BED35_RS00935 SM00382 ATPases associated with a variety of cellular activities BED35_RS00935 SM00760 Bacterial dnaA protein helix-turn-helix domain BED35_RS00940 SM00480 DNA polymerase III beta subunit BED35_RS00950 SM00387 Histidine kinase-like ATPases BED35_RS00950 SM00433 TopoisomeraseII BED35_RS01030 SM00382 ATPases associated with a variety of cellular activities BED35_RS01030 SM01086 C-terminal, D2-small domain, of ClpB protein BED35_RS01045 SM00354 helix_turn _helix lactose operon repressor BED35_RS01050 SM00487 DEAD-like helicases superfamily BED35_RS01050 SM00490 helicase superfamily c-terminal domain BED35_RS01090 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED35_RS01130 SM00382 ATPases associated with a variety of cellular activities BED35_RS01235 SM00382 ATPases associated with a variety of cellular activities BED35_RS01260 SM00382 ATPases associated with a variety of cellular activities BED35_RS01365 SM00354 helix_turn _helix lactose operon repressor BED35_RS01400 SM00912 haemagglutination activity domain BED35_RS01415 SM00912 haemagglutination activity domain BED35_RS01430 SM00387 Histidine kinase-like ATPases BED35_RS01435 SM00421 helix_turn_helix, Lux Regulon BED35_RS01435 SM00448 cheY-homologous receiver domain BED35_RS01470 SM00382 ATPases associated with a variety of cellular activities BED35_RS01475 SM00382 ATPases associated with a variety of cellular activities BED35_RS01520 SM00028 Tetratricopeptide repeats BED35_RS01530 SM00052 Putative diguanylate phosphodiesterase BED35_RS01570 SM00052 Putative diguanylate phosphodiesterase BED35_RS01590 SM00869 Autotransporter beta-domain BED35_RS01620 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BED35_RS01660 SM00382 ATPases associated with a variety of cellular activities BED35_RS01690 SM00382 ATPases associated with a variety of cellular activities BED35_RS01700 SM00954 Region found in RelA / SpoT proteins BED35_RS01835 SM00354 helix_turn _helix lactose operon repressor BED35_RS01855 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED35_RS01880 SM00642 Alpha-amylase domain BED35_RS01885 SM00642 Alpha-amylase domain BED35_RS01920 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS01920 SM01134 BED35_RS01920 BED35_RS01930 SM00450 Rhodanese Homology Domain BED35_RS01940 SM00421 helix_turn_helix, Lux Regulon BED35_RS01990 SM00899 BED35_RS01990 BED35_RS01995 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS01995 SM00732 Likely ribonuclease with RNase H fold. BED35_RS02025 SM00448 cheY-homologous receiver domain BED35_RS02025 SM00862 Transcriptional regulatory protein, C terminal BED35_RS02030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS02030 SM00387 Histidine kinase-like ATPases BED35_RS02030 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS02045 SM00363 S4 RNA-binding domain BED35_RS02160 SM00354 helix_turn _helix lactose operon repressor BED35_RS02175 SM00382 ATPases associated with a variety of cellular activities BED35_RS02195 SM00100 Cyclic nucleotide-monophosphate binding domain BED35_RS02195 SM00419 helix_turn_helix, cAMP Regulatory protein BED35_RS02230 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS02260 SM00382 ATPases associated with a variety of cellular activities BED35_RS02325 SM00838 Elongation factor G C-terminus BED35_RS02325 SM00889 Elongation factor G, domain IV BED35_RS02345 SM01403 BED35_RS02345 BED35_RS02365 SM01382 BED35_RS02365 BED35_RS02365 SM01383 BED35_RS02365 BED35_RS02380 SM00322 K homology RNA-binding domain BED35_RS02400 SM01374 BED35_RS02400 BED35_RS02405 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED35_RS02470 SM00363 S4 RNA-binding domain BED35_RS02470 SM01390 BED35_RS02470 BED35_RS02475 SM00662 RNA polymerases D BED35_RS02490 SM00422 helix_turn_helix, mercury resistance BED35_RS02610 SM00346 helix_turn_helix isocitrate lyase regulation BED35_RS02615 SM01018 B12 binding domain BED35_RS02620 SM00912 haemagglutination activity domain BED35_RS02670 SM00382 ATPases associated with a variety of cellular activities BED35_RS02700 SM00563 Phosphate acyltransferases BED35_RS02745 SM00829 Enoylreductase BED35_RS02750 SM00382 ATPases associated with a variety of cellular activities BED35_RS02785 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS02820 SM00382 ATPases associated with a variety of cellular activities BED35_RS02835 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS02860 SM00357 Cold shock protein domain BED35_RS02865 SM00357 Cold shock protein domain BED35_RS02905 SM00878 Biotin carboxylase C-terminal domain BED35_RS02930 SM00829 Enoylreductase BED35_RS02935 SM00052 Putative diguanylate phosphodiesterase BED35_RS02935 SM00267 diguanylate cyclase BED35_RS02960 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS03315 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS03330 SM00354 helix_turn _helix lactose operon repressor BED35_RS03340 SM00642 Alpha-amylase domain BED35_RS03350 SM00460 Transglutaminase/protease-like homologues BED35_RS03405 SM00382 ATPases associated with a variety of cellular activities BED35_RS03435 SM00382 ATPases associated with a variety of cellular activities BED35_RS03470 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED35_RS03475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED35_RS03530 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS03535 SM00073 Histidine Phosphotransfer domain BED35_RS03535 SM00091 PAS domain BED35_RS03535 SM00387 Histidine kinase-like ATPases BED35_RS03535 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS03535 SM00448 cheY-homologous receiver domain BED35_RS03550 SM00749 bacterial OsmY and nodulation domain BED35_RS03590 SM00857 Resolvase, N terminal domain BED35_RS03610 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS03650 SM00829 Enoylreductase BED35_RS03710 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS03710 SM00895 BED35_RS03710 BED35_RS03730 SM00858 BED35_RS03730 BED35_RS03765 SM00869 Autotransporter beta-domain BED35_RS03775 SM00869 Autotransporter beta-domain BED35_RS03880 SM00400 zinc finger BED35_RS03880 SM00493 BED35_RS03880 BED35_RS03880 SM00766 DNA primase DnaG DnaB-binding BED35_RS03895 SM01207 BED35_RS03895 BED35_RS03900 SM00905 Dihydroneopterin aldolase BED35_RS03910 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED35_RS03915 SM00287 Bacterial SH3 domain homologues BED35_RS03920 SM01118 BED35_RS03920 BED35_RS03995 SM00387 Histidine kinase-like ATPases BED35_RS03995 SM00433 TopoisomeraseII BED35_RS04015 SM00434 DNA Topoisomerase IV BED35_RS04020 SM00563 Phosphate acyltransferases