BB936_RS00005 SM00382 ATPases associated with a variety of cellular activities BB936_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BB936_RS00010 SM00480 DNA polymerase III beta subunit BB936_RS00020 SM00387 Histidine kinase-like ATPases BB936_RS00020 SM00433 TopoisomeraseII BB936_RS00075 SM00642 Alpha-amylase domain BB936_RS00155 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS00165 SM00966 SpoVT / AbrB like domain BB936_RS00180 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS00180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS00180 SM01358 BB936_RS00180 BB936_RS00195 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BB936_RS00240 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS00270 SM00382 ATPases associated with a variety of cellular activities BB936_RS00280 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS00315 SM00778 Zinc-binding domain of primase-helicase BB936_RS00315 SM00885 D5 N terminal like BB936_RS00425 SM00052 Putative diguanylate phosphodiesterase BB936_RS00425 SM00091 PAS domain BB936_RS00425 SM00267 diguanylate cyclase BB936_RS00435 SM00849 Metallo-beta-lactamase superfamily BB936_RS00475 SM00778 Zinc-binding domain of primase-helicase BB936_RS00575 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BB936_RS00575 SM01232 BB936_RS00575 BB936_RS00615 SM00829 Enoylreductase BB936_RS00645 SM00450 Rhodanese Homology Domain BB936_RS00665 SM00971 Serine acetyltransferase, N-terminal BB936_RS00675 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS00680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS00680 SM00387 Histidine kinase-like ATPases BB936_RS00680 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS00685 SM00448 cheY-homologous receiver domain BB936_RS00685 SM00862 Transcriptional regulatory protein, C terminal BB936_RS00780 SM00382 ATPases associated with a variety of cellular activities BB936_RS00780 SM01086 C-terminal, D2-small domain, of ClpB protein BB936_RS00795 SM00354 helix_turn _helix lactose operon repressor BB936_RS00800 SM00487 DEAD-like helicases superfamily BB936_RS00800 SM00490 helicase superfamily c-terminal domain BB936_RS00840 SM00859 Semialdehyde dehydrogenase, NAD binding domain BB936_RS00875 SM00382 ATPases associated with a variety of cellular activities BB936_RS00980 SM00382 ATPases associated with a variety of cellular activities BB936_RS01005 SM00382 ATPases associated with a variety of cellular activities BB936_RS01110 SM00354 helix_turn _helix lactose operon repressor BB936_RS01145 SM00912 haemagglutination activity domain BB936_RS01160 SM00912 haemagglutination activity domain BB936_RS01175 SM00387 Histidine kinase-like ATPases BB936_RS01180 SM00421 helix_turn_helix, Lux Regulon BB936_RS01180 SM00448 cheY-homologous receiver domain BB936_RS01215 SM00382 ATPases associated with a variety of cellular activities BB936_RS01220 SM00382 ATPases associated with a variety of cellular activities BB936_RS01265 SM00028 Tetratricopeptide repeats BB936_RS01275 SM00052 Putative diguanylate phosphodiesterase BB936_RS01315 SM00052 Putative diguanylate phosphodiesterase BB936_RS01335 SM00869 Autotransporter beta-domain BB936_RS01365 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BB936_RS01405 SM00382 ATPases associated with a variety of cellular activities BB936_RS01455 SM00954 Region found in RelA / SpoT proteins BB936_RS01590 SM00354 helix_turn _helix lactose operon repressor BB936_RS01610 SM00859 Semialdehyde dehydrogenase, NAD binding domain BB936_RS01635 SM00642 Alpha-amylase domain BB936_RS01640 SM00642 Alpha-amylase domain BB936_RS01675 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS01675 SM01134 BB936_RS01675 BB936_RS01685 SM00450 Rhodanese Homology Domain BB936_RS01695 SM00421 helix_turn_helix, Lux Regulon BB936_RS01750 SM00899 BB936_RS01750 BB936_RS01755 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS01755 SM00732 Likely ribonuclease with RNase H fold. BB936_RS01785 SM00448 cheY-homologous receiver domain BB936_RS01785 SM00862 Transcriptional regulatory protein, C terminal BB936_RS01790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS01790 SM00387 Histidine kinase-like ATPases BB936_RS01790 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS01805 SM00363 S4 RNA-binding domain BB936_RS01920 SM00354 helix_turn _helix lactose operon repressor BB936_RS01935 SM00382 ATPases associated with a variety of cellular activities BB936_RS01955 SM00100 Cyclic nucleotide-monophosphate binding domain BB936_RS01955 SM00419 helix_turn_helix, cAMP Regulatory protein BB936_RS01990 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS01995 SM00382 ATPases associated with a variety of cellular activities BB936_RS02020 SM00382 ATPases associated with a variety of cellular activities BB936_RS02085 SM00838 Elongation factor G C-terminus BB936_RS02085 SM00889 Elongation factor G, domain IV BB936_RS02105 SM01403 BB936_RS02105 BB936_RS02125 SM01382 BB936_RS02125 BB936_RS02125 SM01383 BB936_RS02125 BB936_RS02140 SM00322 K homology RNA-binding domain BB936_RS02160 SM01374 BB936_RS02160 BB936_RS02165 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BB936_RS02230 SM00363 S4 RNA-binding domain BB936_RS02230 SM01390 BB936_RS02230 BB936_RS02235 SM00662 RNA polymerases D BB936_RS02250 SM00422 helix_turn_helix, mercury resistance BB936_RS02370 SM00346 helix_turn_helix isocitrate lyase regulation BB936_RS02375 SM01018 B12 binding domain BB936_RS02380 SM00912 haemagglutination activity domain BB936_RS02430 SM00382 ATPases associated with a variety of cellular activities BB936_RS02460 SM00563 Phosphate acyltransferases BB936_RS02505 SM00829 Enoylreductase BB936_RS02510 SM00382 ATPases associated with a variety of cellular activities BB936_RS02515 SM01005 Alanine racemase, C-terminal domain BB936_RS02545 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS02580 SM00382 ATPases associated with a variety of cellular activities BB936_RS02595 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS02620 SM00357 Cold shock protein domain BB936_RS02625 SM00357 Cold shock protein domain BB936_RS02665 SM00878 Biotin carboxylase C-terminal domain BB936_RS02690 SM00829 Enoylreductase BB936_RS02695 SM00052 Putative diguanylate phosphodiesterase BB936_RS02695 SM00267 diguanylate cyclase BB936_RS02720 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS03090 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS03105 SM00354 helix_turn _helix lactose operon repressor BB936_RS03115 SM00642 Alpha-amylase domain BB936_RS03125 SM00460 Transglutaminase/protease-like homologues BB936_RS03180 SM00382 ATPases associated with a