XM56_RS00005 SM00382 ATPases associated with a variety of cellular activities XM56_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain XM56_RS00010 SM00480 DNA polymerase III beta subunit XM56_RS00020 SM00387 Histidine kinase-like ATPases XM56_RS00020 SM00433 TopoisomeraseII XM56_RS00070 SM00642 Alpha-amylase domain XM56_RS00150 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS00160 SM00966 SpoVT / AbrB like domain XM56_RS00175 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS00175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS00175 SM01358 XM56_RS00175 XM56_RS00190 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XM56_RS00235 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS00265 SM00382 ATPases associated with a variety of cellular activities XM56_RS00275 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS00305 SM00382 ATPases associated with a variety of cellular activities XM56_RS00380 SM00354 helix_turn _helix lactose operon repressor XM56_RS00415 SM00912 haemagglutination activity domain XM56_RS00430 SM00912 haemagglutination activity domain XM56_RS00445 SM00387 Histidine kinase-like ATPases XM56_RS00450 SM00421 helix_turn_helix, Lux Regulon XM56_RS00450 SM00448 cheY-homologous receiver domain XM56_RS00485 SM00382 ATPases associated with a variety of cellular activities XM56_RS00490 SM00382 ATPases associated with a variety of cellular activities XM56_RS00545 SM00052 Putative diguanylate phosphodiesterase XM56_RS00585 SM00052 Putative diguanylate phosphodiesterase XM56_RS00605 SM00869 Autotransporter beta-domain XM56_RS00635 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase XM56_RS00785 SM00354 helix_turn _helix lactose operon repressor XM56_RS00805 SM00859 Semialdehyde dehydrogenase, NAD binding domain XM56_RS00830 SM00642 Alpha-amylase domain XM56_RS00835 SM00642 Alpha-amylase domain XM56_RS00865 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS00865 SM01134 XM56_RS00865 XM56_RS00875 SM00450 Rhodanese Homology Domain XM56_RS00885 SM00421 helix_turn_helix, Lux Regulon XM56_RS00935 SM00899 XM56_RS00935 XM56_RS00940 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS00940 SM00732 Likely ribonuclease with RNase H fold. XM56_RS00970 SM00448 cheY-homologous receiver domain XM56_RS00970 SM00862 Transcriptional regulatory protein, C terminal XM56_RS00975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS00975 SM00387 Histidine kinase-like ATPases XM56_RS00975 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS00995 SM00363 S4 RNA-binding domain XM56_RS01110 SM00354 helix_turn _helix lactose operon repressor XM56_RS01125 SM00382 ATPases associated with a variety of cellular activities XM56_RS01145 SM00100 Cyclic nucleotide-monophosphate binding domain XM56_RS01145 SM00419 helix_turn_helix, cAMP Regulatory protein XM56_RS01180 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS01185 SM00382 ATPases associated with a variety of cellular activities XM56_RS01210 SM00382 ATPases associated with a variety of cellular activities XM56_RS01275 SM00838 Elongation factor G C-terminus XM56_RS01275 SM00889 Elongation factor G, domain IV XM56_RS01295 SM01403 XM56_RS01295 XM56_RS01315 SM01382 XM56_RS01315 XM56_RS01315 SM01383 XM56_RS01315 XM56_RS01330 SM00322 K homology RNA-binding domain XM56_RS01350 SM01374 XM56_RS01350 XM56_RS01355 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XM56_RS01420 SM00363 S4 RNA-binding domain XM56_RS01420 SM01390 XM56_RS01420 XM56_RS01425 SM00662 RNA polymerases D XM56_RS01440 SM00422 helix_turn_helix, mercury resistance XM56_RS01565 SM00346 helix_turn_helix isocitrate lyase regulation XM56_RS01570 SM01018 B12 binding domain XM56_RS01575 SM00912 haemagglutination activity domain XM56_RS01620 SM00382 ATPases associated with a variety of cellular activities XM56_RS01650 SM00563 Phosphate acyltransferases XM56_RS01695 SM00829 Enoylreductase XM56_RS01700 SM00382 ATPases associated with a variety of cellular activities XM56_RS01705 SM01005 Alanine racemase, C-terminal domain XM56_RS01755 SM00382 ATPases associated with a variety of cellular activities XM56_RS01780 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS01815 SM00382 ATPases associated with a variety of cellular activities XM56_RS01830 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS01850 SM00357 Cold shock protein domain XM56_RS01855 SM00357 Cold shock protein domain XM56_RS01865 SM00267 diguanylate cyclase XM56_RS01895 SM00878 Biotin carboxylase C-terminal domain XM56_RS01920 SM00829 Enoylreductase XM56_RS01925 SM00052 Putative diguanylate phosphodiesterase XM56_RS01925 SM00267 diguanylate cyclase XM56_RS01950 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS02140 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS02150 SM00831 Cation transporter/ATPase, N-terminus XM56_RS02155 SM00354 helix_turn _helix lactose operon repressor XM56_RS02165 SM00642 Alpha-amylase domain XM56_RS02175 SM00460 Transglutaminase/protease-like homologues XM56_RS02230 SM00382 ATPases associated with a variety of cellular activities XM56_RS02260 SM00382 ATPases associated with a variety of cellular activities XM56_RS02295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XM56_RS02300 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XM56_RS02355 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS02360 SM00073 Histidine Phosphotransfer domain XM56_RS02360 SM00091 PAS domain XM56_RS02360 SM00387 Histidine kinase-like ATPases XM56_RS02360 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS02360 SM00448 cheY-homologous receiver domain XM56_RS02375 SM00749 bacterial OsmY and nodulation domain XM56_RS02435 SM00829 Enoylreductase XM56_RS02495 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS02495 SM00895 XM56_RS02495 XM56_RS02515 SM00858 XM56_RS02515 XM56_RS02550 SM00869 Autotransporter beta-domain XM56_RS02560 SM00869 Autotransporter beta-domain XM56_RS02655 SM00400 zinc finger XM56_RS02655 SM00493 XM56_RS02655 XM56_RS02655 SM00766 DNA primase DnaG DnaB-binding XM56_RS02670 SM01207 XM56_RS02670 XM56_RS02675 SM00905 Dihydroneopterin aldolase XM56_RS02685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XM56_RS02690 SM00287 Bacterial SH3 domain homologues XM56_RS02695 SM01118 XM56_RS02695 XM56_RS02765 SM00387 Histidine kinase-like ATPases XM56_RS02765 SM00433 TopoisomeraseII XM56_RS02785 SM00434 DNA Topoisomerase IV XM56_RS02790 SM00563 Phosphate acyltransferases XM56_RS02800 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS02815 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS02930 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS02955 SM00382 ATPases associated with a variety of cellular activities XM56_RS02985 SM00382 ATPases associated with a variety of cellular activities