BED35_RS04030 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS04045 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS04170 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS04195 SM00382 ATPases associated with a variety of cellular activities BED35_RS04230 SM00382 ATPases associated with a variety of cellular activities BED35_RS04260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS04305 SM00382 ATPases associated with a variety of cellular activities BED35_RS04330 SM00382 ATPases associated with a variety of cellular activities BED35_RS04350 SM00858 BED35_RS04350 BED35_RS04555 SM00052 Putative diguanylate phosphodiesterase BED35_RS04555 SM00091 PAS domain BED35_RS04555 SM00267 diguanylate cyclase BED35_RS04600 SM00354 helix_turn _helix lactose operon repressor BED35_RS04620 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS04655 SM00382 ATPases associated with a variety of cellular activities BED35_RS04775 SM00478 endonuclease III BED35_RS04775 SM00525 BED35_RS04775 BED35_RS04800 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS04810 SM01152 BED35_RS04810 BED35_RS04845 SM00732 Likely ribonuclease with RNase H fold. BED35_RS04870 SM00731 SprT homologues. BED35_RS04875 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED35_RS04915 SM00861 Transketolase, pyrimidine binding domain BED35_RS04920 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED35_RS04935 SM00194 Protein tyrosine phosphatase, catalytic domain BED35_RS04935 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED35_RS05115 SM00257 Lysin motif BED35_RS05125 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BED35_RS05125 SM00534 ATPase domain of DNA mismatch repair MUTS family BED35_RS05195 SM00382 ATPases associated with a variety of cellular activities BED35_RS05205 SM00382 ATPases associated with a variety of cellular activities BED35_RS05215 SM00825 Beta-ketoacyl synthase BED35_RS05230 SM00822 BED35_RS05230 BED35_RS05240 SM01235 BED35_RS05240 BED35_RS05250 SM00838 Elongation factor G C-terminus BED35_RS05250 SM00889 Elongation factor G, domain IV BED35_RS05255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED35_RS05295 SM01012 BED35_RS05295 BED35_RS05310 SM00382 ATPases associated with a variety of cellular activities BED35_RS05340 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS05375 SM00382 ATPases associated with a variety of cellular activities BED35_RS05385 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED35_RS05430 SM01091 Transporter associated domain BED35_RS05450 SM00382 ATPases associated with a variety of cellular activities BED35_RS05450 SM00962 SRP54-type protein, GTPase domain BED35_RS05450 SM00963 SRP54-type protein, helical bundle domain BED35_RS05485 SM00448 cheY-homologous receiver domain BED35_RS05485 SM00850 LytTr DNA-binding domain BED35_RS05495 SM00830 Chorismate mutase type II BED35_RS05500 SM00830 Chorismate mutase type II BED35_RS05510 SM00382 ATPases associated with a variety of cellular activities BED35_RS05510 SM01086 C-terminal, D2-small domain, of ClpB protein BED35_RS05520 SM00363 S4 RNA-binding domain BED35_RS05580 SM00155 Phospholipase D. Active site motifs. BED35_RS05585 SM00881 CoA binding domain BED35_RS05590 SM01144 BED35_RS05590 BED35_RS05600 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED35_RS05620 SM00347 helix_turn_helix multiple antibiotic resistance protein BED35_RS05665 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS05680 SM00382 ATPases associated with a variety of cellular activities BED35_RS05815 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS05840 SM00382 ATPases associated with a variety of cellular activities BED35_RS06075 SM01007 Class II Aldolase and Adducin N-terminal domain BED35_RS06105 SM00710 Parallel beta-helix repeats BED35_RS06145 SM00900 BED35_RS06145 BED35_RS06230 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED35_RS06240 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS06240 SM00866 BED35_RS06240 BED35_RS06260 SM01068 Putative carbohydrate binding domain BED35_RS06330 SM00448 cheY-homologous receiver domain BED35_RS06330 SM00862 Transcriptional regulatory protein, C terminal BED35_RS06335 SM00091 PAS domain BED35_RS06335 SM00387 Histidine kinase-like ATPases BED35_RS06335 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS06355 SM00642 Alpha-amylase domain BED35_RS06400 SM01323 BED35_RS06400 BED35_RS06460 SM00861 Transketolase, pyrimidine binding domain BED35_RS06475 SM00981 BED35_RS06475 BED35_RS06560 SM00382 ATPases associated with a variety of cellular activities BED35_RS06560 SM00994 ClpX C4-type zinc finger BED35_RS06560 SM01086 C-terminal, D2-small domain, of ClpB protein BED35_RS06565 SM00382 ATPases associated with a variety of cellular activities BED35_RS06565 SM00464 Found in ATP-dependent protease La (LON) BED35_RS06570 SM00411 bacterial (prokaryotic) histone like domain BED35_RS06580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED35_RS06610 SM00344 helix_turn_helix ASNC type BED35_RS06615 SM00382 ATPases associated with a variety of cellular activities BED35_RS06620 SM00382 ATPases associated with a variety of cellular activities BED35_RS06625 SM00938 Nitrogen regulatory protein P-II BED35_RS06670 SM00382 ATPases associated with a variety of cellular activities BED35_RS06765 SM00382 ATPases associated with a variety of cellular activities BED35_RS06775 SM00493 BED35_RS06775 BED35_RS06780 SM00387 Histidine kinase-like ATPases BED35_RS06880 SM00422 helix_turn_helix, mercury resistance BED35_RS06890 SM00244 prohibitin homologues BED35_RS06900 SM00822 BED35_RS06900 BED35_RS06910 SM00382 ATPases associated with a variety of cellular activities BED35_RS06925 SM01001 AIR carboxylase BED35_RS06940 SM00840 BED35_RS06940 BED35_RS07075 SM00382 ATPases associated with a variety of cellular activities BED35_RS07400 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS07425 SM00382 ATPases associated with a variety of cellular activities BED35_RS07465 SM00507 HNH nucleases BED35_RS07525 SM01252 BED35_RS07525 BED35_RS07615 SM01040 BRO family, N-terminal domain BED35_RS07620 SM01252 BED35_RS07620 BED35_RS07770 SM00448 cheY-homologous receiver domain BED35_RS07770 SM00862 Transcriptional regulatory protein, C terminal BED35_RS07790 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BED35_RS07805 SM00382 ATPases associated with a variety of cellular activities BED35_RS07840 SM00357 Cold shock protein domain BED35_RS07850 SM00267 diguanylate cyclase BED35_RS07860 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS07875 SM00936 