AT01_RS00005 SM00260 Two component signalling adaptor domain AT01_RS00055 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS00055 SM00387 Histidine kinase-like ATPases AT01_RS00055 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS00055 SM00448 cheY-homologous receiver domain AT01_RS00060 SM00421 helix_turn_helix, Lux Regulon AT01_RS00060 SM00448 cheY-homologous receiver domain AT01_RS00070 SM00382 ATPases associated with a variety of cellular activities AT01_RS00090 SM00387 Histidine kinase-like ATPases AT01_RS00095 SM00421 helix_turn_helix, Lux Regulon AT01_RS00095 SM00448 cheY-homologous receiver domain AT01_RS00100 SM00448 cheY-homologous receiver domain AT01_RS00105 SM00091 PAS domain AT01_RS00105 SM00387 Histidine kinase-like ATPases AT01_RS00110 SM00764 Citrate lyase ligase C-terminal domain AT01_RS00195 SM00420 helix_turn_helix, Deoxyribose operon repressor AT01_RS00195 SM01134 AT01_RS00195 AT01_RS00265 SM00344 helix_turn_helix ASNC type AT01_RS00275 SM00829 Enoylreductase AT01_RS00280 SM01038 Beta galactosidase small chain AT01_RS00285 SM00357 Cold shock protein domain AT01_RS00295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AT01_RS00295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS00295 SM00319 Homologues of the ligand binding domain of Tar AT01_RS00305 SM00831 Cation transporter/ATPase, N-terminus AT01_RS00310 SM00829 Enoylreductase AT01_RS00340 SM00073 Histidine Phosphotransfer domain AT01_RS00340 SM00260 Two component signalling adaptor domain AT01_RS00340 SM00387 Histidine kinase-like ATPases AT01_RS00340 SM01231 AT01_RS00340 AT01_RS00345 SM00260 Two component signalling adaptor domain AT01_RS00355 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AT01_RS00355 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS00355 SM00319 Homologues of the ligand binding domain of Tar AT01_RS00360 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AT01_RS00360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS00360 SM00319 Homologues of the ligand binding domain of Tar AT01_RS00365 SM00138 Methyltransferase, chemotaxis proteins AT01_RS00370 SM00448 cheY-homologous receiver domain AT01_RS00375 SM00448 cheY-homologous receiver domain AT01_RS00410 SM00858 AT01_RS00410 AT01_RS00455 SM00047 Lysozyme subfamily 2 AT01_RS00515 SM00382 ATPases associated with a variety of cellular activities AT01_RS00540 SM00478 endonuclease III AT01_RS00545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AT01_RS00550 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS00590 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS00590 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AT01_RS00600 SM00382 ATPases associated with a variety of cellular activities AT01_RS00645 SM00363 S4 RNA-binding domain AT01_RS00665 SM00642 Alpha-amylase domain AT01_RS00680 SM00421 helix_turn_helix, Lux Regulon AT01_RS00680 SM00448 cheY-homologous receiver domain AT01_RS00685 SM00465 GIY-YIG type nucleases (URI domain) AT01_RS00755 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS00820 SM00634 Bacterial Ig-like domain (group 1) AT01_RS00840 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS00855 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS00895 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS00990 SM01022 AT01_RS00990 AT01_RS01000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AT01_RS01000 SM00091 PAS domain AT01_RS01000 SM00267 diguanylate cyclase AT01_RS01020 SM00945 ProQ/FINO family AT01_RS01025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AT01_RS01025 SM00245 tail specific protease AT01_RS01045 SM00346 helix_turn_helix isocitrate lyase regulation AT01_RS01050 SM00644 AT01_RS01050 AT01_RS01080 SM00382 ATPases associated with a variety of cellular activities AT01_RS01160 SM00382 ATPases associated with a variety of cellular activities AT01_RS01205 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AT01_RS01230 SM00873 B3/4 domain AT01_RS01230 SM00874 tRNA synthetase B5 domain AT01_RS01230 SM00896 Ferredoxin-fold anticodon binding domain AT01_RS01235 SM00411 bacterial (prokaryotic) histone like domain AT01_RS01255 SM00382 ATPases associated with a variety of cellular activities AT01_RS01365 SM00382 ATPases associated with a variety of cellular activities AT01_RS01440 SM00354 helix_turn _helix lactose operon repressor AT01_RS01460 SM00479 AT01_RS01460 AT01_RS01510 SM00347 helix_turn_helix multiple antibiotic resistance protein AT01_RS01535 SM00363 S4 RNA-binding domain AT01_RS01575 SM00382 ATPases associated with a variety of cellular activities AT01_RS01580 SM00382 ATPases associated with a variety of cellular activities AT01_RS01610 SM00382 ATPases associated with a variety of cellular activities AT01_RS01645 SM00953 AT01_RS01645 AT01_RS01655 SM00091 PAS domain AT01_RS01655 SM00382 ATPases associated with a variety of cellular activities AT01_RS01665 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AT01_RS01700 SM00148 Phospholipase C, catalytic domain (part); domain X AT01_RS01705 SM00890 Domain of unknown function AT01_RS01755 SM00382 ATPases associated with a variety of cellular activities AT01_RS01755 SM00487 DEAD-like helicases superfamily AT01_RS01755 SM00490 helicase superfamily c-terminal domain AT01_RS01755 SM00847 Helicase associated domain (HA2) Add an annotation AT01_RS01770 SM00857 Resolvase, N terminal domain AT01_RS01875 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS01880 SM00020 Trypsin-like serine protease AT01_RS01895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS01895 SM00387 Histidine kinase-like ATPases AT01_RS01895 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS01900 SM00448 cheY-homologous receiver domain AT01_RS01900 SM00862 Transcriptional regulatory protein, C terminal AT01_RS01925 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AT01_RS01925 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AT01_RS01940 SM00100 Cyclic nucleotide-monophosphate binding domain AT01_RS01940 SM00419 helix_turn_helix, cAMP Regulatory protein AT01_RS01955 SM00871 Bacterial transcription activator, effector binding domain AT01_RS01960 SM00098 Alkaline phosphatase homologues AT01_RS02030 SM00421 helix_turn_helix, Lux Regulon AT01_RS02035 SM00869 Autotransporter beta-domain AT01_RS02055 SM00634 Bacterial Ig-like domain (group 1) AT01_RS02075 SM01057 Eukaryotic-type carbonic anhydrase AT01_RS02100 SM00421 helix_turn_helix, Lux Regulon AT01_RS02175 SM00354 helix_turn _helix lactose operon repressor AT01_RS02205 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS02215 SM00382 ATPases associated with a variety of cellular activities AT01_RS02240 