XM56_RS03015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS03060 SM00382 ATPases associated with a variety of cellular activities XM56_RS03085 SM00382 ATPases associated with a variety of cellular activities XM56_RS03110 SM00858 XM56_RS03110 XM56_RS03180 SM00862 Transcriptional regulatory protein, C terminal XM56_RS03310 SM00052 Putative diguanylate phosphodiesterase XM56_RS03310 SM00091 PAS domain XM56_RS03310 SM00267 diguanylate cyclase XM56_RS03355 SM00354 helix_turn _helix lactose operon repressor XM56_RS03405 SM00382 ATPases associated with a variety of cellular activities XM56_RS03525 SM00478 endonuclease III XM56_RS03525 SM00525 XM56_RS03525 XM56_RS03550 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS03560 SM01152 XM56_RS03560 XM56_RS03595 SM00732 Likely ribonuclease with RNase H fold. XM56_RS03620 SM00731 SprT homologues. XM56_RS03625 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XM56_RS03660 SM00861 Transketolase, pyrimidine binding domain XM56_RS03665 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XM56_RS03680 SM00194 Protein tyrosine phosphatase, catalytic domain XM56_RS03680 SM00404 Protein tyrosine phosphatase, catalytic domain motif XM56_RS03860 SM00257 Lysin motif XM56_RS03870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family XM56_RS03870 SM00534 ATPase domain of DNA mismatch repair MUTS family XM56_RS03940 SM00382 ATPases associated with a variety of cellular activities XM56_RS03950 SM00382 ATPases associated with a variety of cellular activities XM56_RS03960 SM00825 Beta-ketoacyl synthase XM56_RS03975 SM00822 XM56_RS03975 XM56_RS03990 SM01235 XM56_RS03990 XM56_RS04000 SM00838 Elongation factor G C-terminus XM56_RS04000 SM00889 Elongation factor G, domain IV XM56_RS04005 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor XM56_RS04045 SM01012 XM56_RS04045 XM56_RS04060 SM00382 ATPases associated with a variety of cellular activities XM56_RS04090 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XM56_RS04125 SM00382 ATPases associated with a variety of cellular activities XM56_RS04135 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XM56_RS04180 SM01091 Transporter associated domain XM56_RS04190 SM00382 ATPases associated with a variety of cellular activities XM56_RS04190 SM00962 SRP54-type protein, GTPase domain XM56_RS04190 SM00963 SRP54-type protein, helical bundle domain XM56_RS04225 SM00448 cheY-homologous receiver domain XM56_RS04225 SM00850 LytTr DNA-binding domain XM56_RS04235 SM00830 Chorismate mutase type II XM56_RS04240 SM00830 Chorismate mutase type II XM56_RS04255 SM00382 ATPases associated with a variety of cellular activities XM56_RS04255 SM01086 C-terminal, D2-small domain, of ClpB protein XM56_RS04265 SM00363 S4 RNA-binding domain XM56_RS04310 SM00155 Phospholipase D. Active site motifs. XM56_RS04315 SM00881 CoA binding domain XM56_RS04320 SM01144 XM56_RS04320 XM56_RS04330 SM00967 RNA 2'-O ribose methyltransferase substrate binding XM56_RS04360 SM00347 helix_turn_helix multiple antibiotic resistance protein XM56_RS04410 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS04425 SM00382 ATPases associated with a variety of cellular activities XM56_RS04455 SM01007 Class II Aldolase and Adducin N-terminal domain XM56_RS04485 SM00710 Parallel beta-helix repeats XM56_RS04525 SM00900 XM56_RS04525 XM56_RS04605 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XM56_RS04615 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS04615 SM00866 XM56_RS04615 XM56_RS04635 SM01068 Putative carbohydrate binding domain XM56_RS04705 SM00448 cheY-homologous receiver domain XM56_RS04705 SM00862 Transcriptional regulatory protein, C terminal XM56_RS04710 SM00091 PAS domain XM56_RS04710 SM00387 Histidine kinase-like ATPases XM56_RS04710 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS04730 SM00642 Alpha-amylase domain XM56_RS04780 SM01323 XM56_RS04780 XM56_RS04845 SM00861 Transketolase, pyrimidine binding domain XM56_RS04860 SM00981 XM56_RS04860 XM56_RS04945 SM00382 ATPases associated with a variety of cellular activities XM56_RS04945 SM00994 ClpX C4-type zinc finger XM56_RS04945 SM01086 C-terminal, D2-small domain, of ClpB protein XM56_RS04950 SM00382 ATPases associated with a variety of cellular activities XM56_RS04950 SM00464 Found in ATP-dependent protease La (LON) XM56_RS04955 SM00411 bacterial (prokaryotic) histone like domain XM56_RS04965 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XM56_RS04995 SM00344 helix_turn_helix ASNC type XM56_RS05000 SM00382 ATPases associated with a variety of cellular activities XM56_RS05005 SM00382 ATPases associated with a variety of cellular activities XM56_RS05010 SM00938 Nitrogen regulatory protein P-II XM56_RS05050 SM00382 ATPases associated with a variety of cellular activities XM56_RS05150 SM00382 ATPases associated with a variety of cellular activities XM56_RS05160 SM00493 XM56_RS05160 XM56_RS05165 SM00387 Histidine kinase-like ATPases XM56_RS05265 SM00422 helix_turn_helix, mercury resistance XM56_RS05275 SM00244 prohibitin homologues XM56_RS05285 SM00822 XM56_RS05285 XM56_RS05295 SM00382 ATPases associated with a variety of cellular activities XM56_RS05310 SM01001 AIR carboxylase XM56_RS05325 SM00840 XM56_RS05325 XM56_RS05350 SM00382 ATPases associated with a variety of cellular activities XM56_RS05365 SM00448 cheY-homologous receiver domain XM56_RS05365 SM00862 Transcriptional regulatory protein, C terminal XM56_RS05385 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XM56_RS05400 SM00382 ATPases associated with a variety of cellular activities XM56_RS05425 SM00421 helix_turn_helix, Lux Regulon XM56_RS05435 SM00357 Cold shock protein domain XM56_RS05445 SM00267 diguanylate cyclase XM56_RS05455 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS05470 SM00936 Penicillin-binding protein 5, C-terminal domain XM56_RS05525 SM00382 ATPases associated with a variety of cellular activities XM56_RS05540 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS05555 SM00116 Domain in cystathionine beta-synthase and other proteins. XM56_RS05555 SM01091 Transporter associated domain XM56_RS05570 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS05650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS05685 SM00448 cheY-homologous receiver domain XM56_RS05685 SM00862 Transcriptional regulatory protein, C terminal XM56_RS05690 SM00387 Histidine kinase-like ATPases XM56_RS05690 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS05755 SM00796 Allophanate hydrolase subunit 1 XM56_RS05760 SM00797 Allophanate hydrolase subunit 2 XM56_RS05810 SM00861 Transketolase, pyrimidine binding domain XM56_RS05825 SM00881 CoA binding domain XM56_RS05925 SM00855 Phosphoglycerate mutase family XM56_RS05930 SM00477 DNA/RNA non-specific endonuclease XM56_RS05930 SM00892 