Penicillin-binding protein 5, C-terminal domain BED35_RS07930 SM00382 ATPases associated with a variety of cellular activities BED35_RS07945 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS07960 SM00116 Domain in cystathionine beta-synthase and other proteins. BED35_RS07960 SM01091 Transporter associated domain BED35_RS07975 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS08060 SM01081 Putative carbohydrate binding domain BED35_RS08075 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS08110 SM00448 cheY-homologous receiver domain BED35_RS08110 SM00862 Transcriptional regulatory protein, C terminal BED35_RS08115 SM00387 Histidine kinase-like ATPases BED35_RS08115 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS08180 SM00796 Allophanate hydrolase subunit 1 BED35_RS08185 SM00797 Allophanate hydrolase subunit 2 BED35_RS08235 SM00861 Transketolase, pyrimidine binding domain BED35_RS08250 SM00881 CoA binding domain BED35_RS08355 SM00855 Phosphoglycerate mutase family BED35_RS08360 SM00477 DNA/RNA non-specific endonuclease BED35_RS08360 SM00892 DNA/RNA non-specific endonuclease BED35_RS08405 SM00382 ATPases associated with a variety of cellular activities BED35_RS08430 SM00382 ATPases associated with a variety of cellular activities BED35_RS08450 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS08450 SM00876 Biotin and Thiamin Synthesis associated domain BED35_RS08470 SM00382 ATPases associated with a variety of cellular activities BED35_RS08475 SM00487 DEAD-like helicases superfamily BED35_RS08475 SM00490 helicase superfamily c-terminal domain BED35_RS08490 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS08525 SM00382 ATPases associated with a variety of cellular activities BED35_RS08540 SM00487 DEAD-like helicases superfamily BED35_RS08540 SM00490 helicase superfamily c-terminal domain BED35_RS08555 SM00116 Domain in cystathionine beta-synthase and other proteins. BED35_RS08570 SM01118 BED35_RS08570 BED35_RS08575 SM00507 HNH nucleases BED35_RS08590 SM00382 ATPases associated with a variety of cellular activities BED35_RS08635 SM00382 ATPases associated with a variety of cellular activities BED35_RS08640 SM00450 Rhodanese Homology Domain BED35_RS08665 SM00382 ATPases associated with a variety of cellular activities BED35_RS08710 SM00487 DEAD-like helicases superfamily BED35_RS08710 SM00488 BED35_RS08710 BED35_RS08710 SM00491 BED35_RS08710 BED35_RS08735 SM00903 Flavin reductase like domain BED35_RS08745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED35_RS08745 SM00091 PAS domain BED35_RS08745 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS08750 SM00382 ATPases associated with a variety of cellular activities BED35_RS08760 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS08760 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED35_RS08790 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BED35_RS08830 SM00382 ATPases associated with a variety of cellular activities BED35_RS08845 SM00852 Probable molybdopterin binding domain BED35_RS08860 SM00382 ATPases associated with a variety of cellular activities BED35_RS08885 SM00829 Enoylreductase BED35_RS08910 SM00354 helix_turn _helix lactose operon repressor BED35_RS08920 SM00382 ATPases associated with a variety of cellular activities BED35_RS08930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED35_RS08930 SM00382 ATPases associated with a variety of cellular activities BED35_RS09015 SM00919 Malic enzyme, NAD binding domain BED35_RS09015 SM01274 BED35_RS09015 BED35_RS09090 SM01091 Transporter associated domain BED35_RS09120 SM00382 ATPases associated with a variety of cellular activities BED35_RS09185 SM01350 BED35_RS09185 BED35_RS09240 SM00382 ATPases associated with a variety of cellular activities BED35_RS09290 SM00382 ATPases associated with a variety of cellular activities BED35_RS09325 SM00877 BED35_RS09325 BED35_RS09330 SM00877 BED35_RS09330 BED35_RS09370 SM00877 BED35_RS09370 BED35_RS09375 SM00877 BED35_RS09375 BED35_RS09405 SM00877 BED35_RS09405 BED35_RS09410 SM00877 BED35_RS09410 BED35_RS09420 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS09500 SM00382 ATPases associated with a variety of cellular activities BED35_RS09520 SM00855 Phosphoglycerate mutase family BED35_RS09540 SM00421 helix_turn_helix, Lux Regulon BED35_RS09620 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS09620 SM01134 BED35_RS09620 BED35_RS09630 SM00260 Two component signalling adaptor domain BED35_RS09630 SM00448 cheY-homologous receiver domain BED35_RS09640 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS09660 SM00382 ATPases associated with a variety of cellular activities BED35_RS09680 SM00387 Histidine kinase-like ATPases BED35_RS09685 SM00421 helix_turn_helix, Lux Regulon BED35_RS09685 SM00448 cheY-homologous receiver domain BED35_RS09690 SM00448 cheY-homologous receiver domain BED35_RS09695 SM00387 Histidine kinase-like ATPases BED35_RS09705 SM00091 PAS domain BED35_RS09710 SM00764 Citrate lyase ligase C-terminal domain BED35_RS09835 SM00421 helix_turn_helix, Lux Regulon BED35_RS09835 SM00448 cheY-homologous receiver domain BED35_RS09910 SM00344 helix_turn_helix ASNC type BED35_RS09920 SM00829 Enoylreductase BED35_RS09930 SM01038 Beta galactosidase small chain BED35_RS09935 SM00354 helix_turn _helix lactose operon repressor BED35_RS09940 SM00357 Cold shock protein domain BED35_RS09950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS09950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS09970 SM00831 Cation transporter/ATPase, N-terminus BED35_RS09975 SM00829 Enoylreductase BED35_RS10005 SM00073 Histidine Phosphotransfer domain BED35_RS10005 SM00260 Two component signalling adaptor domain BED35_RS10005 SM00387 Histidine kinase-like ATPases BED35_RS10005 SM01231 BED35_RS10005 BED35_RS10010 SM00260 Two component signalling adaptor domain BED35_RS10015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS10015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS10015 SM00319 Homologues of the ligand binding domain of Tar BED35_RS10020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS10020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS10020 SM00319 Homologues of the ligand binding domain of Tar BED35_RS10025 SM00138 Methyltransferase, chemotaxis proteins BED35_RS10030 SM00448 cheY-homologous receiver domain BED35_RS10035 SM00448 cheY-homologous receiver domain BED35_RS10080 SM00858 BED35_RS10080 BED35_RS10125 SM00047 Lysozyme subfamily 2 BED35_RS10185 SM00382 ATPases associated with a variety of cellular activities BED35_RS10230 