SM00382 ATPases associated with a variety of cellular activities AT01_RS02250 SM00382 ATPases associated with a variety of cellular activities AT01_RS02280 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS02290 SM00900 AT01_RS02290 AT01_RS02300 SM00478 endonuclease III AT01_RS02300 SM00525 AT01_RS02300 AT01_RS02310 SM00357 Cold shock protein domain AT01_RS02310 SM00955 AT01_RS02310 AT01_RS02330 SM00420 helix_turn_helix, Deoxyribose operon repressor AT01_RS02330 SM01134 AT01_RS02330 AT01_RS02340 SM01007 Class II Aldolase and Adducin N-terminal domain AT01_RS02355 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AT01_RS02370 SM00028 Tetratricopeptide repeats AT01_RS02380 SM00014 Acid phosphatase homologues AT01_RS02415 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AT01_RS02415 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AT01_RS02415 SM00493 AT01_RS02415 AT01_RS02430 SM00822 AT01_RS02430 AT01_RS02440 SM00363 S4 RNA-binding domain AT01_RS02450 SM00481 DNA polymerase alpha chain like domain AT01_RS02485 SM00749 bacterial OsmY and nodulation domain AT01_RS02530 SM00052 Putative diguanylate phosphodiesterase AT01_RS02535 SM00155 Phospholipase D. Active site motifs. AT01_RS02545 SM00382 ATPases associated with a variety of cellular activities AT01_RS02550 SM00382 ATPases associated with a variety of cellular activities AT01_RS02585 SM00528 Domain in histone-like proteins of HNS family AT01_RS02590 SM00984 UDP binding domain AT01_RS02595 SM00448 cheY-homologous receiver domain AT01_RS02650 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AT01_RS02650 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AT01_RS02650 SM00493 AT01_RS02650 AT01_RS02670 SM00870 AT01_RS02670 AT01_RS02690 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AT01_RS02705 SM00763 PrkA AAA domain AT01_RS02720 SM00052 Putative diguanylate phosphodiesterase AT01_RS02720 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AT01_RS02720 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AT01_RS02720 SM00091 PAS domain AT01_RS02720 SM00267 diguanylate cyclase AT01_RS02730 SM01005 Alanine racemase, C-terminal domain AT01_RS02745 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS02810 SM00341 Helicase and RNase D C-terminal AT01_RS02810 SM00474 3'-5' exonuclease AT01_RS02830 SM00487 DEAD-like helicases superfamily AT01_RS02830 SM00491 AT01_RS02830 AT01_RS02875 SM00257 Lysin motif AT01_RS02885 SM00382 ATPases associated with a variety of cellular activities AT01_RS02900 SM00382 ATPases associated with a variety of cellular activities AT01_RS02905 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AT01_RS02965 SM00836 DALR anticodon binding domain AT01_RS02965 SM01016 Arginyl tRNA synthetase N terminal dom AT01_RS03005 SM00481 DNA polymerase alpha chain like domain AT01_RS03030 SM00267 diguanylate cyclase AT01_RS03060 SM00937 AT01_RS03060 AT01_RS03080 SM01400 AT01_RS03080 AT01_RS03115 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AT01_RS03120 SM00257 Lysin motif AT01_RS03140 SM00382 ATPases associated with a variety of cellular activities AT01_RS03160 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS03160 SM00866 AT01_RS03160 AT01_RS03205 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS03225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS03225 SM00387 Histidine kinase-like ATPases AT01_RS03305 SM00382 ATPases associated with a variety of cellular activities AT01_RS03350 SM00387 Histidine kinase-like ATPases AT01_RS03355 SM00448 cheY-homologous receiver domain AT01_RS03380 SM00267 diguanylate cyclase AT01_RS03380 SM00448 cheY-homologous receiver domain AT01_RS03385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AT01_RS03385 SM00091 PAS domain AT01_RS03385 SM00387 Histidine kinase-like ATPases AT01_RS03385 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS03385 SM00448 cheY-homologous receiver domain AT01_RS03385 SM01079 AT01_RS03385 AT01_RS03430 SM00331 Sigma factor PP2C-like phosphatases AT01_RS03430 SM00448 cheY-homologous receiver domain AT01_RS03735 SM00470 ParB-like nuclease domain AT01_RS03795 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS03840 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS03910 SM00479 AT01_RS03910 AT01_RS03925 SM01022 AT01_RS03925 AT01_RS03935 SM00487 DEAD-like helicases superfamily AT01_RS03935 SM00490 helicase superfamily c-terminal domain AT01_RS03965 SM01091 Transporter associated domain AT01_RS04020 SM00357 Cold shock protein domain AT01_RS04070 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS04105 SM00382 ATPases associated with a variety of cellular activities AT01_RS04110 SM00090 RIO-like kinase AT01_RS04175 SM00354 helix_turn _helix lactose operon repressor AT01_RS04180 SM00640 Glycosyl hydrolases family 32 AT01_RS04200 SM01329 AT01_RS04200 AT01_RS04235 SM00448 cheY-homologous receiver domain AT01_RS04235 SM00862 Transcriptional regulatory protein, C terminal AT01_RS04240 SM00387 Histidine kinase-like ATPases AT01_RS04240 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS04245 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AT01_RS04270 SM00382 ATPases associated with a variety of cellular activities AT01_RS04280 SM00487 DEAD-like helicases superfamily AT01_RS04280 SM00490 helicase superfamily c-terminal domain AT01_RS04280 SM00982 AT01_RS04280 AT01_RS04280 SM01058 CarD-like/TRCF domain AT01_RS04355 SM00825 Beta-ketoacyl synthase AT01_RS04365 SM00822 AT01_RS04365 AT01_RS04370 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AT01_RS04400 SM00363 S4 RNA-binding domain AT01_RS04405 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS04440 SM00421 helix_turn_helix, Lux Regulon AT01_RS04455 SM00450 Rhodanese Homology Domain AT01_RS04515 SM01091 Transporter associated domain AT01_RS04530 SM00421 helix_turn_helix, Lux Regulon AT01_RS04560 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AT01_RS04565 SM00992 Hemimethylated DNA-binding protein YccV like AT01_RS04570 SM00881 CoA binding domain AT01_RS04580 SM00851 MGS-like domain AT01_RS04645 SM00382 ATPases associated with a variety of cellular activities AT01_RS04650 SM00981 AT01_RS04650 AT01_RS04695 SM00052 Putative diguanylate phosphodiesterase AT01_RS04700 SM00849 Metallo-beta-lactamase superfamily AT01_RS04755 SM00357 Cold shock protein domain AT01_RS04760 SM00357 Cold shock protein domain AT01_RS04765 SM01150 AT01_RS04765 AT01_RS04775 SM00382 ATPases associated with a variety of cellular activities AT01_RS04780 SM00849 Metallo-beta-lactamase superfamily AT01_RS04785 SM00411 bacterial (prokaryotic) histone like domain AT01_RS04790 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS04810 