BED35_RS00065 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BED35_RS00090 PF00230 Major intrinsic protein BED35_RS00145 PF01053 Cys/Met metabolism PLP-dependent enzyme BED35_RS00150 PF00696 Amino acid kinase family BED35_RS00160 PF00742 Homoserine dehydrogenase BED35_RS00160 PF03447 Homoserine dehydrogenase, NAD binding domain BED35_RS00445 PF00419 Fimbrial protein BED35_RS00490 PF02768 DNA polymerase III beta subunit, C-terminal domain BED35_RS00510 PF01751 Toprim domain BED35_RS00660 PF00696 Amino acid kinase family BED35_RS00690 PF00311 Phosphoenolpyruvate carboxylase BED35_RS00805 PF01609 Transposase DDE domain BED35_RS00920 PF13407 Periplasmic binding protein domain BED35_RS00935 PF00308 Bacterial dnaA protein BED35_RS00935 PF08299 Bacterial dnaA protein helix-turn-helix BED35_RS00935 PF11638 DnaA N-terminal domain BED35_RS00940 PF00712 DNA polymerase III beta subunit, N-terminal domain BED35_RS00940 PF02767 DNA polymerase III beta subunit, central domain BED35_RS00940 PF02768 DNA polymerase III beta subunit, C-terminal domain BED35_RS00945 PF02463 RecF/RecN/SMC N terminal domain BED35_RS00950 PF00204 DNA gyrase B BED35_RS00950 PF00986 DNA gyrase B subunit, carboxyl terminus BED35_RS00950 PF01751 Toprim domain BED35_RS00950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS00955 PF08282 haloacid dehalogenase-like hydrolase BED35_RS00960 PF02423 Ornithine cyclodeaminase/mu-crystallin family BED35_RS00965 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS00970 PF07676 WD40-like Beta Propeller Repeat BED35_RS00970 PF12566 BED35_RS00970 BED35_RS00975 PF07119 BED35_RS00975 BED35_RS00980 PF00011 Hsp20/alpha crystallin family BED35_RS00985 PF00011 Hsp20/alpha crystallin family BED35_RS00990 PF01548 BED35_RS00990 BED35_RS00990 PF02371 BED35_RS00990 BED35_RS01000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED35_RS01000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED35_RS01005 PF00230 Major intrinsic protein BED35_RS01015 PF06005 Protein of unknown function (DUF904) BED35_RS01020 PF03737 Demethylmenaquinone methyltransferase BED35_RS01025 PF01040 UbiA prenyltransferase family BED35_RS01030 PF00004 ATPase family associated with various cellular activities (AAA) BED35_RS01030 PF07724 AAA domain (Cdc48 subfamily) BED35_RS01030 PF10431 C-terminal, D2-small domain, of ClpB protein BED35_RS01035 PF00227 Proteasome subunit BED35_RS01040 PF05036 Sporulation related domain BED35_RS01045 PF00356 Bacterial regulatory proteins, lacI family BED35_RS01045 PF13377 Periplasmic binding protein-like domain BED35_RS01050 PF00270 DEAD/DEAH box helicase BED35_RS01050 PF00271 Helicase conserved C-terminal domain BED35_RS01055 PF01197 Ribosomal protein L31 BED35_RS01060 PF01340 Met Apo-repressor, MetJ BED35_RS01065 PF01053 Cys/Met metabolism PLP-dependent enzyme BED35_RS01070 PF00696 Amino acid kinase family BED35_RS01070 PF00742 Homoserine dehydrogenase BED35_RS01070 PF03447 Homoserine dehydrogenase, NAD binding domain BED35_RS01075 PF02219 Methylenetetrahydrofolate reductase BED35_RS01080 PF00311 Phosphoenolpyruvate carboxylase BED35_RS01085 PF01546 Peptidase family M20/M25/M40 BED35_RS01085 PF07687 Peptidase dimerisation domain BED35_RS01090 PF01118 Semialdehyde dehydrogenase, NAD binding domain BED35_RS01090 PF02774 Semialdehyde dehydrogenase, dimerisation domain BED35_RS01095 PF00696 Amino acid kinase family BED35_RS01100 PF00206 Lyase BED35_RS01100 PF14698 Argininosuccinate lyase C-terminal BED35_RS01110 PF06438 Heme-binding protein A (HasA) BED35_RS01115 PF06438 Heme-binding protein A (HasA) BED35_RS01120 PF06438 Heme-binding protein A (HasA) BED35_RS01130 PF00005 ABC transporter BED35_RS01130 PF00664 ABC transporter transmembrane region BED35_RS01135 PF13437 HlyD family secretion protein BED35_RS01135 PF13533 Biotin-lipoyl like BED35_RS01140 PF03544 Gram-negative bacterial TonB protein C-terminal BED35_RS01155 PF00462 Glutaredoxin BED35_RS01155 PF08534 Redoxin BED35_RS01160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS01160 PF03466 LysR substrate binding domain BED35_RS01165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED35_RS01165 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS01170 PF00440 Bacterial regulatory proteins, tetR family BED35_RS01175 PF07226 BED35_RS01175 BED35_RS01180 PF05958 tRNA (Uracil-5-)-methyltransferase BED35_RS01185 PF00593 TonB dependent receptor BED35_RS01185 PF07715 TonB-dependent Receptor Plug Domain BED35_RS01190 PF01177 Asp/Glu/Hydantoin racemase BED35_RS01230 PF13407 Periplasmic binding protein domain BED35_RS01235 PF00005 ABC transporter BED35_RS01240 PF02653 BED35_RS01240 BED35_RS01245 PF02653 BED35_RS01245 BED35_RS01250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS01250 PF03466 LysR substrate binding domain BED35_RS01255 PF04219 BED35_RS01255 BED35_RS01260 PF01078 Magnesium chelatase, subunit ChlI BED35_RS01260 PF13335 BED35_RS01260 BED35_RS01260 PF13541 Subunit ChlI of Mg-chelatase BED35_RS01265 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS01265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS01265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS01270 PF13710 ACT domain BED35_RS01275 PF01063 Aminotransferase class IV BED35_RS01280 PF00920 Dehydratase family BED35_RS01285 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS01285 PF00585 C-terminal regulatory domain of Threonine dehydratase BED35_RS01300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS01300 PF03466 LysR substrate binding domain BED35_RS01305 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BED35_RS01305 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain BED35_RS01315 PF01320 Colicin immunity protein / pyocin immunity protein BED35_RS01320 PF01320 Colicin immunity protein / pyocin immunity protein BED35_RS01325 PF06530 BED35_RS01325 BED35_RS01330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS01330 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS01335 PF00419 Fimbrial protein BED35_RS01340 PF13953 PapC C-terminal domain BED35_RS01345 PF00577 Outer membrane usher protein BED35_RS01345 PF13954 PapC N-terminal domain BED35_RS01350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS01350 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS01355 PF13358 DDE superfamily endonuclease BED35_RS01355 PF13384 Homeodomain-like domain BED35_RS01360 PF00480 ROK family BED35_RS01365 PF00356 Bacterial regulatory proteins, lacI family BED35_RS01365 PF13377 Periplasmic binding protein-like domain BED35_RS01370 PF13673 Acetyltransferase (GNAT) domain BED35_RS01375 PF13708 BED35_RS01375 BED35_RS01380 PF06755 BED35_RS01380 BED35_RS01390 PF00872 BED35_RS01390 BED35_RS01395 PF12146 Putative lysophospholipase BED35_RS01400 PF05860 haemagglutination activity domain BED35_RS01415 PF05860 haemagglutination activity domain BED35_RS01430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS01430 PF05231 BED35_RS01430 BED35_RS01430 PF07730 Histidine kinase BED35_RS01435 PF00072 Response regulator receiver domain BED35_RS01435 PF00196 Bacterial regulatory proteins, luxR family BED35_RS01440 PF00884 Sulfatase BED35_RS01440 PF08019 BED35_RS01440 BED35_RS01445 PF02566 OsmC-like protein BED35_RS01450 PF01548 BED35_RS01450 BED35_RS01450 PF02371 BED35_RS01450 BED35_RS01455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS01460 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS01465 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS01465 PF12911 BED35_RS01465 BED35_RS01470 PF00005 ABC transporter BED35_RS01470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED35_RS01475 PF00005 ABC transporter BED35_RS01475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED35_RS01480 PF11658 BED35_RS01480 BED35_RS01485 PF11120 BED35_RS01485 BED35_RS01490 PF10995 BED35_RS01490 BED35_RS01495 PF10945 BED35_RS01495 BED35_RS01500 PF06564 YhjQ protein BED35_RS01505 PF00535 Glycosyl transferase family 2 BED35_RS01505 PF03552 Cellulose synthase BED35_RS01505 PF07238 PilZ domain BED35_RS01510 PF03170 Bacterial cellulose synthase subunit BED35_RS01515 PF01270 Glycosyl hydrolases family 8 BED35_RS01520 PF05420 BED35_RS01520 BED35_RS01520 PF13432 Tetratricopeptide repeat BED35_RS01520 PF14559 Tetratricopeptide repeat BED35_RS01530 PF00563 EAL domain BED35_RS01530 PF00672 HAMP domain BED35_RS01530 PF17154 BED35_RS01530 BED35_RS01535 PF06178 Oligogalacturonate-specific porin protein (KdgM) BED35_RS01540 PF06917 Periplasmic pectate lyase BED35_RS01545 PF00754 F5/8 type C domain BED35_RS01550 PF00375 Sodium:dicarboxylate symporter family BED35_RS01555 PF00675 Insulinase (Peptidase family M16) BED35_RS01555 PF05193 Peptidase M16 inactive domain BED35_RS01560 PF00294 pfkB family carbohydrate kinase BED35_RS01565 PF01361 Tautomerase enzyme BED35_RS01570 PF00563 EAL domain BED35_RS01580 PF02611 CDP-diacylglycerol pyrophosphatase BED35_RS01585 PF03631 BED35_RS01585 BED35_RS01590 PF03212 Pertactin BED35_RS01590 PF03797 Autotransporter beta-domain BED35_RS01595 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED35_RS01595 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS01600 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ BED35_RS01605 PF01432 Peptidase family M3 BED35_RS01610 PF04445 Putative SAM-dependent methyltransferase BED35_RS01615 PF08548 Peptidase M10 serralysin C terminal BED35_RS01620 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BED35_RS01620 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BED35_RS01625 PF00582 Universal stress protein family BED35_RS01630 PF01548 BED35_RS01630 BED35_RS01630 PF02371 BED35_RS01630 BED35_RS01635 PF10625 BED35_RS01635 BED35_RS01640 PF01384 BED35_RS01640 BED35_RS01645 PF03486 HI0933-like protein BED35_RS01650 PF08722 TnsA endonuclease N terminal BED35_RS01660 PF13401 AAA domain BED35_RS01675 PF16473 BED35_RS01675 BED35_RS01685 PF13610 BED35_RS01685 BED35_RS01690 PF07728 AAA domain (dynein-related subfamily) BED35_RS01700 PF04607 Region found in RelA / SpoT proteins BED35_RS01710 PF00375 Sodium:dicarboxylate symporter family BED35_RS01715 PF14330 BED35_RS01715 BED35_RS01720 PF07287 BED35_RS01720 BED35_RS01725 PF05034 Methylaspartate ammonia-lyase N-terminus BED35_RS01725 PF07476 Methylaspartate ammonia-lyase C-terminus BED35_RS01730 PF06368 Methylaspartate mutase E chain (MutE) BED35_RS01745 PF00288 GHMP kinases N terminal domain BED35_RS01750 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS01755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS01755 PF03466 LysR substrate binding domain BED35_RS01760 PF05681 BED35_RS01760 BED35_RS01760 PF05683 Fumarase C-terminus BED35_RS01765 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BED35_RS01770 PF08282 haloacid dehalogenase-like hydrolase BED35_RS01780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS01780 PF03466 LysR substrate binding domain BED35_RS01785 PF07690 Major Facilitator Superfamily BED35_RS01790 PF00171 Aldehyde dehydrogenase family BED35_RS01795 PF04962 KduI/IolB family BED35_RS01800 PF01380 SIS domain BED35_RS01800 PF01418 Helix-turn-helix domain, rpiR family BED35_RS01805 PF00294 pfkB family carbohydrate kinase BED35_RS01805 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) BED35_RS01810 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS01810 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS01810 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS01815 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED35_RS01815 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BED35_RS01820 PF01261 Xylose isomerase-like TIM barrel BED35_RS01825 PF00583 Acetyltransferase (GNAT) family BED35_RS01830 PF02678 Pirin BED35_RS01835 PF00356 Bacterial regulatory proteins, lacI family BED35_RS01835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS01840 PF02447 BED35_RS01840 BED35_RS01845 PF01202 Shikimate kinase BED35_RS01850 PF01914 BED35_RS01850 BED35_RS01855 PF01118 Semialdehyde dehydrogenase, NAD binding domain BED35_RS01855 PF02774 Semialdehyde dehydrogenase, dimerisation domain BED35_RS01860 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS01860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS01860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS01865 PF03306 Alpha-acetolactate decarboxylase BED35_RS01870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS01870 PF03466 LysR substrate binding domain BED35_RS01875 PF06580 BED35_RS01875 BED35_RS01875 PF07694 5TMR of 5TMR-LYT BED35_RS01880 PF00128 Alpha amylase, catalytic domain BED35_RS01880 PF02806 Alpha amylase, C-terminal all-beta domain BED35_RS01880 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BED35_RS01885 PF00128 Alpha amylase, catalytic domain BED35_RS01885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BED35_RS01890 PF00483 Nucleotidyl transferase BED35_RS01895 PF00534 Glycosyl transferases group 1 BED35_RS01895 PF08323 Starch synthase catalytic domain BED35_RS01900 PF00343 Carbohydrate phosphorylase BED35_RS01905 PF01266 FAD dependent oxidoreductase BED35_RS01905 PF16901 BED35_RS01905 BED35_RS01915 PF01548 BED35_RS01915 BED35_RS01915 PF02371 BED35_RS01915 BED35_RS01920 PF00455 BED35_RS01920 BED35_RS01920 PF08220 DeoR-like helix-turn-helix domain BED35_RS01925 PF01694 Rhomboid family BED35_RS01925 PF12122 Protein of unknown function (DUF3582) BED35_RS01930 PF00581 Rhodanese-like domain BED35_RS01940 PF00196 Bacterial regulatory proteins, luxR family BED35_RS01945 PF00343 Carbohydrate phosphorylase BED35_RS01950 PF02446 4-alpha-glucanotransferase BED35_RS01955 PF01106 NifU-like domain BED35_RS01955 PF01521 Iron-sulphur cluster biosynthesis BED35_RS01965 PF00561 alpha/beta hydrolase fold BED35_RS01970 PF07338 Protein of unknown function (DUF1471) BED35_RS01975 PF01548 BED35_RS01975 BED35_RS01975 PF02371 BED35_RS01975 BED35_RS01980 PF09012 FeoC like transcriptional regulator BED35_RS01985 PF02421 Ferrous iron transport protein B BED35_RS01985 PF07664 BED35_RS01985 BED35_RS01985 PF07670 Nucleoside recognition BED35_RS01990 PF04023 FeoA domain BED35_RS01995 PF00575 S1 RNA binding domain BED35_RS01995 PF09371 Tex-like protein N-terminal domain BED35_RS01995 PF12836 Helix-hairpin-helix motif BED35_RS01995 PF16921 BED35_RS01995 BED35_RS02000 PF07690 Major Facilitator Superfamily BED35_RS02020 PF01272 Transcription elongation factor, GreA/GreB, C-term BED35_RS02020 PF03449 Transcription elongation factor, N-terminal BED35_RS02025 PF00072 Response regulator receiver domain BED35_RS02025 PF00486 Transcriptional regulatory protein, C terminal BED35_RS02030 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS02030 PF00672 HAMP domain BED35_RS02030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS02035 PF01293 Phosphoenolpyruvate carboxykinase BED35_RS02040 PF01430 Hsp33 protein BED35_RS02045 PF01479 S4 domain BED35_RS02050 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS02055 PF07095 Intracellular growth attenuator protein IgaA BED35_RS02060 PF00293 NUDIX domain BED35_RS02065 PF00905 Penicillin binding protein transpeptidase domain BED35_RS02065 PF00912 Transglycosylase BED35_RS02065 PF17092 BED35_RS02065 BED35_RS02070 PF11104 Type IV pilus assembly protein PilM; BED35_RS02075 PF05137 BED35_RS02075 BED35_RS02085 PF10748 BED35_RS02085 BED35_RS02090 PF00263 BED35_RS02090 BED35_RS02090 PF03958 Bacterial type II/III secretion system short domain BED35_RS02095 PF01202 Shikimate kinase BED35_RS02100 PF01761 3-dehydroquinate synthase BED35_RS02105 PF05036 Sporulation related domain BED35_RS02110 PF02086 D12 class N6 adenine-specific DNA methyltransferase BED35_RS02115 PF00834 Ribulose-phosphate 3 epimerase family BED35_RS02125 PF00579 tRNA synthetases class I (W and Y) BED35_RS02130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS02130 PF10414 Sirohaem synthase dimerisation region BED35_RS02130 PF13241 Putative NAD(P)-binding BED35_RS02130 PF14824 Sirohaem biosynthesis protein central BED35_RS02140 PF13806 Rieske-like [2Fe-2S] domain BED35_RS02145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BED35_RS02145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BED35_RS02145 PF04324 BFD-like [2Fe-2S] binding domain BED35_RS02145 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS02150 PF07969 Amidohydrolase family BED35_RS02155 PF07690 Major Facilitator Superfamily BED35_RS02160 PF00356 Bacterial regulatory proteins, lacI family BED35_RS02160 PF13377 Periplasmic binding protein-like domain BED35_RS02165 PF02056 Family 4 glycosyl hydrolase BED35_RS02165 PF11975 Family 4 glycosyl hydrolase C-terminal domain BED35_RS02170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BED35_RS02175 PF05872 BED35_RS02175 BED35_RS02180 PF00117 Glutamine amidotransferase class-I BED35_RS02185 PF00202 Aminotransferase class-III BED35_RS02195 PF00027 Cyclic nucleotide-binding domain BED35_RS02195 PF00325 Bacterial regulatory proteins, crp family BED35_RS02200 PF02566 OsmC-like protein BED35_RS02205 PF00485 Phosphoribulokinase / Uridine kinase family BED35_RS02210 PF06794 Uncharacterised protein family (UPF0270) BED35_RS02215 PF00561 alpha/beta hydrolase fold BED35_RS02220 PF01810 BED35_RS02220 BED35_RS02225 PF02567 Phenazine biosynthesis-like protein BED35_RS02230 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BED35_RS02240 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS02245 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BED35_RS02250 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED35_RS02255 PF00535 Glycosyl transferase family 2 BED35_RS02260 PF00005 ABC transporter BED35_RS02260 PF12848 ABC transporter BED35_RS02265 PF02525 Flavodoxin-like fold BED35_RS02270 PF00999 Sodium/hydrogen exchanger family BED35_RS02270 PF02254 TrkA-N domain BED35_RS02275 PF09526 BED35_RS02275 BED35_RS02280 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED35_RS02285 PF04102 SlyX BED35_RS02290 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED35_RS02290 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BED35_RS02295 PF08348 BED35_RS02295 BED35_RS02295 PF13309 BED35_RS02295 BED35_RS02300 PF02635 DsrE/DsrF-like family BED35_RS02305 PF02635 DsrE/DsrF-like family BED35_RS02310 PF04077 DsrH like protein BED35_RS02315 PF00164 Ribosomal protein S12/S23 BED35_RS02320 PF00177 Ribosomal protein S7p/S5e BED35_RS02325 PF00009 Elongation factor Tu GTP binding domain BED35_RS02325 PF00679 Elongation factor G C-terminus BED35_RS02325 PF03144 Elongation factor Tu domain 2 BED35_RS02325 PF03764 Elongation factor G, domain IV BED35_RS02325 PF14492 Elongation Factor G, domain II BED35_RS02330 PF00009 Elongation factor Tu GTP binding domain BED35_RS02330 PF03143 Elongation factor Tu C-terminal domain BED35_RS02330 PF03144 Elongation factor Tu domain 2 BED35_RS02335 PF04324 BFD-like [2Fe-2S] binding domain BED35_RS02340 PF00210 Ferritin-like domain BED35_RS02345 PF00338 Ribosomal protein S10p/S20e BED35_RS02350 PF00297 Ribosomal protein L3 BED35_RS02355 PF00573 Ribosomal protein L4/L1 family BED35_RS02360 PF00276 Ribosomal protein L23 BED35_RS02365 PF00181 Ribosomal Proteins L2, RNA binding domain BED35_RS02365 PF03947 Ribosomal Proteins L2, C-terminal domain BED35_RS02370 PF00203 Ribosomal protein S19 BED35_RS02375 PF00237 Ribosomal protein L22p/L17e BED35_RS02380 PF00189 Ribosomal protein S3, C-terminal domain BED35_RS02380 PF07650 KH domain BED35_RS02385 PF00252 Ribosomal protein L16p/L10e BED35_RS02390 PF00831 Ribosomal L29 protein BED35_RS02395 PF00366 Ribosomal protein S17 BED35_RS02400 PF00238 Ribosomal protein L14p/L23e BED35_RS02405 PF00467 KOW motif BED35_RS02405 PF17136 BED35_RS02405 BED35_RS02410 PF00281 Ribosomal protein L5 BED35_RS02410 PF00673 ribosomal L5P family C-terminus BED35_RS02415 PF00253 Ribosomal protein S14p/S29e BED35_RS02420 PF00410 Ribosomal protein S8 BED35_RS02425 PF00347 Ribosomal protein L6 BED35_RS02430 PF00861 Ribosomal L18p/L5e family BED35_RS02435 PF00333 Ribosomal protein S5, N-terminal domain BED35_RS02435 PF03719 Ribosomal protein S5, C-terminal domain BED35_RS02440 PF00327 Ribosomal protein L30p/L7e BED35_RS02445 PF00828 Ribosomal protein L18e/L15 BED35_RS02450 PF00344 SecY translocase BED35_RS02455 PF00444 Ribosomal protein L36 BED35_RS02460 PF00416 Ribosomal protein S13/S18 BED35_RS02465 PF00411 Ribosomal protein S11 BED35_RS02470 PF00163 Ribosomal protein S4/S9 N-terminal domain BED35_RS02470 PF01479 S4 domain BED35_RS02475 PF01000 RNA polymerase Rpb3/RpoA insert domain BED35_RS02475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BED35_RS02475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BED35_RS02480 PF01196 Ribosomal protein L17 BED35_RS02485 PF09350 BED35_RS02485 BED35_RS02490 PF13411 MerR HTH family regulatory protein BED35_RS02495 PF03889 BED35_RS02495 BED35_RS02500 PF05598 BED35_RS02500 BED35_RS02500 PF13751 BED35_RS02500 BED35_RS02505 PF01741 Large-conductance mechanosensitive channel, MscL BED35_RS02510 PF02080 TrkA-C domain BED35_RS02510 PF02254 TrkA-N domain BED35_RS02515 PF01029 NusB family BED35_RS02515 PF01189 NOL1/NOP2/sun family BED35_RS02520 PF00551 Formyl transferase BED35_RS02520 PF02911 Formyl transferase, C-terminal domain BED35_RS02525 PF01327 Polypeptide deformylase BED35_RS02530 PF02481 DNA recombination-mediator protein A BED35_RS02535 PF04361 BED35_RS02535 BED35_RS02540 PF01396 BED35_RS02540 BED35_RS02545 PF01300 Telomere recombination BED35_RS02550 PF01488 Shikimate / quinate 5-dehydrogenase BED35_RS02550 PF08501 Shikimate dehydrogenase substrate binding domain BED35_RS02555 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS02590 PF04204 Homoserine O-succinyltransferase BED35_RS02595 PF01274 Malate synthase BED35_RS02600 PF00463 Isocitrate lyase family BED35_RS02605 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BED35_RS02610 PF01614 Bacterial transcriptional regulator BED35_RS02610 PF09339 IclR helix-turn-helix domain BED35_RS02615 PF00809 Pterin binding enzyme BED35_RS02615 PF02310 B12 binding domain BED35_RS02615 PF02574 Homocysteine S-methyltransferase BED35_RS02615 PF02607 B12 binding domain BED35_RS02615 PF02965 Vitamin B12 dependent methionine synthase, activation domain BED35_RS02620 PF05860 haemagglutination activity domain BED35_RS02620 PF13332 BED35_RS02620 BED35_RS02625 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BED35_RS02625 PF08479 POTRA domain, ShlB-type BED35_RS02635 PF00696 Amino acid kinase family BED35_RS02640 PF00342 Phosphoglucose isomerase BED35_RS02645 PF06146 BED35_RS02645 BED35_RS02650 PF01548 BED35_RS02650 BED35_RS02650 PF02371 BED35_RS02650 BED35_RS02655 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS02665 PF13416 Bacterial extracellular solute-binding protein BED35_RS02670 PF00005 ABC transporter BED35_RS02670 PF08402 TOBE domain BED35_RS02675 PF02264 LamB porin BED35_RS02680 PF07148 BED35_RS02680 BED35_RS02690 PF04345 Chorismate lyase BED35_RS02695 PF01040 UbiA prenyltransferase family BED35_RS02700 PF01553 Acyltransferase BED35_RS02705 PF01219 Prokaryotic diacylglycerol kinase BED35_RS02710 PF00717 Peptidase S24-like BED35_RS02710 PF01726 LexA DNA binding domain BED35_RS02715 PF05532 CsbD-like BED35_RS02720 PF01475 Ferric uptake regulator family BED35_RS02725 PF01757 BED35_RS02725 BED35_RS02730 PF01207 Dihydrouridine synthase (Dus) BED35_RS02735 PF09583 BED35_RS02735 BED35_RS02745 PF00107 Zinc-binding dehydrogenase BED35_RS02745 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS02750 PF00772 DnaB-like helicase N terminal domain BED35_RS02750 PF03796 DnaB-like helicase C terminal domain BED35_RS02760 PF00155 Aminotransferase class I and II BED35_RS02765 PF04237 YjbR BED35_RS02775 PF00436 Single-strand binding protein family BED35_RS02780 PF07804 HipA-like C-terminal domain BED35_RS02780 PF07805 HipA-like N-terminal domain BED35_RS02780 PF13657 HipA N-terminal domain BED35_RS02785 PF01381 Helix-turn-helix BED35_RS02790 PF00043 Glutathione S-transferase, C-terminal domain BED35_RS02790 PF02798 Glutathione S-transferase, N-terminal domain BED35_RS02795 PF00860 Permease family BED35_RS02800 PF00999 Sodium/hydrogen exchanger family BED35_RS02805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS02805 PF03466 LysR substrate binding domain BED35_RS02810 PF03788 BED35_RS02810 BED35_RS02820 PF00005 ABC transporter BED35_RS02825 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS02835 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS02840 PF10142 PhoPQ-activated pathogenicity-related protein BED35_RS02845 PF01548 BED35_RS02845 BED35_RS02845 PF02371 BED35_RS02845 BED35_RS02850 PF03279 BED35_RS02850 BED35_RS02855 PF00939 Sodium:sulfate symporter transmembrane region BED35_RS02860 PF00313 'Cold-shock' DNA-binding domain BED35_RS02865 PF00313 'Cold-shock' DNA-binding domain BED35_RS02870 PF05433 BED35_RS02870 BED35_RS02880 PF02954 Bacterial regulatory protein, Fis family BED35_RS02885 PF01207 Dihydrouridine synthase (Dus) BED35_RS02890 PF06325 Ribosomal protein L11 methyltransferase (PrmA) BED35_RS02895 PF00474 Sodium:solute symporter family BED35_RS02900 PF06196 BED35_RS02900 BED35_RS02905 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain BED35_RS02905 PF02785 Biotin carboxylase C-terminal domain BED35_RS02905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BED35_RS02910 PF00364 Biotin-requiring enzyme BED35_RS02915 PF01220 Dehydroquinase class II BED35_RS02920 PF01794 BED35_RS02920 BED35_RS02925 PF00174 Oxidoreductase molybdopterin binding domain BED35_RS02930 PF00107 Zinc-binding dehydrogenase BED35_RS02930 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS02935 PF00563 EAL domain BED35_RS02935 PF00990 GGDEF domain BED35_RS02935 PF17157 BED35_RS02935 BED35_RS02940 PF06723 MreB/Mbl protein BED35_RS02945 PF04085 rod shape-determining protein MreC BED35_RS02950 PF04093 BED35_RS02950 BED35_RS02955 PF02545 Maf-like protein BED35_RS02960 PF00575 S1 RNA binding domain BED35_RS02960 PF10150 Ribonuclease E/G family BED35_RS02965 PF13116 BED35_RS02965 BED35_RS02965 PF13502 BED35_RS02965 BED35_RS02970 PF00795 Carbon-nitrogen hydrolase BED35_RS02975 PF01523 Putative modulator of DNA gyrase BED35_RS02980 PF07804 HipA-like C-terminal domain BED35_RS02980 PF07805 HipA-like N-terminal domain BED35_RS02980 PF13657 HipA N-terminal domain BED35_RS02985 PF01381 Helix-turn-helix BED35_RS02995 PF10828 BED35_RS02995 BED35_RS03000 PF13539 D-alanyl-D-alanine carboxypeptidase BED35_RS03005 PF16083 BED35_RS03005 BED35_RS03010 PF03534 Salmonella virulence plasmid 65kDa B protein BED35_RS03010 PF12255 Insecticide toxin TcdB middle/C-terminal region BED35_RS03010 PF12256 Insecticide toxin TcdB middle/N-terminal region BED35_RS03020 PF03538 Salmonella virulence plasmid 28 BED35_RS03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS03030 PF03466 LysR substrate binding domain BED35_RS03035 PF07869 BED35_RS03035 BED35_RS03040 PF13437 HlyD family secretion protein BED35_RS03040 PF13533 Biotin-lipoyl like BED35_RS03045 PF04632 BED35_RS03045 BED35_RS03050 PF00171 Aldehyde dehydrogenase family BED35_RS03055 PF00545 ribonuclease BED35_RS03060 PF01337 Barstar (barnase inhibitor) BED35_RS03065 PF04751 Protein of unknown function (DUF615) BED35_RS03070 PF00589 Phage integrase family BED35_RS03100 PF02086 D12 class N6 adenine-specific DNA methyltransferase BED35_RS03105 PF01507 Phosphoadenosine phosphosulfate reductase family BED35_RS03110 PF05840 BED35_RS03110 BED35_RS03115 PF04606 BED35_RS03115 BED35_RS03125 PF03237 Terminase-like family BED35_RS03125 PF06056 Putative ATPase subunit of terminase (gpP-like) BED35_RS03130 PF05929 BED35_RS03130 BED35_RS03135 PF05125 BED35_RS03135 BED35_RS03140 PF05944 BED35_RS03140 BED35_RS03145 PF05926 BED35_RS03145 BED35_RS03150 PF06891 BED35_RS03150 BED35_RS03155 PF05069 BED35_RS03155 BED35_RS03160 PF10758 BED35_RS03160 BED35_RS03165 PF10772 BED35_RS03165 BED35_RS03170 PF04550 BED35_RS03170 BED35_RS03175 PF13539 D-alanyl-D-alanine carboxypeptidase BED35_RS03185 PF10963 BED35_RS03185 BED35_RS03190 PF10145 BED35_RS03190 BED35_RS03195 PF10761 BED35_RS03195 BED35_RS03200 PF04865 BED35_RS03200 BED35_RS03210 PF03406 BED35_RS03210 BED35_RS03210 PF12571 BED35_RS03210 BED35_RS03215 PF02413 BED35_RS03215 BED35_RS03240 PF14355 BED35_RS03240 BED35_RS03245 PF01523 Putative modulator of DNA gyrase BED35_RS03250 PF01548 BED35_RS03250 BED35_RS03250 PF02371 BED35_RS03250 BED35_RS03255 PF07361 Cytochrome b562 BED35_RS03260 PF01272 Transcription elongation factor, GreA/GreB, C-term BED35_RS03260 PF14760 Rnk N-terminus BED35_RS03270 PF14272 BED35_RS03270 BED35_RS03275 PF14189 BED35_RS03275 BED35_RS03280 PF14188 BED35_RS03280 BED35_RS03285 PF14187 BED35_RS03285 BED35_RS03290 PF01979 Amidohydrolase family BED35_RS03295 PF03841 L-seryl-tRNA selenium transferase BED35_RS03300 PF07071 Protein of unknown function (DUF1341) BED35_RS03310 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED35_RS03310 PF00874 PRD domain BED35_RS03310 PF05043 Mga helix-turn-helix domain BED35_RS03310 PF08279 HTH domain BED35_RS03315 PF01381 Helix-turn-helix BED35_RS03320 PF05015 Plasmid maintenance system killer protein BED35_RS03330 PF00356 Bacterial regulatory proteins, lacI family BED35_RS03330 PF13377 Periplasmic binding protein-like domain BED35_RS03340 PF00128 Alpha amylase, catalytic domain BED35_RS03340 PF11941 Domain of unknown function (DUF3459) BED35_RS03345 PF00227 Proteasome subunit BED35_RS03350 PF01841 Transglutaminase-like superfamily BED35_RS03350 PF08379 BED35_RS03350 BED35_RS03355 PF04168 BED35_RS03355 BED35_RS03360 PF14403 BED35_RS03360 BED35_RS03365 PF01042 Endoribonuclease L-PSP BED35_RS03370 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BED35_RS03370 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BED35_RS03375 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BED35_RS03375 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BED35_RS03380 PF00381 PTS HPr component phosphorylation site BED35_RS03385 PF03668 BED35_RS03385 BED35_RS03390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED35_RS03395 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BED35_RS03400 PF00309 BED35_RS03400 BED35_RS03400 PF04552 Sigma-54, DNA binding domain BED35_RS03400 PF04963 Sigma-54 factor, core binding domain BED35_RS03405 PF00005 ABC transporter BED35_RS03405 PF12399 Branched-chain amino acid ATP-binding cassette transporter BED35_RS03410 PF03968 OstA-like protein BED35_RS03415 PF06835 Lipopolysaccharide-assembly, LptC-related BED35_RS03420 PF08282 haloacid dehalogenase-like hydrolase BED35_RS03425 PF00571 CBS domain BED35_RS03425 PF01380 SIS domain BED35_RS03435 PF00005 ABC transporter BED35_RS03440 PF02405 BED35_RS03440 BED35_RS03445 PF02470 BED35_RS03445 BED35_RS03450 PF05494 Toluene tolerance, Ttg2 BED35_RS03455 PF13466 STAS domain BED35_RS03460 PF01722 BolA-like protein BED35_RS03465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BED35_RS03470 PF13180 PDZ domain BED35_RS03470 PF13365 Trypsin-like peptidase domain BED35_RS03475 PF00595 PDZ domain (Also known as DHR or GLGF) BED35_RS03475 PF13180 PDZ domain BED35_RS03475 PF13365 Trypsin-like