variety of cellular activities BB936_RS03210 SM00382 ATPases associated with a variety of cellular activities BB936_RS03245 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BB936_RS03250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BB936_RS03310 SM00073 Histidine Phosphotransfer domain BB936_RS03310 SM00091 PAS domain BB936_RS03310 SM00387 Histidine kinase-like ATPases BB936_RS03310 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS03310 SM00448 cheY-homologous receiver domain BB936_RS03325 SM00749 bacterial OsmY and nodulation domain BB936_RS03365 SM00857 Resolvase, N terminal domain BB936_RS03385 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS03425 SM00829 Enoylreductase BB936_RS03485 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS03485 SM00895 BB936_RS03485 BB936_RS03505 SM00858 BB936_RS03505 BB936_RS03540 SM00869 Autotransporter beta-domain BB936_RS03555 SM00869 Autotransporter beta-domain BB936_RS03655 SM00400 zinc finger BB936_RS03655 SM00493 BB936_RS03655 BB936_RS03655 SM00766 DNA primase DnaG DnaB-binding BB936_RS03670 SM01207 BB936_RS03670 BB936_RS03675 SM00905 Dihydroneopterin aldolase BB936_RS03685 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BB936_RS03690 SM00287 Bacterial SH3 domain homologues BB936_RS03695 SM01118 BB936_RS03695 BB936_RS03770 SM00387 Histidine kinase-like ATPases BB936_RS03770 SM00433 TopoisomeraseII BB936_RS03790 SM00434 DNA Topoisomerase IV BB936_RS03795 SM00563 Phosphate acyltransferases BB936_RS03805 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS03820 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS03945 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS03970 SM00382 ATPases associated with a variety of cellular activities BB936_RS04010 SM00858 BB936_RS04010 BB936_RS04215 SM00052 Putative diguanylate phosphodiesterase BB936_RS04215 SM00091 PAS domain BB936_RS04215 SM00267 diguanylate cyclase BB936_RS04260 SM00354 helix_turn _helix lactose operon repressor BB936_RS04280 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS04315 SM00382 ATPases associated with a variety of cellular activities BB936_RS04440 SM00478 endonuclease III BB936_RS04440 SM00525 BB936_RS04440 BB936_RS04465 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS04475 SM01152 BB936_RS04475 BB936_RS04510 SM00732 Likely ribonuclease with RNase H fold. BB936_RS04535 SM00731 SprT homologues. BB936_RS04540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BB936_RS04575 SM00861 Transketolase, pyrimidine binding domain BB936_RS04580 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB936_RS04595 SM00194 Protein tyrosine phosphatase, catalytic domain BB936_RS04595 SM00404 Protein tyrosine phosphatase, catalytic domain motif BB936_RS04775 SM00257 Lysin motif BB936_RS04785 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BB936_RS04785 SM00534 ATPase domain of DNA mismatch repair MUTS family BB936_RS04855 SM00382 ATPases associated with a variety of cellular activities BB936_RS04865 SM00382 ATPases associated with a variety of cellular activities BB936_RS04875 SM00825 Beta-ketoacyl synthase BB936_RS04890 SM00822 BB936_RS04890 BB936_RS04905 SM01235 BB936_RS04905 BB936_RS04920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BB936_RS04960 SM01012 BB936_RS04960 BB936_RS04975 SM00382 ATPases associated with a variety of cellular activities BB936_RS05005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BB936_RS05040 SM00382 ATPases associated with a variety of cellular activities BB936_RS05050 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BB936_RS05105 SM00382 ATPases associated with a variety of cellular activities BB936_RS05105 SM00962 SRP54-type protein, GTPase domain BB936_RS05105 SM00963 SRP54-type protein, helical bundle domain BB936_RS05140 SM00448 cheY-homologous receiver domain BB936_RS05140 SM00850 LytTr DNA-binding domain BB936_RS05150 SM00830 Chorismate mutase type II BB936_RS05155 SM00830 Chorismate mutase type II BB936_RS05165 SM00382 ATPases associated with a variety of cellular activities BB936_RS05165 SM01086 C-terminal, D2-small domain, of ClpB protein BB936_RS05175 SM00363 S4 RNA-binding domain BB936_RS05235 SM00155 Phospholipase D. Active site motifs. BB936_RS05240 SM00881 CoA binding domain BB936_RS05245 SM01144 BB936_RS05245 BB936_RS05255 SM00967 RNA 2'-O ribose methyltransferase substrate binding BB936_RS05285 SM00347 helix_turn_helix multiple antibiotic resistance protein BB936_RS05330 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS05345 SM00382 ATPases associated with a variety of cellular activities BB936_RS05485 SM00382 ATPases associated with a variety of cellular activities BB936_RS05700 SM01007 Class II Aldolase and Adducin N-terminal domain BB936_RS05730 SM00710 Parallel beta-helix repeats BB936_RS05770 SM00900 BB936_RS05770 BB936_RS05855 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BB936_RS05865 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS05865 SM00866 BB936_RS05865 BB936_RS05885 SM01068 Putative carbohydrate binding domain BB936_RS05955 SM00448 cheY-homologous receiver domain BB936_RS05955 SM00862 Transcriptional regulatory protein, C terminal BB936_RS05960 SM00091 PAS domain BB936_RS05960 SM00387 Histidine kinase-like ATPases BB936_RS05960 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS05980 SM00642 Alpha-amylase domain BB936_RS06030 SM01323 BB936_RS06030 BB936_RS06090 SM00861 Transketolase, pyrimidine binding domain BB936_RS06105 SM00981 BB936_RS06105 BB936_RS06190 SM00382 ATPases associated with a variety of cellular activities BB936_RS06190 SM00994 ClpX C4-type zinc finger BB936_RS06190 SM01086 C-terminal, D2-small domain, of ClpB protein BB936_RS06195 SM00382 ATPases associated with a variety of cellular activities BB936_RS06195 SM00464 Found in ATP-dependent protease La (LON) BB936_RS06200 SM00411 bacterial (prokaryotic) histone like domain BB936_RS06210 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BB936_RS06240 SM00344 helix_turn_helix ASNC type BB936_RS06245 SM00382 ATPases associated with a variety of cellular activities BB936_RS06250 SM00382 ATPases associated with a variety of cellular activities BB936_RS06255 SM00938 Nitrogen regulatory protein P-II BB936_RS06300 SM00382 ATPases associated with a variety of cellular activities BB936_RS06395 SM00382 ATPases associated with a variety of cellular activities BB936_RS06405 SM00493 BB936_RS06405 BB936_RS06410 SM00387 Histidine kinase-like ATPases BB936_RS06510 SM00422 helix_turn_helix, mercury resistance BB936_RS06520 SM00244 prohibitin homologues BB936_RS06530 SM00822 BB936_RS06530 BB936_RS06540 SM00382 