SM00870 AT01_RS04810 AT01_RS04845 SM00382 ATPases associated with a variety of cellular activities AT01_RS04855 SM00843 AT01_RS04855 AT01_RS04860 SM00344 helix_turn_helix ASNC type AT01_RS04870 SM00382 ATPases associated with a variety of cellular activities AT01_RS04875 SM00382 ATPases associated with a variety of cellular activities AT01_RS04885 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS04890 SM00382 ATPases associated with a variety of cellular activities AT01_RS04890 SM01086 C-terminal, D2-small domain, of ClpB protein AT01_RS04900 SM00357 Cold shock protein domain AT01_RS04905 SM00382 ATPases associated with a variety of cellular activities AT01_RS04970 SM00382 ATPases associated with a variety of cellular activities AT01_RS04975 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS04975 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AT01_RS04990 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS04990 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AT01_RS05015 SM00382 ATPases associated with a variety of cellular activities AT01_RS05075 SM00014 Acid phosphatase homologues AT01_RS05080 SM01133 AT01_RS05080 AT01_RS05085 SM00420 helix_turn_helix, Deoxyribose operon repressor AT01_RS05085 SM01134 AT01_RS05085 AT01_RS05100 SM00936 Penicillin-binding protein 5, C-terminal domain AT01_RS05105 SM00116 Domain in cystathionine beta-synthase and other proteins. AT01_RS05135 SM00382 ATPases associated with a variety of cellular activities AT01_RS05165 SM00518 AP endonuclease family 2 AT01_RS05210 SM00841 Elongation factor P, C-terminal AT01_RS05210 SM01185 AT01_RS05210 AT01_RS05225 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS05225 SM00895 AT01_RS05225 AT01_RS05240 SM00014 Acid phosphatase homologues AT01_RS05250 SM00052 Putative diguanylate phosphodiesterase AT01_RS05270 SM00382 ATPases associated with a variety of cellular activities AT01_RS05285 SM00363 S4 RNA-binding domain AT01_RS05290 SM00487 DEAD-like helicases superfamily AT01_RS05290 SM00490 helicase superfamily c-terminal domain AT01_RS05480 SM00382 ATPases associated with a variety of cellular activities AT01_RS05595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS05595 SM00387 Histidine kinase-like ATPases AT01_RS05595 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS05595 SM00448 cheY-homologous receiver domain AT01_RS05600 SM00421 helix_turn_helix, Lux Regulon AT01_RS05600 SM00448 cheY-homologous receiver domain AT01_RS05630 SM00387 Histidine kinase-like ATPases AT01_RS05635 SM00421 helix_turn_helix, Lux Regulon AT01_RS05635 SM00448 cheY-homologous receiver domain AT01_RS05640 SM00387 Histidine kinase-like ATPases AT01_RS05640 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS05640 SM00448 cheY-homologous receiver domain AT01_RS05645 SM00434 DNA Topoisomerase IV AT01_RS05695 SM00852 Probable molybdopterin binding domain AT01_RS05710 SM01060 AT01_RS05710 AT01_RS05735 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AT01_RS05815 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AT01_RS05815 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AT01_RS05820 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AT01_RS05855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AT01_RS05890 SM00354 helix_turn _helix lactose operon repressor AT01_RS05920 SM00052 Putative diguanylate phosphodiesterase AT01_RS05940 SM00382 ATPases associated with a variety of cellular activities AT01_RS05955 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS06000 SM00859 Semialdehyde dehydrogenase, NAD binding domain AT01_RS06010 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS06060 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AT01_RS06060 SM00091 PAS domain AT01_RS06060 SM00267 diguanylate cyclase AT01_RS06065 SM00825 Beta-ketoacyl synthase AT01_RS06105 SM00463 Small MutS-related domain AT01_RS06180 SM00382 ATPases associated with a variety of cellular activities AT01_RS06220 SM00634 Bacterial Ig-like domain (group 1) AT01_RS06245 SM00953 AT01_RS06245 AT01_RS06255 SM00857 Resolvase, N terminal domain AT01_RS06275 SM00470 ParB-like nuclease domain AT01_RS06320 SM00421 helix_turn_helix, Lux Regulon AT01_RS06325 SM00421 helix_turn_helix, Lux Regulon AT01_RS06325 SM00448 cheY-homologous receiver domain AT01_RS06330 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS06330 SM00387 Histidine kinase-like ATPases AT01_RS06330 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS06330 SM00448 cheY-homologous receiver domain AT01_RS06645 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS06755 SM00840 AT01_RS06755 AT01_RS06770 SM01001 AIR carboxylase AT01_RS06785 SM00382 ATPases associated with a variety of cellular activities AT01_RS06795 SM00822 AT01_RS06795 AT01_RS06805 SM00244 prohibitin homologues AT01_RS06825 SM00422 helix_turn_helix, mercury resistance AT01_RS06930 SM00387 Histidine kinase-like ATPases AT01_RS06935 SM00493 AT01_RS06935 AT01_RS06945 SM00382 ATPases associated with a variety of cellular activities AT01_RS07055 SM00382 ATPases associated with a variety of cellular activities AT01_RS07095 SM00938 Nitrogen regulatory protein P-II AT01_RS07100 SM00382 ATPases associated with a variety of cellular activities AT01_RS07105 SM00382 ATPases associated with a variety of cellular activities AT01_RS07110 SM00344 helix_turn_helix ASNC type AT01_RS07150 SM00411 bacterial (prokaryotic) histone like domain AT01_RS07155 SM00382 ATPases associated with a variety of cellular activities AT01_RS07155 SM00464 Found in ATP-dependent protease La (LON) AT01_RS07160 SM00382 ATPases associated with a variety of cellular activities AT01_RS07160 SM00994 ClpX C4-type zinc finger AT01_RS07160 SM01086 C-terminal, D2-small domain, of ClpB protein AT01_RS07240 SM00981 AT01_RS07240 AT01_RS07255 SM00861 Transketolase, pyrimidine binding domain AT01_RS07300 SM01323 AT01_RS07300 AT01_RS07340 SM00642 Alpha-amylase domain AT01_RS07360 SM00091 PAS domain AT01_RS07360 SM00387 Histidine kinase-like ATPases AT01_RS07360 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS07365 SM00448 cheY-homologous receiver domain AT01_RS07365 SM00862 Transcriptional regulatory protein, C terminal AT01_RS07430 SM01068 Putative carbohydrate binding domain AT01_RS07450 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AT01_RS07520 SM00900 AT01_RS07520 AT01_RS07560 SM00710 Parallel beta-helix repeats AT01_RS07560 SM00912 haemagglutination activity domain AT01_RS07595 SM01007 Class II Aldolase and Adducin N-terminal domain AT01_RS07625 SM00347 helix_turn_helix multiple antibiotic resistance protein AT01_RS07645 SM00967 RNA 2'-O ribose