SM00478 endonuclease III BED35_RS10235 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED35_RS10240 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS10290 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS10290 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED35_RS10300 SM00382 ATPases associated with a variety of cellular activities BED35_RS10360 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS10380 SM00903 Flavin reductase like domain BED35_RS10455 SM00642 Alpha-amylase domain BED35_RS10570 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS10650 SM01400 BED35_RS10650 BED35_RS10670 SM00937 BED35_RS10670 BED35_RS10700 SM00267 diguanylate cyclase BED35_RS10725 SM00481 DNA polymerase alpha chain like domain BED35_RS10800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS10800 SM00387 Histidine kinase-like ATPases BED35_RS10815 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS10875 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS10875 SM00866 BED35_RS10875 BED35_RS10900 SM00869 Autotransporter beta-domain BED35_RS10910 SM00257 Lysin motif BED35_RS10950 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS10950 SM01134 BED35_RS10950 BED35_RS10970 SM00363 S4 RNA-binding domain BED35_RS11040 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED35_RS11045 SM00382 ATPases associated with a variety of cellular activities BED35_RS11060 SM00382 ATPases associated with a variety of cellular activities BED35_RS11070 SM00257 Lysin motif BED35_RS11125 SM00487 DEAD-like helicases superfamily BED35_RS11125 SM00491 BED35_RS11125 BED35_RS11145 SM00341 Helicase and RNase D C-terminal BED35_RS11145 SM00474 3'-5' exonuclease BED35_RS11230 SM01022 BED35_RS11230 BED35_RS11240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED35_RS11240 SM00091 PAS domain BED35_RS11240 SM00267 diguanylate cyclase BED35_RS11250 SM00972 Spore Coat Protein U domain BED35_RS11255 SM00972 Spore Coat Protein U domain BED35_RS11285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED35_RS11290 SM00945 ProQ/FINO family BED35_RS11295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED35_RS11295 SM00245 tail specific protease BED35_RS11320 SM00346 helix_turn_helix isocitrate lyase regulation BED35_RS11325 SM00644 BED35_RS11325 BED35_RS11355 SM00382 ATPases associated with a variety of cellular activities BED35_RS11445 SM00382 ATPases associated with a variety of cellular activities BED35_RS11495 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED35_RS11520 SM00873 B3/4 domain BED35_RS11520 SM00874 tRNA synthetase B5 domain BED35_RS11520 SM00896 Ferredoxin-fold anticodon binding domain BED35_RS11525 SM00411 bacterial (prokaryotic) histone like domain BED35_RS11550 SM00382 ATPases associated with a variety of cellular activities BED35_RS11670 SM00382 ATPases associated with a variety of cellular activities BED35_RS11740 SM00354 helix_turn _helix lactose operon repressor BED35_RS11760 SM00479 BED35_RS11760 BED35_RS11815 SM00347 helix_turn_helix multiple antibiotic resistance protein BED35_RS11840 SM00363 S4 RNA-binding domain BED35_RS11895 SM00382 ATPases associated with a variety of cellular activities BED35_RS11900 SM00382 ATPases associated with a variety of cellular activities BED35_RS11930 SM00382 ATPases associated with a variety of cellular activities BED35_RS11965 SM00953 BED35_RS11965 BED35_RS11975 SM00091 PAS domain BED35_RS11975 SM00382 ATPases associated with a variety of cellular activities BED35_RS11985 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED35_RS12010 SM00148 Phospholipase C, catalytic domain (part); domain X BED35_RS12060 SM00382 ATPases associated with a variety of cellular activities BED35_RS12060 SM00487 DEAD-like helicases superfamily BED35_RS12060 SM00490 helicase superfamily c-terminal domain BED35_RS12060 SM00847 Helicase associated domain (HA2) Add an annotation BED35_RS12070 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS12075 SM00020 Trypsin-like serine protease BED35_RS12090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS12090 SM00387 Histidine kinase-like ATPases BED35_RS12090 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS12095 SM00448 cheY-homologous receiver domain BED35_RS12095 SM00862 Transcriptional regulatory protein, C terminal BED35_RS12120 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BED35_RS12120 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BED35_RS12135 SM00100 Cyclic nucleotide-monophosphate binding domain BED35_RS12135 SM00419 helix_turn_helix, cAMP Regulatory protein BED35_RS12155 SM00871 Bacterial transcription activator, effector binding domain BED35_RS12160 SM00822 BED35_RS12160 BED35_RS12205 SM00644 BED35_RS12205 BED35_RS12270 SM00421 helix_turn_helix, Lux Regulon BED35_RS12295 SM00354 helix_turn _helix lactose operon repressor BED35_RS12325 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS12335 SM00382 ATPases associated with a variety of cellular activities BED35_RS12410 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS12420 SM00900 BED35_RS12420 BED35_RS12430 SM00478 endonuclease III BED35_RS12430 SM00525 BED35_RS12430 BED35_RS12595 SM00382 ATPases associated with a variety of cellular activities BED35_RS12615 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS12620 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS12695 SM00357 Cold shock protein domain BED35_RS12695 SM00955 BED35_RS12695 BED35_RS12715 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS12715 SM01134 BED35_RS12715 BED35_RS12725 SM01007 Class II Aldolase and Adducin N-terminal domain BED35_RS12740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BED35_RS12755 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS12765 SM00028 Tetratricopeptide repeats BED35_RS12775 SM00014 Acid phosphatase homologues BED35_RS12800 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED35_RS12800 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED35_RS12800 SM00493 BED35_RS12800 BED35_RS12815 SM00822 BED35_RS12815 BED35_RS12830 SM00363 S4 RNA-binding domain BED35_RS12840 SM00481 DNA polymerase alpha chain like domain BED35_RS12875 SM00749 bacterial OsmY and nodulation domain BED35_RS12925 SM00052 Putative diguanylate phosphodiesterase BED35_RS12930 SM00155 Phospholipase D. Active site motifs. BED35_RS12940 SM00382 ATPases associated with a variety of cellular activities BED35_RS12945 SM00382 ATPases associated with a variety of cellular activities BED35_RS12990 SM00528 Domain in histone-like proteins of HNS family BED35_RS12995 SM00984 UDP binding domain BED35_RS13000 