CH47_RS00480 SM00052 Putative diguanylate phosphodiesterase CH47_RS00480 SM00091 PAS domain CH47_RS00480 SM00267 diguanylate cyclase CH47_RS00520 SM00354 helix_turn _helix lactose operon repressor CH47_RS00555 SM00382 ATPases associated with a variety of cellular activities CH47_RS00570 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS00570 SM00387 Histidine kinase-like ATPases CH47_RS00570 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS00570 SM00448 cheY-homologous receiver domain CH47_RS00575 SM00421 helix_turn_helix, Lux Regulon CH47_RS00575 SM00448 cheY-homologous receiver domain CH47_RS00640 SM00382 ATPases associated with a variety of cellular activities CH47_RS00675 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS00675 SM00387 Histidine kinase-like ATPases CH47_RS00675 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS00675 SM00448 cheY-homologous receiver domain CH47_RS00680 SM00421 helix_turn_helix, Lux Regulon CH47_RS00680 SM00448 cheY-homologous receiver domain CH47_RS00735 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS00760 SM00382 ATPases associated with a variety of cellular activities CH47_RS00950 SM00478 endonuclease III CH47_RS00950 SM00525 CH47_RS00950 CH47_RS00975 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS00985 SM01152 CH47_RS00985 CH47_RS01020 SM00732 Likely ribonuclease with RNase H fold. CH47_RS01045 SM00731 SprT homologues. CH47_RS01050 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH47_RS01085 SM00861 Transketolase, pyrimidine binding domain CH47_RS01115 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH47_RS01180 SM01011 Aminopeptidase P, N-terminal domain CH47_RS01240 SM00448 cheY-homologous receiver domain CH47_RS01240 SM00862 Transcriptional regulatory protein, C terminal CH47_RS01245 SM00387 Histidine kinase-like ATPases CH47_RS01245 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS01275 SM00937 CH47_RS01275 CH47_RS01305 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH47_RS01325 SM00091 PAS domain CH47_RS01325 SM00267 diguanylate cyclase CH47_RS01330 SM00344 helix_turn_helix ASNC type CH47_RS01350 SM00354 helix_turn _helix lactose operon repressor CH47_RS01355 SM00271 DnaJ molecular chaperone homology domain CH47_RS01365 SM00822 CH47_RS01365 CH47_RS01375 SM00947 Carbonic anhydrase CH47_RS01395 SM00382 ATPases associated with a variety of cellular activities CH47_RS01440 SM00862 Transcriptional regulatory protein, C terminal CH47_RS01450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS01450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS01450 SM00319 Homologues of the ligand binding domain of Tar CH47_RS01460 SM00849 Metallo-beta-lactamase superfamily CH47_RS01485 SM00354 helix_turn _helix lactose operon repressor CH47_RS01495 SM00563 Phosphate acyltransferases CH47_RS01515 SM00927 DNA mismatch repair enzyme MutH CH47_RS01530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH47_RS01590 SM00646 CH47_RS01590 CH47_RS01615 SM00925 MltA specific insert domain CH47_RS01655 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH47_RS01655 SM00475 5'-3' exonuclease CH47_RS01700 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH47_RS01745 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH47_RS01755 SM00935 Outer membrane protein (OmpH-like) CH47_RS01785 SM00481 DNA polymerase alpha chain like domain CH47_RS01805 SM00977 TilS substrate C-terminal domain CH47_RS01825 SM01322 CH47_RS01825 CH47_RS01865 SM00382 ATPases associated with a variety of cellular activities CH47_RS01865 SM00930 CH47_RS01865 CH47_RS01920 SM00563 Phosphate acyltransferases CH47_RS01975 SM00825 Beta-ketoacyl synthase CH47_RS01985 SM00822 CH47_RS01985 CH47_RS01990 SM00825 Beta-ketoacyl synthase CH47_RS02015 SM00257 Lysin motif CH47_RS02020 SM00849 Metallo-beta-lactamase superfamily CH47_RS02035 SM00479 CH47_RS02035 CH47_RS02055 SM00382 ATPases associated with a variety of cellular activities CH47_RS02085 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS02105 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS02135 SM00357 Cold shock protein domain CH47_RS02140 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS02145 SM00450 Rhodanese Homology Domain CH47_RS02170 SM00382 ATPases associated with a variety of cellular activities CH47_RS02175 SM00382 ATPases associated with a variety of cellular activities CH47_RS02200 SM00988 UreE urease accessory protein, N-terminal domain CH47_RS02285 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS02330 SM00778 Zinc-binding domain of primase-helicase CH47_RS02330 SM00885 D5 N terminal like CH47_RS02445 SM00382 ATPases associated with a variety of cellular activities CH47_RS02490 SM01321 CH47_RS02490 CH47_RS02495 SM00986 Uracil DNA glycosylase superfamily CH47_RS02495 SM00987 UreE urease accessory protein, C-terminal domain CH47_RS02510 SM00248 ankyrin repeats CH47_RS02515 SM00487 DEAD-like helicases superfamily CH47_RS02515 SM00490 helicase superfamily c-terminal domain CH47_RS02565 SM00358 Double-stranded RNA binding motif CH47_RS02565 SM00535 Ribonuclease III family CH47_RS02605 SM00421 helix_turn_helix, Lux Regulon CH47_RS02635 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS02640 SM01211 CH47_RS02640 CH47_RS02655 SM00387 Histidine kinase-like ATPases CH47_RS02655 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS02665 SM00382 ATPases associated with a variety of cellular activities CH47_RS02665 SM00448 cheY-homologous receiver domain CH47_RS02675 SM00938 Nitrogen regulatory protein P-II CH47_RS02780 SM00271 DnaJ molecular chaperone homology domain CH47_RS02810 SM01359 CH47_RS02810 CH47_RS02810 SM01360 CH47_RS02810 CH47_RS02820 SM00247 Beta/gamma crystallins CH47_RS02825 SM00562 CH47_RS02825 CH47_RS02835 SM00028 Tetratricopeptide repeats CH47_RS02840 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS02860 SM00564 beta-propeller repeat CH47_RS02885 SM00116 Domain in cystathionine beta-synthase and other proteins. CH47_RS02885 SM01240 CH47_RS02885 CH47_RS02935 SM00116 Domain in cystathionine beta-synthase and other proteins. CH47_RS02940 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS02940 SM01134 CH47_RS02940 CH47_RS02970 SM00046 Diacylglycerol kinase catalytic domain (presumed) CH47_RS02985 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS02995 SM00448 cheY-homologous receiver domain CH47_RS02995 SM00862 Transcriptional regulatory protein, C terminal CH47_RS03000 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS03000 SM00387 Histidine kinase-like ATPases CH47_RS03000 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS03055 SM00052 Putative diguanylate phosphodiesterase CH47_RS03055 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS03055 SM00091 PAS domain CH47_RS03055 SM00267 diguanylate cyclase CH47_RS03060 SM00924 MgtE intracellular