assembly protein CEW88_RS09000 PF01521 Iron-sulphur cluster biosynthesis CEW88_RS09005 PF00121 Triosephosphate isomerase CEW88_RS09010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS09015 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS09020 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS09025 PF00072 Response regulator receiver domain CEW88_RS09025 PF00158 Sigma-54 interaction domain CEW88_RS09025 PF02954 Bacterial regulatory protein, Fis family CEW88_RS09030 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS09030 PF02743 Cache domain CEW88_RS09035 PF00067 Cytochrome P450 CEW88_RS09040 PF12706 Beta-lactamase superfamily domain CEW88_RS09040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEW88_RS09040 PF17770 Ribonuclease J C-terminal domain CEW88_RS09045 PF03309 Type III pantothenate kinase CEW88_RS09050 PF03099 Biotin/lipoate A/B protein ligase family CEW88_RS09050 PF02237 Biotin protein ligase C terminal domain CEW88_RS09055 PF00361 Proton-conducting membrane transporter CEW88_RS09060 PF00361 Proton-conducting membrane transporter CEW88_RS09065 PF00361 Proton-conducting membrane transporter CEW88_RS09065 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEW88_RS09070 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEW88_RS09075 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CEW88_RS09080 PF02627 Carboxymuconolactone decarboxylase family CEW88_RS09085 PF12838 4Fe-4S dicluster domain CEW88_RS09090 PF00146 NADH dehydrogenase CEW88_RS09100 PF00384 Molybdopterin oxidoreductase CEW88_RS09100 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW88_RS09100 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CEW88_RS09120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW88_RS09120 PF10531 SLBB domain CEW88_RS09120 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEW88_RS09145 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CEW88_RS09150 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CEW88_RS09155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CEW88_RS09160 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CEW88_RS09165 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS09170 PF00682 HMGL-like CEW88_RS09175 PF14497 Glutathione S-transferase, C-terminal domain CEW88_RS09175 PF02798 Glutathione S-transferase, N-terminal domain CEW88_RS09180 PF02785 Biotin carboxylase C-terminal domain CEW88_RS09180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW88_RS09180 PF00364 Biotin-requiring enzyme CEW88_RS09180 PF00289 Biotin carboxylase, N-terminal domain CEW88_RS09185 PF01039 Carboxyl transferase domain CEW88_RS09190 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS09190 PF00501 AMP-binding enzyme CEW88_RS09200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS09200 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS09200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS09215 PF01494 FAD binding domain CEW88_RS09220 PF01258 Prokaryotic dksA/traR C4-type zinc finger CEW88_RS09225 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS09225 PF01434 Peptidase family M41 CEW88_RS09225 PF17862 AAA+ lid domain CEW88_RS09230 PF00271 Helicase conserved C-terminal domain CEW88_RS09230 PF00270 DEAD/DEAH box helicase CEW88_RS09235 PF02566 OsmC-like protein CEW88_RS09245 PF01037 Lrp/AsnC ligand binding domain CEW88_RS09255 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEW88_RS09255 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CEW88_RS09260 PF01507 Phosphoadenosine phosphosulfate reductase family CEW88_RS09270 PF00175 Oxidoreductase NAD-binding domain CEW88_RS09270 PF00970 Oxidoreductase FAD-binding domain CEW88_RS09285 PF00707 Translation initiation factor IF-3, C-terminal domain CEW88_RS09285 PF05198 Translation initiation factor IF-3, N-terminal domain CEW88_RS09295 PF02625 XdhC and CoxI family CEW88_RS09295 PF13478 XdhC Rossmann domain CEW88_RS09300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CEW88_RS09305 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS09310 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS09310 PF12804 MobA-like NTP transferase domain CEW88_RS09315 PF01380 SIS domain CEW88_RS09320 PF00266 Aminotransferase class-V CEW88_RS09335 PF01458 Uncharacterized protein family (UPF0051) CEW88_RS09340 PF00005 ABC transporter CEW88_RS09350 PF01906 Putative heavy-metal-binding CEW88_RS09360 PF01458 Uncharacterized protein family (UPF0051) CEW88_RS09365 PF00266 Aminotransferase class-V CEW88_RS09370 PF02082 Transcriptional regulator CEW88_RS09375 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CEW88_RS09390 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS09390 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW88_RS09415 PF02547 Queuosine biosynthesis protein CEW88_RS09425 PF00578 AhpC/TSA family CEW88_RS09430 PF08525 Opacity-associated protein A N-terminal motif CEW88_RS09430 PF01476 LysM domain CEW88_RS09430 PF01551 Peptidase family M23 CEW88_RS09465 PF07690 Major Facilitator Superfamily CEW88_RS09475 PF08502 LeuA allosteric (dimerisation) domain CEW88_RS09475 PF00682 HMGL-like CEW88_RS09480 PF01406 tRNA synthetases class I (C) catalytic domain CEW88_RS09480 PF09190 DALR domain CEW88_RS09490 PF17827 PrmC N-terminal domain CEW88_RS09490 PF05175 Methyltransferase small domain CEW88_RS09495 PF00472 RF-1 domain CEW88_RS09495 PF03462 PCRF domain CEW88_RS09510 PF00491 Arginase family CEW88_RS09515 PF01546 Peptidase family M20/M25/M40 CEW88_RS09515 PF07687 Peptidase dimerisation domain CEW88_RS09520 PF01546 Peptidase family M20/M25/M40 CEW88_RS09520 PF07687 Peptidase dimerisation domain CEW88_RS09525 PF03819 MazG nucleotide pyrophosphohydrolase domain CEW88_RS09530 PF13416 Bacterial extracellular solute-binding protein CEW88_RS09535 PF07969 Amidohydrolase family CEW88_RS09550 PF00005 ABC transporter CEW88_RS09555 PF00005 ABC transporter CEW88_RS09560 PF06007 Phosphonate metabolism protein PhnJ CEW88_RS09570 PF05861 Bacterial phosphonate metabolism protein (PhnI) CEW88_RS09575 PF05845 Bacterial phosphonate metabolism protein (PhnH) CEW88_RS09580 PF06754 Phosphonate metabolism protein PhnG CEW88_RS09585 PF07702 UTRA domain CEW88_RS09585 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS09600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW88_RS09600 PF00672 HAMP domain CEW88_RS09605 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS09610 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS09625 PF00005 ABC transporter CEW88_RS09635 PF01244 Membrane dipeptidase (Peptidase family M19) CEW88_RS09640 PF00698 Acyl transferase domain CEW88_RS09645 PF13458 Periplasmic binding protein CEW88_RS09655 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS09655 PF00005 ABC transporter CEW88_RS09660 PF00005 ABC transporter CEW88_RS09665 PF12802 MarR family CEW88_RS09670 PF00873 AcrB/AcrD/AcrF family CEW88_RS09675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS09675 PF00529 HlyD membrane-fusion protein of T1SS CEW88_RS09685 PF13632 Glycosyl transferase family group 2 CEW88_RS09690 PF04349 Periplasmic glucan biosynthesis protein, MdoG CEW88_RS09705 PF01425 Amidase CEW88_RS09710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS09710 PF00005 ABC transporter CEW88_RS09715 PF00005 ABC transporter CEW88_RS09715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS09720 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS09720 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS09725 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS09730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS09735 PF01270 Glycosyl hydrolases family 8 CEW88_RS09745 PF03170 Bacterial cellulose synthase subunit CEW88_RS09745 PF00535 Glycosyl transferase family 2 CEW88_RS09745 PF07238 PilZ domain CEW88_RS09745 PF03552 Cellulose synthase CEW88_RS09755 PF00108 Thiolase, N-terminal domain CEW88_RS09755 PF02803 Thiolase, C-terminal domain CEW88_RS09760 PF01144 Coenzyme A transferase CEW88_RS09765 PF01144 Coenzyme A transferase CEW88_RS09770 PF09339 IclR helix-turn-helix domain CEW88_RS09770 PF01614 Bacterial transcriptional regulator CEW88_RS09775 PF13180 PDZ domain CEW88_RS09785 PF01145 SPFH domain / Band 7 family CEW88_RS09790 PF01145 SPFH domain / Band 7 family CEW88_RS09790 PF12221 Bacterial membrane protein N terminal CEW88_RS09795 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS09795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW88_RS09800 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CEW88_RS09805 PF03315 Serine dehydratase beta chain CEW88_RS09805 PF03313 Serine dehydratase alpha chain CEW88_RS09830 PF00005 ABC transporter CEW88_RS09835 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS09840 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS09845 PF07969 Amidohydrolase family CEW88_RS09860 PF02272 DHHA1 domain CEW88_RS09860 PF17768 RecJ OB domain CEW88_RS09860 PF01368 DHH family CEW88_RS09865 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CEW88_RS09870 PF03447 Homoserine dehydrogenase, NAD binding domain CEW88_RS09870 PF00742 Homoserine dehydrogenase CEW88_RS09870 PF01842 ACT domain CEW88_RS09900 PF00005 ABC transporter CEW88_RS09905 PF12704 MacB-like periplasmic core domain CEW88_RS09905 PF02687 FtsX-like permease family CEW88_RS09910 PF00155 Aminotransferase class I and II CEW88_RS09920 PF00266 Aminotransferase class-V CEW88_RS09930 PF00005 ABC transporter CEW88_RS09930 PF00664 ABC transporter transmembrane region CEW88_RS09935 PF01571 Aminomethyltransferase folate-binding domain CEW88_RS09945 PF09285 Elongation factor P, C-terminal CEW88_RS09945 PF08207 Elongation factor P (EF-P) KOW-like domain CEW88_RS09945 PF01132 Elongation factor P (EF-P) OB domain CEW88_RS09960 PF02321 Outer membrane efflux protein CEW88_RS09985 PF00384 Molybdopterin oxidoreductase CEW88_RS09985 PF01568 Molydopterin dinucleotide binding domain CEW88_RS09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS09995 PF00672 HAMP domain CEW88_RS09995 PF13426 PAS domain CEW88_RS09995 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS10005 PF00072 Response regulator receiver domain CEW88_RS10005 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS10010 PF01381 Helix-turn-helix CEW88_RS10010 PF06114 IrrE N-terminal-like domain CEW88_RS10010 PF09856 Predicted transcriptional regulator (DUF2083) CEW88_RS10020 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS10030 PF00005 ABC transporter CEW88_RS10030 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS10035 PF00005 ABC transporter CEW88_RS10040 PF00501 AMP-binding enzyme CEW88_RS10040 PF16177 Acetyl-coenzyme A synthetase N-terminus CEW88_RS10040 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS10050 PF00364 Biotin-requiring enzyme CEW88_RS10055 PF02785 Biotin carboxylase C-terminal domain CEW88_RS10055 PF00289 Biotin carboxylase, N-terminal domain CEW88_RS10055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW88_RS10060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CEW88_RS10090 PF06689 ClpX C4-type zinc finger CEW88_RS10090 PF10431 C-terminal, D2-small domain, of ClpB protein CEW88_RS10090 PF07724 AAA domain (Cdc48 subfamily) CEW88_RS10095 PF00574 Clp protease CEW88_RS10100 PF01545 Cation efflux family CEW88_RS10105 PF00677 Lumazine binding domain CEW88_RS10110 PF05159 Capsule polysaccharide biosynthesis protein CEW88_RS10120 PF05159 Capsule polysaccharide biosynthesis protein CEW88_RS10125 PF00950 ABC 3 transport family CEW88_RS10130 PF00005 ABC transporter CEW88_RS10135 PF01475 Ferric uptake regulator family CEW88_RS10140 PF01297 Zinc-uptake complex component A periplasmic CEW88_RS10150 PF01032 FecCD transport family CEW88_RS10155 PF01032 FecCD transport family CEW88_RS10160 PF00005 ABC transporter CEW88_RS10165 PF08021 Siderophore-interacting FAD-binding domain CEW88_RS10165 PF04954 Siderophore-interacting protein CEW88_RS10170 PF03746 LamB/YcsF family CEW88_RS10175 PF02626 Carboxyltransferase domain, subdomain A and B CEW88_RS10180 PF02682 Carboxyltransferase domain, subdomain C and D CEW88_RS10185 PF03884 DNA gyrase inhibitor YacG CEW88_RS10190 PF10150 Ribonuclease E/G family CEW88_RS10195 PF02545 Maf-like protein CEW88_RS10200 PF01176 Translation initiation factor 1A / IF-1 CEW88_RS10205 PF00795 Carbon-nitrogen hydrolase CEW88_RS10225 PF06793 Uncharacterised protein family (UPF0262) CEW88_RS10230 PF00815 Histidinol dehydrogenase CEW88_RS10245 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEW88_RS10255 PF01928 CYTH domain CEW88_RS10260 PF13614 AAA domain CEW88_RS10280 PF08278 DNA primase DnaG DnaB-binding CEW88_RS10280 PF10410 DnaB-helicase binding domain of primase CEW88_RS10280 PF01807 CHC2 zinc finger CEW88_RS10280 PF08275 DNA primase catalytic core, N-terminal domain CEW88_RS10285 PF04546 Sigma-70, non-essential region CEW88_RS10285 PF03979 Sigma-70 factor, region 1.1 CEW88_RS10285 PF04545 Sigma-70, region 4 CEW88_RS10285 PF00140 Sigma-70 factor, region 1.2 CEW88_RS10285 PF04542 Sigma-70 region 2 CEW88_RS10285 PF04539 Sigma-70 region 3 CEW88_RS10295 PF09335 SNARE associated Golgi protein CEW88_RS10300 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS10305 PF01103 Surface antigen CEW88_RS10305 PF17243 POTRA domain TamA domain 1 CEW88_RS10320 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEW88_RS10325 PF01730 UreF CEW88_RS10330 PF05194 UreE urease accessory protein, C-terminal domain CEW88_RS10330 PF02814 UreE urease accessory protein, N-terminal domain CEW88_RS10340 PF00449 Urease alpha-subunit, N-terminal domain CEW88_RS10340 PF01979 Amidohydrolase family CEW88_RS10365 PF00699 Urease beta subunit CEW88_RS10370 PF00547 Urease, gamma subunit CEW88_RS10375 PF01774 UreD urease accessory protein CEW88_RS10380 PF01980 tRNA-methyltransferase O CEW88_RS10385 PF01081 KDPG and KHG aldolase CEW88_RS10390 PF05035 2-keto-3-deoxy-galactonokinase CEW88_RS10400 PF01791 DeoC/LacD family aldolase CEW88_RS10410 PF04168 A predicted alpha-helical domain with a conserved ER motif. CEW88_RS10410 PF14403 Circularly permuted ATP-grasp type 2 CEW88_RS10420 PF00106 short chain dehydrogenase CEW88_RS10430 PF01894 Uncharacterised protein family UPF0047 CEW88_RS10435 PF03477 ATP cone domain CEW88_RS10440 PF01872 RibD C-terminal domain CEW88_RS10440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEW88_RS10445 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEW88_RS10445 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEW88_RS10470 PF01817 Chorismate mutase type II CEW88_RS10470 PF01842 ACT domain CEW88_RS10470 PF00800 Prephenate dehydratase CEW88_RS10475 PF00034 Cytochrome c CEW88_RS10480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS10485 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS10490 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS10490 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS10495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS10495 PF00005 ABC transporter CEW88_RS10500 PF04055 Radical SAM superfamily CEW88_RS10505 PF00027 Cyclic nucleotide-binding domain CEW88_RS10505 PF13545 Crp-like helix-turn-helix domain CEW88_RS10510 PF07237 Protein of unknown function (DUF1428) CEW88_RS10530 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW88_RS10545 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CEW88_RS10545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW88_RS10550 PF03466 LysR substrate binding domain CEW88_RS10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS10555 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase CEW88_RS10555 PF12801 4Fe-4S binding domain CEW88_RS10555 PF13746 4Fe-4S dicluster domain CEW88_RS10565 PF00403 Heavy-metal-associated domain CEW88_RS10585 PF01037 Lrp/AsnC ligand binding domain CEW88_RS10590 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEW88_RS10590 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEW88_RS10595 PF16916 Dimerisation domain of Zinc Transporter CEW88_RS10595 PF01545 Cation efflux family CEW88_RS10600 PF01741 Large-conductance mechanosensitive channel, MscL CEW88_RS10620 PF04085 rod shape-determining protein MreC CEW88_RS10630 PF03717 Penicillin-binding Protein dimerisation domain CEW88_RS10630 PF00905 Penicillin binding protein transpeptidase domain CEW88_RS10635 PF01098 Cell cycle protein CEW88_RS10640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS10645 PF00834 Ribulose-phosphate 3 epimerase family CEW88_RS10650 PF00916 Sulfate permease family CEW88_RS10650 PF01740 STAS domain CEW88_RS10655 PF01048 Phosphorylase superfamily CEW88_RS10660 PF01810 LysE type translocator CEW88_RS10665 PF00156 Phosphoribosyl transferase domain CEW88_RS10675 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CEW88_RS10675 PF00561 alpha/beta hydrolase fold CEW88_RS10685 PF01144 Coenzyme A transferase CEW88_RS10690 PF01144 Coenzyme A transferase CEW88_RS10695 PF01131 DNA topoisomerase CEW88_RS10695 PF01396 Topoisomerase DNA binding C4 zinc finger CEW88_RS10695 PF13368 Topoisomerase C-terminal repeat CEW88_RS10695 PF01751 Toprim domain CEW88_RS10700 PF02481 DNA recombination-mediator protein A CEW88_RS10700 PF17782 DprA winged helix domain CEW88_RS10705 PF01523 Putative modulator of DNA gyrase CEW88_RS10710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CEW88_RS10710 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CEW88_RS10715 PF01040 UbiA prenyltransferase family CEW88_RS10725 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CEW88_RS10730 PF00510 Cytochrome c oxidase subunit III CEW88_RS10735 PF02104 SURF1 family CEW88_RS10740 PF14821 Threonine synthase N terminus CEW88_RS10740 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS10745 PF00675 Insulinase (Peptidase family M16) CEW88_RS10745 PF05193 Peptidase M16 inactive domain CEW88_RS10760 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS10765 PF13649 Methyltransferase domain CEW88_RS10770 PF13416 Bacterial extracellular solute-binding protein CEW88_RS10775 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS10780 PF00005 ABC transporter CEW88_RS10785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW88_RS10785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW88_RS10795 PF00293 NUDIX domain CEW88_RS10795 PF09297 NADH pyrophosphatase zinc ribbon domain CEW88_RS10795 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CEW88_RS10800 PF02872 5'-nucleotidase, C-terminal domain CEW88_RS10800 PF00149 Calcineurin-like phosphoesterase CEW88_RS10805 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS10810 PF09084 NMT1/THI5 like CEW88_RS10815 PF00005 ABC transporter CEW88_RS10820 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS10840 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS10840 PF00072 Response regulator receiver domain CEW88_RS10855 PF01627 Hpt domain CEW88_RS10855 PF00072 Response regulator receiver domain CEW88_RS10855 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS10855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS10855 PF00672 HAMP domain CEW88_RS10855 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CEW88_RS10860 PF00535 Glycosyl transferase family 2 CEW88_RS10865 PF00535 Glycosyl transferase family 2 CEW88_RS10875 PF03466 LysR substrate binding domain CEW88_RS10875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS10890 PF00691 OmpA family CEW88_RS10890 PF05736 OprF membrane domain CEW88_RS10895 PF01040 UbiA prenyltransferase family CEW88_RS10900 PF04452 RNA methyltransferase CEW88_RS10915 PF04107 Glutamate-cysteine ligase family 2(GCS2) CEW88_RS10925 PF01740 STAS domain CEW88_RS10930 PF00108 Thiolase, N-terminal domain CEW88_RS10930 PF02803 Thiolase, C-terminal domain CEW88_RS10935 PF00849 RNA pseudouridylate synthase CEW88_RS10950 PF00444 Ribosomal protein L36 CEW88_RS10955 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CEW88_RS10965 PF00216 Bacterial DNA-binding protein CEW88_RS10975 PF00575 S1 RNA binding domain CEW88_RS10980 PF02954 Bacterial regulatory protein, Fis family CEW88_RS10985 PF00171 Aldehyde dehydrogenase family CEW88_RS11005 PF04402 Protein of unknown function (DUF541) CEW88_RS11015 PF05746 DALR anticodon binding domain CEW88_RS11015 PF02092 Glycyl-tRNA synthetase beta subunit CEW88_RS11020 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEW88_RS11020 PF00391 PEP-utilising enzyme, mobile domain CEW88_RS11020 PF02896 PEP-utilising enzyme, TIM barrel domain CEW88_RS11025 PF07486 Cell Wall Hydrolase CEW88_RS11025 PF01471 Putative peptidoglycan binding domain CEW88_RS11030 PF02152 Dihydroneopterin aldolase CEW88_RS11035 PF00809 Pterin binding enzyme CEW88_RS11040 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEW88_RS11040 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEW88_RS11040 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEW88_RS11040 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEW88_RS11045 PF01554 MatE CEW88_RS11060 PF00376 MerR family regulatory protein CEW88_RS11060 PF09278 MerR, DNA binding CEW88_RS11065 PF09278 MerR, DNA binding CEW88_RS11065 PF00376 MerR family regulatory protein CEW88_RS11075 PF02798 Glutathione S-transferase, N-terminal domain CEW88_RS11075 PF00043 Glutathione S-transferase, C-terminal domain CEW88_RS11080 PF02803 Thiolase, C-terminal domain CEW88_RS11080 PF00108 Thiolase, N-terminal domain CEW88_RS11090 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS11090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS11090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS11105 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS11105 PF00107 Zinc-binding dehydrogenase CEW88_RS11110 PF02310 B12 binding domain CEW88_RS11110 PF01642 Methylmalonyl-CoA mutase CEW88_RS11115 PF00816 H-NS histone family CEW88_RS11120 PF01048 Phosphorylase superfamily CEW88_RS11135 PF13237 4Fe-4S dicluster domain CEW88_RS11135 PF13085 2Fe-2S iron-sulfur cluster binding domain CEW88_RS11145 PF00890 FAD binding domain CEW88_RS11145 PF02910 Fumarate reductase flavoprotein C-term CEW88_RS11150 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEW88_RS11155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CEW88_RS11160 PF01575 MaoC like domain CEW88_RS11175 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW88_RS11185 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEW88_RS11190 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11195 PF00005 ABC transporter CEW88_RS11200 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEW88_RS11205 PF00056 lactate/malate dehydrogenase, NAD binding domain CEW88_RS11210 PF08442 ATP-grasp domain CEW88_RS11210 PF00549 CoA-ligase CEW88_RS11215 PF00549 CoA-ligase CEW88_RS11215 PF02629 CoA binding domain CEW88_RS11220 PF16870 2-oxoglutarate dehydrogenase C-terminal CEW88_RS11220 PF00676 Dehydrogenase E1 component CEW88_RS11220 PF16078 2-oxoglutarate dehydrogenase N-terminus CEW88_RS11220 PF02779 Transketolase, pyrimidine binding domain CEW88_RS11225 PF00364 Biotin-requiring enzyme CEW88_RS11225 PF02817 e3 binding domain CEW88_RS11225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CEW88_RS11240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW88_RS11240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS11265 PF00005 ABC transporter CEW88_RS11275 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11280 PF00005 ABC transporter CEW88_RS11295 PF00202 Aminotransferase class-III CEW88_RS11310 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CEW88_RS11310 PF01048 Phosphorylase superfamily CEW88_RS11330 PF14489 QueF-like protein CEW88_RS11335 PF04055 Radical SAM superfamily CEW88_RS11340 PF01242 6-pyruvoyl tetrahydropterin synthase CEW88_RS11345 PF06508 Queuosine biosynthesis protein QueC CEW88_RS11355 PF02779 Transketolase, pyrimidine binding domain CEW88_RS11355 PF02780 Transketolase, C-terminal domain CEW88_RS11355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CEW88_RS11360 PF00348 Polyprenyl synthetase CEW88_RS11365 PF02609 Exonuclease VII small subunit CEW88_RS11370 PF00850 Histone deacetylase domain CEW88_RS11375 PF00072 Response regulator receiver domain CEW88_RS11375 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS11380 PF12802 MarR family CEW88_RS11385 PF01063 Amino-transferase class IV CEW88_RS11395 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11400 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11410 PF00005 ABC transporter CEW88_RS11410 PF08402 TOBE domain CEW88_RS11415 PF01546 Peptidase family M20/M25/M40 CEW88_RS11415 PF07687 Peptidase dimerisation domain CEW88_RS11425 PF00925 GTP cyclohydrolase II CEW88_RS11430 PF00072 Response regulator receiver domain CEW88_RS11430 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS11440 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CEW88_RS11440 PF00013 KH domain CEW88_RS11440 PF03725 3' exoribonuclease family, domain 2 CEW88_RS11440 PF00575 S1 RNA binding domain CEW88_RS11440 PF01138 3' exoribonuclease family, domain 1 CEW88_RS11445 PF00312 Ribosomal protein S15 CEW88_RS11455 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS11460 PF03966 Trm112p-like protein CEW88_RS11470 PF00085 Thioredoxin CEW88_RS11480 PF13091 PLD-like domain CEW88_RS11480 PF13396 Phospholipase_D-nuclease N-terminal CEW88_RS11495 PF02772 S-adenosylmethionine synthetase, central domain CEW88_RS11495 PF02773 S-adenosylmethionine synthetase, C-terminal domain CEW88_RS11495 PF00438 S-adenosylmethionine synthetase, N-terminal domain CEW88_RS11500 PF00795 Carbon-nitrogen hydrolase CEW88_RS11510 PF02130 Uncharacterized protein family UPF0054 CEW88_RS11515 PF02562 PhoH-like protein CEW88_RS11525 PF13488 Glycine zipper CEW88_RS11525 PF00691 OmpA family CEW88_RS11530 PF00919 Uncharacterized protein family UPF0004 CEW88_RS11530 PF01938 TRAM domain CEW88_RS11530 PF04055 Radical SAM superfamily CEW88_RS11550 PF07977 FabA-like domain CEW88_RS11555 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW88_RS11555 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW88_RS11565 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CEW88_RS11565 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CEW88_RS11615 PF01555 DNA methylase CEW88_RS11690 PF01037 Lrp/AsnC ligand binding domain CEW88_RS11695 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CEW88_RS11695 PF14850 DNA-binding domain of Proline dehydrogenase CEW88_RS11695 PF01619 Proline dehydrogenase CEW88_RS11695 PF00171 Aldehyde dehydrogenase family CEW88_RS11700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CEW88_RS11700 PF00672 HAMP domain CEW88_RS11705 PF01264 Chorismate synthase CEW88_RS11715 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11720 PF00005 ABC transporter CEW88_RS11725 PF02167 Cytochrome C1 family CEW88_RS11730 PF00033 Cytochrome b/b6/petB CEW88_RS11730 PF00032 Cytochrome b(C-terminal)/b6/petD CEW88_RS11735 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CEW88_RS11735 PF00355 Rieske [2Fe-2S] domain CEW88_RS11745 PF08274 PhnA Zinc-Ribbon CEW88_RS11745 PF03831 PhnA domain CEW88_RS11750 PF01066 CDP-alcohol phosphatidyltransferase CEW88_RS11755 PF02666 Phosphatidylserine decarboxylase CEW88_RS11760 PF00043 Glutathione S-transferase, C-terminal domain CEW88_RS11760 PF13417 Glutathione S-transferase, N-terminal domain CEW88_RS11765 PF00118 TCP-1/cpn60 chaperonin family CEW88_RS11770 PF00166 Chaperonin 10 Kd subunit CEW88_RS11775 PF00892 EamA-like transporter family CEW88_RS11790 PF01432 Peptidase family M3 CEW88_RS11795 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS11805 PF00899 ThiF family CEW88_RS11810 PF00692 dUTPase CEW88_RS11815 PF04127 DNA / pantothenate metabolism flavoprotein CEW88_RS11815 PF02441 Flavoprotein CEW88_RS11825 PF04545 Sigma-70, region 4 CEW88_RS11825 PF04542 Sigma-70 region 2 CEW88_RS11825 PF00140 Sigma-70 factor, region 1.2 CEW88_RS11830 PF13335 Magnesium chelatase, subunit ChlI C-terminal CEW88_RS11830 PF01078 Magnesium chelatase, subunit ChlI CEW88_RS11835 PF07859 alpha/beta hydrolase fold CEW88_RS11840 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CEW88_RS11840 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CEW88_RS11845 PF02021 Uncharacterised protein family UPF0102 CEW88_RS11850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS11860 PF08335 GlnD PII-uridylyltransferase CEW88_RS11860 PF01966 HD domain CEW88_RS11865 PF00313 'Cold-shock' DNA-binding domain CEW88_RS11870 PF00270 DEAD/DEAH box helicase CEW88_RS11870 PF00271 Helicase conserved C-terminal domain CEW88_RS11875 PF02386 Cation transport protein CEW88_RS11880 PF03023 Lipid II flippase MurJ CEW88_RS11885 PF13091 PLD-like domain CEW88_RS11895 PF00579 tRNA synthetases class I (W and Y) CEW88_RS11910 PF17864 RuvB AAA lid domain CEW88_RS11910 PF05496 Holliday junction DNA helicase RuvB P-loop domain CEW88_RS11910 PF05491 RuvB C-terminal winged helix domain CEW88_RS11915 PF01330 RuvA N terminal domain CEW88_RS11915 PF07499 RuvA, C-terminal domain CEW88_RS11920 PF02075 Crossover junction endodeoxyribonuclease RuvC CEW88_RS11940 PF01218 Coproporphyrinogen III oxidase CEW88_RS11950 PF08468 Methyltransferase small domain N-terminal CEW88_RS11950 PF05175 Methyltransferase small domain CEW88_RS11955 PF02617 ATP-dependent Clp protease adaptor protein ClpS CEW88_RS11965 PF07943 Penicillin-binding protein 5, C-terminal domain CEW88_RS11965 PF00768 D-alanyl-D-alanine carboxypeptidase CEW88_RS11970 PF01165 Ribosomal protein S21 CEW88_RS11980 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS11980 PF00107 Zinc-binding dehydrogenase CEW88_RS11990 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS11990 PF00107 Zinc-binding dehydrogenase CEW88_RS11995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CEW88_RS12000 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS12005 PF00561 alpha/beta hydrolase fold CEW88_RS12010 PF01509 TruB family pseudouridylate synthase (N terminal domain) CEW88_RS12010 PF16198 tRNA pseudouridylate synthase B C-terminal domain CEW88_RS12015 PF00561 alpha/beta hydrolase fold CEW88_RS12030 PF01022 Bacterial regulatory protein, arsR family CEW88_RS12035 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS12035 PF00501 AMP-binding enzyme CEW88_RS12040 PF00664 ABC transporter transmembrane region CEW88_RS12040 PF00005 ABC transporter CEW88_RS12060 PF12973 ChrR Cupin-like domain CEW88_RS12065 PF04542 Sigma-70 region 2 CEW88_RS12065 PF04545 Sigma-70, region 4 CEW88_RS12070 PF01593 Flavin containing amine oxidoreductase CEW88_RS12090 PF02586 SOS response associated peptidase (SRAP) CEW88_RS12095 PF00849 RNA pseudouridylate synthase CEW88_RS12100 PF14437 MafB19-like deaminase CEW88_RS12105 PF00849 RNA pseudouridylate synthase CEW88_RS12105 PF01479 S4 domain CEW88_RS12125 PF05816 Toxic anion resistance protein (TelA) CEW88_RS12150 PF00294 pfkB family carbohydrate kinase CEW88_RS12155 PF02580 D-Tyr-tRNA(Tyr) deacylase CEW88_RS12170 PF08173 Membrane bound YbgT-like protein CEW88_RS12175 PF02322 Cytochrome bd terminal oxidase subunit II CEW88_RS12180 PF01654 Cytochrome bd terminal oxidase subunit I CEW88_RS12185 PF00664 ABC transporter transmembrane region CEW88_RS12185 PF00005 ABC transporter CEW88_RS12190 PF00005 ABC transporter CEW88_RS12190 PF00664 ABC transporter transmembrane region CEW88_RS12210 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS12210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS12215 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CEW88_RS12215 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS12225 PF00468 Ribosomal protein L34 CEW88_RS12230 PF00825 Ribonuclease P CEW88_RS12235 PF01809 Putative membrane protein insertion efficiency factor CEW88_RS12240 PF01171 PP-loop family CEW88_RS12245 PF00563 EAL domain CEW88_RS12245 PF00990 Diguanylate cyclase, GGDEF domain CEW88_RS12245 PF03707 Bacterial signalling protein N terminal repeat CEW88_RS12250 PF02096 60Kd inner membrane protein CEW88_RS12250 PF14849 YidC periplasmic domain CEW88_RS12260 PF01926 50S ribosome-binding GTPase CEW88_RS12265 PF00696 Amino acid kinase family CEW88_RS12275 PF00005 ABC transporter CEW88_RS12280 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS12285 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS12290 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS12300 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS12305 PF01479 S4 domain CEW88_RS12305 PF00849 RNA pseudouridylate synthase CEW88_RS12310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CEW88_RS12315 PF16193 AAA C-terminal domain CEW88_RS12315 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS12315 PF12002 MgsA AAA+ ATPase C terminal CEW88_RS12320 PF13180 PDZ domain CEW88_RS12340 PF04055 Radical SAM superfamily CEW88_RS12350 PF00403 Heavy-metal-associated domain CEW88_RS12355 PF09278 MerR, DNA binding CEW88_RS12355 PF00376 MerR family regulatory protein CEW88_RS12360 PF17149 Periplasmic sensor domain found in signal transduction proteins CEW88_RS12360 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS12360 PF01627 Hpt domain CEW88_RS12360 PF00672 HAMP domain CEW88_RS12360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS12360 PF00072 Response regulator receiver domain CEW88_RS12370 PF00072 Response regulator receiver domain CEW88_RS12370 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS12375 PF01544 CorA-like Mg2+ transporter protein CEW88_RS12390 PF03144 Elongation factor Tu domain 2 CEW88_RS12390 PF00009 Elongation factor Tu GTP binding domain CEW88_RS12390 PF03143 Elongation factor Tu C-terminal domain CEW88_RS12395 PF01923 Cobalamin adenosyltransferase CEW88_RS12405 PF00106 short chain dehydrogenase CEW88_RS12415 PF03989 DNA gyrase C-terminal domain, beta-propeller CEW88_RS12415 PF00521 DNA gyrase/topoisomerase IV, subunit A CEW88_RS12420 PF01012 Electron transfer flavoprotein domain CEW88_RS12425 PF01012 Electron transfer flavoprotein domain CEW88_RS12425 PF00766 Electron transfer flavoprotein FAD-binding domain CEW88_RS12440 PF00005 ABC transporter CEW88_RS12445 PF03167 Uracil DNA glycosylase superfamily CEW88_RS12455 PF03576 Peptidase family S58 CEW88_RS12465 PF00171 Aldehyde dehydrogenase family CEW88_RS12470 PF00005 ABC transporter CEW88_RS12470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS12475 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS12475 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS12480 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS12485 PF09297 NADH pyrophosphatase zinc ribbon domain CEW88_RS12485 PF00293 NUDIX domain CEW88_RS12490 PF07969 Amidohydrolase family CEW88_RS12495 PF02222 ATP-grasp domain CEW88_RS12495 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CEW88_RS12500 PF00731 AIR carboxylase CEW88_RS12505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CEW88_RS12505 PF00056 lactate/malate dehydrogenase, NAD binding domain CEW88_RS12520 PF01293 Phosphoenolpyruvate carboxykinase CEW88_RS12525 PF00072 Response regulator receiver domain CEW88_RS12525 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS12530 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS12530 PF00672 HAMP domain CEW88_RS12530 PF13756 Stimulus-sensing domain CEW88_RS12530 PF13755 Sensor N-terminal transmembrane domain CEW88_RS12535 PF07475 HPr Serine kinase C-terminal domain CEW88_RS12535 PF02603 HPr Serine kinase N terminus CEW88_RS12540 PF03668 P-loop ATPase protein family CEW88_RS12550 PF00381 PTS HPr component phosphorylation site CEW88_RS12560 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS12560 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS12585 PF00355 Rieske [2Fe-2S] domain CEW88_RS12585 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CEW88_RS12600 PF02887 Pyruvate kinase, alpha/beta domain CEW88_RS12600 PF00224 Pyruvate kinase, barrel domain CEW88_RS12605 PF01632 Ribosomal protein L35 CEW88_RS12610 PF00453 Ribosomal protein L20 CEW88_RS12615 PF01409 tRNA synthetases class II core domain (F) CEW88_RS12615 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CEW88_RS12635 PF00133 tRNA synthetases class I (I, L, M and V) CEW88_RS12635 PF08264 Anticodon-binding domain of tRNA CEW88_RS12635 PF09334 tRNA synthetases class I (M) CEW88_RS12635 PF13603 Leucyl-tRNA synthetase, Domain 2 CEW88_RS12655 PF13181 Tetratricopeptide repeat CEW88_RS12660 PF01168 Alanine racemase, N-terminal domain CEW88_RS12665 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS12665 PF00155 Aminotransferase class I and II CEW88_RS12670 PF06574 FAD synthetase CEW88_RS12670 PF01687 Riboflavin kinase CEW88_RS12675 PF03692 Putative zinc- or iron-chelating domain CEW88_RS12680 PF01212 Beta-eliminating lyase CEW88_RS12700 PF17854 FtsK alpha domain CEW88_RS12700 PF01580 FtsK/SpoIIIE family CEW88_RS12700 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CEW88_RS12700 PF09397 Ftsk gamma domain CEW88_RS12705 PF00155 Aminotransferase class I and II CEW88_RS12710 PF07687 Peptidase dimerisation domain CEW88_RS12710 PF01546 Peptidase family M20/M25/M40 CEW88_RS12715 PF08206 Ribonuclease B OB domain CEW88_RS12715 PF00773 RNB domain CEW88_RS12715 PF00575 S1 RNA binding domain CEW88_RS12715 PF17876 Cold shock domain CEW88_RS12715 PF08461 Ribonuclease R winged-helix domain CEW88_RS12725 PF08279 HTH domain CEW88_RS12725 PF13280 WYL domain CEW88_RS12730 PF13406 Transglycosylase SLT domain CEW88_RS12740 PF00293 NUDIX domain CEW88_RS12745 PF03572 Peptidase family S41 CEW88_RS12745 PF13180 PDZ domain CEW88_RS12755 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CEW88_RS12755 PF01676 Metalloenzyme superfamily CEW88_RS12760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS12770 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS12800 PF02594 Uncharacterised ACR, YggU family COG1872 CEW88_RS12805 PF00881 Nitroreductase family CEW88_RS12845 PF00152 tRNA synthetases class II (D, K and N) CEW88_RS12845 PF01336 OB-fold nucleic acid binding domain CEW88_RS12845 PF02938 GAD domain CEW88_RS12855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW88_RS12855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEW88_RS12855 PF02142 MGS-like domain CEW88_RS12860 PF00005 ABC transporter CEW88_RS12865 PF00005 ABC transporter CEW88_RS12870 PF11862 Domain of unknown function (DUF3382) CEW88_RS12870 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS12875 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS12880 PF13458 Periplasmic binding protein CEW88_RS12895 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS12900 PF03459 TOBE domain CEW88_RS12900 PF00005 ABC transporter CEW88_RS12930 PF02517 CPBP intramembrane metalloprotease CEW88_RS12935 PF01039 Carboxyl transferase domain CEW88_RS12935 PF17848 Acetyl-coA carboxylase zinc finger domain CEW88_RS12940 PF02875 Mur ligase family, glutamate ligase domain CEW88_RS12940 PF08245 Mur ligase middle domain CEW88_RS12945 PF03969 AFG1-like ATPase CEW88_RS12950 PF07690 Major Facilitator Superfamily CEW88_RS12955 PF12697 Alpha/beta hydrolase family CEW88_RS12955 PF08241 Methyltransferase domain CEW88_RS12965 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CEW88_RS12970 PF00756 Putative esterase CEW88_RS12975 PF03547 Membrane transport protein CEW88_RS12985 PF00005 ABC transporter CEW88_RS12990 PF01230 HIT domain CEW88_RS13020 PF17863 AAA lid domain CEW88_RS13020 PF07726 ATPase family associated with various cellular activities (AAA) CEW88_RS13065 PF01546 Peptidase family M20/M25/M40 CEW88_RS13110 PF00580 UvrD/REP helicase N-terminal domain CEW88_RS13110 PF13361 UvrD-like helicase C-terminal domain CEW88_RS13110 PF12705 PD-(D/E)XK nuclease superfamily CEW88_RS13125 PF02371 Transposase IS116/IS110/IS902 family CEW88_RS13125 PF01548 Transposase CEW88_RS13155 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEW88_RS13155 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS13155 PF05362 Lon protease (S16) C-terminal proteolytic domain CEW88_RS13160 PF02867 Ribonucleotide reductase, barrel domain CEW88_RS13160 PF00317 Ribonucleotide reductase, all-alpha domain CEW88_RS13160 PF03477 ATP cone domain CEW88_RS13175 PF02608 ABC transporter substrate-binding protein PnrA-like CEW88_RS13180 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS13185 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS13190 PF00005 ABC transporter CEW88_RS13200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS13200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW88_RS13205 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS13205 PF01799 [2Fe-2S] binding domain CEW88_RS13215 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEW88_RS13215 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEW88_RS13215 PF14579 Helix-hairpin-helix motif CEW88_RS13215 PF02811 PHP domain CEW88_RS13225 PF04102 SlyX CEW88_RS13235 PF03129 Anticodon binding domain CEW88_RS13235 PF13393 Histidyl-tRNA synthetase CEW88_RS13240 PF13393 Histidyl-tRNA synthetase CEW88_RS13245 PF01634 ATP phosphoribosyltransferase CEW88_RS13250 PF02798 Glutathione S-transferase, N-terminal domain CEW88_RS13255 PF00271 Helicase conserved C-terminal domain CEW88_RS13255 PF00270 DEAD/DEAH box helicase CEW88_RS13255 PF08494 DEAD/H associated CEW88_RS13265 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CEW88_RS13265 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CEW88_RS13275 PF01268 Formate--tetrahydrofolate ligase CEW88_RS13285 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS13285 PF06480 FtsH Extracellular CEW88_RS13285 PF17862 AAA+ lid domain CEW88_RS13285 PF01434 Peptidase family M41 CEW88_RS13290 PF01171 PP-loop family CEW88_RS13300 PF00691 OmpA family CEW88_RS13305 PF07676 WD40-like Beta Propeller Repeat CEW88_RS13305 PF04052 TolB amino-terminal domain CEW88_RS13315 PF02472 Biopolymer transport protein ExbD/TolR CEW88_RS13320 PF01618 MotA/TolQ/ExbB proton channel family CEW88_RS13325 PF03061 Thioesterase superfamily CEW88_RS13345 PF01063 Amino-transferase class IV CEW88_RS13350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEW88_RS13350 PF13378 Enolase C-terminal domain-like CEW88_RS13360 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW88_RS13365 PF08443 RimK-like ATP-grasp domain CEW88_RS13365 PF18030 RimK PreATP-grasp domain CEW88_RS13370 PF00920 Dehydratase family CEW88_RS13375 PF05199 GMC oxidoreductase CEW88_RS13375 PF00732 GMC oxidoreductase CEW88_RS13380 PF01037 Lrp/AsnC ligand binding domain CEW88_RS13390 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CEW88_RS13425 PF00005 ABC transporter CEW88_RS13430 PF09383 NIL domain CEW88_RS13430 PF00005 ABC transporter CEW88_RS13435 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS13435 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS13440 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS13445 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS13450 PF01402 Ribbon-helix-helix protein, copG family CEW88_RS13450 PF08753 NikR C terminal nickel binding domain CEW88_RS13455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS13460 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS13465 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS13475 PF01032 FecCD transport family CEW88_RS13480 PF00005 ABC transporter CEW88_RS13500 PF00873 AcrB/AcrD/AcrF family CEW88_RS13545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CEW88_RS13550 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS13560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS13560 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS13565 PF03069 Acetamidase/Formamidase family CEW88_RS13570 PF00873 AcrB/AcrD/AcrF family CEW88_RS13575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS13575 PF00529 HlyD membrane-fusion protein of T1SS CEW88_RS13585 PF07702 UTRA domain CEW88_RS13585 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS13590 PF00005 ABC transporter CEW88_RS13595 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS13600 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS13605 PF01464 Transglycosylase SLT domain CEW88_RS13605 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS13610 PF01565 FAD binding domain CEW88_RS13610 PF02913 FAD linked oxidases, C-terminal domain CEW88_RS13615 PF01175 Urocanase Rossmann-like domain CEW88_RS13615 PF17392 Urocanase C-terminal domain CEW88_RS13615 PF17391 Urocanase N-terminal domain CEW88_RS13625 PF00221 Aromatic amino acid lyase CEW88_RS13630 PF01979 Amidohydrolase family CEW88_RS13635 PF00296 Luciferase-like monooxygenase CEW88_RS13640 PF01594 AI-2E family transporter CEW88_RS13650 PF03631 Virulence factor BrkB CEW88_RS13655 PF00781 Diacylglycerol kinase catalytic domain CEW88_RS13675 PF01625 Peptide methionine sulfoxide reductase CEW88_RS13680 PF01641 SelR domain CEW88_RS13690 PF08331 Domain of unknown function (DUF1730) CEW88_RS13695 PF03129 Anticodon binding domain CEW88_RS13695 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CEW88_RS13700 PF01594 AI-2E family transporter CEW88_RS13710 PF02503 Polyphosphate kinase middle domain CEW88_RS13710 PF13089 Polyphosphate kinase N-terminal domain CEW88_RS13710 PF13090 Polyphosphate kinase C-terminal domain 2 CEW88_RS13710 PF17941 Polyphosphate kinase C-terminal domain 1 CEW88_RS13715 PF02541 Ppx/GppA phosphatase family CEW88_RS13730 PF00226 DnaJ domain CEW88_RS13730 PF05099 Tellurite resistance protein TerB CEW88_RS13745 PF01642 Methylmalonyl-CoA mutase CEW88_RS13745 PF02310 B12 binding domain CEW88_RS13755 PF02785 Biotin carboxylase C-terminal domain CEW88_RS13755 PF00364 Biotin-requiring enzyme CEW88_RS13755 PF00289 Biotin carboxylase, N-terminal domain CEW88_RS13755 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CEW88_RS13755 PF18140 Propionyl-coenzyme A carboxylase BT domain CEW88_RS13780 PF01039 Carboxyl transferase domain CEW88_RS13785 PF07690 Major Facilitator Superfamily CEW88_RS13790 PF09856 Predicted transcriptional regulator (DUF2083) CEW88_RS13790 PF06114 IrrE N-terminal-like domain CEW88_RS13790 PF01381 Helix-turn-helix CEW88_RS13800 PF02686 Glu-tRNAGln amidotransferase C subunit CEW88_RS13805 PF01425 Amidase CEW88_RS13815 PF01510 N-acetylmuramoyl-L-alanine amidase CEW88_RS13820 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW88_RS13840 PF00117 Glutamine amidotransferase class-I CEW88_RS13840 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CEW88_RS13850 PF07729 FCD domain CEW88_RS13850 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS13865 PF01494 FAD binding domain CEW88_RS13870 PF01464 Transglycosylase SLT domain CEW88_RS13870 PF14718 Soluble lytic murein transglycosylase L domain CEW88_RS13875 PF00701 Dihydrodipicolinate synthetase family CEW88_RS13880 PF05193 Peptidase M16 inactive domain CEW88_RS13885 PF00675 Insulinase (Peptidase family M16) CEW88_RS13885 PF05193 Peptidase M16 inactive domain CEW88_RS13895 PF01252 Signal peptidase (SPase) II CEW88_RS13905 PF01011 PQQ enzyme repeat CEW88_RS13910 PF13360 PQQ-like domain CEW88_RS13915 PF02142 MGS-like domain CEW88_RS13915 PF01808 AICARFT/IMPCHase bienzyme CEW88_RS13925 PF01189 16S rRNA methyltransferase RsmB/F CEW88_RS13925 PF01029 NusB family CEW88_RS13935 PF05173 Dihydrodipicolinate reductase, C-terminus CEW88_RS13935 PF01113 Dihydrodipicolinate reductase, N-terminus CEW88_RS13940 PF02033 Ribosome-binding factor A CEW88_RS13945 PF09992 Phosphodiester glycosidase CEW88_RS13950 PF01523 Putative modulator of DNA gyrase CEW88_RS13955 PF00459 Inositol monophosphatase family CEW88_RS13965 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CEW88_RS13970 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CEW88_RS13975 PF00171 Aldehyde dehydrogenase family CEW88_RS13980 PF00578 AhpC/TSA family CEW88_RS13980 PF10417 C-terminal domain of 1-Cys peroxiredoxin CEW88_RS13985 PF05552 Conserved TM helix CEW88_RS13985 PF00924 Mechanosensitive ion channel CEW88_RS13990 PF05977 Transmembrane secretion effector CEW88_RS13995 PF00464 Serine hydroxymethyltransferase CEW88_RS14005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS14010 PF00175 Oxidoreductase NAD-binding domain CEW88_RS14010 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS14010 PF00970 Oxidoreductase FAD-binding domain CEW88_RS14015 PF02508 Rnf-Nqr subunit, membrane protein CEW88_RS14020 PF02508 Rnf-Nqr subunit, membrane protein CEW88_RS14025 PF04205 FMN-binding domain CEW88_RS14030 PF03116 NQR2, RnfD, RnfE family CEW88_RS14035 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) CEW88_RS14035 PF11973 NQRA C-terminal domain CEW88_RS14040 PF02424 ApbE family CEW88_RS14060 PF13593 SBF-like CPA transporter family (DUF4137) CEW88_RS14070 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS14085 PF03466 LysR substrate binding domain CEW88_RS14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS14095 PF02073 Thermophilic metalloprotease (M29) CEW88_RS14105 PF01384 Phosphate transporter family CEW88_RS14110 PF00270 DEAD/DEAH box helicase CEW88_RS14110 PF00271 Helicase conserved C-terminal domain CEW88_RS14115 PF07690 Major Facilitator Superfamily CEW88_RS14120 PF13533 Biotin-lipoyl like CEW88_RS14125 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS14125 PF16859 Tetracyclin repressor-like, C-terminal domain CEW88_RS14130 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEW88_RS14135 PF00491 Arginase family CEW88_RS14145 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS14145 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS14155 PF05336 L-rhamnose mutarotase CEW88_RS14160 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14165 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14170 PF00005 ABC transporter CEW88_RS14175 PF13407 Periplasmic binding protein domain CEW88_RS14180 PF08220 DeoR-like helix-turn-helix domain CEW88_RS14180 PF00455 DeoR C terminal sensor domain CEW88_RS14185 PF00596 Class II Aldolase and Adducin N-terminal domain CEW88_RS14190 PF01261 Xylose isomerase-like TIM barrel CEW88_RS14195 PF07506 RepB plasmid partitioning protein CEW88_RS14195 PF02195 ParB-like nuclease domain CEW88_RS14200 PF13614 AAA domain CEW88_RS14210 PF13407 Periplasmic binding protein domain CEW88_RS14215 PF00005 ABC transporter CEW88_RS14220 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14225 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14230 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS14230 PF07729 FCD domain CEW88_RS14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS14235 PF03466 LysR substrate binding domain CEW88_RS14240 PF13407 Periplasmic binding protein domain CEW88_RS14245 PF00005 ABC transporter CEW88_RS14250 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14255 PF00920 Dehydratase family CEW88_RS14260 PF08450 SMP-30/Gluconolactonase/LRE-like region CEW88_RS14265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS14270 PF01263 Aldose 1-epimerase CEW88_RS14280 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS14305 PF01618 MotA/TolQ/ExbB proton channel family CEW88_RS14325 PF00501 AMP-binding enzyme CEW88_RS14325 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS14335 PF00501 AMP-binding enzyme CEW88_RS14335 PF00668 Condensation domain CEW88_RS14335 PF00975 Thioesterase domain CEW88_RS14335 PF00550 Phosphopantetheine attachment site CEW88_RS14350 PF01032 FecCD transport family CEW88_RS14355 PF00005 ABC transporter CEW88_RS14365 PF01555 DNA methylase CEW88_RS14365 PF18755 Restriction Enzyme Adenine Methylase Associated CEW88_RS14370 PF01351 Ribonuclease HII CEW88_RS14375 PF02899 Phage integrase, N-terminal SAM-like domain CEW88_RS14375 PF00589 Phage integrase family CEW88_RS14390 PF00072 Response regulator receiver domain CEW88_RS14390 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS14395 PF00582 Universal stress protein family CEW88_RS14400 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS14420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEW88_RS14420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEW88_RS14420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEW88_RS14430 PF13439 Glycosyltransferase Family 4 CEW88_RS14430 PF00534 Glycosyl transferases group 1 CEW88_RS14435 PF00534 Glycosyl transferases group 1 CEW88_RS14435 PF13579 Glycosyl transferase 4-like domain CEW88_RS14450 PF00296 Luciferase-like monooxygenase CEW88_RS14455 PF00857 Isochorismatase family CEW88_RS14460 PF01042 Endoribonuclease L-PSP CEW88_RS14465 PF00561 alpha/beta hydrolase fold CEW88_RS14480 PF02630 SCO1/SenC CEW88_RS14485 PF13406 Transglycosylase SLT domain CEW88_RS14525 PF00860 Permease family CEW88_RS14530 PF04115 Ureidoglycolate lyase CEW88_RS14535 PF05899 Protein of unknown function (DUF861) CEW88_RS14535 PF07883 Cupin domain CEW88_RS14545 PF01668 SmpB protein CEW88_RS14550 PF00581 Rhodanese-like domain CEW88_RS14555 PF00155 Aminotransferase class I and II CEW88_RS14570 PF01791 DeoC/LacD family aldolase CEW88_RS14575 PF00171 Aldehyde dehydrogenase family CEW88_RS14585 PF02590 Predicted SPOUT methyltransferase CEW88_RS14590 PF02673 Bacitracin resistance protein BacA CEW88_RS14595 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CEW88_RS14595 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS14605 PF01645 Conserved region in glutamate synthase CEW88_RS14605 PF04898 Glutamate synthase central domain CEW88_RS14605 PF00310 Glutamine amidotransferases class-II CEW88_RS14605 PF01493 GXGXG motif CEW88_RS14610 PF00912 Transglycosylase CEW88_RS14615 PF00043 Glutathione S-transferase, C-terminal domain CEW88_RS14615 PF13417 Glutathione S-transferase, N-terminal domain CEW88_RS14620 PF00857 Isochorismatase family CEW88_RS14620 PF00550 Phosphopantetheine attachment site CEW88_RS14625 PF00425 chorismate binding enzyme CEW88_RS14635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS14635 PF03466 LysR substrate binding domain CEW88_RS14645 PF04143 Sulphur transport CEW88_RS14655 PF07690 Major Facilitator Superfamily CEW88_RS14660 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CEW88_RS14670 PF02224 Cytidylate kinase CEW88_RS14675 PF00248 Aldo/keto reductase family CEW88_RS14685 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CEW88_RS14685 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CEW88_RS14695 PF01928 CYTH domain CEW88_RS14700 PF13462 Thioredoxin CEW88_RS14710 PF00730 HhH-GPD superfamily base excision DNA repair protein CEW88_RS14710 PF14815 NUDIX domain CEW88_RS14715 PF00487 Fatty acid desaturase CEW88_RS14720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEW88_RS14725 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CEW88_RS14725 PF02885 Glycosyl transferase family, helical bundle domain CEW88_RS14725 PF00591 Glycosyl transferase family, a/b domain CEW88_RS14730 PF01676 Metalloenzyme superfamily CEW88_RS14735 PF00962 Adenosine/AMP deaminase CEW88_RS14755 PF00445 Ribonuclease T2 family CEW88_RS14775 PF13662 Toprim domain CEW88_RS14775 PF02132 RecR protein CEW88_RS14780 PF02575 YbaB/EbfC DNA-binding family CEW88_RS14790 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CEW88_RS14790 PF12170 DNA polymerase III tau subunit V interacting with alpha CEW88_RS14790 PF12169 DNA polymerase III subunits gamma and tau domain III CEW88_RS14800 PF04228 Putative neutral zinc metallopeptidase CEW88_RS14815 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEW88_RS14815 PF00753 Metallo-beta-lactamase superfamily CEW88_RS14815 PF10996 Beta-Casp domain CEW88_RS14820 PF02896 PEP-utilising enzyme, TIM barrel domain CEW88_RS14820 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CEW88_RS14820 PF00391 PEP-utilising enzyme, mobile domain CEW88_RS14825 PF02256 Iron hydrogenase small subunit CEW88_RS14825 PF02906 Iron only hydrogenase large subunit, C-terminal domain CEW88_RS14825 PF00037 4Fe-4S binding domain CEW88_RS14825 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW88_RS14830 PF01235 Sodium:alanine symporter family CEW88_RS14835 PF01037 Lrp/AsnC ligand binding domain CEW88_RS14840 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEW88_RS14840 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CEW88_RS14850 PF01761 3-dehydroquinate synthase CEW88_RS14875 PF01026 TatD related DNase CEW88_RS14890 PF00005 ABC transporter CEW88_RS14895 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14900 PF13407 Periplasmic binding protein domain CEW88_RS14905 PF00480 ROK family CEW88_RS14915 PF03150 Di-haem cytochrome c peroxidase CEW88_RS14915 PF00034 Cytochrome c CEW88_RS14920 PF08402 TOBE domain CEW88_RS14920 PF00005 ABC transporter CEW88_RS14925 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS14930 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS14940 PF00005 ABC transporter CEW88_RS14945 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS14945 PF00005 ABC transporter CEW88_RS14955 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS14965 PF14403 Circularly permuted ATP-grasp type 2 CEW88_RS14985 PF03975 CheD chemotactic sensory transduction CEW88_RS14990 PF01339 CheB methylesterase CEW88_RS14990 PF00072 Response regulator receiver domain CEW88_RS15000 PF00072 Response regulator receiver domain CEW88_RS15005 PF01739 CheR methyltransferase, SAM binding domain CEW88_RS15005 PF03705 CheR methyltransferase, all-alpha domain CEW88_RS15010 PF01584 CheW-like domain CEW88_RS15015 PF01584 CheW-like domain CEW88_RS15015 PF02895 Signal transducing histidine kinase, homodimeric domain CEW88_RS15015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS15015 PF01627 Hpt domain CEW88_RS15020 PF00072 Response regulator receiver domain CEW88_RS15020 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS15030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CEW88_RS15030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CEW88_RS15030 PF00205 Thiamine pyrophosphate enzyme, central domain CEW88_RS15045 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS15055 PF00005 ABC transporter CEW88_RS15060 PF01032 FecCD transport family CEW88_RS15070 PF00593 TonB dependent receptor CEW88_RS15070 PF07715 TonB-dependent Receptor Plug Domain CEW88_RS15080 PF00005 ABC transporter CEW88_RS15090 PF00245 Alkaline phosphatase CEW88_RS15100 PF13407 Periplasmic binding protein domain CEW88_RS15105 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS15110 PF00005 ABC transporter CEW88_RS15115 PF16990 Carbohydrate binding module (family 35) CEW88_RS15115 PF02837 Glycosyl hydrolases family 2, sugar binding domain CEW88_RS15115 PF00703 Glycosyl hydrolases family 2 CEW88_RS15115 PF18368 Exo-beta-D-glucosaminidase Ig-fold domain CEW88_RS15125 PF05532 CsbD-like CEW88_RS15150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS15150 PF00986 DNA gyrase B subunit, carboxyl terminus CEW88_RS15150 PF00204 DNA gyrase B CEW88_RS15150 PF01751 Toprim domain CEW88_RS15170 PF00186 Dihydrofolate reductase CEW88_RS15175 PF00303 Thymidylate synthase CEW88_RS15190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS15205 PF12802 MarR family CEW88_RS15215 PF01381 Helix-turn-helix CEW88_RS15220 PF00155 Aminotransferase class I and II CEW88_RS15235 PF12411 Choline sulfatase enzyme C terminal CEW88_RS15235 PF00884 Sulfatase CEW88_RS15240 PF02028 BCCT, betaine/carnitine/choline family transporter CEW88_RS15250 PF00459 Inositol monophosphatase family CEW88_RS15265 PF00582 Universal stress protein family CEW88_RS15275 PF16868 NMT1-like family CEW88_RS15290 PF00005 ABC transporter CEW88_RS15290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS15295 PF00005 ABC transporter CEW88_RS15295 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS15300 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15300 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS15305 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS15315 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS15315 PF07729 FCD domain CEW88_RS15320 PF04955 HupE / UreJ protein CEW88_RS15330 PF00072 Response regulator receiver domain CEW88_RS15335 PF08448 PAS fold CEW88_RS15335 PF03705 CheR methyltransferase, all-alpha domain CEW88_RS15335 PF01739 CheR methyltransferase, SAM binding domain CEW88_RS15335 PF01339 CheB methylesterase CEW88_RS15340 PF13581 Histidine kinase-like ATPase domain CEW88_RS15340 PF13426 PAS domain CEW88_RS15340 PF07536 HWE histidine kinase CEW88_RS15370 PF00202 Aminotransferase class-III CEW88_RS15375 PF00171 Aldehyde dehydrogenase family CEW88_RS15380 PF01037 Lrp/AsnC ligand binding domain CEW88_RS15390 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS15395 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS15400 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS15405 PF00582 Universal stress protein family CEW88_RS15415 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS15420 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEW88_RS15425 PF01321 Creatinase/Prolidase N-terminal domain CEW88_RS15425 PF00557 Metallopeptidase family M24 CEW88_RS15445 PF01702 Queuine tRNA-ribosyltransferase CEW88_RS15450 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEW88_RS15455 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS15455 PF05362 Lon protease (S16) C-terminal proteolytic domain CEW88_RS15455 PF02190 ATP-dependent protease La (LON) substrate-binding domain CEW88_RS15465 PF00376 MerR family regulatory protein CEW88_RS15465 PF09278 MerR, DNA binding CEW88_RS15495 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CEW88_RS15575 PF04860 Phage portal protein CEW88_RS15580 PF00574 Clp protease CEW88_RS15710 PF13737 Transposase DDE domain CEW88_RS15720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS15725 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS15730 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS15745 PF13416 Bacterial extracellular solute-binding protein CEW88_RS15750 PF00005 ABC transporter CEW88_RS15750 PF08402 TOBE domain CEW88_RS15755 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15760 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15765 PF03576 Peptidase family S58 CEW88_RS15770 PF00005 ABC transporter CEW88_RS15770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS15775 PF03069 Acetamidase/Formamidase family CEW88_RS15780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS15785 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15790 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS15790 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15815 PF04945 YHS domain CEW88_RS15830 PF00394 Multicopper oxidase CEW88_RS15830 PF07731 Multicopper oxidase CEW88_RS15830 PF07732 Multicopper oxidase CEW88_RS15835 PF07732 Multicopper oxidase CEW88_RS15835 PF10518 TAT (twin-arginine translocation) pathway signal sequence CEW88_RS15835 PF00394 Multicopper oxidase CEW88_RS15835 PF07731 Multicopper oxidase CEW88_RS15850 PF00384 Molybdopterin oxidoreductase CEW88_RS15850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW88_RS15850 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CEW88_RS15855 PF00480 ROK family CEW88_RS15860 PF01547 Bacterial extracellular solute-binding protein CEW88_RS15865 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15870 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS15875 PF00206 Lyase CEW88_RS15875 PF14698 Argininosuccinate lyase C-terminal CEW88_RS15880 PF00005 ABC transporter CEW88_RS15880 PF17912 MalK OB fold domain CEW88_RS15885 PF00480 ROK family CEW88_RS15890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEW88_RS15895 PF07729 FCD domain CEW88_RS15895 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS15910 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS15915 PF02502 Ribose/Galactose Isomerase CEW88_RS15920 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS15920 PF00970 Oxidoreductase FAD-binding domain CEW88_RS15920 PF00175 Oxidoreductase NAD-binding domain CEW88_RS15930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS15930 PF03466 LysR substrate binding domain CEW88_RS15935 PF01571 Aminomethyltransferase folate-binding domain CEW88_RS15935 PF16350 FAD dependent oxidoreductase central domain CEW88_RS15935 PF01266 FAD dependent oxidoreductase CEW88_RS15935 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW88_RS15940 PF00766 Electron transfer flavoprotein FAD-binding domain CEW88_RS15940 PF01012 Electron transfer flavoprotein domain CEW88_RS15945 PF01012 Electron transfer flavoprotein domain CEW88_RS15950 PF10114 Sensory domain found in PocR CEW88_RS15950 PF12833 Helix-turn-helix domain CEW88_RS15955 PF02028 BCCT, betaine/carnitine/choline family transporter CEW88_RS15960 PF01266 FAD dependent oxidoreductase CEW88_RS15970 PF01571 Aminomethyltransferase folate-binding domain CEW88_RS15970 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW88_RS15970 PF17806 Sarcosine oxidase A3 domain CEW88_RS15970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS15980 PF00464 Serine hydroxymethyltransferase CEW88_RS15985 PF00551 Formyl transferase CEW88_RS15990 PF01070 FMN-dependent dehydrogenase CEW88_RS15995 PF01699 Sodium/calcium exchanger protein CEW88_RS16000 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS16000 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS16010 PF00296 Luciferase-like monooxygenase CEW88_RS16015 PF00248 Aldo/keto reductase family CEW88_RS16020 PF01613 Flavin reductase like domain CEW88_RS16030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS16040 PF03601 Conserved hypothetical protein 698 CEW88_RS16045 PF03466 LysR substrate binding domain CEW88_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16060 PF16347 Domain of unknown function (DUF4976) CEW88_RS16060 PF00884 Sulfatase CEW88_RS16090 PF06426 Serine acetyltransferase, N-terminal CEW88_RS16090 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS16100 PF01546 Peptidase family M20/M25/M40 CEW88_RS16100 PF07687 Peptidase dimerisation domain CEW88_RS16105 PF03466 LysR substrate binding domain CEW88_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CEW88_RS16110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CEW88_RS16115 PF00171 Aldehyde dehydrogenase family CEW88_RS16130 PF02515 CoA-transferase family III CEW88_RS16135 PF05199 GMC oxidoreductase CEW88_RS16135 PF00732 GMC oxidoreductase CEW88_RS16140 PF03466 LysR substrate binding domain CEW88_RS16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16160 PF10503 Esterase PHB depolymerase CEW88_RS16175 PF13737 Transposase DDE domain CEW88_RS16195 PF02151 UvrB/uvrC motif CEW88_RS16195 PF12344 Ultra-violet resistance protein B CEW88_RS16195 PF17757 UvrB interaction domain CEW88_RS16195 PF00271 Helicase conserved C-terminal domain CEW88_RS16195 PF04851 Type III restriction enzyme, res subunit CEW88_RS16220 PF01594 AI-2E family transporter CEW88_RS16225 PF13091 PLD-like domain CEW88_RS16270 PF00005 ABC transporter CEW88_RS16270 PF08402 TOBE domain CEW88_RS16275 PF13416 Bacterial extracellular solute-binding protein CEW88_RS16280 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS16285 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS16290 PF00005 ABC transporter CEW88_RS16300 PF05025 RbsD / FucU transport protein family CEW88_RS16310 PF01590 GAF domain CEW88_RS16310 PF08446 PAS fold CEW88_RS16310 PF00360 Phytochrome region CEW88_RS16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS16310 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS16320 PF02811 PHP domain CEW88_RS16320 PF14579 Helix-hairpin-helix motif CEW88_RS16320 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CEW88_RS16320 PF07733 Bacterial DNA polymerase III alpha NTPase domain CEW88_RS16320 PF01336 OB-fold nucleic acid binding domain CEW88_RS16335 PF04377 Arginine-tRNA-protein transferase, C terminus CEW88_RS16335 PF04376 Arginine-tRNA-protein transferase, N terminus CEW88_RS16360 PF08335 GlnD PII-uridylyltransferase CEW88_RS16360 PF03710 Glutamate-ammonia ligase adenylyltransferase CEW88_RS16370 PF01081 KDPG and KHG aldolase CEW88_RS16375 PF00920 Dehydratase family CEW88_RS16385 PF10672 S-adenosylmethionine-dependent methyltransferase CEW88_RS16385 PF17785 PUA-like domain CEW88_RS16395 PF03334 Na+/H+ antiporter subunit CEW88_RS16400 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CEW88_RS16405 PF01899 Na+/H+ ion antiporter subunit CEW88_RS16410 PF00361 Proton-conducting membrane transporter CEW88_RS16415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CEW88_RS16420 PF13244 Domain of unknown function (DUF4040) CEW88_RS16420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CEW88_RS16420 PF00361 Proton-conducting membrane transporter CEW88_RS16420 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CEW88_RS16425 PF08402 TOBE domain CEW88_RS16425 PF00005 ABC transporter CEW88_RS16450 PF13417 Glutathione S-transferase, N-terminal domain CEW88_RS16450 PF00043 Glutathione S-transferase, C-terminal domain CEW88_RS16475 PF03144 Elongation factor Tu domain 2 CEW88_RS16475 PF16658 Class II release factor RF3, C-terminal domain CEW88_RS16475 PF00009 Elongation factor Tu GTP binding domain CEW88_RS16490 PF00106 short chain dehydrogenase CEW88_RS16495 PF08713 DNA alkylation repair enzyme CEW88_RS16500 PF05145 Transition state regulatory protein AbrB CEW88_RS16505 PF00034 Cytochrome c CEW88_RS16510 PF07995 Glucose / Sorbosone dehydrogenase CEW88_RS16515 PF00155 Aminotransferase class I and II CEW88_RS16525 PF00034 Cytochrome c CEW88_RS16530 PF00174 Oxidoreductase molybdopterin binding domain CEW88_RS16535 PF00149 Calcineurin-like phosphoesterase CEW88_RS16535 PF02872 5'-nucleotidase, C-terminal domain CEW88_RS16565 PF02683 Cytochrome C biogenesis protein transmembrane region CEW88_RS16575 PF01022 Bacterial regulatory protein, arsR family CEW88_RS16580 PF04143 Sulphur transport CEW88_RS16590 PF00171 Aldehyde dehydrogenase family CEW88_RS16595 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS16600 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS16605 PF08402 TOBE domain CEW88_RS16605 PF00005 ABC transporter CEW88_RS16610 PF13416 Bacterial extracellular solute-binding protein CEW88_RS16615 PF03466 LysR substrate binding domain CEW88_RS16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16625 PF01037 Lrp/AsnC ligand binding domain CEW88_RS16640 PF00005 ABC transporter CEW88_RS16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16655 PF03466 LysR substrate binding domain CEW88_RS16660 PF07969 Amidohydrolase family CEW88_RS16670 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CEW88_RS16670 PF01266 FAD dependent oxidoreductase CEW88_RS16680 PF07687 Peptidase dimerisation domain CEW88_RS16680 PF01546 Peptidase family M20/M25/M40 CEW88_RS16690 PF00892 EamA-like transporter family CEW88_RS16695 PF00158 Sigma-54 interaction domain CEW88_RS16695 PF02954 Bacterial regulatory protein, Fis family CEW88_RS16695 PF00072 Response regulator receiver domain CEW88_RS16700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS16700 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS16715 PF16868 NMT1-like family CEW88_RS16720 PF11791 Aconitate B N-terminal domain CEW88_RS16720 PF06434 Aconitate hydratase 2 N-terminus CEW88_RS16720 PF00330 Aconitase family (aconitate hydratase) CEW88_RS16730 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS16730 PF01799 [2Fe-2S] binding domain CEW88_RS16730 PF10518 TAT (twin-arginine translocation) pathway signal sequence CEW88_RS16735 PF00941 FAD binding domain in molybdopterin dehydrogenase CEW88_RS16735 PF03450 CO dehydrogenase flavoprotein C-terminal domain CEW88_RS16740 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW88_RS16740 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS16745 PF00664 ABC transporter transmembrane region CEW88_RS16745 PF00005 ABC transporter CEW88_RS16750 PF13439 Glycosyltransferase Family 4 CEW88_RS16750 PF00534 Glycosyl transferases group 1 CEW88_RS16755 PF06463 Molybdenum Cofactor Synthesis C CEW88_RS16755 PF04055 Radical SAM superfamily CEW88_RS16760 PF01757 Acyltransferase family CEW88_RS16765 PF16193 AAA C-terminal domain CEW88_RS16765 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS16765 PF12002 MgsA AAA+ ATPase C terminal CEW88_RS16770 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW88_RS16775 PF01070 FMN-dependent dehydrogenase CEW88_RS16780 PF02535 ZIP Zinc transporter CEW88_RS16785 PF01063 Amino-transferase class IV CEW88_RS16800 PF01106 NifU-like domain CEW88_RS16805 PF00814 Glycoprotease family CEW88_RS16815 PF02608 ABC transporter substrate-binding protein PnrA-like CEW88_RS16820 PF00005 ABC transporter CEW88_RS16825 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS16830 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS16835 PF01925 Sulfite exporter TauE/SafE CEW88_RS16850 PF01546 Peptidase family M20/M25/M40 CEW88_RS16860 PF00072 Response regulator receiver domain CEW88_RS16860 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS16865 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS16865 PF08448 PAS fold CEW88_RS16865 PF13188 PAS domain CEW88_RS16865 PF00072 Response regulator receiver domain CEW88_RS16870 PF00501 AMP-binding enzyme CEW88_RS16875 PF00005 ABC transporter CEW88_RS16875 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS16880 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS16900 PF00005 ABC transporter CEW88_RS16905 PF02834 LigT like Phosphoesterase CEW88_RS16910 PF14535 AMP-binding enzyme C-terminal domain CEW88_RS16910 PF00501 AMP-binding enzyme CEW88_RS16925 PF17674 HHH domain CEW88_RS16925 PF00575 S1 RNA binding domain CEW88_RS16925 PF09371 Tex-like protein N-terminal domain CEW88_RS16925 PF16921 Tex protein YqgF-like domain CEW88_RS16930 PF00072 Response regulator receiver domain CEW88_RS16930 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS16935 PF07730 Histidine kinase CEW88_RS16935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS16940 PF13407 Periplasmic binding protein domain CEW88_RS16945 PF00005 ABC transporter CEW88_RS16950 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS16955 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS16960 PF08450 SMP-30/Gluconolactonase/LRE-like region CEW88_RS16965 PF01965 DJ-1/PfpI family CEW88_RS16970 PF03466 LysR substrate binding domain CEW88_RS16970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16975 PF13977 BetI-type transcriptional repressor, C-terminal CEW88_RS16975 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS16980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS16980 PF03466 LysR substrate binding domain CEW88_RS17000 PF00994 Probable molybdopterin binding domain CEW88_RS17000 PF02464 Competence-damaged protein CEW88_RS17000 PF18146 Damage-inducible protein CinA KH domain CEW88_RS17005 PF01156 Inosine-uridine preferring nucleoside hydrolase CEW88_RS17010 PF01261 Xylose isomerase-like TIM barrel CEW88_RS17010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS17015 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS17025 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS17030 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEW88_RS17030 PF08501 Shikimate dehydrogenase substrate binding domain CEW88_RS17045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS17055 PF07715 TonB-dependent Receptor Plug Domain CEW88_RS17055 PF00593 TonB dependent receptor CEW88_RS17060 PF00268 Ribonucleotide reductase, small chain CEW88_RS17065 PF08343 Ribonucleotide reductase N-terminal CEW88_RS17065 PF00317 Ribonucleotide reductase, all-alpha domain CEW88_RS17065 PF02867 Ribonucleotide reductase, barrel domain CEW88_RS17070 PF07972 NrdI Flavodoxin like CEW88_RS17080 PF00710 Asparaginase, N-terminal CEW88_RS17080 PF17763 Glutaminase/Asparaginase C-terminal domain CEW88_RS17085 PF00141 Peroxidase CEW88_RS17090 PF07729 FCD domain CEW88_RS17090 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS17095 PF01370 NAD dependent epimerase/dehydratase family CEW88_RS17100 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS17120 PF03738 Glutathionylspermidine synthase preATP-grasp CEW88_RS17125 PF06693 Protein of unknown function (DUF1190) CEW88_RS17140 PF04304 Protein of unknown function (DUF454) CEW88_RS17150 PF01266 FAD dependent oxidoreductase CEW88_RS17160 PF01226 Formate/nitrite transporter CEW88_RS17165 PF00141 Peroxidase CEW88_RS17170 PF13382 Adenine deaminase C-terminal domain CEW88_RS17170 PF01979 Amidohydrolase family CEW88_RS17175 PF01156 Inosine-uridine preferring nucleoside hydrolase CEW88_RS17180 PF00005 ABC transporter CEW88_RS17180 PF08402 TOBE domain CEW88_RS17185 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17190 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17200 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS17205 PF02405 Permease MlaE CEW88_RS17210 PF00005 ABC transporter CEW88_RS17230 PF00571 CBS domain CEW88_RS17230 PF00005 ABC transporter CEW88_RS17235 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CEW88_RS17245 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS17245 PF13977 BetI-type transcriptional repressor, C-terminal CEW88_RS17250 PF00171 Aldehyde dehydrogenase family CEW88_RS17255 PF00732 GMC oxidoreductase CEW88_RS17255 PF05199 GMC oxidoreductase CEW88_RS17265 PF09383 NIL domain CEW88_RS17265 PF00005 ABC transporter CEW88_RS17270 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17275 PF03180 NLPA lipoprotein CEW88_RS17285 PF01571 Aminomethyltransferase folate-binding domain CEW88_RS17285 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS17285 PF17806 Sarcosine oxidase A3 domain CEW88_RS17285 PF08669 Glycine cleavage T-protein C-terminal barrel domain CEW88_RS17295 PF01266 FAD dependent oxidoreductase CEW88_RS17310 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS17310 PF00501 AMP-binding enzyme CEW88_RS17310 PF16177 Acetyl-coenzyme A synthetase N-terminus CEW88_RS17315 PF01515 Phosphate acetyl/butaryl transferase CEW88_RS17315 PF03949 Malic enzyme, NAD binding domain CEW88_RS17315 PF00390 Malic enzyme, N-terminal domain CEW88_RS17325 PF01368 DHH family CEW88_RS17325 PF02833 DHHA2 domain CEW88_RS17330 PF01263 Aldose 1-epimerase CEW88_RS17340 PF01575 MaoC like domain CEW88_RS17345 PF03358 NADPH-dependent FMN reductase CEW88_RS17350 PF16925 Tetracyclin repressor-like, C-terminal domain CEW88_RS17350 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS17355 PF14765 Polyketide synthase dehydratase CEW88_RS17355 PF00550 Phosphopantetheine attachment site CEW88_RS17355 PF02801 Beta-ketoacyl synthase, C-terminal domain CEW88_RS17355 PF08659 KR domain CEW88_RS17355 PF08990 Erythronolide synthase docking CEW88_RS17355 PF00109 Beta-ketoacyl synthase, N-terminal domain CEW88_RS17355 PF09277 Erythronolide synthase, docking CEW88_RS17355 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS17355 PF00698 Acyl transferase domain CEW88_RS17355 PF16197 Ketoacyl-synthetase C-terminal extension CEW88_RS17360 PF01925 Sulfite exporter TauE/SafE CEW88_RS17365 PF00557 Metallopeptidase family M24 CEW88_RS17370 PF05552 Conserved TM helix CEW88_RS17370 PF00924 Mechanosensitive ion channel CEW88_RS17375 PF17746 SfsA N-terminal OB domain CEW88_RS17375 PF03749 Sugar fermentation stimulation protein RE domain CEW88_RS17380 PF00455 DeoR C terminal sensor domain CEW88_RS17380 PF08220 DeoR-like helix-turn-helix domain CEW88_RS17385 PF01266 FAD dependent oxidoreductase CEW88_RS17385 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEW88_RS17390 PF00005 ABC transporter CEW88_RS17390 PF17912 MalK OB fold domain CEW88_RS17395 PF00005 ABC transporter CEW88_RS17400 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17405 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17420 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW88_RS17420 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW88_RS17430 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS17445 PF08402 TOBE domain CEW88_RS17445 PF00005 ABC transporter CEW88_RS17450 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS17460 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS17470 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS17470 PF00072 Response regulator receiver domain CEW88_RS17475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS17475 PF08448 PAS fold CEW88_RS17475 PF13188 PAS domain CEW88_RS17475 PF00072 Response regulator receiver domain CEW88_RS17475 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS17490 PF01494 FAD binding domain CEW88_RS17525 PF13378 Enolase C-terminal domain-like CEW88_RS17525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEW88_RS17545 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CEW88_RS17545 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CEW88_RS17555 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS17565 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS17570 PF07995 Glucose / Sorbosone dehydrogenase CEW88_RS17580 PF02091 Glycyl-tRNA synthetase alpha subunit CEW88_RS17590 PF03900 Porphobilinogen deaminase, C-terminal domain CEW88_RS17590 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CEW88_RS17595 PF01208 Uroporphyrinogen decarboxylase (URO-D) CEW88_RS17600 PF00892 EamA-like transporter family CEW88_RS17605 PF00005 ABC transporter CEW88_RS17610 PF01061 ABC-2 type transporter CEW88_RS17630 PF13737 Transposase DDE domain CEW88_RS17650 PF11741 AMIN domain CEW88_RS17650 PF01520 N-acetylmuramoyl-L-alanine amidase CEW88_RS17655 PF00155 Aminotransferase class I and II CEW88_RS17670 PF00072 Response regulator receiver domain CEW88_RS17670 PF13188 PAS domain CEW88_RS17670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS17670 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS17670 PF08448 PAS fold CEW88_RS17675 PF04551 GcpE protein CEW88_RS17685 PF00155 Aminotransferase class I and II CEW88_RS17710 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS17715 PF01979 Amidohydrolase family CEW88_RS17720 PF00156 Phosphoribosyl transferase domain CEW88_RS17725 PF00772 DnaB-like helicase N terminal domain CEW88_RS17725 PF03796 DnaB-like helicase C terminal domain CEW88_RS17735 PF01168 Alanine racemase, N-terminal domain CEW88_RS17735 PF00842 Alanine racemase, C-terminal domain CEW88_RS17740 PF02405 Permease MlaE CEW88_RS17745 PF00005 ABC transporter CEW88_RS17765 PF06745 KaiC CEW88_RS17765 PF18073 Rubredoxin metal binding domain CEW88_RS17775 PF13537 Glutamine amidotransferase domain CEW88_RS17775 PF00156 Phosphoribosyl transferase domain CEW88_RS17785 PF00106 short chain dehydrogenase CEW88_RS17795 PF01975 Survival protein SurE CEW88_RS17815 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CEW88_RS17815 PF06481 COX Aromatic Rich Motif CEW88_RS17820 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW88_RS17825 PF00510 Cytochrome c oxidase subunit III CEW88_RS17830 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CEW88_RS17840 PF07690 Major Facilitator Superfamily CEW88_RS17845 PF14693 Ribosomal protein TL5, C-terminal domain CEW88_RS17845 PF01386 Ribosomal L25p family CEW88_RS17855 PF01195 Peptidyl-tRNA hydrolase CEW88_RS17870 PF00491 Arginase family CEW88_RS17875 PF03466 LysR substrate binding domain CEW88_RS17875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS17890 PF05525 Branched-chain amino acid transport protein CEW88_RS17895 PF13426 PAS domain CEW88_RS17895 PF07536 HWE histidine kinase CEW88_RS17900 PF00271 Helicase conserved C-terminal domain CEW88_RS17900 PF03461 TRCF domain CEW88_RS17900 PF17757 UvrB interaction domain CEW88_RS17900 PF02559 CarD-like/TRCF domain CEW88_RS17900 PF00270 DEAD/DEAH box helicase CEW88_RS17910 PF00490 Delta-aminolevulinic acid dehydratase CEW88_RS17920 PF06233 Usg-like family CEW88_RS17925 PF03989 DNA gyrase C-terminal domain, beta-propeller CEW88_RS17925 PF00521 DNA gyrase/topoisomerase IV, subunit A CEW88_RS17945 PF05114 Protein of unknown function (DUF692) CEW88_RS17955 PF04542 Sigma-70 region 2 CEW88_RS17955 PF04545 Sigma-70, region 4 CEW88_RS17975 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEW88_RS17975 PF00128 Alpha amylase, catalytic domain CEW88_RS17975 PF02806 Alpha amylase, C-terminal all-beta domain CEW88_RS17985 PF03193 RsgA GTPase CEW88_RS17990 PF00106 short chain dehydrogenase CEW88_RS17995 PF07171 MlrC C-terminus CEW88_RS17995 PF07364 Metallopeptidase family M81 CEW88_RS18000 PF00480 ROK family CEW88_RS18005 PF01979 Amidohydrolase family CEW88_RS18010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS18010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS18015 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18020 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18025 PF01547 Bacterial extracellular solute-binding protein CEW88_RS18030 PF00005 ABC transporter CEW88_RS18030 PF08402 TOBE domain CEW88_RS18035 PF14031 Putative serine dehydratase domain CEW88_RS18035 PF01168 Alanine racemase, N-terminal domain CEW88_RS18045 PF01380 SIS domain CEW88_RS18045 PF01418 Helix-turn-helix domain, rpiR family CEW88_RS18060 PF03932 CutC family CEW88_RS18065 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CEW88_RS18070 PF01042 Endoribonuclease L-PSP CEW88_RS18085 PF05199 GMC oxidoreductase CEW88_RS18085 PF00732 GMC oxidoreductase CEW88_RS18090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS18090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS18110 PF01272 Transcription elongation factor, GreA/GreB, C-term CEW88_RS18110 PF03449 Transcription elongation factor, N-terminal CEW88_RS18145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS18145 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS18145 PF12806 Acetyl-CoA dehydrogenase C-terminal like CEW88_RS18145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS18150 PF03481 Putative GTP-binding controlling metal-binding CEW88_RS18150 PF01300 Telomere recombination CEW88_RS18155 PF02622 Uncharacterized ACR, COG1678 CEW88_RS18175 PF00994 Probable molybdopterin binding domain CEW88_RS18185 PF03167 Uracil DNA glycosylase superfamily CEW88_RS18190 PF01475 Ferric uptake regulator family CEW88_RS18195 PF01297 Zinc-uptake complex component A periplasmic CEW88_RS18200 PF00005 ABC transporter CEW88_RS18205 PF00950 ABC 3 transport family CEW88_RS18210 PF00950 ABC 3 transport family CEW88_RS18215 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS18215 PF00107 Zinc-binding dehydrogenase CEW88_RS18220 PF00005 ABC transporter CEW88_RS18220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS18225 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS18225 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18230 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS18240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS18240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS18245 PF05853 beta-keto acid cleavage enzyme CEW88_RS18250 PF01965 DJ-1/PfpI family CEW88_RS18250 PF12833 Helix-turn-helix domain CEW88_RS18255 PF07859 alpha/beta hydrolase fold CEW88_RS18265 PF01384 Phosphate transporter family CEW88_RS18280 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS18280 PF07729 FCD domain CEW88_RS18285 PF13458 Periplasmic binding protein CEW88_RS18290 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS18300 PF00005 ABC transporter CEW88_RS18300 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS18305 PF00005 ABC transporter CEW88_RS18315 PF05853 beta-keto acid cleavage enzyme CEW88_RS18320 PF00106 short chain dehydrogenase CEW88_RS18325 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS18325 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS18330 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS18335 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18340 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18345 PF00005 ABC transporter CEW88_RS18355 PF08220 DeoR-like helix-turn-helix domain CEW88_RS18355 PF00455 DeoR C terminal sensor domain CEW88_RS18385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW88_RS18385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW88_RS18390 PF13407 Periplasmic binding protein domain CEW88_RS18395 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS18400 PF00005 ABC transporter CEW88_RS18405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS18405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS18415 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS18415 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CEW88_RS18420 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS18425 PF13416 Bacterial extracellular solute-binding protein CEW88_RS18430 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18435 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18440 PF04616 Glycosyl hydrolases family 43 CEW88_RS18440 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CEW88_RS18445 PF08402 TOBE domain CEW88_RS18445 PF00005 ABC transporter CEW88_RS18450 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS18450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS18500 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS18500 PF00107 Zinc-binding dehydrogenase CEW88_RS18505 PF01965 DJ-1/PfpI family CEW88_RS18505 PF12833 Helix-turn-helix domain CEW88_RS18520 PF00884 Sulfatase CEW88_RS18530 PF01425 Amidase CEW88_RS18535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS18540 PF00005 ABC transporter CEW88_RS18540 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS18545 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS18545 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18550 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS18560 PF00596 Class II Aldolase and Adducin N-terminal domain CEW88_RS18575 PF13411 MerR HTH family regulatory protein CEW88_RS18590 PF01548 Transposase CEW88_RS18590 PF02371 Transposase IS116/IS110/IS902 family CEW88_RS18600 PF07883 Cupin domain CEW88_RS18610 PF13737 Transposase DDE domain CEW88_RS18640 PF05426 Alginate lyase CEW88_RS18655 PF16824 C-terminal carbohydrate-binding module CEW88_RS18655 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX CEW88_RS18665 PF16822 SGNH hydrolase-like domain, acetyltransferase AlgX CEW88_RS18670 PF03062 MBOAT, membrane-bound O-acyltransferase family CEW88_RS18680 PF01050 Mannose-6-phosphate isomerase CEW88_RS18680 PF00483 Nucleotidyl transferase CEW88_RS18695 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEW88_RS18695 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEW88_RS18695 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEW88_RS18700 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS18700 PF00072 Response regulator receiver domain CEW88_RS18710 PF13737 Transposase DDE domain CEW88_RS18725 PF02659 Putative manganese efflux pump CEW88_RS18735 PF05717 IS66 Orf2 like protein CEW88_RS18755 PF03466 LysR substrate binding domain CEW88_RS18755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS18765 PF13737 Transposase DDE domain CEW88_RS18770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEW88_RS18770 PF13378 Enolase C-terminal domain-like CEW88_RS18785 PF13737 Transposase DDE domain CEW88_RS18800 PF07690 Major Facilitator Superfamily CEW88_RS18805 PF02082 Transcriptional regulator CEW88_RS18810 PF00884 Sulfatase CEW88_RS18815 PF01548 Transposase CEW88_RS18815 PF02371 Transposase IS116/IS110/IS902 family CEW88_RS18850 PF00005 ABC transporter CEW88_RS18850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS18855 PF00005 ABC transporter CEW88_RS18855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS18860 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS18860 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18865 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS18870 PF01266 FAD dependent oxidoreductase CEW88_RS18875 PF04324 BFD-like [2Fe-2S] binding domain CEW88_RS18875 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS18885 PF01266 FAD dependent oxidoreductase CEW88_RS18890 PF03466 LysR substrate binding domain CEW88_RS18890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS18895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS18900 PF12462 DNA helicase IV / RNA helicase N terminal CEW88_RS18900 PF13361 UvrD-like helicase C-terminal domain CEW88_RS18900 PF00580 UvrD/REP helicase N-terminal domain CEW88_RS18905 PF13737 Transposase DDE domain CEW88_RS18915 PF12320 Type 5 capsule protein repressor C-terminal domain CEW88_RS18915 PF00149 Calcineurin-like phosphoesterase CEW88_RS18925 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family CEW88_RS18950 PF01638 HxlR-like helix-turn-helix CEW88_RS18960 PF02371 Transposase IS116/IS110/IS902 family CEW88_RS18960 PF01548 Transposase CEW88_RS19000 PF01614 Bacterial transcriptional regulator CEW88_RS19000 PF09339 IclR helix-turn-helix domain CEW88_RS19010 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS19025 PF02515 CoA-transferase family III CEW88_RS19035 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW88_RS19070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS19070 PF03466 LysR substrate binding domain CEW88_RS19080 PF12833 Helix-turn-helix domain CEW88_RS19115 PF01614 Bacterial transcriptional regulator CEW88_RS19115 PF09339 IclR helix-turn-helix domain CEW88_RS19135 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS19135 PF07729 FCD domain CEW88_RS19140 PF00326 Prolyl oligopeptidase family CEW88_RS19145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS19165 PF00005 ABC transporter CEW88_RS19165 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS19170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS19170 PF00005 ABC transporter CEW88_RS19175 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS19175 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19180 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19185 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS19195 PF00005 ABC transporter CEW88_RS19200 PF00107 Zinc-binding dehydrogenase CEW88_RS19200 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS19215 PF01168 Alanine racemase, N-terminal domain CEW88_RS19215 PF14031 Putative serine dehydratase domain CEW88_RS19220 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEW88_RS19225 PF00171 Aldehyde dehydrogenase family CEW88_RS19240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS19240 PF00005 ABC transporter CEW88_RS19245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS19250 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19255 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS19255 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19260 PF01134 Glucose inhibited division protein A CEW88_RS19260 PF13932 GidA associated domain CEW88_RS19265 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEW88_RS19270 PF13291 ACT domain CEW88_RS19270 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS19285 PF00202 Aminotransferase class-III CEW88_RS19295 PF01266 FAD dependent oxidoreductase CEW88_RS19300 PF13419 Haloacid dehalogenase-like hydrolase CEW88_RS19305 PF07687 Peptidase dimerisation domain CEW88_RS19305 PF01546 Peptidase family M20/M25/M40 CEW88_RS19315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS19320 PF01037 Lrp/AsnC ligand binding domain CEW88_RS19325 PF01266 FAD dependent oxidoreductase CEW88_RS19330 PF00180 Isocitrate/isopropylmalate dehydrogenase CEW88_RS19335 PF00171 Aldehyde dehydrogenase family CEW88_RS19345 PF07729 FCD domain CEW88_RS19345 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS19350 PF00701 Dihydrodipicolinate synthetase family CEW88_RS19355 PF02913 FAD linked oxidases, C-terminal domain CEW88_RS19355 PF01565 FAD binding domain CEW88_RS19360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS19360 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS19365 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS19365 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS19370 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS19375 PF00248 Aldo/keto reductase family CEW88_RS19380 PF05025 RbsD / FucU transport protein family CEW88_RS19395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW88_RS19395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW88_RS19400 PF00248 Aldo/keto reductase family CEW88_RS19405 PF02734 DAK2 domain CEW88_RS19410 PF02733 Dak1 domain CEW88_RS19415 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS19420 PF00005 ABC transporter CEW88_RS19425 PF13407 Periplasmic binding protein domain CEW88_RS19430 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS19435 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS19440 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS19455 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS19465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS19465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS19470 PF13737 Transposase DDE domain CEW88_RS19480 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS19480 PF07729 FCD domain CEW88_RS19490 PF00529 HlyD membrane-fusion protein of T1SS CEW88_RS19490 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS19495 PF00873 AcrB/AcrD/AcrF family CEW88_RS19500 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS19500 PF00072 Response regulator receiver domain CEW88_RS19505 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS19505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS19505 PF00672 HAMP domain CEW88_RS19510 PF00005 ABC transporter CEW88_RS19510 PF00664 ABC transporter transmembrane region CEW88_RS19520 PF00890 FAD binding domain CEW88_RS19520 PF14537 Cytochrome c3 CEW88_RS19525 PF07729 FCD domain CEW88_RS19525 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS19535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS19535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS19545 PF04303 PrpF protein CEW88_RS19560 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS19560 PF00072 Response regulator receiver domain CEW88_RS19565 PF00672 HAMP domain CEW88_RS19565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS19565 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS19585 PF03466 LysR substrate binding domain CEW88_RS19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS19590 PF13817 IS66 C-terminal element CEW88_RS19590 PF13007 Transposase C of IS166 homeodomain CEW88_RS19590 PF03050 Transposase IS66 family CEW88_RS19590 PF13005 zinc-finger binding domain of transposase IS66 CEW88_RS19615 PF01654 Cytochrome bd terminal oxidase subunit I CEW88_RS19620 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS19620 PF00155 Aminotransferase class I and II CEW88_RS19625 PF00155 Aminotransferase class I and II CEW88_RS19630 PF00155 Aminotransferase class I and II CEW88_RS19640 PF00155 Aminotransferase class I and II CEW88_RS19640 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS19650 PF00795 Carbon-nitrogen hydrolase CEW88_RS19665 PF00586 AIR synthase related protein, N-terminal domain CEW88_RS19665 PF02769 AIR synthase related protein, C-terminal domain CEW88_RS19690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS19690 PF03466 LysR substrate binding domain CEW88_RS19695 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CEW88_RS19700 PF01738 Dienelactone hydrolase family CEW88_RS19705 PF14542 GCN5-related N-acetyl-transferase CEW88_RS19710 PF02678 Pirin CEW88_RS19710 PF05726 Pirin C-terminal cupin domain CEW88_RS19715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS19715 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS19715 PF00672 HAMP domain CEW88_RS19730 PF07690 Major Facilitator Superfamily CEW88_RS19750 PF00535 Glycosyl transferase family 2 CEW88_RS19750 PF07238 PilZ domain CEW88_RS19750 PF03552 Cellulose synthase CEW88_RS19760 PF01270 Glycosyl hydrolases family 8 CEW88_RS19785 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW88_RS19785 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS19790 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CEW88_RS19805 PF00119 ATP synthase A chain CEW88_RS19810 PF00137 ATP synthase subunit C CEW88_RS19815 PF00430 ATP synthase B/B' CF(0) CEW88_RS19820 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW88_RS19820 PF00306 ATP synthase alpha/beta chain, C terminal domain CEW88_RS19820 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS19845 PF02469 Fasciclin domain CEW88_RS19855 PF04542 Sigma-70 region 2 CEW88_RS19855 PF04545 Sigma-70, region 4 CEW88_RS19865 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS19865 PF00107 Zinc-binding dehydrogenase CEW88_RS19870 PF01244 Membrane dipeptidase (Peptidase family M19) CEW88_RS19875 PF01112 Asparaginase CEW88_RS19890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS19905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS19905 PF00005 ABC transporter CEW88_RS19910 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19910 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS19915 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19920 PF00072 Response regulator receiver domain CEW88_RS19920 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS19940 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS19940 PF00072 Response regulator receiver domain CEW88_RS19945 PF02397 Bacterial sugar transferase CEW88_RS19960 PF00535 Glycosyl transferase family 2 CEW88_RS19965 PF00535 Glycosyl transferase family 2 CEW88_RS19970 PF00534 Glycosyl transferases group 1 CEW88_RS19970 PF13439 Glycosyltransferase Family 4 CEW88_RS19980 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS19985 PF00005 ABC transporter CEW88_RS20010 PF01292 Prokaryotic cytochrome b561 CEW88_RS20015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS20015 PF03466 LysR substrate binding domain CEW88_RS20020 PF01799 [2Fe-2S] binding domain CEW88_RS20020 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS20025 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS20025 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW88_RS20040 PF01979 Amidohydrolase family CEW88_RS20045 PF05899 Protein of unknown function (DUF861) CEW88_RS20045 PF07883 Cupin domain CEW88_RS20050 PF01614 Bacterial transcriptional regulator CEW88_RS20050 PF09339 IclR helix-turn-helix domain CEW88_RS20055 PF00266 Aminotransferase class-V CEW88_RS20060 PF00291 Pyridoxal-phosphate dependent enzyme CEW88_RS20065 PF14031 Putative serine dehydratase domain CEW88_RS20065 PF01168 Alanine racemase, N-terminal domain CEW88_RS20070 PF02423 Ornithine cyclodeaminase/mu-crystallin family CEW88_RS20075 PF00860 Permease family CEW88_RS20080 PF04115 Ureidoglycolate lyase CEW88_RS20090 PF03466 LysR substrate binding domain CEW88_RS20090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS20100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS20100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS20110 PF01112 Asparaginase CEW88_RS20115 PF01522 Polysaccharide deacetylase CEW88_RS20140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS20145 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20150 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20150 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS20155 PF00005 ABC transporter CEW88_RS20155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS20160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS20160 PF00005 ABC transporter CEW88_RS20165 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CEW88_RS20170 PF00155 Aminotransferase class I and II CEW88_RS20175 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS20175 PF13977 BetI-type transcriptional repressor, C-terminal CEW88_RS20180 PF00005 ABC transporter CEW88_RS20185 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS20190 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20195 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS20205 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS20205 PF00107 Zinc-binding dehydrogenase CEW88_RS20210 PF00596 Class II Aldolase and Adducin N-terminal domain CEW88_RS20215 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS20215 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS20220 PF05853 beta-keto acid cleavage enzyme CEW88_RS20225 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS20235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS20235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS20235 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS20250 PF00596 Class II Aldolase and Adducin N-terminal domain CEW88_RS20255 PF13407 Periplasmic binding protein domain CEW88_RS20260 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS20265 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS20270 PF00005 ABC transporter CEW88_RS20275 PF04198 Putative sugar-binding domain CEW88_RS20280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CEW88_RS20280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CEW88_RS20290 PF00005 ABC transporter CEW88_RS20295 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20300 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS20305 PF03466 LysR substrate binding domain CEW88_RS20305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS20310 PF07690 Major Facilitator Superfamily CEW88_RS20315 PF07729 FCD domain CEW88_RS20315 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS20330 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS20345 PF00107 Zinc-binding dehydrogenase CEW88_RS20345 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS20350 PF01546 Peptidase family M20/M25/M40 CEW88_RS20365 PF01638 HxlR-like helix-turn-helix CEW88_RS20370 PF01979 Amidohydrolase family CEW88_RS20375 PF07702 UTRA domain CEW88_RS20375 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS20390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEW88_RS20405 PF01638 HxlR-like helix-turn-helix CEW88_RS20410 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS20415 PF01209 ubiE/COQ5 methyltransferase family CEW88_RS20425 PF00005 ABC transporter CEW88_RS20435 PF00296 Luciferase-like monooxygenase CEW88_RS20440 PF00860 Permease family CEW88_RS20445 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CEW88_RS20455 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS20455 PF08362 YcdC-like protein, C-terminal region CEW88_RS20460 PF02525 Flavodoxin-like fold CEW88_RS20465 PF09084 NMT1/THI5 like CEW88_RS20480 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20485 PF00005 ABC transporter CEW88_RS20490 PF02633 Creatinine amidohydrolase CEW88_RS20500 PF00593 TonB dependent receptor CEW88_RS20500 PF07715 TonB-dependent Receptor Plug Domain CEW88_RS20505 PF00664 ABC transporter transmembrane region CEW88_RS20505 PF00005 ABC transporter CEW88_RS20520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEW88_RS20520 PF02154 Flagellar motor switch protein FliM CEW88_RS20530 PF01514 Secretory protein of YscJ/FliF family CEW88_RS20530 PF08345 Flagellar M-ring protein C-terminal CEW88_RS20540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CEW88_RS20545 PF00813 FliP family CEW88_RS20550 PF01706 FliG C-terminal domain CEW88_RS20550 PF14842 FliG N-terminal domain CEW88_RS20550 PF14841 FliG middle domain CEW88_RS20560 PF07378 Flagellar protein FlbT CEW88_RS20570 PF00669 Bacterial flagellin N-terminal helical region CEW88_RS20570 PF00700 Bacterial flagellin C-terminal helical region CEW88_RS20585 PF02119 Flagellar P-ring protein CEW88_RS20590 PF00072 Response regulator receiver domain CEW88_RS20590 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS20605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS20605 PF00460 Flagella basal body rod protein CEW88_RS20605 PF07559 Flagellar basal body protein FlaE CEW88_RS20615 PF00460 Flagella basal body rod protein CEW88_RS20615 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS20620 PF00460 Flagella basal body rod protein CEW88_RS20620 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS20630 PF02107 Flagellar L-ring protein CEW88_RS20650 PF04542 Sigma-70 region 2 CEW88_RS20650 PF00140 Sigma-70 factor, region 1.2 CEW88_RS20650 PF04539 Sigma-70 region 3 CEW88_RS20650 PF04545 Sigma-70, region 4 CEW88_RS20660 PF13677 Membrane MotB of proton-channel complex MotA/MotB CEW88_RS20660 PF00691 OmpA family CEW88_RS20670 PF05443 ROS/MUCR transcriptional regulator protein CEW88_RS20675 PF00072 Response regulator receiver domain CEW88_RS20675 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS20685 PF01618 MotA/TolQ/ExbB proton channel family CEW88_RS20710 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CEW88_RS20710 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CEW88_RS20710 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CEW88_RS20715 PF00005 ABC transporter CEW88_RS20715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS20720 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20720 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS20725 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS20730 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS20735 PF03466 LysR substrate binding domain CEW88_RS20735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS20740 PF01370 NAD dependent epimerase/dehydratase family CEW88_RS20740 PF02911 Formyl transferase, C-terminal domain CEW88_RS20740 PF00551 Formyl transferase CEW88_RS20750 PF01232 Mannitol dehydrogenase Rossmann domain CEW88_RS20750 PF08125 Mannitol dehydrogenase C-terminal domain CEW88_RS20755 PF03786 D-mannonate dehydratase (UxuA) CEW88_RS20760 PF07729 FCD domain CEW88_RS20760 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS20765 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS20775 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS20780 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS20780 PF00107 Zinc-binding dehydrogenase CEW88_RS20790 PF00206 Lyase CEW88_RS20790 PF10397 Adenylosuccinate lyase C-terminus CEW88_RS20795 PF00775 Dioxygenase CEW88_RS20800 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal CEW88_RS20800 PF00775 Dioxygenase CEW88_RS20810 PF00561 alpha/beta hydrolase fold CEW88_RS20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS20815 PF03466 LysR substrate binding domain CEW88_RS20820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS20820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS20830 PF00583 Acetyltransferase (GNAT) family CEW88_RS20835 PF00202 Aminotransferase class-III CEW88_RS20840 PF06339 Ectoine synthase CEW88_RS20845 PF00696 Amino acid kinase family CEW88_RS20845 PF13840 ACT domain CEW88_RS20850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CEW88_RS20855 PF16653 Saccharopine dehydrogenase C-terminal domain CEW88_RS20855 PF03435 Saccharopine dehydrogenase NADP binding domain CEW88_RS20860 PF01050 Mannose-6-phosphate isomerase CEW88_RS20860 PF00483 Nucleotidyl transferase CEW88_RS20865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CEW88_RS20865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CEW88_RS20865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CEW88_RS20865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CEW88_RS20870 PF02397 Bacterial sugar transferase CEW88_RS20875 PF00149 Calcineurin-like phosphoesterase CEW88_RS20880 PF01841 Transglutaminase-like superfamily CEW88_RS20885 PF00999 Sodium/hydrogen exchanger family CEW88_RS20895 PF13614 AAA domain CEW88_RS20895 PF00376 MerR family regulatory protein CEW88_RS20910 PF02397 Bacterial sugar transferase CEW88_RS20915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CEW88_RS20915 PF02874 ATP synthase alpha/beta family, beta-barrel domain CEW88_RS20915 PF18269 T3SS EscN ATPase C-terminal domain CEW88_RS20920 PF00460 Flagella basal body rod protein CEW88_RS20925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CEW88_RS20925 PF00460 Flagella basal body rod protein CEW88_RS20930 PF02049 Flagellar hook-basal body complex protein FliE CEW88_RS20935 PF01313 Bacterial export proteins, family 3 CEW88_RS20945 PF00771 FHIPEP family CEW88_RS20950 PF01311 Bacterial export proteins, family 1 CEW88_RS20955 PF01312 FlhB HrpN YscU SpaS Family CEW88_RS20960 PF03971 Monomeric isocitrate dehydrogenase CEW88_RS20975 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS20985 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CEW88_RS20985 PF00753 Metallo-beta-lactamase superfamily CEW88_RS20985 PF10996 Beta-Casp domain CEW88_RS20990 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21000 PF00005 ABC transporter CEW88_RS21000 PF17912 MalK OB fold domain CEW88_RS21005 PF00576 HIUase/Transthyretin family CEW88_RS21010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEW88_RS21010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CEW88_RS21020 PF01494 FAD binding domain CEW88_RS21025 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21030 PF00005 ABC transporter CEW88_RS21035 PF12849 PBP superfamily domain CEW88_RS21050 PF02954 Bacterial regulatory protein, Fis family CEW88_RS21050 PF00072 Response regulator receiver domain CEW88_RS21050 PF00158 Sigma-54 interaction domain CEW88_RS21055 PF00034 Cytochrome c CEW88_RS21060 PF01292 Prokaryotic cytochrome b561 CEW88_RS21065 PF13247 4Fe-4S dicluster domain CEW88_RS21070 PF01568 Molydopterin dinucleotide binding domain CEW88_RS21070 PF00384 Molybdopterin oxidoreductase CEW88_RS21070 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW88_RS21105 PF10609 NUBPL iron-transfer P-loop NTPase CEW88_RS21120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS21120 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS21120 PF00989 PAS fold CEW88_RS21125 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW88_RS21125 PF01568 Molydopterin dinucleotide binding domain CEW88_RS21125 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEW88_RS21125 PF00384 Molybdopterin oxidoreductase CEW88_RS21125 PF12838 4Fe-4S dicluster domain CEW88_RS21130 PF10531 SLBB domain CEW88_RS21130 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CEW88_RS21130 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CEW88_RS21135 PF01206 Sulfurtransferase TusA CEW88_RS21140 PF03453 MoeA N-terminal region (domain I and II) CEW88_RS21140 PF03454 MoeA C-terminal region (domain IV) CEW88_RS21140 PF00994 Probable molybdopterin binding domain CEW88_RS21145 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CEW88_RS21150 PF12804 MobA-like NTP transferase domain CEW88_RS21155 PF02634 FdhD/NarQ family CEW88_RS21180 PF00171 Aldehyde dehydrogenase family CEW88_RS21185 PF02028 BCCT, betaine/carnitine/choline family transporter CEW88_RS21190 PF05853 beta-keto acid cleavage enzyme CEW88_RS21195 PF13091 PLD-like domain CEW88_RS21205 PF01011 PQQ enzyme repeat CEW88_RS21215 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS21215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS21215 PF00672 HAMP domain CEW88_RS21220 PF00072 Response regulator receiver domain CEW88_RS21220 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS21225 PF01547 Bacterial extracellular solute-binding protein CEW88_RS21230 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21235 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21240 PF00005 ABC transporter CEW88_RS21240 PF17912 MalK OB fold domain CEW88_RS21255 PF00171 Aldehyde dehydrogenase family CEW88_RS21260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS21260 PF03466 LysR substrate binding domain CEW88_RS21265 PF03023 Lipid II flippase MurJ CEW88_RS21270 PF00005 ABC transporter CEW88_RS21270 PF12857 TOBE-like domain CEW88_RS21275 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21280 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21290 PF02082 Transcriptional regulator CEW88_RS21295 PF01037 Lrp/AsnC ligand binding domain CEW88_RS21295 PF13404 AsnC-type helix-turn-helix domain CEW88_RS21315 PF00873 AcrB/AcrD/AcrF family CEW88_RS21325 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS21325 PF17932 Tetracyclin repressor-like, C-terminal domain CEW88_RS21330 PF02634 FdhD/NarQ family CEW88_RS21335 PF00384 Molybdopterin oxidoreductase CEW88_RS21340 PF01654 Cytochrome bd terminal oxidase subunit I CEW88_RS21345 PF02322 Cytochrome bd terminal oxidase subunit II CEW88_RS21355 PF03358 NADPH-dependent FMN reductase CEW88_RS21360 PF00034 Cytochrome c CEW88_RS21360 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CEW88_RS21360 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CEW88_RS21365 PF00115 Cytochrome C and Quinol oxidase polypeptide I CEW88_RS21380 PF00034 Cytochrome c CEW88_RS21395 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS21400 PF01799 [2Fe-2S] binding domain CEW88_RS21400 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS21405 PF01053 Cys/Met metabolism PLP-dependent enzyme CEW88_RS21415 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS21425 PF03401 Tripartite tricarboxylate transporter family receptor CEW88_RS21430 PF03737 Aldolase/RraA CEW88_RS21435 PF01842 ACT domain CEW88_RS21435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CEW88_RS21435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CEW88_RS21440 PF03466 LysR substrate binding domain CEW88_RS21440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS21445 PF08125 Mannitol dehydrogenase C-terminal domain CEW88_RS21445 PF01232 Mannitol dehydrogenase Rossmann domain CEW88_RS21450 PF00248 Aldo/keto reductase family CEW88_RS21465 PF07992 Pyridine nucleotide-disulphide oxidoreductase CEW88_RS21465 PF14759 Reductase C-terminal CEW88_RS21470 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS21475 PF00067 Cytochrome P450 CEW88_RS21480 PF03466 LysR substrate binding domain CEW88_RS21480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS21490 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS21495 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS21510 PF00920 Dehydratase family CEW88_RS21515 PF00701 Dihydrodipicolinate synthetase family CEW88_RS21520 PF03737 Aldolase/RraA CEW88_RS21525 PF01037 Lrp/AsnC ligand binding domain CEW88_RS21530 PF00456 Transketolase, thiamine diphosphate binding domain CEW88_RS21530 PF17831 Pyruvate dehydrogenase E1 component middle domain CEW88_RS21535 PF02654 Cobalamin-5-phosphate synthase CEW88_RS21540 PF02277 Phosphoribosyltransferase CEW88_RS21545 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CEW88_RS21560 PF03186 CobD/Cbib protein CEW88_RS21565 PF00155 Aminotransferase class I and II CEW88_RS21570 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP CEW88_RS21580 PF07683 Cobalamin synthesis protein cobW C-terminal domain CEW88_RS21580 PF02492 CobW/HypB/UreG, nucleotide-binding domain CEW88_RS21585 PF02514 CobN/Magnesium Chelatase CEW88_RS21590 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CEW88_RS21595 PF02570 Precorrin-8X methylmutase CEW88_RS21600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS21605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS21610 PF02571 Precorrin-6x reductase CbiJ/CobK CEW88_RS21615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS21625 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS21630 PF07685 CobB/CobQ-like glutamine amidotransferase domain CEW88_RS21630 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW88_RS21640 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CEW88_RS21660 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS21660 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS21670 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS21685 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS21685 PF00501 AMP-binding enzyme CEW88_RS21695 PF00171 Aldehyde dehydrogenase family CEW88_RS21700 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS21705 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21710 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS21715 PF00005 ABC transporter CEW88_RS21720 PF02615 Malate/L-lactate dehydrogenase CEW88_RS21735 PF00701 Dihydrodipicolinate synthetase family CEW88_RS21740 PF05544 Proline racemase CEW88_RS21745 PF01266 FAD dependent oxidoreductase CEW88_RS21750 PF05544 Proline racemase CEW88_RS21790 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CEW88_RS21790 PF13360 PQQ-like domain CEW88_RS21815 PF00005 ABC transporter CEW88_RS21865 PF13360 PQQ-like domain CEW88_RS21870 PF00034 Cytochrome c CEW88_RS21875 PF00756 Putative esterase CEW88_RS21880 PF00107 Zinc-binding dehydrogenase CEW88_RS21880 PF08240 Alcohol dehydrogenase GroES-like domain CEW88_RS21900 PF08808 RES domain CEW88_RS21920 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS21920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS21930 PF00072 Response regulator receiver domain CEW88_RS21930 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS21935 PF04828 Glutathione-dependent formaldehyde-activating enzyme CEW88_RS21945 PF03428 Replication protein C N-terminal domain CEW88_RS21945 PF11800 Replication protein C C-terminal region CEW88_RS21950 PF02195 ParB-like nuclease domain CEW88_RS21950 PF07506 RepB plasmid partitioning protein CEW88_RS21955 PF13614 AAA domain CEW88_RS21960 PF13186 Iron-sulfur cluster-binding domain CEW88_RS21960 PF04055 Radical SAM superfamily CEW88_RS21965 PF05402 Coenzyme PQQ synthesis protein D (PqqD) CEW88_RS21970 PF03070 TENA/THI-4/PQQC family CEW88_RS21975 PF12706 Beta-lactamase superfamily domain CEW88_RS21980 PF08042 PqqA family CEW88_RS21985 PF00486 Transcriptional regulatory protein, C terminal CEW88_RS21985 PF00072 Response regulator receiver domain CEW88_RS21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS21990 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS21990 PF08448 PAS fold CEW88_RS21990 PF13426 PAS domain CEW88_RS21990 PF00072 Response regulator receiver domain CEW88_RS22005 PF00005 ABC transporter CEW88_RS22015 PF03466 LysR substrate binding domain CEW88_RS22015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS22025 PF00873 AcrB/AcrD/AcrF family CEW88_RS22030 PF13533 Biotin-lipoyl like CEW88_RS22050 PF01556 DnaJ C terminal domain CEW88_RS22050 PF00684 DnaJ central domain CEW88_RS22050 PF00226 DnaJ domain CEW88_RS22055 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS22060 PF00005 ABC transporter CEW88_RS22065 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22070 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22075 PF01546 Peptidase family M20/M25/M40 CEW88_RS22095 PF03401 Tripartite tricarboxylate transporter family receptor CEW88_RS22105 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS22110 PF07687 Peptidase dimerisation domain CEW88_RS22110 PF01546 Peptidase family M20/M25/M40 CEW88_RS22115 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CEW88_RS22120 PF00195 Chalcone and stilbene synthases, N-terminal domain CEW88_RS22120 PF02797 Chalcone and stilbene synthases, C-terminal domain CEW88_RS22125 PF13454 FAD-NAD(P)-binding CEW88_RS22130 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS22140 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22145 PF00005 ABC transporter CEW88_RS22165 PF04209 homogentisate 1,2-dioxygenase CEW88_RS22180 PF01494 FAD binding domain CEW88_RS22190 PF02798 Glutathione S-transferase, N-terminal domain CEW88_RS22190 PF14497 Glutathione S-transferase, C-terminal domain CEW88_RS22200 PF00403 Heavy-metal-associated domain CEW88_RS22220 PF01613 Flavin reductase like domain CEW88_RS22230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CEW88_RS22245 PF01042 Endoribonuclease L-PSP CEW88_RS22265 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW88_RS22275 PF04199 Putative cyclase CEW88_RS22285 PF01047 MarR family CEW88_RS22305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS22310 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22315 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS22315 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22320 PF00005 ABC transporter CEW88_RS22320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS22325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS22325 PF00005 ABC transporter CEW88_RS22330 PF00501 AMP-binding enzyme CEW88_RS22330 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS22340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS22345 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS22360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CEW88_RS22360 PF00384 Molybdopterin oxidoreductase CEW88_RS22360 PF01568 Molydopterin dinucleotide binding domain CEW88_RS22365 PF12800 4Fe-4S binding domain CEW88_RS22365 PF12838 4Fe-4S dicluster domain CEW88_RS22370 PF13237 4Fe-4S dicluster domain CEW88_RS22370 PF12801 4Fe-4S binding domain CEW88_RS22375 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) CEW88_RS22380 PF03264 NapC/NirT cytochrome c family, N-terminal region CEW88_RS22405 PF12464 Maltose acetyltransferase CEW88_RS22405 PF14602 Hexapeptide repeat of succinyl-transferase CEW88_RS22405 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS22415 PF02397 Bacterial sugar transferase CEW88_RS22455 PF13614 AAA domain CEW88_RS22490 PF09924 Uncharacterised conserved protein (DUF2156) CEW88_RS22490 PF03706 Lysylphosphatidylglycerol synthase TM region CEW88_RS22500 PF01569 PAP2 superfamily CEW88_RS22510 PF07690 Major Facilitator Superfamily CEW88_RS22515 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22520 PF00005 ABC transporter CEW88_RS22525 PF03070 TENA/THI-4/PQQC family CEW88_RS22530 PF09084 NMT1/THI5 like CEW88_RS22535 PF00899 ThiF family CEW88_RS22540 PF02581 Thiamine monophosphate synthase CEW88_RS22545 PF05690 Thiazole biosynthesis protein ThiG CEW88_RS22555 PF01266 FAD dependent oxidoreductase CEW88_RS22560 PF08543 Phosphomethylpyrimidine kinase CEW88_RS22565 PF01037 Lrp/AsnC ligand binding domain CEW88_RS22570 PF03301 Tryptophan 2,3-dioxygenase CEW88_RS22575 PF00005 ABC transporter CEW88_RS22580 PF07729 FCD domain CEW88_RS22580 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS22585 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS22590 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22595 PF00266 Aminotransferase class-V CEW88_RS22600 PF01266 FAD dependent oxidoreductase CEW88_RS22605 PF00005 ABC transporter CEW88_RS22610 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22615 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS22625 PF01381 Helix-turn-helix CEW88_RS22625 PF08671 Anti-repressor SinI CEW88_RS22635 PF13936 Helix-turn-helix domain CEW88_RS22635 PF00665 Integrase core domain CEW88_RS22645 PF01613 Flavin reductase like domain CEW88_RS22650 PF07729 FCD domain CEW88_RS22650 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS22655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS22660 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22665 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22665 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS22670 PF07969 Amidohydrolase family CEW88_RS22675 PF01979 Amidohydrolase family CEW88_RS22680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS22680 PF00005 ABC transporter CEW88_RS22685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS22685 PF00005 ABC transporter CEW88_RS22690 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CEW88_RS22705 PF07519 Tannase and feruloyl esterase CEW88_RS22715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEW88_RS22715 PF08501 Shikimate dehydrogenase substrate binding domain CEW88_RS22715 PF03435 Saccharopine dehydrogenase NADP binding domain CEW88_RS22720 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS22735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS22735 PF03466 LysR substrate binding domain CEW88_RS22740 PF00890 FAD binding domain CEW88_RS22750 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CEW88_RS22750 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CEW88_RS22755 PF02910 Fumarate reductase flavoprotein C-term CEW88_RS22755 PF00890 FAD binding domain CEW88_RS22760 PF02445 Quinolinate synthetase A protein CEW88_RS22770 PF00815 Histidinol dehydrogenase CEW88_RS22775 PF03328 HpcH/HpaI aldolase/citrate lyase family CEW88_RS22790 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS22795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS22795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS22795 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS22800 PF00005 ABC transporter CEW88_RS22805 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS22805 PF00005 ABC transporter CEW88_RS22810 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS22810 PF11862 Domain of unknown function (DUF3382) CEW88_RS22815 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS22830 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS22835 PF03061 Thioesterase superfamily CEW88_RS22840 PF14535 AMP-binding enzyme C-terminal domain CEW88_RS22840 PF00501 AMP-binding enzyme CEW88_RS22845 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS22845 PF08362 YcdC-like protein, C-terminal region CEW88_RS22850 PF00132 Bacterial transferase hexapeptide (six repeats) CEW88_RS22855 PF00171 Aldehyde dehydrogenase family CEW88_RS22855 PF01575 MaoC like domain CEW88_RS22865 PF00970 Oxidoreductase FAD-binding domain CEW88_RS22865 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS22865 PF00175 Oxidoreductase NAD-binding domain CEW88_RS22870 PF01883 Iron-sulfur cluster assembly protein CEW88_RS22875 PF05138 Phenylacetic acid catabolic protein CEW88_RS22880 PF06243 Phenylacetic acid degradation B CEW88_RS22885 PF05138 Phenylacetic acid catabolic protein CEW88_RS22890 PF00108 Thiolase, N-terminal domain CEW88_RS22890 PF02803 Thiolase, C-terminal domain CEW88_RS22895 PF07848 PaaX-like protein CEW88_RS22895 PF08223 PaaX-like protein C-terminal domain CEW88_RS22905 PF01037 Lrp/AsnC ligand binding domain CEW88_RS22905 PF13404 AsnC-type helix-turn-helix domain CEW88_RS22915 PF08212 Lipocalin-like domain CEW88_RS22920 PF02080 TrkA-C domain CEW88_RS22920 PF02254 TrkA-N domain CEW88_RS22925 PF02386 Cation transport protein CEW88_RS22930 PF00005 ABC transporter CEW88_RS22930 PF17912 MalK OB fold domain CEW88_RS22930 PF03459 TOBE domain CEW88_RS22935 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22940 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS22945 PF13416 Bacterial extracellular solute-binding protein CEW88_RS22950 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CEW88_RS22960 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS22965 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS22970 PF00005 ABC transporter CEW88_RS23005 PF03466 LysR substrate binding domain CEW88_RS23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS23010 PF02733 Dak1 domain CEW88_RS23010 PF02734 DAK2 domain CEW88_RS23015 PF08402 TOBE domain CEW88_RS23015 PF00005 ABC transporter CEW88_RS23020 PF17912 MalK OB fold domain CEW88_RS23020 PF00005 ABC transporter CEW88_RS23030 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23035 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23045 PF00356 Bacterial regulatory proteins, lacI family CEW88_RS23050 PF00043 Glutathione S-transferase, C-terminal domain CEW88_RS23050 PF02798 Glutathione S-transferase, N-terminal domain CEW88_RS23055 PF02515 CoA-transferase family III CEW88_RS23060 PF00682 HMGL-like CEW88_RS23065 PF07729 FCD domain CEW88_RS23065 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS23080 PF01970 Tripartite tricarboxylate transporter TctA family CEW88_RS23090 PF00248 Aldo/keto reductase family CEW88_RS23100 PF07729 FCD domain CEW88_RS23100 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS23105 PF00005 ABC transporter CEW88_RS23105 PF12399 Branched-chain amino acid ATP-binding cassette transporter CEW88_RS23110 PF00005 ABC transporter CEW88_RS23115 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS23120 PF11862 Domain of unknown function (DUF3382) CEW88_RS23120 PF02653 Branched-chain amino acid transport system / permease component CEW88_RS23140 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CEW88_RS23145 PF00501 AMP-binding enzyme CEW88_RS23145 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS23150 PF13411 MerR HTH family regulatory protein CEW88_RS23155 PF02803 Thiolase, C-terminal domain CEW88_RS23155 PF00108 Thiolase, N-terminal domain CEW88_RS23160 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS23160 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CEW88_RS23160 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CEW88_RS23165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CEW88_RS23165 PF12806 Acetyl-CoA dehydrogenase C-terminal like CEW88_RS23165 PF02770 Acyl-CoA dehydrogenase, middle domain CEW88_RS23165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CEW88_RS23180 PF01979 Amidohydrolase family CEW88_RS23180 PF00449 Urease alpha-subunit, N-terminal domain CEW88_RS23185 PF00266 Aminotransferase class-V CEW88_RS23190 PF00005 ABC transporter CEW88_RS23195 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23200 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS23205 PF07729 FCD domain CEW88_RS23205 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS23220 PF01022 Bacterial regulatory protein, arsR family CEW88_RS23225 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CEW88_RS23225 PF01266 FAD dependent oxidoreductase CEW88_RS23230 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23235 PF00005 ABC transporter CEW88_RS23245 PF07729 FCD domain CEW88_RS23245 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS23250 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CEW88_RS23250 PF08501 Shikimate dehydrogenase substrate binding domain CEW88_RS23250 PF01488 Shikimate / quinate 5-dehydrogenase CEW88_RS23255 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS23275 PF00378 Enoyl-CoA hydratase/isomerase CEW88_RS23280 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS23280 PF00501 AMP-binding enzyme CEW88_RS23305 PF01740 STAS domain CEW88_RS23310 PF01740 STAS domain CEW88_RS23310 PF08678 Rsbr N terminal CEW88_RS23315 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CEW88_RS23315 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CEW88_RS23320 PF00941 FAD binding domain in molybdopterin dehydrogenase CEW88_RS23320 PF03450 CO dehydrogenase flavoprotein C-terminal domain CEW88_RS23325 PF00111 2Fe-2S iron-sulfur cluster binding domain CEW88_RS23325 PF01799 [2Fe-2S] binding domain CEW88_RS23325 PF10518 TAT (twin-arginine translocation) pathway signal sequence CEW88_RS23330 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CEW88_RS23330 PF00128 Alpha amylase, catalytic domain CEW88_RS23335 PF00483 Nucleotidyl transferase CEW88_RS23340 PF11800 Replication protein C C-terminal region CEW88_RS23340 PF03428 Replication protein C N-terminal domain CEW88_RS23355 PF01434 Peptidase family M41 CEW88_RS23355 PF00004 ATPase family associated with various cellular activities (AAA) CEW88_RS23355 PF17862 AAA+ lid domain CEW88_RS23375 PF03167 Uracil DNA glycosylase superfamily CEW88_RS23405 PF01557 Fumarylacetoacetate (FAA) hydrolase family CEW88_RS23415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS23420 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CEW88_RS23435 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS23440 PF00939 Sodium:sulfate symporter transmembrane region CEW88_RS23445 PF13378 Enolase C-terminal domain-like CEW88_RS23445 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CEW88_RS23455 PF00561 alpha/beta hydrolase fold CEW88_RS23460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS23460 PF03466 LysR substrate binding domain CEW88_RS23480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CEW88_RS23480 PF02706 Chain length determinant protein CEW88_RS23480 PF13807 G-rich domain on putative tyrosine kinase CEW88_RS23500 PF00483 Nucleotidyl transferase CEW88_RS23505 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS23510 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CEW88_RS23520 PF00535 Glycosyl transferase family 2 CEW88_RS23520 PF01501 Glycosyl transferase family 8 CEW88_RS23540 PF00248 Aldo/keto reductase family CEW88_RS23550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CEW88_RS23550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CEW88_RS23560 PF10531 SLBB domain CEW88_RS23560 PF18412 Outer-membrane lipoprotein Wza C-terminal domain CEW88_RS23560 PF02563 Polysaccharide biosynthesis/export protein CEW88_RS23575 PF06082 Exopolysaccharide biosynthesis protein YbjH CEW88_RS23585 PF01507 Phosphoadenosine phosphosulfate reductase family CEW88_RS23590 PF00009 Elongation factor Tu GTP binding domain CEW88_RS23615 PF10134 Replication initiator protein A CEW88_RS23620 PF13614 AAA domain CEW88_RS23620 PF00376 MerR family regulatory protein CEW88_RS23650 PF00005 ABC transporter CEW88_RS23685 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS23695 PF00534 Glycosyl transferases group 1 CEW88_RS23695 PF13439 Glycosyltransferase Family 4 CEW88_RS23710 PF05159 Capsule polysaccharide biosynthesis protein CEW88_RS23720 PF00535 Glycosyl transferase family 2 CEW88_RS23725 PF00535 Glycosyl transferase family 2 CEW88_RS23735 PF00483 Nucleotidyl transferase CEW88_RS23745 PF16363 GDP-mannose 4,6 dehydratase CEW88_RS23750 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CEW88_RS23755 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CEW88_RS23755 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CEW88_RS23755 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CEW88_RS23765 PF01380 SIS domain CEW88_RS23765 PF00571 CBS domain CEW88_RS23770 PF02348 Cytidylyltransferase CEW88_RS23775 PF00793 DAHP synthetase I family CEW88_RS23850 PF02397 Bacterial sugar transferase CEW88_RS23855 PF01943 Polysaccharide biosynthesis protein CEW88_RS23860 PF04230 Polysaccharide pyruvyl transferase CEW88_RS23890 PF03033 Glycosyltransferase family 28 N-terminal domain CEW88_RS23890 PF04101 Glycosyltransferase family 28 C-terminal domain CEW88_RS23905 PF00535 Glycosyl transferase family 2 CEW88_RS23910 PF00535 Glycosyl transferase family 2 CEW88_RS23915 PF01042 Endoribonuclease L-PSP CEW88_RS23920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CEW88_RS23925 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23930 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23930 PF12911 N-terminal TM domain of oligopeptide transport permease C CEW88_RS23935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS23935 PF00005 ABC transporter CEW88_RS23940 PF00005 ABC transporter CEW88_RS23940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CEW88_RS23945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CEW88_RS23945 PF03466 LysR substrate binding domain CEW88_RS23950 PF01177 Asp/Glu/Hydantoin racemase CEW88_RS23955 PF00449 Urease alpha-subunit, N-terminal domain CEW88_RS23955 PF01979 Amidohydrolase family CEW88_RS23960 PF00795 Carbon-nitrogen hydrolase CEW88_RS23965 PF00528 Binding-protein-dependent transport system inner membrane component CEW88_RS23975 PF00005 ABC transporter CEW88_RS23980 PF00497 Bacterial extracellular solute-binding proteins, family 3 CEW88_RS23990 PF13361 UvrD-like helicase C-terminal domain CEW88_RS23990 PF00580 UvrD/REP helicase N-terminal domain CEW88_RS23995 PF00501 AMP-binding enzyme CEW88_RS23995 PF13193 AMP-binding enzyme C-terminal domain CEW88_RS24000 PF00108 Thiolase, N-terminal domain CEW88_RS24000 PF02803 Thiolase, C-terminal domain CEW88_RS24005 PF00881 Nitroreductase family CEW88_RS24010 PF02632 BioY family CEW88_RS24015 PF02361 Cobalt transport protein CEW88_RS24020 PF00005 ABC transporter CEW88_RS24035 PF00067 Cytochrome P450 CEW88_RS24035 PF00258 Flavodoxin CEW88_RS24035 PF00667 FAD binding domain CEW88_RS24035 PF00175 Oxidoreductase NAD-binding domain CEW88_RS24075 PF01548 Transposase CEW88_RS24075 PF02371 Transposase IS116/IS110/IS902 family CEW88_RS24085 PF00440 Bacterial regulatory proteins, tetR family CEW88_RS24090 PF03480 Bacterial extracellular solute-binding protein, family 7 CEW88_RS24100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS24110 PF01979 Amidohydrolase family CEW88_RS24125 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CEW88_RS24140 PF02632 BioY family CEW88_RS24145 PF06968 Biotin and Thiamin Synthesis associated domain CEW88_RS24145 PF04055 Radical SAM superfamily CEW88_RS24150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CEW88_RS24150 PF00529 HlyD membrane-fusion protein of T1SS CEW88_RS24170 PF00313 'Cold-shock' DNA-binding domain CEW88_RS24225 PF00196 Bacterial regulatory proteins, luxR family CEW88_RS24225 PF00072 Response regulator receiver domain CEW88_RS24230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS24230 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS24230 PF00989 PAS fold CEW88_RS24235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CEW88_RS24235 PF00512 His Kinase A (phospho-acceptor) domain CEW88_RS24235 PF13426 PAS domain CEW88_RS24235 PF08448 PAS fold CEW88_RS24235 PF00072 Response regulator receiver domain CEW88_RS24245 PF00202 Aminotransferase class-III CEW88_RS24265 PF13737 Transposase DDE domain CEW88_RS24275 PF00701 Dihydrodipicolinate synthetase family CEW88_RS24285 PF00392 Bacterial regulatory proteins, gntR family CEW88_RS24285 PF07729 FCD domain CEW88_RS24295 PF01476 LysM domain CEW88_RS24295 PF04972 BON domain CEW88_RS24300 PF01928 CYTH domain CEW88_RS24315 PF07859 alpha/beta hydrolase fold CEW88_RS24320 PF00854 POT family CEW88_RS24330 PF13614 AAA domain CEW88_RS24350 PF07690 Major Facilitator Superfamily CEW88_RS24370 PF12464 Maltose acetyltransferase CEW88_RS24370 PF14602 Hexapeptide repeat of succinyl-transferase