methyltransferase substrate binding AT01_RS07655 SM01144 AT01_RS07655 AT01_RS07660 SM00881 CoA binding domain AT01_RS07665 SM00155 Phospholipase D. Active site motifs. AT01_RS07705 SM00382 ATPases associated with a variety of cellular activities AT01_RS07705 SM00930 AT01_RS07705 AT01_RS07745 SM01322 AT01_RS07745 AT01_RS07765 SM00977 TilS substrate C-terminal domain AT01_RS07785 SM00481 DNA polymerase alpha chain like domain AT01_RS07815 SM00935 Outer membrane protein (OmpH-like) AT01_RS07825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AT01_RS07870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AT01_RS07885 SM00382 ATPases associated with a variety of cellular activities AT01_RS07925 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AT01_RS07925 SM00475 5'-3' exonuclease AT01_RS07965 SM00925 MltA specific insert domain AT01_RS07985 SM00646 AT01_RS07985 AT01_RS08080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AT01_RS08095 SM00927 DNA mismatch repair enzyme MutH AT01_RS08115 SM00563 Phosphate acyltransferases AT01_RS08120 SM00354 helix_turn _helix lactose operon repressor AT01_RS08125 SM00354 helix_turn _helix lactose operon repressor AT01_RS08150 SM00849 Metallo-beta-lactamase superfamily AT01_RS08165 SM00862 Transcriptional regulatory protein, C terminal AT01_RS08230 SM00947 Carbonic anhydrase AT01_RS08240 SM00822 AT01_RS08240 AT01_RS08250 SM00271 DnaJ molecular chaperone homology domain AT01_RS08255 SM00354 helix_turn _helix lactose operon repressor AT01_RS08275 SM00344 helix_turn_helix ASNC type AT01_RS08370 SM00937 AT01_RS08370 AT01_RS08400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS08400 SM00387 Histidine kinase-like ATPases AT01_RS08400 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS08405 SM00448 cheY-homologous receiver domain AT01_RS08405 SM00862 Transcriptional regulatory protein, C terminal AT01_RS08430 SM00822 AT01_RS08430 AT01_RS08460 SM01011 Aminopeptidase P, N-terminal domain AT01_RS08520 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AT01_RS08525 SM00861 Transketolase, pyrimidine binding domain AT01_RS08560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AT01_RS08565 SM00731 SprT homologues. AT01_RS08590 SM00732 Likely ribonuclease with RNase H fold. AT01_RS08625 SM01152 AT01_RS08625 AT01_RS08635 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS08660 SM00478 endonuclease III AT01_RS08660 SM00525 AT01_RS08660 AT01_RS08810 SM00849 Metallo-beta-lactamase superfamily AT01_RS08870 SM00869 Autotransporter beta-domain AT01_RS08905 SM00382 ATPases associated with a variety of cellular activities AT01_RS08915 SM01006 Siderophore biosynthesis protein domain AT01_RS08945 SM00670 Large family of predicted nucleotide-binding domains AT01_RS09050 SM00382 ATPases associated with a variety of cellular activities AT01_RS09075 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS09130 SM00421 helix_turn_helix, Lux Regulon AT01_RS09130 SM00448 cheY-homologous receiver domain AT01_RS09135 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS09135 SM00387 Histidine kinase-like ATPases AT01_RS09135 SM00448 cheY-homologous receiver domain AT01_RS09200 SM00382 ATPases associated with a variety of cellular activities AT01_RS09200 SM01086 C-terminal, D2-small domain, of ClpB protein AT01_RS09255 SM00382 ATPases associated with a variety of cellular activities AT01_RS09270 SM00354 helix_turn _helix lactose operon repressor AT01_RS09300 SM00052 Putative diguanylate phosphodiesterase AT01_RS09300 SM00091 PAS domain AT01_RS09300 SM00267 diguanylate cyclase AT01_RS09380 SM00862 Transcriptional regulatory protein, C terminal AT01_RS09410 SM00382 ATPases associated with a variety of cellular activities AT01_RS09515 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS09535 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS09550 SM00563 Phosphate acyltransferases AT01_RS09555 SM00434 DNA Topoisomerase IV AT01_RS09575 SM00387 Histidine kinase-like ATPases AT01_RS09575 SM00433 TopoisomeraseII AT01_RS09640 SM01118 AT01_RS09640 AT01_RS09645 SM00287 Bacterial SH3 domain homologues AT01_RS09650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AT01_RS09660 SM00905 Dihydroneopterin aldolase AT01_RS09665 SM01207 AT01_RS09665 AT01_RS09680 SM00400 zinc finger AT01_RS09680 SM00493 AT01_RS09680 AT01_RS09680 SM00766 DNA primase DnaG DnaB-binding AT01_RS09725 SM00869 Autotransporter beta-domain AT01_RS09755 SM00858 AT01_RS09755 AT01_RS09775 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS09775 SM00895 AT01_RS09775 AT01_RS09855 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS09900 SM00749 bacterial OsmY and nodulation domain AT01_RS09915 SM00073 Histidine Phosphotransfer domain AT01_RS09915 SM00091 PAS domain AT01_RS09915 SM00387 Histidine kinase-like ATPases AT01_RS09915 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS09915 SM00448 cheY-homologous receiver domain AT01_RS09920 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS09970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AT01_RS09975 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AT01_RS10010 SM00382 ATPases associated with a variety of cellular activities AT01_RS10040 SM00382 ATPases associated with a variety of cellular activities AT01_RS10085 SM00642 Alpha-amylase domain AT01_RS10095 SM00354 helix_turn _helix lactose operon repressor AT01_RS10100 SM00831 Cation transporter/ATPase, N-terminus AT01_RS10235 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS10260 SM00052 Putative diguanylate phosphodiesterase AT01_RS10260 SM00267 diguanylate cyclase AT01_RS10265 SM00829 Enoylreductase AT01_RS10290 SM00878 Biotin carboxylase C-terminal domain AT01_RS10330 SM00357 Cold shock protein domain AT01_RS10335 SM00357 Cold shock protein domain AT01_RS10360 SM00382 ATPases associated with a variety of cellular activities AT01_RS10415 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS10445 SM01005 Alanine racemase, C-terminal domain AT01_RS10450 SM00382 ATPases associated with a variety of cellular activities AT01_RS10455 SM00829 Enoylreductase AT01_RS10495 SM00563 Phosphate acyltransferases AT01_RS10520 SM00382 ATPases associated with a variety of cellular activities AT01_RS10560 SM01018 B12 binding domain AT01_RS10565 SM00346 helix_turn_helix isocitrate lyase regulation AT01_RS10625 SM00798 AICARFT/IMPCHase bienzyme AT01_RS10625 SM00851 MGS-like domain AT01_RS10630 SM01209 AT01_RS10630 AT01_RS10630 SM01210 AT01_RS10630 AT01_RS10640 SM00411 bacterial (prokaryotic) histone like domain AT01_RS10695 SM00876 Biotin and Thiamin Synthesis associated domain AT01_RS10700 SM00663 RNA polymerase I subunit A N-terminus