N domain CH47_RS03150 SM01130 CH47_RS03150 CH47_RS03225 SM00421 helix_turn_helix, Lux Regulon CH47_RS03225 SM00448 cheY-homologous receiver domain CH47_RS03240 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH47_RS03270 SM00919 Malic enzyme, NAD binding domain CH47_RS03270 SM01274 CH47_RS03270 CH47_RS03275 SM00421 helix_turn_helix, Lux Regulon CH47_RS03315 SM01130 CH47_RS03315 CH47_RS03360 SM00382 ATPases associated with a variety of cellular activities CH47_RS03370 SM00382 ATPases associated with a variety of cellular activities CH47_RS03380 SM00448 cheY-homologous receiver domain CH47_RS03380 SM00862 Transcriptional regulatory protein, C terminal CH47_RS03385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS03385 SM00387 Histidine kinase-like ATPases CH47_RS03385 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS03415 SM00771 ZipA, C-terminal domain (FtsZ-binding) CH47_RS03420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH47_RS03420 SM00292 breast cancer carboxy-terminal domain CH47_RS03420 SM00532 Ligase N family CH47_RS03525 SM00448 cheY-homologous receiver domain CH47_RS03525 SM00850 LytTr DNA-binding domain CH47_RS03530 SM00387 Histidine kinase-like ATPases CH47_RS03590 SM00382 ATPases associated with a variety of cellular activities CH47_RS03640 SM00382 ATPases associated with a variety of cellular activities CH47_RS03670 SM00867 YceI-like domain CH47_RS03675 SM00354 helix_turn _helix lactose operon repressor CH47_RS03745 SM00778 Zinc-binding domain of primase-helicase CH47_RS03780 SM00382 ATPases associated with a variety of cellular activities CH47_RS03865 SM00463 Small MutS-related domain CH47_RS03905 SM00825 Beta-ketoacyl synthase CH47_RS03910 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS03910 SM00091 PAS domain CH47_RS03910 SM00267 diguanylate cyclase CH47_RS03945 SM00354 helix_turn _helix lactose operon repressor CH47_RS03985 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS04000 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS04010 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH47_RS04055 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS04070 SM00382 ATPases associated with a variety of cellular activities CH47_RS04085 SM00052 Putative diguanylate phosphodiesterase CH47_RS04100 SM01321 CH47_RS04100 CH47_RS04125 SM00354 helix_turn _helix lactose operon repressor CH47_RS04130 SM01321 CH47_RS04130 CH47_RS04170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH47_RS04210 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CH47_RS04215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH47_RS04215 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CH47_RS04295 SM00354 helix_turn _helix lactose operon repressor CH47_RS04365 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH47_RS04375 SM01060 CH47_RS04375 CH47_RS04390 SM00852 Probable molybdopterin binding domain CH47_RS04435 SM00434 DNA Topoisomerase IV CH47_RS04440 SM00387 Histidine kinase-like ATPases CH47_RS04440 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS04440 SM00448 cheY-homologous receiver domain CH47_RS04445 SM00421 helix_turn_helix, Lux Regulon CH47_RS04445 SM00448 cheY-homologous receiver domain CH47_RS04450 SM00387 Histidine kinase-like ATPases CH47_RS04450 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS04500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS04500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS04515 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS04580 SM00487 DEAD-like helicases superfamily CH47_RS04580 SM00490 helicase superfamily c-terminal domain CH47_RS04585 SM00363 S4 RNA-binding domain CH47_RS04600 SM00382 ATPases associated with a variety of cellular activities CH47_RS04635 SM00014 Acid phosphatase homologues CH47_RS04640 SM00833 Cobalamin synthesis protein cobW C-terminal domain CH47_RS04650 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS04650 SM00895 CH47_RS04650 CH47_RS04665 SM00841 Elongation factor P, C-terminal CH47_RS04665 SM01185 CH47_RS04665 CH47_RS04710 SM00862 Transcriptional regulatory protein, C terminal CH47_RS04735 SM00518 AP endonuclease family 2 CH47_RS04760 SM00382 ATPases associated with a variety of cellular activities CH47_RS04790 SM00382 ATPases associated with a variety of cellular activities CH47_RS04790 SM00930 CH47_RS04790 CH47_RS04805 SM00116 Domain in cystathionine beta-synthase and other proteins. CH47_RS04810 SM00936 Penicillin-binding protein 5, C-terminal domain CH47_RS04825 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS04825 SM01134 CH47_RS04825 CH47_RS04830 SM01133 CH47_RS04830 CH47_RS04835 SM00014 Acid phosphatase homologues CH47_RS05070 SM00382 ATPases associated with a variety of cellular activities CH47_RS05095 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS05095 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH47_RS05110 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS05110 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH47_RS05115 SM00382 ATPases associated with a variety of cellular activities CH47_RS05180 SM00382 ATPases associated with a variety of cellular activities CH47_RS05185 SM00357 Cold shock protein domain CH47_RS05195 SM00382 ATPases associated with a variety of cellular activities CH47_RS05195 SM01086 C-terminal, D2-small domain, of ClpB protein CH47_RS05200 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS05215 SM00382 ATPases associated with a variety of cellular activities CH47_RS05220 SM00382 ATPases associated with a variety of cellular activities CH47_RS05230 SM00344 helix_turn_helix ASNC type CH47_RS05235 SM00843 CH47_RS05235 CH47_RS05245 SM00382 ATPases associated with a variety of cellular activities CH47_RS05280 SM00870 CH47_RS05280 CH47_RS05305 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS05310 SM00411 bacterial (prokaryotic) histone like domain CH47_RS05315 SM00849 Metallo-beta-lactamase superfamily CH47_RS05320 SM00382 ATPases associated with a variety of cellular activities CH47_RS05330 SM01150 CH47_RS05330 CH47_RS05335 SM00357 Cold shock protein domain CH47_RS05340 SM00357 Cold shock protein domain CH47_RS05395 SM00849 Metallo-beta-lactamase superfamily CH47_RS05400 SM00052 Putative diguanylate phosphodiesterase CH47_RS05445 SM00981 CH47_RS05445 CH47_RS05450 SM00382 ATPases associated with a variety of cellular activities CH47_RS05470 SM00825 Beta-ketoacyl synthase CH47_RS05525 SM00851 MGS-like domain CH47_RS05535 SM00881 CoA binding domain CH47_RS05540 SM00992 Hemimethylated DNA-binding protein YccV like CH47_RS05545 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH47_RS05580 SM00421 helix_turn_helix, Lux Regulon CH47_RS05595 SM01091 Transporter associated domain CH47_RS05650 SM00421 helix_turn_helix, Lux Regulon CH47_RS05650 SM00448 cheY-homologous receiver domain CH47_RS05655 SM00387 