SM00448 cheY-homologous receiver domain BED35_RS13055 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED35_RS13055 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED35_RS13055 SM00493 BED35_RS13055 BED35_RS13075 SM00870 BED35_RS13075 BED35_RS13100 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED35_RS13115 SM00763 PrkA AAA domain BED35_RS13145 SM00052 Putative diguanylate phosphodiesterase BED35_RS13145 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED35_RS13145 SM00091 PAS domain BED35_RS13145 SM00267 diguanylate cyclase BED35_RS13155 SM01005 Alanine racemase, C-terminal domain BED35_RS13170 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS13210 SM00836 DALR anticodon binding domain BED35_RS13210 SM01016 Arginyl tRNA synthetase N terminal dom BED35_RS13290 SM00382 ATPases associated with a variety of cellular activities BED35_RS13340 SM01007 Class II Aldolase and Adducin N-terminal domain BED35_RS13350 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS13350 SM01134 BED35_RS13350 BED35_RS13355 SM00387 Histidine kinase-like ATPases BED35_RS13360 SM00448 cheY-homologous receiver domain BED35_RS13495 SM00479 BED35_RS13495 BED35_RS13510 SM01022 BED35_RS13510 BED35_RS13520 SM00487 DEAD-like helicases superfamily BED35_RS13520 SM00490 helicase superfamily c-terminal domain BED35_RS13555 SM01091 Transporter associated domain BED35_RS13590 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED35_RS13590 SM00091 PAS domain BED35_RS13590 SM00267 diguanylate cyclase BED35_RS13615 SM00357 Cold shock protein domain BED35_RS13660 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS13680 SM00382 ATPases associated with a variety of cellular activities BED35_RS13685 SM00090 RIO-like kinase BED35_RS13700 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED35_RS13700 SM00091 PAS domain BED35_RS13700 SM00267 diguanylate cyclase BED35_RS13720 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS13770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED35_RS13770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS13780 SM00354 helix_turn _helix lactose operon repressor BED35_RS13785 SM00640 Glycosyl hydrolases family 32 BED35_RS13835 SM01329 BED35_RS13835 BED35_RS13870 SM00448 cheY-homologous receiver domain BED35_RS13870 SM00862 Transcriptional regulatory protein, C terminal BED35_RS13875 SM00387 Histidine kinase-like ATPases BED35_RS13875 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS13905 SM00382 ATPases associated with a variety of cellular activities BED35_RS13915 SM00487 DEAD-like helicases superfamily BED35_RS13915 SM00490 helicase superfamily c-terminal domain BED35_RS13915 SM00982 BED35_RS13915 BED35_RS13915 SM01058 CarD-like/TRCF domain BED35_RS13980 SM00382 ATPases associated with a variety of cellular activities BED35_RS14020 SM00825 Beta-ketoacyl synthase BED35_RS14030 SM00822 BED35_RS14030 BED35_RS14035 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BED35_RS14065 SM00363 S4 RNA-binding domain BED35_RS14070 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS14100 SM00421 helix_turn_helix, Lux Regulon BED35_RS14110 SM00450 Rhodanese Homology Domain BED35_RS14135 SM00421 helix_turn_helix, Lux Regulon BED35_RS14135 SM00448 cheY-homologous receiver domain BED35_RS14195 SM01091 Transporter associated domain BED35_RS14210 SM00421 helix_turn_helix, Lux Regulon BED35_RS14280 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED35_RS14285 SM00992 Hemimethylated DNA-binding protein YccV like BED35_RS14290 SM00881 CoA binding domain BED35_RS14300 SM00851 MGS-like domain BED35_RS14355 SM00825 Beta-ketoacyl synthase BED35_RS14375 SM00382 ATPases associated with a variety of cellular activities BED35_RS14380 SM00981 BED35_RS14380 BED35_RS14430 SM00849 Metallo-beta-lactamase superfamily BED35_RS14485 SM00357 Cold shock protein domain BED35_RS14490 SM00357 Cold shock protein domain BED35_RS14495 SM01150 BED35_RS14495 BED35_RS14505 SM00382 ATPases associated with a variety of cellular activities BED35_RS14510 SM00849 Metallo-beta-lactamase superfamily BED35_RS14515 SM00411 bacterial (prokaryotic) histone like domain BED35_RS14520 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS14545 SM00870 BED35_RS14545 BED35_RS14595 SM00382 ATPases associated with a variety of cellular activities BED35_RS14605 SM00843 BED35_RS14605 BED35_RS14610 SM00344 helix_turn_helix ASNC type BED35_RS14620 SM00382 ATPases associated with a variety of cellular activities BED35_RS14625 SM00382 ATPases associated with a variety of cellular activities BED35_RS14635 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS14640 SM00382 ATPases associated with a variety of cellular activities BED35_RS14640 SM01086 C-terminal, D2-small domain, of ClpB protein BED35_RS14650 SM00357 Cold shock protein domain BED35_RS14655 SM00382 ATPases associated with a variety of cellular activities BED35_RS14720 SM00382 ATPases associated with a variety of cellular activities BED35_RS14725 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS14725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED35_RS14740 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS14740 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED35_RS14765 SM00382 ATPases associated with a variety of cellular activities BED35_RS14800 SM00014 Acid phosphatase homologues BED35_RS14805 SM01133 BED35_RS14805 BED35_RS14810 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS14810 SM01134 BED35_RS14810 BED35_RS14830 SM00936 Penicillin-binding protein 5, C-terminal domain BED35_RS14835 SM00116 Domain in cystathionine beta-synthase and other proteins. BED35_RS14850 SM00382 ATPases associated with a variety of cellular activities BED35_RS14850 SM00930 BED35_RS14850 BED35_RS14880 SM00382 ATPases associated with a variety of cellular activities BED35_RS14915 SM00518 AP endonuclease family 2 BED35_RS14940 SM00862 Transcriptional regulatory protein, C terminal BED35_RS14985 SM00841 Elongation factor P, C-terminal BED35_RS14985 SM01185 BED35_RS14985 BED35_RS15005 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS15005 SM00895 BED35_RS15005 BED35_RS15015 SM00833 Cobalamin synthesis protein cobW C-terminal domain BED35_RS15020 SM00014 Acid phosphatase homologues BED35_RS15035 SM00052 Putative diguanylate phosphodiesterase BED35_RS15055 SM00382 ATPases associated with a variety of cellular activities BED35_RS15070 SM00363 S4 RNA-binding domain BED35_RS15075 SM00487 DEAD-like helicases superfamily BED35_RS15075 SM00490 helicase superfamily c-terminal domain BED35_RS15145 SM01057 Eukaryotic-type carbonic anhydrase BED35_RS15185 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS15200 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS15200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS15250 SM00387 Histidine kinase-like ATPases BED35_RS15250 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS15255 SM00421 helix_turn_helix, Lux Regulon BED35_RS15255 SM00448 cheY-homologous receiver domain BED35_RS15260 SM00387 Histidine kinase-like ATPases BED35_RS15260 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS15260 SM00448 cheY-homologous receiver domain BED35_RS15265 SM00434 DNA Topoisomerase IV BED35_RS15305 SM00852 Probable molybdopterin binding domain BED35_RS15320 SM01060 BED35_RS15320 BED35_RS15330 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED35_RS15380 SM00354 helix_turn _helix lactose operon repressor BED35_RS15445 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS15445 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BED35_RS15450 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BED35_RS15485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED35_RS15525 SM00354 helix_turn _helix lactose operon repressor BED35_RS15560 SM00052 Putative diguanylate phosphodiesterase BED35_RS15575 SM00382 ATPases associated with a variety of cellular activities BED35_RS15590 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS15635 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED35_RS15645 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS15660 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS15700 SM00354 helix_turn _helix lactose operon repressor BED35_RS15740 SM00825 Beta-ketoacyl synthase BED35_RS15780 SM00463 Small MutS-related domain BED35_RS15855 SM00382 ATPases associated with a variety of cellular activities BED35_RS15890 SM00778 Zinc-binding domain of primase-helicase BED35_RS15960 SM00354 helix_turn _helix lactose operon repressor BED35_RS15965 SM00867 YceI-like domain BED35_RS15995 SM00382 ATPases associated with a variety of cellular activities BED35_RS16040 SM00382 ATPases associated with a variety of cellular activities BED35_RS16085 SM00448 cheY-homologous receiver domain BED35_RS16085 SM00850 LytTr DNA-binding domain BED35_RS16190 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED35_RS16190 SM00292 breast cancer carboxy-terminal domain BED35_RS16190 SM00532 Ligase N family BED35_RS16195 SM00771 ZipA, C-terminal domain (FtsZ-binding) BED35_RS16225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS16225 SM00387 Histidine kinase-like ATPases BED35_RS16225 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS16230 SM00448 cheY-homologous receiver domain BED35_RS16230 SM00862 Transcriptional regulatory protein, C terminal BED35_RS16240 SM00382 ATPases associated with a variety of cellular activities BED35_RS16250 SM00382 ATPases associated with a variety of cellular activities BED35_RS16295 SM01130 BED35_RS16295 BED35_RS16340 SM00919 Malic enzyme, NAD binding domain BED35_RS16340 SM01274 BED35_RS16340 BED35_RS16360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS16375 SM00421 helix_turn_helix, Lux Regulon BED35_RS16375 SM00448 cheY-homologous receiver domain BED35_RS16495 SM01130 BED35_RS16495 BED35_RS16560 SM00382 ATPases associated with a variety of cellular activities BED35_RS16595 SM00052 Putative diguanylate phosphodiesterase BED35_RS16595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED35_RS16595 SM00091 PAS domain BED35_RS16595 SM00267 diguanylate cyclase BED35_RS16625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS16625 SM00387 Histidine kinase-like ATPases BED35_RS16625 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS16630 SM00448 cheY-homologous receiver domain BED35_RS16630 SM00862 Transcriptional regulatory protein, C terminal BED35_RS16645 SM00046 Diacylglycerol kinase catalytic domain (presumed) BED35_RS16675 SM00420 helix_turn_helix, Deoxyribose operon repressor BED35_RS16675 SM01134 BED35_RS16675 BED35_RS16680 SM00116 Domain in cystathionine beta-synthase and other proteins. BED35_RS16795 SM00116 Domain in cystathionine beta-synthase and other proteins. BED35_RS16795 SM01240 BED35_RS16795 BED35_RS16820 SM00382 ATPases associated with a variety of cellular activities BED35_RS16830 SM00564 beta-propeller repeat BED35_RS16850 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS16855 SM00028 Tetratricopeptide repeats BED35_RS16865 SM00562 BED35_RS16865 BED35_RS16880 SM01359 BED35_RS16880 BED35_RS16880 SM01360 BED35_RS16880 BED35_RS16885 SM00869 Autotransporter beta-domain BED35_RS16915 SM00271 DnaJ molecular chaperone homology domain BED35_RS17010 SM00938 Nitrogen regulatory protein P-II BED35_RS17020 SM00382 ATPases associated with a variety of cellular activities BED35_RS17020 SM00448 cheY-homologous receiver domain BED35_RS17030 SM00387 Histidine kinase-like ATPases BED35_RS17030 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS17040 SM01211 BED35_RS17040 BED35_RS17045 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS17105 SM00358 Double-stranded RNA binding motif BED35_RS17105 SM00535 Ribonuclease III family BED35_RS17155 SM00487 DEAD-like helicases superfamily BED35_RS17155 SM00490 helicase superfamily c-terminal domain BED35_RS17170 SM00248 ankyrin repeats BED35_RS17190 SM00986 Uracil DNA glycosylase superfamily BED35_RS17190 SM00987 UreE urease accessory protein, C-terminal domain BED35_RS17250 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS17335 SM00988 UreE urease accessory protein, N-terminal domain BED35_RS17355 SM00382 ATPases associated with a variety of cellular activities BED35_RS17360 SM00382 ATPases associated with a variety of cellular activities BED35_RS17390 SM00450 Rhodanese Homology Domain BED35_RS17405 SM00357 Cold shock protein domain BED35_RS17430 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS17450 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS17480 SM00382 ATPases associated with a variety of cellular activities BED35_RS17500 SM00479 BED35_RS17500 BED35_RS17515 SM00849 Metallo-beta-lactamase superfamily BED35_RS17520 SM00257 Lysin motif BED35_RS17550 SM00825 Beta-ketoacyl synthase BED35_RS17595 SM00382 ATPases associated with a variety of cellular activities BED35_RS17595 SM00930 BED35_RS17595 BED35_RS17635 SM01322 BED35_RS17635 BED35_RS17655 SM00977 TilS substrate C-terminal domain BED35_RS17675 SM00481 DNA polymerase alpha chain like domain BED35_RS17705 SM00935 Outer membrane protein (OmpH-like) BED35_RS17715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED35_RS17760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED35_RS17805 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED35_RS17805 SM00475 5'-3' exonuclease BED35_RS17850 SM00925 MltA specific insert domain BED35_RS17870 SM00646 BED35_RS17870 BED35_RS17930 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED35_RS17945 SM00927 DNA mismatch repair enzyme MutH BED35_RS17965 SM00563 Phosphate acyltransferases BED35_RS17975 SM00354 helix_turn _helix lactose operon repressor BED35_RS18000 SM00849 Metallo-beta-lactamase superfamily BED35_RS18020 SM00862 Transcriptional regulatory protein, C terminal BED35_RS18070 SM00382 ATPases associated with a variety of cellular activities BED35_RS18090 SM00947 Carbonic anhydrase BED35_RS18100 SM00822 BED35_RS18100 BED35_RS18110 SM00271 DnaJ molecular chaperone homology domain BED35_RS18120 SM00091 PAS domain BED35_RS18120 SM00267 diguanylate cyclase BED35_RS18145 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS18155 SM00530 Helix-turn-helix XRE-family like proteins BED35_RS18260 SM00937 BED35_RS18260 BED35_RS18290 SM00387 Histidine kinase-like ATPases BED35_RS18290 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS18295 SM00448 cheY-homologous receiver domain BED35_RS18295 SM00862 Transcriptional regulatory protein, C terminal BED35_RS18330 SM00822 BED35_RS18330 BED35_RS18365 SM01011 Aminopeptidase P, N-terminal domain BED35_RS18390 SM01192 BED35_RS18390 BED35_RS18390 SM01193 BED35_RS18390 BED35_RS18405 SM00954 Region found in RelA / SpoT proteins BED35_RS18415 SM00073 Histidine Phosphotransfer domain BED35_RS18415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS18415 SM00387 Histidine kinase-like ATPases BED35_RS18415 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS18415 SM00448 cheY-homologous receiver domain BED35_RS18420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED35_RS18425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED35_RS18475 SM00382 ATPases associated with a variety of cellular activities BED35_RS18485 SM00487 DEAD-like helicases superfamily BED35_RS18485 SM00490 helicase superfamily c-terminal domain BED35_RS18485 SM00847 Helicase associated domain (HA2) Add an annotation BED35_RS18545 SM00382 ATPases associated with a variety of cellular activities BED35_RS18550 SM00947 Carbonic anhydrase BED35_RS18630 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS18630 SM00895 BED35_RS18630 BED35_RS18645 SM00644 BED35_RS18645 BED35_RS18670 SM01240 BED35_RS18670 BED35_RS18695 SM00957 SecA DEAD-like domain BED35_RS18695 SM00958 SecA preprotein cross-linking domain BED35_RS18715 SM00864 Tubulin/FtsZ family, GTPase domain BED35_RS18715 SM00865 Tubulin/FtsZ family, C-terminal domain BED35_RS18720 SM00842 Cell division protein FtsA BED35_RS18795 SM00354 helix_turn _helix lactose operon repressor BED35_RS18820 SM00917 LeuA allosteric (dimerisation) domain BED35_RS18825 SM01329 BED35_RS18825 BED35_RS18890 SM00382 ATPases associated with a variety of cellular activities BED35_RS18900 SM00486 DNA polymerase type-B family BED35_RS18905 SM00487 DEAD-like helicases superfamily BED35_RS18905 SM00490 helicase superfamily c-terminal domain BED35_RS18910 SM00634 Bacterial Ig-like domain (group 1) BED35_RS18920 SM00271 DnaJ molecular chaperone homology domain BED35_RS18940 SM00650 Ribosomal RNA adenine dimethylases BED35_RS18975 SM00851 MGS-like domain BED35_RS18975 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BED35_RS18980 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BED35_RS19010 SM00904 Riboflavin kinase BED35_RS19035 SM00271 DnaJ molecular chaperone homology domain BED35_RS19050 SM00247 Beta/gamma crystallins BED35_RS19060 SM00852 Probable molybdopterin binding domain BED35_RS19100 SM00448 cheY-homologous receiver domain BED35_RS19100 SM00862 Transcriptional regulatory protein, C terminal BED35_RS19110 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS19110 SM00871 Bacterial transcription activator, effector binding domain BED35_RS19115 SM00855 Phosphoglycerate mutase family BED35_RS19135 SM00831 Cation transporter/ATPase, N-terminus BED35_RS19145 SM00267 diguanylate cyclase BED35_RS19155 SM00382 ATPases associated with a variety of cellular activities BED35_RS19170 SM00829 Enoylreductase BED35_RS19180 SM00382 ATPases associated with a variety of cellular activities BED35_RS19205 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BED35_RS19210 SM01133 BED35_RS19210 BED35_RS19235 SM00749 bacterial OsmY and nodulation domain BED35_RS19280 SM00267 diguanylate cyclase BED35_RS19310 SM00640 Glycosyl hydrolases family 32 BED35_RS19315 SM00354 helix_turn _helix lactose operon repressor BED35_RS19320 SM00091 PAS domain BED35_RS19370 SM01120 BED35_RS19370 BED35_RS19425 SM00382 ATPases associated with a variety of cellular activities BED35_RS19445 SM01133 BED35_RS19445 BED35_RS19555 SM00382 ATPases associated with a variety of cellular activities BED35_RS19560 SM00382 ATPases associated with a variety of cellular activities BED35_RS19590 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS19590 SM00866 BED35_RS19590 BED35_RS19615 SM00382 ATPases associated with a variety of cellular activities BED35_RS19620 SM00382 ATPases associated with a variety of cellular activities BED35_RS19630 SM00072 Guanylate kinase homologues. BED35_RS19665 SM00382 ATPases associated with a variety of cellular activities BED35_RS19755 SM00487 DEAD-like helicases superfamily BED35_RS19755 SM00490 helicase superfamily c-terminal domain BED35_RS19760 SM00028 Tetratricopeptide repeats BED35_RS19765 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS19765 SM00322 K homology RNA-binding domain BED35_RS19770 SM01387 BED35_RS19770 BED35_RS19785 SM00173 Ras subfamily of RAS small GTPases BED35_RS19790 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS19790 SM00322 K homology RNA-binding domain BED35_RS19825 SM00382 ATPases associated with a variety of cellular activities BED35_RS19835 SM01103 BED35_RS19835 BED35_RS19850 SM00448 cheY-homologous receiver domain BED35_RS19850 SM00862 Transcriptional regulatory protein, C terminal BED35_RS19855 SM00387 Histidine kinase-like ATPases BED35_RS19855 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS19920 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS19920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS19950 SM01091 Transporter associated domain BED35_RS20040 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED35_RS20045 SM00316 Ribosomal protein S1-like RNA-binding domain BED35_RS20045 SM00357 Cold shock protein domain BED35_RS20045 SM00955 BED35_RS20045 BED35_RS20055 SM00788 Adenylosuccinate synthetase BED35_RS20065 SM00244 prohibitin homologues BED35_RS20070 SM00244 prohibitin homologues BED35_RS20090 SM00853 MutL C terminal dimerisation domain BED35_RS20090 SM01340 BED35_RS20090 BED35_RS20095 SM00257 Lysin motif BED35_RS20095 SM00646 BED35_RS20095 BED35_RS20125 SM00479 BED35_RS20125 BED35_RS20185 SM00841 Elongation factor P, C-terminal BED35_RS20185 SM01185 BED35_RS20185 BED35_RS20210 SM00883 Chaperonin 10 Kd subunit BED35_RS20275 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS20315 SM00382 ATPases associated with a variety of cellular activities BED35_RS20355 SM00382 ATPases associated with a variety of cellular activities BED35_RS20360 SM00965 Secretin and TonB N terminus short domain BED35_RS20425 SM00382 ATPases associated with a variety of cellular activities BED35_RS20475 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS20545 SM00421 helix_turn_helix, Lux Regulon BED35_RS20545 SM00448 cheY-homologous receiver domain BED35_RS20610 SM00798 AICARFT/IMPCHase bienzyme BED35_RS20610 SM00851 MGS-like domain BED35_RS20615 SM01209 BED35_RS20615 BED35_RS20615 SM01210 BED35_RS20615 BED35_RS20625 SM00411 bacterial (prokaryotic) histone like domain BED35_RS20680 SM00876 Biotin and Thiamin Synthesis associated domain BED35_RS20690 SM00663 RNA polymerase I subunit A N-terminus BED35_RS20715 SM00649 Ribosomal protein L11/L12 BED35_RS20720 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED35_RS20720 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED35_RS20850 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED35_RS20855 SM01004 Delta-aminolevulinic acid dehydratase BED35_RS20950 SM00382 ATPases associated with a variety of cellular activities BED35_RS21000 SM00382 ATPases associated with a variety of cellular activities BED35_RS21005 SM00382 ATPases associated with a variety of cellular activities BED35_RS21050 SM00382 ATPases associated with a variety of cellular activities BED35_RS21055 SM00382 ATPases associated with a variety of cellular activities BED35_RS21055 SM00962 SRP54-type protein, GTPase domain BED35_RS21055 SM00963 SRP54-type protein, helical bundle domain BED35_RS21150 SM00341 Helicase and RNase D C-terminal BED35_RS21150 SM00487 DEAD-like helicases superfamily BED35_RS21150 SM00490 helicase superfamily c-terminal domain BED35_RS21150 SM00956 BED35_RS21150 BED35_RS21220 SM01219 BED35_RS21220 BED35_RS21325 SM00984 UDP binding domain BED35_RS21350 SM00357 Cold shock protein domain BED35_RS21350 SM00382 ATPases associated with a variety of cellular activities BED35_RS21350 SM00959 Rho termination factor, N-terminal domain BED35_RS21360 SM00487 DEAD-like helicases superfamily BED35_RS21360 SM00490 helicase superfamily c-terminal domain BED35_RS21370 SM00060 Fibronectin type 3 domain BED35_RS21415 SM00778 Zinc-binding domain of primase-helicase BED35_RS21415 SM00885 D5 N terminal like BED35_RS21450 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS21460 SM00382 ATPases associated with a variety of cellular activities BED35_RS21490 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS21535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED35_RS21550 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS21550 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS21550 SM01358 BED35_RS21550 BED35_RS21565 SM00966 SpoVT / AbrB like domain BED35_RS21575 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS21655 SM00642 Alpha-amylase domain BED35_RS21735 SM00448 cheY-homologous receiver domain BED35_RS21735 SM00862 Transcriptional regulatory protein, C terminal BED35_RS21740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS21740 SM00387 Histidine kinase-like ATPases BED35_RS21740 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS21745 SM00342 helix_turn_helix, arabinose operon control protein BED35_RS21755 SM00971 Serine acetyltransferase, N-terminal BED35_RS21775 SM00450 Rhodanese Homology Domain BED35_RS21805 SM00829 Enoylreductase BED35_RS21845 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BED35_RS21845 SM01232 BED35_RS21845 BED35_RS21945 SM00778 Zinc-binding domain of primase-helicase BED35_RS21985 SM00849 Metallo-beta-lactamase superfamily BED35_RS21995 SM00052 Putative diguanylate phosphodiesterase BED35_RS21995 SM00091 PAS domain BED35_RS21995 SM00267 diguanylate cyclase BED35_RS22030 SM00072 Guanylate kinase homologues. BED35_RS22035 SM01409 BED35_RS22035 BED35_RS22040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED35_RS22040 SM00954 Region found in RelA / SpoT proteins BED35_RS22050 SM00487 DEAD-like helicases superfamily BED35_RS22050 SM00490 helicase superfamily c-terminal domain BED35_RS22070 SM00421 helix_turn_helix, Lux Regulon BED35_RS22075 SM00421 helix_turn_helix, Lux Regulon BED35_RS22110 SM01230 BED35_RS22110 BED35_RS22120 SM00091 PAS domain BED35_RS22120 SM00387 Histidine kinase-like ATPases BED35_RS22120 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS22125 SM00382 ATPases associated with a variety of cellular activities BED35_RS22125 SM00448 cheY-homologous receiver domain BED35_RS22130 SM00729 Elongator protein 3, MiaB family, Radical SAM BED35_RS22145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED35_RS22145 SM00474 3'-5' exonuclease BED35_RS22145 SM00475 5'-3' exonuclease BED35_RS22145 SM00482 DNA polymerase A domain BED35_RS22205 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED35_RS22205 SM00895 BED35_RS22205 BED35_RS22215 SM00354 helix_turn _helix lactose operon repressor BED35_RS22235 SM00382 ATPases associated with a variety of cellular activities BED35_RS22250 SM00382 ATPases associated with a variety of cellular activities BED35_RS22255 SM00327 von Willebrand factor (vWF) type A domain BED35_RS22270 SM00344 helix_turn_helix ASNC type BED35_RS22280 SM01228 BED35_RS22280 BED35_RS22325 SM00382 ATPases associated with a variety of cellular activities BED35_RS22360 SM00382 ATPases associated with a variety of cellular activities BED35_RS22375 SM00062 Bacterial periplasmic substrate-binding proteins BED35_RS22405 SM00421 helix_turn_helix, Lux Regulon BED35_RS22405 SM00448 cheY-homologous receiver domain BED35_RS22410 SM00387 Histidine kinase-like ATPases BED35_RS22410 SM00388 His Kinase A (phosphoacceptor) domain BED35_RS22420 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED35_RS22420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED35_RS22430 SM00382 ATPases associated with a variety of cellular activities BED35_RS22430 SM00930 BED35_RS22430 BED35_RS22455 SM01234 BED35_RS22455