DNA/RNA non-specific endonuclease XM56_RS05975 SM00382 ATPases associated with a variety of cellular activities XM56_RS06005 SM00487 DEAD-like helicases superfamily XM56_RS06015 SM00990 XM56_RS06015 XM56_RS06025 SM00482 DNA polymerase A domain XM56_RS06055 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS06060 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS06190 SM00382 ATPases associated with a variety of cellular activities XM56_RS06210 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS06210 SM00876 Biotin and Thiamin Synthesis associated domain XM56_RS06230 SM00382 ATPases associated with a variety of cellular activities XM56_RS06235 SM00487 DEAD-like helicases superfamily XM56_RS06235 SM00490 helicase superfamily c-terminal domain XM56_RS06250 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS06285 SM00382 ATPases associated with a variety of cellular activities XM56_RS06300 SM00487 DEAD-like helicases superfamily XM56_RS06300 SM00490 helicase superfamily c-terminal domain XM56_RS06315 SM00116 Domain in cystathionine beta-synthase and other proteins. XM56_RS06330 SM01118 XM56_RS06330 XM56_RS06335 SM00507 HNH nucleases XM56_RS06350 SM00382 ATPases associated with a variety of cellular activities XM56_RS06395 SM00382 ATPases associated with a variety of cellular activities XM56_RS06400 SM00450 Rhodanese Homology Domain XM56_RS06425 SM00382 ATPases associated with a variety of cellular activities XM56_RS06470 SM00487 DEAD-like helicases superfamily XM56_RS06470 SM00488 XM56_RS06470 XM56_RS06470 SM00491 XM56_RS06470 XM56_RS06495 SM00903 Flavin reductase like domain XM56_RS06505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS06505 SM00091 PAS domain XM56_RS06505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS06510 SM00382 ATPases associated with a variety of cellular activities XM56_RS06520 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS06520 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XM56_RS06550 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. XM56_RS06590 SM00382 ATPases associated with a variety of cellular activities XM56_RS06605 SM00852 Probable molybdopterin binding domain XM56_RS06620 SM00382 ATPases associated with a variety of cellular activities XM56_RS06645 SM00829 Enoylreductase XM56_RS06670 SM00354 helix_turn _helix lactose operon repressor XM56_RS06680 SM00382 ATPases associated with a variety of cellular activities XM56_RS06690 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XM56_RS06690 SM00382 ATPases associated with a variety of cellular activities XM56_RS06695 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XM56_RS06775 SM00919 Malic enzyme, NAD binding domain XM56_RS06775 SM01274 XM56_RS06775 XM56_RS06850 SM01091 Transporter associated domain XM56_RS06890 SM00382 ATPases associated with a variety of cellular activities XM56_RS06915 SM01350 XM56_RS06915 XM56_RS06975 SM00382 ATPases associated with a variety of cellular activities XM56_RS07025 SM00382 ATPases associated with a variety of cellular activities XM56_RS07060 SM00877 XM56_RS07060 XM56_RS07065 SM00877 XM56_RS07065 XM56_RS07105 SM00877 XM56_RS07105 XM56_RS07110 SM00877 XM56_RS07110 XM56_RS07140 SM00877 XM56_RS07140 XM56_RS07145 SM00877 XM56_RS07145 XM56_RS07155 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS07235 SM00382 ATPases associated with a variety of cellular activities XM56_RS07255 SM00855 Phosphoglycerate mutase family XM56_RS07275 SM00421 helix_turn_helix, Lux Regulon XM56_RS07320 SM00382 ATPases associated with a variety of cellular activities XM56_RS07320 SM01086 C-terminal, D2-small domain, of ClpB protein XM56_RS07430 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS07430 SM01134 XM56_RS07430 XM56_RS07440 SM00260 Two component signalling adaptor domain XM56_RS07440 SM00448 cheY-homologous receiver domain XM56_RS07450 SM00822 XM56_RS07450 XM56_RS07470 SM00382 ATPases associated with a variety of cellular activities XM56_RS07490 SM00387 Histidine kinase-like ATPases XM56_RS07495 SM00421 helix_turn_helix, Lux Regulon XM56_RS07495 SM00448 cheY-homologous receiver domain XM56_RS07500 SM00448 cheY-homologous receiver domain XM56_RS07505 SM00091 PAS domain XM56_RS07505 SM00387 Histidine kinase-like ATPases XM56_RS07630 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS07630 SM00387 Histidine kinase-like ATPases XM56_RS07630 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS07630 SM00448 cheY-homologous receiver domain XM56_RS07635 SM00421 helix_turn_helix, Lux Regulon XM56_RS07635 SM00448 cheY-homologous receiver domain XM56_RS07710 SM00344 helix_turn_helix ASNC type XM56_RS07720 SM00829 Enoylreductase XM56_RS07730 SM01038 Beta galactosidase small chain XM56_RS07735 SM00354 helix_turn _helix lactose operon repressor XM56_RS07740 SM00357 Cold shock protein domain XM56_RS07750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS07750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS07770 SM00831 Cation transporter/ATPase, N-terminus XM56_RS07775 SM00829 Enoylreductase XM56_RS07805 SM00073 Histidine Phosphotransfer domain XM56_RS07805 SM00260 Two component signalling adaptor domain XM56_RS07805 SM00387 Histidine kinase-like ATPases XM56_RS07805 SM01231 XM56_RS07805 XM56_RS07810 SM00260 Two component signalling adaptor domain XM56_RS07815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS07815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS07815 SM00319 Homologues of the ligand binding domain of Tar XM56_RS07820 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS07820 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS07820 SM00319 Homologues of the ligand binding domain of Tar XM56_RS07825 SM00138 Methyltransferase, chemotaxis proteins XM56_RS07830 SM00448 cheY-homologous receiver domain XM56_RS07835 SM00448 cheY-homologous receiver domain XM56_RS07865 SM00634 Bacterial Ig-like domain (group 1) XM56_RS07880 SM00858 XM56_RS07880 XM56_RS07925 SM00047 Lysozyme subfamily 2 XM56_RS07985 SM00382 ATPases associated with a variety of cellular activities XM56_RS08040 SM00478 endonuclease III XM56_RS08045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XM56_RS08050 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS08100 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS08100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XM56_RS08110 SM00382 ATPases associated with a variety of cellular activities XM56_RS08170 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS08175 SM00612 XM56_RS08175 XM56_RS08190 SM00903 Flavin reductase like domain XM56_RS08265 SM00642 Alpha-amylase domain XM56_RS08285 SM00421 helix_turn_helix, Lux Regulon XM56_RS08285 SM00448 cheY-homologous receiver domain XM56_RS08290 SM00465 GIY-YIG type nucleases (URI domain) XM56_RS08500 