AT01_RS10730 SM00649 Ribosomal protein L11/L12 AT01_RS10735 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AT01_RS10735 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AT01_RS10855 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AT01_RS10860 SM01004 Delta-aminolevulinic acid dehydratase AT01_RS10955 SM00382 ATPases associated with a variety of cellular activities AT01_RS11010 SM00382 ATPases associated with a variety of cellular activities AT01_RS11015 SM00382 ATPases associated with a variety of cellular activities AT01_RS11055 SM00382 ATPases associated with a variety of cellular activities AT01_RS11060 SM00382 ATPases associated with a variety of cellular activities AT01_RS11060 SM00962 SRP54-type protein, GTPase domain AT01_RS11060 SM00963 SRP54-type protein, helical bundle domain AT01_RS11155 SM00341 Helicase and RNase D C-terminal AT01_RS11155 SM00487 DEAD-like helicases superfamily AT01_RS11155 SM00490 helicase superfamily c-terminal domain AT01_RS11155 SM00956 AT01_RS11155 AT01_RS11230 SM01219 AT01_RS11230 AT01_RS11325 SM00984 UDP binding domain AT01_RS11345 SM00357 Cold shock protein domain AT01_RS11345 SM00382 ATPases associated with a variety of cellular activities AT01_RS11345 SM00959 Rho termination factor, N-terminal domain AT01_RS11355 SM00487 DEAD-like helicases superfamily AT01_RS11355 SM00490 helicase superfamily c-terminal domain AT01_RS11450 SM00382 ATPases associated with a variety of cellular activities AT01_RS11475 SM00382 ATPases associated with a variety of cellular activities AT01_RS11575 SM00382 ATPases associated with a variety of cellular activities AT01_RS11620 SM00859 Semialdehyde dehydrogenase, NAD binding domain AT01_RS11680 SM00487 DEAD-like helicases superfamily AT01_RS11680 SM00490 helicase superfamily c-terminal domain AT01_RS11685 SM00354 helix_turn _helix lactose operon repressor AT01_RS11700 SM00382 ATPases associated with a variety of cellular activities AT01_RS11700 SM01086 C-terminal, D2-small domain, of ClpB protein AT01_RS11780 SM00448 cheY-homologous receiver domain AT01_RS11780 SM00862 Transcriptional regulatory protein, C terminal AT01_RS11785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS11785 SM00387 Histidine kinase-like ATPases AT01_RS11785 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS11790 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS11800 SM00971 Serine acetyltransferase, N-terminal AT01_RS11820 SM00450 Rhodanese Homology Domain AT01_RS11840 SM00829 Enoylreductase AT01_RS11880 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AT01_RS11880 SM01232 AT01_RS11880 AT01_RS11930 SM00052 Putative diguanylate phosphodiesterase AT01_RS11930 SM00091 PAS domain AT01_RS11930 SM00267 diguanylate cyclase AT01_RS11955 SM00532 Ligase N family AT01_RS11960 SM00072 Guanylate kinase homologues. AT01_RS11965 SM01409 AT01_RS11965 AT01_RS11970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AT01_RS11970 SM00954 Region found in RelA / SpoT proteins AT01_RS11980 SM00487 DEAD-like helicases superfamily AT01_RS11980 SM00490 helicase superfamily c-terminal domain AT01_RS12000 SM00421 helix_turn_helix, Lux Regulon AT01_RS12005 SM00421 helix_turn_helix, Lux Regulon AT01_RS12010 SM00421 helix_turn_helix, Lux Regulon AT01_RS12015 SM00421 helix_turn_helix, Lux Regulon AT01_RS12020 SM00421 helix_turn_helix, Lux Regulon AT01_RS12025 SM00421 helix_turn_helix, Lux Regulon AT01_RS12030 SM00421 helix_turn_helix, Lux Regulon AT01_RS12035 SM00421 helix_turn_helix, Lux Regulon AT01_RS12070 SM01230 AT01_RS12070 AT01_RS12075 SM00091 PAS domain AT01_RS12075 SM00387 Histidine kinase-like ATPases AT01_RS12075 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS12080 SM00382 ATPases associated with a variety of cellular activities AT01_RS12080 SM00448 cheY-homologous receiver domain AT01_RS12085 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS12105 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AT01_RS12105 SM00474 3'-5' exonuclease AT01_RS12105 SM00475 5'-3' exonuclease AT01_RS12105 SM00482 DNA polymerase A domain AT01_RS12155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS12155 SM00895 AT01_RS12155 AT01_RS12165 SM00354 helix_turn _helix lactose operon repressor AT01_RS12185 SM00382 ATPases associated with a variety of cellular activities AT01_RS12200 SM00382 ATPases associated with a variety of cellular activities AT01_RS12205 SM00327 von Willebrand factor (vWF) type A domain AT01_RS12220 SM00344 helix_turn_helix ASNC type AT01_RS12230 SM01228 AT01_RS12230 AT01_RS12275 SM00382 ATPases associated with a variety of cellular activities AT01_RS12315 SM00382 ATPases associated with a variety of cellular activities AT01_RS12325 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS12355 SM00421 helix_turn_helix, Lux Regulon AT01_RS12355 SM00448 cheY-homologous receiver domain AT01_RS12360 SM00387 Histidine kinase-like ATPases AT01_RS12360 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS12365 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AT01_RS12365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS12385 SM01234 AT01_RS12385 AT01_RS12405 SM00382 ATPases associated with a variety of cellular activities AT01_RS12405 SM00760 Bacterial dnaA protein helix-turn-helix domain AT01_RS12410 SM00480 DNA polymerase III beta subunit AT01_RS12420 SM00387 Histidine kinase-like ATPases AT01_RS12420 SM00433 TopoisomeraseII AT01_RS12550 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS12560 SM00966 SpoVT / AbrB like domain AT01_RS12575 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AT01_RS12575 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS12575 SM01358 AT01_RS12575 AT01_RS12590 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AT01_RS12680 SM00382 ATPases associated with a variety of cellular activities AT01_RS12690 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS12735 SM00778 Zinc-binding domain of primase-helicase AT01_RS12735 SM00885 D5 N terminal like AT01_RS12745 SM00869 Autotransporter beta-domain AT01_RS12780 SM00421 helix_turn_helix, Lux Regulon AT01_RS12780 SM00448 cheY-homologous receiver domain AT01_RS12785 SM00387 Histidine kinase-like ATPases AT01_RS12815 SM00382 ATPases associated with a variety of cellular activities AT01_RS12820 SM00382 ATPases associated with a variety of cellular activities AT01_RS12865 SM00028 Tetratricopeptide repeats AT01_RS12870 SM00052 Putative diguanylate phosphodiesterase AT01_RS12895 SM00052 Putative diguanylate phosphodiesterase AT01_RS12915 SM00710 Parallel beta-helix repeats AT01_RS12915 SM00869 Autotransporter beta-domain AT01_RS12950 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AT01_RS13035 