ATPases associated with a variety of cellular activities BB936_RS06555 SM01001 AIR carboxylase BB936_RS06570 SM00840 BB936_RS06570 BB936_RS06700 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS06725 SM00382 ATPases associated with a variety of cellular activities BB936_RS06765 SM00507 HNH nucleases BB936_RS07040 SM00448 cheY-homologous receiver domain BB936_RS07040 SM00862 Transcriptional regulatory protein, C terminal BB936_RS07055 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BB936_RS07070 SM00382 ATPases associated with a variety of cellular activities BB936_RS07105 SM00357 Cold shock protein domain BB936_RS07115 SM00267 diguanylate cyclase BB936_RS07125 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS07140 SM00936 Penicillin-binding protein 5, C-terminal domain BB936_RS07195 SM00382 ATPases associated with a variety of cellular activities BB936_RS07210 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS07225 SM00116 Domain in cystathionine beta-synthase and other proteins. BB936_RS07225 SM01091 Transporter associated domain BB936_RS07240 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS07325 SM01081 Putative carbohydrate binding domain BB936_RS07340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS07375 SM00448 cheY-homologous receiver domain BB936_RS07375 SM00862 Transcriptional regulatory protein, C terminal BB936_RS07380 SM00387 Histidine kinase-like ATPases BB936_RS07380 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS07445 SM00796 Allophanate hydrolase subunit 1 BB936_RS07450 SM00797 Allophanate hydrolase subunit 2 BB936_RS07500 SM00861 Transketolase, pyrimidine binding domain BB936_RS07515 SM00881 CoA binding domain BB936_RS07615 SM00855 Phosphoglycerate mutase family BB936_RS07620 SM00477 DNA/RNA non-specific endonuclease BB936_RS07620 SM00892 DNA/RNA non-specific endonuclease BB936_RS07665 SM00382 ATPases associated with a variety of cellular activities BB936_RS07705 SM00994 ClpX C4-type zinc finger BB936_RS07780 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS07790 SM01040 BRO family, N-terminal domain BB936_RS07990 SM00382 ATPases associated with a variety of cellular activities BB936_RS08010 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS08010 SM00876 Biotin and Thiamin Synthesis associated domain BB936_RS08030 SM00382 ATPases associated with a variety of cellular activities BB936_RS08035 SM00487 DEAD-like helicases superfamily BB936_RS08035 SM00490 helicase superfamily c-terminal domain BB936_RS08050 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS08085 SM00382 ATPases associated with a variety of cellular activities BB936_RS08100 SM00487 DEAD-like helicases superfamily BB936_RS08100 SM00490 helicase superfamily c-terminal domain BB936_RS08115 SM00116 Domain in cystathionine beta-synthase and other proteins. BB936_RS08130 SM01118 BB936_RS08130 BB936_RS08135 SM00507 HNH nucleases BB936_RS08150 SM00382 ATPases associated with a variety of cellular activities BB936_RS08195 SM00382 ATPases associated with a variety of cellular activities BB936_RS08200 SM00450 Rhodanese Homology Domain BB936_RS08225 SM00382 ATPases associated with a variety of cellular activities BB936_RS08270 SM00487 DEAD-like helicases superfamily BB936_RS08270 SM00488 BB936_RS08270 BB936_RS08270 SM00491 BB936_RS08270 BB936_RS08295 SM00903 Flavin reductase like domain BB936_RS08305 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS08305 SM00091 PAS domain BB936_RS08305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS08315 SM00382 ATPases associated with a variety of cellular activities BB936_RS08325 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS08325 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BB936_RS08355 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BB936_RS08395 SM00382 ATPases associated with a variety of cellular activities BB936_RS08410 SM00852 Probable molybdopterin binding domain BB936_RS08425 SM00382 ATPases associated with a variety of cellular activities BB936_RS08450 SM00829 Enoylreductase BB936_RS08475 SM00354 helix_turn _helix lactose operon repressor BB936_RS08485 SM00382 ATPases associated with a variety of cellular activities BB936_RS08495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BB936_RS08495 SM00382 ATPases associated with a variety of cellular activities BB936_RS08580 SM00919 Malic enzyme, NAD binding domain BB936_RS08580 SM01274 BB936_RS08580 BB936_RS08655 SM01091 Transporter associated domain BB936_RS08690 SM00382 ATPases associated with a variety of cellular activities BB936_RS08760 SM01350 BB936_RS08760 BB936_RS08820 SM00382 ATPases associated with a variety of cellular activities BB936_RS08870 SM00382 ATPases associated with a variety of cellular activities BB936_RS08905 SM00877 BB936_RS08905 BB936_RS08910 SM00877 BB936_RS08910 BB936_RS08925 SM00877 BB936_RS08925 BB936_RS08930 SM00877 BB936_RS08930 BB936_RS08960 SM00877 BB936_RS08960 BB936_RS08965 SM00877 BB936_RS08965 BB936_RS08975 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS09055 SM00382 ATPases associated with a variety of cellular activities BB936_RS09075 SM00855 Phosphoglycerate mutase family BB936_RS09095 SM00421 helix_turn_helix, Lux Regulon BB936_RS09140 SM00382 ATPases associated with a variety of cellular activities BB936_RS09140 SM01086 C-terminal, D2-small domain, of ClpB protein BB936_RS09250 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS09250 SM01134 BB936_RS09250 BB936_RS09260 SM00260 Two component signalling adaptor domain BB936_RS09260 SM00448 cheY-homologous receiver domain BB936_RS09270 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS09290 SM00382 ATPases associated with a variety of cellular activities BB936_RS09310 SM00387 Histidine kinase-like ATPases BB936_RS09315 SM00421 helix_turn_helix, Lux Regulon BB936_RS09315 SM00448 cheY-homologous receiver domain BB936_RS09320 SM00448 cheY-homologous receiver domain BB936_RS09325 SM00387 Histidine kinase-like ATPases BB936_RS09335 SM00091 PAS domain BB936_RS09340 SM00764 Citrate lyase ligase C-terminal domain BB936_RS09540 SM00344 helix_turn_helix ASNC type BB936_RS09550 SM00829 Enoylreductase BB936_RS09560 SM01038 Beta galactosidase small chain BB936_RS09565 SM00354 helix_turn _helix lactose operon repressor BB936_RS09570 SM00357 Cold shock protein domain BB936_RS09580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS09580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS09600 SM00831 Cation transporter/ATPase, N-terminus BB936_RS09605 SM00829 Enoylreductase BB936_RS09635 SM00073 Histidine Phosphotransfer domain BB936_RS09635 SM00260 Two