Histidine kinase-like ATPases CH47_RS05670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH47_RS05680 SM00450 Rhodanese Homology Domain CH47_RS05690 SM00421 helix_turn_helix, Lux Regulon CH47_RS05730 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS05735 SM00363 S4 RNA-binding domain CH47_RS05765 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH47_RS05770 SM00822 CH47_RS05770 CH47_RS05780 SM00825 Beta-ketoacyl synthase CH47_RS05890 SM00487 DEAD-like helicases superfamily CH47_RS05890 SM00490 helicase superfamily c-terminal domain CH47_RS05890 SM00982 CH47_RS05890 CH47_RS05890 SM01058 CarD-like/TRCF domain CH47_RS05900 SM00382 ATPases associated with a variety of cellular activities CH47_RS05925 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CH47_RS05930 SM00387 Histidine kinase-like ATPases CH47_RS05930 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS05935 SM00448 cheY-homologous receiver domain CH47_RS05935 SM00862 Transcriptional regulatory protein, C terminal CH47_RS05970 SM01329 CH47_RS05970 CH47_RS05990 SM00354 helix_turn _helix lactose operon repressor CH47_RS06005 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS06005 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS06045 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS06070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS06070 SM00091 PAS domain CH47_RS06080 SM00267 diguanylate cyclase CH47_RS06085 SM00090 RIO-like kinase CH47_RS06090 SM00382 ATPases associated with a variety of cellular activities CH47_RS06115 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS06165 SM00357 Cold shock protein domain CH47_RS06190 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS06190 SM00091 PAS domain CH47_RS06190 SM00267 diguanylate cyclase CH47_RS06225 SM01091 Transporter associated domain CH47_RS06260 SM00487 DEAD-like helicases superfamily CH47_RS06260 SM00490 helicase superfamily c-terminal domain CH47_RS06270 SM01022 CH47_RS06270 CH47_RS06285 SM00479 CH47_RS06285 CH47_RS06640 SM00465 GIY-YIG type nucleases (URI domain) CH47_RS06645 SM00421 helix_turn_helix, Lux Regulon CH47_RS06645 SM00448 cheY-homologous receiver domain CH47_RS06665 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS06705 SM00363 S4 RNA-binding domain CH47_RS06750 SM01022 CH47_RS06750 CH47_RS06760 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS06760 SM00091 PAS domain CH47_RS06760 SM00267 diguanylate cyclase CH47_RS06765 SM00972 Spore Coat Protein U domain CH47_RS06780 SM00972 Spore Coat Protein U domain CH47_RS06785 SM00972 Spore Coat Protein U domain CH47_RS06790 SM00972 Spore Coat Protein U domain CH47_RS06815 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH47_RS06820 SM00945 ProQ/FINO family CH47_RS06825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH47_RS06825 SM00245 tail specific protease CH47_RS06870 SM00346 helix_turn_helix isocitrate lyase regulation CH47_RS06875 SM00644 CH47_RS06875 CH47_RS06900 SM00382 ATPases associated with a variety of cellular activities CH47_RS06990 SM00382 ATPases associated with a variety of cellular activities CH47_RS07040 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH47_RS07065 SM00873 B3/4 domain CH47_RS07065 SM00874 tRNA synthetase B5 domain CH47_RS07065 SM00896 Ferredoxin-fold anticodon binding domain CH47_RS07070 SM00411 bacterial (prokaryotic) histone like domain CH47_RS07090 SM00670 Large family of predicted nucleotide-binding domains CH47_RS07170 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS07175 SM00612 CH47_RS07175 CH47_RS07185 SM00903 Flavin reductase like domain CH47_RS07280 SM00642 Alpha-amylase domain CH47_RS07300 SM00014 Acid phosphatase homologues CH47_RS07310 SM00028 Tetratricopeptide repeats CH47_RS07335 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CH47_RS07350 SM01007 Class II Aldolase and Adducin N-terminal domain CH47_RS07360 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS07360 SM01134 CH47_RS07360 CH47_RS07380 SM00357 Cold shock protein domain CH47_RS07380 SM00955 CH47_RS07380 CH47_RS07405 SM00478 endonuclease III CH47_RS07405 SM00525 CH47_RS07405 CH47_RS07415 SM00900 CH47_RS07415 CH47_RS07425 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS07455 SM00382 ATPases associated with a variety of cellular activities CH47_RS07465 SM00382 ATPases associated with a variety of cellular activities CH47_RS07485 SM00382 ATPases associated with a variety of cellular activities CH47_RS07495 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS07525 SM00354 helix_turn _helix lactose operon repressor CH47_RS07550 SM00421 helix_turn_helix, Lux Regulon CH47_RS07640 SM00421 helix_turn_helix, Lux Regulon CH47_RS07670 SM00344 helix_turn_helix ASNC type CH47_RS07685 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS07705 SM00869 Autotransporter beta-domain CH47_RS07710 SM00421 helix_turn_helix, Lux Regulon CH47_RS07725 SM00354 helix_turn _helix lactose operon repressor CH47_RS07795 SM00098 Alkaline phosphatase homologues CH47_RS07800 SM00822 CH47_RS07800 CH47_RS07805 SM00871 Bacterial transcription activator, effector binding domain CH47_RS07825 SM00100 Cyclic nucleotide-monophosphate binding domain CH47_RS07825 SM00419 helix_turn_helix, cAMP Regulatory protein CH47_RS07840 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CH47_RS07840 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CH47_RS07865 SM00448 cheY-homologous receiver domain CH47_RS07865 SM00862 Transcriptional regulatory protein, C terminal CH47_RS07870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS07870 SM00387 Histidine kinase-like ATPases CH47_RS07870 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS07885 SM00020 Trypsin-like serine protease CH47_RS07890 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS07900 SM00382 ATPases associated with a variety of cellular activities CH47_RS07900 SM00487 DEAD-like helicases superfamily CH47_RS07900 SM00490 helicase superfamily c-terminal domain CH47_RS07900 SM00847 Helicase associated domain (HA2) Add an annotation CH47_RS07955 SM00890 Domain of unknown function CH47_RS07970 SM01061 CAT RNA binding domain CH47_RS08005 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CH47_RS08015 SM00091 PAS domain CH47_RS08015 SM00382 ATPases associated with a variety of cellular activities CH47_RS08025 SM00953 CH47_RS08025 CH47_RS08060 SM00382 ATPases associated with a variety of cellular activities CH47_RS08090 SM00382 ATPases associated with a variety of cellular activities CH47_RS08095 SM00382 ATPases associated with a variety of cellular activities CH47_RS08145 SM00363 S4 RNA-binding domain CH47_RS08170 SM00347 helix_turn_helix multiple antibiotic resistance protein CH47_RS08220 SM00479 CH47_RS08220 CH47_RS08240 SM00354 helix_turn _helix lactose operon repressor CH47_RS08315 SM00382 ATPases associated