peptidase domain BED35_RS03480 PF06295 BED35_RS03480 BED35_RS03485 PF03969 AFG1-like ATPase BED35_RS03490 PF00572 Ribosomal protein L13 BED35_RS03495 PF00380 Ribosomal protein S9/S16 BED35_RS03500 PF00043 Glutathione S-transferase, C-terminal domain BED35_RS03500 PF02798 Glutathione S-transferase, N-terminal domain BED35_RS03505 PF04386 Stringent starvation protein B BED35_RS03520 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS03520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BED35_RS03525 PF00310 Glutamine amidotransferases class-II BED35_RS03525 PF01493 GXGXG motif BED35_RS03525 PF01645 Conserved region in glutamate synthase BED35_RS03525 PF04898 Glutamate synthase central domain BED35_RS03530 PF04055 Radical SAM superfamily BED35_RS03530 PF16199 BED35_RS03530 BED35_RS03535 PF00072 Response regulator receiver domain BED35_RS03535 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS03535 PF00989 PAS fold BED35_RS03535 PF01627 Hpt domain BED35_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS03545 PF00912 Transglycosylase BED35_RS03550 PF04972 BON domain BED35_RS03555 PF13580 SIS domain BED35_RS03560 PF02021 Uncharacterised protein family UPF0102 BED35_RS03565 PF04348 LppC putative lipoprotein BED35_RS03570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS03590 PF00239 Resolvase, N terminal domain BED35_RS03600 PF00145 C-5 cytosine-specific DNA methylase BED35_RS03610 PF01381 Helix-turn-helix BED35_RS03620 PF16970 BED35_RS03620 BED35_RS03625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS03625 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS03630 PF00577 Outer membrane usher protein BED35_RS03630 PF13953 PapC C-terminal domain BED35_RS03630 PF13954 PapC N-terminal domain BED35_RS03640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS03640 PF03466 LysR substrate binding domain BED35_RS03645 PF00248 Aldo/keto reductase family BED35_RS03650 PF00107 Zinc-binding dehydrogenase BED35_RS03650 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS03655 PF02678 Pirin BED35_RS03660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS03660 PF03466 LysR substrate binding domain BED35_RS03665 PF13409 Glutathione S-transferase, N-terminal domain BED35_RS03665 PF13410 Glutathione S-transferase, C-terminal domain BED35_RS03670 PF07681 BED35_RS03670 BED35_RS03675 PF13997 BED35_RS03675 BED35_RS03680 PF07332 BED35_RS03680 BED35_RS03685 PF05957 BED35_RS03685 BED35_RS03690 PF06476 BED35_RS03690 BED35_RS03695 PF13721 SecD export protein N-terminal TM region BED35_RS03700 PF09335 BED35_RS03700 BED35_RS03710 PF00392 Bacterial regulatory proteins, gntR family BED35_RS03710 PF07729 FCD domain BED35_RS03715 PF07690 Major Facilitator Superfamily BED35_RS03720 PF02614 Glucuronate isomerase BED35_RS03725 PF01232 Mannitol dehydrogenase Rossmann domain BED35_RS03725 PF08125 Mannitol dehydrogenase C-terminal domain BED35_RS03730 PF04295 BED35_RS03730 BED35_RS03730 PF08666 SAF domain BED35_RS03735 PF10688 BED35_RS03735 BED35_RS03740 PF00375 Sodium:dicarboxylate symporter family BED35_RS03745 PF03741 BED35_RS03745 BED35_RS03755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED35_RS03760 PF01863 Protein of unknown function DUF45 BED35_RS03765 PF03797 Autotransporter beta-domain BED35_RS03775 PF03797 Autotransporter beta-domain BED35_RS03780 PF05175 Methyltransferase small domain BED35_RS03785 PF01548 BED35_RS03785 BED35_RS03785 PF02371 BED35_RS03785 BED35_RS03790 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BED35_RS03790 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS03795 PF00892 EamA-like transporter family BED35_RS03800 PF03729 BED35_RS03800 BED35_RS03810 PF00282 Pyridoxal-dependent decarboxylase conserved domain BED35_RS03815 PF13520 Amino acid permease BED35_RS03820 PF04960 Glutaminase BED35_RS03825 PF02378 Phosphotransferase system, EIIC BED35_RS03830 PF00872 BED35_RS03830 BED35_RS03835 PF00367 phosphotransferase system, EIIB BED35_RS03840 PF13580 SIS domain BED35_RS03845 PF01380 SIS domain BED35_RS03845 PF01418 Helix-turn-helix domain, rpiR family BED35_RS03850 PF00933 Glycosyl hydrolase family 3 N terminal domain BED35_RS03860 PF07075 Protein of unknown function (DUF1343) BED35_RS03870 PF01548 BED35_RS03870 BED35_RS03870 PF02371 BED35_RS03870 BED35_RS03875 PF00140 Sigma-70 factor, region 1 BED35_RS03875 PF03979 Sigma-70 factor, region 1 BED35_RS03875 PF04539 Sigma-70 region 3 BED35_RS03875 PF04542 Sigma-70 region 2 BED35_RS03875 PF04545 Sigma-70, region 4 BED35_RS03875 PF04546 Sigma-70, non-essential region BED35_RS03880 PF01807 CHC2 zinc finger BED35_RS03880 PF08275 DNA primase catalytic core, N-terminal domain BED35_RS03880 PF08278 DNA primase DnaG DnaB-binding BED35_RS03880 PF10410 DnaB-helicase binding domain of primase BED35_RS03880 PF13155 Toprim-like BED35_RS03885 PF01165 Ribosomal protein S21 BED35_RS03890 PF00814 Glycoprotease family BED35_RS03895 PF02660 BED35_RS03895 BED35_RS03900 PF02152 Dihydroneopterin aldolase BED35_RS03905 PF02673 BED35_RS03905 BED35_RS03910 PF01743 Poly A polymerase head domain BED35_RS03910 PF01966 HD domain BED35_RS03910 PF12627 Probable RNA and SrmB- binding site of polymerase A BED35_RS03915 PF08239 Bacterial SH3 domain BED35_RS03920 PF01928 CYTH domain BED35_RS03925 PF03710 Glutamate-ammonia ligase adenylyltransferase BED35_RS03925 PF08335 GlnD PII-uridylyltransferase BED35_RS03930 PF00294 pfkB family carbohydrate kinase BED35_RS03930 PF01467 Cytidylyltransferase BED35_RS03935 PF13520 Amino acid permease BED35_RS03940 PF04380 BED35_RS03940 BED35_RS03945 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BED35_RS03950 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BED35_RS03955 PF03738 Glutathionylspermidine synthase preATP-grasp BED35_RS03960 PF06693 BED35_RS03960 BED35_RS03970 PF02321 Outer membrane efflux protein BED35_RS03975 PF00293 NUDIX domain BED35_RS03980 PF06853 BED35_RS03980 BED35_RS03985 PF00149 Calcineurin-like phosphoesterase BED35_RS03990 PF05728 Uncharacterised protein family (UPF0227) BED35_RS03995 PF00204 DNA gyrase B BED35_RS03995 PF00986 DNA gyrase B subunit, carboxyl terminus BED35_RS03995 PF01751 Toprim domain BED35_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS04000 PF03466 LysR substrate binding domain BED35_RS04005 PF03992 Antibiotic biosynthesis monooxygenase BED35_RS04010 PF02525 Flavodoxin-like fold BED35_RS04015 PF00521 DNA gyrase/topoisomerase IV, subunit A BED35_RS04015 PF03989 DNA gyrase C-terminal domain, beta-propeller BED35_RS04020 PF01553 Acyltransferase BED35_RS04025 PF00394 Multicopper oxidase BED35_RS04025 PF07731 Multicopper oxidase BED35_RS04025 PF07732 Multicopper oxidase BED35_RS04030 PF04055 Radical SAM superfamily BED35_RS04030 PF08497 BED35_RS04030 BED35_RS04030 PF11842 BED35_RS04030 BED35_RS04035 PF00248 Aldo/keto reductase family BED35_RS04040 PF00465 Iron-containing alcohol dehydrogenase BED35_RS04045 PF06719 BED35_RS04045 BED35_RS04045 PF12833 Helix-turn-helix domain BED35_RS04050 PF09335 BED35_RS04050 BED35_RS04055 PF01053 Cys/Met metabolism PLP-dependent enzyme BED35_RS04060 PF01618 BED35_RS04060 BED35_RS04065 PF02472 Biopolymer transport protein ExbD/TolR BED35_RS04070 PF00092 von Willebrand factor type A domain BED35_RS04075 PF16964 BED35_RS04075 BED35_RS04080 PF07811 BED35_RS04080 BED35_RS04090 PF00482 Type II secretion system (T2SS), protein F BED35_RS04095 PF00482 Type II secretion system (T2SS), protein F BED35_RS04100 PF00437 Type II/IV secretion system protein BED35_RS04115 PF00263 BED35_RS04115 BED35_RS04115 PF13629 BED35_RS04115 BED35_RS04125 PF01478 Type IV leader peptidase family BED35_RS04135 PF00486 Transcriptional regulatory protein, C terminal BED35_RS04140 PF13532 2OG-Fe(II) oxygenase superfamily BED35_RS04145 PF00873 AcrB/AcrD/AcrF family BED35_RS04150 PF13683 BED35_RS04150 BED35_RS04170 PF12833 Helix-turn-helix domain BED35_RS04175 PF01527 Transposase BED35_RS04185 PF02321 Outer membrane efflux protein BED35_RS04195 PF00005 ABC transporter BED35_RS04210 PF00665 Integrase core domain BED35_RS04215 PF01527 Transposase BED35_RS04225 PF00756 Putative esterase BED35_RS04225 PF11806 Domain of unknown function (DUF3327) BED35_RS04230 PF00005 ABC transporter BED35_RS04235 PF01032 FecCD transport family BED35_RS04240 PF01032 FecCD transport family BED35_RS04245 PF01497 Periplasmic binding protein BED35_RS04255 PF01370 NAD dependent epimerase/dehydratase family BED35_RS04260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS04260 PF02203 Tar ligand binding domain homologue BED35_RS04270 PF00771 FHIPEP family BED35_RS04275 PF01312 FlhB HrpN YscU SpaS Family BED35_RS04280 PF01311 BED35_RS04280 BED35_RS04285 PF01313 BED35_RS04285 BED35_RS04290 PF00813 BED35_RS04290 BED35_RS04295 PF01052 Surface presentation of antigens (SPOA) BED35_RS04300 PF01052 Surface presentation of antigens (SPOA) BED35_RS04305 PF00158 Sigma-54 interaction domain BED35_RS04305 PF02954 Bacterial regulatory protein, Fis family BED35_RS04310 PF02049 BED35_RS04310 BED35_RS04320 PF01706 FliG C-terminal domain BED35_RS04320 PF14841 FliG middle domain BED35_RS04320 PF14842 FliG N-terminal domain BED35_RS04325 PF02108 BED35_RS04325 BED35_RS04325 PF09811 BED35_RS04325 BED35_RS04330 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED35_RS04335 PF02050 Flagellar FliJ protein BED35_RS04340 PF05130 FlgN protein BED35_RS04345 PF04316 Anti-sigma-28 factor, FlgM BED35_RS04350 PF13144 SAF-like BED35_RS04355 PF00460 Flagella basal body rod protein BED35_RS04360 PF00460 Flagella basal body rod protein BED35_RS04360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS04365 PF03963 BED35_RS04365 BED35_RS04365 PF13860 FlgD Ig-like domain BED35_RS04365 PF13861 FlgD Tudor-like domain BED35_RS04370 PF00460 Flagella basal body rod protein BED35_RS04370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS04370 PF07559 Flagellar basal body protein FlaE BED35_RS04375 PF00460 Flagella basal body rod protein BED35_RS04375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS04380 PF00460 Flagella basal body rod protein BED35_RS04380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS04385 PF02107 BED35_RS04385 BED35_RS04390 PF02119 BED35_RS04390 BED35_RS04395 PF10135 BED35_RS04395 BED35_RS04400 PF00460 Flagella basal body rod protein BED35_RS04400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS04405 PF00669 Bacterial flagellin N-terminal helical region BED35_RS04405 PF00700 Bacterial flagellin C-terminal helical region BED35_RS04425 PF00669 Bacterial flagellin N-terminal helical region BED35_RS04425 PF00700 Bacterial flagellin C-terminal helical region BED35_RS04430 PF02465 BED35_RS04430 BED35_RS04430 PF07195 BED35_RS04430 BED35_RS04430 PF07196 Flagellin hook IN motif BED35_RS04435 PF02561 Flagellar protein FliS BED35_RS04450 PF03748 BED35_RS04450 BED35_RS04455 PF04539 Sigma-70 region 3 BED35_RS04455 PF04542 Sigma-70 region 2 BED35_RS04455 PF04545 Sigma-70, region 4 BED35_RS04460 PF01618 BED35_RS04460 BED35_RS04465 PF00691 OmpA family BED35_RS04465 PF13677 BED35_RS04465 BED35_RS04470 PF05433 BED35_RS04470 BED35_RS04475 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BED35_RS04475 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BED35_RS04480 PF13247 4Fe-4S dicluster domain BED35_RS04490 PF00374 Nickel-dependent hydrogenase BED35_RS04495 PF01750 Hydrogenase maturation protease BED35_RS04500 PF11939 Protein of unknown function (DUF3457) BED35_RS04505 PF01155 Hydrogenase expression/synthesis hypA family BED35_RS04510 PF02492 CobW/HypB/UreG, nucleotide-binding domain BED35_RS04515 PF01455 HupF/HypC family BED35_RS04520 PF01924 Hydrogenase formation hypA family BED35_RS04525 PF00586 AIR synthase related protein, N-terminal domain BED35_RS04525 PF02769 AIR synthase related protein, C-terminal domain BED35_RS04530 PF00708 Acylphosphatase BED35_RS04530 PF01300 Telomere recombination BED35_RS04530 PF07503 HypF finger BED35_RS04535 PF02661 Fic/DOC family BED35_RS04535 PF08279 HTH domain BED35_RS04540 PF02110 Hydroxyethylthiazole kinase family BED35_RS04550 PF11769 BED35_RS04550 BED35_RS04555 PF00563 EAL domain BED35_RS04555 PF00989 PAS fold BED35_RS04555 PF00990 GGDEF domain BED35_RS04555 PF05228 BED35_RS04555 BED35_RS04560 PF16576 BED35_RS04560 BED35_RS04575 PF00083 Sugar (and other) transporter BED35_RS04575 PF08946 Osmosensory transporter coiled coil BED35_RS04585 PF00857 Isochorismatase family BED35_RS04590 PF01895 PhoU domain BED35_RS04590 PF02690 BED35_RS04590 BED35_RS04595 PF01156 Inosine-uridine preferring nucleoside hydrolase BED35_RS04600 PF00356 Bacterial regulatory proteins, lacI family BED35_RS04600 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS04605 PF01548 BED35_RS04605 BED35_RS04605 PF02371 BED35_RS04605 BED35_RS04610 PF00083 Sugar (and other) transporter BED35_RS04620 PF00155 Aminotransferase class I and II BED35_RS04620 PF00392 Bacterial regulatory proteins, gntR family BED35_RS04630 PF00891 O-methyltransferase BED35_RS04635 PF00891 O-methyltransferase BED35_RS04640 PF01497 Periplasmic binding protein BED35_RS04645 PF01032 FecCD transport family BED35_RS04650 PF01032 FecCD transport family BED35_RS04655 PF00005 ABC transporter BED35_RS04660 PF00557 Metallopeptidase family M24 BED35_RS04665 PF11903 BED35_RS04665 BED35_RS04675 PF17090 BED35_RS04675 BED35_RS04680 PF13437 HlyD family secretion protein BED35_RS04680 PF13533 Biotin-lipoyl like BED35_RS04685 PF04632 BED35_RS04685 BED35_RS04695 PF01276 Orn/Lys/Arg decarboxylase, major domain BED35_RS04695 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED35_RS04695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED35_RS04700 PF13520 Amino acid permease BED35_RS04710 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BED35_RS04715 PF03400 BED35_RS04715 BED35_RS04720 PF03811 BED35_RS04720 BED35_RS04720 PF12759 BED35_RS04720 BED35_RS04725 PF07514 Putative helicase BED35_RS04725 PF07515 Protein of unknown function (DUF1528) BED35_RS04740 PF00589 Phage integrase family BED35_RS04755 PF01276 Orn/Lys/Arg decarboxylase, major domain BED35_RS04755 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED35_RS04755 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED35_RS04760 PF01925 BED35_RS04760 BED35_RS04765 PF01464 Transglycosylase SLT domain BED35_RS04765 PF11873 Domain of unknown function (DUF3393) BED35_RS04770 PF04362 Bacterial Fe(2+) trafficking BED35_RS04775 PF00633 Helix-hairpin-helix motif BED35_RS04775 PF00730 HhH-GPD superfamily base excision DNA repair protein BED35_RS04775 PF10576 Iron-sulfur binding domain of endonuclease III BED35_RS04775 PF14815 NUDIX domain BED35_RS04780 PF02390 Putative methyltransferase BED35_RS04785 PF04320 BED35_RS04785 BED35_RS04790 PF04960 Glutaminase BED35_RS04795 PF11101 BED35_RS04795 BED35_RS04800 PF04055 Radical SAM superfamily BED35_RS04800 PF06969 HemN C-terminal domain BED35_RS04805 PF01725 Ham1 family BED35_RS04810 PF02594 Uncharacterised ACR, YggU family COG1872 BED35_RS04815 PF02325 BED35_RS04815 BED35_RS04820 PF03807 NADP oxidoreductase coenzyme F420-dependent BED35_RS04820 PF14748 Pyrroline-5-carboxylate reductase dimerisation BED35_RS04825 PF01168 Alanine racemase, N-terminal domain BED35_RS04830 PF00437 Type II/IV secretion system protein BED35_RS04835 PF04371 Porphyromonas-type peptidyl-arginine deiminase BED35_RS04840 PF00795 Carbon-nitrogen hydrolase BED35_RS04845 PF03652 Uncharacterised protein family (UPF0081) BED35_RS04850 PF02622 Uncharacterized ACR, COG1678 BED35_RS04855 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BED35_RS04855 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BED35_RS04860 PF04452 RNA methyltransferase BED35_RS04865 PF04231 Endonuclease I BED35_RS04870 PF10263 BED35_RS04870 BED35_RS04875 PF01022 Bacterial regulatory protein, arsR family BED35_RS04880 PF00872 BED35_RS04880 BED35_RS04885 PF04143 BED35_RS04885 BED35_RS04890 PF04143 BED35_RS04890 BED35_RS04895 PF00438 S-adenosylmethionine synthetase, N-terminal domain BED35_RS04895 PF02772 S-adenosylmethionine synthetase, central domain BED35_RS04895 PF02773 S-adenosylmethionine synthetase, C-terminal domain BED35_RS04900 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BED35_RS04900 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BED35_RS04905 PF00355 Rieske [2Fe-2S] domain BED35_RS04910 PF01435 Peptidase family M48 BED35_RS04915 PF00456 Transketolase, thiamine diphosphate binding domain BED35_RS04915 PF02779 Transketolase, pyrimidine binding domain BED35_RS04915 PF02780 Transketolase, C-terminal domain BED35_RS04920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED35_RS04920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BED35_RS04925 PF00162 Phosphoglycerate kinase BED35_RS04930 PF01116 Fructose-bisphosphate aldolase class-II BED35_RS04935 PF00102 Protein-tyrosine phosphatase BED35_RS04940 PF00924 Mechanosensitive ion channel BED35_RS04940 PF05552 Conserved TM helix BED35_RS04945 PF01548 BED35_RS04945 BED35_RS04945 PF02371 BED35_RS04945 BED35_RS04950 PF01810 BED35_RS04950 BED35_RS04955 PF04402 Protein of unknown function (DUF541) BED35_RS04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS04960 PF03466 LysR substrate binding domain BED35_RS04965 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BED35_RS04970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_RS04970 PF01842 ACT domain BED35_RS04970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED35_RS04975 PF13518 Helix-turn-helix domain BED35_RS05000 PF00080 Copper/zinc superoxide dismutase (SODC) BED35_RS05005 PF04055 Radical SAM superfamily BED35_RS05005 PF13394 4Fe-4S single cluster domain BED35_RS05025 PF01242 6-pyruvoyl tetrahydropterin synthase BED35_RS05030 PF00175 Oxidoreductase NAD-binding domain BED35_RS05030 PF00258 Flavodoxin BED35_RS05030 PF00667 FAD binding domain BED35_RS05035 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BED35_RS05035 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BED35_RS05040 PF01507 Phosphoadenosine phosphosulfate reductase family BED35_RS05045 PF15919 BED35_RS05045 BED35_RS05050 PF07927 YcfA-like protein BED35_RS05055 PF04389 Peptidase family M28 BED35_RS05060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS05060 PF10414 Sirohaem synthase dimerisation region BED35_RS05060 PF13241 Putative NAD(P)-binding BED35_RS05060 PF14824 Sirohaem biosynthesis protein central BED35_RS05065 PF01507 Phosphoadenosine phosphosulfate reductase family BED35_RS05070 PF00009 Elongation factor Tu GTP binding domain BED35_RS05075 PF01583 Adenylylsulphate kinase BED35_RS05080 PF12084 BED35_RS05080 BED35_RS05085 PF04977 Septum formation initiator BED35_RS05090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BED35_RS05095 PF02542 YgbB family BED35_RS05100 PF01142 tRNA pseudouridine synthase D (TruD) BED35_RS05105 PF01975 Survival protein SurE BED35_RS05110 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) BED35_RS05115 PF01476 LysM domain BED35_RS05115 PF01551 Peptidase family M23 BED35_RS05120 PF00140 Sigma-70 factor, region 1 BED35_RS05120 PF04539 Sigma-70 region 3 BED35_RS05120 PF04542 Sigma-70 region 2 BED35_RS05120 PF04545 Sigma-70, region 4 BED35_RS05125 PF00488 MutS domain V BED35_RS05125 PF01624 MutS domain I BED35_RS05125 PF05188 MutS domain II BED35_RS05125 PF05190 MutS family domain IV BED35_RS05125 PF05192 MutS domain III BED35_RS05130 PF04932 BED35_RS05130 BED35_RS05130 PF11846 BED35_RS05130 BED35_RS05130 PF15864 BED35_RS05130 BED35_RS05135 PF04703 FaeA-like protein BED35_RS05140 PF00419 Fimbrial protein BED35_RS05150 PF00577 Outer membrane usher protein BED35_RS05150 PF13953 PapC C-terminal domain BED35_RS05150 PF13954 PapC N-terminal domain BED35_RS05155 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS05155 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS05160 PF00419 Fimbrial protein BED35_RS05165 PF00419 Fimbrial protein BED35_RS05170 PF00419 Fimbrial protein BED35_RS05180 PF15959 BED35_RS05180 BED35_RS05185 PF01323 DSBA-like thioredoxin domain BED35_RS05195 PF00005 ABC transporter BED35_RS05195 PF00664 ABC transporter transmembrane region BED35_RS05195 PF03412 Peptidase C39 family BED35_RS05200 PF16576 BED35_RS05200 BED35_RS05205 PF00005 ABC transporter BED35_RS05205 PF02687 BED35_RS05205 BED35_RS05205 PF12704 MacB-like periplasmic core domain BED35_RS05210 PF02321 Outer membrane efflux protein BED35_RS05215 PF00109 Beta-ketoacyl synthase, N-terminal domain BED35_RS05215 PF02801 Beta-ketoacyl synthase, C-terminal domain BED35_RS05220 PF01575 MaoC like domain BED35_RS05225 PF00550 Phosphopantetheine attachment site BED35_RS05230 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS05235 PF00155 Aminotransferase class I and II BED35_RS05240 PF00034 Cytochrome c BED35_RS05240 PF03150 Di-haem cytochrome c peroxidase BED35_RS05240 PF14376 BED35_RS05240 BED35_RS05245 PF07883 Cupin domain BED35_RS05250 PF00009 Elongation factor Tu GTP binding domain BED35_RS05250 PF00679 Elongation factor G C-terminus BED35_RS05250 PF03144 Elongation factor Tu domain 2 BED35_RS05250 PF03764 Elongation factor G, domain IV BED35_RS05250 PF14492 Elongation Factor G, domain II BED35_RS05255 PF12840 Helix-turn-helix domain BED35_RS05260 PF00107 Zinc-binding dehydrogenase BED35_RS05260 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS05265 PF03613 BED35_RS05265 BED35_RS05270 PF03609 BED35_RS05270 BED35_RS05280 PF03610 PTS system fructose IIA component BED35_RS05285 PF04198 Putative sugar-binding domain BED35_RS05290 PF00795 Carbon-nitrogen hydrolase BED35_RS05295 PF03861 ANTAR domain BED35_RS05300 PF13433 Periplasmic binding protein domain BED35_RS05305 PF03069 Acetamidase/Formamidase family BED35_RS05310 PF00005 ABC transporter BED35_RS05315 PF00005 ABC transporter BED35_RS05320 PF02653 BED35_RS05320 BED35_RS05325 PF02653 BED35_RS05325 BED35_RS05330 PF13433 Periplasmic binding protein domain BED35_RS05335 PF05681 BED35_RS05335 BED35_RS05335 PF05683 Fumarase C-terminus BED35_RS05340 PF00384 Molybdopterin oxidoreductase BED35_RS05340 PF01568 Molydopterin dinucleotide binding domain BED35_RS05340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS05345 PF12800 4Fe-4S binding domain BED35_RS05345 PF13247 4Fe-4S dicluster domain BED35_RS05350 PF04976 BED35_RS05350 BED35_RS05355 PF02613 Nitrate reductase delta subunit BED35_RS05360 PF01548 BED35_RS05360 BED35_RS05360 PF02371 BED35_RS05360 BED35_RS05365 PF07690 Major Facilitator Superfamily BED35_RS05370 PF02464 Competence-damaged protein BED35_RS05375 PF00154 recA bacterial DNA recombination protein BED35_RS05380 PF02631 RecX family BED35_RS05385 PF01411 tRNA synthetases class II (A) BED35_RS05385 PF02272 DHHA1 domain BED35_RS05385 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BED35_RS05390 PF02599 Global regulator protein family BED35_RS05410 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS05420 PF04262 Glutamate-cysteine ligase BED35_RS05425 PF02664 S-Ribosylhomocysteinase (LuxS) BED35_RS05430 PF03471 Transporter associated domain BED35_RS05435 PF01548 BED35_RS05435 BED35_RS05435 PF02371 BED35_RS05435 BED35_RS05445 PF01578 BED35_RS05445 BED35_RS05450 PF00448 SRP54-type protein, GTPase domain BED35_RS05450 PF02881 SRP54-type protein, helical bundle domain BED35_RS05450 PF02978 Signal peptide binding domain BED35_RS05455 PF00886 Ribosomal protein S16 BED35_RS05460 PF01782 RimM N-terminal domain BED35_RS05460 PF05239 PRC-barrel domain BED35_RS05465 PF01746 tRNA (Guanine-1)-methyltransferase BED35_RS05470 PF01245 Ribosomal protein L19 BED35_RS05480 PF03605 BED35_RS05480 BED35_RS05485 PF00072 Response regulator receiver domain BED35_RS05485 PF04397 LytTr DNA-binding domain BED35_RS05490 PF00793 DAHP synthetase I family BED35_RS05495 PF01817 Chorismate mutase type II BED35_RS05495 PF02153 Prephenate dehydrogenase BED35_RS05500 PF00800 Prephenate dehydratase BED35_RS05500 PF01817 Chorismate mutase type II BED35_RS05505 PF01548 BED35_RS05505 BED35_RS05505 PF02371 BED35_RS05505 BED35_RS05510 PF00004 ATPase family associated with various cellular activities (AAA) BED35_RS05510 PF02861 Clp amino terminal domain BED35_RS05510 PF07724 AAA domain (Cdc48 subfamily) BED35_RS05510 PF10431 C-terminal, D2-small domain, of ClpB protein BED35_RS05515 PF02578 Multi-copper polyphenol oxidoreductase laccase BED35_RS05520 PF00849 RNA pseudouridylate synthase BED35_RS05520 PF01479 S4 domain BED35_RS05525 PF13525 Outer membrane lipoprotein BED35_RS05530 PF05598 BED35_RS05530 BED35_RS05530 PF13751 BED35_RS05530 BED35_RS05535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BED35_RS05540 PF00872 BED35_RS05540 BED35_RS05545 PF01548 BED35_RS05545 BED35_RS05545 PF02371 BED35_RS05545 BED35_RS05575 PF10043 BED35_RS05575 BED35_RS05580 PF13091 PLD-like domain BED35_RS05585 PF00583 Acetyltransferase (GNAT) family BED35_RS05585 PF13380 CoA binding domain BED35_RS05585 PF13549 ATP-grasp domain BED35_RS05585 PF13607 Succinyl-CoA ligase like flavodoxin domain BED35_RS05590 PF03942 BED35_RS05590 BED35_RS05595 PF00085 Thioredoxin BED35_RS05600 PF00588 SpoU rRNA Methylase family BED35_RS05600 PF08032 RNA 2'-O ribose methyltransferase substrate binding BED35_RS05605 PF07690 Major Facilitator Superfamily BED35_RS05610 PF00529 HlyD family secretion protein BED35_RS05610 PF16576 BED35_RS05610 BED35_RS05615 PF02321 Outer membrane efflux protein BED35_RS05620 PF01047 MarR family BED35_RS05625 PF05437 BED35_RS05625 BED35_RS05630 PF03591 BED35_RS05630 BED35_RS05635 PF07690 Major Facilitator Superfamily BED35_RS05645 PF11533 Protein of unknown function (DUF3225) BED35_RS05650 PF01425 Amidase BED35_RS05655 PF13318 BED35_RS05655 BED35_RS05660 PF01380 SIS domain BED35_RS05660 PF01418 Helix-turn-helix domain, rpiR family BED35_RS05665 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS05670 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS05675 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS05680 PF00005 ABC transporter BED35_RS05685 PF00266 Aminotransferase class-V BED35_RS05690 PF01546 Peptidase family M20/M25/M40 BED35_RS05695 PF00795 Carbon-nitrogen hydrolase BED35_RS05700 PF00155 Aminotransferase class I and II BED35_RS05705 PF00589 Phage integrase family BED35_RS05705 PF12167 BED35_RS05705 BED35_RS05710 PF06806 Putative excisionase (DUF1233) BED35_RS05715 PF05063 BED35_RS05715 BED35_RS05750 PF07026 BED35_RS05750 BED35_RS05755 PF03837 BED35_RS05755 BED35_RS05760 PF12684 PDDEXK-like domain of unknown function (DUF3799) BED35_RS05800 PF10965 BED35_RS05800 BED35_RS05805 PF15968 BED35_RS05805 BED35_RS05810 PF15969 BED35_RS05810 BED35_RS05815 PF00717 Peptidase S24-like BED35_RS05815 PF01381 Helix-turn-helix BED35_RS05820 PF09048 Cro BED35_RS05825 PF05269 Bacteriophage CII protein BED35_RS05835 PF04492 BED35_RS05835 BED35_RS05840 PF01695 IstB-like ATP binding protein BED35_RS05855 PF04448 BED35_RS05855 BED35_RS05865 PF05772 NinB protein BED35_RS05875 PF07102 Protein of unknown function (DUF1364) BED35_RS05880 PF05866 Endodeoxyribonuclease RusA BED35_RS05890 PF03589 Antitermination protein BED35_RS05905 PF00959 Phage lysozyme BED35_RS05910 PF03245 BED35_RS05910 BED35_RS05915 PF09669 BED35_RS05915 BED35_RS05920 PF11133 Head fiber protein BED35_RS05940 PF03237 Terminase-like family BED35_RS05945 PF06381 BED35_RS05945 BED35_RS05950 PF04233 BED35_RS05950 BED35_RS05960 PF09979 BED35_RS05960 BED35_RS05980 PF13262 BED35_RS05980 BED35_RS06000 PF11863 BED35_RS06000 BED35_RS06015 PF01464 Transglycosylase SLT domain BED35_RS06045 PF06890 Bacteriophage Mu Gp45 protein BED35_RS06055 PF04865 BED35_RS06055 BED35_RS06060 PF11041 BED35_RS06060 BED35_RS06075 PF00596 Class II Aldolase and Adducin N-terminal domain BED35_RS06085 PF03079 ARD/ARD' family BED35_RS06090 PF01008 Initiation factor 2 subunit family BED35_RS06095 PF01636 Phosphotransferase enzyme family BED35_RS06100 PF08479 POTRA domain, ShlB-type BED35_RS06115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BED35_RS06115 PF02770 Acyl-CoA dehydrogenase, middle domain BED35_RS06115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BED35_RS06115 PF09317 BED35_RS06115 BED35_RS06120 PF13580 SIS domain BED35_RS06125 PF13230 Glutamine amidotransferases class-II BED35_RS06130 PF03734 L,D-transpeptidase catalytic domain BED35_RS06135 PF05896 BED35_RS06135 BED35_RS06135 PF11973 BED35_RS06135 BED35_RS06140 PF03116 BED35_RS06140 BED35_RS06145 PF04205 FMN-binding domain BED35_RS06150 PF02508 BED35_RS06150 BED35_RS06160 PF00111 2Fe-2S iron-sulfur cluster binding domain BED35_RS06160 PF00175 Oxidoreductase NAD-binding domain BED35_RS06160 PF00970 Oxidoreductase FAD-binding domain BED35_RS06165 PF02424 ApbE family BED35_RS06170 PF04400 BED35_RS06170 BED35_RS06175 PF03009 Glycerophosphoryl diester phosphodiesterase family BED35_RS06180 PF01820 D-ala D-ala ligase N-terminus BED35_RS06180 PF07478 D-ala D-ala ligase C-terminus BED35_RS06185 PF08348 BED35_RS06185 BED35_RS06185 PF13309 BED35_RS06185 BED35_RS06190 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS06200 PF00817 impB/mucB/samB family BED35_RS06200 PF11798 IMS family HHH motif BED35_RS06200 PF11799 impB/mucB/samB family C-terminal domain BED35_RS06205 PF01546 Peptidase family M20/M25/M40 BED35_RS06205 PF07687 Peptidase dimerisation domain BED35_RS06210 PF00156 Phosphoribosyl transferase domain BED35_RS06215 PF01548 BED35_RS06215 BED35_RS06215 PF02371 BED35_RS06215 BED35_RS06220 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BED35_RS06225 PF07417 Transcriptional regulator Crl BED35_RS06230 PF00696 Amino acid kinase family BED35_RS06230 PF01472 PUA domain BED35_RS06235 PF00171 Aldehyde dehydrogenase family BED35_RS06240 PF00392 Bacterial regulatory proteins, gntR family BED35_RS06240 PF07702 UTRA domain BED35_RS06245 PF00367 phosphotransferase system, EIIB BED35_RS06245 PF02378 Phosphotransferase system, EIIC BED35_RS06250 PF02056 Family 4 glycosyl hydrolase BED35_RS06250 PF11975 Family 4 glycosyl hydrolase C-terminal domain BED35_RS06255 PF07238 PilZ domain BED35_RS06255 PF07317 Flagellar regulator YcgR BED35_RS06260 PF06165 Glycosyltransferase family 36 BED35_RS06260 PF10091 Putative glucoamylase BED35_RS06260 PF17167 BED35_RS06260 BED35_RS06270 PF00583 Acetyltransferase (GNAT) family BED35_RS06275 PF08241 Methyltransferase domain BED35_RS06280 PF07338 Protein of unknown function (DUF1471) BED35_RS06295 PF00593 TonB dependent receptor BED35_RS06295 PF07715 TonB-dependent Receptor Plug Domain BED35_RS06300 PF01202 Shikimate kinase BED35_RS06305 PF06865 Protein of unknown function (DUF1255) BED35_RS06310 PF04381 Putative exonuclease, RdgC BED35_RS06315 PF00480 ROK family BED35_RS06320 PF13476 AAA domain BED35_RS06320 PF13558 Putative exonuclease SbcCD, C subunit BED35_RS06325 PF00149 Calcineurin-like phosphoesterase BED35_RS06325 PF12320 Type 5 capsule protein repressor C-terminal domain BED35_RS06330 PF00072 Response regulator receiver domain BED35_RS06330 PF00486 Transcriptional regulatory protein, C terminal BED35_RS06335 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS06335 PF00989 PAS fold BED35_RS06335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS06335 