component signalling adaptor domain BB936_RS09635 SM00387 Histidine kinase-like ATPases BB936_RS09635 SM01231 BB936_RS09635 BB936_RS09640 SM00260 Two component signalling adaptor domain BB936_RS09645 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS09645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS09645 SM00319 Homologues of the ligand binding domain of Tar BB936_RS09650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS09650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS09650 SM00319 Homologues of the ligand binding domain of Tar BB936_RS09655 SM00138 Methyltransferase, chemotaxis proteins BB936_RS09660 SM00448 cheY-homologous receiver domain BB936_RS09665 SM00448 cheY-homologous receiver domain BB936_RS09710 SM00858 BB936_RS09710 BB936_RS09755 SM00047 Lysozyme subfamily 2 BB936_RS09815 SM00382 ATPases associated with a variety of cellular activities BB936_RS09860 SM00478 endonuclease III BB936_RS09865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BB936_RS09870 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS09920 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS09920 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BB936_RS09930 SM00382 ATPases associated with a variety of cellular activities BB936_RS09995 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS10015 SM00903 Flavin reductase like domain BB936_RS10090 SM00642 Alpha-amylase domain BB936_RS10110 SM00421 helix_turn_helix, Lux Regulon BB936_RS10110 SM00448 cheY-homologous receiver domain BB936_RS10115 SM00465 GIY-YIG type nucleases (URI domain) BB936_RS10305 SM00479 BB936_RS10305 BB936_RS10340 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS10445 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS10525 SM01400 BB936_RS10525 BB936_RS10545 SM00937 BB936_RS10545 BB936_RS10575 SM00267 diguanylate cyclase BB936_RS10600 SM00481 DNA polymerase alpha chain like domain BB936_RS10675 SM00870 BB936_RS10675 BB936_RS10695 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BB936_RS10695 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BB936_RS10695 SM00493 BB936_RS10695 BB936_RS10750 SM00448 cheY-homologous receiver domain BB936_RS10755 SM00984 UDP binding domain BB936_RS10760 SM00528 Domain in histone-like proteins of HNS family BB936_RS10805 SM00382 ATPases associated with a variety of cellular activities BB936_RS10810 SM00382 ATPases associated with a variety of cellular activities BB936_RS10820 SM00155 Phospholipase D. Active site motifs. BB936_RS10825 SM00052 Putative diguanylate phosphodiesterase BB936_RS10875 SM00749 bacterial OsmY and nodulation domain BB936_RS10910 SM00481 DNA polymerase alpha chain like domain BB936_RS10920 SM00363 S4 RNA-binding domain BB936_RS10935 SM00822 BB936_RS10935 BB936_RS10950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BB936_RS10950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BB936_RS10950 SM00493 BB936_RS10950 BB936_RS10975 SM00014 Acid phosphatase homologues BB936_RS10985 SM00028 Tetratricopeptide repeats BB936_RS10995 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS11010 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BB936_RS11030 SM01007 Class II Aldolase and Adducin N-terminal domain BB936_RS11040 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS11040 SM01134 BB936_RS11040 BB936_RS11060 SM00357 Cold shock protein domain BB936_RS11060 SM00955 BB936_RS11060 BB936_RS11175 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS11200 SM00382 ATPases associated with a variety of cellular activities BB936_RS11235 SM00507 HNH nucleases BB936_RS11315 SM00478 endonuclease III BB936_RS11315 SM00525 BB936_RS11315 BB936_RS11325 SM00900 BB936_RS11325 BB936_RS11335 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS11370 SM00382 ATPases associated with a variety of cellular activities BB936_RS11400 SM00382 ATPases associated with a variety of cellular activities BB936_RS11410 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS11440 SM00354 helix_turn _helix lactose operon repressor BB936_RS11465 SM00421 helix_turn_helix, Lux Regulon BB936_RS11545 SM00644 BB936_RS11545 BB936_RS11590 SM00822 BB936_RS11590 BB936_RS11595 SM00871 Bacterial transcription activator, effector binding domain BB936_RS11615 SM00100 Cyclic nucleotide-monophosphate binding domain BB936_RS11615 SM00419 helix_turn_helix, cAMP Regulatory protein BB936_RS11630 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BB936_RS11630 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BB936_RS11655 SM00448 cheY-homologous receiver domain BB936_RS11655 SM00862 Transcriptional regulatory protein, C terminal BB936_RS11660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS11660 SM00387 Histidine kinase-like ATPases BB936_RS11660 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS11675 SM00020 Trypsin-like serine protease BB936_RS11680 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS11690 SM00382 ATPases associated with a variety of cellular activities BB936_RS11690 SM00487 DEAD-like helicases superfamily BB936_RS11690 SM00490 helicase superfamily c-terminal domain BB936_RS11690 SM00847 Helicase associated domain (HA2) Add an annotation BB936_RS11740 SM00148 Phospholipase C, catalytic domain (part); domain X BB936_RS11765 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BB936_RS11775 SM00091 PAS domain BB936_RS11775 SM00382 ATPases associated with a variety of cellular activities BB936_RS11785 SM00953 BB936_RS11785 BB936_RS11820 SM00382 ATPases associated with a variety of cellular activities BB936_RS11850 SM00382 ATPases associated with a variety of cellular activities BB936_RS11855 SM00382 ATPases associated with a variety of cellular activities BB936_RS11910 SM00363 S4 RNA-binding domain BB936_RS11935 SM00347 helix_turn_helix multiple antibiotic resistance protein BB936_RS11990 SM00479 BB936_RS11990 BB936_RS12010 SM00354 helix_turn _helix lactose operon repressor BB936_RS12080 SM00382 ATPases associated with a variety of cellular activities BB936_RS12205 SM00382 ATPases associated with a variety of cellular activities BB936_RS12230 SM00411 bacterial (prokaryotic) histone like domain BB936_RS12235 SM00873 B3/4 domain BB936_RS12235 SM00874 tRNA synthetase B5 domain BB936_RS12235 SM00896 Ferredoxin-fold anticodon binding domain BB936_RS12260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BB936_RS12310 SM00382 ATPases associated with a variety of cellular activities BB936_RS12400 SM00382 ATPases associated with a variety of cellular activities BB936_RS12430 SM00644 BB936_RS12430 BB936_RS12435 SM00346 helix_turn_helix isocitrate lyase regulation