with a variety of cellular activities CH47_RS08430 SM00382 ATPases associated with a variety of cellular activities CH47_RS08455 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH47_RS08455 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH47_RS08455 SM00493 CH47_RS08455 CH47_RS08480 SM00363 S4 RNA-binding domain CH47_RS08490 SM00481 DNA polymerase alpha chain like domain CH47_RS08525 SM00749 bacterial OsmY and nodulation domain CH47_RS08575 SM00052 Putative diguanylate phosphodiesterase CH47_RS08580 SM00155 Phospholipase D. Active site motifs. CH47_RS08590 SM00382 ATPases associated with a variety of cellular activities CH47_RS08595 SM00382 ATPases associated with a variety of cellular activities CH47_RS08640 SM00528 Domain in histone-like proteins of HNS family CH47_RS08645 SM00984 UDP binding domain CH47_RS08650 SM00448 cheY-homologous receiver domain CH47_RS08705 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CH47_RS08705 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CH47_RS08705 SM00493 CH47_RS08705 CH47_RS08725 SM00870 CH47_RS08725 CH47_RS08745 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CH47_RS08775 SM00763 PrkA AAA domain CH47_RS08805 SM00052 Putative diguanylate phosphodiesterase CH47_RS08805 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH47_RS08805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS08805 SM00091 PAS domain CH47_RS08805 SM00267 diguanylate cyclase CH47_RS08815 SM01005 Alanine racemase, C-terminal domain CH47_RS08830 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS08925 SM00341 Helicase and RNase D C-terminal CH47_RS08925 SM00474 3'-5' exonuclease CH47_RS08945 SM00487 DEAD-like helicases superfamily CH47_RS08945 SM00491 CH47_RS08945 CH47_RS08990 SM00257 Lysin motif CH47_RS09000 SM00382 ATPases associated with a variety of cellular activities CH47_RS09015 SM00382 ATPases associated with a variety of cellular activities CH47_RS09020 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH47_RS09080 SM00836 DALR anticodon binding domain CH47_RS09080 SM01016 Arginyl tRNA synthetase N terminal dom CH47_RS09085 SM00912 haemagglutination activity domain CH47_RS09140 SM00481 DNA polymerase alpha chain like domain CH47_RS09165 SM00267 diguanylate cyclase CH47_RS09195 SM00937 CH47_RS09195 CH47_RS09215 SM01400 CH47_RS09215 CH47_RS09285 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS09285 SM01134 CH47_RS09285 CH47_RS09300 SM00257 Lysin motif CH47_RS09335 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS09335 SM00866 CH47_RS09335 CH47_RS09380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS09395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS09395 SM00387 Histidine kinase-like ATPases CH47_RS09490 SM00382 ATPases associated with a variety of cellular activities CH47_RS09540 SM01007 Class II Aldolase and Adducin N-terminal domain CH47_RS09550 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS09550 SM01134 CH47_RS09550 CH47_RS09555 SM00387 Histidine kinase-like ATPases CH47_RS09560 SM00448 cheY-homologous receiver domain CH47_RS09600 SM00382 ATPases associated with a variety of cellular activities CH47_RS09610 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS09610 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH47_RS09665 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS09670 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH47_RS09675 SM00478 endonuclease III CH47_RS09725 SM00382 ATPases associated with a variety of cellular activities CH47_RS09785 SM00047 Lysozyme subfamily 2 CH47_RS09830 SM00858 CH47_RS09830 CH47_RS09845 SM00634 Bacterial Ig-like domain (group 1) CH47_RS09875 SM00448 cheY-homologous receiver domain CH47_RS09880 SM00448 cheY-homologous receiver domain CH47_RS09885 SM00138 Methyltransferase, chemotaxis proteins CH47_RS09890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS09890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS09890 SM00319 Homologues of the ligand binding domain of Tar CH47_RS09895 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS09895 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS09895 SM00319 Homologues of the ligand binding domain of Tar CH47_RS09900 SM00260 Two component signalling adaptor domain CH47_RS09905 SM00073 Histidine Phosphotransfer domain CH47_RS09905 SM00260 Two component signalling adaptor domain CH47_RS09905 SM00387 Histidine kinase-like ATPases CH47_RS09905 SM01231 CH47_RS09905 CH47_RS09935 SM00829 Enoylreductase CH47_RS09940 SM00831 Cation transporter/ATPase, N-terminus CH47_RS09955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS09955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS09965 SM00357 Cold shock protein domain CH47_RS09970 SM00354 helix_turn _helix lactose operon repressor CH47_RS09975 SM01038 Beta galactosidase small chain CH47_RS09990 SM00829 Enoylreductase CH47_RS10000 SM00344 helix_turn_helix ASNC type CH47_RS10055 SM00382 ATPases associated with a variety of cellular activities CH47_RS10090 SM00382 ATPases associated with a variety of cellular activities CH47_RS10095 SM00382 ATPases associated with a variety of cellular activities CH47_RS10100 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS10105 SM00823 Phosphopantetheine attachment site CH47_RS10110 SM00822 CH47_RS10110 CH47_RS10110 SM00823 Phosphopantetheine attachment site CH47_RS10110 SM00824 Thioesterase CH47_RS10110 SM00825 Beta-ketoacyl synthase CH47_RS10110 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CH47_RS10120 SM00824 Thioesterase CH47_RS10180 SM00490 helicase superfamily c-terminal domain CH47_RS10280 SM00764 Citrate lyase ligase C-terminal domain CH47_RS10285 SM00091 PAS domain CH47_RS10285 SM00387 Histidine kinase-like ATPases CH47_RS10290 SM00448 cheY-homologous receiver domain CH47_RS10295 SM00421 helix_turn_helix, Lux Regulon CH47_RS10295 SM00448 cheY-homologous receiver domain CH47_RS10300 SM00387 Histidine kinase-like ATPases CH47_RS10320 SM00382 ATPases associated with a variety of cellular activities CH47_RS10330 SM00421 helix_turn_helix, Lux Regulon CH47_RS10330 SM00448 cheY-homologous receiver domain CH47_RS10335 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS10335 SM00387 Histidine kinase-like ATPases CH47_RS10335 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS10335 SM00448 cheY-homologous receiver domain CH47_RS10380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS10395 SM00260 Two component signalling adaptor domain CH47_RS10395 SM00448 cheY-homologous receiver domain CH47_RS10405 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS10405 SM01134 CH47_RS10405 CH47_RS10515 SM00382 ATPases associated with a variety of cellular activities CH47_RS10515 SM01086 C-terminal, D2-small domain, of ClpB protein CH47_RS10560 SM00421 helix_turn_helix, Lux Regulon CH47_RS10575 SM00855 Phosphoglycerate