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS08580 SM01400 XM56_RS08580 XM56_RS08600 SM00937 XM56_RS08600 XM56_RS08630 SM00267 diguanylate cyclase XM56_RS08655 SM00481 DNA polymerase alpha chain like domain XM56_RS08725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS08725 SM00387 Histidine kinase-like ATPases XM56_RS08740 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS08800 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS08800 SM00866 XM56_RS08800 XM56_RS08825 SM00869 Autotransporter beta-domain XM56_RS08840 SM00257 Lysin motif XM56_RS08880 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS08880 SM01134 XM56_RS08880 XM56_RS08900 SM00363 S4 RNA-binding domain XM56_RS08970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XM56_RS08975 SM00382 ATPases associated with a variety of cellular activities XM56_RS08990 SM00382 ATPases associated with a variety of cellular activities XM56_RS09000 SM00257 Lysin motif XM56_RS09055 SM00487 DEAD-like helicases superfamily XM56_RS09055 SM00491 XM56_RS09055 XM56_RS09075 SM00341 Helicase and RNase D C-terminal XM56_RS09075 SM00474 3'-5' exonuclease XM56_RS09160 SM01022 XM56_RS09160 XM56_RS09170 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS09170 SM00091 PAS domain XM56_RS09170 SM00267 diguanylate cyclase XM56_RS09175 SM00972 Spore Coat Protein U domain XM56_RS09190 SM00972 Spore Coat Protein U domain XM56_RS09195 SM00972 Spore Coat Protein U domain XM56_RS09200 SM00972 Spore Coat Protein U domain XM56_RS09225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XM56_RS09230 SM00945 ProQ/FINO family XM56_RS09235 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XM56_RS09235 SM00245 tail specific protease XM56_RS09260 SM00346 helix_turn_helix isocitrate lyase regulation XM56_RS09265 SM00644 XM56_RS09265 XM56_RS09295 SM00382 ATPases associated with a variety of cellular activities XM56_RS09380 SM00382 ATPases associated with a variety of cellular activities XM56_RS09430 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain XM56_RS09455 SM00873 B3/4 domain XM56_RS09455 SM00874 tRNA synthetase B5 domain XM56_RS09455 SM00896 Ferredoxin-fold anticodon binding domain XM56_RS09460 SM00411 bacterial (prokaryotic) histone like domain XM56_RS09485 SM00382 ATPases associated with a variety of cellular activities XM56_RS09605 SM00382 ATPases associated with a variety of cellular activities XM56_RS09670 SM00354 helix_turn _helix lactose operon repressor XM56_RS09690 SM00479 XM56_RS09690 XM56_RS09740 SM00347 helix_turn_helix multiple antibiotic resistance protein XM56_RS09765 SM00363 S4 RNA-binding domain XM56_RS09815 SM00382 ATPases associated with a variety of cellular activities XM56_RS09820 SM00382 ATPases associated with a variety of cellular activities XM56_RS09850 SM00382 ATPases associated with a variety of cellular activities XM56_RS09885 SM00953 XM56_RS09885 XM56_RS09895 SM00091 PAS domain XM56_RS09895 SM00382 ATPases associated with a variety of cellular activities XM56_RS09905 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XM56_RS09930 SM00148 Phospholipase C, catalytic domain (part); domain X XM56_RS09935 SM00890 Domain of unknown function XM56_RS09980 SM00382 ATPases associated with a variety of cellular activities XM56_RS09980 SM00487 DEAD-like helicases superfamily XM56_RS09980 SM00490 helicase superfamily c-terminal domain XM56_RS09980 SM00847 Helicase associated domain (HA2) Add an annotation XM56_RS09990 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS09995 SM00020 Trypsin-like serine protease XM56_RS10010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS10010 SM00387 Histidine kinase-like ATPases XM56_RS10010 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS10015 SM00448 cheY-homologous receiver domain XM56_RS10015 SM00862 Transcriptional regulatory protein, C terminal XM56_RS10040 SM01002 Alanine dehydrogenase/PNT, C-terminal domain XM56_RS10040 SM01003 Alanine dehydrogenase/PNT, N-terminal domain XM56_RS10055 SM00100 Cyclic nucleotide-monophosphate binding domain XM56_RS10055 SM00419 helix_turn_helix, cAMP Regulatory protein XM56_RS10075 SM00871 Bacterial transcription activator, effector binding domain XM56_RS10080 SM00822 XM56_RS10080 XM56_RS10085 SM00098 Alkaline phosphatase homologues XM56_RS10130 SM00644 XM56_RS10130 XM56_RS10170 SM00354 helix_turn _helix lactose operon repressor XM56_RS10185 SM00857 Resolvase, N terminal domain XM56_RS10215 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS10230 SM00344 helix_turn_helix ASNC type XM56_RS10240 SM00347 helix_turn_helix multiple antibiotic resistance protein XM56_RS10280 SM00421 helix_turn_helix, Lux Regulon XM56_RS10445 SM00421 helix_turn_helix, Lux Regulon XM56_RS10470 SM00354 helix_turn _helix lactose operon repressor XM56_RS10500 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS10510 SM00382 ATPases associated with a variety of cellular activities XM56_RS10535 SM00382 ATPases associated with a variety of cellular activities XM56_RS10580 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS10590 SM00900 XM56_RS10590 XM56_RS10600 SM00478 endonuclease III XM56_RS10600 SM00525 XM56_RS10600 XM56_RS10625 SM00357 Cold shock protein domain XM56_RS10625 SM00955 XM56_RS10625 XM56_RS10645 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS10645 SM01134 XM56_RS10645 XM56_RS10655 SM01007 Class II Aldolase and Adducin N-terminal domain XM56_RS10675 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family XM56_RS10690 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS10700 SM00028 Tetratricopeptide repeats XM56_RS10710 SM00014 Acid phosphatase homologues XM56_RS10740 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XM56_RS10740 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XM56_RS10740 SM00493 XM56_RS10740 XM56_RS10755 SM00822 XM56_RS10755 XM56_RS10770 SM00363 S4 RNA-binding domain XM56_RS10780 SM00481 DNA polymerase alpha chain like domain XM56_RS10815 SM00749 bacterial OsmY and nodulation domain XM56_RS10865 SM00052 Putative diguanylate phosphodiesterase XM56_RS10870 SM00155 Phospholipase D. Active site motifs. XM56_RS10880 SM00382 ATPases associated with a variety of cellular activities XM56_RS10885 SM00382 ATPases associated with a variety of cellular activities XM56_RS10930 SM00528 Domain in histone-like proteins of HNS family XM56_RS10935 SM00984 UDP binding domain XM56_RS10940 SM00448 cheY-homologous receiver domain XM56_RS10990 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain XM56_RS10990 SM00437 Bacterial DNA topoisomerase I DNA-binding domain XM56_RS10990 SM00493 XM56_RS10990 XM56_RS11010 SM00870 XM56_RS11010 XM56_RS11035 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain XM56_RS11050 SM00763 PrkA AAA domain XM56_RS11080 SM00052 Putative diguanylate phosphodiesterase XM56_RS11080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XM56_RS11080 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS11080 SM00091 PAS domain XM56_RS11080 SM00267 diguanylate cyclase XM56_RS11090 SM01005 Alanine racemase, C-terminal domain XM56_RS11105 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS11145 SM00836 DALR anticodon binding domain XM56_RS11145 SM01016 Arginyl tRNA synthetase N terminal dom XM56_RS11225 SM00382 ATPases associated with a variety of cellular activities XM56_RS11275 SM01007 Class II Aldolase and Adducin N-terminal domain XM56_RS11285 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS11285 SM01134 XM56_RS11285 XM56_RS11290 SM00387 Histidine kinase-like ATPases XM56_RS11295 SM00448 cheY-homologous receiver domain XM56_RS11355 SM00421 helix_turn_helix, Lux Regulon XM56_RS11430 SM00479 XM56_RS11430 XM56_RS11445 SM01022 XM56_RS11445 XM56_RS11455 SM00487 DEAD-like helicases superfamily XM56_RS11455 SM00490 helicase superfamily c-terminal domain XM56_RS11490 SM01091 Transporter associated domain XM56_RS11525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS11525 SM00091 PAS domain XM56_RS11525 SM00267 diguanylate cyclase XM56_RS11550 SM00357 Cold shock protein domain XM56_RS11595 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS11615 SM00382 ATPases associated with a variety of cellular activities XM56_RS11620 SM00090 RIO-like kinase XM56_RS11635 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS11635 SM00091 PAS domain XM56_RS11635 SM00267 diguanylate cyclase XM56_RS11655 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS11705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS11705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS11715 SM00354 helix_turn _helix lactose operon repressor XM56_RS11720 SM00640 Glycosyl hydrolases family 32 XM56_RS11770 SM01329 XM56_RS11770 XM56_RS11805 SM00448 cheY-homologous receiver domain XM56_RS11805 SM00862 Transcriptional regulatory protein, C terminal XM56_RS11810 SM00387 Histidine kinase-like ATPases XM56_RS11810 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS11815 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. XM56_RS11840 SM00382 ATPases associated with a variety of cellular activities XM56_RS11850 SM00487 DEAD-like helicases superfamily XM56_RS11850 SM00490 helicase superfamily c-terminal domain XM56_RS11850 SM00982 XM56_RS11850 XM56_RS11850 SM01058 CarD-like/TRCF domain XM56_RS11915 SM00382 ATPases associated with a variety of cellular activities XM56_RS11955 SM00825 Beta-ketoacyl synthase XM56_RS11965 SM00822 XM56_RS11965 XM56_RS11970 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. XM56_RS12000 SM00363 S4 RNA-binding domain XM56_RS12005 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS12035 SM00421 helix_turn_helix, Lux Regulon XM56_RS12045 SM00450 Rhodanese Homology Domain XM56_RS12050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XM56_RS12065 SM00387 Histidine kinase-like ATPases XM56_RS12070 SM00421 helix_turn_helix, Lux Regulon XM56_RS12070 SM00448 cheY-homologous receiver domain XM56_RS12140 SM01091 Transporter associated domain XM56_RS12155 SM00421 helix_turn_helix, Lux Regulon XM56_RS12225 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase XM56_RS12230 SM00992 Hemimethylated DNA-binding protein YccV like XM56_RS12235 SM00881 CoA binding domain XM56_RS12245 SM00851 MGS-like domain XM56_RS12305 SM00825 Beta-ketoacyl synthase XM56_RS12325 SM00382 ATPases associated with a variety of cellular activities XM56_RS12330 SM00981 XM56_RS12330 XM56_RS12385 SM00052 Putative diguanylate phosphodiesterase XM56_RS12390 SM00849 Metallo-beta-lactamase superfamily XM56_RS12445 SM00357 Cold shock protein domain XM56_RS12450 SM00357 Cold shock protein domain XM56_RS12455 SM01150 XM56_RS12455 XM56_RS12465 SM00382 ATPases associated with a variety of cellular activities XM56_RS12470 SM00849 Metallo-beta-lactamase superfamily XM56_RS12475 SM00411 bacterial (prokaryotic) histone like domain XM56_RS12480 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS12505 SM00870 XM56_RS12505 XM56_RS12545 SM00382 ATPases associated with a variety of cellular activities XM56_RS12555 SM00843 XM56_RS12555 XM56_RS12560 SM00344 helix_turn_helix ASNC type XM56_RS12570 SM00382 ATPases associated with a variety of cellular activities XM56_RS12575 SM00382 ATPases associated with a variety of cellular activities XM56_RS12585 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS12590 SM00382 ATPases associated with a variety of cellular activities XM56_RS12590 SM01086 C-terminal, D2-small domain, of ClpB protein XM56_RS12600 SM00357 Cold shock protein domain XM56_RS12605 SM00382 ATPases associated with a variety of cellular activities XM56_RS12670 SM00382 ATPases associated with a variety of cellular activities XM56_RS12675 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS12675 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XM56_RS12690 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS12690 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. XM56_RS12715 SM00382 ATPases associated with a variety of cellular activities XM56_RS12750 SM00014 Acid phosphatase homologues XM56_RS12755 SM01133 XM56_RS12755 XM56_RS12760 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS12760 SM01134 XM56_RS12760 XM56_RS12780 SM00936 Penicillin-binding protein 5, C-terminal domain XM56_RS12785 SM00116 Domain in cystathionine beta-synthase and other proteins. XM56_RS12800 SM00382 ATPases associated with a variety of cellular activities XM56_RS12800 SM00930 XM56_RS12800 XM56_RS12830 SM00382 ATPases associated with a variety of cellular activities XM56_RS12870 SM00518 AP endonuclease family 2 XM56_RS12895 SM00862 Transcriptional regulatory protein, C terminal XM56_RS12940 SM00841 Elongation factor P, C-terminal XM56_RS12940 SM01185 XM56_RS12940 XM56_RS12960 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS12960 SM00895 XM56_RS12960 XM56_RS12970 SM00833 Cobalamin synthesis protein cobW C-terminal domain XM56_RS12975 SM00014 Acid phosphatase homologues XM56_RS12990 SM00052 Putative diguanylate phosphodiesterase XM56_RS13010 SM00382 ATPases associated with a variety of cellular activities XM56_RS13025 SM00363 S4 RNA-binding domain XM56_RS13030 SM00487 DEAD-like helicases superfamily XM56_RS13030 SM00490 helicase superfamily c-terminal domain XM56_RS13100 SM01057 Eukaryotic-type carbonic anhydrase XM56_RS13140 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS13155 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS13155 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS13205 SM00387 Histidine kinase-like ATPases XM56_RS13205 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS13210 SM00421 helix_turn_helix, Lux Regulon XM56_RS13210 SM00448 cheY-homologous receiver domain XM56_RS13215 SM00387 Histidine kinase-like ATPases XM56_RS13215 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS13215 SM00448 cheY-homologous receiver domain XM56_RS13225 SM00434 DNA Topoisomerase IV XM56_RS13265 SM00852 Probable molybdopterin binding domain XM56_RS13280 SM01060 XM56_RS13280 XM56_RS13290 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain XM56_RS13410 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XM56_RS13410 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region XM56_RS13415 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region XM56_RS13450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XM56_RS13490 SM00354 helix_turn _helix lactose operon repressor XM56_RS13525 SM00052 Putative diguanylate phosphodiesterase XM56_RS13540 SM00382 ATPases associated with a variety of cellular activities XM56_RS13555 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS13600 SM00859 Semialdehyde dehydrogenase, NAD binding domain XM56_RS13610 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS13625 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS13665 SM00354 helix_turn _helix lactose operon repressor XM56_RS13700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS13700 SM00091 PAS domain XM56_RS13700 SM00267 diguanylate cyclase XM56_RS13705 SM00825 Beta-ketoacyl synthase XM56_RS13745 SM00463 Small MutS-related domain XM56_RS13820 SM00382 ATPases associated with a variety of cellular activities XM56_RS13860 SM00778 Zinc-binding domain of primase-helicase XM56_RS13930 SM00354 helix_turn _helix lactose operon repressor XM56_RS13935 SM00867 YceI-like domain XM56_RS13965 SM00382 ATPases associated with a variety of cellular activities XM56_RS14020 SM00382 ATPases associated with a variety of cellular activities XM56_RS14060 SM00387 Histidine kinase-like ATPases XM56_RS14065 SM00448 cheY-homologous receiver domain XM56_RS14065 SM00850 LytTr DNA-binding domain XM56_RS14165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 XM56_RS14165 SM00292 breast cancer carboxy-terminal domain XM56_RS14165 SM00532 Ligase N family XM56_RS14170 SM00771 ZipA, C-terminal domain (FtsZ-binding) XM56_RS14200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS14200 SM00387 Histidine kinase-like ATPases XM56_RS14200 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS14205 SM00448 cheY-homologous receiver domain XM56_RS14205 SM00862 Transcriptional regulatory protein, C terminal XM56_RS14215 SM00382 ATPases associated with a variety of cellular activities XM56_RS14225 SM00382 ATPases associated with a variety of cellular activities XM56_RS14270 SM01130 XM56_RS14270 XM56_RS14320 SM00919 Malic enzyme, NAD binding domain XM56_RS14320 SM01274 XM56_RS14320 XM56_RS14340 SM00926 Molybdopterin oxidoreductase Fe4S4 domain XM56_RS14355 SM00421 helix_turn_helix, Lux Regulon XM56_RS14355 SM00448 cheY-homologous receiver domain XM56_RS14470 SM01130 XM56_RS14470 XM56_RS14535 SM00382 ATPases associated with a variety of cellular activities XM56_RS14565 SM00924 MgtE intracellular N domain XM56_RS14570 SM00052 Putative diguanylate phosphodiesterase XM56_RS14570 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) XM56_RS14570 SM00091 PAS domain XM56_RS14570 SM00267 diguanylate cyclase XM56_RS14600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS14600 SM00387 Histidine kinase-like ATPases XM56_RS14600 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS14605 SM00448 cheY-homologous receiver domain XM56_RS14605 SM00862 Transcriptional regulatory protein, C terminal XM56_RS14620 SM00046 Diacylglycerol kinase catalytic domain (presumed) XM56_RS14650 SM00420 helix_turn_helix, Deoxyribose operon repressor XM56_RS14650 SM01134 XM56_RS14650 XM56_RS14655 SM00116 Domain in cystathionine beta-synthase and other proteins. XM56_RS14710 SM00116 Domain in cystathionine beta-synthase and other proteins. XM56_RS14710 SM01240 XM56_RS14710 XM56_RS14735 SM00382 ATPases associated with a variety of cellular activities XM56_RS14745 SM00564 beta-propeller repeat XM56_RS14765 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS14770 SM00028 Tetratricopeptide repeats XM56_RS14780 SM00562 XM56_RS14780 XM56_RS14785 SM00247 Beta/gamma crystallins XM56_RS14795 SM01359 XM56_RS14795 XM56_RS14795 SM01360 XM56_RS14795 XM56_RS14800 SM00869 Autotransporter beta-domain XM56_RS14830 SM00271 DnaJ molecular chaperone homology domain XM56_RS14925 SM00938 Nitrogen regulatory protein P-II XM56_RS14935 SM00382 ATPases associated with a variety of cellular activities XM56_RS14935 SM00448 cheY-homologous receiver domain XM56_RS14945 SM00387 Histidine kinase-like ATPases XM56_RS14945 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS14955 SM01211 XM56_RS14955 XM56_RS14960 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS15020 SM00358 Double-stranded RNA binding motif XM56_RS15020 SM00535 Ribonuclease III family XM56_RS15070 SM00487 DEAD-like helicases superfamily XM56_RS15070 SM00490 helicase superfamily c-terminal domain XM56_RS15085 SM00248 ankyrin repeats XM56_RS15105 SM00986 Uracil DNA glycosylase superfamily XM56_RS15105 SM00987 UreE urease accessory protein, C-terminal domain XM56_RS15190 SM00382 ATPases associated with a variety of cellular activities XM56_RS15210 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS15295 SM00988 UreE urease accessory protein, N-terminal domain XM56_RS15315 SM00382 ATPases associated with a variety of cellular activities XM56_RS15320 SM00382 ATPases associated with a variety of cellular activities XM56_RS15350 SM00450 Rhodanese Homology Domain XM56_RS15365 SM00357 Cold shock protein domain XM56_RS15390 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS15415 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS15445 SM00382 ATPases associated with a variety of cellular activities XM56_RS15465 SM00479 XM56_RS15465 XM56_RS15480 SM00849 Metallo-beta-lactamase superfamily XM56_RS15485 SM00257 Lysin motif XM56_RS15515 SM00825 Beta-ketoacyl synthase XM56_RS15555 SM00382 ATPases associated with a variety of cellular activities XM56_RS15555 SM00930 XM56_RS15555 XM56_RS15595 SM01322 XM56_RS15595 XM56_RS15615 SM00977 TilS substrate C-terminal domain XM56_RS15635 SM00481 DNA polymerase alpha chain like domain XM56_RS15665 SM00935 Outer membrane protein (OmpH-like) XM56_RS15675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XM56_RS15720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XM56_RS15765 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XM56_RS15765 SM00475 5'-3' exonuclease XM56_RS15810 SM00925 MltA specific insert domain XM56_RS15820 SM00646 XM56_RS15820 XM56_RS15885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. XM56_RS15900 SM00927 DNA mismatch repair