BB936_RS12460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BB936_RS12460 SM00245 tail specific protease BB936_RS12465 SM00945 ProQ/FINO family BB936_RS12470 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BB936_RS12495 SM00972 Spore Coat Protein U domain BB936_RS12500 SM00972 Spore Coat Protein U domain BB936_RS12505 SM00972 Spore Coat Protein U domain BB936_RS12515 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS12515 SM00091 PAS domain BB936_RS12515 SM00267 diguanylate cyclase BB936_RS12525 SM01022 BB936_RS12525 BB936_RS12610 SM00341 Helicase and RNase D C-terminal BB936_RS12610 SM00474 3'-5' exonuclease BB936_RS12630 SM00487 DEAD-like helicases superfamily BB936_RS12630 SM00491 BB936_RS12630 BB936_RS12685 SM00257 Lysin motif BB936_RS12695 SM00382 ATPases associated with a variety of cellular activities BB936_RS12710 SM00382 ATPases associated with a variety of cellular activities BB936_RS12715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BB936_RS12785 SM00363 S4 RNA-binding domain BB936_RS12805 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS12805 SM01134 BB936_RS12805 BB936_RS12845 SM00257 Lysin motif BB936_RS12855 SM00869 Autotransporter beta-domain BB936_RS12880 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS12880 SM00866 BB936_RS12880 BB936_RS12940 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS12955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS12955 SM00387 Histidine kinase-like ATPases BB936_RS12980 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BB936_RS12995 SM00763 PrkA AAA domain BB936_RS13025 SM00052 Putative diguanylate phosphodiesterase BB936_RS13025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BB936_RS13025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS13025 SM00091 PAS domain BB936_RS13025 SM00267 diguanylate cyclase BB936_RS13035 SM01005 Alanine racemase, C-terminal domain BB936_RS13050 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS13090 SM00836 DALR anticodon binding domain BB936_RS13090 SM01016 Arginyl tRNA synthetase N terminal dom BB936_RS13170 SM00382 ATPases associated with a variety of cellular activities BB936_RS13220 SM01007 Class II Aldolase and Adducin N-terminal domain BB936_RS13230 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS13230 SM01134 BB936_RS13230 BB936_RS13235 SM00387 Histidine kinase-like ATPases BB936_RS13240 SM00448 cheY-homologous receiver domain BB936_RS13375 SM00479 BB936_RS13375 BB936_RS13390 SM01022 BB936_RS13390 BB936_RS13400 SM00487 DEAD-like helicases superfamily BB936_RS13400 SM00490 helicase superfamily c-terminal domain BB936_RS13435 SM01091 Transporter associated domain BB936_RS13470 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS13470 SM00091 PAS domain BB936_RS13470 SM00267 diguanylate cyclase BB936_RS13495 SM00357 Cold shock protein domain BB936_RS13540 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS13560 SM00382 ATPases associated with a variety of cellular activities BB936_RS13565 SM00090 RIO-like kinase BB936_RS13580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS13580 SM00091 PAS domain BB936_RS13580 SM00267 diguanylate cyclase BB936_RS13600 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS13650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS13650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS13660 SM00354 helix_turn _helix lactose operon repressor BB936_RS13665 SM00640 Glycosyl hydrolases family 32 BB936_RS13720 SM01329 BB936_RS13720 BB936_RS13755 SM00448 cheY-homologous receiver domain BB936_RS13755 SM00862 Transcriptional regulatory protein, C terminal BB936_RS13760 SM00387 Histidine kinase-like ATPases BB936_RS13760 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS13765 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BB936_RS13790 SM00382 ATPases associated with a variety of cellular activities BB936_RS13800 SM00487 DEAD-like helicases superfamily BB936_RS13800 SM00490 helicase superfamily c-terminal domain BB936_RS13800 SM00982 BB936_RS13800 BB936_RS13800 SM01058 CarD-like/TRCF domain BB936_RS13865 SM00382 ATPases associated with a variety of cellular activities BB936_RS13905 SM00825 Beta-ketoacyl synthase BB936_RS13915 SM00822 BB936_RS13915 BB936_RS13920 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BB936_RS13950 SM00363 S4 RNA-binding domain BB936_RS13955 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS13985 SM00421 helix_turn_helix, Lux Regulon BB936_RS13995 SM00450 Rhodanese Homology Domain BB936_RS14015 SM00387 Histidine kinase-like ATPases BB936_RS14015 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS14020 SM00421 helix_turn_helix, Lux Regulon BB936_RS14020 SM00448 cheY-homologous receiver domain BB936_RS14085 SM01091 Transporter associated domain BB936_RS14100 SM00421 helix_turn_helix, Lux Regulon BB936_RS14170 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BB936_RS14175 SM00992 Hemimethylated DNA-binding protein YccV like BB936_RS14180 SM00881 CoA binding domain BB936_RS14190 SM00851 MGS-like domain BB936_RS14245 SM00825 Beta-ketoacyl synthase BB936_RS14265 SM00382 ATPases associated with a variety of cellular activities BB936_RS14270 SM00981 BB936_RS14270 BB936_RS14315 SM00052 Putative diguanylate phosphodiesterase BB936_RS14320 SM00849 Metallo-beta-lactamase superfamily BB936_RS14375 SM00357 Cold shock protein domain BB936_RS14380 SM00357 Cold shock protein domain BB936_RS14385 SM01150 BB936_RS14385 BB936_RS14395 SM00382 ATPases associated with a variety of cellular activities BB936_RS14400 SM00849 Metallo-beta-lactamase superfamily BB936_RS14405 SM00411 bacterial (prokaryotic) histone like domain BB936_RS14410 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS14435 SM00870 BB936_RS14435 BB936_RS14485 SM00382 ATPases associated with a variety of cellular activities BB936_RS14495 SM00843 BB936_RS14495 BB936_RS14500 SM00344 helix_turn_helix ASNC type BB936_RS14510 SM00382 ATPases associated with a variety of cellular activities BB936_RS14515 SM00382 ATPases associated with a variety of cellular activities BB936_RS14525 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS14530 SM00382 ATPases associated with a variety of cellular activities BB936_RS14530 SM01086 C-terminal, D2-small domain, of ClpB protein BB936_RS14540 SM00357 Cold shock protein domain BB936_RS14545 SM00382 ATPases associated with a variety of cellular activities BB936_RS14610 SM00382 ATPases associated with a variety of cellular activities BB936_RS14615 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS14615 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BB936_RS14630 