mutase family CH47_RS10595 SM00382 ATPases associated with a variety of cellular activities CH47_RS10675 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS10685 SM00877 CH47_RS10685 CH47_RS10690 SM00877 CH47_RS10690 CH47_RS10720 SM00877 CH47_RS10720 CH47_RS10725 SM00877 CH47_RS10725 CH47_RS10765 SM00877 CH47_RS10765 CH47_RS10770 SM00877 CH47_RS10770 CH47_RS10815 SM00382 ATPases associated with a variety of cellular activities CH47_RS10865 SM00382 ATPases associated with a variety of cellular activities CH47_RS10920 SM01350 CH47_RS10920 CH47_RS10950 SM01091 Transporter associated domain CH47_RS11025 SM00919 Malic enzyme, NAD binding domain CH47_RS11025 SM01274 CH47_RS11025 CH47_RS11105 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH47_RS11110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CH47_RS11110 SM00382 ATPases associated with a variety of cellular activities CH47_RS11125 SM00382 ATPases associated with a variety of cellular activities CH47_RS11135 SM00354 helix_turn _helix lactose operon repressor CH47_RS11160 SM00829 Enoylreductase CH47_RS11190 SM00382 ATPases associated with a variety of cellular activities CH47_RS11205 SM00852 Probable molybdopterin binding domain CH47_RS11215 SM01276 CH47_RS11215 CH47_RS11220 SM00382 ATPases associated with a variety of cellular activities CH47_RS11260 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. CH47_RS11290 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS11290 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CH47_RS11300 SM00382 ATPases associated with a variety of cellular activities CH47_RS11305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CH47_RS11305 SM00091 PAS domain CH47_RS11305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS11315 SM00903 Flavin reductase like domain CH47_RS11340 SM00487 DEAD-like helicases superfamily CH47_RS11340 SM00488 CH47_RS11340 CH47_RS11340 SM00491 CH47_RS11340 CH47_RS11385 SM00382 ATPases associated with a variety of cellular activities CH47_RS11410 SM00450 Rhodanese Homology Domain CH47_RS11415 SM00382 ATPases associated with a variety of cellular activities CH47_RS11460 SM00382 ATPases associated with a variety of cellular activities CH47_RS11475 SM00507 HNH nucleases CH47_RS11480 SM01118 CH47_RS11480 CH47_RS11520 SM00487 DEAD-like helicases superfamily CH47_RS11520 SM00490 helicase superfamily c-terminal domain CH47_RS11535 SM00382 ATPases associated with a variety of cellular activities CH47_RS11570 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS11585 SM00487 DEAD-like helicases superfamily CH47_RS11585 SM00490 helicase superfamily c-terminal domain CH47_RS11590 SM00382 ATPases associated with a variety of cellular activities CH47_RS11610 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS11610 SM00876 Biotin and Thiamin Synthesis associated domain CH47_RS11630 SM00382 ATPases associated with a variety of cellular activities CH47_RS11655 SM00382 ATPases associated with a variety of cellular activities CH47_RS11695 SM00477 DNA/RNA non-specific endonuclease CH47_RS11695 SM00892 DNA/RNA non-specific endonuclease CH47_RS11700 SM00855 Phosphoglycerate mutase family CH47_RS11805 SM00881 CoA binding domain CH47_RS11820 SM00861 Transketolase, pyrimidine binding domain CH47_RS11870 SM00797 Allophanate hydrolase subunit 2 CH47_RS11875 SM00796 Allophanate hydrolase subunit 1 CH47_RS11925 SM00387 Histidine kinase-like ATPases CH47_RS11925 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS11930 SM00448 cheY-homologous receiver domain CH47_RS11930 SM00862 Transcriptional regulatory protein, C terminal CH47_RS11965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS11980 SM01081 Putative carbohydrate binding domain CH47_RS12065 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS12080 SM00116 Domain in cystathionine beta-synthase and other proteins. CH47_RS12080 SM01091 Transporter associated domain CH47_RS12095 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS12110 SM00382 ATPases associated with a variety of cellular activities CH47_RS12165 SM00936 Penicillin-binding protein 5, C-terminal domain CH47_RS12180 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS12190 SM00267 diguanylate cyclase CH47_RS12200 SM00357 Cold shock protein domain CH47_RS12210 SM00421 helix_turn_helix, Lux Regulon CH47_RS12235 SM00382 ATPases associated with a variety of cellular activities CH47_RS12250 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. CH47_RS12260 SM00448 cheY-homologous receiver domain CH47_RS12260 SM00862 Transcriptional regulatory protein, C terminal CH47_RS12265 SM00387 Histidine kinase-like ATPases CH47_RS12265 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS12415 SM00840 CH47_RS12415 CH47_RS12430 SM01001 AIR carboxylase CH47_RS12445 SM00382 ATPases associated with a variety of cellular activities CH47_RS12455 SM00822 CH47_RS12455 CH47_RS12465 SM00244 prohibitin homologues CH47_RS12475 SM00422 helix_turn_helix, mercury resistance CH47_RS12620 SM00387 Histidine kinase-like ATPases CH47_RS12625 SM00493 CH47_RS12625 CH47_RS12635 SM00382 ATPases associated with a variety of cellular activities CH47_RS12730 SM00382 ATPases associated with a variety of cellular activities CH47_RS12770 SM00938 Nitrogen regulatory protein P-II CH47_RS12775 SM00382 ATPases associated with a variety of cellular activities CH47_RS12780 SM00382 ATPases associated with a variety of cellular activities CH47_RS12785 SM00344 helix_turn_helix ASNC type CH47_RS12815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CH47_RS12825 SM00411 bacterial (prokaryotic) histone like domain CH47_RS12830 SM00382 ATPases associated with a variety of cellular activities CH47_RS12830 SM00464 Found in ATP-dependent protease La (LON) CH47_RS12835 SM00382 ATPases associated with a variety of cellular activities CH47_RS12835 SM00994 ClpX C4-type zinc finger CH47_RS12835 SM01086 C-terminal, D2-small domain, of ClpB protein CH47_RS12915 SM00981 CH47_RS12915 CH47_RS12930 SM00861 Transketolase, pyrimidine binding domain CH47_RS12975 SM01323 CH47_RS12975 CH47_RS13015 SM00642 Alpha-amylase domain CH47_RS13035 SM00091 PAS domain CH47_RS13035 SM00387 Histidine kinase-like ATPases CH47_RS13035 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS13040 SM00448 cheY-homologous receiver domain CH47_RS13040 SM00862 Transcriptional regulatory protein, C terminal CH47_RS13110 SM01068 Putative carbohydrate binding domain CH47_RS13130 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS13130 SM00866 CH47_RS13130 CH47_RS13140 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CH47_RS13220 SM00900 CH47_RS13220 CH47_RS13260 SM00710 Parallel beta-helix repeats CH47_RS13290 SM01007 Class II Aldolase and Adducin N-terminal domain CH47_RS13320 SM00347 helix_turn_helix multiple antibiotic resistance protein CH47_RS13350 