PF11808 BED35_RS06335 BED35_RS06340 PF12849 PBP superfamily domain BED35_RS06345 PF05525 BED35_RS06345 BED35_RS06350 PF00324 Amino acid permease BED35_RS06355 PF00128 Alpha amylase, catalytic domain BED35_RS06355 PF02903 Alpha amylase, N-terminal ig-like domain BED35_RS06360 PF00106 short chain dehydrogenase BED35_RS06365 PF01019 Gamma-glutamyltranspeptidase BED35_RS06370 PF01848 BED35_RS06370 BED35_RS06375 PF00578 AhpC/TSA family BED35_RS06375 PF10417 C-terminal domain of 1-Cys peroxiredoxin BED35_RS06380 PF04336 BED35_RS06380 BED35_RS06385 PF02547 Queuosine biosynthesis protein BED35_RS06390 PF12697 Alpha/beta hydrolase family BED35_RS06395 PF01702 Queuine tRNA-ribosyltransferase BED35_RS06400 PF02699 Preprotein translocase subunit BED35_RS06405 PF02355 Protein export membrane protein BED35_RS06405 PF07549 SecD/SecF GG Motif BED35_RS06405 PF13721 SecD export protein N-terminal TM region BED35_RS06410 PF02355 Protein export membrane protein BED35_RS06410 PF07549 SecD/SecF GG Motif BED35_RS06425 PF03477 ATP cone domain BED35_RS06430 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BED35_RS06430 PF01872 RibD C-terminal domain BED35_RS06435 PF00885 6,7-dimethyl-8-ribityllumazine synthase BED35_RS06440 PF01029 NusB family BED35_RS06445 PF00586 AIR synthase related protein, N-terminal domain BED35_RS06445 PF02769 AIR synthase related protein, C-terminal domain BED35_RS06450 PF04608 Phosphatidylglycerophosphatase A BED35_RS06455 PF01548 BED35_RS06455 BED35_RS06455 PF02371 BED35_RS06455 BED35_RS06460 PF02779 Transketolase, pyrimidine binding domain BED35_RS06460 PF02780 Transketolase, C-terminal domain BED35_RS06460 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BED35_RS06465 PF00348 Polyprenyl synthetase BED35_RS06470 PF02609 Exonuclease VII small subunit BED35_RS06475 PF02568 Thiamine biosynthesis protein (ThiI) BED35_RS06475 PF02926 THUMP domain BED35_RS06480 PF01965 DJ-1/PfpI family BED35_RS06485 PF02558 Ketopantoate reductase PanE/ApbA BED35_RS06485 PF08546 Ketopantoate reductase PanE/ApbA C terminal BED35_RS06490 PF04461 Protein of unknown function (DUF520) BED35_RS06495 PF07690 Major Facilitator Superfamily BED35_RS06500 PF01040 UbiA prenyltransferase family BED35_RS06505 PF03626 BED35_RS06505 BED35_RS06510 PF00510 Cytochrome c oxidase subunit III BED35_RS06515 PF00115 Cytochrome C and Quinol oxidase polypeptide I BED35_RS06520 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BED35_RS06520 PF06481 COX Aromatic Rich Motif BED35_RS06525 PF03502 Nucleoside-specific channel-forming protein, Tsx BED35_RS06530 PF07690 Major Facilitator Superfamily BED35_RS06535 PF03923 BED35_RS06535 BED35_RS06535 PF08139 BED35_RS06535 BED35_RS06540 PF01722 BolA-like protein BED35_RS06550 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED35_RS06550 PF05697 Bacterial trigger factor protein (TF) BED35_RS06550 PF05698 Bacterial trigger factor protein (TF) C-terminus BED35_RS06555 PF00574 Clp protease BED35_RS06560 PF06689 ClpX C4-type zinc finger BED35_RS06560 PF07724 AAA domain (Cdc48 subfamily) BED35_RS06560 PF10431 C-terminal, D2-small domain, of ClpB protein BED35_RS06565 PF00004 ATPase family associated with various cellular activities (AAA) BED35_RS06565 PF02190 ATP-dependent protease La (LON) domain BED35_RS06565 PF05362 Lon protease (S16) C-terminal proteolytic domain BED35_RS06570 PF00216 Bacterial DNA-binding protein BED35_RS06575 PF13145 PPIC-type PPIASE domain BED35_RS06575 PF13624 SurA N-terminal domain BED35_RS06580 PF12836 Helix-hairpin-helix motif BED35_RS06585 PF13279 Thioesterase-like superfamily BED35_RS06590 PF06508 Queuosine biosynthesis protein QueC BED35_RS06595 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS06595 PF12793 BED35_RS06595 BED35_RS06600 PF08282 haloacid dehalogenase-like hydrolase BED35_RS06605 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS06610 PF01037 AsnC family BED35_RS06610 PF13412 Winged helix-turn-helix DNA-binding BED35_RS06615 PF00005 ABC transporter BED35_RS06615 PF00664 ABC transporter transmembrane region BED35_RS06620 PF00005 ABC transporter BED35_RS06620 PF00664 ABC transporter transmembrane region BED35_RS06625 PF00543 Nitrogen regulatory protein P-II BED35_RS06630 PF00909 Ammonium Transporter Family BED35_RS06635 PF13622 Thioesterase-like superfamily BED35_RS06640 PF09619 Type III secretion system lipoprotein chaperone (YscW) BED35_RS06645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BED35_RS06655 PF05321 Haemolysin expression modulating protein BED35_RS06660 PF10757 BED35_RS06660 BED35_RS06670 PF00005 ABC transporter BED35_RS06675 PF00950 BED35_RS06675 BED35_RS06680 PF01297 Periplasmic solute binding protein family BED35_RS06685 PF00444 Ribosomal protein L36 BED35_RS06690 PF01197 Ribosomal protein L31 BED35_RS06695 PF10797 BED35_RS06695 BED35_RS06700 PF10941 BED35_RS06700 BED35_RS06705 PF01676 Metalloenzyme superfamily BED35_RS06710 PF01168 Alanine racemase, N-terminal domain BED35_RS06715 PF00874 PRD domain BED35_RS06720 PF00873 AcrB/AcrD/AcrF family BED35_RS06725 PF00529 HlyD family secretion protein BED35_RS06725 PF16576 BED35_RS06725 BED35_RS06730 PF00440 Bacterial regulatory proteins, tetR family BED35_RS06730 PF08361 MAATS-type transcriptional repressor, C-terminal region BED35_RS06735 PF02635 DsrE/DsrF-like family BED35_RS06745 PF10689 BED35_RS06745 BED35_RS06750 PF07445 Primosomal replication protein priB and priC BED35_RS06755 PF04304 BED35_RS06755 BED35_RS06760 PF00156 Phosphoribosyl transferase domain BED35_RS06765 PF12168 BED35_RS06765 BED35_RS06765 PF12169 DNA polymerase III subunits gamma and tau domain III BED35_RS06765 PF12170 DNA polymerase III tau subunit V interacting with alpha BED35_RS06765 PF13177 DNA polymerase III, delta subunit BED35_RS06770 PF02575 YbaB/EbfC DNA-binding family BED35_RS06775 PF02132 RecR protein BED35_RS06775 PF13662 Toprim domain BED35_RS06780 PF00183 Hsp90 protein BED35_RS06780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS06785 PF00406 Adenylate kinase BED35_RS06785 PF05191 Adenylate kinase, active site lid BED35_RS06790 PF00762 Ferrochelatase BED35_RS06795 PF01943 BED35_RS06795 BED35_RS06800 PF00535 Glycosyl transferase family 2 BED35_RS06805 PF00535 Glycosyl transferase family 2 BED35_RS06810 PF00534 Glycosyl transferases group 1 BED35_RS06810 PF13439 Glycosyltransferase Family 4 BED35_RS06815 PF00534 Glycosyl transferases group 1 BED35_RS06815 PF13439 Glycosyltransferase Family 4 BED35_RS06820 PF00953 Glycosyl transferase family 4 BED35_RS06825 PF02719 Polysaccharide biosynthesis protein BED35_RS06830 PF00534 Glycosyl transferases group 1 BED35_RS06830 PF13439 Glycosyltransferase Family 4 BED35_RS06835 PF01370 NAD dependent epimerase/dehydratase family BED35_RS06840 PF00294 pfkB family carbohydrate kinase BED35_RS06845 PF00999 Sodium/hydrogen exchanger family BED35_RS06845 PF02254 TrkA-N domain BED35_RS06850 PF07690 Major Facilitator Superfamily BED35_RS06855 PF00149 Calcineurin-like phosphoesterase BED35_RS06865 PF04073 Aminoacyl-tRNA editing domain BED35_RS06870 PF01963 BED35_RS06870 BED35_RS06875 PF00122 E1-E2 ATPase BED35_RS06875 PF00403 Heavy-metal-associated domain BED35_RS06875 PF00702 haloacid dehalogenase-like hydrolase BED35_RS06880 PF13411 MerR HTH family regulatory protein BED35_RS06885 PF01957 NfeD-like C-terminal, partner-binding BED35_RS06890 PF01145 SPFH domain / Band 7 family BED35_RS06895 PF00085 Thioredoxin BED35_RS06895 PF14559 Tetratricopeptide repeat BED35_RS06895 PF14561 Tetratricopeptide repeat BED35_RS06900 PF00106 short chain dehydrogenase BED35_RS06905 PF13472 GDSL-like Lipase/Acylhydrolase family BED35_RS06910 PF00005 ABC transporter BED35_RS06915 PF02687 BED35_RS06915 BED35_RS06920 PF02222 ATP-grasp domain BED35_RS06925 PF00731 AIR carboxylase BED35_RS06930 PF00149 Calcineurin-like phosphoesterase BED35_RS06935 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BED35_RS06940 PF01406 tRNA synthetases class I (C) catalytic domain BED35_RS06940 PF09190 DALR domain BED35_RS06945 PF13275 S4 domain BED35_RS06950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BED35_RS06950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BED35_RS06960 PF00589 Phage integrase family BED35_RS06965 PF05063 BED35_RS06965 BED35_RS07000 PF07026 BED35_RS07000 BED35_RS07005 PF03837 BED35_RS07005 BED35_RS07010 PF12684 PDDEXK-like domain of unknown function (DUF3799) BED35_RS07050 PF00717 Peptidase S24-like BED35_RS07060 PF05269 Bacteriophage CII protein BED35_RS07070 PF04492 BED35_RS07070 BED35_RS07075 PF01695 IstB-like ATP binding protein BED35_RS07090 PF04448 BED35_RS07090 BED35_RS07100 PF05772 NinB protein BED35_RS07110 PF07102 Protein of unknown function (DUF1364) BED35_RS07115 PF05866 Endodeoxyribonuclease RusA BED35_RS07125 PF03589 Antitermination protein BED35_RS07135 PF16083 BED35_RS07135 BED35_RS07140 PF13539 D-alanyl-D-alanine carboxypeptidase BED35_RS07145 PF10721 BED35_RS07145 BED35_RS07160 PF06440 DNA polymerase III, theta subunit BED35_RS07180 PF05876 BED35_RS07180 BED35_RS07185 PF02831 gpW BED35_RS07190 PF05136 BED35_RS07190 BED35_RS07195 PF01343 Peptidase family S49 BED35_RS07205 PF02924 Bacteriophage lambda head decoration protein D BED35_RS07210 PF03864 Phage major capsid protein E BED35_RS07230 PF10948 BED35_RS07230 BED35_RS07235 PF04984 Phage tail sheath protein BED35_RS07240 PF10618 BED35_RS07240 BED35_RS07250 PF01464 Transglycosylase SLT domain BED35_RS07255 PF07157 BED35_RS07255 BED35_RS07260 PF05954 Phage late control gene D protein (GPD) BED35_RS07265 PF06890 Bacteriophage Mu Gp45 protein BED35_RS07270 PF07409 BED35_RS07270 BED35_RS07275 PF04865 BED35_RS07275 BED35_RS07280 PF10076 BED35_RS07280 BED35_RS07295 PF01757 BED35_RS07295 BED35_RS07300 PF00589 Phage integrase family BED35_RS07305 PF05063 BED35_RS07305 BED35_RS07350 PF13479 BED35_RS07350 BED35_RS07385 PF10965 BED35_RS07385 BED35_RS07390 PF15968 BED35_RS07390 BED35_RS07395 PF15969 BED35_RS07395 BED35_RS07400 PF00717 Peptidase S24-like BED35_RS07400 PF01381 Helix-turn-helix BED35_RS07405 PF15943 BED35_RS07405 BED35_RS07410 PF05269 Bacteriophage CII protein BED35_RS07415 PF02767 DNA polymerase III beta subunit, central domain BED35_RS07420 PF04492 BED35_RS07420 BED35_RS07425 PF00772 DnaB-like helicase N terminal domain BED35_RS07425 PF03796 DnaB-like helicase C terminal domain BED35_RS07450 PF15944 BED35_RS07450 BED35_RS07455 PF07105 BED35_RS07455 BED35_RS07465 PF01844 HNH endonuclease BED35_RS07470 PF10765 Protein of unknown function (DUF2591) BED35_RS07475 PF00149 Calcineurin-like phosphoesterase BED35_RS07485 PF05766 BED35_RS07485 BED35_RS07490 PF06322 BED35_RS07490 BED35_RS07495 PF06530 BED35_RS07495 BED35_RS07510 PF16083 BED35_RS07510 BED35_RS07515 PF00959 Phage lysozyme BED35_RS07520 PF03245 BED35_RS07520 BED35_RS07525 PF04383 KilA-N domain BED35_RS07545 PF10045 BED35_RS07545 BED35_RS07555 PF13264 BED35_RS07555 BED35_RS07565 PF11651 P22 coat protein - gene protein 5 BED35_RS07590 PF04984 Phage tail sheath protein BED35_RS07610 PF03869 Arc-like DNA binding domain BED35_RS07615 PF02498 BED35_RS07615 BED35_RS07620 PF03374 BED35_RS07620 BED35_RS07620 PF04383 KilA-N domain BED35_RS07660 PF04865 BED35_RS07660 BED35_RS07680 PF13356 Domain of unknown function (DUF4102) BED35_RS07685 PF00589 Phage integrase family BED35_RS07705 PF02661 Fic/DOC family BED35_RS07705 PF13784 Fic/DOC family N-terminal BED35_RS07715 PF05973 BED35_RS07715 BED35_RS07720 PF05930 Prophage CP4-57 regulatory protein (AlpA) BED35_RS07770 PF00072 Response regulator receiver domain BED35_RS07770 PF00486 Transcriptional regulatory protein, C terminal BED35_RS07775 PF01738 Dienelactone hydrolase family BED35_RS07780 PF01548 BED35_RS07780 BED35_RS07780 PF02371 BED35_RS07780 BED35_RS07790 PF08007 Cupin superfamily protein BED35_RS07800 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BED35_RS07805 PF00005 ABC transporter BED35_RS07805 PF00664 ABC transporter transmembrane region BED35_RS07810 PF03992 Antibiotic biosynthesis monooxygenase BED35_RS07815 PF08971 Glycogen synthesis protein BED35_RS07820 PF00149 Calcineurin-like phosphoesterase BED35_RS07835 PF00313 'Cold-shock' DNA-binding domain BED35_RS07840 PF00313 'Cold-shock' DNA-binding domain BED35_RS07845 PF02537 BED35_RS07845 BED35_RS07850 PF00990 GGDEF domain BED35_RS07850 PF05230 BED35_RS07850 BED35_RS07855 PF02416 mttA/Hcf106 family BED35_RS07860 PF04055 Radical SAM superfamily BED35_RS07860 PF16881 BED35_RS07860 BED35_RS07865 PF03099 Biotin/lipoate A/B protein ligase family BED35_RS07870 PF04359 Protein of unknown function (DUF493) BED35_RS07875 PF00768 D-alanyl-D-alanine carboxypeptidase BED35_RS07875 PF07943 Penicillin-binding protein 5, C-terminal domain BED35_RS07880 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel BED35_RS07880 PF05036 Sporulation related domain BED35_RS07885 PF01098 BED35_RS07885 BED35_RS07890 PF00905 Penicillin binding protein transpeptidase domain BED35_RS07890 PF03717 Penicillin-binding Protein dimerisation domain BED35_RS07895 PF02590 Predicted SPOUT methyltransferase BED35_RS07900 PF02410 Oligomerisation domain BED35_RS07905 PF01467 Cytidylyltransferase BED35_RS07910 PF06144 DNA polymerase III, delta subunit BED35_RS07910 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BED35_RS07915 PF04390 Lipopolysaccharide-assembly BED35_RS07920 PF00133 tRNA synthetases class I (I, L, M and V) BED35_RS07920 PF08264 Anticodon-binding domain of tRNA BED35_RS07920 PF13603 Leucyl-tRNA synthetase, Domain 2 BED35_RS07925 PF07295 BED35_RS07925 BED35_RS07930 PF00005 ABC transporter BED35_RS07935 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS07940 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS07945 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS07950 PF01243 Pyridoxamine 5'-phosphate oxidase BED35_RS07955 PF00795 Carbon-nitrogen hydrolase BED35_RS07960 PF00571 CBS domain BED35_RS07960 PF03471 Transporter associated domain BED35_RS07965 PF02130 Uncharacterized protein family UPF0054 BED35_RS07970 PF02562 PhoH-like protein BED35_RS07975 PF00919 Uncharacterized protein family UPF0004 BED35_RS07975 PF01938 TRAM domain BED35_RS07975 PF04055 Radical SAM superfamily BED35_RS07980 PF01494 FAD binding domain BED35_RS08015 PF00733 Asparagine synthase BED35_RS08015 PF13537 Glutamine amidotransferase domain BED35_RS08020 PF13242 HAD-hyrolase-like BED35_RS08020 PF13344 Haloacid dehalogenase-like hydrolase BED35_RS08025 PF00480 ROK family BED35_RS08025 PF01047 MarR family BED35_RS08030 PF01979 Amidohydrolase family BED35_RS08035 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BED35_RS08045 PF00749 tRNA synthetases class I (E and Q), catalytic domain BED35_RS08045 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BED35_RS08050 PF03573 outer membrane porin, OprD family BED35_RS08055 PF13982 BED35_RS08055 BED35_RS08060 PF00728 Glycosyl hydrolase family 20, catalytic domain BED35_RS08060 PF02838 Glycosyl hydrolase family 20, domain 2 BED35_RS08060 PF03173 Putative carbohydrate binding domain BED35_RS08060 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BED35_RS08065 PF01475 Ferric uptake regulator family BED35_RS08070 PF00258 Flavodoxin BED35_RS08075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS08075 PF02203 Tar ligand binding domain homologue BED35_RS08080 PF01402 Ribbon-helix-helix protein, copG family BED35_RS08085 PF12697 Alpha/beta hydrolase family BED35_RS08090 PF03925 SeqA protein BED35_RS08095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BED35_RS08095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BED35_RS08095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BED35_RS08095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BED35_RS08105 PF00892 EamA-like transporter family BED35_RS08110 PF00072 Response regulator receiver domain BED35_RS08110 PF00486 Transcriptional regulatory protein, C terminal BED35_RS08115 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS08115 PF00582 Universal stress protein family BED35_RS08115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS08115 PF02702 Osmosensitive K+ channel His kinase sensor domain BED35_RS08115 PF13492 GAF domain BED35_RS08115 PF13493 Domain of unknown function (DUF4118) BED35_RS08120 PF02669 BED35_RS08120 BED35_RS08125 PF00122 E1-E2 ATPase BED35_RS08125 PF00702 haloacid dehalogenase-like hydrolase BED35_RS08130 PF03814 BED35_RS08130 BED35_RS08135 PF09604 BED35_RS08135 BED35_RS08140 PF10725 BED35_RS08140 BED35_RS08150 PF02794 BED35_RS08150 BED35_RS08160 PF08349 BED35_RS08160 BED35_RS08165 PF00875 DNA photolyase BED35_RS08165 PF03441 FAD binding domain of DNA photolyase BED35_RS08170 PF02112 BED35_RS08170 BED35_RS08175 PF01784 NIF3 (NGG1p interacting factor 3) BED35_RS08180 PF02682 Allophanate hydrolase subunit 1 BED35_RS08185 PF02626 Allophanate hydrolase subunit 2 BED35_RS08190 PF03746 LamB/YcsF family BED35_RS08195 PF06149 BED35_RS08195 BED35_RS08200 PF06166 BED35_RS08200 BED35_RS08205 PF01470 Pyroglutamyl peptidase BED35_RS08210 PF00285 Citrate synthase BED35_RS08215 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BED35_RS08225 PF00890 FAD binding domain BED35_RS08225 PF02910 Fumarate reductase flavoprotein C-term BED35_RS08230 PF13085 2Fe-2S iron-sulfur cluster binding domain BED35_RS08230 PF13534 4Fe-4S dicluster domain BED35_RS08235 PF00676 Dehydrogenase E1 component BED35_RS08235 PF02779 Transketolase, pyrimidine binding domain BED35_RS08235 PF16078 BED35_RS08235 BED35_RS08235 PF16870 BED35_RS08235 BED35_RS08240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BED35_RS08240 PF00364 Biotin-requiring enzyme BED35_RS08240 PF02817 e3 binding domain BED35_RS08245 PF00549 CoA-ligase BED35_RS08245 PF08442 ATP-grasp domain BED35_RS08250 PF00549 CoA-ligase BED35_RS08250 PF02629 CoA binding domain BED35_RS08255 PF00149 Calcineurin-like phosphoesterase BED35_RS08255 PF02872 5'-nucleotidase, C-terminal domain BED35_RS08260 PF01654 BED35_RS08260 BED35_RS08265 PF02322 BED35_RS08265 BED35_RS08270 PF08173 BED35_RS08270 BED35_RS08275 PF09600 BED35_RS08275 BED35_RS08280 PF03061 Thioesterase superfamily BED35_RS08285 PF01618 BED35_RS08285 BED35_RS08290 PF02472 Biopolymer transport protein ExbD/TolR BED35_RS08295 PF06519 TolA C-terminal BED35_RS08300 PF04052 TolB amino-terminal domain BED35_RS08300 PF07676 WD40-like Beta Propeller Repeat BED35_RS08305 PF00691 OmpA family BED35_RS08310 PF13174 Tetratricopeptide repeat BED35_RS08310 PF13432 Tetratricopeptide repeat BED35_RS08310 PF16331 BED35_RS08310 BED35_RS08335 PF02445 Quinolinate synthetase A protein BED35_RS08340 PF04973 BED35_RS08340 BED35_RS08345 PF01545 Cation efflux family BED35_RS08350 PF00793 DAHP synthetase I family BED35_RS08355 PF00300 Histidine phosphatase superfamily (branch 1) BED35_RS08360 PF01223 DNA/RNA non-specific endonuclease BED35_RS08370 PF00082 Subtilase family BED35_RS08375 PF07769 BED35_RS08375 BED35_RS08380 PF01263 Aldose 1-epimerase BED35_RS08385 PF00288 GHMP kinases N terminal domain BED35_RS08385 PF08544 GHMP kinases C terminal BED35_RS08385 PF10509 Galactokinase galactose-binding signature BED35_RS08390 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BED35_RS08390 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BED35_RS08395 PF16363 BED35_RS08395 BED35_RS08400 PF02517 CAAX protease self-immunity BED35_RS08405 PF00005 ABC transporter BED35_RS08410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS08410 PF03459 TOBE domain BED35_RS08415 PF10766 Protein of unknown function (DUF2592) BED35_RS08420 PF13531 Bacterial extracellular solute-binding protein BED35_RS08425 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS08430 PF00005 ABC transporter BED35_RS08430 PF03459 TOBE domain BED35_RS08435 PF08282 haloacid dehalogenase-like hydrolase BED35_RS08440 PF10282 Lactonase, 7-bladed beta-propeller BED35_RS08445 PF00202 Aminotransferase class-III BED35_RS08450 PF04055 Radical SAM superfamily BED35_RS08450 PF06968 Biotin and Thiamin Synthesis associated domain BED35_RS08455 PF00155 Aminotransferase class I and II BED35_RS08460 PF08241 Methyltransferase domain BED35_RS08465 PF13500 AAA domain BED35_RS08470 PF00005 ABC transporter BED35_RS08475 PF00271 Helicase conserved C-terminal domain BED35_RS08475 PF02151 UvrB/uvrC motif BED35_RS08475 PF04851 Type III restriction enzyme, res subunit BED35_RS08475 PF12344 Ultra-violet resistance protein B BED35_RS08480 PF09905 Uncharacterized conserved protein (DUF2132) BED35_RS08485 PF01933 Uncharacterised protein family UPF0052 BED35_RS08490 PF04055 Radical SAM superfamily BED35_RS08490 PF06463 Molybdenum Cofactor Synthesis C BED35_RS08490 PF13353 4Fe-4S single cluster domain BED35_RS08495 PF01967 MoaC family BED35_RS08500 PF02597 ThiS family BED35_RS08505 PF02391 MoaE protein BED35_RS08510 PF01027 Inhibitor of apoptosis-promoting Bax1 BED35_RS08515 PF12698 ABC-2 family transporter protein BED35_RS08520 PF12698 ABC-2 family transporter protein BED35_RS08525 PF00005 ABC transporter BED35_RS08530 PF16576 BED35_RS08530 BED35_RS08535 PF00440 Bacterial regulatory proteins, tetR family BED35_RS08535 PF09209 Domain of unknown function (DUF1956) BED35_RS08540 PF00270 DEAD/DEAH box helicase BED35_RS08540 PF00271 Helicase conserved C-terminal domain BED35_RS08545 PF01207 Dihydrouridine synthase (Dus) BED35_RS08555 PF00571 CBS domain BED35_RS08555 PF01769 Divalent cation transporter BED35_RS08560 PF00768 D-alanyl-D-alanine carboxypeptidase BED35_RS08565 PF01565 FAD binding domain BED35_RS08565 PF09330 D-lactate dehydrogenase, membrane binding BED35_RS08570 PF01928 CYTH domain BED35_RS08575 PF01844 HNH endonuclease BED35_RS08580 PF05076 Suppressor of fused protein (SUFU) BED35_RS08585 PF04226 BED35_RS08585 BED35_RS08590 PF00005 ABC transporter BED35_RS08595 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein BED35_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS08605 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS08610 PF07308 BED35_RS08610 BED35_RS08615 PF13433 Periplasmic binding protein domain BED35_RS08620 PF02653 BED35_RS08620 BED35_RS08620 PF13646 HEAT repeats BED35_RS08625 PF02653 BED35_RS08625 BED35_RS08630 PF00005 ABC transporter BED35_RS08630 PF12399 Branched-chain amino acid ATP-binding cassette transporter BED35_RS08635 PF00005 ABC transporter BED35_RS08640 PF00581 Rhodanese-like domain BED35_RS08650 PF00487 BED35_RS08650 BED35_RS08655 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BED35_RS08665 PF00005 ABC transporter BED35_RS08670 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS08675 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein BED35_RS08680 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS08685 PF03466 LysR substrate binding domain BED35_RS08695 PF00892 EamA-like transporter family BED35_RS08700 PF05426 Alginate lyase BED35_RS08705 PF00267 Gram-negative porin BED35_RS08710 PF00270 DEAD/DEAH box helicase BED35_RS08710 PF06733 DEAD_2 BED35_RS08710 PF13307 Helicase C-terminal domain BED35_RS08715 PF00230 Major intrinsic protein BED35_RS08720 PF02885 Glycosyl transferase family, helical bundle domain BED35_RS08730 PF07338 Protein of unknown function (DUF1471) BED35_RS08735 PF01613 Flavin reductase like domain BED35_RS08740 PF05971 Protein of unknown function (DUF890) BED35_RS08745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS08745 PF08447 PAS fold BED35_RS08750 PF00005 ABC transporter BED35_RS08755 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS08760 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS08765 PF01258 Prokaryotic dksA/traR C4-type zinc finger BED35_RS08770 PF00210 Ferritin-like domain BED35_RS08775 PF13847 Methyltransferase domain BED35_RS08780 PF10099 BED35_RS08780 BED35_RS08785 PF04542 Sigma-70 region 2 BED35_RS08785 PF08281 Sigma-70, region 4 BED35_RS08790 PF02469 Fasciclin domain BED35_RS08795 PF00583 Acetyltransferase (GNAT) family BED35_RS08800 PF00892 EamA-like transporter family BED35_RS08810 PF13505 Outer membrane protein beta-barrel domain BED35_RS08815 PF12697 Alpha/beta hydrolase family BED35_RS08820 PF01545 Cation efflux family BED35_RS08830 PF00005 ABC transporter BED35_RS08830 PF12848 ABC transporter BED35_RS08835 PF01548 BED35_RS08835 BED35_RS08835 PF02371 BED35_RS08835 BED35_RS08840 PF00899 ThiF family BED35_RS08845 PF00994 Probable molybdopterin binding domain BED35_RS08845 PF03453 MoeA N-terminal region (domain I and II) BED35_RS08845 PF03454 MoeA C-terminal region (domain IV) BED35_RS08850 PF06041 Bacterial protein of unknown function (DUF924) BED35_RS08855 PF04055 Radical SAM superfamily BED35_RS08860 PF00005 ABC transporter BED35_RS08865 PF13437 HlyD family secretion protein BED35_RS08880 PF00756 Putative esterase BED35_RS08885 PF00107 Zinc-binding dehydrogenase BED35_RS08885 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS08890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS08890 PF03466 LysR substrate binding domain BED35_RS08895 PF06779 BED35_RS08895 BED35_RS08900 PF01227 GTP cyclohydrolase I BED35_RS08905 PF04235 BED35_RS08905 BED35_RS08910 PF00356 Bacterial regulatory proteins, lacI family BED35_RS08910 PF13377 Periplasmic binding protein-like domain BED35_RS08915 PF13407 Periplasmic binding protein domain BED35_RS08920 PF00005 ABC transporter BED35_RS08925 PF02653 BED35_RS08925 BED35_RS08930 PF00158 Sigma-54 interaction domain BED35_RS08930 PF01590 GAF domain BED35_RS08940 PF00037 4Fe-4S binding domain BED35_RS08940 PF12798 4Fe-4S binding domain BED35_RS08940 PF12800 4Fe-4S binding domain BED35_RS08945 PF01750 Hydrogenase maturation protease BED35_RS08950 PF07450 BED35_RS08950 BED35_RS08955 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BED35_RS08960 PF12838 4Fe-4S dicluster domain BED35_RS08965 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BED35_RS08965 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BED35_RS08965 PF00374 Nickel-dependent hydrogenase BED35_RS08970 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BED35_RS08970 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BED35_RS08975 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BED35_RS08980 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BED35_RS08980 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BED35_RS08985 PF00146 NADH dehydrogenase BED35_RS08990 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BED35_RS08995 PF00037 4Fe-4S binding domain BED35_RS08995 PF12798 4Fe-4S binding domain BED35_RS09000 PF01155 Hydrogenase expression/synthesis hypA family BED35_RS09005 PF01455 HupF/HypC family BED35_RS09010 PF02698 DUF218 domain BED35_RS09015 PF00390 Malic enzyme, N-terminal domain BED35_RS09015 PF03949 Malic enzyme, NAD binding domain BED35_RS09025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BED35_RS09025 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BED35_RS09030 PF04172 BED35_RS09030 BED35_RS09035 PF03788 BED35_RS09035 BED35_RS09040 PF07690 Major Facilitator Superfamily BED35_RS09045 PF08309 BED35_RS09045 BED35_RS09050 PF13407 Periplasmic binding protein domain BED35_RS09060 PF01588 Putative tRNA binding domain BED35_RS09060 PF09334 tRNA synthetases class I (M) BED35_RS09065 PF10609 ParA/MinD ATPase like BED35_RS09070 PF00485 Phosphoribulokinase / Uridine kinase family BED35_RS09075 PF00692 dUTPase BED35_RS09080 PF05170 BED35_RS09080 BED35_RS09080 PF13502 BED35_RS09080 BED35_RS09085 PF03606 BED35_RS09085 BED35_RS09090 PF00571 CBS domain BED35_RS09090 PF03471 Transporter associated domain BED35_RS09090 PF03741 BED35_RS09090 BED35_RS09095 PF05598 BED35_RS09095 BED35_RS09095 PF13751 BED35_RS09095 BED35_RS09100 PF00483 Nucleotidyl transferase BED35_RS09105 PF00535 Glycosyl transferase family 2 BED35_RS09110 PF00535 Glycosyl transferase family 2 BED35_RS09115 PF01061 BED35_RS09115 BED35_RS09120 PF00005 ABC transporter BED35_RS09125 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BED35_RS09130 PF04321 RmlD substrate binding domain BED35_RS09135 PF13692 Glycosyl transferases group 1 BED35_RS09150 PF00872 BED35_RS09150 BED35_RS09175 PF00483 Nucleotidyl transferase BED35_RS09180 PF00483 Nucleotidyl transferase BED35_RS09185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BED35_RS09185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BED35_RS09190 PF01502 Phosphoribosyl-AMP cyclohydrolase BED35_RS09190 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BED35_RS09195 PF00977 Histidine biosynthesis protein BED35_RS09200 PF00977 Histidine biosynthesis protein BED35_RS09205 PF00117 Glutamine amidotransferase class-I BED35_RS09210 PF00475 Imidazoleglycerol-phosphate dehydratase BED35_RS09210 PF08645 Polynucleotide kinase 3 phosphatase BED35_RS09215 PF00155 Aminotransferase class I and II BED35_RS09220 PF00815 Histidinol dehydrogenase BED35_RS09225 PF01634 ATP phosphoribosyltransferase BED35_RS09225 PF08029 HisG, C-terminal domain BED35_RS09230 PF01370 NAD dependent epimerase/dehydratase family BED35_RS09235 PF02653 BED35_RS09235 BED35_RS09240 PF00005 ABC transporter BED35_RS09245 PF00465 Iron-containing alcohol dehydrogenase BED35_RS09255 PF13520 Amino acid permease BED35_RS09260 PF00929 Exonuclease BED35_RS09260 PF08411 Exonuclease C-terminal BED35_RS09265 PF07993 Male sterility protein BED35_RS09270 PF13515 BED35_RS09270 BED35_RS09275 PF04363 BED35_RS09275 BED35_RS09280 PF02653 BED35_RS09280 BED35_RS09285 PF02653 BED35_RS09285 BED35_RS09290 PF00005 ABC transporter BED35_RS09295 PF13407 Periplasmic binding protein domain BED35_RS09300 PF00288 GHMP kinases N terminal domain BED35_RS09305 PF00155 Aminotransferase class I and II BED35_RS09310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS09315 PF00871 Acetokinase family BED35_RS09320 PF10662 Ethanolamine utilisation - propanediol utilisation BED35_RS09325 PF00936 BMC domain BED35_RS09330 PF00936 BMC domain BED35_RS09335 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BED35_RS09335 PF10531 SLBB domain BED35_RS09335 PF13375 RnfC Barrel sandwich hybrid domain BED35_RS09335 PF13534 4Fe-4S dicluster domain BED35_RS09340 PF00465 Iron-containing alcohol dehydrogenase BED35_RS09345 PF00171 Aldehyde dehydrogenase family BED35_RS09350 PF01923 Cobalamin adenosyltransferase BED35_RS09350 PF03928 Domain of unknown function (DUF336) BED35_RS09355 PF03319 Ethanolamine utilisation protein EutN/carboxysome BED35_RS09360 PF15953 BED35_RS09360 BED35_RS09365 PF06130 BED35_RS09365 BED35_RS09370 PF00936 BMC domain BED35_RS09375 PF00936 BMC domain BED35_RS09380 PF02288 Dehydratase medium subunit BED35_RS09385 PF08841 Diol dehydratase reactivase ATPase-like domain BED35_RS09390 PF02287 Dehydratase small subunit BED35_RS09395 PF02288 Dehydratase medium subunit BED35_RS09400 PF02286 Dehydratase large subunit BED35_RS09405 PF00936 BMC domain BED35_RS09410 PF00936 BMC domain BED35_RS09415 PF00230 Major intrinsic protein BED35_RS09420 PF10114 BED35_RS09420 BED35_RS09420 PF12833 Helix-turn-helix domain BED35_RS09425 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BED35_RS09425 PF07685 CobB/CobQ-like glutamine amidotransferase domain BED35_RS09435 PF02570 Precorrin-8X methylmutase BED35_RS09440 PF01888 CbiD BED35_RS09445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS09450 PF13847 Methyltransferase domain BED35_RS09455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS09460 PF01890 Cobalamin synthesis G C-terminus BED35_RS09460 PF11760 Cobalamin synthesis G N-terminal BED35_RS09460 PF11761 BED35_RS09460 BED35_RS09465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS09470 PF02571 BED35_RS09470 BED35_RS09475 PF06180 Cobalt chelatase (CbiK) BED35_RS09480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED35_RS09485 PF01891 Cobalt uptake substrate-specific transmembrane region BED35_RS09490 PF02553 BED35_RS09490 BED35_RS09495 PF02361 Cobalt transport protein BED35_RS09500 PF00005 ABC transporter BED35_RS09505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BED35_RS09505 PF07685 CobB/CobQ-like glutamine amidotransferase domain BED35_RS09515 PF02654 BED35_RS09515 BED35_RS09520 PF00300 Histidine phosphatase superfamily (branch 1) BED35_RS09525 PF02277 Phosphoribosyltransferase BED35_RS09540 PF00196 Bacterial regulatory proteins, luxR family BED35_RS09545 PF08786 Domain of unknown function (DUF1795) BED35_RS09550 PF00691 OmpA family BED35_RS09565 PF06744 BED35_RS09565 BED35_RS09565 PF06761 BED35_RS09565 BED35_RS09565 PF14331 BED35_RS09565 BED35_RS09570 PF05954 Phage late control gene D protein (GPD) BED35_RS09575 PF05488 PAAR motif BED35_RS09585 PF07024 ImpE protein BED35_RS09590 PF04965 Gene 25-like lysozyme BED35_RS09595 PF00764 Arginosuccinate synthase BED35_RS09600 PF01554 MatE BED35_RS09615 PF08282 haloacid dehalogenase-like hydrolase BED35_RS09620 PF00455 BED35_RS09620 BED35_RS09620 PF08220 DeoR-like helix-turn-helix domain BED35_RS09625 PF00144 Beta-lactamase BED35_RS09630 PF00072 Response regulator receiver domain BED35_RS09630 PF01584 CheW-like domain BED35_RS09635 PF00440 Bacterial regulatory proteins, tetR family BED35_RS09640 PF00155 Aminotransferase class I and II BED35_RS09640 PF00392 Bacterial regulatory proteins, gntR family BED35_RS09645 PF00583 Acetyltransferase (GNAT) family BED35_RS09650 PF02558 Ketopantoate reductase PanE/ApbA BED35_RS09650 PF08546 Ketopantoate reductase PanE/ApbA C terminal BED35_RS09660 PF00005 ABC transporter BED35_RS09660 PF08402 TOBE domain BED35_RS09665 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS09670 PF13343 Bacterial extracellular solute-binding protein BED35_RS09675 PF07690 Major Facilitator Superfamily BED35_RS09680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS09680 PF05231 BED35_RS09680 BED35_RS09680 PF07730 Histidine kinase BED35_RS09685 PF00072 Response regulator receiver domain BED35_RS09685 PF00196 Bacterial regulatory proteins, luxR family BED35_RS09690 PF00072 Response regulator receiver domain BED35_RS09690 PF12431 BED35_RS09690 BED35_RS09695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS09705 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BED35_RS09705 PF17203 BED35_RS09705 BED35_RS09710 PF08218 Citrate lyase ligase C-terminal domain BED35_RS09715 PF06857 BED35_RS09715 BED35_RS09720 PF03328 HpcH/HpaI aldolase/citrate lyase family BED35_RS09725 PF04223 Citrate lyase, alpha subunit (CitF) BED35_RS09730 PF03802 BED35_RS09730 BED35_RS09735 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BED35_RS09740 PF00939 Sodium:sulfate symporter transmembrane region BED35_RS09750 PF04290 BED35_RS09750 BED35_RS09755 PF03480 Bacterial extracellular solute-binding protein, family 7 BED35_RS09765 PF01648 4'-phosphopantetheinyl transferase superfamily BED35_RS09770 PF05118 Aspartyl/Asparaginyl beta-hydroxylase BED35_RS09775 PF00083 Sugar (and other) transporter BED35_RS09780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED35_RS09785 PF09831 BED35_RS09785 BED35_RS09790 PF00849 RNA pseudouridylate synthase BED35_RS09805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS09805 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS09810 PF00419 Fimbrial protein BED35_RS09815 PF00577 Outer membrane usher protein BED35_RS09815 PF13953 PapC C-terminal domain BED35_RS09815 PF13954 PapC N-terminal domain BED35_RS09820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS09820 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS09825 PF00419 Fimbrial protein BED35_RS09835 PF00072 Response regulator receiver domain BED35_RS09835 PF00196 Bacterial regulatory proteins, luxR family BED35_RS09845 PF06167 Glucose-regulated metallo-peptidase M90 BED35_RS09855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED35_RS09855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED35_RS09860 PF06551 BED35_RS09860 BED35_RS09865 PF06551 BED35_RS09865 BED35_RS09880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS09885 PF01548 BED35_RS09885 BED35_RS09885 PF02371 BED35_RS09885 BED35_RS09890 PF00483 Nucleotidyl transferase BED35_RS09900 PF14001 BED35_RS09900 BED35_RS09910 PF01037 AsnC family BED35_RS09910 PF13412 Winged helix-turn-helix DNA-binding BED35_RS09915 PF10777 BED35_RS09915 BED35_RS09920 PF00107 Zinc-binding dehydrogenase BED35_RS09920 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS09925 PF00872 BED35_RS09925 BED35_RS09930 PF00703 Glycosyl hydrolases family 2 BED35_RS09930 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BED35_RS09930 PF02837 Glycosyl hydrolases family 2, sugar binding domain BED35_RS09930 PF02929 Beta galactosidase small chain BED35_RS09930 PF16353 BED35_RS09930 BED35_RS09935 PF00356 Bacterial regulatory proteins, lacI family BED35_RS09935 PF13377 Periplasmic binding protein-like domain BED35_RS09940 PF00313 'Cold-shock' DNA-binding domain BED35_RS09945 PF10781 BED35_RS09945 BED35_RS09950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS09950 PF00672 HAMP domain BED35_RS09950 PF02203 Tar ligand binding domain homologue BED35_RS09965 PF02308 BED35_RS09965 BED35_RS09970 PF00122 E1-E2 ATPase BED35_RS09970 PF00689 Cation transporting ATPase, C-terminus BED35_RS09970 PF00690 Cation transporter/ATPase, N-terminus BED35_RS09970 PF00702 haloacid dehalogenase-like hydrolase BED35_RS09975 PF00107 Zinc-binding dehydrogenase BED35_RS09975 PF16884 BED35_RS09975 BED35_RS09980 PF00582 Universal stress protein family BED35_RS09985 PF05247 Flagellar transcriptional activator (FlhD) BED35_RS09990 PF05280 Flagellar transcriptional activator (FlhC) BED35_RS09995 PF01618 BED35_RS09995 BED35_RS10000 PF00691 OmpA family BED35_RS10000 PF13677 BED35_RS10000 BED35_RS10005 PF01584 CheW-like domain BED35_RS10005 PF01627 Hpt domain BED35_RS10005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS10005 PF02895 Signal transducing histidine kinase, homodimeric domain BED35_RS10005 PF09078 CheY binding BED35_RS10010 PF01584 CheW-like domain BED35_RS10015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS10015 PF00672 HAMP domain BED35_RS10015 PF02203 Tar ligand binding domain homologue BED35_RS10020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS10020 PF00672 HAMP domain BED35_RS10020 PF02203 Tar ligand binding domain homologue BED35_RS10025 PF01739 CheR methyltransferase, SAM binding domain BED35_RS10025 PF03705 CheR methyltransferase, all-alpha domain BED35_RS10030 PF00072 Response regulator receiver domain BED35_RS10030 PF01339 CheB methylesterase BED35_RS10035 PF00072 Response regulator receiver domain BED35_RS10040 PF04344 Chemotaxis phosphatase, CheZ BED35_RS10045 PF00082 Subtilase family BED35_RS10050 PF01312 FlhB HrpN YscU SpaS Family BED35_RS10055 PF00771 FHIPEP family BED35_RS10060 PF06366 BED35_RS10060 BED35_RS10070 PF05130 FlgN protein BED35_RS10075 PF04316 Anti-sigma-28 factor, FlgM BED35_RS10080 PF13144 SAF-like BED35_RS10085 PF00460 Flagella basal body rod protein BED35_RS10090 PF00460 Flagella basal body rod protein BED35_RS10090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS10095 PF03963 BED35_RS10095 BED35_RS10095 PF13860 FlgD Ig-like domain BED35_RS10095 PF13861 FlgD Tudor-like domain BED35_RS10100 PF00460 Flagella basal body rod protein BED35_RS10100 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS10100 PF07559 Flagellar basal body protein FlaE BED35_RS10105 PF00460 Flagella basal body rod protein BED35_RS10105 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS10110 PF00460 Flagella basal body rod protein BED35_RS10110 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS10115 PF02107 BED35_RS10115 BED35_RS10120 PF02119 BED35_RS10120 BED35_RS10125 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BED35_RS10125 PF10135 BED35_RS10125 BED35_RS10130 PF00460 Flagella basal body rod protein BED35_RS10130 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED35_RS10135 PF00669 Bacterial flagellin N-terminal helical region BED35_RS10140 PF01311 BED35_RS10140 BED35_RS10145 PF01313 BED35_RS10145 BED35_RS10150 PF00813 BED35_RS10150 BED35_RS10155 PF04347 BED35_RS10155 BED35_RS10160 PF01052 Surface presentation of antigens (SPOA) BED35_RS10160 PF16973 BED35_RS10160 BED35_RS10165 PF01052 Surface presentation of antigens (SPOA) BED35_RS10165 PF02154 Flagellar motor switch protein FliM BED35_RS10170 PF03748 BED35_RS10170 BED35_RS10175 PF02120 Flagellar hook-length control protein FliK BED35_RS10180 PF02050 Flagellar FliJ protein BED35_RS10185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED35_RS10190 PF02108 BED35_RS10190 BED35_RS10195 PF01706 FliG C-terminal domain BED35_RS10195 PF14841 FliG middle domain BED35_RS10195 PF14842 FliG N-terminal domain BED35_RS10200 PF01514 Secretory protein of YscJ/FliF family BED35_RS10200 PF08345 BED35_RS10200 BED35_RS10205 PF02049 BED35_RS10205 BED35_RS10230 PF00730 HhH-GPD superfamily base excision DNA repair protein BED35_RS10235 PF13487 HD domain BED35_RS10240 PF12833 Helix-turn-helix domain BED35_RS10245 PF05400 Flagellar protein FliT BED35_RS10250 PF02561 Flagellar protein FliS BED35_RS10255 PF02465 BED35_RS10255 BED35_RS10255 PF07195 BED35_RS10255 BED35_RS10255 PF07196 Flagellin hook IN motif BED35_RS10260 PF00669 Bacterial flagellin N-terminal helical region BED35_RS10260 PF00700 Bacterial flagellin C-terminal helical region BED35_RS10265 PF00669 Bacterial flagellin N-terminal helical region BED35_RS10265 PF00700 Bacterial flagellin C-terminal helical region BED35_RS10275 PF04539 Sigma-70 region 3 BED35_RS10275 PF04542 Sigma-70 region 2 BED35_RS10275 PF04545 Sigma-70, region 4 BED35_RS10280 PF02899 Phage integrase, N-terminal SAM-like domain BED35_RS10285 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS10290 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS10300 PF00005 ABC transporter BED35_RS10315 PF00171 Aldehyde dehydrogenase family BED35_RS10315 PF01619 Proline dehydrogenase BED35_RS10315 PF14850 DNA-binding domain of Proline dehydrogenase BED35_RS10320 PF00474 Sodium:solute symporter family BED35_RS10340 PF03239 BED35_RS10340 BED35_RS10345 PF09375 Imelysin BED35_RS10345 PF13473 Cupredoxin-like domain BED35_RS10350 PF04261 Dyp-type peroxidase family BED35_RS10355 PF03358 NADPH-dependent FMN reductase BED35_RS10360 PF01381 Helix-turn-helix BED35_RS10360 PF13239 BED35_RS10360 BED35_RS10365 PF01344 Kelch motif BED35_RS10380 PF01613 Flavin reductase like domain BED35_RS10385 PF00881 Nitroreductase family BED35_RS10390 PF00561 alpha/beta hydrolase fold BED35_RS10395 PF01042 Endoribonuclease L-PSP BED35_RS10400 PF00857 Isochorismatase family BED35_RS10410 PF00440 Bacterial regulatory proteins, tetR family BED35_RS10410 PF08362 YcdC-like protein, C-terminal region BED35_RS10415 PF00324 Amino acid permease BED35_RS10425 PF00589 Phage integrase family BED35_RS10430 PF01527 Transposase BED35_RS10435 PF13683 BED35_RS10435 BED35_RS10440 PF08241 Methyltransferase domain BED35_RS10455 PF00128 Alpha amylase, catalytic domain BED35_RS10460 PF08459 UvrC Helix-hairpin-helix N-terminal BED35_RS10460 PF14520 Helix-hairpin-helix domain BED35_RS10465 PF01066 CDP-alcohol phosphatidyltransferase BED35_RS10485 PF04606 BED35_RS10485 BED35_RS10500 PF05954 Phage late control gene D protein (GPD) BED35_RS10510 PF04865 BED35_RS10510 BED35_RS10520 PF05069 BED35_RS10520 BED35_RS10525 PF06891 BED35_RS10525 BED35_RS10535 PF13539 D-alanyl-D-alanine carboxypeptidase BED35_RS10555 PF05598 BED35_RS10555 BED35_RS10555 PF13751 BED35_RS10555 BED35_RS10565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS10565 PF03466 LysR substrate binding domain BED35_RS10570 PF01381 Helix-turn-helix BED35_RS10575 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS10585 PF06530 BED35_RS10585 BED35_RS10590 PF10753 BED35_RS10590 BED35_RS10595 PF16080 BED35_RS10595 BED35_RS10600 PF00959 Phage lysozyme BED35_RS10605 PF00561 alpha/beta hydrolase fold BED35_RS10610 PF04391 BED35_RS10610 BED35_RS10615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS10615 PF03466 LysR substrate binding domain BED35_RS10620 PF00144 Beta-lactamase BED35_RS10625 PF01926 50S ribosome-binding GTPase BED35_RS10625 PF06071 Protein of unknown function (DUF933) BED35_RS10635 PF01195 Peptidyl-tRNA hydrolase BED35_RS10640 PF10762 BED35_RS10640 BED35_RS10650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BED35_RS10650 PF14572 Phosphoribosyl synthetase-associated domain BED35_RS10655 PF00288 GHMP kinases N terminal domain BED35_RS10655 PF08544 GHMP kinases C terminal BED35_RS10660 PF03550 Outer membrane lipoprotein LolB BED35_RS10665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BED35_RS10665 PF01488 Shikimate / quinate 5-dehydrogenase BED35_RS10665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BED35_RS10670 PF00472 RF-1 domain BED35_RS10670 PF03462 PCRF domain BED35_RS10675 PF13847 Methyltransferase domain BED35_RS10680 PF04247 BED35_RS10680 BED35_RS10685 PF13369 BED35_RS10685 BED35_RS10685 PF13371 Tetratricopeptide repeat BED35_RS10690 PF00793 DAHP synthetase I family BED35_RS10695 PF00916 BED35_RS10695 BED35_RS10695 PF01740 STAS domain BED35_RS10700 PF00990 GGDEF domain BED35_RS10725 PF02811 PHP domain BED35_RS10730 PF02613 Nitrate reductase delta subunit BED35_RS10735 PF07273 Protein of unknown function (DUF1439) BED35_RS10740 PF07690 Major Facilitator Superfamily BED35_RS10750 PF13988 BED35_RS10750 BED35_RS10755 PF13302 Acetyltransferase (GNAT) domain BED35_RS10760 PF04337 Protein of unknown function, DUF480 BED35_RS10765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED35_RS10770 PF03023 BED35_RS10770 BED35_RS10775 PF01699 Sodium/calcium exchanger protein BED35_RS10780 PF04954 Siderophore-interacting protein BED35_RS10780 PF08021 Siderophore-interacting FAD-binding domain BED35_RS10785 PF07690 Major Facilitator Superfamily BED35_RS10790 PF01548 BED35_RS10790 BED35_RS10790 PF02371 BED35_RS10790 BED35_RS10800 PF00672 HAMP domain BED35_RS10800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS10800 PF07730 Histidine kinase BED35_RS10800 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BED35_RS10805 PF02322 BED35_RS10805 BED35_RS10810 PF01654 BED35_RS10810 BED35_RS10815 PF00155 Aminotransferase class I and II BED35_RS10815 PF00392 Bacterial regulatory proteins, gntR family BED35_RS10820 PF00202 Aminotransferase class-III BED35_RS10825 PF04958 Arginine N-succinyltransferase beta subunit BED35_RS10830 PF00171 Aldehyde dehydrogenase family BED35_RS10835 PF04996 Succinylarginine dihydrolase BED35_RS10840 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BED35_RS10845 PF01548 BED35_RS10845 BED35_RS10845 PF02371 BED35_RS10845 BED35_RS10850 PF00267 Gram-negative porin BED35_RS10855 PF00665 Integrase core domain BED35_RS10860 PF13518 Helix-turn-helix domain BED35_RS10865 PF05013 N-formylglutamate amidohydrolase BED35_RS10870 PF01979 Amidohydrolase family BED35_RS10875 PF00392 Bacterial regulatory proteins, gntR family BED35_RS10875 PF07702 UTRA domain BED35_RS10880 PF01979 Amidohydrolase family BED35_RS10900 PF03797 Autotransporter beta-domain BED35_RS10905 PF02502 Ribose/Galactose Isomerase BED35_RS10905 PF12408 Ribose-5-phosphate isomerase BED35_RS10910 PF01476 LysM domain BED35_RS10910 PF01551 Peptidase family M23 BED35_RS10915 PF01116 Fructose-bisphosphate aldolase class-II BED35_RS10920 PF01380 SIS domain BED35_RS10925 PF03610 PTS system fructose IIA component BED35_RS10930 PF03613 BED35_RS10930 BED35_RS10940 PF03830 PTS system sorbose subfamily IIB component BED35_RS10945 PF08013 Tagatose 6 phosphate kinase BED35_RS10950 PF00455 BED35_RS10950 BED35_RS10950 PF08220 DeoR-like helix-turn-helix domain BED35_RS10960 PF01548 BED35_RS10960 BED35_RS10960 PF02371 BED35_RS10960 BED35_RS10965 PF06551 BED35_RS10965 BED35_RS10970 PF00849 RNA pseudouridylate synthase BED35_RS10970 PF01479 S4 domain BED35_RS10975 PF03616 BED35_RS10975 BED35_RS10985 PF01548 BED35_RS10985 BED35_RS10990 PF02371 BED35_RS10990 BED35_RS10995 PF08003 Protein of unknown function (DUF1698) BED35_RS11000 PF13649 Methyltransferase domain BED35_RS11005 PF01124 MAPEG family BED35_RS11010 PF01904 Protein of unknown function DUF72 BED35_RS11015 PF00857 Isochorismatase family BED35_RS11020 PF00152 tRNA synthetases class II (D, K and N) BED35_RS11020 PF01336 OB-fold nucleic acid binding domain BED35_RS11020 PF02938 GAD domain BED35_RS11025 PF00293 NUDIX domain BED35_RS11030 PF01709 Transcriptional regulator BED35_RS11035 PF02075 Crossover junction endodeoxyribonuclease RuvC BED35_RS11040 PF01330 RuvA N terminal domain BED35_RS11040 PF07499 RuvA, C-terminal domain BED35_RS11040 PF14520 Helix-hairpin-helix domain BED35_RS11045 PF05491 Holliday junction DNA helicase ruvB C-terminus BED35_RS11045 PF05496 Holliday junction DNA helicase ruvB N-terminus BED35_RS11050 PF00854 POT family BED35_RS11055 PF00950 BED35_RS11055 BED35_RS11060 PF00005 ABC transporter BED35_RS11065 PF01297 Periplasmic solute binding protein family BED35_RS11070 PF01551 Peptidase family M23 BED35_RS11070 PF04225 Opacity-associated protein A LysM-like domain BED35_RS11070 PF08525 BED35_RS11070 BED35_RS11075 PF03279 BED35_RS11075 BED35_RS11090 PF00224 Pyruvate kinase, barrel domain BED35_RS11090 PF02887 Pyruvate kinase, alpha/beta domain BED35_RS11095 PF01380 SIS domain BED35_RS11095 PF01418 Helix-turn-helix domain, rpiR family BED35_RS11100 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BED35_RS11100 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BED35_RS11105 PF01081 KDPG and KHG aldolase BED35_RS11110 PF00893 Small Multidrug Resistance protein BED35_RS11115 PF00893 Small Multidrug Resistance protein BED35_RS11120 PF01042 Endoribonuclease L-PSP BED35_RS11125 PF00270 DEAD/DEAH box helicase BED35_RS11125 PF06733 DEAD_2 BED35_RS11125 PF13307 Helicase C-terminal domain BED35_RS11130 PF00814 Glycoprotease family BED35_RS11140 PF00501 AMP-binding enzyme BED35_RS11140 PF13193 AMP-binding enzyme C-terminal domain BED35_RS11145 PF00570 HRDC domain BED35_RS11145 PF01612 3'-5' exonuclease BED35_RS11150 PF03776 Septum formation topological specificity factor MinE BED35_RS11155 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BED35_RS11160 PF03775 Septum formation inhibitor MinC, C-terminal domain BED35_RS11160 PF05209 Septum formation inhibitor MinC, N-terminal domain BED35_RS11170 PF05166 YcgL domain BED35_RS11175 PF13406 Transglycosylase SLT domain BED35_RS11180 PF01557 Fumarylacetoacetate (FAA) hydrolase family BED35_RS11185 PF03692 BED35_RS11185 BED35_RS11200 PF00892 EamA-like transporter family BED35_RS11210 PF00924 Mechanosensitive ion channel BED35_RS11215 PF13417 Glutathione S-transferase, N-terminal domain BED35_RS11215 PF14834 Glutathione S-transferase, C-terminal domain BED35_RS11220 PF13302 Acetyltransferase (GNAT) domain BED35_RS11230 PF04266 ASCH domain BED35_RS11235 PF07351 BED35_RS11235 BED35_RS11240 PF00990 GGDEF domain BED35_RS11240 PF08447 PAS fold BED35_RS11245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS11250 PF05229 BED35_RS11250 BED35_RS11255 PF05229 BED35_RS11255 BED35_RS11265 PF07690 Major Facilitator Superfamily BED35_RS11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS11270 PF03466 LysR substrate binding domain BED35_RS11275 PF02470 BED35_RS11275 BED35_RS11280 PF04403 BED35_RS11280 BED35_RS11285 PF13185 GAF domain BED35_RS11290 PF04352 ProQ/FINO family BED35_RS11295 PF00595 PDZ domain (Also known as DHR or GLGF) BED35_RS11295 PF03572 Peptidase family S41 BED35_RS11295 PF11818 BED35_RS11295 BED35_RS11300 PF01435 Peptidase family M48 BED35_RS11315 PF14583 Oligogalacturonate lyase BED35_RS11320 PF01614 Bacterial transcriptional regulator BED35_RS11320 PF09339 IclR helix-turn-helix domain BED35_RS11325 PF01471 Putative peptidoglycan binding domain BED35_RS11325 PF01510 N-acetylmuramoyl-L-alanine amidase BED35_RS11335 PF04307 BED35_RS11335 BED35_RS11345 PF06178 Oligogalacturonate-specific porin protein (KdgM) BED35_RS11350 PF01547 Bacterial extracellular solute-binding protein BED35_RS11355 PF00005 ABC transporter BED35_RS11355 PF08402 TOBE domain BED35_RS11360 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS11365 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS11370 PF06917 Periplasmic pectate lyase BED35_RS11375 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS11380 PF04962 KduI/IolB family BED35_RS11385 PF07883 Cupin domain BED35_RS11390 PF00872 BED35_RS11390 BED35_RS11395 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS11400 PF14002 BED35_RS11400 BED35_RS11405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS11405 PF03466 LysR substrate binding domain BED35_RS11410 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BED35_RS11410 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BED35_RS11415 PF00378 Enoyl-CoA hydratase/isomerase family BED35_RS11420 PF03308 ArgK protein BED35_RS11430 PF03881 Fructosamine kinase BED35_RS11435 PF00950 BED35_RS11435 BED35_RS11440 PF00950 BED35_RS11440 BED35_RS11445 PF00005 ABC transporter BED35_RS11450 PF01297 Periplasmic solute binding protein family BED35_RS11455 PF01464 Transglycosylase SLT domain BED35_RS11460 PF01914 BED35_RS11460 BED35_RS11485 PF04474 BED35_RS11485 BED35_RS11490 PF13619 BED35_RS11490 BED35_RS11495 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BED35_RS11495 PF02824 TGS domain BED35_RS11495 PF03129 Anticodon binding domain BED35_RS11495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BED35_RS11500 PF00707 Translation initiation factor IF-3, C-terminal domain BED35_RS11505 PF01632 Ribosomal protein L35 BED35_RS11510 PF00453 Ribosomal protein L20 BED35_RS11515 PF01409 tRNA synthetases class II core domain (F) BED35_RS11515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BED35_RS11520 PF01588 Putative tRNA binding domain BED35_RS11520 PF03147 Ferredoxin-fold anticodon binding domain BED35_RS11520 PF03483 B3/4 domain BED35_RS11520 PF03484 tRNA synthetase B5 domain BED35_RS11525 PF00216 Bacterial DNA-binding protein BED35_RS11530 PF13358 DDE superfamily endonuclease BED35_RS11530 PF13384 Homeodomain-like domain BED35_RS11535 PF10697 BED35_RS11535 BED35_RS11540 PF01032 FecCD transport family BED35_RS11545 PF00255 Glutathione peroxidase BED35_RS11550 PF00005 ABC transporter BED35_RS11555 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BED35_RS11560 PF00535 Glycosyl transferase family 2 BED35_RS11565 PF00551 Formyl transferase BED35_RS11565 PF01370 NAD dependent epimerase/dehydratase family BED35_RS11565 PF02911 Formyl transferase, C-terminal domain BED35_RS11570 PF01522 Polysaccharide deacetylase BED35_RS11575 PF02366 BED35_RS11575 BED35_RS11580 PF00892 EamA-like transporter family BED35_RS11590 PF00877 NlpC/P60 family BED35_RS11600 PF02696 BED35_RS11600 BED35_RS11615 PF00593 TonB dependent receptor BED35_RS11615 PF07715 TonB-dependent Receptor Plug Domain BED35_RS11620 PF10636 Hemin uptake protein hemP BED35_RS11625 PF00793 DAHP synthetase I family BED35_RS11630 PF03618 BED35_RS11630 BED35_RS11635 PF00391 PEP-utilising enzyme, mobile domain BED35_RS11635 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BED35_RS11635 PF02896 PEP-utilising enzyme, TIM barrel domain BED35_RS11645 PF01594 BED35_RS11645 BED35_RS11650 PF01565 FAD binding domain BED35_RS11650 PF02913 FAD linked oxidases, C-terminal domain BED35_RS11650 PF13183 4Fe-4S dicluster domain BED35_RS11655 PF03061 Thioesterase superfamily BED35_RS11660 PF01521 Iron-sulphur cluster biosynthesis BED35_RS11665 PF01458 Uncharacterized protein family (UPF0051) BED35_RS11670 PF00005 ABC transporter BED35_RS11675 PF01458 Uncharacterized protein family (UPF0051) BED35_RS11680 PF00266 Aminotransferase class-V BED35_RS11685 PF02657 Fe-S metabolism associated domain BED35_RS11690 PF03734 L,D-transpeptidase catalytic domain BED35_RS11695 PF04728 Lipoprotein leucine-zipper BED35_RS11700 PF00224 Pyruvate kinase, barrel domain BED35_RS11700 PF02887 Pyruvate kinase, alpha/beta domain BED35_RS11720 PF00677 Lumazine binding domain BED35_RS11725 PF02353 Mycolic acid cyclopropane synthetase BED35_RS11730 PF07690 Major Facilitator Superfamily BED35_RS11735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS11735 PF03466 LysR substrate binding domain BED35_RS11740 PF00356 Bacterial regulatory proteins, lacI family BED35_RS11740 PF13377 Periplasmic binding protein-like domain BED35_RS11745 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BED35_RS11745 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BED35_RS11750 PF00877 NlpC/P60 family BED35_RS11755 PF00462 Glutaredoxin BED35_RS11760 PF00929 Exonuclease BED35_RS11765 PF05598 BED35_RS11765 BED35_RS11765 PF13751 BED35_RS11765 BED35_RS11770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BED35_RS11780 PF00440 Bacterial regulatory proteins, tetR family BED35_RS11780 PF16925 BED35_RS11780 BED35_RS11785 PF00884 Sulfatase BED35_RS11785 PF08019 BED35_RS11785 BED35_RS11790 PF06945 BED35_RS11790 BED35_RS11795 PF00248 Aldo/keto reductase family BED35_RS11800 PF04632 BED35_RS11800 BED35_RS11805 PF13437 HlyD family secretion protein BED35_RS11805 PF13533 Biotin-lipoyl like BED35_RS11810 PF07869 BED35_RS11810 BED35_RS11815 PF01047 MarR family BED35_RS11820 PF05433 BED35_RS11820 BED35_RS11825 PF03702 Uncharacterised protein family (UPF0075) BED35_RS11830 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BED35_RS11835 PF01243 Pyridoxamine 5'-phosphate oxidase BED35_RS11835 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BED35_RS11840 PF00579 tRNA synthetases class I (W and Y) BED35_RS11840 PF01479 S4 domain BED35_RS11850 PF00043 Glutathione S-transferase, C-terminal domain BED35_RS11850 PF02798 Glutathione S-transferase, N-terminal domain BED35_RS11855 PF11656 BED35_RS11855 BED35_RS11860 PF06930 BED35_RS11860 BED35_RS11865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BED35_RS11870 PF01548 BED35_RS11870 BED35_RS11870 PF02371 BED35_RS11870 BED35_RS11875 PF00854 POT family BED35_RS11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS11880 PF03466 LysR substrate binding domain BED35_RS11895 PF00005 ABC transporter BED35_RS11900 PF00005 ABC transporter BED35_RS11900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED35_RS11905 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS11905 PF12911 BED35_RS11905 BED35_RS11910 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS11915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS11930 PF00158 Sigma-54 interaction domain BED35_RS11930 PF02954 Bacterial regulatory protein, Fis family BED35_RS11935 PF04012 BED35_RS11935 BED35_RS11940 PF06667 BED35_RS11940 BED35_RS11945 PF04024 BED35_RS11945 BED35_RS11950 PF09584 BED35_RS11950 BED35_RS11955 PF04317 BED35_RS11955 BED35_RS11960 PF05128 BED35_RS11960 BED35_RS11965 PF08808 BED35_RS11965 BED35_RS11970 PF09722 BED35_RS11970 BED35_RS11975 PF00158 Sigma-54 interaction domain BED35_RS11975 PF00989 PAS fold BED35_RS11980 PF08534 Redoxin BED35_RS11985 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BED35_RS11985 PF13378 Enolase C-terminal domain-like BED35_RS11990 PF00246 Zinc carboxypeptidase BED35_RS11995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS12000 PF01544 CorA-like Mg2+ transporter protein BED35_RS12005 PF01171 PP-loop family BED35_RS12010 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BED35_RS12020 PF00893 Small Multidrug Resistance protein BED35_RS12025 PF02308 BED35_RS12025 BED35_RS12030 PF03891 BED35_RS12030 BED35_RS12035 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_RS12035 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED35_RS12040 PF11739 BED35_RS12040 BED35_RS12045 PF13617 BED35_RS12045 BED35_RS12050 PF07027 BED35_RS12050 BED35_RS12055 PF02525 Flavodoxin-like fold BED35_RS12060 PF00270 DEAD/DEAH box helicase BED35_RS12060 PF00271 Helicase conserved C-terminal domain BED35_RS12060 PF04408 Helicase associated domain (HA2) BED35_RS12060 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BED35_RS12060 PF11898 BED35_RS12060 BED35_RS12065 PF05973 BED35_RS12065 BED35_RS12070 PF01381 Helix-turn-helix BED35_RS12075 PF00089 Trypsin BED35_RS12085 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BED35_RS12090 PF00672 HAMP domain BED35_RS12090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS12095 PF00072 Response regulator receiver domain BED35_RS12095 PF00486 Transcriptional regulatory protein, C terminal BED35_RS12105 PF13520 Amino acid permease BED35_RS12110 PF07338 Protein of unknown function (DUF1471) BED35_RS12120 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BED35_RS12120 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BED35_RS12120 PF12769 Domain of unknown function (DUF3814) BED35_RS12125 PF02233 NAD(P) transhydrogenase beta subunit BED35_RS12130 PF00582 Universal stress protein family BED35_RS12135 PF00027 Cyclic nucleotide-binding domain BED35_RS12135 PF13545 Crp-like helix-turn-helix domain BED35_RS12140 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BED35_RS12140 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BED35_RS12145 PF05013 N-formylglutamate amidohydrolase BED35_RS12150 PF04463 BED35_RS12150 BED35_RS12155 PF06445 GyrI-like small molecule binding domain BED35_RS12160 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS12170 PF00294 pfkB family carbohydrate kinase BED35_RS12175 PF00872 BED35_RS12175 BED35_RS12180 PF13208 BED35_RS12180 BED35_RS12180 PF15615 BED35_RS12180 BED35_RS12185 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS12190 PF13710 ACT domain BED35_RS12195 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS12195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS12195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS12200 PF07313 Protein of unknown function (DUF1460) BED35_RS12205 PF01510 N-acetylmuramoyl-L-alanine amidase BED35_RS12215 PF07520 BED35_RS12215 BED35_RS12225 PF01061 BED35_RS12225 BED35_RS12230 PF02798 Glutathione S-transferase, N-terminal domain BED35_RS12230 PF13410 Glutathione S-transferase, C-terminal domain BED35_RS12235 PF13449 Esterase-like activity of phytase BED35_RS12240 PF00106 short chain dehydrogenase BED35_RS12245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS12250 PF07690 Major Facilitator Superfamily BED35_RS12255 PF13396 BED35_RS12255 BED35_RS12260 PF13354 Beta-lactamase enzyme family BED35_RS12265 PF05472 DNA replication terminus site-binding protein (Ter protein) BED35_RS12270 PF00196 Bacterial regulatory proteins, luxR family BED35_RS12270 PF08448 PAS fold BED35_RS12275 PF00206 Lyase BED35_RS12275 PF10415 Fumarase C C-terminus BED35_RS12280 PF01238 Phosphomannose isomerase type I BED35_RS12285 PF06097 BED35_RS12285 BED35_RS12295 PF00356 Bacterial regulatory proteins, lacI family BED35_RS12295 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS12300 PF00367 phosphotransferase system, EIIB BED35_RS12300 PF02378 Phosphotransferase system, EIIC BED35_RS12305 PF00155 Aminotransferase class I and II BED35_RS12310 PF00962 Adenosine/AMP deaminase BED35_RS12315 PF13593 SBF-like CPA transporter family (DUF4137) BED35_RS12320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED35_RS12320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BED35_RS12325 PF02311 AraC-like ligand binding domain BED35_RS12325 PF12833 Helix-turn-helix domain BED35_RS12335 PF00005 ABC transporter BED35_RS12340 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS12345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED35_RS12345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED35_RS12350 PF02610 L-arabinose isomerase BED35_RS12350 PF11762 L-arabinose isomerase C-terminal domain BED35_RS12360 PF13175 AAA ATPase domain BED35_RS12360 PF13304 AAA domain BED35_RS12370 PF13437 HlyD family secretion protein BED35_RS12370 PF13533 Biotin-lipoyl like BED35_RS12385 PF10754 BED35_RS12385 BED35_RS12390 PF02508 BED35_RS12390 BED35_RS12395 PF04060 Putative Fe-S cluster BED35_RS12395 PF14697 4Fe-4S dicluster domain BED35_RS12400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BED35_RS12400 PF10531 SLBB domain BED35_RS12400 PF13237 4Fe-4S dicluster domain BED35_RS12400 PF13375 RnfC Barrel sandwich hybrid domain BED35_RS12410 PF06445 GyrI-like small molecule binding domain BED35_RS12410 PF12833 Helix-turn-helix domain BED35_RS12415 PF03116 BED35_RS12415 BED35_RS12420 PF04205 FMN-binding domain BED35_RS12425 PF02508 BED35_RS12425 BED35_RS12430 PF00633 Helix-hairpin-helix motif BED35_RS12430 PF00730 HhH-GPD superfamily base excision DNA repair protein BED35_RS12430 PF10576 Iron-sulfur binding domain of endonuclease III BED35_RS12505 PF00293 NUDIX domain BED35_RS12505 PF09979 BED35_RS12505 BED35_RS12515 PF06381 BED35_RS12515 BED35_RS12520 PF03237 Terminase-like family BED35_RS12530 PF03245 BED35_RS12530 BED35_RS12535 PF00959 Phage lysozyme BED35_RS12560 PF05766 BED35_RS12560 BED35_RS12570 PF05772 NinB protein BED35_RS12580 PF04448 BED35_RS12580 BED35_RS12595 PF01695 IstB-like ATP binding protein BED35_RS12600 PF04492 BED35_RS12600 BED35_RS12610 PF05269 Bacteriophage CII protein BED35_RS12615 PF13560 Helix-turn-helix domain BED35_RS12620 PF00717 Peptidase S24-like BED35_RS12620 PF01381 Helix-turn-helix BED35_RS12630 PF08861 BED35_RS12630 BED35_RS12635 PF10965 BED35_RS12635 BED35_RS12675 PF12684 PDDEXK-like domain of unknown function (DUF3799) BED35_RS12680 PF03837 BED35_RS12680 BED35_RS12695 PF00575 S1 RNA binding domain BED35_RS12695 PF00773 RNB domain BED35_RS12695 PF08206 Ribonuclease B OB domain BED35_RS12700 PF02554 BED35_RS12700 BED35_RS12700 PF13722 BED35_RS12700 BED35_RS12705 PF04328 BED35_RS12705 BED35_RS12710 PF00923 Transaldolase BED35_RS12715 PF00455 BED35_RS12715 BED35_RS12715 PF08220 DeoR-like helix-turn-helix domain BED35_RS12720 PF09932 BED35_RS12720 BED35_RS12725 PF00596 Class II Aldolase and Adducin N-terminal domain BED35_RS12730 PF05433 BED35_RS12730 BED35_RS12735 PF01253 Translation initiation factor SUI1 BED35_RS12740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BED35_RS12745 PF07338 Protein of unknown function (DUF1471) BED35_RS12750 PF03594 BED35_RS12750 BED35_RS12755 PF01381 Helix-turn-helix BED35_RS12755 PF07883 Cupin domain BED35_RS12765 PF13176 Tetratricopeptide repeat BED35_RS12765 PF13432 Tetratricopeptide repeat BED35_RS12770 PF06305 BED35_RS12770 BED35_RS12775 PF01569 PAP2 superfamily BED35_RS12780 PF00925 GTP cyclohydrolase II BED35_RS12785 PF00330 Aconitase family (aconitate hydratase) BED35_RS12785 PF00694 Aconitase C-terminal domain BED35_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS12795 PF03466 LysR substrate binding domain BED35_RS12800 PF01131 DNA topoisomerase BED35_RS12800 PF01396 BED35_RS12800 BED35_RS12800 PF01751 Toprim domain BED35_RS12800 PF08272 Topoisomerase I zinc-ribbon-like BED35_RS12805 PF10692 Protein of unknown function (DUF2498) BED35_RS12810 PF01343 Peptidase family S49 BED35_RS12810 PF08496 BED35_RS12810 BED35_RS12815 PF00106 short chain dehydrogenase BED35_RS12820 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BED35_RS12820 PF12557 Cob(I)alamin adenosyltransferase N terminal BED35_RS12830 PF00849 RNA pseudouridylate synthase BED35_RS12830 PF01479 S4 domain BED35_RS12835 PF01300 Telomere recombination BED35_RS12840 PF02811 PHP domain BED35_RS12845 PF00425 chorismate binding enzyme BED35_RS12845 PF04715 Anthranilate synthase component I, N terminal region BED35_RS12850 PF00117 Glutamine amidotransferase class-I BED35_RS12855 PF00591 Glycosyl transferase family, a/b domain BED35_RS12855 PF02885 Glycosyl transferase family, helical bundle domain BED35_RS12860 PF00218 Indole-3-glycerol phosphate synthase BED35_RS12860 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BED35_RS12865 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS12870 PF00290 Tryptophan synthase alpha chain BED35_RS12875 PF04972 BON domain BED35_RS12880 PF03922 OmpW family BED35_RS12885 PF03692 BED35_RS12885 BED35_RS12890 PF06790 BED35_RS12890 BED35_RS12895 PF00916 BED35_RS12895 BED35_RS12895 PF01740 STAS domain BED35_RS12900 PF04279 BED35_RS12900 BED35_RS12905 PF03061 Thioesterase superfamily BED35_RS12910 PF03544 Gram-negative bacterial TonB protein C-terminal BED35_RS12910 PF16031 BED35_RS12910 BED35_RS12915 PF03795 YCII-related domain BED35_RS12925 PF00563 EAL domain BED35_RS12930 PF13091 PLD-like domain BED35_RS12930 PF13396 BED35_RS12930 BED35_RS12935 PF04269 Protein of unknown function, DUF440 BED35_RS12940 PF00005 ABC transporter BED35_RS12940 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED35_RS12945 PF00005 ABC transporter BED35_RS12945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED35_RS12950 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS12950 PF12911 BED35_RS12950 BED35_RS12955 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS12960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS12965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS12970 PF01914 BED35_RS12970 BED35_RS12975 PF00171 Aldehyde dehydrogenase family BED35_RS12975 PF00465 Iron-containing alcohol dehydrogenase BED35_RS12980 PF00265 Thymidine kinase BED35_RS12990 PF00816 H-NS histone family BED35_RS12995 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BED35_RS12995 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BED35_RS12995 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BED35_RS13000 PF00072 Response regulator receiver domain BED35_RS13005 PF01734 Patatin-like phospholipase BED35_RS13015 PF02810 SEC-C motif BED35_RS13020 PF00551 Formyl transferase BED35_RS13020 PF01842 ACT domain BED35_RS13035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS13040 PF03372 Endonuclease/Exonuclease/phosphatase family BED35_RS13045 PF00293 NUDIX domain BED35_RS13050 PF07383 BED35_RS13050 BED35_RS13055 PF01131 DNA topoisomerase BED35_RS13055 PF01751 Toprim domain BED35_RS13060 PF00586 AIR synthase related protein, N-terminal domain BED35_RS13060 PF02769 AIR synthase related protein, C-terminal domain BED35_RS13065 PF00881 Nitroreductase family BED35_RS13070 PF01343 Peptidase family S49 BED35_RS13075 PF00710 Asparaginase BED35_RS13080 PF00857 Isochorismatase family BED35_RS13095 PF01641 SelR domain BED35_RS13100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED35_RS13100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BED35_RS13105 PF01263 Aldose 1-epimerase BED35_RS13110 PF06629 BED35_RS13110 BED35_RS13115 PF06798 BED35_RS13115 BED35_RS13115 PF08298 PrkA AAA domain BED35_RS13120 PF04285 BED35_RS13120 BED35_RS13125 PF00892 EamA-like transporter family BED35_RS13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS13135 PF03466 LysR substrate binding domain BED35_RS13140 PF02678 Pirin BED35_RS13140 PF05726 Pirin C-terminal cupin domain BED35_RS13145 PF00563 EAL domain BED35_RS13145 PF00990 GGDEF domain BED35_RS13145 PF08447 PAS fold BED35_RS13145 PF13185 GAF domain BED35_RS13145 PF13426 PAS domain BED35_RS13155 PF00842 Alanine racemase, C-terminal domain BED35_RS13155 PF01168 Alanine racemase, N-terminal domain BED35_RS13160 PF01266 FAD dependent oxidoreductase BED35_RS13165 PF04293 BED35_RS13165 BED35_RS13170 PF00392 Bacterial regulatory proteins, gntR family BED35_RS13170 PF07840 FadR C-terminal domain BED35_RS13175 PF06450 BED35_RS13175 BED35_RS13180 PF02600 Disulfide bond formation protein DsbB BED35_RS13200 PF03932 CutC family BED35_RS13205 PF06185 YecM protein BED35_RS13210 PF00750 tRNA synthetases class I (R) BED35_RS13210 PF03485 Arginyl tRNA synthetase N terminal domain BED35_RS13210 PF05746 DALR anticodon binding domain BED35_RS13215 PF05598 BED35_RS13215 BED35_RS13215 PF13751 BED35_RS13215 BED35_RS13220 PF02562 PhoH-like protein BED35_RS13230 PF13302 Acetyltransferase (GNAT) domain BED35_RS13235 PF13994 BED35_RS13235 BED35_RS13240 PF00535 Glycosyl transferase family 2 BED35_RS13255 PF00557 Metallopeptidase family M24 BED35_RS13255 PF01321 Creatinase/Prolidase N-terminal domain BED35_RS13260 PF06276 Ferric iron reductase FhuF-like transporter BED35_RS13260 PF11575 BED35_RS13260 BED35_RS13265 PF01411 tRNA synthetases class II (A) BED35_RS13265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BED35_RS13275 PF03848 Tellurite resistance protein TehB BED35_RS13275 PF09313 Domain of unknown function (DUF1971) BED35_RS13280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BED35_RS13285 PF08534 Redoxin BED35_RS13290 PF00005 ABC transporter BED35_RS13300 PF02687 BED35_RS13300 BED35_RS13305 PF04945 YHS domain BED35_RS13305 PF10080 BED35_RS13305 BED35_RS13310 PF10634 Fe2+ transport protein BED35_RS13315 PF03239 BED35_RS13315 BED35_RS13330 PF04960 Glutaminase BED35_RS13335 PF01261 Xylose isomerase-like TIM barrel BED35_RS13340 PF00596 Class II Aldolase and Adducin N-terminal domain BED35_RS13345 PF07005 Protein of unknown function, DUF1537 BED35_RS13345 PF17042 BED35_RS13345 BED35_RS13350 PF00455 BED35_RS13350 BED35_RS13350 PF08220 DeoR-like helix-turn-helix domain BED35_RS13355 PF00989 PAS fold BED35_RS13355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS13355 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BED35_RS13355 PF17203 BED35_RS13355 BED35_RS13360 PF00072 Response regulator receiver domain BED35_RS13365 PF03390 BED35_RS13365 BED35_RS13370 PF00324 Amino acid permease BED35_RS13375 PF04343 BED35_RS13375 BED35_RS13380 PF00480 ROK family BED35_RS13385 PF07690 Major Facilitator Superfamily BED35_RS13390 PF08282 haloacid dehalogenase-like hydrolase BED35_RS13400 PF00872 BED35_RS13400 BED35_RS13405 PF08242 Methyltransferase domain BED35_RS13415 PF00872 BED35_RS13415 BED35_RS13425 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BED35_RS13430 PF08448 PAS fold BED35_RS13445 PF06995 BED35_RS13445 BED35_RS13450 PF05954 Phage late control gene D protein (GPD) BED35_RS13460 PF00589 Phage integrase family BED35_RS13465 PF10709 BED35_RS13465 BED35_RS13470 PF05425 BED35_RS13470 BED35_RS13475 PF04234 CopC domain BED35_RS13480 PF00210 Ferritin-like domain BED35_RS13485 PF06440 DNA polymerase III, theta subunit BED35_RS13490 PF00561 alpha/beta hydrolase fold BED35_RS13495 PF00929 Exonuclease BED35_RS13500 PF00326 Prolyl oligopeptidase family BED35_RS13500 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BED35_RS13505 PF13995 YebF-like protein BED35_RS13510 PF04266 ASCH domain BED35_RS13515 PF07130 YebG protein BED35_RS13520 PF00270 DEAD/DEAH box helicase BED35_RS13520 PF00271 Helicase conserved C-terminal domain BED35_RS13520 PF03880 DbpA RNA binding domain BED35_RS13525 PF02222 ATP-grasp domain BED35_RS13530 PF03701 BED35_RS13530 BED35_RS13535 PF00425 chorismate binding enzyme BED35_RS13535 PF04715 Anthranilate synthase component I, N terminal region BED35_RS13540 PF00293 NUDIX domain BED35_RS13545 PF03313 BED35_RS13545 BED35_RS13545 PF03315 Serine dehydratase beta chain BED35_RS13550 PF01548 BED35_RS13550 BED35_RS13550 PF02371 BED35_RS13550 BED35_RS13555 PF00571 CBS domain BED35_RS13555 PF03471 Transporter associated domain BED35_RS13555 PF03741 BED35_RS13555 BED35_RS13560 PF03610 PTS system fructose IIA component BED35_RS13560 PF03830 PTS system sorbose subfamily IIB component BED35_RS13565 PF03609 BED35_RS13565 BED35_RS13570 PF03613 BED35_RS13570 BED35_RS13575 PF06173 BED35_RS13575 BED35_RS13580 PF02659 BED35_RS13580 BED35_RS13585 PF00593 TonB dependent receptor BED35_RS13585 PF07715 TonB-dependent Receptor Plug Domain BED35_RS13590 PF00989 PAS fold BED35_RS13590 PF00990 GGDEF domain BED35_RS13590 PF08448 PAS fold BED35_RS13590 PF13426 PAS domain BED35_RS13600 PF13847 Methyltransferase domain BED35_RS13605 PF00905 Penicillin binding protein transpeptidase domain BED35_RS13605 PF03717 Penicillin-binding Protein dimerisation domain BED35_RS13610 PF02578 Multi-copper polyphenol oxidoreductase laccase BED35_RS13615 PF00313 'Cold-shock' DNA-binding domain BED35_RS13620 PF10736 BED35_RS13620 BED35_RS13625 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP BED35_RS13635 PF13269 BED35_RS13635 BED35_RS13640 PF10765 Protein of unknown function (DUF2591) BED35_RS13645 PF13974 BED35_RS13645 BED35_RS13650 PF13996 BED35_RS13650 BED35_RS13655 PF10964 BED35_RS13655 BED35_RS13660 PF12833 Helix-turn-helix domain BED35_RS13670 PF13520 Amino acid permease BED35_RS13675 PF00583 Acetyltransferase (GNAT) family BED35_RS13680 PF00005 ABC transporter BED35_RS13680 PF00664 ABC transporter transmembrane region BED35_RS13685 PF01163 RIO1 family BED35_RS13690 PF03372 Endonuclease/Exonuclease/phosphatase family BED35_RS13695 PF03498 Cytolethal distending toxin A/C family BED35_RS13700 PF00990 GGDEF domain BED35_RS13700 PF08447 PAS fold BED35_RS13700 PF13426 PAS domain BED35_RS13710 PF06411 HdeA/HdeB family BED35_RS13715 PF07007 Protein of unknown function (DUF1311) BED35_RS13720 PF12833 Helix-turn-helix domain BED35_RS13725 PF00892 EamA-like transporter family BED35_RS13735 PF03795 YCII-related domain BED35_RS13740 PF01638 HxlR-like helix-turn-helix BED35_RS13745 PF13460 NADH(P)-binding BED35_RS13750 PF01053 Cys/Met metabolism PLP-dependent enzyme BED35_RS13755 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BED35_RS13760 PF00717 Peptidase S24-like BED35_RS13765 PF00817 impB/mucB/samB family BED35_RS13765 PF11798 IMS family HHH motif BED35_RS13765 PF11799 impB/mucB/samB family C-terminal domain BED35_RS13765 PF13438 BED35_RS13765 BED35_RS13770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS13770 PF00672 HAMP domain BED35_RS13770 PF08447 PAS fold BED35_RS13780 PF00356 Bacterial regulatory proteins, lacI family BED35_RS13780 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS13785 PF00251 Glycosyl hydrolases family 32 N-terminal domain BED35_RS13785 PF08244 Glycosyl hydrolases family 32 C terminal BED35_RS13790 PF01306 LacY proton/sugar symporter BED35_RS13795 PF04932 BED35_RS13795 BED35_RS13800 PF00535 Glycosyl transferase family 2 BED35_RS13805 PF00180 Isocitrate/isopropylmalate dehydrogenase BED35_RS13810 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) BED35_RS13835 PF00180 Isocitrate/isopropylmalate dehydrogenase BED35_RS13840 PF00849 RNA pseudouridylate synthase BED35_RS13845 PF00293 NUDIX domain BED35_RS13850 PF03054 tRNA methyl transferase BED35_RS13855 PF04356 Protein of unknown function (DUF489) BED35_RS13860 PF00206 Lyase BED35_RS13860 PF08328 Adenylosuccinate lyase C-terminal BED35_RS13865 PF13505 Outer membrane protein beta-barrel domain BED35_RS13870 PF00072 Response regulator receiver domain BED35_RS13870 PF00486 Transcriptional regulatory protein, C terminal BED35_RS13875 PF00672 HAMP domain BED35_RS13875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS13875 PF08918 PhoQ Sensor BED35_RS13885 PF01546 Peptidase family M20/M25/M40 BED35_RS13885 PF07687 Peptidase dimerisation domain BED35_RS13890 PF02146 Sir2 family BED35_RS13900 PF02687 BED35_RS13900 BED35_RS13900 PF12704 MacB-like periplasmic core domain BED35_RS13905 PF00005 ABC transporter BED35_RS13910 PF02687 BED35_RS13910 BED35_RS13910 PF12704 MacB-like periplasmic core domain BED35_RS13915 PF00270 DEAD/DEAH box helicase BED35_RS13915 PF00271 Helicase conserved C-terminal domain BED35_RS13915 PF02559 CarD-like/TRCF domain BED35_RS13915 PF03461 TRCF domain BED35_RS13920 PF05433 BED35_RS13920 BED35_RS13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS13930 PF05728 Uncharacterised protein family (UPF0227) BED35_RS13935 PF00933 Glycosyl hydrolase family 3 N terminal domain BED35_RS13940 PF01636 Phosphotransferase enzyme family BED35_RS13945 PF13036 Protein of unknown function (DUF3897) BED35_RS13950 PF07233 Protein of unknown function (DUF1425) BED35_RS13955 PF01230 HIT domain BED35_RS13960 PF08501 Shikimate dehydrogenase substrate binding domain BED35_RS13965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS13965 PF12793 BED35_RS13965 BED35_RS13970 PF04055 Radical SAM superfamily BED35_RS13970 PF13394 4Fe-4S single cluster domain BED35_RS13975 PF13437 HlyD family secretion protein BED35_RS13980 PF00005 ABC transporter BED35_RS13980 PF00664 ABC transporter transmembrane region BED35_RS13980 PF03412 Peptidase C39 family BED35_RS13985 PF13650 Aspartyl protease BED35_RS13990 PF00367 phosphotransferase system, EIIB BED35_RS13990 PF02378 Phosphotransferase system, EIIC BED35_RS13995 PF01026 TatD related DNase BED35_RS14000 PF09115 DNA polymerase III, delta subunit, C terminal BED35_RS14000 PF13177 DNA polymerase III, delta subunit BED35_RS14005 PF02223 Thymidylate kinase BED35_RS14010 PF02618 YceG-like family BED35_RS14015 PF01063 Aminotransferase class IV BED35_RS14020 PF00109 Beta-ketoacyl synthase, N-terminal domain BED35_RS14020 PF02801 Beta-ketoacyl synthase, C-terminal domain BED35_RS14025 PF00550 Phosphopantetheine attachment site BED35_RS14030 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS14035 PF00698 Acyl transferase domain BED35_RS14040 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BED35_RS14040 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BED35_RS14045 PF02504 Fatty acid synthesis protein BED35_RS14050 PF01783 Ribosomal L32p protein family BED35_RS14055 PF02620 BED35_RS14055 BED35_RS14060 PF02545 Maf-like protein BED35_RS14065 PF00849 RNA pseudouridylate synthase BED35_RS14065 PF01479 S4 domain BED35_RS14070 PF00575 S1 RNA binding domain BED35_RS14070 PF10150 Ribonuclease E/G family BED35_RS14070 PF12111 Polyribonucleotide phosphorylase C terminal BED35_RS14075 PF03992 Antibiotic biosynthesis monooxygenase BED35_RS14080 PF01979 Amidohydrolase family BED35_RS14085 PF06183 DinI-like family BED35_RS14090 PF13991 BED35_RS14090 BED35_RS14095 PF01266 FAD dependent oxidoreductase BED35_RS14100 PF00196 Bacterial regulatory proteins, luxR family BED35_RS14105 PF01594 BED35_RS14105 BED35_RS14110 PF00581 Rhodanese-like domain BED35_RS14110 PF12368 BED35_RS14110 BED35_RS14120 PF03916 BED35_RS14120 BED35_RS14125 PF13247 4Fe-4S dicluster domain BED35_RS14135 PF00072 Response regulator receiver domain BED35_RS14135 PF00196 Bacterial regulatory proteins, luxR family BED35_RS14140 PF03279 BED35_RS14140 BED35_RS14150 PF07681 BED35_RS14150 BED35_RS14160 PF07690 Major Facilitator Superfamily BED35_RS14165 PF00854 POT family BED35_RS14170 PF00535 Glycosyl transferase family 2 BED35_RS14175 PF04349 Periplasmic glucan biosynthesis protein, MdoG BED35_RS14180 PF01757 BED35_RS14180 BED35_RS14190 PF01548 BED35_RS14190 BED35_RS14190 PF02371 BED35_RS14190 BED35_RS14195 PF00999 Sodium/hydrogen exchanger family BED35_RS14195 PF02080 TrkA-C domain BED35_RS14195 PF03471 Transporter associated domain BED35_RS14200 PF00892 EamA-like transporter family BED35_RS14205 PF00765 Autoinducer synthetase BED35_RS14210 PF00196 Bacterial regulatory proteins, luxR family BED35_RS14210 PF03472 Autoinducer binding domain BED35_RS14225 PF08534 Redoxin BED35_RS14235 PF03916 BED35_RS14235 BED35_RS14240 PF12800 4Fe-4S binding domain BED35_RS14240 PF13247 4Fe-4S dicluster domain BED35_RS14245 PF13435 Cytochrome c554 and c-prime BED35_RS14250 PF02335 Cytochrome c552 BED35_RS14260 PF04358 DsrC like protein BED35_RS14265 PF00708 Acylphosphatase BED35_RS14270 PF07784 BED35_RS14270 BED35_RS14280 PF10672 S-adenosylmethionine-dependent methyltransferase BED35_RS14285 PF08755 Hemimethylated DNA-binding protein YccV like BED35_RS14290 PF13380 CoA binding domain BED35_RS14295 PF09829 BED35_RS14295 BED35_RS14300 PF02142 MGS-like domain BED35_RS14305 PF00580 UvrD/REP helicase N-terminal domain BED35_RS14305 PF12462 BED35_RS14305 BED35_RS14305 PF13361 UvrD-like helicase C-terminal domain BED35_RS14310 PF03733 BED35_RS14310 BED35_RS14315 PF12805 BED35_RS14315 BED35_RS14315 PF13515 BED35_RS14315 BED35_RS14320 PF04993 TfoX N-terminal domain BED35_RS14320 PF04994 TfoX C-terminal domain BED35_RS14330 PF00691 OmpA family BED35_RS14330 PF01389 OmpA-like transmembrane domain BED35_RS14335 PF06303 Organiser of macrodomain of Terminus of chromosome BED35_RS14340 PF05362 Lon protease (S16) C-terminal proteolytic domain BED35_RS14340 PF13654 AAA domain BED35_RS14345 PF07977 FabA-like domain BED35_RS14350 PF01638 HxlR-like helix-turn-helix BED35_RS14355 PF00109 Beta-ketoacyl synthase, N-terminal domain BED35_RS14355 PF02801 Beta-ketoacyl synthase, C-terminal domain BED35_RS14360 PF03886 Protein of unknown function (DUF330) BED35_RS14365 PF02470 BED35_RS14365 BED35_RS14370 PF04403 BED35_RS14370 BED35_RS14375 PF00005 ABC transporter BED35_RS14375 PF12848 ABC transporter BED35_RS14375 PF16326 BED35_RS14375 BED35_RS14380 PF01170 Putative RNA methylase family UPF0020 BED35_RS14380 PF02926 THUMP domain BED35_RS14380 PF10672 S-adenosylmethionine-dependent methyltransferase BED35_RS14385 PF00111 2Fe-2S iron-sulfur cluster binding domain BED35_RS14385 PF03473 MOSC domain BED35_RS14385 PF03476 MOSC N-terminal beta barrel domain BED35_RS14390 PF07126 BED35_RS14390 BED35_RS14395 PF01180 Dihydroorotate dehydrogenase BED35_RS14400 PF01433 Peptidase family M1 BED35_RS14400 PF11940 Domain of unknown function (DUF3458) BED35_RS14405 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BED35_RS14410 PF00152 tRNA synthetases class II (D, K and N) BED35_RS14410 PF01336 OB-fold nucleic acid binding domain BED35_RS14415 PF00267 Gram-negative porin BED35_RS14420 PF00155 Aminotransferase class I and II BED35_RS14430 PF00753 Metallo-beta-lactamase superfamily BED35_RS14435 PF05951 BED35_RS14435 BED35_RS14440 PF01471 Putative peptidoglycan binding domain BED35_RS14440 PF03734 L,D-transpeptidase catalytic domain BED35_RS14445 PF04310 MukB N-terminal BED35_RS14445 PF13558 Putative exonuclease SbcCD, C subunit BED35_RS14445 PF16330 BED35_RS14445 BED35_RS14450 PF04288 MukE-like family BED35_RS14455 PF03882 KicB killing factor BED35_RS14455 PF17192 BED35_RS14455 BED35_RS14455 PF17193 BED35_RS14455 BED35_RS14460 PF13847 Methyltransferase domain BED35_RS14465 PF02698 DUF218 domain BED35_RS14470 PF03881 Fructosamine kinase BED35_RS14475 PF02348 Cytidylyltransferase BED35_RS14480 PF03966 Trm112p-like protein BED35_RS14485 PF00313 'Cold-shock' DNA-binding domain BED35_RS14490 PF00313 'Cold-shock' DNA-binding domain BED35_RS14495 PF07063 Domain of unknown function (DUF1338) BED35_RS14500 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BED35_RS14505 PF00005 ABC transporter BED35_RS14505 PF00664 ABC transporter transmembrane region BED35_RS14510 PF00753 Metallo-beta-lactamase superfamily BED35_RS14510 PF03772 BED35_RS14510 BED35_RS14510 PF13567 BED35_RS14510 BED35_RS14515 PF00216 Bacterial DNA-binding protein BED35_RS14520 PF00575 S1 RNA binding domain BED35_RS14525 PF02224 Cytidylate kinase BED35_RS14530 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BED35_RS14535 PF00266 Aminotransferase class-V BED35_RS14540 PF04239 Protein of unknown function (DUF421) BED35_RS14545 PF00710 Asparaginase BED35_RS14550 PF02624 YcaO-like family BED35_RS14555 PF01226 Formate/nitrite transporter BED35_RS14560 PF01228 Glycine radical BED35_RS14560 PF02901 Pyruvate formate lyase BED35_RS14565 PF04055 Radical SAM superfamily BED35_RS14565 PF13353 4Fe-4S single cluster domain BED35_RS14570 PF07690 Major Facilitator Superfamily BED35_RS14575 PF00872 BED35_RS14575 BED35_RS14585 PF01548 BED35_RS14585 BED35_RS14585 PF02371 BED35_RS14585 BED35_RS14590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BED35_RS14590 PF02403 Seryl-tRNA synthetase N-terminal domain BED35_RS14595 PF00004 ATPase family associated with various cellular activities (AAA) BED35_RS14595 PF12002 MgsA AAA+ ATPase C terminal BED35_RS14595 PF16193 BED35_RS14595 BED35_RS14600 PF03548 Outer membrane lipoprotein carrier protein LolA BED35_RS14605 PF01580 FtsK/SpoIIIE family BED35_RS14605 PF09397 Ftsk gamma domain BED35_RS14605 PF13491 BED35_RS14605 BED35_RS14610 PF01037 AsnC family BED35_RS14610 PF13412 Winged helix-turn-helix DNA-binding BED35_RS14615 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS14620 PF00005 ABC transporter BED35_RS14620 PF00664 ABC transporter transmembrane region BED35_RS14625 PF00005 ABC transporter BED35_RS14625 PF00664 ABC transporter transmembrane region BED35_RS14630 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BED35_RS14635 PF01176 Translation initiation factor 1A / IF-1 BED35_RS14640 PF00004 ATPase family associated with various cellular activities (AAA) BED35_RS14640 PF02861 Clp amino terminal domain BED35_RS14640 PF07724 AAA domain (Cdc48 subfamily) BED35_RS14640 PF10431 C-terminal, D2-small domain, of ClpB protein BED35_RS14645 PF02617 ATP-dependent Clp protease adaptor protein ClpS BED35_RS14650 PF00313 'Cold-shock' DNA-binding domain BED35_RS14655 PF00005 ABC transporter BED35_RS14655 PF02687 BED35_RS14655 BED35_RS14655 PF12704 MacB-like periplasmic core domain BED35_RS14660 PF16576 BED35_RS14660 BED35_RS14665 PF04393 BED35_RS14665 BED35_RS14670 PF11398 Protein of unknown function (DUF2813) BED35_RS14675 PF03956 BED35_RS14675 BED35_RS14680 PF03063 Prismane/CO dehydrogenase family BED35_RS14685 PF00111 2Fe-2S iron-sulfur cluster binding domain BED35_RS14685 PF00175 Oxidoreductase NAD-binding domain BED35_RS14685 PF00970 Oxidoreductase FAD-binding domain BED35_RS14690 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS14690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS14690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS14695 PF04072 Leucine carboxyl methyltransferase BED35_RS14700 PF01212 Beta-eliminating lyase BED35_RS14705 PF11066 BED35_RS14705 BED35_RS14705 PF13460 NADH(P)-binding BED35_RS14710 PF01370 NAD dependent epimerase/dehydratase family BED35_RS14715 PF12883 Protein of unknown function (DUF3828) BED35_RS14720 PF00005 ABC transporter BED35_RS14725 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS14730 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS14735 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS14740 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS14745 PF05958 tRNA (Uracil-5-)-methyltransferase BED35_RS14750 PF10767 BED35_RS14750 BED35_RS14755 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS14760 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS14765 PF00005 ABC transporter BED35_RS14765 PF08402 TOBE domain BED35_RS14770 PF13416 Bacterial extracellular solute-binding protein BED35_RS14775 PF10722 Putative bacterial sensory transduction regulator BED35_RS14780 PF07214 BED35_RS14780 BED35_RS14785 PF00462 Glutaredoxin BED35_RS14790 PF02080 TrkA-C domain BED35_RS14790 PF06826 BED35_RS14790 BED35_RS14795 PF01569 PAP2 superfamily BED35_RS14800 PF01569 PAP2 superfamily BED35_RS14805 PF01791 DeoC/LacD family aldolase BED35_RS14810 PF00455 BED35_RS14810 BED35_RS14810 PF08220 DeoR-like helix-turn-helix domain BED35_RS14815 PF03222 Tryptophan/tyrosine permease family BED35_RS14820 PF03313 BED35_RS14820 BED35_RS14820 PF03315 Serine dehydratase beta chain BED35_RS14825 PF01548 BED35_RS14825 BED35_RS14825 PF02371 BED35_RS14825 BED35_RS14830 PF00768 D-alanyl-D-alanine carboxypeptidase BED35_RS14830 PF07943 Penicillin-binding protein 5, C-terminal domain BED35_RS14835 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS14835 PF00571 CBS domain BED35_RS14840 PF01053 Cys/Met metabolism PLP-dependent enzyme BED35_RS14845 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS14850 PF00005 ABC transporter BED35_RS14850 PF09383 NIL domain BED35_RS14855 PF03180 NLPA lipoprotein BED35_RS14860 PF03171 2OG-Fe(II) oxygenase superfamily BED35_RS14860 PF14226 non-haem dioxygenase in morphine synthesis N-terminal BED35_RS14865 PF12710 haloacid dehalogenase-like hydrolase BED35_RS14870 PF00043 Glutathione S-transferase, C-terminal domain BED35_RS14870 PF02798 Glutathione S-transferase, N-terminal domain BED35_RS14875 PF00593 TonB dependent receptor BED35_RS14875 PF07715 TonB-dependent Receptor Plug Domain BED35_RS14880 PF00005 ABC transporter BED35_RS14885 PF01032 FecCD transport family BED35_RS14890 PF00324 Amino acid permease BED35_RS14895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS14895 PF03466 LysR substrate binding domain BED35_RS14910 PF03601 BED35_RS14910 BED35_RS14915 PF01261 Xylose isomerase-like TIM barrel BED35_RS14920 PF00577 Outer membrane usher protein BED35_RS14920 PF13953 PapC C-terminal domain BED35_RS14920 PF13954 PapC N-terminal domain BED35_RS14925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS14925 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS14940 PF00486 Transcriptional regulatory protein, C terminal BED35_RS14945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED35_RS14945 PF02378 Phosphotransferase system, EIIC BED35_RS14950 PF00294 pfkB family carbohydrate kinase BED35_RS14955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED35_RS14955 PF00381 PTS HPr component phosphorylation site BED35_RS14960 PF00293 NUDIX domain BED35_RS14965 PF03264 NapC/NirT cytochrome c family, N-terminal region BED35_RS14970 PF00384 Molybdopterin oxidoreductase BED35_RS14970 PF01568 Molydopterin dinucleotide binding domain BED35_RS14975 PF03692 BED35_RS14975 BED35_RS14980 PF03222 Tryptophan/tyrosine permease family BED35_RS14985 PF01132 Elongation factor P (EF-P) OB domain BED35_RS14985 PF08207 Elongation factor P (EF-P) KOW-like domain BED35_RS14985 PF09285 Elongation factor P, C-terminal BED35_RS14990 PF03786 D-mannonate dehydratase (UxuA) BED35_RS15000 PF01232 Mannitol dehydrogenase Rossmann domain BED35_RS15000 PF08125 Mannitol dehydrogenase C-terminal domain BED35_RS15005 PF00392 Bacterial regulatory proteins, gntR family BED35_RS15005 PF07729 FCD domain BED35_RS15015 PF02492 CobW/HypB/UreG, nucleotide-binding domain BED35_RS15015 PF07683 Cobalamin synthesis protein cobW C-terminal domain BED35_RS15020 PF01569 PAP2 superfamily BED35_RS15025 PF00877 NlpC/P60 family BED35_RS15035 PF00563 EAL domain BED35_RS15035 PF12792 BED35_RS15035 BED35_RS15040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS15045 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS15050 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS15050 PF12911 BED35_RS15050 BED35_RS15055 PF00005 ABC transporter BED35_RS15055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED35_RS15060 PF13989 BED35_RS15060 BED35_RS15065 PF07690 Major Facilitator Superfamily BED35_RS15070 PF00849 RNA pseudouridylate synthase BED35_RS15070 PF01479 S4 domain BED35_RS15075 PF00271 Helicase conserved C-terminal domain BED35_RS15075 PF04851 Type III restriction enzyme, res subunit BED35_RS15080 PF01386 Ribosomal L25p family BED35_RS15085 PF04245 BED35_RS15085 BED35_RS15090 PF07208 Protein of unknown function (DUF1414) BED35_RS15095 PF00884 Sulfatase BED35_RS15095 PF11893 BED35_RS15095 BED35_RS15110 PF07377 Protein of unknown function (DUF1493) BED35_RS15115 PF00872 BED35_RS15115 BED35_RS15120 PF06551 BED35_RS15120 BED35_RS15125 PF01527 Transposase BED35_RS15130 PF13276 BED35_RS15130 BED35_RS15135 PF13751 BED35_RS15135 BED35_RS15140 PF00891 O-methyltransferase BED35_RS15145 PF00194 Eukaryotic-type carbonic anhydrase BED35_RS15150 PF00232 Glycosyl hydrolase family 1 BED35_RS15155 PF00367 phosphotransferase system, EIIB BED35_RS15155 PF02378 Phosphotransferase system, EIIC BED35_RS15160 PF01380 SIS domain BED35_RS15160 PF01418 Helix-turn-helix domain, rpiR family BED35_RS15170 PF10828 BED35_RS15170 BED35_RS15180 PF06530 BED35_RS15180 BED35_RS15185 PF00717 Peptidase S24-like BED35_RS15185 PF01381 Helix-turn-helix BED35_RS15190 PF06183 DinI-like family BED35_RS15195 PF01278 Omptin family BED35_RS15200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS15200 PF00672 HAMP domain BED35_RS15200 PF02743 Cache domain BED35_RS15205 PF12706 Beta-lactamase superfamily domain BED35_RS15210 PF13347 MFS/sugar transport protein BED35_RS15215 PF00144 Beta-lactamase BED35_RS15230 PF00267 Gram-negative porin BED35_RS15235 PF00529 HlyD family secretion protein BED35_RS15240 PF13533 Biotin-lipoyl like BED35_RS15245 PF07690 Major Facilitator Superfamily BED35_RS15250 PF01627 Hpt domain BED35_RS15250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS15250 PF16359 BED35_RS15250 BED35_RS15255 PF00072 Response regulator receiver domain BED35_RS15255 PF00196 Bacterial regulatory proteins, luxR family BED35_RS15260 PF00072 Response regulator receiver domain BED35_RS15260 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS15260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS15260 PF09456 RcsC Alpha-Beta-Loop (ABL) BED35_RS15265 PF00521 DNA gyrase/topoisomerase IV, subunit A BED35_RS15265 PF03989 DNA gyrase C-terminal domain, beta-propeller BED35_RS15270 PF13489 Methyltransferase domain BED35_RS15275 PF00317 Ribonucleotide reductase, all-alpha domain BED35_RS15275 PF02867 Ribonucleotide reductase, barrel domain BED35_RS15275 PF03477 ATP cone domain BED35_RS15280 PF00268 Ribonucleotide reductase, small chain BED35_RS15290 PF03974 Ecotin BED35_RS15305 PF00994 Probable molybdopterin binding domain BED35_RS15310 PF03222 Tryptophan/tyrosine permease family BED35_RS15315 PF07437 BED35_RS15315 BED35_RS15320 PF00199 Catalase BED35_RS15320 PF06628 Catalase-related immune-responsive BED35_RS15325 PF00501 AMP-binding enzyme BED35_RS15325 PF13193 AMP-binding enzyme C-terminal domain BED35_RS15330 PF13378 Enolase C-terminal domain-like BED35_RS15335 PF00378 Enoyl-CoA hydratase/isomerase family BED35_RS15340 PF12697 Alpha/beta hydrolase family BED35_RS15345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS15345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS15345 PF16582 BED35_RS15345 BED35_RS15350 PF00425 chorismate binding enzyme BED35_RS15355 PF05957 BED35_RS15355 BED35_RS15360 PF00920 Dehydratase family BED35_RS15365 PF03928 Domain of unknown function (DUF336) BED35_RS15370 PF07690 Major Facilitator Superfamily BED35_RS15375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_RS15375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED35_RS15380 PF00356 Bacterial regulatory proteins, lacI family BED35_RS15380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS15385 PF00106 short chain dehydrogenase BED35_RS15390 PF01202 Shikimate kinase BED35_RS15395 PF04074 Domain of unknown function (DUF386) BED35_RS15400 PF06496 BED35_RS15400 BED35_RS15410 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BED35_RS15415 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BED35_RS15420 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains BED35_RS15420 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BED35_RS15425 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BED35_RS15430 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BED35_RS15435 PF12838 4Fe-4S dicluster domain BED35_RS15440 PF00146 NADH dehydrogenase BED35_RS15445 PF00384 Molybdopterin oxidoreductase BED35_RS15445 PF01568 Molydopterin dinucleotide binding domain BED35_RS15445 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS15445 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BED35_RS15445 PF13510 2Fe-2S iron-sulfur cluster binding domain BED35_RS15450 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BED35_RS15450 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BED35_RS15455 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin BED35_RS15460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BED35_RS15460 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BED35_RS15465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BED35_RS15470 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BED35_RS15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS15475 PF03466 LysR substrate binding domain BED35_RS15480 PF00155 Aminotransferase class I and II BED35_RS15485 PF13023 HD domain BED35_RS15490 PF02080 TrkA-C domain BED35_RS15490 PF03600 Citrate transporter BED35_RS15500 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS15505 PF03887 YfbU domain BED35_RS15510 PF04217 BED35_RS15510 BED35_RS15515 PF00871 Acetokinase family BED35_RS15520 PF01515 Phosphate acetyl/butaryl transferase BED35_RS15520 PF07085 DRTGG domain BED35_RS15520 PF13500 AAA domain BED35_RS15525 PF00356 Bacterial regulatory proteins, lacI family BED35_RS15525 PF13377 Periplasmic binding protein-like domain BED35_RS15530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED35_RS15535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED35_RS15540 PF03611 BED35_RS15540 BED35_RS15545 PF01548 BED35_RS15545 BED35_RS15545 PF02371 BED35_RS15545 BED35_RS15550 PF00293 NUDIX domain BED35_RS15560 PF00563 EAL domain BED35_RS15565 PF01370 NAD dependent epimerase/dehydratase family BED35_RS15565 PF08338 Domain of unknown function (DUF1731) BED35_RS15575 PF00005 ABC transporter BED35_RS15580 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS15585 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS15590 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS15595 PF02441 Flavoprotein BED35_RS15600 PF00156 Phosphoribosyl transferase domain BED35_RS15600 PF13522 Glutamine amidotransferase domain BED35_RS15605 PF02674 BED35_RS15605 BED35_RS15610 PF05036 Sporulation related domain BED35_RS15615 PF02875 Mur ligase family, glutamate ligase domain BED35_RS15615 PF08245 Mur ligase middle domain BED35_RS15620 PF01039 Carboxyl transferase domain BED35_RS15625 PF09335 BED35_RS15625 BED35_RS15630 PF01416 tRNA pseudouridine synthase BED35_RS15635 PF01118 Semialdehyde dehydrogenase, NAD binding domain BED35_RS15635 PF02774 Semialdehyde dehydrogenase, dimerisation domain BED35_RS15640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_RS15640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED35_RS15640 PF11890 Domain of unknown function (DUF3410) BED35_RS15645 PF07883 Cupin domain BED35_RS15645 PF12833 Helix-turn-helix domain BED35_RS15650 PF00892 EamA-like transporter family BED35_RS15655 PF00892 EamA-like transporter family BED35_RS15660 PF00155 Aminotransferase class I and II BED35_RS15660 PF00392 Bacterial regulatory proteins, gntR family BED35_RS15665 PF00578 AhpC/TSA family BED35_RS15670 PF01323 DSBA-like thioredoxin domain BED35_RS15675 PF02683 BED35_RS15675 BED35_RS15675 PF11412 Disulphide bond corrector protein DsbC BED35_RS15675 PF13899 Thioredoxin-like BED35_RS15690 PF03600 Citrate transporter BED35_RS15695 PF00328 Histidine phosphatase superfamily (branch 2) BED35_RS15700 PF00356 Bacterial regulatory proteins, lacI family BED35_RS15700 PF13377 Periplasmic binding protein-like domain BED35_RS15705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED35_RS15710 PF02378 Phosphotransferase system, EIIC BED35_RS15715 PF00232 Glycosyl hydrolase family 1 BED35_RS15720 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BED35_RS15725 PF02264 LamB porin BED35_RS15730 PF01177 Asp/Glu/Hydantoin racemase BED35_RS15740 PF00109 Beta-ketoacyl synthase, N-terminal domain BED35_RS15740 PF02801 Beta-ketoacyl synthase, C-terminal domain BED35_RS15745 PF01266 FAD dependent oxidoreductase BED35_RS15745 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BED35_RS15750 PF08891 BED35_RS15750 BED35_RS15755 PF04315 BED35_RS15755 BED35_RS15760 PF01925 BED35_RS15760 BED35_RS15765 PF03411 Penicillin-insensitive murein endopeptidase BED35_RS15770 PF01264 Chorismate synthase BED35_RS15775 PF05175 Methyltransferase small domain BED35_RS15780 PF01713 Smr domain BED35_RS15785 PF00300 Histidine phosphatase superfamily (branch 1) BED35_RS15790 PF00378 Enoyl-CoA hydratase/isomerase family BED35_RS15790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BED35_RS15790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BED35_RS15795 PF00108 Thiolase, N-terminal domain BED35_RS15795 PF02803 Thiolase, C-terminal domain BED35_RS15800 PF04175 Protein of unknown function (DUF406) BED35_RS15805 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BED35_RS15810 PF04333 BED35_RS15810 BED35_RS15815 PF14559 Tetratricopeptide repeat BED35_RS15820 PF03918 Cytochrome C biogenesis protein BED35_RS15825 PF08534 Redoxin BED35_RS15830 PF01578 BED35_RS15830 BED35_RS15830 PF16327 BED35_RS15830 BED35_RS15835 PF03100 CcmE BED35_RS15840 PF04995 BED35_RS15840 BED35_RS15845 PF01578 BED35_RS15845 BED35_RS15850 PF03379 BED35_RS15850 BED35_RS15855 PF00005 ABC transporter BED35_RS15860 PF01548 BED35_RS15860 BED35_RS15860 PF02371 BED35_RS15860 BED35_RS15865 PF01226 Formate/nitrite transporter BED35_RS15875 PF00589 Phage integrase family BED35_RS15875 PF13356 Domain of unknown function (DUF4102) BED35_RS15885 PF04606 BED35_RS15885 BED35_RS15890 PF06048 BED35_RS15890 BED35_RS15890 PF08273 Zinc-binding domain of primase-helicase BED35_RS15890 PF13362 Toprim domain BED35_RS15910 PF05929 BED35_RS15910 BED35_RS15915 PF05125 BED35_RS15915 BED35_RS15925 PF05930 Prophage CP4-57 regulatory protein (AlpA) BED35_RS15935 PF03831 PhnA protein BED35_RS15935 PF08274 PhnA Zinc-Ribbon BED35_RS15940 PF03551 Transcriptional regulator PadR-like family BED35_RS15945 PF12977 Domain of Unknown Function with PDB structure (DUF3861) BED35_RS15950 PF00232 Glycosyl hydrolase family 1 BED35_RS15955 PF00367 phosphotransferase system, EIIB BED35_RS15955 PF02378 Phosphotransferase system, EIIC BED35_RS15960 PF00356 Bacterial regulatory proteins, lacI family BED35_RS15960 PF13377 Periplasmic binding protein-like domain BED35_RS15965 PF04264 YceI-like domain BED35_RS15970 PF01292 Prokaryotic cytochrome b561 BED35_RS15975 PF07859 alpha/beta hydrolase fold BED35_RS15985 PF03886 Protein of unknown function (DUF330) BED35_RS15990 PF02470 BED35_RS15990 BED35_RS15995 PF00005 ABC transporter BED35_RS16000 PF02405 BED35_RS16000 BED35_RS16005 PF07690 Major Facilitator Superfamily BED35_RS16010 PF00440 Bacterial regulatory proteins, tetR family BED35_RS16010 PF13977 Bacterial transcriptional repressor BED35_RS16015 PF07969 Amidohydrolase family BED35_RS16020 PF00324 Amino acid permease BED35_RS16025 PF13406 Transglycosylase SLT domain BED35_RS16030 PF13343 Bacterial extracellular solute-binding protein BED35_RS16035 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS16040 PF00005 ABC transporter BED35_RS16050 PF09900 BED35_RS16050 BED35_RS16055 PF15970 BED35_RS16055 BED35_RS16060 PF01292 Prokaryotic cytochrome b561 BED35_RS16065 PF00155 Aminotransferase class I and II BED35_RS16070 PF13302 Acetyltransferase (GNAT) domain BED35_RS16075 PF07350 Protein of unknown function (DUF1479) BED35_RS16085 PF00072 Response regulator receiver domain BED35_RS16085 PF04397 LytTr DNA-binding domain BED35_RS16095 PF02685 Glucokinase BED35_RS16100 PF05232 BED35_RS16100 BED35_RS16105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS16105 PF03466 LysR substrate binding domain BED35_RS16110 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS16110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS16110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS16115 PF00248 Aldo/keto reductase family BED35_RS16120 PF10697 BED35_RS16120 BED35_RS16125 PF01566 BED35_RS16125 BED35_RS16130 PF01773 Na+ dependent nucleoside transporter N-terminus BED35_RS16130 PF07662 Na+ dependent nucleoside transporter C-terminus BED35_RS16130 PF07670 Nucleoside recognition BED35_RS16160 PF00749 tRNA synthetases class I (E and Q), catalytic domain BED35_RS16175 PF06042 Bacterial protein of unknown function (DUF925) BED35_RS16180 PF00992 Troponin BED35_RS16180 PF14282 BED35_RS16180 BED35_RS16185 PF12843 BED35_RS16185 BED35_RS16190 PF00533 BRCA1 C Terminus (BRCT) domain BED35_RS16190 PF01653 NAD-dependent DNA ligase adenylation domain BED35_RS16190 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BED35_RS16190 PF03120 NAD-dependent DNA ligase OB-fold domain BED35_RS16190 PF12826 Helix-hairpin-helix motif BED35_RS16190 PF14520 Helix-hairpin-helix domain BED35_RS16195 PF04354 ZipA, C-terminal FtsZ-binding domain BED35_RS16200 PF07264 Etoposide-induced protein 2 BED35_RS16205 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS16210 PF00381 PTS HPr component phosphorylation site BED35_RS16215 PF00391 PEP-utilising enzyme, mobile domain BED35_RS16215 PF02896 PEP-utilising enzyme, TIM barrel domain BED35_RS16215 PF05524 PEP-utilising enzyme, N-terminal BED35_RS16220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BED35_RS16225 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS16225 PF00672 HAMP domain BED35_RS16225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS16230 PF00072 Response regulator receiver domain BED35_RS16230 PF00486 Transcriptional regulatory protein, C terminal BED35_RS16235 PF16576 BED35_RS16235 BED35_RS16240 PF00005 ABC transporter BED35_RS16240 PF02687 BED35_RS16240 BED35_RS16240 PF12704 MacB-like periplasmic core domain BED35_RS16245 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS16250 PF00005 ABC transporter BED35_RS16255 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS16260 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS16265 PF13531 Bacterial extracellular solute-binding protein BED35_RS16270 PF07690 Major Facilitator Superfamily BED35_RS16275 PF01380 SIS domain BED35_RS16275 PF01418 Helix-turn-helix domain, rpiR family BED35_RS16280 PF04074 Domain of unknown function (DUF386) BED35_RS16285 PF00480 ROK family BED35_RS16290 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BED35_RS16295 PF00701 Dihydrodipicolinate synthetase family BED35_RS16300 PF01548 BED35_RS16300 BED35_RS16300 PF02371 BED35_RS16300 BED35_RS16305 PF04261 Dyp-type peroxidase family BED35_RS16310 PF06572 Protein of unknown function (DUF1131) BED35_RS16315 PF04076 Bacterial OB fold (BOF) protein BED35_RS16320 PF00583 Acetyltransferase (GNAT) family BED35_RS16325 PF01218 Coproporphyrinogen III oxidase BED35_RS16330 PF02639 BED35_RS16330 BED35_RS16340 PF00390 Malic enzyme, N-terminal domain BED35_RS16340 PF01515 Phosphate acetyl/butaryl transferase BED35_RS16340 PF03949 Malic enzyme, NAD binding domain BED35_RS16345 PF00293 NUDIX domain BED35_RS16355 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BED35_RS16360 PF00384 Molybdopterin oxidoreductase BED35_RS16360 PF01568 Molydopterin dinucleotide binding domain BED35_RS16360 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS16360 PF10518 TAT (twin-arginine translocation) pathway signal sequence BED35_RS16365 PF03927 NapD protein BED35_RS16370 PF12838 4Fe-4S dicluster domain BED35_RS16370 PF13187 4Fe-4S dicluster domain BED35_RS16375 PF00072 Response regulator receiver domain BED35_RS16375 PF00196 Bacterial regulatory proteins, luxR family BED35_RS16380 PF09904 Winged helix-turn helix BED35_RS16385 PF00873 AcrB/AcrD/AcrF family BED35_RS16395 PF02624 YcaO-like family BED35_RS16400 PF12688 Tetratrico peptide repeat BED35_RS16405 PF03960 ArsC family BED35_RS16410 PF01546 Peptidase family M20/M25/M40 BED35_RS16410 PF07687 Peptidase dimerisation domain BED35_RS16415 PF02557 D-alanyl-D-alanine carboxypeptidase BED35_RS16420 PF13980 BED35_RS16420 BED35_RS16435 PF13505 Outer membrane protein beta-barrel domain BED35_RS16450 PF01548 BED35_RS16450 BED35_RS16450 PF02371 BED35_RS16450 BED35_RS16455 PF03245 BED35_RS16455 BED35_RS16460 PF02230 Phospholipase/Carboxylesterase BED35_RS16470 PF05127 Helicase BED35_RS16470 PF08351 Domain of unknown function (DUF1726) BED35_RS16470 PF13718 GNAT acetyltransferase 2 BED35_RS16470 PF17176 BED35_RS16470 BED35_RS16475 PF04284 BED35_RS16475 BED35_RS16480 PF04228 BED35_RS16480 BED35_RS16485 PF01259 SAICAR synthetase BED35_RS16490 PF06804 NlpB/DapX lipoprotein BED35_RS16495 PF00701 Dihydrodipicolinate synthetase family BED35_RS16500 PF13740 ACT domain BED35_RS16505 PF00578 AhpC/TSA family BED35_RS16510 PF01594 BED35_RS16510 BED35_RS16515 PF01435 Peptidase family M48 BED35_RS16515 PF14559 Tetratricopeptide repeat BED35_RS16520 PF03960 ArsC family BED35_RS16525 PF00308 Bacterial dnaA protein BED35_RS16530 PF00860 Permease family BED35_RS16535 PF14681 Uracil phosphoribosyltransferase BED35_RS16540 PF00586 AIR synthase related protein, N-terminal domain BED35_RS16540 PF02769 AIR synthase related protein, C-terminal domain BED35_RS16545 PF00551 Formyl transferase BED35_RS16550 PF13302 Acetyltransferase (GNAT) domain BED35_RS16560 PF00005 ABC transporter BED35_RS16565 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS16570 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS16580 PF02541 Ppx/GppA phosphatase family BED35_RS16585 PF11119 BED35_RS16585 BED35_RS16595 PF00563 EAL domain BED35_RS16595 PF00990 GGDEF domain BED35_RS16595 PF05231 BED35_RS16595 BED35_RS16595 PF08447 PAS fold BED35_RS16595 PF08448 PAS fold BED35_RS16600 PF00012 Hsp70 protein BED35_RS16605 PF13437 HlyD family secretion protein BED35_RS16605 PF13533 Biotin-lipoyl like BED35_RS16610 PF00873 AcrB/AcrD/AcrF family BED35_RS16615 PF00873 AcrB/AcrD/AcrF family BED35_RS16620 PF07690 Major Facilitator Superfamily BED35_RS16625 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS16625 PF00672 HAMP domain BED35_RS16625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS16630 PF00072 Response regulator receiver domain BED35_RS16630 PF00486 Transcriptional regulatory protein, C terminal BED35_RS16635 PF07411 Domain of unknown function (DUF1508) BED35_RS16640 PF01136 BED35_RS16640 BED35_RS16640 PF16325 BED35_RS16640 BED35_RS16645 PF00781 Diacylglycerol kinase catalytic domain BED35_RS16650 PF03608 BED35_RS16650 BED35_RS16655 PF03612 BED35_RS16655 BED35_RS16655 PF07663 BED35_RS16655 BED35_RS16660 PF03829 PTS system glucitol/sorbitol-specific IIA component BED35_RS16665 PF00106 short chain dehydrogenase BED35_RS16670 PF06923 BED35_RS16670 BED35_RS16675 PF00455 BED35_RS16675 BED35_RS16675 PF08220 DeoR-like helix-turn-helix domain BED35_RS16680 PF00571 CBS domain BED35_RS16680 PF01380 SIS domain BED35_RS16685 PF08816 Inhibitor of vertebrate lysozyme (Ivy) BED35_RS16695 PF08543 Phosphomethylpyrimidine kinase BED35_RS16710 PF03864 Phage major capsid protein E BED35_RS16725 PF00872 BED35_RS16725 BED35_RS16755 PF00589 Phage integrase family BED35_RS16765 PF01548 BED35_RS16765 BED35_RS16765 PF02371 BED35_RS16765 BED35_RS16770 PF00034 Cytochrome c BED35_RS16770 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BED35_RS16780 PF12318 BED35_RS16780 BED35_RS16790 PF00117 Glutamine amidotransferase class-I BED35_RS16790 PF00958 GMP synthase C terminal domain BED35_RS16790 PF02540 NAD synthase BED35_RS16795 PF00478 IMP dehydrogenase / GMP reductase domain BED35_RS16795 PF00571 CBS domain BED35_RS16800 PF02601 BED35_RS16800 BED35_RS16800 PF13742 BED35_RS16800 BED35_RS16805 PF07191 zinc-ribbons BED35_RS16810 PF03547 BED35_RS16810 BED35_RS16815 PF01548 BED35_RS16815 BED35_RS16815 PF02371 BED35_RS16815 BED35_RS16820 PF01926 50S ribosome-binding GTPase BED35_RS16820 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BED35_RS16830 PF13360 PQQ-like domain BED35_RS16835 PF09976 Tetratricopeptide repeat BED35_RS16840 PF03129 Anticodon binding domain BED35_RS16840 PF13393 Histidyl-tRNA synthetase BED35_RS16845 PF04551 GcpE protein BED35_RS16850 PF13413 Helix-turn-helix domain BED35_RS16850 PF13464 BED35_RS16850 BED35_RS16855 PF13432 Tetratricopeptide repeat BED35_RS16860 PF04055 Radical SAM superfamily BED35_RS16865 PF00334 Nucleoside diphosphate kinase BED35_RS16875 PF00905 Penicillin binding protein transpeptidase domain BED35_RS16875 PF00912 Transglycosylase BED35_RS16875 PF06832 BED35_RS16875 BED35_RS16880 PF00207 Alpha-2-macroglobulin family BED35_RS16880 PF01835 MG2 domain BED35_RS16880 PF07703 Alpha-2-macroglobulin family N-terminal region BED35_RS16880 PF10569 Alpha-macro-globulin thiol-ester bond-forming region BED35_RS16880 PF11974 Alpha-2-macroglobulin MG1 domain BED35_RS16885 PF03212 Pertactin BED35_RS16885 PF03797 Autotransporter beta-domain BED35_RS16890 PF07179 BED35_RS16890 BED35_RS16890 PF14581 BED35_RS16890 BED35_RS16895 PF00883 Cytosol aminopeptidase family, catalytic domain BED35_RS16895 PF12404 BED35_RS16895 BED35_RS16900 PF04384 Iron-sulphur cluster assembly BED35_RS16905 PF00111 2Fe-2S iron-sulfur cluster binding domain BED35_RS16910 PF00012 Hsp70 protein BED35_RS16915 PF00226 DnaJ domain BED35_RS16915 PF07743 HSCB C-terminal oligomerisation domain BED35_RS16920 PF01521 Iron-sulphur cluster biosynthesis BED35_RS16925 PF01592 NifU-like N terminal domain BED35_RS16930 PF00266 Aminotransferase class-V BED35_RS16935 PF02082 Transcriptional regulator BED35_RS16940 PF00588 SpoU rRNA Methylase family BED35_RS16945 PF00459 Inositol monophosphatase family BED35_RS16950 PF03824 BED35_RS16950 BED35_RS16955 PF06226 BED35_RS16955 BED35_RS16965 PF12832 MFS_1 like family BED35_RS16970 PF00464 Serine hydroxymethyltransferase BED35_RS16975 PF00042 Globin BED35_RS16975 PF00175 Oxidoreductase NAD-binding domain BED35_RS16975 PF00970 Oxidoreductase FAD-binding domain BED35_RS16980 PF14502 Helix-turn-helix domain BED35_RS16980 PF14503 YhfZ C-terminal domain BED35_RS16985 PF00874 PRD domain BED35_RS16990 PF01168 Alanine racemase, N-terminal domain BED35_RS16995 PF02126 Phosphotriesterase family BED35_RS17000 PF10941 BED35_RS17000 BED35_RS17010 PF00543 Nitrogen regulatory protein P-II BED35_RS17015 PF00795 Carbon-nitrogen hydrolase BED35_RS17015 PF02540 NAD synthase BED35_RS17020 PF00072 Response regulator receiver domain BED35_RS17020 PF00158 Sigma-54 interaction domain BED35_RS17025 PF13942 BED35_RS17025 BED35_RS17030 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS17030 PF00672 HAMP domain BED35_RS17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS17040 PF02769 AIR synthase related protein, C-terminal domain BED35_RS17040 PF13507 CobB/CobQ-like glutamine amidotransferase domain BED35_RS17045 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS17045 PF01464 Transglycosylase SLT domain BED35_RS17050 PF14437 BED35_RS17050 BED35_RS17055 PF09925 BED35_RS17055 BED35_RS17060 PF12710 haloacid dehalogenase-like hydrolase BED35_RS17065 PF01380 SIS domain BED35_RS17070 PF01380 SIS domain BED35_RS17070 PF01418 Helix-turn-helix domain, rpiR family BED35_RS17075 PF12838 4Fe-4S dicluster domain BED35_RS17085 PF01648 4'-phosphopantetheinyl transferase superfamily BED35_RS17090 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BED35_RS17095 PF02565 Recombination protein O C terminal BED35_RS17095 PF11967 Recombination protein O N terminal BED35_RS17100 PF01926 50S ribosome-binding GTPase BED35_RS17100 PF07650 KH domain BED35_RS17105 PF00035 Double-stranded RNA binding motif BED35_RS17105 PF14622 Ribonuclease-III-like BED35_RS17110 PF00717 Peptidase S24-like BED35_RS17110 PF10502 Signal peptidase, peptidase S26 BED35_RS17115 PF00009 Elongation factor Tu GTP binding domain BED35_RS17115 PF00679 Elongation factor G C-terminus BED35_RS17115 PF03144 Elongation factor Tu domain 2 BED35_RS17115 PF06421 GTP-binding protein LepA C-terminus BED35_RS17125 PF04246 BED35_RS17125 BED35_RS17130 PF03888 MucB/RseB family BED35_RS17130 PF17188 BED35_RS17130 BED35_RS17135 PF03872 Anti sigma-E protein RseA, N-terminal domain BED35_RS17135 PF03873 Anti sigma-E protein RseA, C-terminal domain BED35_RS17140 PF04542 Sigma-70 region 2 BED35_RS17140 PF08281 Sigma-70, region 4 BED35_RS17145 PF00890 FAD binding domain BED35_RS17145 PF02910 Fumarate reductase flavoprotein C-term BED35_RS17150 PF05175 Methyltransferase small domain BED35_RS17155 PF00270 DEAD/DEAH box helicase BED35_RS17155 PF00271 Helicase conserved C-terminal domain BED35_RS17160 PF01548 BED35_RS17160 BED35_RS17160 PF02371 BED35_RS17160 BED35_RS17165 PF01548 BED35_RS17165 BED35_RS17165 PF02371 BED35_RS17165 BED35_RS17170 PF00023 Ankyrin repeat BED35_RS17170 PF12796 Ankyrin repeats (3 copies) BED35_RS17185 PF01228 Glycine radical BED35_RS17190 PF03167 Uracil DNA glycosylase superfamily BED35_RS17195 PF01025 GrpE BED35_RS17200 PF01513 ATP-NAD kinase BED35_RS17205 PF02463 RecF/RecN/SMC N terminal domain BED35_RS17210 PF04355 SmpA / OmlA family BED35_RS17215 PF03658 RnfH family Ubiquitin BED35_RS17220 PF03364 Polyketide cyclase / dehydrase and lipid transport BED35_RS17225 PF01668 SmpB protein BED35_RS17240 PF00916 BED35_RS17240 BED35_RS17240 PF01740 STAS domain BED35_RS17245 PF04794 YdjC-like protein BED35_RS17250 PF07883 Cupin domain BED35_RS17250 PF12833 Helix-turn-helix domain BED35_RS17255 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BED35_RS17260 PF00232 Glycosyl hydrolase family 1 BED35_RS17265 PF02378 Phosphotransferase system, EIIC BED35_RS17270 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED35_RS17280 PF01548 BED35_RS17280 BED35_RS17280 PF02371 BED35_RS17280 BED35_RS17285 PF00248 Aldo/keto reductase family BED35_RS17290 PF02537 BED35_RS17290 BED35_RS17295 PF02537 BED35_RS17295 BED35_RS17300 PF02254 TrkA-N domain BED35_RS17300 PF07885 Ion channel BED35_RS17305 PF06411 HdeA/HdeB family BED35_RS17310 PF03824 BED35_RS17310 BED35_RS17315 PF03253 Urea transporter BED35_RS17320 PF01774 UreD urease accessory protein BED35_RS17325 PF02492 CobW/HypB/UreG, nucleotide-binding domain BED35_RS17330 PF01730 UreF BED35_RS17335 PF02814 UreE urease accessory protein, N-terminal domain BED35_RS17335 PF05194 UreE urease accessory protein, C-terminal domain BED35_RS17340 PF00449 Urease alpha-subunit, N-terminal domain BED35_RS17340 PF01979 Amidohydrolase family BED35_RS17345 PF00699 Urease beta subunit BED35_RS17350 PF00547 Urease, gamma subunit BED35_RS17355 PF00005 ABC transporter BED35_RS17360 PF00005 ABC transporter BED35_RS17365 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS17370 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS17375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS17390 PF00581 Rhodanese-like domain BED35_RS17400 PF12833 Helix-turn-helix domain BED35_RS17405 PF00313 'Cold-shock' DNA-binding domain BED35_RS17410 PF04899 BED35_RS17410 BED35_RS17420 PF09400 Protein of unknown function (DUF2002) BED35_RS17425 PF07690 Major Facilitator Superfamily BED35_RS17430 PF12833 Helix-turn-helix domain BED35_RS17435 PF03403 Platelet-activating factor acetylhydrolase, isoform II BED35_RS17440 PF06392 BED35_RS17440 BED35_RS17445 PF05957 BED35_RS17445 BED35_RS17450 PF00155 Aminotransferase class I and II BED35_RS17450 PF00392 Bacterial regulatory proteins, gntR family BED35_RS17455 PF02627 Carboxymuconolactone decarboxylase family BED35_RS17460 PF00462 Glutaredoxin BED35_RS17465 PF07972 NrdI Flavodoxin like BED35_RS17470 PF00317 Ribonucleotide reductase, all-alpha domain BED35_RS17470 PF02867 Ribonucleotide reductase, barrel domain BED35_RS17470 PF08343 Ribonucleotide reductase N-terminal BED35_RS17475 PF00268 Ribonucleotide reductase, small chain BED35_RS17480 PF00005 ABC transporter BED35_RS17480 PF00571 CBS domain BED35_RS17485 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS17490 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BED35_RS17500 PF00929 Exonuclease BED35_RS17505 PF00075 RNase H BED35_RS17510 PF08241 Methyltransferase domain BED35_RS17515 PF00753 Metallo-beta-lactamase superfamily BED35_RS17515 PF16123 BED35_RS17515 BED35_RS17520 PF01464 Transglycosylase SLT domain BED35_RS17520 PF01476 LysM domain BED35_RS17525 PF01548 BED35_RS17525 BED35_RS17525 PF02371 BED35_RS17525 BED35_RS17530 PF03372 Endonuclease/Exonuclease/phosphatase family BED35_RS17535 PF07690 Major Facilitator Superfamily BED35_RS17540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS17540 PF03466 LysR substrate binding domain BED35_RS17545 PF00248 Aldo/keto reductase family BED35_RS17550 PF00109 Beta-ketoacyl synthase, N-terminal domain BED35_RS17550 PF02801 Beta-ketoacyl synthase, C-terminal domain BED35_RS17555 PF00872 BED35_RS17555 BED35_RS17590 PF13242 HAD-hyrolase-like BED35_RS17595 PF00005 ABC transporter BED35_RS17595 PF09383 NIL domain BED35_RS17600 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS17605 PF03180 NLPA lipoprotein BED35_RS17610 PF16358 BED35_RS17610 BED35_RS17615 PF01980 Uncharacterised protein family UPF0066 BED35_RS17620 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BED35_RS17620 PF03129 Anticodon binding domain BED35_RS17620 PF04073 Aminoacyl-tRNA editing domain BED35_RS17625 PF04170 NlpE N-terminal domain BED35_RS17625 PF17185 BED35_RS17625 BED35_RS17630 PF00472 RF-1 domain BED35_RS17635 PF07152 YaeQ protein BED35_RS17640 PF06786 BED35_RS17640 BED35_RS17645 PF07073 Modulator of Rho-dependent transcription termination (ROF) BED35_RS17650 PF00034 Cytochrome c BED35_RS17655 PF01171 PP-loop family BED35_RS17655 PF09179 TilS substrate binding domain BED35_RS17655 PF11734 TilS substrate C-terminal domain BED35_RS17660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BED35_RS17665 PF01276 Orn/Lys/Arg decarboxylase, major domain BED35_RS17665 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED35_RS17665 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED35_RS17670 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BED35_RS17675 PF01336 OB-fold nucleic acid binding domain BED35_RS17675 PF02811 PHP domain BED35_RS17675 PF07733 Bacterial DNA polymerase III alpha subunit BED35_RS17675 PF14579 Helix-hairpin-helix motif BED35_RS17680 PF01351 Ribonuclease HII BED35_RS17685 PF02684 BED35_RS17685 BED35_RS17690 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS17690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BED35_RS17695 PF07977 FabA-like domain BED35_RS17700 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS17700 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BED35_RS17705 PF03938 Outer membrane protein (OmpH-like) BED35_RS17710 PF01103 Surface antigen BED35_RS17710 PF07244 Surface antigen variable number repeat BED35_RS17715 PF02163 Peptidase family M50 BED35_RS17715 PF13180 PDZ domain BED35_RS17720 PF01148 Cytidylyltransferase family BED35_RS17725 PF01255 Putative undecaprenyl diphosphate synthase BED35_RS17730 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BED35_RS17730 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal BED35_RS17730 PF13288 DXP reductoisomerase C-terminal domain BED35_RS17735 PF01765 Ribosome recycling factor BED35_RS17740 PF00696 Amino acid kinase family BED35_RS17745 PF00889 Elongation factor TS BED35_RS17750 PF00318 Ribosomal protein S2 BED35_RS17760 PF01842 ACT domain BED35_RS17760 PF01909 Nucleotidyltransferase domain BED35_RS17760 PF01966 HD domain BED35_RS17760 PF08335 GlnD PII-uridylyltransferase BED35_RS17765 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS17765 PF14602 Hexapeptide repeat of succinyl-transferase BED35_RS17765 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BED35_RS17770 PF11944 BED35_RS17770 BED35_RS17775 PF00258 Flavodoxin BED35_RS17780 PF00849 RNA pseudouridylate synthase BED35_RS17785 PF04287 tRNA pseudouridine synthase C BED35_RS17790 PF07348 Syd protein (SUKH-2) BED35_RS17795 PF14489 QueF-like protein BED35_RS17795 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BED35_RS17800 PF03641 Possible lysine decarboxylase BED35_RS17800 PF11892 Domain of unknown function (DUF3412) BED35_RS17800 PF14793 Domain of unknown function (DUF4478) BED35_RS17805 PF01367 5'-3' exonuclease, C-terminal SAM fold BED35_RS17805 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BED35_RS17810 PF01548 BED35_RS17810 BED35_RS17810 PF02371 BED35_RS17810 BED35_RS17815 PF01728 FtsJ-like methyltransferase BED35_RS17820 PF04241 BED35_RS17820 BED35_RS17825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS17825 PF03466 LysR substrate binding domain BED35_RS17830 PF06004 Bacterial protein of unknown function (DUF903) BED35_RS17835 PF00266 Aminotransferase class-V BED35_RS17840 PF02657 Fe-S metabolism associated domain BED35_RS17845 PF00899 ThiF family BED35_RS17850 PF03562 MltA specific insert domain BED35_RS17850 PF06725 3D domain BED35_RS17870 PF01520 N-acetylmuramoyl-L-alanine amidase BED35_RS17870 PF11741 AMIN domain BED35_RS17875 PF00583 Acetyltransferase (GNAT) family BED35_RS17875 PF00696 Amino acid kinase family BED35_RS17880 PF13538 UvrD-like helicase C-terminal domain BED35_RS17880 PF13604 AAA domain BED35_RS17885 PF00580 UvrD/REP helicase N-terminal domain BED35_RS17885 PF12705 PD-(D/E)XK nuclease superfamily BED35_RS17885 PF13361 UvrD-like helicase C-terminal domain BED35_RS17890 PF00675 Insulinase (Peptidase family M16) BED35_RS17890 PF05193 Peptidase M16 inactive domain BED35_RS17890 PF16187 BED35_RS17890 BED35_RS17895 PF04257 Exodeoxyribonuclease V, gamma subunit BED35_RS17900 PF12528 BED35_RS17900 BED35_RS17905 PF10713 BED35_RS17905 BED35_RS17920 PF00303 Thymidylate synthase BED35_RS17925 PF01790 BED35_RS17925 BED35_RS17930 PF00391 PEP-utilising enzyme, mobile domain BED35_RS17930 PF01590 GAF domain BED35_RS17930 PF02896 PEP-utilising enzyme, TIM barrel domain BED35_RS17930 PF05524 PEP-utilising enzyme, N-terminal BED35_RS17935 PF00293 NUDIX domain BED35_RS17945 PF02976 DNA mismatch repair enzyme MutH BED35_RS17950 PF03741 BED35_RS17950 BED35_RS17955 PF00248 Aldo/keto reductase family BED35_RS17965 PF00501 AMP-binding enzyme BED35_RS17965 PF01553 Acyltransferase BED35_RS17970 PF00384 Molybdopterin oxidoreductase BED35_RS17970 PF01568 Molydopterin dinucleotide binding domain BED35_RS17975 PF00356 Bacterial regulatory proteins, lacI family BED35_RS17975 PF13377 Periplasmic binding protein-like domain BED35_RS17980 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BED35_RS17980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BED35_RS17985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS17985 PF03466 LysR substrate binding domain BED35_RS17990 PF07690 Major Facilitator Superfamily BED35_RS17995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS17995 PF03466 LysR substrate binding domain BED35_RS18000 PF00753 Metallo-beta-lactamase superfamily BED35_RS18020 PF00486 Transcriptional regulatory protein, C terminal BED35_RS18025 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) BED35_RS18040 PF05134 Type II secretion system (T2SS), protein L BED35_RS18045 PF03934 Type II secretion system (T2SS), protein K BED35_RS18050 PF11612 Type II secretion system (T2SS), protein J BED35_RS18055 PF02501 Type II secretion system (T2SS), protein I BED35_RS18060 PF08334 Type II secretion system (T2SS), protein G BED35_RS18060 PF13544 BED35_RS18060 BED35_RS18070 PF00437 Type II/IV secretion system protein BED35_RS18075 PF00263 BED35_RS18075 BED35_RS18075 PF03958 Bacterial type II/III secretion system short domain BED35_RS18080 PF11356 Type IV pilus biogenesis BED35_RS18090 PF00484 Carbonic anhydrase BED35_RS18095 PF01638 HxlR-like helix-turn-helix BED35_RS18100 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS18105 PF13591 MerR HTH family regulatory protein BED35_RS18110 PF00226 DnaJ domain BED35_RS18110 PF01556 DnaJ C terminal domain BED35_RS18115 PF01548 BED35_RS18115 BED35_RS18115 PF02371 BED35_RS18115 BED35_RS18120 PF00990 GGDEF domain BED35_RS18120 PF08448 PAS fold BED35_RS18125 PF13474 SnoaL-like domain BED35_RS18130 PF02661 Fic/DOC family BED35_RS18135 PF05930 Prophage CP4-57 regulatory protein (AlpA) BED35_RS18140 PF00872 BED35_RS18140 BED35_RS18145 PF15731 BED35_RS18145 BED35_RS18150 PF15723 BED35_RS18150 BED35_RS18155 PF01381 Helix-turn-helix BED35_RS18160 PF05016 Plasmid stabilisation system protein BED35_RS18165 PF13358 DDE superfamily endonuclease BED35_RS18165 PF13384 Homeodomain-like domain BED35_RS18170 PF00589 Phage integrase family BED35_RS18170 PF02899 Phage integrase, N-terminal SAM-like domain BED35_RS18200 PF03864 Phage major capsid protein E BED35_RS18210 PF13358 DDE superfamily endonuclease BED35_RS18210 PF13384 Homeodomain-like domain BED35_RS18230 PF04851 Type III restriction enzyme, res subunit BED35_RS18245 PF00589 Phage integrase family BED35_RS18255 PF00152 tRNA synthetases class II (D, K and N) BED35_RS18255 PF01336 OB-fold nucleic acid binding domain BED35_RS18260 PF00472 RF-1 domain BED35_RS18260 PF03462 PCRF domain BED35_RS18265 PF01368 DHH family BED35_RS18265 PF02272 DHHA1 domain BED35_RS18270 PF10411 Disulfide bond isomerase protein N-terminus BED35_RS18270 PF13098 Thioredoxin-like domain BED35_RS18275 PF00589 Phage integrase family BED35_RS18275 PF02899 Phage integrase, N-terminal SAM-like domain BED35_RS18280 PF00258 Flavodoxin BED35_RS18285 PF06123 BED35_RS18285 BED35_RS18290 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS18290 PF00672 HAMP domain BED35_RS18290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS18290 PF14827 Sensory domain of two-component sensor kinase BED35_RS18295 PF00072 Response regulator receiver domain BED35_RS18295 PF00486 Transcriptional regulatory protein, C terminal BED35_RS18300 PF07254 BED35_RS18300 BED35_RS18305 PF03937 Flavinator of succinate dehydrogenase BED35_RS18310 PF01571 Aminomethyltransferase folate-binding domain BED35_RS18315 PF01548 BED35_RS18315 BED35_RS18315 PF02371 BED35_RS18315 BED35_RS18320 PF03006 BED35_RS18320 BED35_RS18325 PF13023 HD domain BED35_RS18330 PF13561 Enoyl-(Acyl carrier protein) reductase BED35_RS18335 PF13924 BED35_RS18335 BED35_RS18340 PF02347 Glycine cleavage system P-protein BED35_RS18345 PF01597 Glycine cleavage H-protein BED35_RS18350 PF01571 Aminomethyltransferase folate-binding domain BED35_RS18350 PF08669 Glycine cleavage T-protein C-terminal barrel domain BED35_RS18355 PF01494 FAD binding domain BED35_RS18360 PF01494 FAD binding domain BED35_RS18365 PF00557 Metallopeptidase family M24 BED35_RS18365 PF05195 Aminopeptidase P, N-terminal domain BED35_RS18370 PF03695 Uncharacterised protein family (UPF0149) BED35_RS18375 PF05164 Cell division protein ZapA BED35_RS18385 PF01812 5-formyltetrahydrofolate cyclo-ligase family BED35_RS18390 PF00113 Enolase, C-terminal TIM barrel domain BED35_RS18390 PF03952 Enolase, N-terminal domain BED35_RS18395 PF00117 Glutamine amidotransferase class-I BED35_RS18395 PF06418 CTP synthase N-terminus BED35_RS18400 PF03819 MazG nucleotide pyrophosphohydrolase domain BED35_RS18405 PF02824 TGS domain BED35_RS18405 PF04607 Region found in RelA / SpoT proteins BED35_RS18405 PF13291 ACT domain BED35_RS18405 PF13328 HD domain BED35_RS18410 PF01938 TRAM domain BED35_RS18410 PF05958 tRNA (Uracil-5-)-methyltransferase BED35_RS18415 PF00072 Response regulator receiver domain BED35_RS18415 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS18415 PF00672 HAMP domain BED35_RS18415 PF01627 Hpt domain BED35_RS18415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS18415 PF09984 BED35_RS18415 BED35_RS18420 PF00595 PDZ domain (Also known as DHR or GLGF) BED35_RS18420 PF13180 PDZ domain BED35_RS18420 PF13365 Trypsin-like peptidase domain BED35_RS18425 PF01966 HD domain BED35_RS18425 PF13286 Phosphohydrolase-associated domain BED35_RS18430 PF01048 Phosphorylase superfamily BED35_RS18435 PF01497 Periplasmic binding protein BED35_RS18440 PF03458 BED35_RS18440 BED35_RS18445 PF01521 Iron-sulphur cluster biosynthesis BED35_RS18450 PF00654 Voltage gated chloride channel BED35_RS18455 PF00202 Aminotransferase class-III BED35_RS18460 PF07690 Major Facilitator Superfamily BED35_RS18465 PF01032 FecCD transport family BED35_RS18470 PF01497 Periplasmic binding protein BED35_RS18475 PF00005 ABC transporter BED35_RS18480 PF00905 Penicillin binding protein transpeptidase domain BED35_RS18480 PF00912 Transglycosylase BED35_RS18480 PF14812 BED35_RS18480 BED35_RS18480 PF14814 Bifunctional transglycosylase second domain BED35_RS18485 PF00270 DEAD/DEAH box helicase BED35_RS18485 PF00271 Helicase conserved C-terminal domain BED35_RS18485 PF04408 Helicase associated domain (HA2) BED35_RS18485 PF08482 BED35_RS18485 BED35_RS18490 PF13563 2'-5' RNA ligase superfamily BED35_RS18495 PF03749 Sugar fermentation stimulation protein BED35_RS18500 PF01258 Prokaryotic dksA/traR C4-type zinc finger BED35_RS18505 PF00749 tRNA synthetases class I (E and Q), catalytic domain BED35_RS18510 PF01743 Poly A polymerase head domain BED35_RS18510 PF12626 Polymerase A arginine-rich C-terminus BED35_RS18510 PF12627 Probable RNA and SrmB- binding site of polymerase A BED35_RS18515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BED35_RS18520 PF02548 Ketopantoate hydroxymethyltransferase BED35_RS18525 PF02569 Pantoate-beta-alanine ligase BED35_RS18530 PF02261 Aspartate decarboxylase BED35_RS18535 PF01522 Polysaccharide deacetylase BED35_RS18540 PF01061 BED35_RS18540 BED35_RS18545 PF00005 ABC transporter BED35_RS18550 PF00484 Carbonic anhydrase BED35_RS18555 PF00156 Phosphoribosyl transferase domain BED35_RS18560 PF00394 Multicopper oxidase BED35_RS18560 PF07731 Multicopper oxidase BED35_RS18560 PF07732 Multicopper oxidase BED35_RS18560 PF10518 TAT (twin-arginine translocation) pathway signal sequence BED35_RS18565 PF09691 Bacterial chaperone lipoprotein (PulS_OutS) BED35_RS18570 PF01564 Spermine/spermidine synthase BED35_RS18575 PF02675 S-adenosylmethionine decarboxylase BED35_RS18585 PF00892 EamA-like transporter family BED35_RS18590 PF06062 BED35_RS18590 BED35_RS18595 PF00330 Aconitase family (aconitate hydratase) BED35_RS18595 PF06434 Aconitate hydratase 2 N-terminus BED35_RS18595 PF11791 Aconitate B N-terminal domain BED35_RS18600 PF00593 TonB dependent receptor BED35_RS18600 PF07715 TonB-dependent Receptor Plug Domain BED35_RS18615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED35_RS18615 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED35_RS18620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BED35_RS18620 PF00364 Biotin-requiring enzyme BED35_RS18620 PF02817 e3 binding domain BED35_RS18625 PF00456 Transketolase, thiamine diphosphate binding domain BED35_RS18630 PF00392 Bacterial regulatory proteins, gntR family BED35_RS18630 PF07729 FCD domain BED35_RS18635 PF00324 Amino acid permease BED35_RS18640 PF17113 BED35_RS18640 BED35_RS18645 PF01510 N-acetylmuramoyl-L-alanine amidase BED35_RS18650 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BED35_RS18650 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BED35_RS18655 PF00114 Pilin (bacterial filament) BED35_RS18655 PF13633 Prokaryotic N-terminal methylation site BED35_RS18660 PF00437 Type II/IV secretion system protein BED35_RS18660 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BED35_RS18665 PF00482 Type II secretion system (T2SS), protein F BED35_RS18670 PF00478 IMP dehydrogenase / GMP reductase domain BED35_RS18675 PF01121 Dephospho-CoA kinase BED35_RS18680 PF07072 Protein of unknown function (DUF1342) BED35_RS18685 PF03884 Domain of unknown function (DUF329) BED35_RS18690 PF00293 NUDIX domain BED35_RS18695 PF01043 SecA preprotein cross-linking domain BED35_RS18695 PF02810 SEC-C motif BED35_RS18695 PF07516 SecA Wing and Scaffold domain BED35_RS18695 PF07517 SecA DEAD-like domain BED35_RS18700 PF06558 BED35_RS18700 BED35_RS18705 PF05258 BED35_RS18705 BED35_RS18710 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BED35_RS18715 PF00091 Tubulin/FtsZ family, GTPase domain BED35_RS18715 PF12327 FtsZ family, C-terminal domain BED35_RS18720 PF02491 SHS2 domain inserted in FTSA BED35_RS18720 PF14450 Cell division protein FtsA BED35_RS18725 PF03799 Cell division protein FtsQ BED35_RS18725 PF08478 POTRA domain, FtsQ-type BED35_RS18730 PF01820 D-ala D-ala ligase N-terminus BED35_RS18730 PF07478 D-ala D-ala ligase C-terminus BED35_RS18735 PF01225 Mur ligase family, catalytic domain BED35_RS18735 PF02875 Mur ligase family, glutamate ligase domain BED35_RS18735 PF08245 Mur ligase middle domain BED35_RS18740 PF03033 Glycosyltransferase family 28 N-terminal domain BED35_RS18740 PF04101 Glycosyltransferase family 28 C-terminal domain BED35_RS18745 PF01098 BED35_RS18745 BED35_RS18750 PF02875 Mur ligase family, glutamate ligase domain BED35_RS18750 PF08245 Mur ligase middle domain BED35_RS18755 PF00953 Glycosyl transferase family 4 BED35_RS18755 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BED35_RS18760 PF01225 Mur ligase family, catalytic domain BED35_RS18760 PF02875 Mur ligase family, glutamate ligase domain BED35_RS18760 PF08245 Mur ligase middle domain BED35_RS18765 PF01225 Mur ligase family, catalytic domain BED35_RS18765 PF02875 Mur ligase family, glutamate ligase domain BED35_RS18765 PF08245 Mur ligase middle domain BED35_RS18770 PF00905 Penicillin binding protein transpeptidase domain BED35_RS18770 PF03717 Penicillin-binding Protein dimerisation domain BED35_RS18775 PF04999 BED35_RS18775 BED35_RS18780 PF01795 MraW methylase family BED35_RS18785 PF02381 MraZ protein BED35_RS18790 PF06610 BED35_RS18790 BED35_RS18795 PF00356 Bacterial regulatory proteins, lacI family BED35_RS18795 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED35_RS18800 PF01842 ACT domain BED35_RS18800 PF10369 Small subunit of acetolactate synthase BED35_RS18805 PF00205 Thiamine pyrophosphate enzyme, central domain BED35_RS18805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED35_RS18805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED35_RS18810 PF00501 AMP-binding enzyme BED35_RS18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS18815 PF03466 LysR substrate binding domain BED35_RS18820 PF00682 HMGL-like BED35_RS18820 PF08502 LeuA allosteric (dimerisation) domain BED35_RS18825 PF00180 Isocitrate/isopropylmalate dehydrogenase BED35_RS18830 PF00330 Aconitase family (aconitate hydratase) BED35_RS18835 PF00694 Aconitase C-terminal domain BED35_RS18840 PF01212 Beta-eliminating lyase BED35_RS18850 PF07690 Major Facilitator Superfamily BED35_RS18855 PF01228 Glycine radical BED35_RS18855 PF02901 Pyruvate formate lyase BED35_RS18865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS18865 PF12793 BED35_RS18865 BED35_RS18875 PF13988 BED35_RS18875 BED35_RS18880 PF01547 Bacterial extracellular solute-binding protein BED35_RS18885 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS18890 PF00005 ABC transporter BED35_RS18895 PF09335 BED35_RS18895 BED35_RS18900 PF00136 DNA polymerase family B BED35_RS18900 PF03104 DNA polymerase family B, exonuclease domain BED35_RS18905 PF00176 SNF2 family N-terminal domain BED35_RS18905 PF00271 Helicase conserved C-terminal domain BED35_RS18905 PF12137 RNA polymerase recycling family C-terminal BED35_RS18910 PF02369 Bacterial Ig-like domain (group 1) BED35_RS18910 PF09134 Invasin, domain 3 BED35_RS18910 PF11924 Protein of unknown function (DUF3442) BED35_RS18915 PF00849 RNA pseudouridylate synthase BED35_RS18920 PF00226 DnaJ domain BED35_RS18920 PF05099 Tellurite resistance protein TerB BED35_RS18925 PF03968 OstA-like protein BED35_RS18925 PF04453 Organic solvent tolerance protein BED35_RS18930 PF00639 PPIC-type PPIASE domain BED35_RS18930 PF09312 SurA N-terminal domain BED35_RS18935 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BED35_RS18940 PF00398 Ribosomal RNA adenine dimethylase BED35_RS18945 PF04379 Protein of unknown function (DUF525) BED35_RS18950 PF00149 Calcineurin-like phosphoesterase BED35_RS18955 PF00186 Dihydrofolate reductase BED35_RS18960 PF12821 BED35_RS18960 BED35_RS18965 PF06738 BED35_RS18965 BED35_RS18970 PF01810 BED35_RS18970 BED35_RS18975 PF02142 MGS-like domain BED35_RS18975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BED35_RS18975 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BED35_RS18980 PF00117 Glutamine amidotransferase class-I BED35_RS18980 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BED35_RS18985 PF01113 Dihydrodipicolinate reductase, N-terminus BED35_RS18985 PF05173 Dihydrodipicolinate reductase, C-terminus BED35_RS18990 PF02401 LytB protein BED35_RS18995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED35_RS19000 PF01252 BED35_RS19000 BED35_RS19005 PF00133 tRNA synthetases class I (I, L, M and V) BED35_RS19005 PF06827 Zinc finger found in FPG and IleRS BED35_RS19005 PF08264 Anticodon-binding domain of tRNA BED35_RS19010 PF01687 Riboflavin kinase BED35_RS19010 PF06574 FAD synthetase BED35_RS19020 PF01649 Ribosomal protein S20 BED35_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS19025 PF03466 LysR substrate binding domain BED35_RS19030 PF06965 Na+/H+ antiporter 1 BED35_RS19035 PF00226 DnaJ domain BED35_RS19035 PF00684 DnaJ central domain BED35_RS19035 PF01556 DnaJ C terminal domain BED35_RS19040 PF00012 Hsp70 protein BED35_RS19045 PF01184 BED35_RS19045 BED35_RS19050 PF03995 Peptidase inhibitor family I36 BED35_RS19055 PF07690 Major Facilitator Superfamily BED35_RS19060 PF00994 Probable molybdopterin binding domain BED35_RS19065 PF00923 Transaldolase BED35_RS19070 PF03883 BED35_RS19070 BED35_RS19075 PF01548 BED35_RS19075 BED35_RS19075 PF02371 BED35_RS19075 BED35_RS19080 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS19080 PF14821 Threonine synthase N terminus BED35_RS19085 PF00288 GHMP kinases N terminal domain BED35_RS19085 PF08544 GHMP kinases C terminal BED35_RS19090 PF00696 Amino acid kinase family BED35_RS19090 PF00742 Homoserine dehydrogenase BED35_RS19090 PF01842 ACT domain BED35_RS19090 PF03447 Homoserine dehydrogenase, NAD binding domain BED35_RS19090 PF13840 ACT domain BED35_RS19100 PF00072 Response regulator receiver domain BED35_RS19100 PF00486 Transcriptional regulatory protein, C terminal BED35_RS19105 PF05981 BED35_RS19105 BED35_RS19110 PF06445 GyrI-like small molecule binding domain BED35_RS19110 PF12833 Helix-turn-helix domain BED35_RS19115 PF00300 Histidine phosphatase superfamily (branch 1) BED35_RS19125 PF01371 Trp repressor protein BED35_RS19130 PF01464 Transglycosylase SLT domain BED35_RS19130 PF14718 Soluble lytic murein transglycosylase L domain BED35_RS19135 PF00122 E1-E2 ATPase BED35_RS19135 PF00689 Cation transporting ATPase, C-terminus BED35_RS19135 PF00690 Cation transporter/ATPase, N-terminus BED35_RS19135 PF00702 haloacid dehalogenase-like hydrolase BED35_RS19140 PF13689 BED35_RS19140 BED35_RS19145 PF00990 GGDEF domain BED35_RS19145 PF17152 BED35_RS19145 BED35_RS19150 PF00691 OmpA family BED35_RS19155 PF00005 ABC transporter BED35_RS19155 PF12848 ABC transporter BED35_RS19160 PF02661 Fic/DOC family BED35_RS19160 PF13776 BED35_RS19160 BED35_RS19165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS19165 PF03466 LysR substrate binding domain BED35_RS19170 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS19170 PF13602 Zinc-binding dehydrogenase BED35_RS19180 PF13481 AAA domain BED35_RS19180 PF13541 Subunit ChlI of Mg-chelatase BED35_RS19185 PF12710 haloacid dehalogenase-like hydrolase BED35_RS19190 PF10144 BED35_RS19190 BED35_RS19195 PF01048 Phosphorylase superfamily BED35_RS19200 PF01676 Metalloenzyme superfamily BED35_RS19205 PF00591 Glycosyl transferase family, a/b domain BED35_RS19205 PF02885 Glycosyl transferase family, helical bundle domain BED35_RS19205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BED35_RS19210 PF01791 DeoC/LacD family aldolase BED35_RS19215 PF01773 Na+ dependent nucleoside transporter N-terminus BED35_RS19215 PF07662 Na+ dependent nucleoside transporter C-terminus BED35_RS19215 PF07670 Nucleoside recognition BED35_RS19220 PF01026 TatD related DNase BED35_RS19225 PF01734 Patatin-like phospholipase BED35_RS19230 PF07043 BED35_RS19230 BED35_RS19235 PF04972 BON domain BED35_RS19240 PF00009 Elongation factor Tu GTP binding domain BED35_RS19240 PF03144 Elongation factor Tu domain 2 BED35_RS19240 PF16658 BED35_RS19240 BED35_RS19245 PF13673 Acetyltransferase (GNAT) domain BED35_RS19250 PF03603 DNA polymerase III psi subunit BED35_RS19255 PF05175 Methyltransferase small domain BED35_RS19255 PF08468 Methyltransferase small domain N-terminal BED35_RS19260 PF00248 Aldo/keto reductase family BED35_RS19275 PF07256 BED35_RS19275 BED35_RS19280 PF00990 GGDEF domain BED35_RS19285 PF00593 TonB dependent receptor BED35_RS19285 PF07715 TonB-dependent Receptor Plug Domain BED35_RS19290 PF01497 Periplasmic binding protein BED35_RS19295 PF00294 pfkB family carbohydrate kinase BED35_RS19300 PF02264 LamB porin BED35_RS19300 PF11471 BED35_RS19300 BED35_RS19305 PF00367 phosphotransferase system, EIIB BED35_RS19305 PF02378 Phosphotransferase system, EIIC BED35_RS19310 PF00251 Glycosyl hydrolases family 32 N-terminal domain BED35_RS19315 PF00356 Bacterial regulatory proteins, lacI family BED35_RS19315 PF13377 Periplasmic binding protein-like domain BED35_RS19320 PF00158 Sigma-54 interaction domain BED35_RS19320 PF00989 PAS fold BED35_RS19320 PF02954 Bacterial regulatory protein, Fis family BED35_RS19325 PF01095 Pectinesterase BED35_RS19330 PF10014 2OG-Fe dioxygenase BED35_RS19335 PF07690 Major Facilitator Superfamily BED35_RS19350 PF13358 DDE superfamily endonuclease BED35_RS19350 PF13384 Homeodomain-like domain BED35_RS19355 PF02543 Carbamoyltransferase BED35_RS19355 PF16861 BED35_RS19355 BED35_RS19360 PF00534 Glycosyl transferases group 1 BED35_RS19370 PF02734 DAK2 domain BED35_RS19375 PF02733 Dak1 domain BED35_RS19380 PF00465 Iron-containing alcohol dehydrogenase BED35_RS19385 PF00873 AcrB/AcrD/AcrF family BED35_RS19390 PF16576 BED35_RS19390 BED35_RS19395 PF02274 Amidinotransferase BED35_RS19405 PF04932 BED35_RS19405 BED35_RS19410 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED35_RS19415 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED35_RS19415 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED35_RS19420 PF04198 Putative sugar-binding domain BED35_RS19425 PF00005 ABC transporter BED35_RS19430 PF02653 BED35_RS19430 BED35_RS19435 PF02653 BED35_RS19435 BED35_RS19440 PF13407 Periplasmic binding protein domain BED35_RS19445 PF01791 DeoC/LacD family aldolase BED35_RS19450 PF03992 Antibiotic biosynthesis monooxygenase BED35_RS19460 PF10696 BED35_RS19460 BED35_RS19465 PF00872 BED35_RS19465 BED35_RS19470 PF06551 BED35_RS19470 BED35_RS19475 PF01527 Transposase BED35_RS19495 PF03739 BED35_RS19495 BED35_RS19500 PF03739 BED35_RS19500 BED35_RS19505 PF00883 Cytosol aminopeptidase family, catalytic domain BED35_RS19505 PF02789 Cytosol aminopeptidase family, N-terminal domain BED35_RS19510 PF04364 DNA polymerase III chi subunit, HolC BED35_RS19515 PF00133 tRNA synthetases class I (I, L, M and V) BED35_RS19515 PF08264 Anticodon-binding domain of tRNA BED35_RS19515 PF10458 Valyl tRNA synthetase tRNA binding arm BED35_RS19520 PF00583 Acetyltransferase (GNAT) family BED35_RS19525 PF06877 Regulator of ribonuclease activity B BED35_RS19530 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BED35_RS19530 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BED35_RS19535 PF04074 Domain of unknown function (DUF386) BED35_RS19540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED35_RS19545 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS19550 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS19550 PF12911 BED35_RS19550 BED35_RS19555 PF00005 ABC transporter BED35_RS19560 PF00005 ABC transporter BED35_RS19565 PF03466 LysR substrate binding domain BED35_RS19570 PF03477 ATP cone domain BED35_RS19570 PF13597 Anaerobic ribonucleoside-triphosphate reductase BED35_RS19575 PF13353 4Fe-4S single cluster domain BED35_RS19580 PF08479 POTRA domain, ShlB-type BED35_RS19585 PF15984 BED35_RS19585 BED35_RS19590 PF00392 Bacterial regulatory proteins, gntR family BED35_RS19590 PF07702 UTRA domain BED35_RS19595 PF06754 BED35_RS19595 BED35_RS19600 PF05845 Bacterial phosphonate metabolism protein (PhnH) BED35_RS19605 PF05861 BED35_RS19605 BED35_RS19610 PF06007 BED35_RS19610 BED35_RS19615 PF00005 ABC transporter BED35_RS19620 PF00005 ABC transporter BED35_RS19625 PF07969 Amidohydrolase family BED35_RS19630 PF13238 AAA domain BED35_RS19635 PF12706 Beta-lactamase superfamily domain BED35_RS19645 PF05016 Plasmid stabilisation system protein BED35_RS19650 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BED35_RS19660 PF05426 Alginate lyase BED35_RS19665 PF00005 ABC transporter BED35_RS19665 PF08402 TOBE domain BED35_RS19670 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS19675 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS19680 PF01547 Bacterial extracellular solute-binding protein BED35_RS19685 PF05426 Alginate lyase BED35_RS19690 PF07940 Heparinase II/III-like protein BED35_RS19695 PF01276 Orn/Lys/Arg decarboxylase, major domain BED35_RS19695 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED35_RS19695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED35_RS19700 PF13520 Amino acid permease BED35_RS19710 PF00583 Acetyltransferase (GNAT) family BED35_RS19715 PF02036 SCP-2 sterol transfer family BED35_RS19720 PF01136 BED35_RS19720 BED35_RS19725 PF01136 BED35_RS19725 BED35_RS19730 PF03313 BED35_RS19730 BED35_RS19740 PF02321 Outer membrane efflux protein BED35_RS19740 PF13533 Biotin-lipoyl like BED35_RS19745 PF00296 Luciferase-like monooxygenase BED35_RS19755 PF00270 DEAD/DEAH box helicase BED35_RS19755 PF00271 Helicase conserved C-terminal domain BED35_RS19755 PF03880 DbpA RNA binding domain BED35_RS19755 PF12343 BED35_RS19755 BED35_RS19760 PF07719 Tetratricopeptide repeat BED35_RS19760 PF13181 Tetratricopeptide repeat BED35_RS19765 PF00013 KH domain BED35_RS19765 PF00575 S1 RNA binding domain BED35_RS19765 PF01138 3' exoribonuclease family, domain 1 BED35_RS19765 PF03725 3' exoribonuclease family, domain 2 BED35_RS19765 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BED35_RS19770 PF00312 Ribosomal protein S15 BED35_RS19775 PF01509 TruB family pseudouridylate synthase (N terminal domain) BED35_RS19775 PF09157 Pseudouridine synthase II TruB, C-terminal BED35_RS19775 PF16198 BED35_RS19775 BED35_RS19780 PF02033 Ribosome-binding factor A BED35_RS19785 PF00009 Elongation factor Tu GTP binding domain BED35_RS19785 PF03144 Elongation factor Tu domain 2 BED35_RS19785 PF04760 Translation initiation factor IF-2, N-terminal region BED35_RS19785 PF08364 BED35_RS19785 BED35_RS19785 PF11987 Translation-initiation factor 2 BED35_RS19790 PF08529 NusA N-terminal domain BED35_RS19790 PF13184 NusA-like KH domain BED35_RS19790 PF14520 Helix-hairpin-helix domain BED35_RS19795 PF02576 Uncharacterised BCR, YhbC family COG0779 BED35_RS19810 PF03840 Preprotein translocase SecG subunit BED35_RS19815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BED35_RS19815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BED35_RS19815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BED35_RS19815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BED35_RS19820 PF00809 Pterin binding enzyme BED35_RS19825 PF00004 ATPase family associated with various cellular activities (AAA) BED35_RS19825 PF01434 Peptidase family M41 BED35_RS19825 PF06480 FtsH Extracellular BED35_RS19830 PF01728 FtsJ-like methyltransferase BED35_RS19835 PF01985 CRS1 / YhbY (CRM) domain BED35_RS19840 PF01272 Transcription elongation factor, GreA/GreB, C-term BED35_RS19840 PF03449 Transcription elongation factor, N-terminal BED35_RS19845 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BED35_RS19850 PF00072 Response regulator receiver domain BED35_RS19850 PF00486 Transcriptional regulatory protein, C terminal BED35_RS19855 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS19855 PF00672 HAMP domain BED35_RS19855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS19860 PF01018 GTP1/OBG BED35_RS19860 PF01926 50S ribosome-binding GTPase BED35_RS19865 PF00892 EamA-like transporter family BED35_RS19870 PF01016 Ribosomal L27 protein BED35_RS19875 PF00829 Ribosomal prokaryotic L21 protein BED35_RS19880 PF00348 Polyprenyl synthetase BED35_RS19885 PF02316 Mu DNA-binding domain BED35_RS19890 PF13693 Winged helix-turn-helix DNA-binding BED35_RS19895 PF00056 lactate/malate dehydrogenase, NAD binding domain BED35_RS19895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BED35_RS19900 PF01316 Arginine repressor, DNA binding domain BED35_RS19900 PF02863 Arginine repressor, C-terminal domain BED35_RS19905 PF07338 Protein of unknown function (DUF1471) BED35_RS19910 PF01225 Mur ligase family, catalytic domain BED35_RS19910 PF02875 Mur ligase family, glutamate ligase domain BED35_RS19910 PF08245 Mur ligase middle domain BED35_RS19915 PF00316 Fructose-1-6-bisphosphatase BED35_RS19920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS19920 PF00672 HAMP domain BED35_RS19920 PF02203 Tar ligand binding domain homologue BED35_RS19925 PF00719 Inorganic pyrophosphatase BED35_RS19930 PF06094 AIG2-like family BED35_RS19935 PF04357 BED35_RS19935 BED35_RS19940 PF01103 Surface antigen BED35_RS19940 PF07244 Surface antigen variable number repeat BED35_RS19945 PF01625 Peptide methionine sulfoxide reductase BED35_RS19950 PF00571 CBS domain BED35_RS19950 PF01595 BED35_RS19950 BED35_RS19950 PF03471 Transporter associated domain BED35_RS19955 PF06526 Protein of unknown function (DUF1107) BED35_RS19960 PF09695 BED35_RS19960 BED35_RS19965 PF00459 Inositol monophosphatase family BED35_RS19970 PF00149 Calcineurin-like phosphoesterase BED35_RS19970 PF02872 5'-nucleotidase, C-terminal domain BED35_RS19980 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED35_RS19980 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BED35_RS19985 PF04225 Opacity-associated protein A LysM-like domain BED35_RS19985 PF08525 BED35_RS19985 BED35_RS19990 PF12582 BED35_RS19990 BED35_RS19995 PF01281 Ribosomal protein L9, N-terminal domain BED35_RS19995 PF03948 Ribosomal protein L9, C-terminal domain BED35_RS20000 PF01084 Ribosomal protein S18 BED35_RS20005 PF00436 Single-strand binding protein family BED35_RS20010 PF01250 Ribosomal protein S6 BED35_RS20015 PF07338 Protein of unknown function (DUF1471) BED35_RS20020 PF00326 Prolyl oligopeptidase family BED35_RS20025 PF07338 Protein of unknown function (DUF1471) BED35_RS20030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BED35_RS20035 PF01548 BED35_RS20035 BED35_RS20035 PF02371 BED35_RS20035 BED35_RS20040 PF00588 SpoU rRNA Methylase family BED35_RS20040 PF08032 RNA 2'-O ribose methyltransferase substrate binding BED35_RS20045 PF00575 S1 RNA binding domain BED35_RS20045 PF00773 RNB domain BED35_RS20045 PF08206 Ribonuclease B OB domain BED35_RS20045 PF08461 Ribonuclease R winged-helix domain BED35_RS20050 PF02082 Transcriptional regulator BED35_RS20055 PF00709 Adenylosuccinate synthetase BED35_RS20060 PF09838 BED35_RS20060 BED35_RS20065 PF01145 SPFH domain / Band 7 family BED35_RS20070 PF01145 SPFH domain / Band 7 family BED35_RS20070 PF12221 BED35_RS20070 BED35_RS20075 PF01926 50S ribosome-binding GTPase BED35_RS20075 PF13167 BED35_RS20075 BED35_RS20075 PF16360 BED35_RS20075 BED35_RS20085 PF01715 IPP transferase BED35_RS20090 PF01119 DNA mismatch repair protein, C-terminal domain BED35_RS20090 PF08676 MutL C terminal dimerisation domain BED35_RS20090 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS20095 PF01476 LysM domain BED35_RS20095 PF01520 N-acetylmuramoyl-L-alanine amidase BED35_RS20095 PF11741 AMIN domain BED35_RS20100 PF02367 Uncharacterised P-loop hydrolase UPF0079 BED35_RS20105 PF01256 Carbohydrate kinase BED35_RS20105 PF03853 YjeF-related protein N-terminus BED35_RS20110 PF08331 BED35_RS20110 BED35_RS20110 PF13484 BED35_RS20110 BED35_RS20125 PF00929 Exonuclease BED35_RS20130 PF03193 Protein of unknown function, DUF258 BED35_RS20135 PF02666 BED35_RS20135 BED35_RS20140 PF00924 Mechanosensitive ion channel BED35_RS20140 PF12794 BED35_RS20140 BED35_RS20140 PF12795 BED35_RS20140 BED35_RS20145 PF00152 tRNA synthetases class II (D, K and N) BED35_RS20150 PF00890 FAD binding domain BED35_RS20150 PF02910 Fumarate reductase flavoprotein C-term BED35_RS20155 PF13085 2Fe-2S iron-sulfur cluster binding domain BED35_RS20155 PF13183 4Fe-4S dicluster domain BED35_RS20160 PF02300 Fumarate reductase subunit C BED35_RS20165 PF02313 Fumarate reductase subunit D BED35_RS20170 PF08212 Lipocalin-like domain BED35_RS20175 PF00893 Small Multidrug Resistance protein BED35_RS20180 PF08085 BED35_RS20180 BED35_RS20185 PF01132 Elongation factor P (EF-P) OB domain BED35_RS20185 PF08207 Elongation factor P (EF-P) KOW-like domain BED35_RS20185 PF09285 Elongation factor P, C-terminal BED35_RS20190 PF04055 Radical SAM superfamily BED35_RS20190 PF13353 4Fe-4S single cluster domain BED35_RS20195 PF13698 BED35_RS20195 BED35_RS20205 PF00118 TCP-1/cpn60 chaperonin family BED35_RS20210 PF00166 Chaperonin 10 Kd subunit BED35_RS20215 PF04186 BED35_RS20215 BED35_RS20220 PF00206 Lyase BED35_RS20220 PF10415 Fumarase C C-terminus BED35_RS20225 PF03605 BED35_RS20225 BED35_RS20230 PF03091 CutA1 divalent ion tolerance protein BED35_RS20235 PF02683 BED35_RS20235 BED35_RS20235 PF11412 Disulphide bond corrector protein DsbC BED35_RS20235 PF13899 Thioredoxin-like BED35_RS20240 PF02595 Glycerate kinase family BED35_RS20245 PF00440 Bacterial regulatory proteins, tetR family BED35_RS20255 PF01228 Glycine radical BED35_RS20255 PF02901 Pyruvate formate lyase BED35_RS20260 PF00871 Acetokinase family BED35_RS20265 PF01490 BED35_RS20265 BED35_RS20270 PF00291 Pyridoxal-phosphate dependent enzyme BED35_RS20275 PF04055 Radical SAM superfamily BED35_RS20280 PF06228 Haem utilisation ChuX/HutX BED35_RS20285 PF13460 NADH(P)-binding BED35_RS20290 PF10636 Hemin uptake protein hemP BED35_RS20295 PF00593 TonB dependent receptor BED35_RS20295 PF07715 TonB-dependent Receptor Plug Domain BED35_RS20300 PF05171 Haemin-degrading HemS BED35_RS20305 PF01497 Periplasmic binding protein BED35_RS20310 PF01032 FecCD transport family BED35_RS20315 PF00005 ABC transporter BED35_RS20325 PF06568 BED35_RS20325 BED35_RS20330 PF00593 TonB dependent receptor BED35_RS20330 PF07715 TonB-dependent Receptor Plug Domain BED35_RS20340 PF06769 Plasmid encoded toxin Txe BED35_RS20345 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BED35_RS20355 PF00005 ABC transporter BED35_RS20355 PF06472 BED35_RS20355 BED35_RS20360 PF07660 Secretin and TonB N terminus short domain BED35_RS20360 PF07715 TonB-dependent Receptor Plug Domain BED35_RS20365 PF04773 FecR protein BED35_RS20365 PF16220 BED35_RS20365 BED35_RS20370 PF04542 Sigma-70 region 2 BED35_RS20370 PF08281 Sigma-70, region 4 BED35_RS20380 PF01206 Sulfurtransferase TusA BED35_RS20385 PF04143 BED35_RS20385 BED35_RS20390 PF01312 FlhB HrpN YscU SpaS Family BED35_RS20395 PF01311 BED35_RS20395 BED35_RS20400 PF01313 BED35_RS20400 BED35_RS20405 PF00813 BED35_RS20405 BED35_RS20410 PF01052 Surface presentation of antigens (SPOA) BED35_RS20410 PF06622 BED35_RS20410 BED35_RS20425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED35_RS20430 PF00771 FHIPEP family BED35_RS20440 PF07201 HrpJ-like domain BED35_RS20440 PF09059 TyeA BED35_RS20445 PF03179 Vacuolar (H+)-ATPase G subunit BED35_RS20450 PF13327 BED35_RS20450 BED35_RS20455 PF01514 Secretory protein of YscJ/FliF family BED35_RS20465 PF06287 BED35_RS20465 BED35_RS20470 PF09392 Type III secretion needle MxiH like BED35_RS20475 PF12833 Helix-turn-helix domain BED35_RS20490 PF09621 BED35_RS20490 BED35_RS20495 PF05802 BED35_RS20495 BED35_RS20500 PF04888 BED35_RS20500 BED35_RS20510 PF03433 EspA-like secreted protein BED35_RS20520 PF08988 Protein of unknown function (DUF1895) BED35_RS20525 PF16693 BED35_RS20525 BED35_RS20530 PF00263 BED35_RS20530 BED35_RS20530 PF03958 Bacterial type II/III secretion system short domain BED35_RS20545 PF00072 Response regulator receiver domain BED35_RS20545 PF00196 Bacterial regulatory proteins, luxR family BED35_RS20550 PF00375 Sodium:dicarboxylate symporter family BED35_RS20555 PF00501 AMP-binding enzyme BED35_RS20555 PF13193 AMP-binding enzyme C-terminal domain BED35_RS20555 PF16177 BED35_RS20555 BED35_RS20560 PF04341 BED35_RS20560 BED35_RS20565 PF00474 Sodium:solute symporter family BED35_RS20610 PF01808 AICARFT/IMPCHase bienzyme BED35_RS20610 PF02142 MGS-like domain BED35_RS20615 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BED35_RS20615 PF02843 Phosphoribosylglycinamide synthetase, C domain BED35_RS20615 PF02844 Phosphoribosylglycinamide synthetase, N domain BED35_RS20620 PF07356 BED35_RS20620 BED35_RS20625 PF00216 Bacterial DNA-binding protein BED35_RS20630 PF04222 Protein of unknown function (DUF416) BED35_RS20635 PF04493 Endonuclease V BED35_RS20640 PF01208 Uroporphyrinogen decarboxylase (URO-D) BED35_RS20645 PF00293 NUDIX domain BED35_RS20645 PF09297 NADH pyrophosphatase zinc ribbon domain BED35_RS20650 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BED35_RS20655 PF01964 ThiC family BED35_RS20655 PF13667 ThiC-associated domain BED35_RS20660 PF02581 Thiamine monophosphate synthase/TENI BED35_RS20665 PF00899 ThiF family BED35_RS20670 PF02597 ThiS family BED35_RS20675 PF05690 Thiazole biosynthesis protein ThiG BED35_RS20680 PF04055 Radical SAM superfamily BED35_RS20680 PF06968 Biotin and Thiamin Synthesis associated domain BED35_RS20685 PF01548 BED35_RS20685 BED35_RS20685 PF02371 BED35_RS20685 BED35_RS20690 PF00623 RNA polymerase Rpb1, domain 2 BED35_RS20690 PF04983 RNA polymerase Rpb1, domain 3 BED35_RS20690 PF04997 RNA polymerase Rpb1, domain 1 BED35_RS20690 PF04998 RNA polymerase Rpb1, domain 5 BED35_RS20690 PF05000 RNA polymerase Rpb1, domain 4 BED35_RS20695 PF00562 RNA polymerase Rpb2, domain 6 BED35_RS20695 PF04560 RNA polymerase Rpb2, domain 7 BED35_RS20695 PF04561 RNA polymerase Rpb2, domain 2 BED35_RS20695 PF04563 RNA polymerase beta subunit BED35_RS20695 PF04565 RNA polymerase Rpb2, domain 3 BED35_RS20695 PF10385 RNA polymerase beta subunit external 1 domain BED35_RS20700 PF00542 Ribosomal protein L7/L12 C-terminal domain BED35_RS20700 PF16320 BED35_RS20700 BED35_RS20705 PF00466 Ribosomal protein L10 BED35_RS20710 PF00687 Ribosomal protein L1p/L10e family BED35_RS20715 PF00298 Ribosomal protein L11, RNA binding domain BED35_RS20715 PF03946 Ribosomal protein L11, N-terminal domain BED35_RS20720 PF00467 KOW motif BED35_RS20720 PF02357 Transcription termination factor nusG BED35_RS20725 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BED35_RS20730 PF00009 Elongation factor Tu GTP binding domain BED35_RS20730 PF03143 Elongation factor Tu C-terminal domain BED35_RS20730 PF03144 Elongation factor Tu domain 2 BED35_RS20765 PF00485 Phosphoribulokinase / Uridine kinase family BED35_RS20770 PF02237 Biotin protein ligase C terminal domain BED35_RS20770 PF03099 Biotin/lipoate A/B protein ligase family BED35_RS20770 PF08279 HTH domain BED35_RS20775 PF01565 FAD binding domain BED35_RS20775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BED35_RS20780 PF02371 BED35_RS20780 BED35_RS20785 PF13518 Helix-turn-helix domain BED35_RS20810 PF12724 Flavodoxin domain BED35_RS20815 PF02386 Cation transport protein BED35_RS20820 PF01205 Uncharacterized protein family UPF0029 BED35_RS20820 PF09186 Domain of unknown function (DUF1949) BED35_RS20825 PF00557 Metallopeptidase family M24 BED35_RS20830 PF00378 Enoyl-CoA hydratase/isomerase family BED35_RS20830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BED35_RS20830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BED35_RS20835 PF00108 Thiolase, N-terminal domain BED35_RS20835 PF02803 Thiolase, C-terminal domain BED35_RS20840 PF00175 Oxidoreductase NAD-binding domain BED35_RS20840 PF00970 Oxidoreductase FAD-binding domain BED35_RS20845 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BED35_RS20850 PF02357 Transcription termination factor nusG BED35_RS20855 PF00490 Delta-aminolevulinic acid dehydratase BED35_RS20860 PF01026 TatD related DNase BED35_RS20865 PF00902 Sec-independent protein translocase protein (TatC) BED35_RS20875 PF02416 mttA/Hcf106 family BED35_RS20880 PF03109 BED35_RS20880 BED35_RS20885 PF02036 SCP-2 sterol transfer family BED35_RS20890 PF01209 ubiE/COQ5 methyltransferase family BED35_RS20900 PF09335 BED35_RS20900 BED35_RS20905 PF02554 BED35_RS20905 BED35_RS20905 PF13722 BED35_RS20905 BED35_RS20910 PF13350 Tyrosine phosphatase family BED35_RS20915 PF01048 Phosphorylase superfamily BED35_RS20920 PF01738 Dienelactone hydrolase family BED35_RS20925 PF01717 Cobalamin-independent synthase, Catalytic domain BED35_RS20925 PF08267 Cobalamin-independent synthase, N-terminal domain BED35_RS20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED35_RS20930 PF03466 LysR substrate binding domain BED35_RS20935 PF00892 EamA-like transporter family BED35_RS20940 PF03547 BED35_RS20940 BED35_RS20945 PF03009 Glycerophosphoryl diester phosphodiesterase family BED35_RS20950 PF00005 ABC transporter BED35_RS20950 PF08402 TOBE domain BED35_RS20955 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS20960 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS20965 PF13416 Bacterial extracellular solute-binding protein BED35_RS20970 PF04449 CS1 type fimbrial major subunit BED35_RS20975 PF16967 BED35_RS20975 BED35_RS20980 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS21000 PF00005 ABC transporter BED35_RS21005 PF00005 ABC transporter BED35_RS21005 PF12399 Branched-chain amino acid ATP-binding cassette transporter BED35_RS21010 PF02653 BED35_RS21010 BED35_RS21010 PF11862 BED35_RS21010 BED35_RS21015 PF02653 BED35_RS21015 BED35_RS21020 PF13458 Periplasmic binding protein BED35_RS21025 PF12568 Acetyltransferase (GNAT) domain BED35_RS21040 PF00140 Sigma-70 factor, region 1 BED35_RS21040 PF04542 Sigma-70 region 2 BED35_RS21040 PF04545 Sigma-70, region 4 BED35_RS21045 PF02687 BED35_RS21045 BED35_RS21050 PF00005 ABC transporter BED35_RS21055 PF00448 SRP54-type protein, GTPase domain BED35_RS21055 PF02881 SRP54-type protein, helical bundle domain BED35_RS21060 PF03602 Conserved hypothetical protein 95 BED35_RS21065 PF06611 BED35_RS21065 BED35_RS21070 PF10694 Protein of unknown function (DUF2500) BED35_RS21075 PF08850 BED35_RS21075 BED35_RS21080 PF07947 BED35_RS21080 BED35_RS21085 PF00122 E1-E2 ATPase BED35_RS21085 PF00403 Heavy-metal-associated domain BED35_RS21085 PF00702 haloacid dehalogenase-like hydrolase BED35_RS21090 PF01206 Sulfurtransferase TusA BED35_RS21095 PF02592 BED35_RS21095 BED35_RS21100 PF08786 Domain of unknown function (DUF1795) BED35_RS21105 PF02754 BED35_RS21105 BED35_RS21105 PF13183 4Fe-4S dicluster domain BED35_RS21110 PF00890 FAD binding domain BED35_RS21115 PF01266 FAD dependent oxidoreductase BED35_RS21115 PF04324 BFD-like [2Fe-2S] binding domain BED35_RS21120 PF07690 Major Facilitator Superfamily BED35_RS21125 PF03009 Glycerophosphoryl diester phosphodiesterase family BED35_RS21130 PF08282 haloacid dehalogenase-like hydrolase BED35_RS21135 PF12146 Putative lysophospholipase BED35_RS21140 PF01810 BED35_RS21140 BED35_RS21145 PF01810 BED35_RS21145 BED35_RS21150 PF00270 DEAD/DEAH box helicase BED35_RS21150 PF00271 Helicase conserved C-terminal domain BED35_RS21150 PF00570 HRDC domain BED35_RS21150 PF09382 RQC domain BED35_RS21150 PF16124 BED35_RS21150 BED35_RS21155 PF02253 Phospholipase A1 BED35_RS21160 PF03061 Thioesterase superfamily BED35_RS21165 PF00892 EamA-like transporter family BED35_RS21170 PF01544 CorA-like Mg2+ transporter protein BED35_RS21175 PF09370 TIM-barrel signal transduction protein BED35_RS21180 PF06792 Uncharacterised protein family (UPF0261) BED35_RS21185 PF00440 Bacterial regulatory proteins, tetR family BED35_RS21190 PF00580 UvrD/REP helicase N-terminal domain BED35_RS21190 PF13361 UvrD-like helicase C-terminal domain BED35_RS21195 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS21200 PF00589 Phage integrase family BED35_RS21200 PF02899 Phage integrase, N-terminal SAM-like domain BED35_RS21205 PF04340 Protein of unknown function, DUF484 BED35_RS21210 PF01678 Diaminopimelate epimerase BED35_RS21215 PF13627 BED35_RS21215 BED35_RS21220 PF01491 Frataxin-like domain BED35_RS21225 PF13454 FAD-NAD(P)-binding BED35_RS21230 PF01295 BED35_RS21230 BED35_RS21230 PF12633 BED35_RS21230 BED35_RS21235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BED35_RS21235 PF03900 Porphobilinogen deaminase, C-terminal domain BED35_RS21240 PF02602 Uroporphyrinogen-III synthase HemD BED35_RS21245 PF04375 BED35_RS21245 BED35_RS21250 PF07219 BED35_RS21250 BED35_RS21255 PF01548 BED35_RS21255 BED35_RS21255 PF02371 BED35_RS21255 BED35_RS21285 PF03808 BED35_RS21285 BED35_RS21290 PF06899 BED35_RS21290 BED35_RS21295 PF07429 BED35_RS21295 BED35_RS21300 PF01943 BED35_RS21300 BED35_RS21305 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BED35_RS21310 PF00583 Acetyltransferase (GNAT) family BED35_RS21315 PF00483 Nucleotidyl transferase BED35_RS21320 PF16363 BED35_RS21320 BED35_RS21325 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BED35_RS21325 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BED35_RS21325 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BED35_RS21330 PF02350 UDP-N-acetylglucosamine 2-epimerase BED35_RS21335 PF02706 Chain length determinant protein BED35_RS21340 PF00953 Glycosyl transferase family 4 BED35_RS21345 PF01548 BED35_RS21345 BED35_RS21345 PF02371 BED35_RS21345 BED35_RS21350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED35_RS21350 PF07497 Rho termination factor, RNA-binding domain BED35_RS21350 PF07498 Rho termination factor, N-terminal domain BED35_RS21355 PF00085 Thioredoxin BED35_RS21360 PF00270 DEAD/DEAH box helicase BED35_RS21360 PF00271 Helicase conserved C-terminal domain BED35_RS21365 PF02541 Ppx/GppA phosphatase family BED35_RS21370 PF00295 Glycosyl hydrolases family 28 BED35_RS21375 PF00580 UvrD/REP helicase N-terminal domain BED35_RS21375 PF13361 UvrD-like helicase C-terminal domain BED35_RS21380 PF13616 PPIC-type PPIASE domain BED35_RS21385 PF00419 Fimbrial protein BED35_RS21390 PF13358 DDE superfamily endonuclease BED35_RS21390 PF13384 Homeodomain-like domain BED35_RS21395 PF08843 Nucleotidyl transferase of unknown function (DUF1814) BED35_RS21410 PF02661 Fic/DOC family BED35_RS21410 PF13784 Fic/DOC family N-terminal BED35_RS21415 PF03288 Poxvirus D5 protein-like BED35_RS21415 PF08273 Zinc-binding domain of primase-helicase BED35_RS21415 PF08706 BED35_RS21415 BED35_RS21415 PF13362 Toprim domain BED35_RS21420 PF05973 BED35_RS21420 BED35_RS21425 PF05930 Prophage CP4-57 regulatory protein (AlpA) BED35_RS21445 PF00589 Phage integrase family BED35_RS21445 PF13356 Domain of unknown function (DUF4102) BED35_RS21450 PF12833 Helix-turn-helix domain BED35_RS21450 PF13377 Periplasmic binding protein-like domain BED35_RS21455 PF02653 BED35_RS21455 BED35_RS21460 PF00005 ABC transporter BED35_RS21465 PF13407 Periplasmic binding protein domain BED35_RS21475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED35_RS21475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED35_RS21480 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED35_RS21480 PF02753 Pili assembly chaperone PapD, C-terminal domain BED35_RS21485 PF00857 Isochorismatase family BED35_RS21490 PF01965 DJ-1/PfpI family BED35_RS21490 PF12833 Helix-turn-helix domain BED35_RS21495 PF01757 BED35_RS21495 BED35_RS21500 PF07690 Major Facilitator Superfamily BED35_RS21505 PF00009 Elongation factor Tu GTP binding domain BED35_RS21505 PF09106 Elongation factor SelB, winged helix BED35_RS21505 PF09107 Elongation factor SelB, winged helix BED35_RS21510 PF03841 L-seryl-tRNA selenium transferase BED35_RS21510 PF12390 BED35_RS21510 BED35_RS21515 PF04216 Protein involved in formate dehydrogenase formation BED35_RS21520 PF01292 Prokaryotic cytochrome b561 BED35_RS21525 PF09163 Formate dehydrogenase N, transmembrane BED35_RS21525 PF13247 4Fe-4S dicluster domain BED35_RS21530 PF00384 Molybdopterin oxidoreductase BED35_RS21530 PF01568 Molydopterin dinucleotide binding domain BED35_RS21535 PF00384 Molybdopterin oxidoreductase BED35_RS21535 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS21540 PF02634 FdhD/NarQ family BED35_RS21545 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BED35_RS21545 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BED35_RS21550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS21550 PF00672 HAMP domain BED35_RS21550 PF16591 BED35_RS21550 BED35_RS21555 PF03473 MOSC domain BED35_RS21555 PF03475 3-alpha domain BED35_RS21560 PF01850 PIN domain BED35_RS21565 PF04014 Antidote-toxin recognition MazE BED35_RS21570 PF10928 Protein of unknown function (DUF2810) BED35_RS21575 PF00155 Aminotransferase class I and II BED35_RS21575 PF00392 Bacterial regulatory proteins, gntR family BED35_RS21580 PF01810 BED35_RS21580 BED35_RS21585 PF05068 Mannitol repressor BED35_RS21590 PF01232 Mannitol dehydrogenase Rossmann domain BED35_RS21590 PF08125 Mannitol dehydrogenase C-terminal domain BED35_RS21595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED35_RS21595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED35_RS21595 PF02378 Phosphotransferase system, EIIC BED35_RS21600 PF11254 BED35_RS21600 BED35_RS21605 PF02092 BED35_RS21605 BED35_RS21605 PF05746 DALR anticodon binding domain BED35_RS21610 PF02091 Glycyl-tRNA synthetase alpha subunit BED35_RS21615 PF03352 Methyladenine glycosylase BED35_RS21620 PF13673 Acetyltransferase (GNAT) domain BED35_RS21630 PF08964 Beta/Gamma crystallin BED35_RS21645 PF07690 Major Facilitator Superfamily BED35_RS21650 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED35_RS21650 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED35_RS21655 PF00128 Alpha amylase, catalytic domain BED35_RS21655 PF17143 BED35_RS21655 BED35_RS21660 PF00155 Aminotransferase class I and II BED35_RS21665 PF02080 TrkA-C domain BED35_RS21665 PF06826 BED35_RS21665 BED35_RS21670 PF01548 BED35_RS21670 BED35_RS21670 PF02371 BED35_RS21670 BED35_RS21675 PF07690 Major Facilitator Superfamily BED35_RS21690 PF00175 Oxidoreductase NAD-binding domain BED35_RS21690 PF00970 Oxidoreductase FAD-binding domain BED35_RS21695 PF05656 BED35_RS21695 BED35_RS21700 PF07305 BED35_RS21700 BED35_RS21705 PF00121 Triosephosphate isomerase BED35_RS21710 PF15644 Papain fold toxin 1 BED35_RS21715 PF13531 Bacterial extracellular solute-binding protein BED35_RS21720 PF00365 Phosphofructokinase BED35_RS21725 PF01545 Cation efflux family BED35_RS21725 PF16916 BED35_RS21725 BED35_RS21730 PF07813 LTXXQ motif family protein BED35_RS21735 PF00072 Response regulator receiver domain BED35_RS21735 PF00486 Transcriptional regulatory protein, C terminal BED35_RS21740 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS21740 PF00672 HAMP domain BED35_RS21740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS21740 PF16527 BED35_RS21740 BED35_RS21745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BED35_RS21745 PF02805 Metal binding domain of Ada BED35_RS21745 PF12833 Helix-turn-helix domain BED35_RS21750 PF00588 SpoU rRNA Methylase family BED35_RS21755 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS21755 PF06426 Serine acetyltransferase, N-terminal BED35_RS21760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BED35_RS21760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BED35_RS21765 PF02556 Preprotein translocase subunit SecB BED35_RS21770 PF00462 Glutaredoxin BED35_RS21775 PF00581 Rhodanese-like domain BED35_RS21780 PF01676 Metalloenzyme superfamily BED35_RS21780 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BED35_RS21785 PF01551 Peptidase family M23 BED35_RS21790 PF04748 Divergent polysaccharide deacetylase BED35_RS21805 PF00107 Zinc-binding dehydrogenase BED35_RS21805 PF08240 Alcohol dehydrogenase GroES-like domain BED35_RS21810 PF00155 Aminotransferase class I and II BED35_RS21815 PF01370 NAD dependent epimerase/dehydratase family BED35_RS21820 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED35_RS21825 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED35_RS21830 PF00534 Glycosyl transferases group 1 BED35_RS21830 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BED35_RS21835 PF00535 Glycosyl transferase family 2 BED35_RS21840 PF01467 Cytidylyltransferase BED35_RS21845 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BED35_RS21845 PF06827 Zinc finger found in FPG and IleRS BED35_RS21845 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BED35_RS21850 PF00471 Ribosomal protein L33 BED35_RS21855 PF00830 Ribosomal L28 family BED35_RS21860 PF04002 RadC-like JAB domain BED35_RS21865 PF02441 Flavoprotein BED35_RS21865 PF04127 DNA / pantothenate metabolism flavoprotein BED35_RS21870 PF00692 dUTPase BED35_RS21875 PF00440 Bacterial regulatory proteins, tetR family BED35_RS21880 PF00156 Phosphoribosyl transferase domain BED35_RS21885 PF01138 3' exoribonuclease family, domain 1 BED35_RS21885 PF03725 3' exoribonuclease family, domain 2 BED35_RS21890 PF03755 BED35_RS21890 BED35_RS21890 PF08340 BED35_RS21890 BED35_RS21895 PF00589 Phage integrase family BED35_RS21895 PF13356 Domain of unknown function (DUF4102) BED35_RS21905 PF05930 Prophage CP4-57 regulatory protein (AlpA) BED35_RS21915 PF08346 BED35_RS21915 BED35_RS21935 PF13973 BED35_RS21935 BED35_RS21945 PF06048 BED35_RS21945 BED35_RS21945 PF08273 Zinc-binding domain of primase-helicase BED35_RS21945 PF13362 Toprim domain BED35_RS21980 PF04326 Divergent AAA domain BED35_RS21985 PF00753 Metallo-beta-lactamase superfamily BED35_RS21995 PF00563 EAL domain BED35_RS21995 PF00990 GGDEF domain BED35_RS21995 PF13426 PAS domain BED35_RS22000 PF00378 Enoyl-CoA hydratase/isomerase family BED35_RS22005 PF01773 Na+ dependent nucleoside transporter N-terminus BED35_RS22005 PF07662 Na+ dependent nucleoside transporter C-terminus BED35_RS22010 PF13358 DDE superfamily endonuclease BED35_RS22010 PF13384 Homeodomain-like domain BED35_RS22020 PF03458 BED35_RS22020 BED35_RS22030 PF00625 Guanylate kinase BED35_RS22035 PF01192 RNA polymerase Rpb6 BED35_RS22040 PF02824 TGS domain BED35_RS22040 PF04607 Region found in RelA / SpoT proteins BED35_RS22040 PF13291 ACT domain BED35_RS22040 PF13328 HD domain BED35_RS22045 PF00588 SpoU rRNA Methylase family BED35_RS22045 PF12105 SpoU, rRNA methylase, C-terminal BED35_RS22050 PF00270 DEAD/DEAH box helicase BED35_RS22050 PF00271 Helicase conserved C-terminal domain BED35_RS22050 PF17191 BED35_RS22050 BED35_RS22055 PF03616 BED35_RS22055 BED35_RS22060 PF00860 Permease family BED35_RS22070 PF00196 Bacterial regulatory proteins, luxR family BED35_RS22070 PF08448 PAS fold BED35_RS22075 PF00196 Bacterial regulatory proteins, luxR family BED35_RS22075 PF08448 PAS fold BED35_RS22080 PF13693 Winged helix-turn-helix DNA-binding BED35_RS22085 PF00583 Acetyltransferase (GNAT) family BED35_RS22085 PF09500 Putative thioesterase (yiiD_Cterm) BED35_RS22090 PF02580 D-Tyr-tRNA(Tyr) deacylase BED35_RS22095 PF03631 BED35_RS22095 BED35_RS22100 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS22105 PF00009 Elongation factor Tu GTP binding domain BED35_RS22105 PF00679 Elongation factor G C-terminus BED35_RS22105 PF03144 Elongation factor Tu domain 2 BED35_RS22110 PF00120 Glutamine synthetase, catalytic domain BED35_RS22110 PF03951 Glutamine synthetase, beta-Grasp domain BED35_RS22120 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS22120 PF00989 PAS fold BED35_RS22120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS22125 PF00072 Response regulator receiver domain BED35_RS22125 PF00158 Sigma-54 interaction domain BED35_RS22125 PF02954 Bacterial regulatory protein, Fis family BED35_RS22130 PF04055 Radical SAM superfamily BED35_RS22130 PF06969 HemN C-terminal domain BED35_RS22135 PF04220 BED35_RS22135 BED35_RS22140 PF01926 50S ribosome-binding GTPase BED35_RS22145 PF00476 DNA polymerase family A BED35_RS22145 PF01367 5'-3' exonuclease, C-terminal SAM fold BED35_RS22145 PF01612 3'-5' exonuclease BED35_RS22145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BED35_RS22150 PF01323 DSBA-like thioredoxin domain BED35_RS22155 PF01636 Phosphotransferase enzyme family BED35_RS22160 PF06288 Protein of unknown function (DUF1040) BED35_RS22165 PF12804 MobA-like NTP transferase domain BED35_RS22170 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BED35_RS22175 PF00665 Integrase core domain BED35_RS22180 PF13518 Helix-turn-helix domain BED35_RS22205 PF00392 Bacterial regulatory proteins, gntR family BED35_RS22205 PF07729 FCD domain BED35_RS22215 PF00356 Bacterial regulatory proteins, lacI family BED35_RS22215 PF13377 Periplasmic binding protein-like domain BED35_RS22220 PF00294 pfkB family carbohydrate kinase BED35_RS22225 PF13407 Periplasmic binding protein domain BED35_RS22230 PF02653 BED35_RS22230 BED35_RS22235 PF00005 ABC transporter BED35_RS22240 PF05025 RbsD / FucU transport protein family BED35_RS22245 PF02705 BED35_RS22245 BED35_RS22250 PF07728 AAA domain (dynein-related subfamily) BED35_RS22250 PF12592 Protein of unknown function (DUF3763) BED35_RS22255 PF05762 VWA domain containing CoxE-like protein BED35_RS22260 PF07077 BED35_RS22260 BED35_RS22265 PF03590 Aspartate-ammonia ligase BED35_RS22270 PF01037 AsnC family BED35_RS22270 PF13404 AsnC-type helix-turn-helix domain BED35_RS22275 PF00258 Flavodoxin BED35_RS22280 PF01134 Glucose inhibited division protein A BED35_RS22280 PF13932 GidA associated domain 3 BED35_RS22285 PF02527 rRNA small subunit methyltransferase G BED35_RS22290 PF03899 BED35_RS22290 BED35_RS22295 PF00119 ATP synthase A chain BED35_RS22300 PF00137 ATP synthase subunit C BED35_RS22305 PF00430 ATP synthase B/B' CF(0) BED35_RS22310 PF00213 ATP synthase delta (OSCP) subunit BED35_RS22315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED35_RS22315 PF00306 ATP synthase alpha/beta chain, C terminal domain BED35_RS22315 PF02874 ATP synthase alpha/beta family, beta-barrel domain BED35_RS22320 PF00231 ATP synthase BED35_RS22325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED35_RS22325 PF02874 ATP synthase alpha/beta family, beta-barrel domain BED35_RS22330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BED35_RS22330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BED35_RS22335 PF00132 Bacterial transferase hexapeptide (six repeats) BED35_RS22335 PF12804 MobA-like NTP transferase domain BED35_RS22340 PF01380 SIS domain BED35_RS22340 PF13522 Glutamine amidotransferase domain BED35_RS22345 PF12849 PBP superfamily domain BED35_RS22350 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS22355 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS22360 PF00005 ABC transporter BED35_RS22365 PF01895 PhoU domain BED35_RS22370 PF04519 BED35_RS22370 BED35_RS22375 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED35_RS22385 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS22390 PF13419 Haloacid dehalogenase-like hydrolase BED35_RS22395 PF00860 Permease family BED35_RS22400 PF03928 Domain of unknown function (DUF336) BED35_RS22405 PF00072 Response regulator receiver domain BED35_RS22405 PF00196 Bacterial regulatory proteins, luxR family BED35_RS22410 PF00512 His Kinase A (phospho-acceptor) domain BED35_RS22410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED35_RS22415 PF03358 NADPH-dependent FMN reductase BED35_RS22420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED35_RS22420 PF00672 HAMP domain BED35_RS22420 PF02743 Cache domain BED35_RS22425 PF00528 Binding-protein-dependent transport system inner membrane component BED35_RS22430 PF00005 ABC transporter BED35_RS22430 PF09383 NIL domain BED35_RS22435 PF03180 NLPA lipoprotein BED35_RS22440 PF07055 Enoyl reductase FAD binding domain BED35_RS22440 PF12241 Trans-2-enoyl-CoA reductase catalytic region BED35_RS22440 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BED35_RS22445 PF01926 50S ribosome-binding GTPase BED35_RS22445 PF10396 GTP-binding protein TrmE N-terminus BED35_RS22445 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE BED35_RS22450 PF02096 60Kd inner membrane protein BED35_RS22450 PF14849 YidC periplasmic domain BED35_RS22455 PF01809 BED35_RS22455 BED35_RS22460 PF00825 Ribonuclease P BED35_RS22465 PF00468 Ribosomal protein L34