enzyme MutH XM56_RS15920 SM00563 Phosphate acyltransferases XM56_RS15935 SM00354 helix_turn _helix lactose operon repressor XM56_RS15960 SM00849 Metallo-beta-lactamase superfamily XM56_RS15980 SM00862 Transcriptional regulatory protein, C terminal XM56_RS16030 SM00382 ATPases associated with a variety of cellular activities XM56_RS16050 SM00947 Carbonic anhydrase XM56_RS16060 SM00822 XM56_RS16060 XM56_RS16070 SM00271 DnaJ molecular chaperone homology domain XM56_RS16080 SM00354 helix_turn _helix lactose operon repressor XM56_RS16100 SM00344 helix_turn_helix ASNC type XM56_RS16110 SM00091 PAS domain XM56_RS16110 SM00267 diguanylate cyclase XM56_RS16135 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS16145 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS16155 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS16170 SM00857 Resolvase, N terminal domain XM56_RS16190 SM00382 ATPases associated with a variety of cellular activities XM56_RS16210 SM00937 XM56_RS16210 XM56_RS16240 SM00387 Histidine kinase-like ATPases XM56_RS16240 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS16245 SM00448 cheY-homologous receiver domain XM56_RS16245 SM00862 Transcriptional regulatory protein, C terminal XM56_RS16280 SM00822 XM56_RS16280 XM56_RS16315 SM01011 Aminopeptidase P, N-terminal domain XM56_RS16335 SM01192 XM56_RS16335 XM56_RS16335 SM01193 XM56_RS16335 XM56_RS16350 SM00954 Region found in RelA / SpoT proteins XM56_RS16360 SM00073 Histidine Phosphotransfer domain XM56_RS16360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS16360 SM00387 Histidine kinase-like ATPases XM56_RS16360 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS16360 SM00448 cheY-homologous receiver domain XM56_RS16365 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. XM56_RS16370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XM56_RS16420 SM00382 ATPases associated with a variety of cellular activities XM56_RS16430 SM00487 DEAD-like helicases superfamily XM56_RS16430 SM00490 helicase superfamily c-terminal domain XM56_RS16430 SM00847 Helicase associated domain (HA2) Add an annotation XM56_RS16490 SM00382 ATPases associated with a variety of cellular activities XM56_RS16495 SM00947 Carbonic anhydrase XM56_RS16550 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS16575 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS16575 SM00895 XM56_RS16575 XM56_RS16590 SM00644 XM56_RS16590 XM56_RS16615 SM01240 XM56_RS16615 XM56_RS16640 SM00957 SecA DEAD-like domain XM56_RS16640 SM00958 SecA preprotein cross-linking domain XM56_RS16660 SM00864 Tubulin/FtsZ family, GTPase domain XM56_RS16660 SM00865 Tubulin/FtsZ family, C-terminal domain XM56_RS16665 SM00842 Cell division protein FtsA XM56_RS16745 SM00354 helix_turn _helix lactose operon repressor XM56_RS16770 SM00917 LeuA allosteric (dimerisation) domain XM56_RS16775 SM01329 XM56_RS16775 XM56_RS16850 SM00382 ATPases associated with a variety of cellular activities XM56_RS16860 SM00486 DNA polymerase type-B family XM56_RS16865 SM00487 DEAD-like helicases superfamily XM56_RS16865 SM00490 helicase superfamily c-terminal domain XM56_RS16870 SM00634 Bacterial Ig-like domain (group 1) XM56_RS16880 SM00271 DnaJ molecular chaperone homology domain XM56_RS16900 SM00650 Ribosomal RNA adenine dimethylases XM56_RS16935 SM00851 MGS-like domain XM56_RS16935 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain XM56_RS16940 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain XM56_RS16970 SM00904 Riboflavin kinase XM56_RS16995 SM00271 DnaJ molecular chaperone homology domain XM56_RS17010 SM00247 Beta/gamma crystallins XM56_RS17020 SM00852 Probable molybdopterin binding domain XM56_RS17060 SM00448 cheY-homologous receiver domain XM56_RS17060 SM00862 Transcriptional regulatory protein, C terminal XM56_RS17070 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS17070 SM00871 Bacterial transcription activator, effector binding domain XM56_RS17075 SM00855 Phosphoglycerate mutase family XM56_RS17095 SM00831 Cation transporter/ATPase, N-terminus XM56_RS17105 SM00267 diguanylate cyclase XM56_RS17115 SM00382 ATPases associated with a variety of cellular activities XM56_RS17130 SM00829 Enoylreductase XM56_RS17135 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS17140 SM00382 ATPases associated with a variety of cellular activities XM56_RS17165 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain XM56_RS17170 SM01133 XM56_RS17170 XM56_RS17190 SM00749 bacterial OsmY and nodulation domain XM56_RS17235 SM00267 diguanylate cyclase XM56_RS17265 SM00640 Glycosyl hydrolases family 32 XM56_RS17270 SM00354 helix_turn _helix lactose operon repressor XM56_RS17275 SM00091 PAS domain XM56_RS17320 SM01120 XM56_RS17320 XM56_RS17375 SM00382 ATPases associated with a variety of cellular activities XM56_RS17395 SM01133 XM56_RS17395 XM56_RS17445 SM00421 helix_turn_helix, Lux Regulon XM56_RS17465 SM00382 ATPases associated with a variety of cellular activities XM56_RS17485 SM00530 Helix-turn-helix XRE-family like proteins XM56_RS17575 SM00382 ATPases associated with a variety of cellular activities XM56_RS17580 SM00382 ATPases associated with a variety of cellular activities XM56_RS17610 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS17610 SM00866 XM56_RS17610 XM56_RS17635 SM00382 ATPases associated with a variety of cellular activities XM56_RS17640 SM00382 ATPases associated with a variety of cellular activities XM56_RS17650 SM00072 Guanylate kinase homologues. XM56_RS17660 SM00859 Semialdehyde dehydrogenase, NAD binding domain XM56_RS17685 SM00382 ATPases associated with a variety of cellular activities XM56_RS17775 SM00487 DEAD-like helicases superfamily XM56_RS17775 SM00490 helicase superfamily c-terminal domain XM56_RS17780 SM00028 Tetratricopeptide repeats XM56_RS17785 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS17785 SM00322 K homology RNA-binding domain XM56_RS17790 SM01387 XM56_RS17790 XM56_RS17805 SM00173 Ras subfamily of RAS small GTPases XM56_RS17810 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS17810 SM00322 K homology RNA-binding domain XM56_RS17845 SM00382 ATPases associated with a variety of cellular activities XM56_RS17855 SM01103 XM56_RS17855 XM56_RS17870 SM00448 cheY-homologous receiver domain XM56_RS17870 SM00862 Transcriptional regulatory protein, C terminal XM56_RS17875 SM00387 Histidine kinase-like ATPases XM56_RS17875 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS17940 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS17940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS17970 SM01091 Transporter associated domain XM56_RS18055 SM00967 RNA 2'-O ribose methyltransferase substrate binding XM56_RS18060 SM00316 Ribosomal protein S1-like RNA-binding domain XM56_RS18060 SM00357 Cold shock protein domain XM56_RS18060 SM00955 XM56_RS18060 XM56_RS18070 SM00788 Adenylosuccinate synthetase XM56_RS18080 SM00244 prohibitin homologues XM56_RS18085 SM00244 prohibitin homologues XM56_RS18105 SM00853 MutL C terminal dimerisation domain XM56_RS18105 SM01340 XM56_RS18105 XM56_RS18110 SM00257 Lysin motif XM56_RS18110 SM00646 XM56_RS18110 XM56_RS18135 SM00479 XM56_RS18135 XM56_RS18195 SM00841 Elongation factor P, C-terminal XM56_RS18195 SM01185 XM56_RS18195 XM56_RS18220 SM00883 Chaperonin 10 Kd subunit XM56_RS18285 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS18325 SM00382 ATPases associated with a variety of cellular activities XM56_RS18330 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS18360 SM00382 ATPases associated with a variety of cellular activities XM56_RS18365 SM00965 Secretin and TonB N terminus short domain XM56_RS18430 SM00382 ATPases associated with a variety of cellular activities XM56_RS18480 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS18545 SM00387 Histidine kinase-like ATPases XM56_RS18545 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS18545 SM00448 cheY-homologous receiver domain XM56_RS18550 SM00421 helix_turn_helix, Lux Regulon XM56_RS18550 SM00448 cheY-homologous receiver domain XM56_RS18615 SM00798 AICARFT/IMPCHase bienzyme XM56_RS18615 SM00851 MGS-like domain XM56_RS18620 SM01209 XM56_RS18620 XM56_RS18620 SM01210 XM56_RS18620 XM56_RS18630 SM00411 bacterial (prokaryotic) histone like domain XM56_RS18685 SM00876 Biotin and Thiamin Synthesis associated domain XM56_RS18695 SM00663 RNA polymerase I subunit A N-terminus XM56_RS18720 SM00649 Ribosomal protein L11/L12 XM56_RS18725 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XM56_RS18725 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. XM56_RS18850 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. XM56_RS18855 SM01004 Delta-aminolevulinic acid dehydratase XM56_RS18955 SM00382 ATPases associated with a variety of cellular activities XM56_RS19005 SM00382 ATPases associated with a variety of cellular activities XM56_RS19010 SM00382 ATPases associated with a variety of cellular activities XM56_RS19055 SM00382 ATPases associated with a variety of cellular activities XM56_RS19060 SM00382 ATPases associated with a variety of cellular activities XM56_RS19060 SM00962 SRP54-type protein, GTPase domain XM56_RS19060 SM00963 SRP54-type protein, helical bundle domain XM56_RS19155 SM00341 Helicase and RNase D C-terminal XM56_RS19155 SM00487 DEAD-like helicases superfamily XM56_RS19155 SM00490 helicase superfamily c-terminal domain XM56_RS19155 SM00956 XM56_RS19155 XM56_RS19225 SM01219 XM56_RS19225 XM56_RS19330 SM00984 UDP binding domain XM56_RS19355 SM00357 Cold shock protein domain XM56_RS19355 SM00382 ATPases associated with a variety of cellular activities XM56_RS19355 SM00959 Rho termination factor, N-terminal domain XM56_RS19365 SM00487 DEAD-like helicases superfamily XM56_RS19365 SM00490 helicase superfamily c-terminal domain XM56_RS19375 SM00060 Fibronectin type 3 domain XM56_RS19485 SM00382 ATPases associated with a variety of cellular activities XM56_RS19510 SM00382 ATPases associated with a variety of cellular activities XM56_RS19610 SM00382 ATPases associated with a variety of cellular activities XM56_RS19645 SM00859 Semialdehyde dehydrogenase, NAD binding domain XM56_RS19685 SM00487 DEAD-like helicases superfamily XM56_RS19685 SM00490 helicase superfamily c-terminal domain XM56_RS19690 SM00354 helix_turn _helix lactose operon repressor XM56_RS19705 SM00382 ATPases associated with a variety of cellular activities XM56_RS19705 SM01086 C-terminal, D2-small domain, of ClpB protein XM56_RS19800 SM00448 cheY-homologous receiver domain XM56_RS19800 SM00862 Transcriptional regulatory protein, C terminal XM56_RS19805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS19805 SM00387 Histidine kinase-like ATPases XM56_RS19805 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS19810 SM00342 helix_turn_helix, arabinose operon control protein XM56_RS19820 SM00971 Serine acetyltransferase, N-terminal XM56_RS19840 SM00450 Rhodanese Homology Domain XM56_RS19875 SM00829 Enoylreductase XM56_RS19915 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain XM56_RS19915 SM01232 XM56_RS19915 XM56_RS19965 SM00849 Metallo-beta-lactamase superfamily XM56_RS19975 SM00052 Putative diguanylate phosphodiesterase XM56_RS19975 SM00091 PAS domain XM56_RS19975 SM00267 diguanylate cyclase XM56_RS20000 SM00532 Ligase N family XM56_RS20005 SM00072 Guanylate kinase homologues. XM56_RS20010 SM01409 XM56_RS20010 XM56_RS20015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. XM56_RS20015 SM00954 Region found in RelA / SpoT proteins XM56_RS20025 SM00487 DEAD-like helicases superfamily XM56_RS20025 SM00490 helicase superfamily c-terminal domain XM56_RS20050 SM00421 helix_turn_helix, Lux Regulon XM56_RS20055 SM00421 helix_turn_helix, Lux Regulon XM56_RS20090 SM01230 XM56_RS20090 XM56_RS20100 SM00091 PAS domain XM56_RS20100 SM00387 Histidine kinase-like ATPases XM56_RS20100 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS20105 SM00382 ATPases associated with a variety of cellular activities XM56_RS20105 SM00448 cheY-homologous receiver domain XM56_RS20110 SM00729 Elongator protein 3, MiaB family, Radical SAM XM56_RS20125 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs XM56_RS20125 SM00474 3'-5' exonuclease XM56_RS20125 SM00475 5'-3' exonuclease XM56_RS20125 SM00482 DNA polymerase A domain XM56_RS20190 SM00345 helix_turn_helix gluconate operon transcriptional repressor XM56_RS20190 SM00895 XM56_RS20190 XM56_RS20200 SM00354 helix_turn _helix lactose operon repressor XM56_RS20220 SM00382 ATPases associated with a variety of cellular activities XM56_RS20235 SM00382 ATPases associated with a variety of cellular activities XM56_RS20240 SM00327 von Willebrand factor (vWF) type A domain XM56_RS20255 SM00344 helix_turn_helix ASNC type XM56_RS20265 SM01228 XM56_RS20265 XM56_RS20310 SM00382 ATPases associated with a variety of cellular activities XM56_RS20350 SM00382 ATPases associated with a variety of cellular activities XM56_RS20365 SM00062 Bacterial periplasmic substrate-binding proteins XM56_RS20395 SM00421 helix_turn_helix, Lux Regulon XM56_RS20395 SM00448 cheY-homologous receiver domain XM56_RS20400 SM00387 Histidine kinase-like ATPases XM56_RS20400 SM00388 His Kinase A (phosphoacceptor) domain XM56_RS20410 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). XM56_RS20410 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain XM56_RS20420 SM00382 ATPases associated with a variety of cellular activities XM56_RS20420 SM00930 XM56_RS20420 XM56_RS20445 SM01234 XM56_RS20445 XM56_RS20715 SM00345 helix_turn_helix gluconate operon transcriptional repressor