SM00354 helix_turn _helix lactose operon repressor AT01_RS13055 SM00859 Semialdehyde dehydrogenase, NAD binding domain AT01_RS13075 SM00382 ATPases associated with a variety of cellular activities AT01_RS13105 SM00642 Alpha-amylase domain AT01_RS13110 SM00642 Alpha-amylase domain AT01_RS13135 SM00420 helix_turn_helix, Deoxyribose operon repressor AT01_RS13135 SM01134 AT01_RS13135 AT01_RS13145 SM00450 Rhodanese Homology Domain AT01_RS13155 SM00421 helix_turn_helix, Lux Regulon AT01_RS13200 SM00899 AT01_RS13200 AT01_RS13205 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS13205 SM00732 Likely ribonuclease with RNase H fold. AT01_RS13225 SM00448 cheY-homologous receiver domain AT01_RS13225 SM00862 Transcriptional regulatory protein, C terminal AT01_RS13230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS13230 SM00387 Histidine kinase-like ATPases AT01_RS13230 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS13245 SM00363 S4 RNA-binding domain AT01_RS13370 SM00354 helix_turn _helix lactose operon repressor AT01_RS13400 SM00100 Cyclic nucleotide-monophosphate binding domain AT01_RS13400 SM00419 helix_turn_helix, cAMP Regulatory protein AT01_RS13445 SM00382 ATPases associated with a variety of cellular activities AT01_RS13510 SM00838 Elongation factor G C-terminus AT01_RS13510 SM00889 Elongation factor G, domain IV AT01_RS13530 SM01403 AT01_RS13530 AT01_RS13550 SM01382 AT01_RS13550 AT01_RS13550 SM01383 AT01_RS13550 AT01_RS13565 SM00322 K homology RNA-binding domain AT01_RS13585 SM01374 AT01_RS13585 AT01_RS13590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AT01_RS13655 SM00363 S4 RNA-binding domain AT01_RS13655 SM01390 AT01_RS13655 AT01_RS13660 SM00662 RNA polymerases D AT01_RS13675 SM00422 helix_turn_helix, mercury resistance AT01_RS13900 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS13980 SM00421 helix_turn_helix, Lux Regulon AT01_RS13980 SM00448 cheY-homologous receiver domain AT01_RS13985 SM00387 Histidine kinase-like ATPases AT01_RS13985 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS13985 SM00448 cheY-homologous receiver domain AT01_RS13990 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS14010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS14015 SM00382 ATPases associated with a variety of cellular activities AT01_RS14075 SM00382 ATPases associated with a variety of cellular activities AT01_RS14105 SM00869 Autotransporter beta-domain AT01_RS14205 SM00883 Chaperonin 10 Kd subunit AT01_RS14225 SM00841 Elongation factor P, C-terminal AT01_RS14225 SM01185 AT01_RS14225 AT01_RS14285 SM00479 AT01_RS14285 AT01_RS14320 SM00257 Lysin motif AT01_RS14320 SM00646 AT01_RS14320 AT01_RS14325 SM00853 MutL C terminal dimerisation domain AT01_RS14325 SM01340 AT01_RS14325 AT01_RS14345 SM00244 prohibitin homologues AT01_RS14350 SM00244 prohibitin homologues AT01_RS14360 SM00788 Adenylosuccinate synthetase AT01_RS14370 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS14370 SM00357 Cold shock protein domain AT01_RS14370 SM00955 AT01_RS14370 AT01_RS14375 SM00967 RNA 2'-O ribose methyltransferase substrate binding AT01_RS14460 SM01091 Transporter associated domain AT01_RS14555 SM00387 Histidine kinase-like ATPases AT01_RS14555 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS14560 SM00448 cheY-homologous receiver domain AT01_RS14560 SM00862 Transcriptional regulatory protein, C terminal AT01_RS14575 SM01103 AT01_RS14575 AT01_RS14585 SM00382 ATPases associated with a variety of cellular activities AT01_RS14620 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS14620 SM00322 K homology RNA-binding domain AT01_RS14640 SM01387 AT01_RS14640 AT01_RS14645 SM00316 Ribosomal protein S1-like RNA-binding domain AT01_RS14645 SM00322 K homology RNA-binding domain AT01_RS14650 SM00028 Tetratricopeptide repeats AT01_RS14655 SM00487 DEAD-like helicases superfamily AT01_RS14655 SM00490 helicase superfamily c-terminal domain AT01_RS14710 SM00859 Semialdehyde dehydrogenase, NAD binding domain AT01_RS14720 SM00072 Guanylate kinase homologues. AT01_RS14730 SM00382 ATPases associated with a variety of cellular activities AT01_RS14735 SM00382 ATPases associated with a variety of cellular activities AT01_RS14760 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS14760 SM00866 AT01_RS14760 AT01_RS14795 SM00382 ATPases associated with a variety of cellular activities AT01_RS14800 SM00382 ATPases associated with a variety of cellular activities AT01_RS14890 SM00487 DEAD-like helicases superfamily AT01_RS14915 SM00912 haemagglutination activity domain AT01_RS14925 SM00869 Autotransporter beta-domain AT01_RS14945 SM00421 helix_turn_helix, Lux Regulon AT01_RS14980 SM01133 AT01_RS14980 AT01_RS15000 SM00382 ATPases associated with a variety of cellular activities AT01_RS15080 SM01120 AT01_RS15080 AT01_RS15120 SM00091 PAS domain AT01_RS15125 SM00354 helix_turn _helix lactose operon repressor AT01_RS15130 SM00640 Glycosyl hydrolases family 32 AT01_RS15155 SM00267 diguanylate cyclase AT01_RS15210 SM00749 bacterial OsmY and nodulation domain AT01_RS15230 SM01133 AT01_RS15230 AT01_RS15235 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AT01_RS15260 SM00382 ATPases associated with a variety of cellular activities AT01_RS15265 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS15280 SM01007 Class II Aldolase and Adducin N-terminal domain AT01_RS15295 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS15300 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS15310 SM00382 ATPases associated with a variety of cellular activities AT01_RS15315 SM00831 Cation transporter/ATPase, N-terminus AT01_RS15335 SM00855 Phosphoglycerate mutase family AT01_RS15340 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS15340 SM00871 Bacterial transcription activator, effector binding domain AT01_RS15350 SM00448 cheY-homologous receiver domain AT01_RS15350 SM00862 Transcriptional regulatory protein, C terminal AT01_RS15390 SM00852 Probable molybdopterin binding domain AT01_RS15410 SM00271 DnaJ molecular chaperone homology domain AT01_RS15430 SM00904 Riboflavin kinase AT01_RS15460 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AT01_RS15465 SM00851 MGS-like domain AT01_RS15465 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AT01_RS15500 SM00650 Ribosomal RNA adenine dimethylases AT01_RS15520 SM00271 DnaJ molecular chaperone homology domain AT01_RS15555 SM00634 Bacterial Ig-like domain (group 1) AT01_RS15585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS15585 SM00387 Histidine kinase-like ATPases AT01_RS15585 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS15590 SM00448 cheY-homologous