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH47_RS13360 SM01144 CH47_RS13360 CH47_RS13365 SM00881 CoA binding domain CH47_RS13370 SM00155 Phospholipase D. Active site motifs. CH47_RS13420 SM00382 ATPases associated with a variety of cellular activities CH47_RS13420 SM01086 C-terminal, D2-small domain, of ClpB protein CH47_RS13430 SM00363 S4 RNA-binding domain CH47_RS13445 SM00830 Chorismate mutase type II CH47_RS13450 SM00830 Chorismate mutase type II CH47_RS13460 SM00448 cheY-homologous receiver domain CH47_RS13460 SM00850 LytTr DNA-binding domain CH47_RS13495 SM00382 ATPases associated with a variety of cellular activities CH47_RS13495 SM00962 SRP54-type protein, GTPase domain CH47_RS13495 SM00963 SRP54-type protein, helical bundle domain CH47_RS13505 SM01091 Transporter associated domain CH47_RS13555 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CH47_RS13565 SM00382 ATPases associated with a variety of cellular activities CH47_RS13595 SM00861 Transketolase, pyrimidine binding domain CH47_RS13610 SM00382 ATPases associated with a variety of cellular activities CH47_RS13665 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CH47_RS13670 SM00838 Elongation factor G C-terminus CH47_RS13670 SM00889 Elongation factor G, domain IV CH47_RS13675 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS13690 SM00382 ATPases associated with a variety of cellular activities CH47_RS13705 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS13725 SM00822 CH47_RS13725 CH47_RS13740 SM00825 Beta-ketoacyl synthase CH47_RS13750 SM00382 ATPases associated with a variety of cellular activities CH47_RS13760 SM00382 ATPases associated with a variety of cellular activities CH47_RS13830 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CH47_RS13830 SM00534 ATPase domain of DNA mismatch repair MUTS family CH47_RS13840 SM00257 Lysin motif CH47_RS13960 SM01192 CH47_RS13960 CH47_RS13960 SM01193 CH47_RS13960 CH47_RS13975 SM00954 Region found in RelA / SpoT proteins CH47_RS13985 SM00073 Histidine Phosphotransfer domain CH47_RS13985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS13985 SM00387 Histidine kinase-like ATPases CH47_RS13985 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS13985 SM00448 cheY-homologous receiver domain CH47_RS13990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH47_RS13995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH47_RS14050 SM00382 ATPases associated with a variety of cellular activities CH47_RS14060 SM00487 DEAD-like helicases superfamily CH47_RS14060 SM00490 helicase superfamily c-terminal domain CH47_RS14060 SM00847 Helicase associated domain (HA2) Add an annotation CH47_RS14120 SM00382 ATPases associated with a variety of cellular activities CH47_RS14125 SM00947 Carbonic anhydrase CH47_RS14180 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS14200 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS14200 SM00895 CH47_RS14200 CH47_RS14210 SM00634 Bacterial Ig-like domain (group 1) CH47_RS14220 SM00644 CH47_RS14220 CH47_RS14245 SM01240 CH47_RS14245 CH47_RS14270 SM00957 SecA DEAD-like domain CH47_RS14270 SM00958 SecA preprotein cross-linking domain CH47_RS14290 SM00864 Tubulin/FtsZ family, GTPase domain CH47_RS14290 SM00865 Tubulin/FtsZ family, C-terminal domain CH47_RS14295 SM00842 Cell division protein FtsA CH47_RS14375 SM00354 helix_turn _helix lactose operon repressor CH47_RS14400 SM00917 LeuA allosteric (dimerisation) domain CH47_RS14405 SM01329 CH47_RS14405 CH47_RS14485 SM00382 ATPases associated with a variety of cellular activities CH47_RS14495 SM00486 DNA polymerase type-B family CH47_RS14500 SM00487 DEAD-like helicases superfamily CH47_RS14500 SM00490 helicase superfamily c-terminal domain CH47_RS14510 SM00271 DnaJ molecular chaperone homology domain CH47_RS14530 SM00650 Ribosomal RNA adenine dimethylases CH47_RS14565 SM00851 MGS-like domain CH47_RS14565 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CH47_RS14570 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CH47_RS14600 SM00904 Riboflavin kinase CH47_RS14620 SM00271 DnaJ molecular chaperone homology domain CH47_RS14645 SM00852 Probable molybdopterin binding domain CH47_RS14680 SM00448 cheY-homologous receiver domain CH47_RS14680 SM00862 Transcriptional regulatory protein, C terminal CH47_RS14690 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS14690 SM00871 Bacterial transcription activator, effector binding domain CH47_RS14695 SM00855 Phosphoglycerate mutase family CH47_RS14715 SM00831 Cation transporter/ATPase, N-terminus CH47_RS14725 SM00267 diguanylate cyclase CH47_RS14735 SM00382 ATPases associated with a variety of cellular activities CH47_RS14750 SM00829 Enoylreductase CH47_RS14755 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS14760 SM00382 ATPases associated with a variety of cellular activities CH47_RS14790 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CH47_RS14795 SM01133 CH47_RS14795 CH47_RS14815 SM00749 bacterial OsmY and nodulation domain CH47_RS14865 SM00267 diguanylate cyclase CH47_RS14895 SM00640 Glycosyl hydrolases family 32 CH47_RS14900 SM00354 helix_turn _helix lactose operon repressor CH47_RS14905 SM00091 PAS domain CH47_RS14950 SM01120 CH47_RS14950 CH47_RS15010 SM00382 ATPases associated with a variety of cellular activities CH47_RS15030 SM01133 CH47_RS15030 CH47_RS15065 SM00953 CH47_RS15065 CH47_RS15105 SM00421 helix_turn_helix, Lux Regulon CH47_RS15220 SM00382 ATPases associated with a variety of cellular activities CH47_RS15225 SM00382 ATPases associated with a variety of cellular activities CH47_RS15270 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS15270 SM00866 CH47_RS15270 CH47_RS15295 SM00382 ATPases associated with a variety of cellular activities CH47_RS15300 SM00382 ATPases associated with a variety of cellular activities CH47_RS15310 SM00072 Guanylate kinase homologues. CH47_RS15320 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH47_RS15340 SM00382 ATPases associated with a variety of cellular activities CH47_RS15440 SM00487 DEAD-like helicases superfamily CH47_RS15440 SM00490 helicase superfamily c-terminal domain CH47_RS15445 SM00028 Tetratricopeptide repeats CH47_RS15450 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS15450 SM00322 K homology RNA-binding domain CH47_RS15455 SM01387 CH47_RS15455 CH47_RS15475 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS15475 SM00322 K homology RNA-binding domain CH47_RS15510 SM00382 ATPases associated with a variety of cellular activities CH47_RS15520 SM01103 CH47_RS15520 CH47_RS15535 SM00448 cheY-homologous receiver domain CH47_RS15535 SM00862 Transcriptional regulatory protein, C terminal CH47_RS15540 SM00387 Histidine kinase-like ATPases CH47_RS15540 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS15605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS15605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS15635 