locus-tag	class	description
AT01_RS00005	COG0784	Response regulator, receiver
AT01_RS00005	COG0835	chemotaxis
AT01_RS00010	COG3157	Type VI secretion system effector, Hcp
AT01_RS00030	COG3121	Chaperone
AT01_RS00040	COG3188	usher protein
AT01_RS00055	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS00055	COG2205	protein histidine kinase activity
AT01_RS00070	COG3842	ATPase activity
AT01_RS00080	COG1840	ABC-type Fe3 transport system, periplasmic component
AT01_RS00085	COG2271	Major facilitator Superfamily
AT01_RS00100	COG4565	transcriptional regulatory protein
AT01_RS00105	COG3290	protein histidine kinase activity
AT01_RS00110	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AT01_RS00115	COG3052	prosthetic group binding
AT01_RS00120	COG2301	Belongs to the HpcH HpaI aldolase family
AT01_RS00125	COG3051	citrate lyase alpha subunit
AT01_RS00140	COG0471	metal ion transport
AT01_RS00155	COG2814	Major facilitator Superfamily
AT01_RS00190	COG3121	Chaperone
AT01_RS00195	COG1349	DNA-binding transcription factor activity
AT01_RS00200	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT01_RS00225	COG1501	Belongs to the glycosyl hydrolase 31 family
AT01_RS00230	COG2211	Major facilitator Superfamily
AT01_RS00240	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AT01_RS00245	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AT01_RS00275	COG3321	synthase
AT01_RS00275	COG0604	alcohol dehydrogenase
AT01_RS00275	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS00295	COG0840	transmembrane signaling receptor activity
AT01_RS00300	COG1285	pathogenesis
AT01_RS00310	COG2130	NADP-dependent
AT01_RS00315	COG0589	response to stress
AT01_RS00340	COG0643	Histidine kinase
AT01_RS00340	COG2198	Histidine kinase
AT01_RS00345	COG0835	chemotaxis
AT01_RS00355	COG0840	transmembrane signaling receptor activity
AT01_RS00360	COG0840	transmembrane signaling receptor activity
AT01_RS00365	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
AT01_RS00375	COG0745	RESPONSE REGULATOR receiver
AT01_RS00380	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
AT01_RS00385	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AT01_RS00390	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
AT01_RS00400	COG3418	PFAM FlgN family protein
AT01_RS00405	COG2747	anti-sigma28 factor FlgM
AT01_RS00415	COG1815	bacterial-type flagellum-dependent cell motility
AT01_RS00420	COG1558	bacterial-type flagellum-dependent cell motility
AT01_RS00425	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AT01_RS00460	COG1256	bacterial-type flagellum assembly
AT01_RS00465	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AT01_RS00490	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AT01_RS00505	COG3144	bacterial-type flagellum assembly
AT01_RS00515	COG1157	protein secretion by the type III secretion system
AT01_RS00535	COG1677	Flagellar hook-basal body complex protein FliE
AT01_RS00540	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AT01_RS00545	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
AT01_RS00575	COG1191	sigma factor activity
AT01_RS00585	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AT01_RS00590	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS00595	COG0765	amino acid transport
AT01_RS00600	COG1126	abc transporter atp-binding protein
AT01_RS00605	COG0506	proline dehydrogenase activity
AT01_RS00605	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AT01_RS00605	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AT01_RS00615	COG0672	)-iron permease
AT01_RS00635	COG1113	amino acid transport
AT01_RS00645	COG1187	pseudouridine synthase activity
AT01_RS00655	COG2226	methyltransferase
AT01_RS00665	COG0366	Alpha amylase catalytic
AT01_RS00680	COG2197	response regulator
AT01_RS00685	COG0322	excinuclease ABC activity
AT01_RS00690	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AT01_RS00745	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AT01_RS00785	COG0625	glutathione transferase activity
AT01_RS00845	COG3328	transposase activity
AT01_RS00890	COG4679	PFAM Phage derived protein Gp49-like (DUF891)
AT01_RS00970	COG0625	glutathione transferase activity
AT01_RS01000	COG4251	negative regulation of phosphorylation
AT01_RS01000	COG5001	Diguanylate cyclase
AT01_RS01000	COG2203	Gaf domain
AT01_RS01000	COG3706	GGDEF domain
AT01_RS01005	COG3008	intermembrane lipid transfer
AT01_RS01010	COG2995	paraquat-inducible protein a
AT01_RS01015	COG1956	GAF domain-containing protein
AT01_RS01025	COG0793	Belongs to the peptidase S41A family
AT01_RS01030	COG0501	Belongs to the peptidase M48B family
AT01_RS01035	COG2814	Major facilitator Superfamily
AT01_RS01040	COG0823	Involved in the tonB-independent uptake of proteins
AT01_RS01050	COG3023	N-Acetylmuramoyl-L-alanine amidase
AT01_RS01055	COG1823	symporter activity
AT01_RS01060	COG1988	membrane-bound metal-dependent
AT01_RS01065	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AT01_RS01080	COG3842	ATPase activity
AT01_RS01085	COG0395	ABC-type sugar transport system, permease component
AT01_RS01090	COG1175	transmembrane transport
AT01_RS01100	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS01105	COG1917	Cupin 2, conserved barrel domain protein
AT01_RS01110	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT01_RS01120	COG0583	DNA-binding transcription factor activity
AT01_RS01125	COG0427	acetyl-CoA hydrolase
AT01_RS01130	COG1024	Enoyl-CoA hydratase
AT01_RS01135	COG1703	isobutyryl-CoA mutase activity
AT01_RS01140	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AT01_RS01140	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AT01_RS01145	COG3001	Fructosamine kinase
AT01_RS01150	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT01_RS01155	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT01_RS01160	COG1121	(ABC) transporter
AT01_RS01165	COG0803	Belongs to the bacterial solute-binding protein 9 family
AT01_RS01195	COG1811	Na channel or pump
AT01_RS01200	COG4249	Peptidase C14 caspase catalytic subunit p20
AT01_RS01210	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AT01_RS01215	COG0291	Belongs to the bacterial ribosomal protein bL35 family
AT01_RS01220	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AT01_RS01235	COG0776	regulation of translation
AT01_RS01240	COG2314	TM2 domain
AT01_RS01245	COG4139	cobalamin transport
AT01_RS01250	COG0386	Belongs to the glutathione peroxidase family
AT01_RS01255	COG4138	Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system
AT01_RS01260	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AT01_RS01265	COG0463	Glycosyl transferase, family 2
AT01_RS01275	COG0726	polysaccharide deacetylase
AT01_RS01280	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AT01_RS01285	COG2076	Multidrug Resistance protein
AT01_RS01290	COG2076	Multidrug Resistance protein
AT01_RS01295	COG0791	NLP P60 protein
AT01_RS01300	COG0095	Lipoate-protein ligase
AT01_RS01310	COG4558	Periplasmic binding protein
AT01_RS01315	COG3720	iron ion transport
AT01_RS01320	COG4771	TonB-dependent receptor
AT01_RS01330	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
AT01_RS01335	COG0574	Belongs to the PEP-utilizing enzyme family
AT01_RS01335	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AT01_RS01340	COG0628	permease
AT01_RS01345	COG0247	lactate metabolic process
AT01_RS01345	COG0277	FAD linked oxidase domain protein
AT01_RS01350	COG2050	protein possibly involved in aromatic compounds catabolism
AT01_RS01355	COG0316	Belongs to the HesB IscA family
AT01_RS01360	COG0719	Fe-S assembly protein
AT01_RS01365	COG0396	ATPase activity
AT01_RS01370	COG0719	Fe-S assembly protein
AT01_RS01385	COG1376	ErfK ybiS ycfS ynhG family protein
AT01_RS01385	COG1388	LysM domain
AT01_RS01415	COG0534	Mate efflux family protein
AT01_RS01420	COG0307	riboflavin synthase, alpha
AT01_RS01425	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AT01_RS01430	COG2814	Major facilitator Superfamily
AT01_RS01435	COG0583	DNA-binding transcription factor activity
AT01_RS01440	COG1609	Transcriptional regulator
AT01_RS01450	COG0791	NLP P60 protein
AT01_RS01455	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AT01_RS01460	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT01_RS01465	COG0346	lactoylglutathione lyase activity
AT01_RS01470	COG1902	pentaerythritol trinitrate reductase activity
AT01_RS01475	COG1309	transcriptional regulator
AT01_RS01480	COG2194	sulfuric ester hydrolase activity
AT01_RS01485	COG3313	Fe-S protein
AT01_RS01490	COG4989	oxidoreductase activity
AT01_RS01495	COG1289	transmembrane transporter activity
AT01_RS01500	COG1566	PFAM secretion protein HlyD family protein
AT01_RS01510	COG1846	Transcriptional regulator
AT01_RS01515	COG3133	Outer membrane lipoprotein
AT01_RS01520	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
AT01_RS01525	COG3895	Periplasmic Protein
AT01_RS01535	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AT01_RS01545	COG0625	glutathione transferase activity
AT01_RS01565	COG3104	oligopeptide transport
AT01_RS01575	COG4172	Belongs to the ABC transporter superfamily
AT01_RS01580	COG4172	Belongs to the ABC transporter superfamily
AT01_RS01585	COG4171	peptide transport system, permease
AT01_RS01590	COG4168	peptide transport system, permease
AT01_RS01595	COG4166	transmembrane transport
AT01_RS01610	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AT01_RS01615	COG1842	Phage shock protein A
AT01_RS01625	COG1983	PspC domain protein
AT01_RS01635	COG3106	COG3106 Predicted ATPase
AT01_RS01640	COG3768	UPF0283 membrane protein
AT01_RS01645	COG5654	RES domain protein
AT01_RS01650	COG5642	Protein of unknown function (DUF2384)
AT01_RS01660	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AT01_RS01665	COG4948	Mandelate Racemase Muconate Lactonizing
AT01_RS01670	COG2866	Carboxypeptidase
AT01_RS01675	COG4166	transmembrane transport
AT01_RS01690	COG0598	Magnesium transport protein CorA
AT01_RS01695	COG0037	tRNA processing
AT01_RS01705	COG1013	pyruvate-flavodoxin oxidoreductase activity
AT01_RS01705	COG0674	pyruvate-flavodoxin oxidoreductase activity
AT01_RS01705	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT01_RS01705	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AT01_RS01715	COG1285	pathogenesis
AT01_RS01720	COG3042	response to heat
AT01_RS01725	COG3187	Heat shock protein
AT01_RS01730	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AT01_RS01735	COG2911	Protein conserved in bacteria
AT01_RS01745	COG3784	Protein of unknown function (DUF1318)
AT01_RS01750	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
AT01_RS01755	COG1643	Atp-dependent helicase
AT01_RS01760	COG3344	reverse transcriptase
AT01_RS01775	COG3046	protein related to deoxyribodipyrimidine photolyase
AT01_RS01810	COG0740	serine-type endopeptidase activity
AT01_RS01865	COG3344	reverse transcriptase
AT01_RS01880	COG3591	Belongs to the peptidase S1B family
AT01_RS01890	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AT01_RS01895	COG2205	protein histidine kinase activity
AT01_RS01900	COG0745	RESPONSE REGULATOR receiver
AT01_RS01910	COG0531	amino acid
AT01_RS01925	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AT01_RS01930	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AT01_RS01935	COG0589	response to stress
AT01_RS01940	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AT01_RS01945	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT01_RS01955	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
AT01_RS01970	COG1011	Hydrolase
AT01_RS01980	COG0440	acetolactate synthase activity
AT01_RS01985	COG0028	Belongs to the TPP enzyme family
AT01_RS02020	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AT01_RS02025	COG0583	DNA-binding transcription factor activity
AT01_RS02045	COG3727	T/G mismatch-specific endonuclease activity
AT01_RS02060	COG0625	glutathione transferase activity
AT01_RS02075	COG3338	carbonate dehydratase activity
AT01_RS02095	COG4221	oxidoreductase activity
AT01_RS02105	COG1742	UPF0060 membrane protein
AT01_RS02125	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AT01_RS02130	COG1940	carbohydrate kinase activity
AT01_RS02135	COG0583	DNA-binding transcription factor activity
AT01_RS02140	COG2814	Major facilitator Superfamily
AT01_RS02155	COG0114	fumarate hydratase activity
AT01_RS02160	COG1482	cell wall glycoprotein biosynthetic process
AT01_RS02165	COG5339	Protein conserved in bacteria
AT01_RS02175	COG1609	Transcriptional regulator
AT01_RS02180	COG1263	PTS System
AT01_RS02180	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT01_RS02185	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AT01_RS02190	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
AT01_RS02195	COG0385	Bile acid
AT01_RS02200	COG0673	inositol 2-dehydrogenase activity
AT01_RS02210	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS02215	COG1129	ABC transporter
AT01_RS02220	COG1879	ABC-type sugar transport system periplasmic component
AT01_RS02235	COG2723	6-phospho-beta-galactosidase activity
AT01_RS02240	COG2274	protein secretion by the type I secretion system
AT01_RS02250	COG2274	protein secretion by the type I secretion system
AT01_RS02255	COG2759	Belongs to the formate--tetrahydrofolate ligase family
AT01_RS02265	COG4657	Part of a membrane complex involved in electron transport
AT01_RS02280	COG3708	Transcriptional regulator
AT01_RS02280	COG2207	Transcriptional regulator
AT01_RS02290	COG4659	FMN binding
AT01_RS02300	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AT01_RS02310	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
AT01_RS02315	COG1966	Carbon starvation protein
AT01_RS02320	COG2879	small protein
AT01_RS02325	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AT01_RS02330	COG1349	DNA-binding transcription factor activity
AT01_RS02350	COG0023	Translation Initiation Factor
AT01_RS02355	COG0284	orotidine-5'-phosphate decarboxylase activity
AT01_RS02370	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AT01_RS02375	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AT01_RS02380	COG0671	phosphoesterase, PA-phosphatase related
AT01_RS02390	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AT01_RS02410	COG0583	DNA-binding transcription factor activity
AT01_RS02425	COG0616	signal peptide processing
AT01_RS02430	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS02440	COG1187	pseudouridine synthase activity
AT01_RS02445	COG0009	L-threonylcarbamoyladenylate synthase
AT01_RS02450	COG0613	PHP domain protein
AT01_RS02460	COG0512	Glutamine amidotransferase of anthranilate synthase
AT01_RS02470	COG0134	indole-3-glycerol-phosphate synthase activity
AT01_RS02470	COG0135	phosphoribosylanthranilate isomerase activity
AT01_RS02475	COG0133	tryptophan synthase activity
AT01_RS02490	COG3047	cAMP biosynthetic process
AT01_RS02505	COG2917	probably involved in intracellular septation
AT01_RS02515	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
AT01_RS02520	COG2350	Protein conserved in bacteria
AT01_RS02530	COG2200	EAL domain
AT01_RS02545	COG4608	Belongs to the ABC transporter superfamily
AT01_RS02550	COG0444	Belongs to the ABC transporter superfamily
AT01_RS02555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT01_RS02570	COG2095	MarC family integral membrane protein
AT01_RS02575	COG1012	belongs to the aldehyde dehydrogenase family
AT01_RS02575	COG1454	alcohol dehydrogenase
AT01_RS02595	COG0745	RESPONSE REGULATOR receiver
AT01_RS02600	COG1752	Esterase of the alpha-beta hydrolase superfamily
AT01_RS02610	COG3012	SEC-C Motif Domain Protein
AT01_RS02615	COG0788	formyltetrahydrofolate deformylase activity
AT01_RS02630	COG0583	DNA-binding transcription factor activity
AT01_RS02635	COG0708	Exodeoxyribonuclease III
AT01_RS02640	COG0494	nUDIX hydrolase
AT01_RS02650	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AT01_RS02660	COG0778	Nitroreductase
AT01_RS02670	COG0252	asparaginase activity
AT01_RS02675	COG1335	isochorismatase
AT01_RS02680	COG3139	Protein of unknown function (DUF1315)
AT01_RS02700	COG3713	MltA-interacting MipA family protein
AT01_RS02705	COG2766	serine protein kinase
AT01_RS02710	COG2718	Belongs to the UPF0229 family
AT01_RS02720	COG2199	diguanylate cyclase activity
AT01_RS02720	COG2200	EAL domain
AT01_RS02720	COG2202	Pas domain
AT01_RS02725	COG2814	Major facilitator Superfamily
AT01_RS02730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AT01_RS02735	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT01_RS02740	COG2719	SpoVR family
AT01_RS02745	COG2186	Transcriptional regulator
AT01_RS02750	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AT01_RS02755	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
AT01_RS02770	COG2983	Belongs to the UPF0260 family
AT01_RS02775	COG0179	Fumarylacetoacetate (FAA) hydrolase
AT01_RS02780	COG2951	lytic endotransglycosylase activity
AT01_RS02795	COG0850	regulation of cytokinetic process
AT01_RS02800	COG2894	cell division
AT01_RS02805	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AT01_RS02810	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AT01_RS02815	COG0318	PFAM AMP-dependent synthetase and ligase
AT01_RS02820	COG3065	identical protein binding
AT01_RS02830	COG1199	ATP-dependent helicase activity
AT01_RS02835	COG0251	oxidation-reduction process
AT01_RS02840	COG2076	Multidrug Resistance protein
AT01_RS02845	COG2076	Multidrug Resistance protein
AT01_RS02850	COG0800	Aldolase
AT01_RS02855	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AT01_RS02860	COG1737	Transcriptional regulator
AT01_RS02865	COG0469	pyruvate kinase activity
AT01_RS02870	COG1560	Kdo2-lipid A biosynthetic process
AT01_RS02875	COG0739	heme binding
AT01_RS02880	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AT01_RS02885	COG1121	(ABC) transporter
AT01_RS02890	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT01_RS02895	COG3104	oligopeptide transport
AT01_RS02900	COG2255	four-way junction helicase activity
AT01_RS02905	COG0632	four-way junction helicase activity
AT01_RS02915	COG0217	transcriptional regulatory protein
AT01_RS02920	COG0494	nUDIX hydrolase
AT01_RS02925	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
AT01_RS02930	COG1335	isochorismatase
AT01_RS02935	COG1801	Protein of unknown function DUF72
AT01_RS02940	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AT01_RS02955	COG3142	Participates in the control of copper homeostasis
AT01_RS02960	COG3102	Protein conserved in bacteria
AT01_RS02975	COG0673	inositol 2-dehydrogenase activity
AT01_RS02985	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AT01_RS02990	COG0477	Major facilitator Superfamily
AT01_RS03000	COG3381	protein complex oligomerization
AT01_RS03010	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AT01_RS03030	COG3706	GGDEF domain
AT01_RS03035	COG0659	secondary active sulfate transmembrane transporter activity
AT01_RS03040	COG2877	3-deoxy-8-phosphooctulonate synthase activity
AT01_RS03055	COG2890	protein-(glutamine-N5) methyltransferase activity
AT01_RS03060	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AT01_RS03065	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AT01_RS03070	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
AT01_RS03080	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AT01_RS03090	COG0193	aminoacyl-tRNA hydrolase activity
AT01_RS03100	COG0012	GTP binding
AT01_RS03105	COG1393	Belongs to the ArsC family
AT01_RS03110	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AT01_RS03120	COG4942	peptidase
AT01_RS03130	COG1802	Transcriptional regulator
AT01_RS03135	COG4211	Belongs to the binding-protein-dependent transport system permease family
AT01_RS03140	COG1129	ABC transporter
AT01_RS03165	COG1228	amidohydrolase
AT01_RS03185	COG3724	N-succinylarginine dihydrolase activity
AT01_RS03195	COG3138	arginine N-succinyltransferase
AT01_RS03200	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AT01_RS03205	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT01_RS03210	COG1271	oxidase subunit
AT01_RS03215	COG1294	oxidase, subunit
AT01_RS03225	COG3850	Histidine kinase
AT01_RS03230	COG2814	Major facilitator Superfamily
AT01_RS03240	COG0387	Pfam Sodium calcium exchanger
AT01_RS03245	COG1702	phosphate starvation-inducible protein PhoH
AT01_RS03255	COG3658	cytochrome
AT01_RS03260	COG1215	transferase activity, transferring glycosyl groups
AT01_RS03265	COG0726	polysaccharide deacetylase
AT01_RS03265	COG1649	PFAM Uncharacterised BCR, COG1649
AT01_RS03270	COG0457	Tetratricopeptide repeat
AT01_RS03280	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AT01_RS03290	COG0500	methyltransferase
AT01_RS03290	COG3615	Tellurite resistance protein tehB
AT01_RS03300	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AT01_RS03305	COG1136	(ABC) transporter
AT01_RS03305	COG0577	efflux transmembrane transporter activity
AT01_RS03315	COG0577	efflux transmembrane transporter activity
AT01_RS03315	COG1136	(ABC) transporter
AT01_RS03330	COG0672	)-iron permease
AT01_RS03340	COG2066	Belongs to the glutaminase family
AT01_RS03345	COG3328	transposase activity
AT01_RS03350	COG3290	protein histidine kinase activity
AT01_RS03355	COG4565	transcriptional regulatory protein
AT01_RS03370	COG0346	lactoylglutathione lyase activity
AT01_RS03375	COG0561	phosphatase activity
AT01_RS03385	COG2205	protein histidine kinase activity
AT01_RS03385	COG3437	response regulator, receiver
AT01_RS03385	COG3850	Histidine kinase
AT01_RS03385	COG4999	Histidine kinase
AT01_RS03390	COG3250	beta-galactosidase activity
AT01_RS03410	COG1215	transferase activity, transferring glycosyl groups
AT01_RS03420	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
AT01_RS03440	COG0058	SHG alpha-glucan phosphorylase activity
AT01_RS03525	COG3157	Type VI secretion system effector, Hcp
AT01_RS03690	COG3566	protein conserved in bacteria
AT01_RS03700	COG3567	Phage-associated protein, HI1409 family
AT01_RS03710	COG3328	transposase activity
AT01_RS03735	COG1475	DNA binding
AT01_RS03755	COG3772	lysozyme
AT01_RS03840	COG1396	sequence-specific DNA binding
AT01_RS03875	COG0582	viral genome integration into host DNA
AT01_RS03885	COG1276	copper resistance
AT01_RS03890	COG2372	response to copper ion
AT01_RS03895	COG1528	Iron-storage protein
AT01_RS03910	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT01_RS03915	COG1770	oligopeptidase
AT01_RS03925	COG3097	Belongs to the UPF0267 family
AT01_RS03930	COG3141	response to X-ray
AT01_RS03935	COG0513	Belongs to the DEAD box helicase family
AT01_RS03940	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AT01_RS03945	COG3140	Belongs to the UPF0181 family
AT01_RS03955	COG0494	nUDIX hydrolase
AT01_RS03960	COG1760	l-serine dehydratase
AT01_RS03965	COG1253	flavin adenine dinucleotide binding
AT01_RS03970	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS03970	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT01_RS03975	COG3715	PTS system
AT01_RS03980	COG3716	PTS system mannose fructose sorbose family IID component
AT01_RS03990	COG1971	Probably functions as a manganese efflux pump
AT01_RS04005	COG2226	methyltransferase
AT01_RS04010	COG0768	penicillin binding
AT01_RS04015	COG1496	oxidoreductase activity
AT01_RS04035	COG1113	amino acid transport
AT01_RS04070	COG2207	Transcriptional regulator
AT01_RS04095	COG2801	Transposase and inactivated derivatives
AT01_RS04100	COG2963	transposase activity
AT01_RS04105	COG1132	(ABC) transporter
AT01_RS04115	COG1733	regulation of RNA biosynthetic process
AT01_RS04120	COG0702	epimerase
AT01_RS04125	COG3240	lipase activity
AT01_RS04165	COG0840	transmembrane signaling receptor activity
AT01_RS04200	COG0538	isocitrate dehydrogenase activity
AT01_RS04205	COG1187	pseudouridine synthase activity
AT01_RS04215	COG0482	sulfurtransferase activity
AT01_RS04220	COG2915	High frequency lysogenization protein hflD homolog
AT01_RS04225	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AT01_RS04235	COG0745	RESPONSE REGULATOR receiver
AT01_RS04245	COG2850	peptidyl-arginine hydroxylation
AT01_RS04260	COG1940	carbohydrate kinase activity
AT01_RS04265	COG4591	ABC-type transport system involved in lipoprotein release permease component
AT01_RS04275	COG4591	ABC-type transport system involved in lipoprotein release permease component
AT01_RS04280	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AT01_RS04285	COG3134	Outer membrane lipoprotein
AT01_RS04290	COG1252	NADH dehydrogenase
AT01_RS04295	COG3150	esterase
AT01_RS04310	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
AT01_RS04315	COG5633	Lipoprotein
AT01_RS04320	COG0537	adenosine 5'-monophosphoramidase activity
AT01_RS04325	COG1263	PTS System
AT01_RS04325	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT01_RS04330	COG0084	hydrolase, TatD family'
AT01_RS04335	COG0470	DNA polymerase III
AT01_RS04345	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AT01_RS04355	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT01_RS04365	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS04375	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AT01_RS04380	COG0416	fatty acid biosynthetic process
AT01_RS04385	COG0333	Belongs to the bacterial ribosomal protein bL32 family
AT01_RS04390	COG1399	metal-binding, possibly nucleic acid-binding protein
AT01_RS04400	COG0564	pseudouridine synthase activity
AT01_RS04405	COG1530	ribonuclease E activity
AT01_RS04405	COG1530	ribonuclease E activity
AT01_RS04410	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AT01_RS04420	COG0418	dihydroorotase activity
AT01_RS04440	COG2197	response regulator
AT01_RS04450	COG0628	permease
AT01_RS04465	COG1560	Kdo2-lipid A biosynthetic process
AT01_RS04470	COG2259	Doxx family
AT01_RS04475	COG2814	Major facilitator Superfamily
AT01_RS04485	COG0346	lactoylglutathione lyase activity
AT01_RS04490	COG5645	(Lipo)protein
AT01_RS04495	COG2943	transferase activity, transferring hexosyl groups
AT01_RS04500	COG3131	Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
AT01_RS04525	COG3916	Acyl-homoserine-lactone synthase
AT01_RS04530	COG2771	luxR family
AT01_RS04535	COG0668	transmembrane transport
AT01_RS04550	COG2920	part of a sulfur-relay system
AT01_RS04555	COG1254	Belongs to the acylphosphatase family
AT01_RS04565	COG3785	DNA binding
AT01_RS04570	COG1832	CoA-binding protein
AT01_RS04580	COG1803	Methylglyoxal synthase
AT01_RS04585	COG0210	DNA helicase
AT01_RS04590	COG3304	Inner membrane component domain
AT01_RS04595	COG1289	transmembrane transporter activity
AT01_RS04600	COG3070	regulator of competence-specific genes
AT01_RS04605	COG5404	Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division
AT01_RS04620	COG1067	ATP-dependent peptidase activity
AT01_RS04625	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
AT01_RS04630	COG3009	Protein conserved in bacteria
AT01_RS04635	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AT01_RS04635	COG3008	intermembrane lipid transfer
AT01_RS04640	COG2995	paraquat-inducible protein a
AT01_RS04645	COG0488	(ABC) transporter
AT01_RS04650	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
AT01_RS04650	COG0116	Belongs to the methyltransferase superfamily
AT01_RS04655	COG0633	Ferredoxin
AT01_RS04655	COG3217	Mosc domain protein beta barrel domain protein
AT01_RS04665	COG0167	dihydroorotate dehydrogenase activity
AT01_RS04670	COG0308	aminopeptidase N
AT01_RS04675	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AT01_RS04680	COG0017	Asparaginyl-tRNA synthetase
AT01_RS04690	COG1448	Aminotransferase
AT01_RS04695	COG2200	EAL domain
AT01_RS04700	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT01_RS04705	COG3108	Peptidase M15
AT01_RS04710	COG2989	Protein conserved in bacteria
AT01_RS04715	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
AT01_RS04725	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
AT01_RS04730	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AT01_RS04735	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AT01_RS04740	COG3173	Aminoglycoside phosphotransferase
AT01_RS04750	COG2835	tetraacyldisaccharide 4'-kinase activity
AT01_RS04755	COG1278	Cold shock
AT01_RS04765	COG5383	Protein conserved in bacteria
AT01_RS04770	COG1663	tetraacyldisaccharide 4'-kinase activity
AT01_RS04780	COG2333	competence protein COMEC
AT01_RS04780	COG0658	competence protein
AT01_RS04790	COG0539	negative regulation of cytoplasmic translation
AT01_RS04800	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
AT01_RS04805	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
AT01_RS04810	COG0252	asparaginase activity
AT01_RS04815	COG1944	ATP diphosphatase activity
AT01_RS04820	COG2116	formate transmembrane transporter activity
AT01_RS04825	COG1882	Formate acetyltransferase
AT01_RS04830	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AT01_RS04835	COG2814	Major facilitator Superfamily
AT01_RS04840	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AT01_RS04845	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AT01_RS04850	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
AT01_RS04855	COG3107	peptidoglycan biosynthetic process
AT01_RS04855	COG1674	ftsk spoiiie
AT01_RS04865	COG0492	ferredoxin-NADP+ reductase activity
AT01_RS04875	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AT01_RS04880	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
AT01_RS04885	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AT01_RS04890	COG0542	response to heat
AT01_RS04895	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
AT01_RS04900	COG1278	Cold shock
AT01_RS04910	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT01_RS04915	COG2990	Protein conserved in bacteria
AT01_RS04920	COG3593	DNA synthesis involved in DNA repair
AT01_RS04925	COG2431	L-lysine efflux transmembrane transporter activity
AT01_RS04930	COG1151	hydroxylamine reductase activity
AT01_RS04935	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT01_RS04940	COG0028	Belongs to the TPP enzyme family
AT01_RS04950	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AT01_RS04955	COG0702	epimerase
AT01_RS04960	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT01_RS04970	COG1126	abc transporter atp-binding protein
AT01_RS04975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS04980	COG4215	(ABC) transporter
AT01_RS04985	COG4160	amino acid transport
AT01_RS04990	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS05005	COG1177	transmembrane transport
AT01_RS05010	COG1176	ABC-type spermidine putrescine transport system, permease component I
AT01_RS05015	COG3842	ATPase activity
AT01_RS05020	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AT01_RS05040	COG0569	domain protein
AT01_RS05040	COG2985	domain, Protein
AT01_RS05075	COG0671	phosphoesterase, PA-phosphatase related
AT01_RS05085	COG1349	DNA-binding transcription factor activity
AT01_RS05090	COG0814	amino acid
AT01_RS05095	COG1760	l-serine dehydratase
AT01_RS05100	COG1686	Belongs to the peptidase S11 family
AT01_RS05110	COG0626	cystathionine gamma-synthase activity
AT01_RS05125	COG0625	glutathione transferase activity
AT01_RS05130	COG4771	TonB-dependent receptor
AT01_RS05135	COG1120	ATPase activity
AT01_RS05140	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS05150	COG0833	amino acid
AT01_RS05155	COG0583	DNA-binding transcription factor activity
AT01_RS05160	COG2855	membrane
AT01_RS05165	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
AT01_RS05170	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AT01_RS05170	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AT01_RS05170	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AT01_RS05175	COG1105	Belongs to the carbohydrate kinase PfkB family
AT01_RS05190	COG3005	denitrification pathway
AT01_RS05195	COG0243	molybdopterin cofactor binding
AT01_RS05210	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AT01_RS05220	COG0246	Mannitol dehydrogenase
AT01_RS05225	COG2186	Transcriptional regulator
AT01_RS05235	COG0523	cobalamin synthesis protein
AT01_RS05240	COG0671	phosphoesterase, PA-phosphatase related
AT01_RS05245	COG0791	NLP P60 protein
AT01_RS05250	COG2200	EAL domain
AT01_RS05255	COG4166	transmembrane transport
AT01_RS05260	COG4174	ABC transporter (Permease)
AT01_RS05265	COG4239	(ABC) transporter, permease
AT01_RS05270	COG4172	Belongs to the ABC transporter superfamily
AT01_RS05280	COG2814	Major facilitator Superfamily
AT01_RS05285	COG1187	pseudouridine synthase activity
AT01_RS05290	COG1061	Type III restriction enzyme res subunit
AT01_RS05300	COG3081	Nucleoid-associated protein
AT01_RS05305	COG3082	Protein of unknown function (DUF1414)
AT01_RS05310	COG3083	sulfuric ester hydrolase activity
AT01_RS05335	COG3122	Protein conserved in bacteria
AT01_RS05360	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AT01_RS05375	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AT01_RS05375	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AT01_RS05380	COG0583	DNA-binding transcription factor activity
AT01_RS05400	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AT01_RS05410	COG4865	methylaspartate mutase activity
AT01_RS05415	COG3799	methylaspartate ammonia-lyase activity
AT01_RS05430	COG1301	dicarboxylic acid transport
AT01_RS05625	COG2223	nitrite transmembrane transporter activity
AT01_RS05630	COG2198	Histidine kinase
AT01_RS05630	COG0642	Histidine kinase
AT01_RS05635	COG2197	response regulator
AT01_RS05640	COG0784	Response regulator, receiver
AT01_RS05640	COG2205	protein histidine kinase activity
AT01_RS05655	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AT01_RS05665	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT01_RS05670	COG4574	serine-type endopeptidase inhibitor activity
AT01_RS05700	COG0814	amino acid
AT01_RS05720	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS05735	COG1441	menaquinone biosynthetic process
AT01_RS05740	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AT01_RS05750	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
AT01_RS05755	COG1169	isochorismate synthase
AT01_RS05760	COG4575	ribosome binding
AT01_RS05780	COG1007	ATP synthesis coupled electron transport
AT01_RS05785	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT01_RS05790	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AT01_RS05795	COG0713	ATP synthesis coupled electron transport
AT01_RS05800	COG0839	Belongs to the complex I subunit 6 family
AT01_RS05805	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT01_RS05810	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
AT01_RS05815	COG1034	ATP synthesis coupled electron transport
AT01_RS05830	COG0649	NAD binding
AT01_RS05830	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT01_RS05835	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT01_RS05845	COG0583	DNA-binding transcription factor activity
AT01_RS05850	COG0436	Aminotransferase
AT01_RS05855	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
AT01_RS05860	COG0490	domain, Protein
AT01_RS05860	COG0471	metal ion transport
AT01_RS05865	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT01_RS05870	COG3013	Belongs to the UPF0304 family
AT01_RS05875	COG3092	negative regulation of chromosome organization
AT01_RS05885	COG0857	belongs to the CobB CobQ family
AT01_RS05885	COG0280	phosphate acetyltransferase
AT01_RS05890	COG1609	Transcriptional regulator
AT01_RS05895	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS05905	COG3037	sugar-specific permease SgaT UlaA
AT01_RS05910	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
AT01_RS05915	COG0622	Phosphoesterase
AT01_RS05925	COG1090	epimerase
AT01_RS05945	COG4160	amino acid transport
AT01_RS05950	COG4215	(ABC) transporter
AT01_RS05955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS05965	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AT01_RS05970	COG1286	toxin biosynthetic process
AT01_RS05975	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AT01_RS05980	COG0285	dihydrofolate synthase activity
AT01_RS05985	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AT01_RS05990	COG0586	Pfam SNARE associated Golgi protein
AT01_RS06000	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AT01_RS06015	COG0697	spore germination
AT01_RS06020	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AT01_RS06045	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AT01_RS06055	COG1794	racemase activity, acting on amino acids and derivatives
AT01_RS06065	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AT01_RS06070	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
AT01_RS06070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
AT01_RS06080	COG3101	peptidyl-lysine hydroxylation
AT01_RS06085	COG0730	response to heat
AT01_RS06090	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
AT01_RS06100	COG2890	protein-(glutamine-N5) methyltransferase activity
AT01_RS06105	COG2840	Smr protein MutS2
AT01_RS06110	COG2062	phosphohistidine phosphatase, SixA
AT01_RS06115	COG1024	Enoyl-CoA hydratase
AT01_RS06115	COG1250	3-hydroxyacyl-CoA dehydrogenase
AT01_RS06120	COG0183	Belongs to the thiolase family
AT01_RS06125	COG3691	Protein conserved in bacteria
AT01_RS06140	COG3088	subunit of a heme lyase
AT01_RS06140	COG4235	cytochrome complex assembly
AT01_RS06145	COG3088	subunit of a heme lyase
AT01_RS06145	COG4235	cytochrome complex assembly
AT01_RS06150	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AT01_RS06155	COG1138	Cytochrome C-type biogenesis protein
AT01_RS06160	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
AT01_RS06165	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AT01_RS06170	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AT01_RS06175	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AT01_RS06185	COG2116	formate transmembrane transporter activity
AT01_RS06190	COG2824	Alkylphosphonate utilization operon protein PhnA
AT01_RS06200	COG0582	viral genome integration into host DNA
AT01_RS06205	COG2963	transposase activity
AT01_RS06210	COG2801	Transposase and inactivated derivatives
AT01_RS06290	COG2963	transposase activity
AT01_RS06295	COG2801	Transposase and inactivated derivatives
AT01_RS06305	COG3121	Chaperone
AT01_RS06310	COG3188	usher protein
AT01_RS06325	COG2197	response regulator
AT01_RS06330	COG2205	protein histidine kinase activity
AT01_RS06330	COG2198	Histidine kinase
AT01_RS06330	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS06330	COG0784	Response regulator, receiver
AT01_RS06355	COG1228	amidohydrolase
AT01_RS06425	COG3328	transposase activity
AT01_RS06445	COG3328	transposase activity
AT01_RS06685	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AT01_RS06735	COG0582	viral genome integration into host DNA
AT01_RS06745	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AT01_RS06750	COG2501	S4 domain
AT01_RS06755	COG0215	cysteine-tRNA ligase activity
AT01_RS06760	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AT01_RS06765	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT01_RS06770	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AT01_RS06775	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AT01_RS06780	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AT01_RS06785	COG4181	ATPase activity
AT01_RS06790	COG2755	lipolytic protein G-D-S-L family
AT01_RS06795	COG0300	oxidoreductase activity
AT01_RS06800	COG3118	belongs to the thioredoxin family
AT01_RS06805	COG0330	HflC and HflK could
AT01_RS06810	COG1585	Membrane protein implicated in regulation of membrane protease activity
AT01_RS06825	COG0789	Transcriptional regulator
AT01_RS06830	COG2217	Heavy metal translocating P-type atpase
AT01_RS06835	COG3735	TraB family
AT01_RS06855	COG0737	Belongs to the 5'-nucleotidase family
AT01_RS06870	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AT01_RS06870	COG4651	solute:proton antiporter activity
AT01_RS06875	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT01_RS06895	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT01_RS06900	COG0297	glycogen (starch) synthase activity
AT01_RS06905	COG0438	transferase activity, transferring glycosyl groups
AT01_RS06910	COG1215	transferase activity, transferring glycosyl groups
AT01_RS06915	COG2244	polysaccharide biosynthetic process
AT01_RS06920	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
AT01_RS06925	COG0563	adenylate kinase activity
AT01_RS06930	COG0326	Molecular chaperone. Has ATPase activity
AT01_RS06935	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AT01_RS06945	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AT01_RS06950	COG2963	transposase activity
AT01_RS06960	COG3328	transposase activity
AT01_RS06980	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AT01_RS06985	COG2832	Protein of unknown function (DUF454)
AT01_RS07000	COG3264	Mechanosensitive ion channel
AT01_RS07000	COG1196	nuclear chromosome segregation
AT01_RS07005	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AT01_RS07010	COG1309	transcriptional regulator
AT01_RS07015	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT01_RS07020	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT01_RS07025	COG3457	Alanine racemase
AT01_RS07030	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AT01_RS07035	COG0254	rRNA binding
AT01_RS07040	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AT01_RS07045	COG0803	Belongs to the bacterial solute-binding protein 9 family
AT01_RS07050	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AT01_RS07075	COG3695	enzyme binding
AT01_RS07080	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AT01_RS07085	COG1946	Acyl-CoA thioesterase
AT01_RS07090	COG0004	ammonium transporteR
AT01_RS07095	COG0347	Belongs to the P(II) protein family
AT01_RS07100	COG1132	(ABC) transporter
AT01_RS07105	COG1132	(ABC) transporter
AT01_RS07110	COG1522	sequence-specific DNA binding
AT01_RS07115	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
AT01_RS07120	COG0561	phosphatase activity
AT01_RS07125	COG4533	DNA binding
AT01_RS07130	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
AT01_RS07135	COG0824	Thioesterase
AT01_RS07140	COG1555	photosystem II stabilization
AT01_RS07145	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AT01_RS07150	COG0776	regulation of translation
AT01_RS07155	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AT01_RS07160	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AT01_RS07170	COG0544	peptidyl-prolyl cis-trans isomerase activity
AT01_RS07175	COG0271	Belongs to the BolA IbaG family
AT01_RS07180	COG3056	Lipoprotein
AT01_RS07185	COG2223	nitrite transmembrane transporter activity
AT01_RS07195	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AT01_RS07200	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AT01_RS07205	COG1845	cytochrome c oxidase, subunit III
AT01_RS07210	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AT01_RS07215	COG0109	protoheme IX farnesyltransferase activity
AT01_RS07220	COG2814	Major facilitator Superfamily
AT01_RS07225	COG1666	GTP binding
AT01_RS07230	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AT01_RS07235	COG0693	protein deglycase activity
AT01_RS07240	COG0301	tRNA thio-modification
AT01_RS07240	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AT01_RS07250	COG0142	geranyltranstransferase activity
AT01_RS07255	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AT01_RS07260	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AT01_RS07265	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AT01_RS07275	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
AT01_RS07280	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AT01_RS07280	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AT01_RS07290	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AT01_RS07295	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AT01_RS07300	COG1862	Preprotein translocase
AT01_RS07305	COG0343	queuine tRNA-ribosyltransferase activity
AT01_RS07320	COG0450	alkyl hydroperoxide reductase
AT01_RS07340	COG0366	Alpha amylase catalytic
AT01_RS07360	COG5002	protein histidine kinase activity
AT01_RS07365	COG0745	RESPONSE REGULATOR receiver
AT01_RS07370	COG0420	3'-5' exonuclease activity
AT01_RS07375	COG0419	ATPase involved in DNA repair
AT01_RS07380	COG1940	carbohydrate kinase activity
AT01_RS07385	COG2974	May be involved in recombination
AT01_RS07395	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AT01_RS07415	COG2226	methyltransferase
AT01_RS07430	COG3459	Glycosyltransferase 36 associated
AT01_RS07460	COG1073	alpha beta
AT01_RS07465	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
AT01_RS07470	COG2195	Cleaves the N-terminal amino acid of tripeptides
AT01_RS07475	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AT01_RS07480	COG1181	Belongs to the D-alanine--D-alanine ligase family
AT01_RS07490	COG3328	transposase activity
AT01_RS07495	COG2991	Protein conserved in bacteria
AT01_RS07500	COG1477	protein flavinylation
AT01_RS07510	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AT01_RS07515	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AT01_RS07520	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AT01_RS07525	COG1805	sodium ion transport
AT01_RS07530	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AT01_RS07535	COG3034	peptidoglycan biosynthetic process
AT01_RS07540	COG0121	glutamine amidotransferase
AT01_RS07550	COG1960	acyl-CoA dehydrogenase activity
AT01_RS07555	COG3914	O-linked N-acetylglucosamine transferase SPINDLY family
AT01_RS07575	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
AT01_RS07580	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
AT01_RS07585	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
AT01_RS07590	COG4229	Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene)
AT01_RS07595	COG0235	Class ii aldolase
AT01_RS07600	COG0436	Aminotransferase
AT01_RS07610	COG2814	Major facilitator Superfamily
AT01_RS07615	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AT01_RS07625	COG1846	Transcriptional regulator
AT01_RS07630	COG1538	Outer membrane efflux protein
AT01_RS07635	COG1566	PFAM secretion protein HlyD family protein
AT01_RS07640	COG2814	Major facilitator Superfamily
AT01_RS07645	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT01_RS07650	COG3118	belongs to the thioredoxin family
AT01_RS07655	COG3148	PFAM DTW domain containing protein
AT01_RS07660	COG1042	CoA-binding domain protein
AT01_RS07660	COG0045	succinate-CoA ligase (ADP-forming) activity
AT01_RS07660	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AT01_RS07665	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AT01_RS07670	COG5544	Lipoprotein
AT01_RS07700	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AT01_RS07710	COG2011	ABC-type metal ion transport system permease component
AT01_RS07715	COG1464	Belongs to the NlpA lipoprotein family
AT01_RS07725	COG1720	tRNA m6t6A37 methyltransferase activity
AT01_RS07735	COG3015	lipoprotein NlpE involved in copper resistance
AT01_RS07755	COG4568	rho-dependent transcription termination
AT01_RS07770	COG0346	lactoylglutathione lyase activity
AT01_RS07775	COG1982	Orn Lys Arg decarboxylase major
AT01_RS07780	COG0825	malonyl-CoA metabolic process
AT01_RS07790	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AT01_RS07800	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT01_RS07810	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
AT01_RS07815	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AT01_RS07825	COG0750	zinc metalloprotease
AT01_RS07830	COG0575	Belongs to the CDS family
AT01_RS07840	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AT01_RS07845	COG0233	cytoplasmic translational termination
AT01_RS07850	COG0528	UMP kinase activity
AT01_RS07855	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AT01_RS07870	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
AT01_RS07875	COG2171	N-acyltransferase activity
AT01_RS07900	COG0564	pseudouridine synthase activity
AT01_RS07905	COG3098	single-species biofilm formation
AT01_RS07915	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AT01_RS07915	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
AT01_RS07920	COG1611	Belongs to the LOG family
AT01_RS07930	COG2933	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily
AT01_RS07935	COG2363	Small membrane protein
AT01_RS07940	COG0583	DNA-binding transcription factor activity
AT01_RS07950	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AT01_RS07955	COG2166	iron-sulfur cluster assembly
AT01_RS07960	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AT01_RS07965	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AT01_RS07985	COG0860	N-Acetylmuramoyl-L-alanine amidase
AT01_RS07990	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AT01_RS07990	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AT01_RS07995	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AT01_RS08000	COG1074	ATP-dependent DNA helicase activity
AT01_RS08005	COG1025	Belongs to the peptidase M16 family
AT01_RS08010	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AT01_RS08020	COG1139	Iron-sulfur cluster binding protein
AT01_RS08025	COG0247	lactate metabolic process
AT01_RS08030	COG1012	belongs to the aldehyde dehydrogenase family
AT01_RS08035	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AT01_RS08075	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AT01_RS08095	COG3066	DNA modification
AT01_RS08100	COG0861	Integral membrane protein TerC family
AT01_RS08105	COG0667	Aldo Keto reductase
AT01_RS08110	COG0477	Major facilitator Superfamily
AT01_RS08115	COG0204	Acyl-transferase
AT01_RS08115	COG0318	PFAM AMP-dependent synthetase and ligase
AT01_RS08120	COG1609	Transcriptional regulator
AT01_RS08125	COG1609	Transcriptional regulator
AT01_RS08135	COG0583	DNA-binding transcription factor activity
AT01_RS08140	COG2814	Major facilitator Superfamily
AT01_RS08180	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AT01_RS08210	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AT01_RS08230	COG0288	reversible hydration of carbon dioxide
AT01_RS08235	COG1733	regulation of RNA biosynthetic process
AT01_RS08240	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS08250	COG0484	heat shock protein binding
AT01_RS08255	COG1609	Transcriptional regulator
AT01_RS08260	COG2271	Major facilitator Superfamily
AT01_RS08275	COG1522	sequence-specific DNA binding
AT01_RS08280	COG3706	GGDEF domain
AT01_RS08355	COG0582	viral genome integration into host DNA
AT01_RS08370	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AT01_RS08375	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AT01_RS08380	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AT01_RS08385	COG4974	Belongs to the 'phage' integrase family
AT01_RS08390	COG0716	FMN binding
AT01_RS08395	COG4452	Inner membrane protein CreD
AT01_RS08400	COG2205	protein histidine kinase activity
AT01_RS08405	COG0745	RESPONSE REGULATOR receiver
AT01_RS08425	COG1272	protein, Hemolysin III
AT01_RS08430	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS08435	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AT01_RS08435	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
AT01_RS08440	COG0509	glycine decarboxylation via glycine cleavage system
AT01_RS08445	COG0404	The glycine cleavage system catalyzes the degradation of glycine
AT01_RS08450	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT01_RS08455	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT01_RS08460	COG0006	proline dipeptidase activity
AT01_RS08470	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
AT01_RS08475	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AT01_RS08480	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AT01_RS08485	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AT01_RS08490	COG0583	DNA-binding transcription factor activity
AT01_RS08500	COG1279	arginine transmembrane transporter activity
AT01_RS08510	COG0191	fructose-bisphosphate aldolase activity
AT01_RS08520	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AT01_RS08525	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AT01_RS08530	COG0501	Belongs to the peptidase M48B family
AT01_RS08540	COG1166	arginine decarboxylase activity
AT01_RS08545	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AT01_RS08560	COG0640	Transcriptional regulator
AT01_RS08565	COG3091	SprT-like family
AT01_RS08570	COG2356	endonuclease I
AT01_RS08575	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AT01_RS08580	COG0189	ligase activity
AT01_RS08585	COG1678	Uncharacterized ACR, COG1678
AT01_RS08590	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AT01_RS08595	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT01_RS08605	COG2805	Type II/IV secretion system protein
AT01_RS08610	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AT01_RS08615	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AT01_RS08620	COG0762	integral membrane protein
AT01_RS08625	COG1872	DUF167
AT01_RS08630	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AT01_RS08635	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT01_RS08650	COG3171	Protein conserved in bacteria
AT01_RS08660	COG1194	a g-specific adenine glycosylase
AT01_RS08665	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
AT01_RS08670	COG0741	lytic transglycosylase activity
AT01_RS08695	COG4974	Belongs to the 'phage' integrase family
AT01_RS08810	COG2015	COG2015, Alkyl sulfatase and related hydrolases
AT01_RS08885	COG4773	Receptor
AT01_RS08890	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AT01_RS08895	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS08900	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS08905	COG1120	ATPase activity
AT01_RS08910	COG4264	IucA IucC family
AT01_RS08920	COG3486	L-lysine 6-monooxygenase (NADPH) activity
AT01_RS08925	COG0076	glutamate decarboxylase activity
AT01_RS08930	COG4114	ferric iron reductase
AT01_RS08940	COG2963	transposase activity
AT01_RS08945	COG1487	ribonuclease activity
AT01_RS08970	COG0583	DNA-binding transcription factor activity
AT01_RS08975	COG3961	Belongs to the TPP enzyme family
AT01_RS08980	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT01_RS09130	COG2197	response regulator
AT01_RS09150	COG3209	COG3209 Rhs family protein
AT01_RS09160	COG3209	COG3209 Rhs family protein
AT01_RS09170	COG3501	Rhs element vgr protein
AT01_RS09255	COG0488	(ABC) transporter
AT01_RS09265	COG0477	Major facilitator Superfamily
AT01_RS09270	COG1609	Transcriptional regulator
AT01_RS09295	COG0477	Major facilitator Superfamily
AT01_RS09300	COG5001	Diguanylate cyclase
AT01_RS09310	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AT01_RS09315	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AT01_RS09320	COG0309	Hydrogenase expression formation protein (HypE)
AT01_RS09325	COG0409	Hydrogenase expression formation protein
AT01_RS09330	COG0298	carbon dioxide binding
AT01_RS09335	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AT01_RS09345	COG1773	rubredoxin
AT01_RS09350	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AT01_RS09355	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AT01_RS09360	COG5557	Pfam Polysulphide reductase, NrfD
AT01_RS09365	COG0437	4 iron, 4 sulfur cluster binding
AT01_RS09370	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AT01_RS09395	COG4592	Periplasmic binding protein
AT01_RS09400	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS09405	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS09410	COG1120	ATPase activity
AT01_RS09420	COG4774	siderophore transport
AT01_RS09445	COG4964	Belongs to the GSP D family
AT01_RS09495	COG0848	biopolymer transport protein
AT01_RS09505	COG0626	cystathionine gamma-synthase activity
AT01_RS09510	COG0586	Pfam SNARE associated Golgi protein
AT01_RS09515	COG2207	Transcriptional regulator
AT01_RS09525	COG1979	alcohol dehydrogenase
AT01_RS09530	COG0656	L-ascorbic acid biosynthetic process
AT01_RS09545	COG2132	Multicopper oxidase
AT01_RS09550	COG0204	Acyl-transferase
AT01_RS09560	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT01_RS09565	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AT01_RS09580	COG3150	esterase
AT01_RS09585	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AT01_RS09590	COG3151	Protein conserved in bacteria
AT01_RS09595	COG0494	nUDIX hydrolase
AT01_RS09605	COG5463	Belongs to the UPF0441 family
AT01_RS09610	COG0754	glutathionylspermidine amidase activity
AT01_RS09615	COG3384	dioxygenase
AT01_RS09620	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AT01_RS09630	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
AT01_RS09630	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
AT01_RS09635	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
AT01_RS09640	COG3025	triphosphatase activity
AT01_RS09645	COG4991	sh3 domain protein
AT01_RS09650	COG0617	tRNA 3'-terminal CCA addition
AT01_RS09660	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AT01_RS09665	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
AT01_RS09670	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AT01_RS09675	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AT01_RS09680	COG0358	DNA primase activity
AT01_RS09710	COG3247	response to pH
AT01_RS09715	COG0446	pyridine nucleotide-disulphide oxidoreductase
AT01_RS09715	COG1902	pentaerythritol trinitrate reductase activity
AT01_RS09720	COG2813	Specifically methylates the guanine in position
AT01_RS09730	COG1451	nucleotide metabolic process
AT01_RS09735	COG0673	inositol 2-dehydrogenase activity
AT01_RS09740	COG0861	Integral membrane protein TerC family
AT01_RS09745	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
AT01_RS09755	COG2721	sulfolactate sulfo-lyase activity
AT01_RS09765	COG1904	glucuronate isomerase
AT01_RS09770	COG2271	Major facilitator Superfamily
AT01_RS09785	COG0586	Pfam SNARE associated Golgi protein
AT01_RS09800	COG4575	ribosome binding
AT01_RS09805	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AT01_RS09815	COG2259	Doxx family
AT01_RS09820	COG0435	Glutathione S-transferase
AT01_RS09825	COG0583	DNA-binding transcription factor activity
AT01_RS09830	COG1741	Belongs to the pirin family
AT01_RS09835	COG0667	Aldo Keto reductase
AT01_RS09870	COG3328	transposase activity
AT01_RS09880	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AT01_RS09890	COG0792	nuclease activity
AT01_RS09895	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
AT01_RS09900	COG2823	Periplasmic or secreted lipoprotein
AT01_RS09905	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT01_RS09910	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AT01_RS09915	COG2198	Histidine kinase
AT01_RS09915	COG5002	protein histidine kinase activity
AT01_RS09915	COG0784	Response regulator, receiver
AT01_RS09920	COG1242	4 iron, 4 sulfur cluster binding
AT01_RS09925	COG0070	glutamate synthase
AT01_RS09925	COG0069	glutamate synthase activity
AT01_RS09925	COG0067	glutamate synthase
AT01_RS09930	COG0493	'glutamate synthase
AT01_RS09940	COG2969	positive regulation of protein catabolic process
AT01_RS09945	COG0625	glutathione transferase activity
AT01_RS09950	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
AT01_RS09955	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AT01_RS09960	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AT01_RS09965	COG3105	Protein conserved in bacteria
AT01_RS09970	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT01_RS09975	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT01_RS09980	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AT01_RS09985	COG5007	Belongs to the BolA IbaG family
AT01_RS09990	COG3113	response to antibiotic
AT01_RS09995	COG2854	intermembrane phospholipid transfer
AT01_RS10000	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AT01_RS10005	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AT01_RS10010	COG1127	ABC transporter
AT01_RS10015	COG0530	calcium, potassium:sodium antiporter activity
AT01_RS10020	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AT01_RS10020	COG0517	IMP dehydrogenase activity
AT01_RS10025	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AT01_RS10030	COG3117	lipopolysaccharide transmembrane transporter activity
AT01_RS10035	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AT01_RS10040	COG1137	ATPase activity
AT01_RS10045	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
AT01_RS10065	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS10070	COG0540	Belongs to the ATCase OTCase family
AT01_RS10075	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
AT01_RS10085	COG0366	Alpha amylase catalytic
AT01_RS10090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT01_RS10090	COG1263	PTS System
AT01_RS10095	COG1609	Transcriptional regulator
AT01_RS10100	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AT01_RS10110	COG3711	transcriptional antiterminator
AT01_RS10110	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS10135	COG3964	amidohydrolase
AT01_RS10165	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT01_RS10170	COG3783	Cytochrome b(562)
AT01_RS10175	COG0312	modulator of DNA gyrase
AT01_RS10180	COG3028	Belongs to the UPF0307 family
AT01_RS10185	COG2732	(Barnase) inhibitor
AT01_RS10200	COG1289	transmembrane transporter activity
AT01_RS10205	COG1566	PFAM secretion protein HlyD family protein
AT01_RS10215	COG0583	DNA-binding transcription factor activity
AT01_RS10220	COG0312	modulator of DNA gyrase
AT01_RS10225	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT01_RS10230	COG3164	Protein of unknown function
AT01_RS10235	COG1530	ribonuclease E activity
AT01_RS10240	COG0424	maF-like protein
AT01_RS10245	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AT01_RS10250	COG1792	Involved in formation and maintenance of cell shape
AT01_RS10255	COG1077	Cell shape determining protein MreB Mrl
AT01_RS10260	COG2199	diguanylate cyclase activity
AT01_RS10260	COG2200	EAL domain
AT01_RS10265	COG0604	alcohol dehydrogenase
AT01_RS10275	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
AT01_RS10285	COG0511	ligase activity, forming carbon-carbon bonds
AT01_RS10290	COG0439	Biotin carboxylase
AT01_RS10295	COG3924	membrane
AT01_RS10300	COG4145	pantothenate transmembrane transporter activity
AT01_RS10305	COG2264	protein methyltransferase activity
AT01_RS10310	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT01_RS10315	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
AT01_RS10325	COG3133	Outer membrane lipoprotein
AT01_RS10330	COG1278	Cold shock
AT01_RS10335	COG1278	Cold shock
AT01_RS10345	COG1069	ribulokinase activity
AT01_RS10355	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS10360	COG1129	ABC transporter
AT01_RS10370	COG1560	Kdo2-lipid A biosynthetic process
AT01_RS10390	COG1380	Effector of murein hydrolase LrgA
AT01_RS10395	COG0583	DNA-binding transcription factor activity
AT01_RS10400	COG0025	NhaP-type Na H and K H
AT01_RS10405	COG2252	PERMEase
AT01_RS10420	COG3550	peptidyl-serine autophosphorylation
AT01_RS10430	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
AT01_RS10435	COG2315	Protein conserved in bacteria
AT01_RS10440	COG1448	Aminotransferase
AT01_RS10470	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT01_RS10480	COG0735	belongs to the Fur family
AT01_RS10485	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AT01_RS10490	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AT01_RS10495	COG2937	Belongs to the GPAT DAPAT family
AT01_RS10505	COG3161	chorismate lyase activity
AT01_RS10515	COG4580	involved in the transport of maltose and maltodextrins
AT01_RS10525	COG2182	Extracellular solute-binding protein
AT01_RS10530	COG1175	transmembrane transport
AT01_RS10535	COG3833	ABC-type maltose transport systems, permease component
AT01_RS10540	COG3223	Belongs to the PsiE family
AT01_RS10545	COG0166	Belongs to the GPI family
AT01_RS10550	COG0527	aspartate kinase activity
AT01_RS10565	COG1414	Transcriptional regulator
AT01_RS10570	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
AT01_RS10575	COG2224	Isocitrate lyase
AT01_RS10580	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AT01_RS10625	COG0138	bifunctional purine biosynthesis protein purh
AT01_RS10630	COG0151	Belongs to the GarS family
AT01_RS10650	COG1515	deoxyribonuclease V activity
AT01_RS10655	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
AT01_RS10660	COG2816	NAD+ diphosphatase activity
AT01_RS10665	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AT01_RS10680	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AT01_RS10690	COG2022	thiamine diphosphate biosynthetic process
AT01_RS10700	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AT01_RS10705	COG0085	RNA polymerase activity
AT01_RS10710	COG0222	ribosome binding
AT01_RS10725	COG0081	regulation of translation
AT01_RS10730	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AT01_RS10735	COG0250	Participates in transcription elongation, termination and antitermination
AT01_RS10745	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AT01_RS10775	COG1072	(Pantothenic acid kinase))
AT01_RS10780	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
AT01_RS10780	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
AT01_RS10820	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
AT01_RS10825	COG1739	Uncharacterized protein family UPF0029
AT01_RS10835	COG1250	3-hydroxyacyl-CoA dehydrogenase
AT01_RS10835	COG1024	Enoyl-CoA hydratase
AT01_RS10840	COG0183	Belongs to the thiolase family
AT01_RS10850	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AT01_RS10870	COG0805	protein transport
AT01_RS10880	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AT01_RS10885	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
AT01_RS10895	COG2226	methyltransferase
AT01_RS10900	COG1322	Protein conserved in bacteria
AT01_RS10905	COG0586	Pfam SNARE associated Golgi protein
AT01_RS10910	COG1966	Carbon starvation protein
AT01_RS10925	COG0412	Dienelactone hydrolase
AT01_RS10930	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AT01_RS10935	COG0583	DNA-binding transcription factor activity
AT01_RS10945	COG0679	Auxin Efflux Carrier
AT01_RS10950	COG0584	glycerophosphoryl diester phosphodiesterase
AT01_RS10955	COG3842	ATPase activity
AT01_RS10960	COG0395	ABC-type sugar transport system, permease component
AT01_RS10965	COG1175	transmembrane transport
AT01_RS10970	COG1653	transport
AT01_RS11010	COG0410	ABC transporter
AT01_RS11020	COG4177	L-phenylalanine transmembrane transporter activity
AT01_RS11040	COG3328	transposase activity
AT01_RS11050	COG2177	Part of the ABC transporter FtsEX involved in
AT01_RS11055	COG2884	Cell division ATP-binding protein ftsE
AT01_RS11060	COG0552	protein localization to endoplasmic reticulum
AT01_RS11065	COG0742	ribosomal rna small subunit methyltransferase
AT01_RS11070	COG3776	membrane
AT01_RS11085	COG3714	YhhN family
AT01_RS11095	COG0425	Belongs to the sulfur carrier protein TusA family
AT01_RS11100	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AT01_RS11110	COG0247	lactate metabolic process
AT01_RS11120	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AT01_RS11125	COG2271	Major facilitator Superfamily
AT01_RS11130	COG0584	glycerophosphoryl diester phosphodiesterase
AT01_RS11135	COG0561	phosphatase activity
AT01_RS11140	COG2267	carboxylic ester hydrolase activity
AT01_RS11150	COG1280	lysine exporter protein (LysE YggA)
AT01_RS11160	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
AT01_RS11165	COG2050	protein possibly involved in aromatic compounds catabolism
AT01_RS11185	COG5564	TIM-barrel signal transduction protein
AT01_RS11190	COG5441	Belongs to the UPF0261 family
AT01_RS11200	COG0210	DNA helicase
AT01_RS11205	COG1011	Hydrolase
AT01_RS11210	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
AT01_RS11215	COG3159	Protein conserved in bacteria
AT01_RS11220	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AT01_RS11225	COG5567	small periplasmic lipoprotein
AT01_RS11235	COG3072	Adenylate cyclase
AT01_RS11240	COG0181	hydroxymethylbilane synthase activity
AT01_RS11245	COG1587	Uroporphyrinogen-III synthase
AT01_RS11250	COG2959	enzyme of heme biosynthesis
AT01_RS11255	COG3071	HemY protein
AT01_RS11295	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AT01_RS11300	COG2244	polysaccharide biosynthetic process
AT01_RS11305	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AT01_RS11310	COG0456	acetyltransferase
AT01_RS11315	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AT01_RS11320	COG1088	dTDP-glucose 4,6-dehydratase activity
AT01_RS11325	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AT01_RS11330	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
AT01_RS11335	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AT01_RS11340	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT01_RS11345	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AT01_RS11350	COG3118	belongs to the thioredoxin family
AT01_RS11360	COG0248	Ppx GppA phosphatase
AT01_RS11370	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AT01_RS11380	COG3121	Chaperone
AT01_RS11395	COG3121	Chaperone
AT01_RS11400	COG4104	PAAR repeat-containing protein
AT01_RS11415	COG0583	DNA-binding transcription factor activity
AT01_RS11425	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT01_RS11430	COG0129	dihydroxy-acid dehydratase activity
AT01_RS11435	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AT01_RS11440	COG3978	acetolactate synthase activity
AT01_RS11455	COG3085	chromosome segregation
AT01_RS11460	COG0583	DNA-binding transcription factor activity
AT01_RS11465	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS11470	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS11475	COG1129	ABC transporter
AT01_RS11480	COG1879	ABC-type sugar transport system periplasmic component
AT01_RS11520	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
AT01_RS11530	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AT01_RS11545	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT01_RS11555	COG0678	peroxiredoxin activity
AT01_RS11555	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AT01_RS11560	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT01_RS11610	COG0165	Argininosuccinate lyase
AT01_RS11615	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AT01_RS11630	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
AT01_RS11660	COG0527	aspartate kinase activity
AT01_RS11660	COG0460	homoserine dehydrogenase
AT01_RS11665	COG0626	cystathionine gamma-synthase activity
AT01_RS11670	COG3060	This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis
AT01_RS11680	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AT01_RS11685	COG1609	Transcriptional regulator
AT01_RS11690	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AT01_RS11695	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
AT01_RS11700	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
AT01_RS11705	COG1575	Belongs to the MenA family. Type 1 subfamily
AT01_RS11715	COG3074	FtsZ-dependent cytokinesis
AT01_RS11720	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AT01_RS11725	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AT01_RS11730	COG1494	fructose-1,6-bisphosphatase
AT01_RS11735	COG2814	Major facilitator Superfamily
AT01_RS11745	COG3152	Membrane
AT01_RS11760	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AT01_RS11770	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AT01_RS11775	COG3678	ATP-independent chaperone mediated protein folding
AT01_RS11780	COG0745	RESPONSE REGULATOR receiver
AT01_RS11785	COG2205	protein histidine kinase activity
AT01_RS11790	COG2169	Transcriptional regulator
AT01_RS11790	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AT01_RS11795	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AT01_RS11800	COG1045	serine acetyltransferase
AT01_RS11805	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
AT01_RS11810	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
AT01_RS11815	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AT01_RS11820	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AT01_RS11825	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AT01_RS11830	COG4942	peptidase
AT01_RS11835	COG2861	carbohydrate metabolic process
AT01_RS11840	COG1063	alcohol dehydrogenase
AT01_RS11845	COG0156	8-amino-7-oxononanoate synthase activity
AT01_RS11850	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT01_RS11860	COG0859	PFAM glycosyl transferase family 9
AT01_RS11865	COG1519	Transferase
AT01_RS11875	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AT01_RS11880	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
AT01_RS11885	COG0267	Belongs to the bacterial ribosomal protein bL33 family
AT01_RS11890	COG0227	Belongs to the bacterial ribosomal protein bL28 family
AT01_RS11895	COG2003	Belongs to the UPF0758 family
AT01_RS11900	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AT01_RS11905	COG0756	dUTP diphosphatase activity
AT01_RS11910	COG1309	transcriptional regulator
AT01_RS11915	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AT01_RS11920	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
AT01_RS11925	COG1561	YicC-like family, N-terminal region
AT01_RS11930	COG5001	Diguanylate cyclase
AT01_RS11935	COG1024	Enoyl-CoA hydratase
AT01_RS11940	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AT01_RS11950	COG2860	membrane
AT01_RS11955	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AT01_RS11965	COG1758	RNA polymerase activity
AT01_RS11970	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AT01_RS11975	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT01_RS11980	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AT01_RS11985	COG0786	glutamate:sodium symporter activity
AT01_RS11990	COG2233	PERMEase
AT01_RS11995	COG2982	Protein involved in outer membrane biogenesis
AT01_RS12040	COG0456	acetyltransferase
AT01_RS12050	COG1295	ribonuclease BN
AT01_RS12055	COG1011	Hydrolase
AT01_RS12070	COG0174	glutamine synthetase
AT01_RS12075	COG3852	Histidine kinase
AT01_RS12085	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AT01_RS12105	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AT01_RS12105	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AT01_RS12110	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AT01_RS12115	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
AT01_RS12120	COG3084	Protein conserved in bacteria
AT01_RS12130	COG1763	Mo-molybdopterin cofactor biosynthetic process
AT01_RS12155	COG2186	Transcriptional regulator
AT01_RS12160	COG0477	Major facilitator Superfamily
AT01_RS12165	COG1609	Transcriptional regulator
AT01_RS12170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT01_RS12175	COG1879	ABC-type sugar transport system periplasmic component
AT01_RS12180	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS12190	COG1869	D-ribose catabolic process
AT01_RS12195	COG3158	transport of potassium into the cell
AT01_RS12200	COG0714	Associated with various cellular activities
AT01_RS12205	COG2425	protein containing a von Willebrand factor type A (vWA) domain
AT01_RS12215	COG2502	aspartate--ammonia ligase
AT01_RS12220	COG1522	sequence-specific DNA binding
AT01_RS12225	COG0716	FMN binding
AT01_RS12230	COG0445	tRNA wobble uridine modification
AT01_RS12235	COG0357	Ribosomal RNA small subunit methyltransferase G
AT01_RS12240	COG3312	ion transport
AT01_RS12245	COG0356	it plays a direct role in the translocation of protons across the membrane
AT01_RS12255	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AT01_RS12260	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AT01_RS12265	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AT01_RS12275	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AT01_RS12280	COG0355	proton-transporting ATP synthase activity, rotational mechanism
AT01_RS12285	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AT01_RS12300	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AT01_RS12305	COG0573	inorganic phosphate transmembrane transporter activity
AT01_RS12310	COG0581	inorganic phosphate transmembrane transporter activity
AT01_RS12320	COG0704	Plays a role in the regulation of phosphate uptake
AT01_RS12325	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS12330	COG0765	amino acid transport
AT01_RS12335	COG0765	amino acid transport
AT01_RS12340	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT01_RS12345	COG2252	PERMEase
AT01_RS12360	COG4191	Histidine kinase
AT01_RS12365	COG0840	transmembrane signaling receptor activity
AT01_RS12370	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AT01_RS12375	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AT01_RS12380	COG0706	membrane insertase activity
AT01_RS12390	COG0594	ribonuclease P activity
AT01_RS12395	COG0230	Belongs to the bacterial ribosomal protein bL34 family
AT01_RS12405	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AT01_RS12410	COG0592	DNA-directed DNA polymerase activity
AT01_RS12420	COG0187	DNA topoisomerase II activity
AT01_RS12425	COG0561	phosphatase activity
AT01_RS12430	COG2423	ornithine cyclodeaminase activity
AT01_RS12435	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
AT01_RS12440	COG0823	Involved in the tonB-independent uptake of proteins
AT01_RS12445	COG5645	(Lipo)protein
AT01_RS12460	COG2985	domain, Protein
AT01_RS12460	COG0569	domain protein
AT01_RS12465	COG3977	Valine--pyruvate aminotransferase
AT01_RS12485	COG2885	chlorophyll binding
AT01_RS12505	COG2818	Glycosylase
AT01_RS12510	COG0752	glycyl-tRNA synthetase alpha subunit
AT01_RS12515	COG0751	glycine-tRNA ligase activity
AT01_RS12530	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS12530	COG2213	PTS system mannitol-specific
AT01_RS12535	COG0246	Mannitol dehydrogenase
AT01_RS12540	COG3722	fumarate hydratase activity
AT01_RS12550	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT01_RS12570	COG2258	MOSC domain
AT01_RS12575	COG0840	transmembrane signaling receptor activity
AT01_RS12580	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AT01_RS12585	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
AT01_RS12590	COG0243	molybdopterin cofactor binding
AT01_RS12590	COG3383	formate dehydrogenase (NAD+) activity
AT01_RS12595	COG0243	molybdopterin cofactor binding
AT01_RS12595	COG3383	formate dehydrogenase (NAD+) activity
AT01_RS12600	COG0437	4 iron, 4 sulfur cluster binding
AT01_RS12605	COG2864	formate dehydrogenase
AT01_RS12610	COG3058	Necessary for formate dehydrogenase activity
AT01_RS12615	COG1921	L-seryl-tRNASec selenium transferase activity
AT01_RS12620	COG3276	selenocysteine insertion sequence binding
AT01_RS12630	COG3550	peptidyl-serine autophosphorylation
AT01_RS12640	COG3274	enterobacterial common antigen metabolic process
AT01_RS12650	COG2814	Major facilitator Superfamily
AT01_RS12660	COG3121	Chaperone
AT01_RS12665	COG1070	Carbohydrate kinase
AT01_RS12670	COG2115	Belongs to the xylose isomerase family
AT01_RS12675	COG4213	ABC transporter substrate-binding protein
AT01_RS12685	COG4214	carbohydrate transport
AT01_RS12690	COG1609	Transcriptional regulator
AT01_RS12690	COG2207	Transcriptional regulator
AT01_RS12695	COG0582	viral genome integration into host DNA
AT01_RS12750	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
AT01_RS12755	COG2986	histidine ammonia-lyase
AT01_RS12770	COG1764	response to oxidative stress
AT01_RS12775	COG2194	sulfuric ester hydrolase activity
AT01_RS12780	COG2197	response regulator
AT01_RS12790	COG2271	Major facilitator Superfamily
AT01_RS12800	COG0747	negative chemotaxis
AT01_RS12805	COG0601	transmembrane transport
AT01_RS12810	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT01_RS12815	COG0444	Belongs to the ABC transporter superfamily
AT01_RS12820	COG4608	Belongs to the ABC transporter superfamily
AT01_RS12825	COG2194	sulfuric ester hydrolase activity
AT01_RS12845	COG1192	Involved in chromosome partitioning
AT01_RS12850	COG1215	transferase activity, transferring glycosyl groups
AT01_RS12855	COG1215	transferase activity, transferring glycosyl groups
AT01_RS12860	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AT01_RS12865	COG3118	belongs to the thioredoxin family
AT01_RS12865	COG0457	Tetratricopeptide repeat
AT01_RS12870	COG2200	EAL domain
AT01_RS12870	COG2199	diguanylate cyclase activity
AT01_RS12875	COG1301	dicarboxylic acid transport
AT01_RS12880	COG0612	Peptidase, M16
AT01_RS12885	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT01_RS12890	COG1942	4-Oxalocrotonate Tautomerase
AT01_RS12895	COG2200	EAL domain
AT01_RS12900	COG2982	Protein involved in outer membrane biogenesis
AT01_RS12905	COG2134	cdp-diacylglycerol pyrophosphatase
AT01_RS12910	COG1295	ribonuclease BN
AT01_RS12920	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT01_RS12925	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AT01_RS12935	COG0742	ribosomal rna small subunit methyltransferase
AT01_RS12955	COG0589	response to stress
AT01_RS12965	COG0306	phosphate transporter
AT01_RS12970	COG2081	HI0933 family
AT01_RS12990	COG3718	enzyme involved in inositol metabolism
AT01_RS13000	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AT01_RS13005	COG3962	Belongs to the TPP enzyme family
AT01_RS13010	COG0673	inositol 2-dehydrogenase activity
AT01_RS13015	COG1082	Xylose isomerase domain protein TIM barrel
AT01_RS13020	COG1082	Xylose isomerase domain protein TIM barrel
AT01_RS13025	COG1247	-acetyltransferase
AT01_RS13030	COG1741	Belongs to the pirin family
AT01_RS13035	COG1609	Transcriptional regulator
AT01_RS13040	COG2610	gluconate transmembrane transporter activity
AT01_RS13045	COG3265	gluconokinase activity
AT01_RS13050	COG2095	MarC family integral membrane protein
AT01_RS13055	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AT01_RS13100	COG3275	phosphorelay sensor kinase activity
AT01_RS13105	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
AT01_RS13110	COG1523	belongs to the glycosyl hydrolase 13 family
AT01_RS13115	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
AT01_RS13120	COG0297	glycogen (starch) synthase activity
AT01_RS13125	COG0058	SHG alpha-glucan phosphorylase activity
AT01_RS13130	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AT01_RS13135	COG1349	DNA-binding transcription factor activity
AT01_RS13140	COG0705	Rhomboid family
AT01_RS13155	COG2909	trisaccharide binding
AT01_RS13160	COG0058	SHG alpha-glucan phosphorylase activity
AT01_RS13170	COG0316	Belongs to the HesB IscA family
AT01_RS13170	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
AT01_RS13180	COG0596	Alpha beta hydrolase
AT01_RS13200	COG1918	ferrous iron import across plasma membrane
AT01_RS13205	COG2183	response to ionizing radiation
AT01_RS13220	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AT01_RS13235	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
AT01_RS13245	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AT01_RS13250	COG1011	Hydrolase
AT01_RS13260	COG0494	nUDIX hydrolase
AT01_RS13265	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AT01_RS13290	COG4796	Type ii and iii secretion system protein
AT01_RS13295	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
AT01_RS13315	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AT01_RS13325	COG0180	Tryptophanyl-tRNA synthetase
AT01_RS13330	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT01_RS13330	COG1648	precorrin-2 dehydrogenase activity
AT01_RS13345	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT01_RS13350	COG0402	S-adenosylhomocysteine deaminase activity
AT01_RS13355	COG0738	Major facilitator superfamily
AT01_RS13375	COG1486	melibiose metabolic process
AT01_RS13380	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AT01_RS13385	COG0433	COG0433 Predicted ATPase
AT01_RS13405	COG1765	OsmC-like protein
AT01_RS13410	COG3954	Phosphoribulokinase
AT01_RS13420	COG0429	hydrolase of the alpha beta-hydrolase fold
AT01_RS13440	COG1216	Glycosyl transferase, family 2
AT01_RS13445	COG0488	(ABC) transporter
AT01_RS13450	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT01_RS13460	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AT01_RS13465	COG1047	Peptidyl-prolyl cis-trans
AT01_RS13475	COG0545	Peptidyl-prolyl cis-trans isomerase
AT01_RS13480	COG2964	Protein conserved in bacteria
AT01_RS13485	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AT01_RS13495	COG2168	tRNA wobble position uridine thiolation
AT01_RS13500	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AT01_RS13505	COG0049	tRNA binding
AT01_RS13515	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AT01_RS13530	COG0051	transcription antitermination factor activity, RNA binding
AT01_RS13545	COG0089	rRNA binding
AT01_RS13550	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AT01_RS13555	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AT01_RS13560	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AT01_RS13565	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AT01_RS13570	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AT01_RS13575	COG0255	Belongs to the universal ribosomal protein uL29 family
AT01_RS13580	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AT01_RS13585	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AT01_RS13600	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AT01_RS13610	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AT01_RS13625	COG1841	ribosomal large subunit assembly
AT01_RS13630	COG0200	Binds to the 23S rRNA
AT01_RS13635	COG0201	protein transport
AT01_RS13640	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AT01_RS13645	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AT01_RS13650	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AT01_RS13655	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AT01_RS13665	COG0203	ribosomal protein L17
AT01_RS13675	COG0789	Transcriptional regulator
AT01_RS13680	COG3036	rescue of stalled ribosome
AT01_RS13685	COG1970	mechanosensitive ion channel activity
AT01_RS13695	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AT01_RS13695	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AT01_RS13700	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AT01_RS13705	COG0242	peptide deformylase activity
AT01_RS13710	COG0758	DNA mediated transformation
AT01_RS13835	COG4695	Portal protein
AT01_RS13910	COG4974	Belongs to the 'phage' integrase family
AT01_RS13920	COG0551	DNA topoisomerase type I activity
AT01_RS13925	COG0009	L-threonylcarbamoyladenylate synthase
AT01_RS13930	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
AT01_RS13935	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AT01_RS13960	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AT01_RS13965	COG3162	membrane
AT01_RS13970	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
AT01_RS13975	COG1301	dicarboxylic acid transport
AT01_RS13995	COG0425	Belongs to the sulfur carrier protein TusA family
AT01_RS14000	COG1511	domain protein
AT01_RS14000	COG3264	Mechanosensitive ion channel
AT01_RS14010	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AT01_RS14015	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
AT01_RS14020	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS14025	COG4558	Periplasmic binding protein
AT01_RS14030	COG3720	iron ion transport
AT01_RS14035	COG4771	TonB-dependent receptor
AT01_RS14060	COG4607	ABC-type enterochelin transport system periplasmic component
AT01_RS14070	COG4605	iron ion homeostasis
AT01_RS14075	COG4604	ABC transporter, ATP-binding protein
AT01_RS14080	COG3443	Belongs to the bacterial solute-binding protein 9 family
AT01_RS14090	COG0814	amino acid
AT01_RS14095	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AT01_RS14100	COG1882	Formate acetyltransferase
AT01_RS14130	COG3539	Fimbrial protein
AT01_RS14140	COG3121	Chaperone
AT01_RS14165	COG1309	transcriptional regulator
AT01_RS14175	COG1929	Belongs to the glycerate kinase type-1 family
AT01_RS14180	COG4232	protein-disulfide reductase activity
AT01_RS14190	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AT01_RS14205	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AT01_RS14225	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AT01_RS14245	COG3080	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
AT01_RS14250	COG3029	Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane
AT01_RS14255	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AT01_RS14260	COG1053	succinate dehydrogenase
AT01_RS14270	COG3264	Mechanosensitive ion channel
AT01_RS14270	COG1511	domain protein
AT01_RS14280	COG1162	GTPase activity
AT01_RS14285	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
AT01_RS14305	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AT01_RS14310	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AT01_RS14310	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AT01_RS14315	COG0802	atpase or kinase
AT01_RS14320	COG0860	N-Acetylmuramoyl-L-alanine amidase
AT01_RS14325	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AT01_RS14330	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AT01_RS14335	COG1923	regulation of RNA biosynthetic process
AT01_RS14340	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AT01_RS14345	COG0330	HflC and HflK could
AT01_RS14350	COG0330	HflC and HflK could
AT01_RS14355	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AT01_RS14360	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AT01_RS14365	COG1959	2 iron, 2 sulfur cluster binding
AT01_RS14370	COG0557	exoribonuclease II activity
AT01_RS14375	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AT01_RS14380	COG1960	acyl-CoA dehydrogenase activity
AT01_RS14385	COG3650	response to hydrogen peroxide
AT01_RS14390	COG1073	alpha beta
AT01_RS14395	COG0360	Binds together with S18 to 16S ribosomal RNA
AT01_RS14405	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AT01_RS14410	COG0359	binds to the 23S rRNA
AT01_RS14420	COG3061	Opacity-associated protein A
AT01_RS14425	COG0545	Peptidyl-prolyl cis-trans isomerase
AT01_RS14435	COG0737	Belongs to the 5'-nucleotidase family
AT01_RS14440	COG1218	3'(2'),5'-bisphosphate nucleotidase
AT01_RS14445	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AT01_RS14460	COG1253	flavin adenine dinucleotide binding
AT01_RS14465	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AT01_RS14470	COG0729	surface antigen
AT01_RS14475	COG2911	Protein conserved in bacteria
AT01_RS14480	COG2105	PFAM AIG2 family protein
AT01_RS14485	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
AT01_RS14495	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AT01_RS14515	COG3423	Transcriptional regulator
AT01_RS14530	COG0142	geranyltranstransferase activity
AT01_RS14535	COG0261	This protein binds to 23S rRNA in the presence of protein L20
AT01_RS14540	COG0211	Belongs to the bacterial ribosomal protein bL27 family
AT01_RS14545	COG0697	spore germination
AT01_RS14550	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AT01_RS14555	COG0642	Histidine kinase
AT01_RS14560	COG0745	RESPONSE REGULATOR receiver
AT01_RS14565	COG2027	D-alanyl-D-alanine carboxypeptidase
AT01_RS14575	COG1534	Rna-binding protein
AT01_RS14580	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
AT01_RS14590	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AT01_RS14600	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AT01_RS14620	COG0195	Participates in both transcription termination and antitermination
AT01_RS14630	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AT01_RS14635	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AT01_RS14645	COG1185	polyribonucleotide nucleotidyltransferase activity
AT01_RS14655	COG0513	Belongs to the DEAD box helicase family
AT01_RS14660	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AT01_RS14670	COG0826	peptidase U32
AT01_RS14675	COG0826	peptidase U32
AT01_RS14680	COG3154	lipid carrier protein
AT01_RS14685	COG3153	acetyltransferase
AT01_RS14690	COG2827	Endonuclease containing a URI domain
AT01_RS14695	COG0531	amino acid
AT01_RS14700	COG1982	Orn Lys Arg decarboxylase major
AT01_RS14705	COG3787	Belongs to the UPF0306 family
AT01_RS14710	COG0702	epimerase
AT01_RS14715	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AT01_RS14720	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AT01_RS14725	COG3454	Phosphonate metabolism
AT01_RS14730	COG4778	phosphonate C-P lyase system protein PhnL
AT01_RS14735	COG4107	phosphonate C-P lyase system protein PhnK
AT01_RS14740	COG3627	carbon phosphorus lyase activity
AT01_RS14745	COG3626	phosphonate metabolism
AT01_RS14750	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AT01_RS14755	COG3624	Phosphonate C-P lyase system protein PhnG
AT01_RS14760	COG2188	Transcriptional regulator
AT01_RS14775	COG0583	DNA-binding transcription factor activity
AT01_RS14780	COG2249	NAD(P)H dehydrogenase (quinone) activity
AT01_RS14795	COG4608	Belongs to the ABC transporter superfamily
AT01_RS14800	COG0444	Belongs to the ABC transporter superfamily
AT01_RS14805	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT01_RS14810	COG0601	transmembrane transport
AT01_RS14820	COG2731	YhcH YjgK YiaL family protein
AT01_RS14830	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
AT01_RS14845	COG2927	DNA polymerase III (CHI subunit)
AT01_RS14850	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AT01_RS14855	COG0795	lipopolysaccharide-transporting ATPase activity
AT01_RS14860	COG0795	lipopolysaccharide-transporting ATPase activity
AT01_RS14875	COG3077	Addiction module antitoxin, RelB DinJ family
AT01_RS14890	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AT01_RS14915	COG3210	domain, Protein
AT01_RS14920	COG2831	hemolysin activation secretion protein
AT01_RS14935	COG0583	DNA-binding transcription factor activity
AT01_RS14970	COG3272	Protein of unknown function (DUF1722)
AT01_RS14975	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AT01_RS14980	COG1830	Aldolase
AT01_RS14985	COG1879	ABC-type sugar transport system periplasmic component
AT01_RS14990	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS14995	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS15000	COG1129	ABC transporter
AT01_RS15005	COG2390	Transcriptional regulator
AT01_RS15010	COG1070	Carbohydrate kinase
AT01_RS15015	COG0859	PFAM glycosyl transferase family 9
AT01_RS15035	COG2235	arginine
AT01_RS15045	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT01_RS15050	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT01_RS15075	COG2376	Dihydroxyacetone kinase
AT01_RS15080	COG1461	Dihydroxyacetone kinase
AT01_RS15085	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
AT01_RS15085	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS15085	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AT01_RS15095	COG2192	nodulation
AT01_RS15120	COG3284	Transcriptional regulator
AT01_RS15185	COG0667	Aldo Keto reductase
AT01_RS15195	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AT01_RS15200	COG0456	acetyltransferase
AT01_RS15205	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AT01_RS15210	COG2823	Periplasmic or secreted lipoprotein
AT01_RS15215	COG4667	esterase of the alpha-beta hydrolase superfamily
AT01_RS15220	COG0084	hydrolase, TatD family'
AT01_RS15225	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AT01_RS15240	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AT01_RS15245	COG0813	purine-nucleoside phosphorylase activity
AT01_RS15250	COG3726	membrane protein affecting hemolysin expression
AT01_RS15255	COG0560	Phosphoserine phosphatase
AT01_RS15275	COG1454	alcohol dehydrogenase
AT01_RS15310	COG0488	(ABC) transporter
AT01_RS15315	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AT01_RS15320	COG0741	lytic transglycosylase activity
AT01_RS15325	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
AT01_RS15330	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
AT01_RS15340	COG2207	Transcriptional regulator
AT01_RS15340	COG3708	Transcriptional regulator
AT01_RS15345	COG3045	CreA protein
AT01_RS15350	COG0745	RESPONSE REGULATOR receiver
AT01_RS15365	COG0083	homoserine kinase activity
AT01_RS15375	COG3022	response to hydroperoxide
AT01_RS15385	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AT01_RS15390	COG0521	Mo-molybdopterin cofactor biosynthetic process
AT01_RS15400	COG1584	GPR1 FUN34 yaaH family protein
AT01_RS15410	COG0484	heat shock protein binding
AT01_RS15415	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AT01_RS15420	COG0583	DNA-binding transcription factor activity
AT01_RS15430	COG0196	riboflavin kinase activity
AT01_RS15435	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AT01_RS15440	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AT01_RS15445	COG1047	Peptidyl-prolyl cis-trans
AT01_RS15450	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
AT01_RS15465	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
AT01_RS15470	COG1280	lysine exporter protein (LysE YggA)
AT01_RS15475	COG2966	Psort location CytoplasmicMembrane, score
AT01_RS15485	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AT01_RS15490	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AT01_RS15505	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
AT01_RS15515	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
AT01_RS15520	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AT01_RS15525	COG0564	pseudouridine synthase activity
AT01_RS15555	COG1388	LysM domain
AT01_RS15555	COG1470	cell adhesion involved in biofilm formation
AT01_RS15575	COG1289	transmembrane transporter activity
AT01_RS15610	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
AT01_RS15615	COG0417	DNA replication proofreading
AT01_RS15620	COG0586	Pfam SNARE associated Golgi protein
AT01_RS15630	COG1178	ABC-type Fe3 transport system permease component
AT01_RS15635	COG4143	(ABC) transporter
AT01_RS15650	COG4533	DNA binding
AT01_RS15655	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AT01_RS15670	COG2814	Major facilitator Superfamily
AT01_RS15680	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
AT01_RS15685	COG0473	3-isopropylmalate dehydrogenase activity
AT01_RS15690	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
AT01_RS15700	COG1022	Amp-dependent synthetase and ligase
AT01_RS15705	COG0028	Belongs to the TPP enzyme family
AT01_RS15730	COG0275	rRNA processing
AT01_RS15735	COG3116	cell division
AT01_RS15740	COG0768	penicillin binding
AT01_RS15745	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AT01_RS15750	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AT01_RS15755	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AT01_RS15765	COG0772	Belongs to the SEDS family
AT01_RS15770	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AT01_RS15775	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AT01_RS15785	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
AT01_RS15790	COG0849	cell division
AT01_RS15795	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AT01_RS15815	COG0653	protein targeting
AT01_RS15820	COG0494	nUDIX hydrolase
AT01_RS15825	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
AT01_RS15840	COG0516	GMP reductase activity
AT01_RS15845	COG1459	type II secretion system
AT01_RS15850	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AT01_RS15855	COG4969	Belongs to the N-Me-Phe pilin family
AT01_RS15870	COG3725	Membrane protein required for beta-lactamase induction
AT01_RS15880	COG3940	Belongs to the glycosyl hydrolase 43 family
AT01_RS15885	COG2211	Major facilitator Superfamily
AT01_RS15890	COG1113	amino acid transport
AT01_RS15895	COG2186	Transcriptional regulator
AT01_RS15900	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AT01_RS15905	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT01_RS15910	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AT01_RS15935	COG3112	Uncharacterised protein family (UPF0231)
AT01_RS15940	COG0697	spore germination
AT01_RS15945	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
AT01_RS15950	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
AT01_RS15960	COG2132	Multicopper oxidase
AT01_RS15970	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AT01_RS15975	COG0288	reversible hydration of carbon dioxide
AT01_RS15980	COG1131	(ABC) transporter
AT01_RS15985	COG0842	Transport permease protein
AT01_RS15990	COG0726	polysaccharide deacetylase
AT01_RS15995	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
AT01_RS16000	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
AT01_RS16005	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
AT01_RS16010	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AT01_RS16015	COG0617	tRNA 3'-terminal CCA addition
AT01_RS16035	COG1489	DNA binding
AT01_RS16040	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AT01_RS16045	COG1643	Atp-dependent helicase
AT01_RS16050	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AT01_RS16055	COG1120	ATPase activity
AT01_RS16060	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AT01_RS16065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS16070	COG2223	nitrite transmembrane transporter activity
AT01_RS16075	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
AT01_RS16085	COG0316	Belongs to the HesB IscA family
AT01_RS16090	COG2860	membrane
AT01_RS16105	COG0232	Belongs to the dGTPase family. Type 2 subfamily
AT01_RS16110	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AT01_RS16125	COG4999	Histidine kinase
AT01_RS16125	COG3850	Histidine kinase
AT01_RS16125	COG2205	protein histidine kinase activity
AT01_RS16125	COG3437	response regulator, receiver
AT01_RS16130	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AT01_RS16135	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AT01_RS16140	COG3956	TIGRFAM MazG family protein
AT01_RS16145	COG0504	CTP synthase activity
AT01_RS16150	COG0148	phosphopyruvate hydratase activity
AT01_RS16165	COG0602	queuosine metabolic process
AT01_RS16170	COG0720	synthase
AT01_RS16175	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
AT01_RS16180	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AT01_RS16185	COG0175	sulfate reduction
AT01_RS16200	COG2234	aminopeptidase activity
AT01_RS16205	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT01_RS16205	COG1648	precorrin-2 dehydrogenase activity
AT01_RS16210	COG0175	sulfate reduction
AT01_RS16215	COG2895	sulfate adenylyltransferase (ATP) activity
AT01_RS16220	COG0529	Catalyzes the synthesis of activated sulfate
AT01_RS16235	COG0765	amino acid transport
AT01_RS16245	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
AT01_RS16255	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
AT01_RS16260	COG0585	pseudouridine synthase activity
AT01_RS16265	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
AT01_RS16270	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
AT01_RS16275	COG1388	LysM domain
AT01_RS16275	COG4942	peptidase
AT01_RS16280	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
AT01_RS16285	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AT01_RS16315	COG3188	usher protein
AT01_RS16320	COG3121	Chaperone
AT01_RS16325	COG3539	Fimbrial protein
AT01_RS16330	COG3539	Fimbrial protein
AT01_RS16365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT01_RS16370	COG0577	efflux transmembrane transporter activity
AT01_RS16370	COG1136	(ABC) transporter
AT01_RS16375	COG1538	Outer membrane efflux protein
AT01_RS16395	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS16400	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS16405	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AT01_RS16415	COG3048	D-serine ammonia-lyase activity
AT01_RS16420	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AT01_RS16425	COG0640	Transcriptional regulator
AT01_RS16430	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AT01_RS16430	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AT01_RS16435	COG1349	DNA-binding transcription factor activity
AT01_RS16445	COG1070	Carbohydrate kinase
AT01_RS16450	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
AT01_RS16455	COG0738	Major facilitator superfamily
AT01_RS16460	COG0235	Class ii aldolase
AT01_RS16465	COG1454	alcohol dehydrogenase
AT01_RS16470	COG0243	molybdopterin cofactor binding
AT01_RS16475	COG0437	4 iron, 4 sulfur cluster binding
AT01_RS16480	COG3302	dmso reductase anchor subunit
AT01_RS16485	COG3381	protein complex oligomerization
AT01_RS16505	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AT01_RS16510	COG2137	regulation of response to DNA damage stimulus
AT01_RS16515	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AT01_RS16520	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AT01_RS16545	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT01_RS16550	COG1238	metal cluster binding
AT01_RS16555	COG2918	glutathione biosynthetic process
AT01_RS16560	COG1854	S-ribosylhomocysteine lyase activity
AT01_RS16565	COG4536	flavin adenine dinucleotide binding
AT01_RS16570	COG4137	Cytochrome C assembly protein
AT01_RS16575	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AT01_RS16585	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AT01_RS16590	COG0336	Belongs to the RNA methyltransferase TrmD family
AT01_RS16595	COG0335	large ribosomal subunit rRNA binding
AT01_RS16600	COG3137	Salt-induced outer membrane protein
AT01_RS16605	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AT01_RS16610	COG3279	Response regulator of the LytR AlgR family
AT01_RS16615	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AT01_RS16620	COG0287	Prephenate dehydrogenase
AT01_RS16620	COG1605	Chorismate mutase
AT01_RS16625	COG0077	Prephenate dehydratase
AT01_RS16625	COG1605	Chorismate mutase
AT01_RS16630	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AT01_RS16635	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT01_RS16640	COG0564	pseudouridine synthase activity
AT01_RS16650	COG0542	response to heat
AT01_RS16700	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT01_RS16705	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AT01_RS16760	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS16770	COG3021	interspecies interaction between organisms
AT01_RS16780	COG1388	LysM domain
AT01_RS16780	COG0741	lytic transglycosylase activity
AT01_RS16785	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AT01_RS16790	COG2226	methyltransferase
AT01_RS16820	COG2113	Glycine betaine
AT01_RS16825	COG4176	ABC-type proline glycine betaine transport system permease component
AT01_RS16830	COG4175	Glycine betaine
AT01_RS16835	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AT01_RS16855	COG4575	ribosome binding
AT01_RS16870	COG2207	Transcriptional regulator
AT01_RS16895	COG1278	Cold shock
AT01_RS16905	COG0747	negative chemotaxis
AT01_RS16910	COG0601	transmembrane transport
AT01_RS16915	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AT01_RS16925	COG1124	(ABC) transporter
AT01_RS16930	COG0831	urea catabolic process
AT01_RS16940	COG0804	urea catabolic process
AT01_RS16945	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
AT01_RS16950	COG0830	nickel cation binding
AT01_RS16955	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AT01_RS16960	COG0829	nickel cation binding
AT01_RS16965	COG4413	Urea transporter
AT01_RS16970	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
AT01_RS16980	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AT01_RS16995	COG2133	pyrroloquinoline quinone binding
AT01_RS17000	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AT01_RS17005	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AT01_RS17010	COG2723	6-phospho-beta-galactosidase activity
AT01_RS17015	COG1447	Phosphotransferase system cellobiose-specific component IIA
AT01_RS17020	COG1917	Cupin 2, conserved barrel domain protein
AT01_RS17020	COG2169	Transcriptional regulator
AT01_RS17025	COG3394	polysaccharide catabolic process
AT01_RS17030	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AT01_RS17075	COG0210	DNA helicase
AT01_RS17080	COG0582	viral genome integration into host DNA
AT01_RS17085	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
AT01_RS17090	COG2867	negative regulation of translational initiation
AT01_RS17100	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT01_RS17105	COG0497	DNA recombination
AT01_RS17110	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AT01_RS17125	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
AT01_RS17155	COG0513	Belongs to the DEAD box helicase family
AT01_RS17165	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AT01_RS17175	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
AT01_RS17180	COG3026	antisigma factor binding
AT01_RS17185	COG3086	response to oxidative stress
AT01_RS17195	COG0481	GTPase activity
AT01_RS17205	COG0571	ribonuclease III activity
AT01_RS17210	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AT01_RS17215	COG1381	Involved in DNA repair and RecF pathway recombination
AT01_RS17220	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AT01_RS17225	COG0736	holo-[acyl-carrier-protein] synthase activity
AT01_RS17230	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT01_RS17235	COG1737	Transcriptional regulator
AT01_RS17245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT01_RS17245	COG1263	PTS System
AT01_RS17250	COG0560	Phosphoserine phosphatase
AT01_RS17260	COG0590	tRNA wobble adenosine to inosine editing
AT01_RS17265	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
AT01_RS17275	COG1105	Belongs to the carbohydrate kinase PfkB family
AT01_RS17285	COG2205	protein histidine kinase activity
AT01_RS17290	COG3170	Tfp pilus assembly protein FimV
AT01_RS17295	COG2204	response regulator
AT01_RS17300	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
AT01_RS17300	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AT01_RS17305	COG0347	Belongs to the P(II) protein family
AT01_RS17320	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AT01_RS17335	COG2188	Transcriptional regulator
AT01_RS17340	COG1017	nitric oxide dioxygenase activity
AT01_RS17340	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AT01_RS17350	COG2814	Major facilitator Superfamily
AT01_RS17355	COG3711	transcriptional antiterminator
AT01_RS17365	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AT01_RS17370	COG0483	inositol monophosphate 1-phosphatase activity
AT01_RS17375	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AT01_RS17380	COG1959	2 iron, 2 sulfur cluster binding
AT01_RS17390	COG0822	iron-sulfur transferase activity
AT01_RS17395	COG0316	Belongs to the HesB IscA family
AT01_RS17400	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AT01_RS17405	COG0443	Heat shock 70 kDa protein
AT01_RS17410	COG0633	Ferredoxin
AT01_RS17415	COG2975	iron-sulfur cluster assembly
AT01_RS17430	COG2373	Large extracellular alpha-helical protein
AT01_RS17435	COG4953	penicillin-binding protein 1C
AT01_RS17445	COG0105	UTP biosynthetic process
AT01_RS17450	COG0820	rRNA (adenine-C2-)-methyltransferase activity
AT01_RS17460	COG1426	Protein conserved in bacteria
AT01_RS17470	COG0124	histidyl-tRNA synthetase
AT01_RS17475	COG2976	Protein conserved in bacteria
AT01_RS17480	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AT01_RS17495	COG1645	bacterial-type flagellum-dependent swarming motility
AT01_RS17500	COG1570	exodeoxyribonuclease VII activity
AT01_RS17505	COG0517	IMP dehydrogenase activity
AT01_RS17505	COG0516	GMP reductase activity
AT01_RS17510	COG0518	GMP synthase (glutamine-hydrolyzing) activity
AT01_RS17510	COG0519	Catalyzes the synthesis of GMP from XMP
AT01_RS17540	COG0351	phosphomethylpyrimidine kinase
AT01_RS17560	COG1349	DNA-binding transcription factor activity
AT01_RS17565	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS17570	COG1028	Short-chain dehydrogenase reductase Sdr
AT01_RS17585	COG3730	PTS system glucitol sorbitol-specific
AT01_RS17590	COG1597	lipid kinase activity
AT01_RS17595	COG0826	peptidase U32
AT01_RS17600	COG3422	double-strand break repair
AT01_RS17605	COG0745	RESPONSE REGULATOR receiver
AT01_RS17610	COG2205	protein histidine kinase activity
AT01_RS17615	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT01_RS17625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT01_RS17650	COG3121	Chaperone
AT01_RS17660	COG0443	Heat shock 70 kDa protein
AT01_RS17665	COG3447	MASE1 domain protein
AT01_RS17665	COG5001	Diguanylate cyclase
AT01_RS17665	COG5002	protein histidine kinase activity
AT01_RS17670	COG2239	Acts as a magnesium transporter
AT01_RS17685	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AT01_RS17695	COG0581	inorganic phosphate transmembrane transporter activity
AT01_RS17705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AT01_RS17710	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AT01_RS17715	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
AT01_RS17725	COG2233	PERMEase
AT01_RS17730	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AT01_RS17735	COG1393	Belongs to the ArsC family
AT01_RS17740	COG4783	chaperone-mediated protein folding
AT01_RS17745	COG0628	permease
AT01_RS17750	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AT01_RS17755	COG2716	regulation of RNA biosynthetic process
AT01_RS17760	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AT01_RS17765	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AT01_RS17775	COG2321	neutral zinc metallopeptidase
AT01_RS17795	COG1876	peptidase activity
AT01_RS17800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
AT01_RS17805	COG1393	Belongs to the ArsC family
AT01_RS17815	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AT01_RS17825	COG2197	response regulator
AT01_RS17830	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT01_RS17830	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT01_RS17835	COG3062	negative regulation of establishment of protein localization
AT01_RS17840	COG0243	molybdopterin cofactor binding
AT01_RS17845	COG3043	anaerobic respiration
AT01_RS17850	COG3005	denitrification pathway
AT01_RS17865	COG1671	Belongs to the UPF0178 family
AT01_RS17880	COG3111	PFAM Bacterial OB fold (BOF) protein
AT01_RS17890	COG2837	iron assimilation
AT01_RS17895	COG4150	thiosulfate binding
AT01_RS17900	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AT01_RS17905	COG4208	sulfate ABC transporter
AT01_RS17920	COG0577	efflux transmembrane transporter activity
AT01_RS17920	COG1136	(ABC) transporter
AT01_RS17925	COG2205	protein histidine kinase activity
AT01_RS17940	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AT01_RS17950	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
AT01_RS17960	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AT01_RS17965	COG3530	Putative quorum-sensing-regulated virulence factor
AT01_RS17990	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AT01_RS18015	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AT01_RS18020	COG1914	H( )-stimulated, divalent metal cation uptake system
AT01_RS18030	COG0667	Aldo Keto reductase
AT01_RS18035	COG3961	Belongs to the TPP enzyme family
AT01_RS18055	COG2223	nitrite transmembrane transporter activity
AT01_RS18060	COG3279	Response regulator of the LytR AlgR family
AT01_RS18065	COG3275	phosphorelay sensor kinase activity
AT01_RS18080	COG0436	Aminotransferase
AT01_RS18085	COG3038	cytochrome b561
AT01_RS18090	COG1598	PFAM Uncharacterised protein family UPF0150
AT01_RS18130	COG2951	lytic endotransglycosylase activity
AT01_RS18135	COG0531	amino acid
AT01_RS18155	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AT01_RS18160	COG1127	ABC transporter
AT01_RS18180	COG0626	cystathionine gamma-synthase activity
AT01_RS18190	COG3038	cytochrome b561
AT01_RS18195	COG2353	YceI-like domain
AT01_RS18205	COG1695	Transcriptional regulator
AT01_RS18225	COG2979	Protein of unknown function (DUF533)
AT01_RS18250	COG2801	Transposase and inactivated derivatives
AT01_RS18255	COG2963	transposase activity
AT01_RS18270	COG2850	peptidyl-arginine hydroxylation
AT01_RS18290	COG3121	Chaperone
AT01_RS18305	COG2197	response regulator
AT01_RS18320	COG5265	(ABC) transporter
AT01_RS18345	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AT01_RS18355	COG2197	response regulator
AT01_RS18360	COG1278	Cold shock
AT01_RS18370	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AT01_RS18375	COG3706	GGDEF domain
AT01_RS18380	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
AT01_RS18385	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
AT01_RS18390	COG0321	lipoyl(octanoyl) transferase activity
AT01_RS18400	COG1686	Belongs to the peptidase S11 family
AT01_RS18405	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AT01_RS18410	COG0772	Belongs to the SEDS family
AT01_RS18415	COG0768	penicillin binding
AT01_RS18425	COG0799	negative regulation of ribosome biogenesis
AT01_RS18430	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AT01_RS18435	COG1466	dna polymerase III delta subunit
AT01_RS18440	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
AT01_RS18450	COG2888	peptidyl-tyrosine sulfation
AT01_RS18455	COG1126	abc transporter atp-binding protein
AT01_RS18460	COG0765	amino acid transport
AT01_RS18465	COG0765	amino acid transport
AT01_RS18480	COG0815	Transfers the fatty acyl group on membrane lipoproteins
AT01_RS18485	COG4535	Mg2 and Co2 transporter CorC
AT01_RS18490	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AT01_RS18495	COG1702	phosphate starvation-inducible protein PhoH
AT01_RS18500	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
AT01_RS18505	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AT01_RS18540	COG0367	asparagine synthase
AT01_RS18545	COG0647	UMP catabolic process
AT01_RS18550	COG1940	carbohydrate kinase activity
AT01_RS18550	COG1846	Transcriptional regulator
AT01_RS18555	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AT01_RS18560	COG0363	glucosamine-6-phosphate deaminase activity
AT01_RS18565	COG1263	PTS System
AT01_RS18565	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AT01_RS18565	COG2190	(PTS) system
AT01_RS18570	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AT01_RS18590	COG0735	belongs to the Fur family
AT01_RS18600	COG0840	transmembrane signaling receptor activity
AT01_RS18610	COG0596	Alpha beta hydrolase
AT01_RS18615	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AT01_RS18620	COG0033	Phosphoglucomutase
AT01_RS18630	COG0745	RESPONSE REGULATOR receiver
AT01_RS18635	COG2205	protein histidine kinase activity
AT01_RS18640	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
AT01_RS18645	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
AT01_RS18665	COG3272	Protein of unknown function (DUF1722)
AT01_RS18675	COG5212	phosphodiesterase
AT01_RS18680	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AT01_RS18685	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AT01_RS18690	COG1984	allophanate hydrolase subunit 2
AT01_RS18695	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
AT01_RS18720	COG2009	succinate dehydrogenase
AT01_RS18725	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AT01_RS18730	COG1053	succinate dehydrogenase
AT01_RS18740	COG0567	Dehydrogenase, E1 component
AT01_RS18745	COG0508	dehydrogenase complex catalyzes the overall conversion of
AT01_RS18755	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AT01_RS18760	COG0737	Belongs to the 5'-nucleotidase family
AT01_RS18765	COG1271	oxidase subunit
AT01_RS18770	COG1294	oxidase, subunit
AT01_RS18775	COG4890	Cyd operon protein YbgT
AT01_RS18780	COG3790	cyd operon protein YbgE
AT01_RS18785	COG0824	Thioesterase
AT01_RS18790	COG0811	peptide transport
AT01_RS18795	COG0848	biopolymer transport protein
AT01_RS18800	COG3064	Membrane
AT01_RS18800	COG3064	Membrane
AT01_RS18805	COG0823	Involved in the tonB-independent uptake of proteins
AT01_RS18810	COG2885	chlorophyll binding
AT01_RS18815	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AT01_RS18840	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
AT01_RS18850	COG1230	cation diffusion facilitator family transporter
AT01_RS18855	COG2205	protein histidine kinase activity
AT01_RS18855	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS18860	COG2197	response regulator
AT01_RS18865	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AT01_RS18870	COG0588	phosphoglycerate mutase activity
AT01_RS18880	COG2017	converts alpha-aldose to the beta-anomer
AT01_RS18885	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AT01_RS18895	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AT01_RS18905	COG1119	ATPase activity
AT01_RS18910	COG2005	Transcriptional regulator
AT01_RS18910	COG3585	molybdate ion transport
AT01_RS18920	COG0725	ABC transporter, periplasmic molybdate-binding protein
AT01_RS18925	COG4149	molybdate abc transporter
AT01_RS18935	COG0561	phosphatase activity
AT01_RS18955	COG0156	8-amino-7-oxononanoate synthase activity
AT01_RS18960	COG2226	methyltransferase
AT01_RS18975	COG0556	nucleotide-excision repair
AT01_RS18980	COG4628	conserved protein (DUF2132)
AT01_RS18995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AT01_RS19000	COG1120	ATPase activity
AT01_RS19005	COG0391	Required for morphogenesis under gluconeogenic growth conditions
AT01_RS19010	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
AT01_RS19020	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AT01_RS19025	COG0314	molybdopterin synthase activity
AT01_RS19030	COG0670	Belongs to the BI1 family
AT01_RS19035	COG0842	Transport permease protein
AT01_RS19040	COG0842	Transport permease protein
AT01_RS19045	COG1131	(ABC) transporter
AT01_RS19050	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AT01_RS19055	COG1309	transcriptional regulator
AT01_RS19060	COG0513	Belongs to the DEAD box helicase family
AT01_RS19065	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AT01_RS19080	COG1686	Belongs to the peptidase S11 family
AT01_RS19085	COG0277	FAD linked oxidase domain protein
AT01_RS19100	COG2261	transglycosylase associated protein
AT01_RS19110	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AT01_RS19125	COG4807	Protein conserved in bacteria
AT01_RS19135	COG2897	thiosulfate sulfurtransferase activity
AT01_RS19145	COG1732	Glycine betaine
AT01_RS19150	COG1174	glycine betaine transport
AT01_RS19155	COG1125	glycine betaine transport
AT01_RS19160	COG1174	glycine betaine transport
AT01_RS19165	COG1982	Orn Lys Arg decarboxylase major
AT01_RS19175	COG0697	spore germination
AT01_RS19190	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AT01_RS19195	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AT01_RS19200	COG3129	Specifically methylates the adenine in position 1618 of 23S rRNA
AT01_RS19205	COG1126	abc transporter atp-binding protein
AT01_RS19210	COG0765	amino acid transport
AT01_RS19215	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AT01_RS19220	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AT01_RS19225	COG0783	Belongs to the Dps family
AT01_RS19230	COG4106	trans-aconitate 2-methyltransferase activity
AT01_RS19245	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AT01_RS19270	COG0488	(ABC) transporter
AT01_RS19275	COG3397	chitin binding
AT01_RS19280	COG3328	transposase activity
AT01_RS19290	COG0303	'Molybdopterin
AT01_RS19300	COG0477	Major facilitator Superfamily
AT01_RS19305	COG1136	(ABC) transporter
AT01_RS19320	COG2801	Transposase and inactivated derivatives
AT01_RS19325	COG2963	transposase activity
AT01_RS19345	COG0583	DNA-binding transcription factor activity
AT01_RS19350	COG0477	Major facilitator Superfamily
AT01_RS19355	COG0302	gtp cyclohydrolase
AT01_RS19360	COG2311	Membrane
AT01_RS19365	COG1609	Transcriptional regulator
AT01_RS19385	COG3604	Transcriptional regulator
AT01_RS19390	COG3383	formate dehydrogenase (NAD+) activity
AT01_RS19395	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT01_RS19400	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AT01_RS19410	COG3260	NADH ubiquinone oxidoreductase 20
AT01_RS19415	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AT01_RS19420	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AT01_RS19420	COG3261	NADH dehydrogenase
AT01_RS19425	COG0651	ATP synthesis coupled electron transport
AT01_RS19430	COG4237	Hydrogenase 4 membrane
AT01_RS19435	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AT01_RS19440	COG0650	Formate hydrogenlyase subunit 4
AT01_RS19445	COG0651	ATP synthesis coupled electron transport
AT01_RS19450	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AT01_RS19455	COG0375	protein maturation
AT01_RS19460	COG0298	carbon dioxide binding
AT01_RS19465	COG2949	membrane
AT01_RS19470	COG0281	malic enzyme
AT01_RS19480	COG1346	cytolysis
AT01_RS19485	COG1380	Effector of murein hydrolase LrgA
AT01_RS19490	COG2814	Major facilitator Superfamily
AT01_RS19510	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT01_RS19510	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AT01_RS19515	COG0489	protein tyrosine kinase activity
AT01_RS19520	COG0572	uridine kinase
AT01_RS19530	COG2982	Protein involved in outer membrane biogenesis
AT01_RS19535	COG3069	C4-dicarboxylate transmembrane transporter activity
AT01_RS19540	COG1253	flavin adenine dinucleotide binding
AT01_RS19590	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AT01_RS19605	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
AT01_RS19625	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT01_RS19630	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AT01_RS19640	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AT01_RS19645	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
AT01_RS19645	COG0140	phosphoribosyl-ATP diphosphatase activity
AT01_RS19650	COG0107	imidazoleglycerol-phosphate synthase activity
AT01_RS19655	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
AT01_RS19665	COG0131	Imidazoleglycerol-phosphate dehydratase
AT01_RS19665	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AT01_RS19670	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AT01_RS19680	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
AT01_RS19685	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AT01_RS19690	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS19695	COG1129	ABC transporter
AT01_RS19700	COG0371	Dehydrogenase
AT01_RS19710	COG0531	amino acid
AT01_RS19715	COG2925	Exonuclease
AT01_RS19720	COG3320	Male sterility
AT01_RS19720	COG1022	Amp-dependent synthetase and ligase
AT01_RS19725	COG1289	transmembrane transporter activity
AT01_RS19740	COG1172	Belongs to the binding-protein-dependent transport system permease family
AT01_RS19745	COG1129	ABC transporter
AT01_RS19765	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AT01_RS19770	COG1648	precorrin-2 dehydrogenase activity
AT01_RS19770	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
AT01_RS19775	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AT01_RS19795	COG4656	Part of a membrane complex involved in electron transport
AT01_RS19805	COG1012	belongs to the aldehyde dehydrogenase family
AT01_RS19815	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
AT01_RS19890	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AT01_RS19900	COG1903	Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
AT01_RS19965	COG1492	cobalamin metabolic process
AT01_RS19985	COG2038	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
AT01_RS20050	COG3121	Chaperone
AT01_RS20055	COG3188	usher protein
AT01_RS20125	COG0137	argininosuccinate synthase activity
AT01_RS20130	COG0534	Mate efflux family protein
AT01_RS20175	COG0582	viral genome integration into host DNA
AT01_RS20200	COG2373	Large extracellular alpha-helical protein
AT01_RS20200	COG4932	domain protein
AT01_RS20200	COG1388	LysM domain
AT01_RS20240	COG1304	FMN binding
AT01_RS20255	COG5301	cellulose 1,4-beta-cellobiosidase activity
AT01_RS20270	COG2197	response regulator
AT01_RS20275	COG3539	Fimbrial protein
AT01_RS20285	COG2084	Dehydrogenase
AT01_RS20290	COG3157	Type VI secretion system effector, Hcp