receiver domain AT01_RS15590 SM00862 Transcriptional regulatory protein, C terminal AT01_RS15610 SM00487 DEAD-like helicases superfamily AT01_RS15610 SM00490 helicase superfamily c-terminal domain AT01_RS15615 SM00486 DNA polymerase type-B family AT01_RS15625 SM00382 ATPases associated with a variety of cellular activities AT01_RS15685 SM01329 AT01_RS15685 AT01_RS15690 SM00917 LeuA allosteric (dimerisation) domain AT01_RS15715 SM00354 helix_turn _helix lactose operon repressor AT01_RS15790 SM00842 Cell division protein FtsA AT01_RS15795 SM00864 Tubulin/FtsZ family, GTPase domain AT01_RS15795 SM00865 Tubulin/FtsZ family, C-terminal domain AT01_RS15815 SM00957 SecA DEAD-like domain AT01_RS15815 SM00958 SecA preprotein cross-linking domain AT01_RS15840 SM01240 AT01_RS15840 AT01_RS15865 SM00644 AT01_RS15865 AT01_RS15875 SM00634 Bacterial Ig-like domain (group 1) AT01_RS15895 SM00345 helix_turn_helix gluconate operon transcriptional repressor AT01_RS15895 SM00895 AT01_RS15895 AT01_RS15920 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS15975 SM00947 Carbonic anhydrase AT01_RS15980 SM00382 ATPases associated with a variety of cellular activities AT01_RS16045 SM00487 DEAD-like helicases superfamily AT01_RS16045 SM00490 helicase superfamily c-terminal domain AT01_RS16045 SM00847 Helicase associated domain (HA2) Add an annotation AT01_RS16055 SM00382 ATPases associated with a variety of cellular activities AT01_RS16105 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AT01_RS16110 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AT01_RS16115 SM00073 Histidine Phosphotransfer domain AT01_RS16115 SM00448 cheY-homologous receiver domain AT01_RS16125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS16125 SM00387 Histidine kinase-like ATPases AT01_RS16125 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS16135 SM00954 Region found in RelA / SpoT proteins AT01_RS16150 SM01192 AT01_RS16150 AT01_RS16150 SM01193 AT01_RS16150 AT01_RS16230 SM00382 ATPases associated with a variety of cellular activities AT01_RS16240 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS16240 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AT01_RS16275 SM00257 Lysin motif AT01_RS16285 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AT01_RS16285 SM00534 ATPase domain of DNA mismatch repair MUTS family AT01_RS16360 SM00382 ATPases associated with a variety of cellular activities AT01_RS16370 SM00382 ATPases associated with a variety of cellular activities AT01_RS16380 SM00825 Beta-ketoacyl synthase AT01_RS16395 SM00822 AT01_RS16395 AT01_RS16400 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS16410 SM00869 Autotransporter beta-domain AT01_RS16420 SM00838 Elongation factor G C-terminus AT01_RS16420 SM00889 Elongation factor G, domain IV AT01_RS16425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AT01_RS16435 SM00420 helix_turn_helix, Deoxyribose operon repressor AT01_RS16435 SM01134 AT01_RS16435 AT01_RS16460 SM01007 Class II Aldolase and Adducin N-terminal domain AT01_RS16470 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AT01_RS16505 SM00382 ATPases associated with a variety of cellular activities AT01_RS16515 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AT01_RS16565 SM01091 Transporter associated domain AT01_RS16575 SM00382 ATPases associated with a variety of cellular activities AT01_RS16575 SM00962 SRP54-type protein, GTPase domain AT01_RS16575 SM00963 SRP54-type protein, helical bundle domain AT01_RS16610 SM00448 cheY-homologous receiver domain AT01_RS16610 SM00850 LytTr DNA-binding domain AT01_RS16620 SM00830 Chorismate mutase type II AT01_RS16625 SM00830 Chorismate mutase type II AT01_RS16640 SM00363 S4 RNA-binding domain AT01_RS16650 SM00382 ATPases associated with a variety of cellular activities AT01_RS16650 SM01086 C-terminal, D2-small domain, of ClpB protein AT01_RS16695 SM00563 Phosphate acyltransferases AT01_RS16750 SM00825 Beta-ketoacyl synthase AT01_RS16760 SM00822 AT01_RS16760 AT01_RS16765 SM00825 Beta-ketoacyl synthase AT01_RS16775 SM00869 Autotransporter beta-domain AT01_RS16780 SM00257 Lysin motif AT01_RS16785 SM00849 Metallo-beta-lactamase superfamily AT01_RS16800 SM00479 AT01_RS16800 AT01_RS16830 SM00382 ATPases associated with a variety of cellular activities AT01_RS16870 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS16895 SM00357 Cold shock protein domain AT01_RS16920 SM00382 ATPases associated with a variety of cellular activities AT01_RS16925 SM00382 ATPases associated with a variety of cellular activities AT01_RS16945 SM00988 UreE urease accessory protein, N-terminal domain AT01_RS17020 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS17035 SM00778 Zinc-binding domain of primase-helicase AT01_RS17035 SM00885 D5 N terminal like AT01_RS17120 SM00986 Uracil DNA glycosylase superfamily AT01_RS17120 SM00987 UreE urease accessory protein, C-terminal domain AT01_RS17150 SM00248 ankyrin repeats AT01_RS17155 SM00487 DEAD-like helicases superfamily AT01_RS17155 SM00490 helicase superfamily c-terminal domain AT01_RS17205 SM00358 Double-stranded RNA binding motif AT01_RS17205 SM00535 Ribonuclease III family AT01_RS17265 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS17270 SM01211 AT01_RS17270 AT01_RS17285 SM00387 Histidine kinase-like ATPases AT01_RS17285 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS17295 SM00382 ATPases associated with a variety of cellular activities AT01_RS17295 SM00448 cheY-homologous receiver domain AT01_RS17305 SM00938 Nitrogen regulatory protein P-II AT01_RS17400 SM00271 DnaJ molecular chaperone homology domain AT01_RS17430 SM01359 AT01_RS17430 AT01_RS17430 SM01360 AT01_RS17430 AT01_RS17440 SM00247 Beta/gamma crystallins AT01_RS17445 SM00562 AT01_RS17445 AT01_RS17455 SM00028 Tetratricopeptide repeats AT01_RS17460 SM00530 Helix-turn-helix XRE-family like proteins AT01_RS17480 SM00564 beta-propeller repeat AT01_RS17505 SM00116 Domain in cystathionine beta-synthase and other proteins. AT01_RS17505 SM01240 AT01_RS17505 AT01_RS17555 SM00116 Domain in cystathionine beta-synthase and other proteins. AT01_RS17560 SM00420 helix_turn_helix, Deoxyribose operon repressor AT01_RS17560 SM01134 AT01_RS17560 AT01_RS17590 SM00046 Diacylglycerol kinase catalytic domain (presumed) AT01_RS17605 SM00448 cheY-homologous receiver domain AT01_RS17605 SM00862 Transcriptional regulatory protein, C terminal AT01_RS17610 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS17610 SM00387 Histidine kinase-like ATPases AT01_RS17610 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS17665 SM00052 Putative diguanylate phosphodiesterase AT01_RS17665 