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS14630 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BB936_RS14655 SM00382 ATPases associated with a variety of cellular activities BB936_RS14690 SM00014 Acid phosphatase homologues BB936_RS14695 SM01133 BB936_RS14695 BB936_RS14700 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS14700 SM01134 BB936_RS14700 BB936_RS14715 SM00936 Penicillin-binding protein 5, C-terminal domain BB936_RS14720 SM00116 Domain in cystathionine beta-synthase and other proteins. BB936_RS14735 SM00382 ATPases associated with a variety of cellular activities BB936_RS14735 SM00930 BB936_RS14735 BB936_RS14765 SM00382 ATPases associated with a variety of cellular activities BB936_RS14800 SM00518 AP endonuclease family 2 BB936_RS14825 SM00862 Transcriptional regulatory protein, C terminal BB936_RS14870 SM00841 Elongation factor P, C-terminal BB936_RS14870 SM01185 BB936_RS14870 BB936_RS14890 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS14890 SM00895 BB936_RS14890 BB936_RS14900 SM00833 Cobalamin synthesis protein cobW C-terminal domain BB936_RS14905 SM00014 Acid phosphatase homologues BB936_RS14920 SM00052 Putative diguanylate phosphodiesterase BB936_RS14940 SM00382 ATPases associated with a variety of cellular activities BB936_RS14955 SM00363 S4 RNA-binding domain BB936_RS14960 SM00487 DEAD-like helicases superfamily BB936_RS14960 SM00490 helicase superfamily c-terminal domain BB936_RS15030 SM01057 Eukaryotic-type carbonic anhydrase BB936_RS15070 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS15085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS15085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS15135 SM00387 Histidine kinase-like ATPases BB936_RS15135 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS15140 SM00421 helix_turn_helix, Lux Regulon BB936_RS15140 SM00448 cheY-homologous receiver domain BB936_RS15145 SM00387 Histidine kinase-like ATPases BB936_RS15145 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS15145 SM00448 cheY-homologous receiver domain BB936_RS15150 SM00434 DNA Topoisomerase IV BB936_RS15190 SM00852 Probable molybdopterin binding domain BB936_RS15205 SM01060 BB936_RS15205 BB936_RS15215 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BB936_RS15265 SM00354 helix_turn _helix lactose operon repressor BB936_RS15330 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BB936_RS15330 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BB936_RS15335 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BB936_RS15370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BB936_RS15410 SM00354 helix_turn _helix lactose operon repressor BB936_RS15445 SM00052 Putative diguanylate phosphodiesterase BB936_RS15460 SM00382 ATPases associated with a variety of cellular activities BB936_RS15475 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS15520 SM00859 Semialdehyde dehydrogenase, NAD binding domain BB936_RS15530 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS15545 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS15585 SM00354 helix_turn _helix lactose operon repressor BB936_RS15625 SM00825 Beta-ketoacyl synthase BB936_RS15665 SM00463 Small MutS-related domain BB936_RS15740 SM00382 ATPases associated with a variety of cellular activities BB936_RS15775 SM00778 Zinc-binding domain of primase-helicase BB936_RS15845 SM00354 helix_turn _helix lactose operon repressor BB936_RS15850 SM00867 YceI-like domain BB936_RS15880 SM00382 ATPases associated with a variety of cellular activities BB936_RS15925 SM00382 ATPases associated with a variety of cellular activities BB936_RS15970 SM00448 cheY-homologous receiver domain BB936_RS15970 SM00850 LytTr DNA-binding domain BB936_RS16075 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BB936_RS16075 SM00292 breast cancer carboxy-terminal domain BB936_RS16075 SM00532 Ligase N family BB936_RS16080 SM00771 ZipA, C-terminal domain (FtsZ-binding) BB936_RS16110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS16110 SM00387 Histidine kinase-like ATPases BB936_RS16110 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS16115 SM00448 cheY-homologous receiver domain BB936_RS16115 SM00862 Transcriptional regulatory protein, C terminal BB936_RS16125 SM00382 ATPases associated with a variety of cellular activities BB936_RS16135 SM00382 ATPases associated with a variety of cellular activities BB936_RS16180 SM01130 BB936_RS16180 BB936_RS16225 SM00919 Malic enzyme, NAD binding domain BB936_RS16225 SM01274 BB936_RS16225 BB936_RS16245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BB936_RS16260 SM00421 helix_turn_helix, Lux Regulon BB936_RS16260 SM00448 cheY-homologous receiver domain BB936_RS16380 SM01130 BB936_RS16380 BB936_RS16445 SM00382 ATPases associated with a variety of cellular activities BB936_RS16480 SM00052 Putative diguanylate phosphodiesterase BB936_RS16480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BB936_RS16480 SM00091 PAS domain BB936_RS16480 SM00267 diguanylate cyclase BB936_RS16510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS16510 SM00387 Histidine kinase-like ATPases BB936_RS16510 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS16515 SM00448 cheY-homologous receiver domain BB936_RS16515 SM00862 Transcriptional regulatory protein, C terminal BB936_RS16530 SM00046 Diacylglycerol kinase catalytic domain (presumed) BB936_RS16560 SM00420 helix_turn_helix, Deoxyribose operon repressor BB936_RS16560 SM01134 BB936_RS16560 BB936_RS16565 SM00116 Domain in cystathionine beta-synthase and other proteins. BB936_RS16675 SM00116 Domain in cystathionine beta-synthase and other proteins. BB936_RS16675 SM01240 BB936_RS16675 BB936_RS16700 SM00382 ATPases associated with a variety of cellular activities BB936_RS16710 SM00564 beta-propeller repeat BB936_RS16730 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS16735 SM00028 Tetratricopeptide repeats BB936_RS16745 SM00562 BB936_RS16745 BB936_RS16760 SM01359 BB936_RS16760 BB936_RS16760 SM01360 BB936_RS16760 BB936_RS16765 SM00869 Autotransporter beta-domain BB936_RS16795 SM00271 DnaJ molecular chaperone homology domain BB936_RS16890 SM00938 Nitrogen regulatory protein P-II BB936_RS16900 SM00382 ATPases associated with a variety of cellular activities BB936_RS16900 SM00448 cheY-homologous receiver domain BB936_RS16910 SM00387 Histidine kinase-like ATPases BB936_RS16910 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS16920 SM01211 BB936_RS16920 BB936_RS16925 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS16985 SM00358 Double-stranded RNA binding motif BB936_RS16985 SM00535 Ribonuclease III family BB936_RS17035 SM00487 DEAD-like helicases superfamily BB936_RS17035 SM00490 helicase superfamily c-terminal domain BB936_RS17050 SM00248 ankyrin repeats BB936_RS17070 SM00986 Uracil DNA glycosylase superfamily BB936_RS17070 SM00987 UreE urease accessory protein, C-terminal domain BB936_RS17130 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS17215 SM00988 UreE urease accessory protein, N-terminal domain BB936_RS17235 SM00382 ATPases associated with a variety of cellular activities BB936_RS17240 SM00382 ATPases associated with a variety of cellular activities BB936_RS17265 SM00450 Rhodanese Homology Domain BB936_RS17280 SM00357 Cold shock protein domain BB936_RS17305 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS17325 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS17355 SM00382 ATPases associated with a variety of cellular activities BB936_RS17375 SM00479 BB936_RS17375 BB936_RS17390 SM00849 Metallo-beta-lactamase superfamily BB936_RS17395 SM00257 Lysin motif BB936_RS17425 SM00825 Beta-ketoacyl synthase BB936_RS17470 SM00382 ATPases associated with a variety of cellular activities BB936_RS17470 SM00930 BB936_RS17470 BB936_RS17510 SM01322 BB936_RS17510 BB936_RS17530 SM00977 TilS substrate C-terminal domain BB936_RS17550 SM00481 DNA polymerase alpha chain like domain BB936_RS17580 SM00935 Outer membrane protein (OmpH-like) BB936_RS17590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BB936_RS17635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BB936_RS17680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BB936_RS17680 SM00475 5'-3' exonuclease BB936_RS17725 SM00925 MltA specific insert domain BB936_RS17745 SM00646 BB936_RS17745 BB936_RS17810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BB936_RS17825 SM00927 DNA mismatch repair enzyme MutH BB936_RS17845 SM00563 Phosphate acyltransferases BB936_RS17855 SM00354 helix_turn _helix lactose operon repressor BB936_RS17880 SM00849 Metallo-beta-lactamase superfamily BB936_RS17900 SM00862 Transcriptional regulatory protein, C terminal BB936_RS17950 SM00382 ATPases associated with a variety of cellular activities BB936_RS17970 SM00947 Carbonic anhydrase BB936_RS17980 SM00822 BB936_RS17980 BB936_RS17990 SM00271 DnaJ molecular chaperone homology domain BB936_RS17995 SM00091 PAS domain BB936_RS17995 SM00267 diguanylate cyclase BB936_RS18020 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS18030 SM00530 Helix-turn-helix XRE-family like proteins BB936_RS18055 SM00937 BB936_RS18055 BB936_RS18085 SM00387 Histidine kinase-like ATPases BB936_RS18085 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS18090 SM00448 cheY-homologous receiver domain BB936_RS18090 SM00862 Transcriptional regulatory protein, C terminal BB936_RS18125 SM00822 BB936_RS18125 BB936_RS18165 SM01011 Aminopeptidase P, N-terminal domain BB936_RS18190 SM01192 BB936_RS18190 BB936_RS18190 SM01193 BB936_RS18190 BB936_RS18205 SM00954 Region found in RelA / SpoT proteins BB936_RS18215 SM00073 Histidine Phosphotransfer domain BB936_RS18215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS18215 SM00387 Histidine kinase-like ATPases BB936_RS18215 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS18215 SM00448 cheY-homologous receiver domain BB936_RS18220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BB936_RS18225 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BB936_RS18275 SM00382 ATPases associated with a variety of cellular activities BB936_RS18285 SM00487 DEAD-like helicases superfamily BB936_RS18285 SM00490 helicase superfamily c-terminal domain BB936_RS18285 SM00847 Helicase associated domain (HA2) Add an annotation BB936_RS18345 SM00382 ATPases associated with a variety of cellular activities BB936_RS18350 SM00947 Carbonic anhydrase BB936_RS18405 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS18430 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS18430 SM00895 BB936_RS18430 BB936_RS18445 SM00644 BB936_RS18445 BB936_RS18470 SM01240 BB936_RS18470 BB936_RS18495 SM00957 SecA DEAD-like domain BB936_RS18495 SM00958 SecA preprotein cross-linking domain BB936_RS18515 SM00864 Tubulin/FtsZ family, GTPase domain BB936_RS18515 SM00865 Tubulin/FtsZ family, C-terminal domain BB936_RS18520 SM00842 Cell division protein FtsA BB936_RS18595 SM00354 helix_turn _helix lactose operon repressor BB936_RS18620 SM00917 LeuA allosteric (dimerisation) domain BB936_RS18625 SM01329 BB936_RS18625 BB936_RS18690 SM00382 ATPases associated with a variety of cellular activities BB936_RS18700 SM00486 DNA polymerase type-B family BB936_RS18705 SM00487 DEAD-like helicases superfamily BB936_RS18705 SM00490 helicase superfamily c-terminal domain BB936_RS18710 SM00634 Bacterial Ig-like domain (group 1) BB936_RS18720 SM00271 DnaJ molecular chaperone homology domain BB936_RS18740 SM00650 Ribosomal RNA adenine dimethylases BB936_RS18775 SM00851 MGS-like domain BB936_RS18775 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BB936_RS18780 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BB936_RS18810 SM00904 Riboflavin kinase BB936_RS18835 SM00271 DnaJ molecular chaperone homology domain BB936_RS18850 SM00247 Beta/gamma crystallins BB936_RS18860 SM00852 Probable molybdopterin binding domain BB936_RS18895 SM00448 cheY-homologous receiver domain BB936_RS18895 SM00862 Transcriptional regulatory protein, C terminal BB936_RS18905 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS18905 SM00871 Bacterial transcription activator, effector binding domain BB936_RS18910 SM00855 Phosphoglycerate mutase family BB936_RS18930 SM00831 Cation transporter/ATPase, N-terminus BB936_RS18940 SM00267 diguanylate cyclase BB936_RS18950 SM00382 ATPases associated with a variety of cellular activities BB936_RS18965 SM00829 Enoylreductase BB936_RS18975 SM00382 ATPases associated with a variety of cellular activities BB936_RS19000 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BB936_RS19005 SM01133 BB936_RS19005 BB936_RS19030 SM00749 bacterial OsmY and nodulation domain BB936_RS19075 SM00267 diguanylate cyclase BB936_RS19105 SM00640 Glycosyl hydrolases family 32 BB936_RS19110 SM00354 helix_turn _helix lactose operon repressor BB936_RS19115 SM00091 PAS domain BB936_RS19160 SM01120 BB936_RS19160 BB936_RS19215 SM00382 ATPases associated with a variety of cellular activities BB936_RS19235 SM01133 BB936_RS19235 BB936_RS19345 SM00382 ATPases associated with a variety of cellular activities BB936_RS19350 SM00382 ATPases associated with a variety of cellular activities BB936_RS19380 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS19380 SM00866 BB936_RS19380 BB936_RS19405 SM00382 ATPases associated with a variety of cellular activities BB936_RS19410 SM00382 ATPases associated with a variety of cellular activities BB936_RS19420 SM00072 Guanylate kinase homologues. BB936_RS19430 SM00859 Semialdehyde dehydrogenase, NAD binding domain BB936_RS19455 SM00382 ATPases associated with a variety of cellular activities BB936_RS19545 SM00487 DEAD-like helicases superfamily BB936_RS19545 SM00490 helicase superfamily c-terminal domain BB936_RS19550 SM00028 Tetratricopeptide repeats BB936_RS19555 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS19555 SM00322 K homology RNA-binding domain BB936_RS19560 SM01387 BB936_RS19560 BB936_RS19575 SM00173 Ras subfamily of RAS small GTPases BB936_RS19580 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS19580 SM00322 K homology RNA-binding domain BB936_RS19615 SM00382 ATPases associated with a variety of cellular activities BB936_RS19625 SM01103 BB936_RS19625 BB936_RS19640 SM00448 cheY-homologous receiver domain BB936_RS19640 SM00862 Transcriptional regulatory protein, C terminal BB936_RS19645 SM00387 Histidine kinase-like ATPases BB936_RS19645 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS19710 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS19710 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS19740 SM01091 Transporter associated domain BB936_RS19830 SM00967 RNA 2'-O ribose methyltransferase substrate binding BB936_RS19835 SM00316 Ribosomal protein S1-like RNA-binding domain BB936_RS19835 SM00357 Cold shock protein domain BB936_RS19835 SM00955 BB936_RS19835 BB936_RS19845 SM00788 Adenylosuccinate synthetase BB936_RS19855 SM00244 prohibitin homologues BB936_RS19860 SM00244 prohibitin homologues BB936_RS19880 SM00853 MutL C terminal dimerisation domain BB936_RS19880 SM01340 BB936_RS19880 BB936_RS19885 SM00257 Lysin motif BB936_RS19885 SM00646 BB936_RS19885 BB936_RS19915 SM00479 BB936_RS19915 BB936_RS19975 SM00841 Elongation factor P, C-terminal BB936_RS19975 SM01185 BB936_RS19975 BB936_RS20000 SM00883 Chaperonin 10 Kd subunit BB936_RS20065 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS20105 SM00382 ATPases associated with a variety of cellular activities BB936_RS20145 SM00382 ATPases associated with a variety of cellular activities BB936_RS20150 SM00965 Secretin and TonB N terminus short domain BB936_RS20215 SM00382 ATPases associated with a variety of cellular activities BB936_RS20265 SM00342 helix_turn_helix, arabinose operon control protein BB936_RS20335 SM00421 helix_turn_helix, Lux Regulon BB936_RS20335 SM00448 cheY-homologous receiver domain BB936_RS20400 SM00798 AICARFT/IMPCHase bienzyme BB936_RS20400 SM00851 MGS-like domain BB936_RS20405 SM01209 BB936_RS20405 BB936_RS20405 SM01210 BB936_RS20405 BB936_RS20415 SM00411 bacterial (prokaryotic) histone like domain BB936_RS20470 SM00876 Biotin and Thiamin Synthesis associated domain BB936_RS20480 SM00663 RNA polymerase I subunit A N-terminus BB936_RS20505 SM00649 Ribosomal protein L11/L12 BB936_RS20510 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BB936_RS20510 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BB936_RS20640 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BB936_RS20645 SM01004 Delta-aminolevulinic acid dehydratase BB936_RS20740 SM00382 ATPases associated with a variety of cellular activities BB936_RS20790 SM00382 ATPases associated with a variety of cellular activities BB936_RS20795 SM00382 ATPases associated with a variety of cellular activities BB936_RS20840 SM00382 ATPases associated with a variety of cellular activities BB936_RS20845 SM00382 ATPases associated with a variety of cellular activities BB936_RS20845 SM00962 SRP54-type protein, GTPase domain BB936_RS20845 SM00963 SRP54-type protein, helical bundle domain BB936_RS20940 SM00341 Helicase and RNase D C-terminal BB936_RS20940 SM00487 DEAD-like helicases superfamily BB936_RS20940 SM00490 helicase superfamily c-terminal domain BB936_RS20940 SM00956 BB936_RS20940 BB936_RS21010 SM01219 BB936_RS21010 BB936_RS21115 SM00984 UDP binding domain BB936_RS21140 SM00357 Cold shock protein domain BB936_RS21140 SM00382 ATPases associated with a variety of cellular activities BB936_RS21140 SM00959 Rho termination factor, N-terminal domain BB936_RS21150 SM00487 DEAD-like helicases superfamily BB936_RS21150 SM00490 helicase superfamily c-terminal domain BB936_RS21160 SM00060 Fibronectin type 3 domain BB936_RS21200 SM00072 Guanylate kinase homologues. BB936_RS21205 SM01409 BB936_RS21205 BB936_RS21210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BB936_RS21210 SM00954 Region found in RelA / SpoT proteins BB936_RS21220 SM00487 DEAD-like helicases superfamily BB936_RS21220 SM00490 helicase superfamily c-terminal domain BB936_RS21245 SM00421 helix_turn_helix, Lux Regulon BB936_RS21250 SM00421 helix_turn_helix, Lux Regulon BB936_RS21285 SM01230 BB936_RS21285 BB936_RS21295 SM00091 PAS domain BB936_RS21295 SM00387 Histidine kinase-like ATPases BB936_RS21295 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS21300 SM00382 ATPases associated with a variety of cellular activities BB936_RS21300 SM00448 cheY-homologous receiver domain BB936_RS21305 SM00729 Elongator protein 3, MiaB family, Radical SAM BB936_RS21320 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BB936_RS21320 SM00474 3'-5' exonuclease BB936_RS21320 SM00475 5'-3' exonuclease BB936_RS21320 SM00482 DNA polymerase A domain BB936_RS21380 SM00345 helix_turn_helix gluconate operon transcriptional repressor BB936_RS21380 SM00895 BB936_RS21380 BB936_RS21390 SM00354 helix_turn _helix lactose operon repressor BB936_RS21410 SM00382 ATPases associated with a variety of cellular activities BB936_RS21425 SM00382 ATPases associated with a variety of cellular activities BB936_RS21430 SM00327 von Willebrand factor (vWF) type A domain BB936_RS21445 SM00344 helix_turn_helix ASNC type BB936_RS21455 SM01228 BB936_RS21455 BB936_RS21500 SM00382 ATPases associated with a variety of cellular activities BB936_RS21535 SM00382 ATPases associated with a variety of cellular activities BB936_RS21550 SM00062 Bacterial periplasmic substrate-binding proteins BB936_RS21580 SM00421 helix_turn_helix, Lux Regulon BB936_RS21580 SM00448 cheY-homologous receiver domain BB936_RS21585 SM00387 Histidine kinase-like ATPases BB936_RS21585 SM00388 His Kinase A (phosphoacceptor) domain BB936_RS21595 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BB936_RS21595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BB936_RS21605 SM00382 ATPases associated with a variety of cellular activities BB936_RS21605 SM00930 BB936_RS21605 BB936_RS21630 SM01234 BB936_RS21630