SM01091 Transporter associated domain CH47_RS15715 SM00967 RNA 2'-O ribose methyltransferase substrate binding CH47_RS15720 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS15720 SM00357 Cold shock protein domain CH47_RS15720 SM00955 CH47_RS15720 CH47_RS15730 SM00788 Adenylosuccinate synthetase CH47_RS15740 SM00244 prohibitin homologues CH47_RS15745 SM00244 prohibitin homologues CH47_RS15765 SM00853 MutL C terminal dimerisation domain CH47_RS15765 SM01340 CH47_RS15765 CH47_RS15770 SM00257 Lysin motif CH47_RS15770 SM00646 CH47_RS15770 CH47_RS15805 SM00479 CH47_RS15805 CH47_RS15865 SM00841 Elongation factor P, C-terminal CH47_RS15865 SM01185 CH47_RS15865 CH47_RS15885 SM00883 Chaperonin 10 Kd subunit CH47_RS15950 SM00822 CH47_RS15950 CH47_RS15980 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS16020 SM00382 ATPases associated with a variety of cellular activities CH47_RS16025 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS16050 SM00382 ATPases associated with a variety of cellular activities CH47_RS16055 SM00965 Secretin and TonB N terminus short domain CH47_RS16085 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS16090 SM00421 helix_turn_helix, Lux Regulon CH47_RS16090 SM00448 cheY-homologous receiver domain CH47_RS16145 SM00798 AICARFT/IMPCHase bienzyme CH47_RS16145 SM00851 MGS-like domain CH47_RS16150 SM01209 CH47_RS16150 CH47_RS16150 SM01210 CH47_RS16150 CH47_RS16160 SM00411 bacterial (prokaryotic) histone like domain CH47_RS16215 SM00876 Biotin and Thiamin Synthesis associated domain CH47_RS16225 SM00663 RNA polymerase I subunit A N-terminus CH47_RS16250 SM00649 Ribosomal protein L11/L12 CH47_RS16255 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH47_RS16255 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH47_RS16310 SM01321 CH47_RS16310 CH47_RS16380 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CH47_RS16385 SM01004 Delta-aminolevulinic acid dehydratase CH47_RS16480 SM00382 ATPases associated with a variety of cellular activities CH47_RS16530 SM00382 ATPases associated with a variety of cellular activities CH47_RS16535 SM00382 ATPases associated with a variety of cellular activities CH47_RS16570 SM00382 ATPases associated with a variety of cellular activities CH47_RS16575 SM00382 ATPases associated with a variety of cellular activities CH47_RS16575 SM00962 SRP54-type protein, GTPase domain CH47_RS16575 SM00963 SRP54-type protein, helical bundle domain CH47_RS16670 SM00341 Helicase and RNase D C-terminal CH47_RS16670 SM00487 DEAD-like helicases superfamily CH47_RS16670 SM00490 helicase superfamily c-terminal domain CH47_RS16670 SM00956 CH47_RS16670 CH47_RS16740 SM01219 CH47_RS16740 CH47_RS16835 SM00984 UDP binding domain CH47_RS16855 SM00357 Cold shock protein domain CH47_RS16855 SM00382 ATPases associated with a variety of cellular activities CH47_RS16855 SM00959 Rho termination factor, N-terminal domain CH47_RS16865 SM00487 DEAD-like helicases superfamily CH47_RS16865 SM00490 helicase superfamily c-terminal domain CH47_RS16875 SM00060 Fibronectin type 3 domain CH47_RS16990 SM00382 ATPases associated with a variety of cellular activities CH47_RS17015 SM00382 ATPases associated with a variety of cellular activities CH47_RS17120 SM00382 ATPases associated with a variety of cellular activities CH47_RS17160 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH47_RS17215 SM00487 DEAD-like helicases superfamily CH47_RS17215 SM00490 helicase superfamily c-terminal domain CH47_RS17220 SM00354 helix_turn _helix lactose operon repressor CH47_RS17235 SM00382 ATPases associated with a variety of cellular activities CH47_RS17235 SM01086 C-terminal, D2-small domain, of ClpB protein CH47_RS17320 SM00448 cheY-homologous receiver domain CH47_RS17320 SM00862 Transcriptional regulatory protein, C terminal CH47_RS17325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS17325 SM00387 Histidine kinase-like ATPases CH47_RS17325 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS17330 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS17340 SM00971 Serine acetyltransferase, N-terminal CH47_RS17360 SM00450 Rhodanese Homology Domain CH47_RS17380 SM00829 Enoylreductase CH47_RS17420 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CH47_RS17420 SM01232 CH47_RS17420 CH47_RS17505 SM00493 CH47_RS17505 CH47_RS17505 SM00778 Zinc-binding domain of primase-helicase CH47_RS17530 SM00849 Metallo-beta-lactamase superfamily CH47_RS17535 SM00052 Putative diguanylate phosphodiesterase CH47_RS17535 SM00091 PAS domain CH47_RS17535 SM00267 diguanylate cyclase CH47_RS17560 SM00532 Ligase N family CH47_RS17565 SM00072 Guanylate kinase homologues. CH47_RS17570 SM01409 CH47_RS17570 CH47_RS17575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH47_RS17575 SM00954 Region found in RelA / SpoT proteins CH47_RS17585 SM00487 DEAD-like helicases superfamily CH47_RS17585 SM00490 helicase superfamily c-terminal domain CH47_RS17605 SM00421 helix_turn_helix, Lux Regulon CH47_RS17610 SM00421 helix_turn_helix, Lux Regulon CH47_RS17615 SM00421 helix_turn_helix, Lux Regulon CH47_RS17620 SM00421 helix_turn_helix, Lux Regulon CH47_RS17625 SM00421 helix_turn_helix, Lux Regulon CH47_RS17660 SM01230 CH47_RS17660 CH47_RS17665 SM00091 PAS domain CH47_RS17665 SM00387 Histidine kinase-like ATPases CH47_RS17665 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS17670 SM00382 ATPases associated with a variety of cellular activities CH47_RS17670 SM00448 cheY-homologous receiver domain CH47_RS17675 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS17690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CH47_RS17690 SM00474 3'-5' exonuclease CH47_RS17690 SM00475 5'-3' exonuclease CH47_RS17690 SM00482 DNA polymerase A domain CH47_RS17740 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS17740 SM00895 CH47_RS17740 CH47_RS17750 SM00354 helix_turn _helix lactose operon repressor CH47_RS17770 SM00382 ATPases associated with a variety of cellular activities CH47_RS17785 SM00382 ATPases associated with a variety of cellular activities CH47_RS17805 SM00344 helix_turn_helix ASNC type CH47_RS17815 SM01228 CH47_RS17815 CH47_RS17860 SM00382 ATPases associated with a variety of cellular activities CH47_RS17900 SM00382 ATPases associated with a variety of cellular activities CH47_RS17915 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS17945 SM00421 helix_turn_helix, Lux Regulon CH47_RS17945 SM00448 cheY-homologous receiver domain CH47_RS17950 SM00387 Histidine kinase-like ATPases CH47_RS17950 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS17960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS17960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS17970 SM00382 ATPases associated with a variety of cellular activities CH47_RS17970 SM00930 CH47_RS17970 CH47_RS18005 SM00382 ATPases associated with a variety of cellular activities CH47_RS18005 SM00760 Bacterial dnaA protein helix-turn-helix domain CH47_RS18010 SM00480 DNA polymerase III beta subunit CH47_RS18020 SM00387 Histidine kinase-like ATPases CH47_RS18020 SM00433 TopoisomeraseII CH47_RS18090 SM00642 Alpha-amylase domain CH47_RS18175 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS18185 SM00966 SpoVT / AbrB like domain CH47_RS18200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS18200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS18200 SM01358 CH47_RS18200 CH47_RS18215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CH47_RS18250 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS18270 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS18300 SM00382 ATPases associated with a variety of cellular activities CH47_RS18310 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS18375 SM00354 helix_turn _helix lactose operon repressor CH47_RS18455 SM00421 helix_turn_helix, Lux Regulon CH47_RS18455 SM00448 cheY-homologous receiver domain CH47_RS18460 SM00387 Histidine kinase-like ATPases CH47_RS18475 SM00912 haemagglutination activity domain CH47_RS18485 SM00912 haemagglutination activity domain CH47_RS18505 SM00382 ATPases associated with a variety of cellular activities CH47_RS18510 SM00382 ATPases associated with a variety of cellular activities CH47_RS18555 SM00028 Tetratricopeptide repeats CH47_RS18560 SM00052 Putative diguanylate phosphodiesterase CH47_RS18600 SM00052 Putative diguanylate phosphodiesterase CH47_RS18620 SM00869 Autotransporter beta-domain CH47_RS18645 SM00235 Zinc-dependent metalloprotease CH47_RS18650 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CH47_RS18795 SM00354 helix_turn _helix lactose operon repressor CH47_RS18815 SM00859 Semialdehyde dehydrogenase, NAD binding domain CH47_RS18840 SM00642 Alpha-amylase domain CH47_RS18845 SM00642 Alpha-amylase domain CH47_RS18870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CH47_RS18870 SM00387 Histidine kinase-like ATPases CH47_RS18870 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS18875 SM00448 cheY-homologous receiver domain CH47_RS18875 SM00862 Transcriptional regulatory protein, C terminal CH47_RS18895 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS18895 SM00732 Likely ribonuclease with RNase H fold. CH47_RS18900 SM00899 CH47_RS18900 CH47_RS18945 SM00421 helix_turn_helix, Lux Regulon CH47_RS18950 SM00450 Rhodanese Homology Domain CH47_RS18960 SM00420 helix_turn_helix, Deoxyribose operon repressor CH47_RS18960 SM01134 CH47_RS18960 CH47_RS18975 SM00363 S4 RNA-binding domain CH47_RS19090 SM00354 helix_turn _helix lactose operon repressor CH47_RS19105 SM00382 ATPases associated with a variety of cellular activities CH47_RS19125 SM00100 Cyclic nucleotide-monophosphate binding domain CH47_RS19125 SM00419 helix_turn_helix, cAMP Regulatory protein CH47_RS19160 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS19165 SM00382 ATPases associated with a variety of cellular activities CH47_RS19190 SM00382 ATPases associated with a variety of cellular activities CH47_RS19255 SM00838 Elongation factor G C-terminus CH47_RS19255 SM00889 Elongation factor G, domain IV CH47_RS19275 SM01403 CH47_RS19275 CH47_RS19295 SM01382 CH47_RS19295 CH47_RS19295 SM01383 CH47_RS19295 CH47_RS19310 SM00322 K homology RNA-binding domain CH47_RS19330 SM01374 CH47_RS19330 CH47_RS19335 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CH47_RS19400 SM00363 S4 RNA-binding domain CH47_RS19400 SM01390 CH47_RS19400 CH47_RS19405 SM00662 RNA polymerases D CH47_RS19420 SM00422 helix_turn_helix, mercury resistance CH47_RS19540 SM00346 helix_turn_helix isocitrate lyase regulation CH47_RS19545 SM01018 B12 binding domain CH47_RS19590 SM00382 ATPases associated with a variety of cellular activities CH47_RS19620 SM00563 Phosphate acyltransferases CH47_RS19695 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS19725 SM01252 CH47_RS19725 CH47_RS19745 SM00344 helix_turn_helix ASNC type CH47_RS19790 SM01252 CH47_RS19790 CH47_RS19965 SM00829 Enoylreductase CH47_RS19970 SM00382 ATPases associated with a variety of cellular activities CH47_RS19975 SM01005 Alanine racemase, C-terminal domain CH47_RS20005 SM00530 Helix-turn-helix XRE-family like proteins CH47_RS20040 SM00382 ATPases associated with a variety of cellular activities CH47_RS20055 SM00062 Bacterial periplasmic substrate-binding proteins CH47_RS20080 SM00357 Cold shock protein domain CH47_RS20085 SM00357 Cold shock protein domain CH47_RS20095 SM00267 diguanylate cyclase CH47_RS20125 SM00878 Biotin carboxylase C-terminal domain CH47_RS20150 SM00829 Enoylreductase CH47_RS20180 SM00316 Ribosomal protein S1-like RNA-binding domain CH47_RS20305 SM00831 Cation transporter/ATPase, N-terminus CH47_RS20310 SM00354 helix_turn _helix lactose operon repressor CH47_RS20320 SM00642 Alpha-amylase domain CH47_RS20330 SM00460 Transglutaminase/protease-like homologues CH47_RS20405 SM00382 ATPases associated with a variety of cellular activities CH47_RS20435 SM00382 ATPases associated with a variety of cellular activities CH47_RS20470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH47_RS20475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CH47_RS20525 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS20530 SM00073 Histidine Phosphotransfer domain CH47_RS20530 SM00091 PAS domain CH47_RS20530 SM00387 Histidine kinase-like ATPases CH47_RS20530 SM00388 His Kinase A (phosphoacceptor) domain CH47_RS20530 SM00448 cheY-homologous receiver domain CH47_RS20545 SM00749 bacterial OsmY and nodulation domain CH47_RS20585 SM00829 Enoylreductase CH47_RS20645 SM00345 helix_turn_helix gluconate operon transcriptional repressor CH47_RS20645 SM00895 CH47_RS20645 CH47_RS20665 SM00858 CH47_RS20665 CH47_RS20695 SM00869 Autotransporter beta-domain CH47_RS20790 SM00400 zinc finger CH47_RS20790 SM00493 CH47_RS20790 CH47_RS20790 SM00766 DNA primase DnaG DnaB-binding CH47_RS20805 SM01207 CH47_RS20805 CH47_RS20810 SM00905 Dihydroneopterin aldolase CH47_RS20820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CH47_RS20825 SM00287 Bacterial SH3 domain homologues CH47_RS20830 SM01118 CH47_RS20830 CH47_RS20905 SM00387 Histidine kinase-like ATPases CH47_RS20905 SM00433 TopoisomeraseII CH47_RS20925 SM00434 DNA Topoisomerase IV CH47_RS20930 SM00563 Phosphate acyltransferases CH47_RS20940 SM00729 Elongator protein 3, MiaB family, Radical SAM CH47_RS20955 SM00342 helix_turn_helix, arabinose operon control protein CH47_RS21090 SM00382 ATPases associated with a variety of cellular activities CH47_RS21125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CH47_RS21140 SM00862 Transcriptional regulatory protein, C terminal CH47_RS21205 SM00421 helix_turn_helix, Lux Regulon