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AT01_RS17665 SM00091 PAS domain AT01_RS17665 SM00267 diguanylate cyclase AT01_RS17670 SM00924 MgtE intracellular N domain AT01_RS17700 SM00382 ATPases associated with a variety of cellular activities AT01_RS17760 SM01130 AT01_RS17760 AT01_RS17825 SM00421 helix_turn_helix, Lux Regulon AT01_RS17825 SM00448 cheY-homologous receiver domain AT01_RS17840 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AT01_RS17860 SM00919 Malic enzyme, NAD binding domain AT01_RS17860 SM01274 AT01_RS17860 AT01_RS17910 SM00382 ATPases associated with a variety of cellular activities AT01_RS17925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AT01_RS17925 SM00387 Histidine kinase-like ATPases AT01_RS17925 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS17955 SM00771 ZipA, C-terminal domain (FtsZ-binding) AT01_RS17960 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AT01_RS17960 SM00292 breast cancer carboxy-terminal domain AT01_RS17960 SM00532 Ligase N family AT01_RS18060 SM00448 cheY-homologous receiver domain AT01_RS18060 SM00850 LytTr DNA-binding domain AT01_RS18065 SM00387 Histidine kinase-like ATPases AT01_RS18115 SM00382 ATPases associated with a variety of cellular activities AT01_RS18160 SM00382 ATPases associated with a variety of cellular activities AT01_RS18195 SM00867 YceI-like domain AT01_RS18270 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AT01_RS18305 SM00421 helix_turn_helix, Lux Regulon AT01_RS18310 SM00421 helix_turn_helix, Lux Regulon AT01_RS18320 SM00382 ATPases associated with a variety of cellular activities AT01_RS18330 SM00421 helix_turn_helix, Lux Regulon AT01_RS18355 SM00421 helix_turn_helix, Lux Regulon AT01_RS18365 SM00357 Cold shock protein domain AT01_RS18375 SM00267 diguanylate cyclase AT01_RS18385 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS18400 SM00936 Penicillin-binding protein 5, C-terminal domain AT01_RS18455 SM00382 ATPases associated with a variety of cellular activities AT01_RS18470 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS18485 SM00116 Domain in cystathionine beta-synthase and other proteins. AT01_RS18485 SM01091 Transporter associated domain AT01_RS18500 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS18585 SM01081 Putative carbohydrate binding domain AT01_RS18600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AT01_RS18630 SM00448 cheY-homologous receiver domain AT01_RS18630 SM00862 Transcriptional regulatory protein, C terminal AT01_RS18635 SM00387 Histidine kinase-like ATPases AT01_RS18635 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS18685 SM00796 Allophanate hydrolase subunit 1 AT01_RS18690 SM00797 Allophanate hydrolase subunit 2 AT01_RS18740 SM00861 Transketolase, pyrimidine binding domain AT01_RS18755 SM00881 CoA binding domain AT01_RS18855 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS18855 SM00387 Histidine kinase-like ATPases AT01_RS18855 SM00388 His Kinase A (phosphoacceptor) domain AT01_RS18855 SM00448 cheY-homologous receiver domain AT01_RS18860 SM00421 helix_turn_helix, Lux Regulon AT01_RS18860 SM00448 cheY-homologous receiver domain AT01_RS18870 SM00855 Phosphoglycerate mutase family AT01_RS18905 SM00382 ATPases associated with a variety of cellular activities AT01_RS18930 SM00382 ATPases associated with a variety of cellular activities AT01_RS18950 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS18950 SM00876 Biotin and Thiamin Synthesis associated domain AT01_RS18970 SM00382 ATPases associated with a variety of cellular activities AT01_RS18975 SM00487 DEAD-like helicases superfamily AT01_RS18975 SM00490 helicase superfamily c-terminal domain AT01_RS19000 SM00382 ATPases associated with a variety of cellular activities AT01_RS19010 SM00729 Elongator protein 3, MiaB family, Radical SAM AT01_RS19045 SM00382 ATPases associated with a variety of cellular activities AT01_RS19060 SM00487 DEAD-like helicases superfamily AT01_RS19060 SM00490 helicase superfamily c-terminal domain AT01_RS19090 SM00507 HNH nucleases AT01_RS19105 SM00382 ATPases associated with a variety of cellular activities AT01_RS19135 SM00450 Rhodanese Homology Domain AT01_RS19155 SM00382 ATPases associated with a variety of cellular activities AT01_RS19185 SM00487 DEAD-like helicases superfamily AT01_RS19185 SM00488 AT01_RS19185 AT01_RS19185 SM00491 AT01_RS19185 AT01_RS19205 SM00382 ATPases associated with a variety of cellular activities AT01_RS19215 SM00062 Bacterial periplasmic substrate-binding proteins AT01_RS19215 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AT01_RS19270 SM00382 ATPases associated with a variety of cellular activities AT01_RS19275 SM00495 Chitin-binding domain type 3 AT01_RS19275 SM01276 AT01_RS19275 AT01_RS19290 SM00852 Probable molybdopterin binding domain AT01_RS19305 SM00382 ATPases associated with a variety of cellular activities AT01_RS19340 SM00829 Enoylreductase AT01_RS19365 SM00354 helix_turn _helix lactose operon repressor AT01_RS19375 SM00382 ATPases associated with a variety of cellular activities AT01_RS19385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AT01_RS19385 SM00382 ATPases associated with a variety of cellular activities AT01_RS19390 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AT01_RS19470 SM00919 Malic enzyme, NAD binding domain AT01_RS19470 SM01274 AT01_RS19470 AT01_RS19540 SM01091 Transporter associated domain AT01_RS19560 SM00382 ATPases associated with a variety of cellular activities AT01_RS19640 SM01350 AT01_RS19640 AT01_RS19695 SM00382 ATPases associated with a variety of cellular activities AT01_RS19745 SM00382 ATPases associated with a variety of cellular activities AT01_RS19785 SM00877 AT01_RS19785 AT01_RS19790 SM00877 AT01_RS19790 AT01_RS19830 SM00877 AT01_RS19830 AT01_RS19835 SM00877 AT01_RS19835 AT01_RS19865 SM00877 AT01_RS19865 AT01_RS19870 SM00877 AT01_RS19870 AT01_RS19880 SM00342 helix_turn_helix, arabinose operon control protein AT01_RS19960 SM00382 ATPases associated with a variety of cellular activities AT01_RS19980 SM00855 Phosphoglycerate mutase family AT01_RS19995 SM00421 helix_turn_helix, Lux Regulon AT01_RS20040 SM00382 ATPases associated with a variety of cellular activities AT01_RS20040 SM01086 C-terminal, D2-small domain, of ClpB protein AT01_RS20200 SM00257 Lysin motif AT01_RS20200 SM00634 Bacterial Ig-like domain (group 1) AT01_RS20205 SM00869 Autotransporter beta-domain AT01_RS20260 SM00292 breast cancer carboxy-terminal domain AT01_RS20270 SM00421 helix_turn_helix, Lux Regulon AT01_RS20310 SM00862 Transcriptional regulatory protein, C terminal AT01_RS20325 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor