locus-tag class description BED33_RS00030 PF13358 DDE superfamily endonuclease BED33_RS00030 PF13592 Winged helix-turn helix BED33_RS00035 PF02543 Carbamoyltransferase N-terminus BED33_RS00035 PF16861 Carbamoyltransferase C-terminus BED33_RS00050 PF02734 DAK2 domain BED33_RS00055 PF02733 Dak1 domain BED33_RS00060 PF00465 Iron-containing alcohol dehydrogenase BED33_RS00065 PF00873 AcrB/AcrD/AcrF family BED33_RS00070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS00090 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED33_RS00095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED33_RS00095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED33_RS00100 PF00325 Bacterial regulatory proteins, crp family BED33_RS00100 PF04198 Putative sugar-binding domain BED33_RS00105 PF00005 ABC transporter BED33_RS00110 PF02653 Branched-chain amino acid transport system / permease component BED33_RS00115 PF02653 Branched-chain amino acid transport system / permease component BED33_RS00120 PF13407 Periplasmic binding protein domain BED33_RS00125 PF01791 DeoC/LacD family aldolase BED33_RS00130 PF03992 Antibiotic biosynthesis monooxygenase BED33_RS00140 PF10696 Protein of unknown function (DUF2501) BED33_RS00145 PF00872 Transposase, Mutator family BED33_RS00155 PF01527 Transposase BED33_RS00175 PF03739 Lipopolysaccharide export system permease LptF/LptG BED33_RS00180 PF03739 Lipopolysaccharide export system permease LptF/LptG BED33_RS00185 PF00883 Cytosol aminopeptidase family, catalytic domain BED33_RS00185 PF02789 Cytosol aminopeptidase family, N-terminal domain BED33_RS00190 PF04364 DNA polymerase III chi subunit, HolC BED33_RS00195 PF10458 Valyl tRNA synthetase tRNA binding arm BED33_RS00195 PF08264 Anticodon-binding domain of tRNA BED33_RS00195 PF00133 tRNA synthetases class I (I, L, M and V) BED33_RS00200 PF00583 Acetyltransferase (GNAT) family BED33_RS00205 PF06877 Regulator of ribonuclease activity B BED33_RS00210 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BED33_RS00210 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BED33_RS00215 PF04074 YhcH/YjgK/YiaL BED33_RS00225 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS00230 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS00230 PF12911 N-terminal TM domain of oligopeptide transport permease C BED33_RS00235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS00235 PF00005 ABC transporter BED33_RS00240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS00240 PF00005 ABC transporter BED33_RS00250 PF13597 Anaerobic ribonucleoside-triphosphate reductase BED33_RS00250 PF03477 ATP cone domain BED33_RS00270 PF07702 UTRA domain BED33_RS00270 PF00392 Bacterial regulatory proteins, gntR family BED33_RS00275 PF06754 Phosphonate metabolism protein PhnG BED33_RS00280 PF05845 Bacterial phosphonate metabolism protein (PhnH) BED33_RS00285 PF05861 Bacterial phosphonate metabolism protein (PhnI) BED33_RS00290 PF06007 Phosphonate metabolism protein PhnJ BED33_RS00295 PF00005 ABC transporter BED33_RS00300 PF00005 ABC transporter BED33_RS00305 PF07969 Amidohydrolase family BED33_RS00315 PF12706 Beta-lactamase superfamily domain BED33_RS00320 PF13460 NAD(P)H-binding BED33_RS00325 PF05016 ParE toxin of type II toxin-antitoxin system, parDE BED33_RS00345 PF00005 ABC transporter BED33_RS00345 PF17912 MalK OB fold domain BED33_RS00345 PF03459 TOBE domain BED33_RS00350 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS00355 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS00360 PF13416 Bacterial extracellular solute-binding protein BED33_RS00370 PF07940 Heparinase II/III-like protein BED33_RS00370 PF05426 Alginate lyase BED33_RS00375 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED33_RS00375 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED33_RS00375 PF01276 Orn/Lys/Arg decarboxylase, major domain BED33_RS00380 PF13520 Amino acid permease BED33_RS00390 PF13508 Acetyltransferase (GNAT) domain BED33_RS00395 PF02036 SCP-2 sterol transfer family BED33_RS00400 PF01136 Peptidase family U32 BED33_RS00405 PF01136 Peptidase family U32 BED33_RS00410 PF03313 Serine dehydratase alpha chain BED33_RS00420 PF02321 Outer membrane efflux protein BED33_RS00420 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BED33_RS00425 PF00296 Luciferase-like monooxygenase BED33_RS00435 PF00271 Helicase conserved C-terminal domain BED33_RS00435 PF03880 DbpA RNA binding domain BED33_RS00435 PF12343 Cold shock protein DEAD box A BED33_RS00435 PF00270 DEAD/DEAH box helicase BED33_RS00440 PF13181 Tetratricopeptide repeat BED33_RS00440 PF07719 Tetratricopeptide repeat BED33_RS00445 PF01138 3' exoribonuclease family, domain 1 BED33_RS00445 PF00013 KH domain BED33_RS00445 PF03725 3' exoribonuclease family, domain 2 BED33_RS00445 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BED33_RS00445 PF00575 S1 RNA binding domain BED33_RS00450 PF00312 Ribosomal protein S15 BED33_RS00455 PF01509 TruB family pseudouridylate synthase (N terminal domain) BED33_RS00455 PF16198 tRNA pseudouridylate synthase B C-terminal domain BED33_RS00455 PF09157 Pseudouridine synthase II TruB, C-terminal BED33_RS00460 PF02033 Ribosome-binding factor A BED33_RS00465 PF04760 Translation initiation factor IF-2, N-terminal region BED33_RS00465 PF00009 Elongation factor Tu GTP binding domain BED33_RS00465 PF08364 Bacterial translation initiation factor IF-2 associated region BED33_RS00465 PF03144 Elongation factor Tu domain 2 BED33_RS00465 PF11987 Translation-initiation factor 2 BED33_RS00470 PF00575 S1 RNA binding domain BED33_RS00470 PF13184 NusA-like KH domain BED33_RS00470 PF08529 NusA N-terminal domain BED33_RS00475 PF17384 RimP C-terminal SH3 domain BED33_RS00475 PF02576 RimP N-terminal domain BED33_RS00490 PF03840 Preprotein translocase SecG subunit BED33_RS00495 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BED33_RS00495 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BED33_RS00495 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BED33_RS00495 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BED33_RS00500 PF00809 Pterin binding enzyme BED33_RS00505 PF17862 AAA+ lid domain BED33_RS00505 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS00505 PF06480 FtsH Extracellular BED33_RS00505 PF01434 Peptidase family M41 BED33_RS00510 PF01728 FtsJ-like methyltransferase BED33_RS00515 PF01985 CRS1 / YhbY (CRM) domain BED33_RS00520 PF03449 Transcription elongation factor, N-terminal BED33_RS00520 PF01272 Transcription elongation factor, GreA/GreB, C-term BED33_RS00525 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family BED33_RS00530 PF00486 Transcriptional regulatory protein, C terminal BED33_RS00530 PF00072 Response regulator receiver domain BED33_RS00535 PF00672 HAMP domain BED33_RS00535 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS00540 PF01018 GTP1/OBG BED33_RS00540 PF01926 50S ribosome-binding GTPase BED33_RS00545 PF00892 EamA-like transporter family BED33_RS00550 PF01016 Ribosomal L27 protein BED33_RS00555 PF00829 Ribosomal prokaryotic L21 protein BED33_RS00560 PF00348 Polyprenyl synthetase BED33_RS00570 PF13693 Winged helix-turn-helix DNA-binding BED33_RS00575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BED33_RS00575 PF00056 lactate/malate dehydrogenase, NAD binding domain BED33_RS00580 PF02863 Arginine repressor, C-terminal domain BED33_RS00580 PF01316 Arginine repressor, DNA binding domain BED33_RS00590 PF01225 Mur ligase family, catalytic domain BED33_RS00590 PF08245 Mur ligase middle domain BED33_RS00590 PF02875 Mur ligase family, glutamate ligase domain BED33_RS00595 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain BED33_RS00600 PF00672 HAMP domain BED33_RS00600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS00600 PF02203 Tar ligand binding domain homologue BED33_RS00605 PF00719 Inorganic pyrophosphatase BED33_RS00610 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like BED33_RS00615 PF04357 TamB, inner membrane protein subunit of TAM complex BED33_RS00620 PF17243 POTRA domain TamA domain 1 BED33_RS00620 PF07244 Surface antigen variable number repeat BED33_RS00620 PF01103 Surface antigen BED33_RS00625 PF01625 Peptide methionine sulfoxide reductase BED33_RS00630 PF03471 Transporter associated domain BED33_RS00630 PF01595 Cyclin M transmembrane N-terminal domain BED33_RS00630 PF00571 CBS domain BED33_RS00635 PF06526 Protein of unknown function (DUF1107) BED33_RS00640 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) BED33_RS00645 PF00459 Inositol monophosphatase family BED33_RS00650 PF00149 Calcineurin-like phosphoesterase BED33_RS00650 PF02872 5'-nucleotidase, C-terminal domain BED33_RS00660 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BED33_RS00660 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED33_RS00665 PF08525 Opacity-associated protein A N-terminal motif BED33_RS00665 PF04225 Opacity-associated protein A LysM-like domain BED33_RS00675 PF01281 Ribosomal protein L9, N-terminal domain BED33_RS00675 PF03948 Ribosomal protein L9, C-terminal domain BED33_RS00680 PF01084 Ribosomal protein S18 BED33_RS00685 PF00436 Single-strand binding protein family BED33_RS00690 PF01250 Ribosomal protein S6 BED33_RS00700 PF00326 Prolyl oligopeptidase family BED33_RS00705 PF07338 Protein of unknown function (DUF1471) BED33_RS00710 PF18158 Adaptive response protein AidB N-terminal domain BED33_RS00710 PF02770 Acyl-CoA dehydrogenase, middle domain BED33_RS00710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BED33_RS00715 PF02371 Transposase IS116/IS110/IS902 family BED33_RS00715 PF01548 Transposase BED33_RS00720 PF08032 RNA 2'-O ribose methyltransferase substrate binding BED33_RS00720 PF00588 SpoU rRNA Methylase family BED33_RS00725 PF00575 S1 RNA binding domain BED33_RS00725 PF08206 Ribonuclease B OB domain BED33_RS00725 PF08461 Ribonuclease R winged-helix domain BED33_RS00725 PF17876 Cold shock domain BED33_RS00725 PF00773 RNB domain BED33_RS00730 PF02082 Transcriptional regulator BED33_RS00735 PF00709 Adenylosuccinate synthetase BED33_RS00740 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) BED33_RS00745 PF01145 SPFH domain / Band 7 family BED33_RS00750 PF01145 SPFH domain / Band 7 family BED33_RS00750 PF12221 Bacterial membrane protein N terminal BED33_RS00755 PF13167 GTP-binding GTPase N-terminal BED33_RS00755 PF16360 GTP-binding GTPase Middle Region BED33_RS00755 PF01926 50S ribosome-binding GTPase BED33_RS00760 PF17209 Hfq protein BED33_RS00770 PF08676 MutL C terminal dimerisation domain BED33_RS00770 PF01119 DNA mismatch repair protein, C-terminal domain BED33_RS00775 PF01520 N-acetylmuramoyl-L-alanine amidase BED33_RS00780 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BED33_RS00785 PF03853 YjeF-related protein N-terminus BED33_RS00785 PF01256 Carbohydrate kinase BED33_RS00790 PF08331 Domain of unknown function (DUF1730) BED33_RS00805 PF00929 Exonuclease BED33_RS00810 PF03193 RsgA GTPase BED33_RS00815 PF02666 Phosphatidylserine decarboxylase BED33_RS00820 PF00924 Mechanosensitive ion channel BED33_RS00820 PF12795 Mechanosensitive ion channel porin domain BED33_RS00820 PF12794 Mechanosensitive ion channel inner membrane domain 1 BED33_RS00825 PF00152 tRNA synthetases class II (D, K and N) BED33_RS00830 PF00890 FAD binding domain BED33_RS00830 PF02910 Fumarate reductase flavoprotein C-term BED33_RS00835 PF13085 2Fe-2S iron-sulfur cluster binding domain BED33_RS00835 PF13183 4Fe-4S dicluster domain BED33_RS00840 PF02300 Fumarate reductase subunit C BED33_RS00845 PF02313 Fumarate reductase subunit D BED33_RS00850 PF08212 Lipocalin-like domain BED33_RS00855 PF00893 Small Multidrug Resistance protein BED33_RS00860 PF08085 Entericidin EcnA/B family BED33_RS00865 PF09285 Elongation factor P, C-terminal BED33_RS00865 PF01132 Elongation factor P (EF-P) OB domain BED33_RS00865 PF08207 Elongation factor P (EF-P) KOW-like domain BED33_RS00870 PF04055 Radical SAM superfamily BED33_RS00875 PF13698 Domain of unknown function (DUF4156) BED33_RS00885 PF00118 TCP-1/cpn60 chaperonin family BED33_RS00890 PF00166 Chaperonin 10 Kd subunit BED33_RS00895 PF04186 FxsA cytoplasmic membrane protein BED33_RS00900 PF00206 Lyase BED33_RS00900 PF10415 Fumarase C C-terminus BED33_RS00905 PF03605 Anaerobic c4-dicarboxylate membrane transporter BED33_RS00910 PF03091 CutA1 divalent ion tolerance protein BED33_RS00915 PF11412 Disulphide bond corrector protein DsbC BED33_RS00915 PF02683 Cytochrome C biogenesis protein transmembrane region BED33_RS00920 PF02595 Glycerate kinase family BED33_RS00935 PF01228 Glycine radical BED33_RS00935 PF02901 Pyruvate formate lyase-like BED33_RS00940 PF00871 Acetokinase family BED33_RS00945 PF01490 Transmembrane amino acid transporter protein BED33_RS00950 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS00955 PF04055 Radical SAM superfamily BED33_RS00960 PF06228 Haem utilisation ChuX/HutX BED33_RS00970 PF10636 Hemin uptake protein hemP BED33_RS00975 PF07715 TonB-dependent Receptor Plug Domain BED33_RS00975 PF00593 TonB dependent receptor BED33_RS00980 PF05171 Haemin-degrading HemS.ChuX domain BED33_RS00985 PF01497 Periplasmic binding protein BED33_RS00990 PF01032 FecCD transport family BED33_RS00995 PF00005 ABC transporter BED33_RS01010 PF07715 TonB-dependent Receptor Plug Domain BED33_RS01010 PF00593 TonB dependent receptor BED33_RS01020 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system BED33_RS01025 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system BED33_RS01035 PF00005 ABC transporter BED33_RS01035 PF06472 ABC transporter transmembrane region 2 BED33_RS01040 PF07715 TonB-dependent Receptor Plug Domain BED33_RS01045 PF16220 Domain of unknown function (DUF4880) BED33_RS01045 PF04773 FecR protein BED33_RS01060 PF01206 Sulfurtransferase TusA BED33_RS01065 PF04143 Sulphur transport BED33_RS01070 PF01312 FlhB HrpN YscU SpaS Family BED33_RS01075 PF01311 Bacterial export proteins, family 1 BED33_RS01080 PF01313 Bacterial export proteins, family 3 BED33_RS01085 PF00813 FliP family BED33_RS01090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BED33_RS01110 PF00771 FHIPEP family BED33_RS01120 PF07201 HrpJ-like domain BED33_RS01135 PF01514 Secretory protein of YscJ/FliF family BED33_RS01155 PF14525 AraC-binding-like domain BED33_RS01155 PF12833 Helix-turn-helix domain BED33_RS01180 PF04888 Secretion system effector C (SseC) like family BED33_RS01210 PF00263 Bacterial type II and III secretion system protein BED33_RS01210 PF03958 Bacterial type II/III secretion system short domain BED33_RS01225 PF00072 Response regulator receiver domain BED33_RS01225 PF00196 Bacterial regulatory proteins, luxR family BED33_RS01230 PF00375 Sodium:dicarboxylate symporter family BED33_RS01235 PF13193 AMP-binding enzyme C-terminal domain BED33_RS01235 PF00501 AMP-binding enzyme BED33_RS01235 PF16177 Acetyl-coenzyme A synthetase N-terminus BED33_RS01240 PF04341 Protein of unknown function, DUF485 BED33_RS01245 PF00474 Sodium:solute symporter family BED33_RS01290 PF02142 MGS-like domain BED33_RS01290 PF01808 AICARFT/IMPCHase bienzyme BED33_RS01295 PF02843 Phosphoribosylglycinamide synthetase, C domain BED33_RS01295 PF02844 Phosphoribosylglycinamide synthetase, N domain BED33_RS01295 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BED33_RS01300 PF07356 Protein of unknown function (DUF1481) BED33_RS01305 PF00216 Bacterial DNA-binding protein BED33_RS01310 PF04222 Protein of unknown function (DUF416) BED33_RS01315 PF04493 Endonuclease V BED33_RS01320 PF01208 Uroporphyrinogen decarboxylase (URO-D) BED33_RS01325 PF00293 NUDIX domain BED33_RS01325 PF09297 NADH pyrophosphatase zinc ribbon domain BED33_RS01330 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ BED33_RS01335 PF13667 ThiC-associated domain BED33_RS01335 PF01964 Radical SAM ThiC family BED33_RS01340 PF02581 Thiamine monophosphate synthase BED33_RS01345 PF00899 ThiF family BED33_RS01350 PF02597 ThiS family BED33_RS01355 PF05690 Thiazole biosynthesis protein ThiG BED33_RS01360 PF06968 Biotin and Thiamin Synthesis associated domain BED33_RS01360 PF04055 Radical SAM superfamily BED33_RS01365 PF01548 Transposase BED33_RS01365 PF02371 Transposase IS116/IS110/IS902 family BED33_RS01370 PF04983 RNA polymerase Rpb1, domain 3 BED33_RS01370 PF00623 RNA polymerase Rpb1, domain 2 BED33_RS01370 PF05000 RNA polymerase Rpb1, domain 4 BED33_RS01370 PF04998 RNA polymerase Rpb1, domain 5 BED33_RS01370 PF04997 RNA polymerase Rpb1, domain 1 BED33_RS01375 PF04560 RNA polymerase Rpb2, domain 7 BED33_RS01375 PF04563 RNA polymerase beta subunit BED33_RS01375 PF04561 RNA polymerase Rpb2, domain 2 BED33_RS01375 PF04565 RNA polymerase Rpb2, domain 3 BED33_RS01375 PF10385 RNA polymerase beta subunit external 1 domain BED33_RS01375 PF00562 RNA polymerase Rpb2, domain 6 BED33_RS01380 PF16320 Ribosomal protein L7/L12 dimerisation domain BED33_RS01380 PF00542 Ribosomal protein L7/L12 C-terminal domain BED33_RS01385 PF00466 Ribosomal protein L10 BED33_RS01390 PF00687 Ribosomal protein L1p/L10e family BED33_RS01395 PF00298 Ribosomal protein L11, RNA binding domain BED33_RS01395 PF03946 Ribosomal protein L11, N-terminal domain BED33_RS01400 PF00467 KOW motif BED33_RS01400 PF02357 Transcription termination factor nusG BED33_RS01405 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BED33_RS01410 PF03143 Elongation factor Tu C-terminal domain BED33_RS01410 PF03144 Elongation factor Tu domain 2 BED33_RS01410 PF00009 Elongation factor Tu GTP binding domain BED33_RS01445 PF00485 Phosphoribulokinase / Uridine kinase family BED33_RS01450 PF02237 Biotin protein ligase C terminal domain BED33_RS01450 PF03099 Biotin/lipoate A/B protein ligase family BED33_RS01450 PF08279 HTH domain BED33_RS01455 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BED33_RS01455 PF01565 FAD binding domain BED33_RS01460 PF02371 Transposase IS116/IS110/IS902 family BED33_RS01460 PF01548 Transposase BED33_RS01490 PF12724 Flavodoxin domain BED33_RS01495 PF02386 Cation transport protein BED33_RS01500 PF09186 Domain of unknown function (DUF1949) BED33_RS01500 PF01205 Uncharacterized protein family UPF0029 BED33_RS01505 PF00557 Metallopeptidase family M24 BED33_RS01510 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BED33_RS01510 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BED33_RS01510 PF00378 Enoyl-CoA hydratase/isomerase BED33_RS01515 PF00108 Thiolase, N-terminal domain BED33_RS01515 PF02803 Thiolase, C-terminal domain BED33_RS01520 PF00175 Oxidoreductase NAD-binding domain BED33_RS01520 PF00970 Oxidoreductase FAD-binding domain BED33_RS01525 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BED33_RS01530 PF02357 Transcription termination factor nusG BED33_RS01535 PF00490 Delta-aminolevulinic acid dehydratase BED33_RS01540 PF01026 TatD related DNase BED33_RS01545 PF00902 Sec-independent protein translocase protein (TatC) BED33_RS01555 PF02416 mttA/Hcf106 family BED33_RS01560 PF03109 ABC1 family BED33_RS01565 PF02036 SCP-2 sterol transfer family BED33_RS01570 PF01209 ubiE/COQ5 methyltransferase family BED33_RS01580 PF09335 SNARE associated Golgi protein BED33_RS01585 PF13722 5TM C-terminal transporter carbon starvation CstA BED33_RS01585 PF02554 Carbon starvation protein CstA BED33_RS01595 PF01048 Phosphorylase superfamily BED33_RS01600 PF01738 Dienelactone hydrolase family BED33_RS01605 PF01717 Cobalamin-independent synthase, Catalytic domain BED33_RS01605 PF08267 Cobalamin-independent synthase, N-terminal domain BED33_RS01610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS01610 PF03466 LysR substrate binding domain BED33_RS01615 PF00892 EamA-like transporter family BED33_RS01620 PF03547 Membrane transport protein BED33_RS01625 PF03009 Glycerophosphoryl diester phosphodiesterase family BED33_RS01630 PF17912 MalK OB fold domain BED33_RS01630 PF00005 ABC transporter BED33_RS01635 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS01640 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS01645 PF13416 Bacterial extracellular solute-binding protein BED33_RS01680 PF00005 ABC transporter BED33_RS01685 PF00005 ABC transporter BED33_RS01685 PF12399 Branched-chain amino acid ATP-binding cassette transporter BED33_RS01690 PF11862 Domain of unknown function (DUF3382) BED33_RS01690 PF02653 Branched-chain amino acid transport system / permease component BED33_RS01695 PF02653 Branched-chain amino acid transport system / permease component BED33_RS01700 PF13458 Periplasmic binding protein BED33_RS01705 PF12568 Acetyltransferase (GNAT) domain, PanZ BED33_RS01720 PF00140 Sigma-70 factor, region 1.2 BED33_RS01720 PF04545 Sigma-70, region 4 BED33_RS01720 PF04542 Sigma-70 region 2 BED33_RS01725 PF02687 FtsX-like permease family BED33_RS01725 PF18075 FtsX extracellular domain BED33_RS01730 PF00005 ABC transporter BED33_RS01735 PF02881 SRP54-type protein, helical bundle domain BED33_RS01735 PF00448 SRP54-type protein, GTPase domain BED33_RS01745 PF06611 Protein of unknown function (DUF1145) BED33_RS01760 PF07947 YhhN family BED33_RS01765 PF00403 Heavy-metal-associated domain BED33_RS01770 PF01206 Sulfurtransferase TusA BED33_RS01775 PF02592 Putative vitamin uptake transporter BED33_RS01780 PF08786 DcrB BED33_RS01785 PF02754 Cysteine-rich domain BED33_RS01785 PF13183 4Fe-4S dicluster domain BED33_RS01790 PF00890 FAD binding domain BED33_RS01795 PF01266 FAD dependent oxidoreductase BED33_RS01795 PF04324 BFD-like [2Fe-2S] binding domain BED33_RS01800 PF07690 Major Facilitator Superfamily BED33_RS01805 PF03009 Glycerophosphoryl diester phosphodiesterase family BED33_RS01815 PF12146 Serine aminopeptidase, S33 BED33_RS01820 PF01810 LysE type translocator BED33_RS01825 PF01810 LysE type translocator BED33_RS01830 PF09382 RQC domain BED33_RS01830 PF16124 RecQ zinc-binding BED33_RS01830 PF00570 HRDC domain BED33_RS01830 PF00271 Helicase conserved C-terminal domain BED33_RS01830 PF00270 DEAD/DEAH box helicase BED33_RS01835 PF02253 Phospholipase A1 BED33_RS01840 PF03061 Thioesterase superfamily BED33_RS01845 PF00892 EamA-like transporter family BED33_RS01850 PF01544 CorA-like Mg2+ transporter protein BED33_RS01855 PF09370 Phosphoenolpyruvate hydrolase-like BED33_RS01870 PF00580 UvrD/REP helicase N-terminal domain BED33_RS01870 PF13361 UvrD-like helicase C-terminal domain BED33_RS01875 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS01880 PF02899 Phage integrase, N-terminal SAM-like domain BED33_RS01880 PF00589 Phage integrase family BED33_RS01885 PF04340 Protein of unknown function, DUF484 BED33_RS01890 PF01678 Diaminopimelate epimerase BED33_RS01895 PF13627 Prokaryotic lipoprotein-attachment site BED33_RS01900 PF01491 Frataxin-like domain BED33_RS01910 PF01295 Adenylate cyclase, class-I BED33_RS01910 PF12633 Adenylate cyclase NT domain BED33_RS01915 PF03900 Porphobilinogen deaminase, C-terminal domain BED33_RS01915 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BED33_RS01920 PF02602 Uroporphyrinogen-III synthase HemD BED33_RS01925 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase BED33_RS01930 PF07219 HemY protein N-terminus BED33_RS01930 PF07719 Tetratricopeptide repeat BED33_RS01935 PF02371 Transposase IS116/IS110/IS902 family BED33_RS01935 PF01548 Transposase BED33_RS01965 PF03808 Glycosyl transferase WecB/TagA/CpsF family BED33_RS01970 PF06899 WzyE protein, O-antigen assembly polymerase BED33_RS01975 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 BED33_RS01980 PF01943 Polysaccharide biosynthesis protein BED33_RS01985 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BED33_RS01995 PF00483 Nucleotidyl transferase BED33_RS02000 PF16363 GDP-mannose 4,6 dehydratase BED33_RS02005 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BED33_RS02005 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BED33_RS02005 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BED33_RS02010 PF02350 UDP-N-acetylglucosamine 2-epimerase BED33_RS02015 PF02706 Chain length determinant protein BED33_RS02020 PF00953 Glycosyl transferase family 4 BED33_RS02025 PF02371 Transposase IS116/IS110/IS902 family BED33_RS02025 PF01548 Transposase BED33_RS02030 PF07497 Rho termination factor, RNA-binding domain BED33_RS02030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED33_RS02030 PF07498 Rho termination factor, N-terminal domain BED33_RS02035 PF00085 Thioredoxin BED33_RS02040 PF00271 Helicase conserved C-terminal domain BED33_RS02040 PF00270 DEAD/DEAH box helicase BED33_RS02045 PF02541 Ppx/GppA phosphatase family BED33_RS02050 PF00295 Glycosyl hydrolases family 28 BED33_RS02055 PF00580 UvrD/REP helicase N-terminal domain BED33_RS02055 PF13361 UvrD-like helicase C-terminal domain BED33_RS02070 PF13358 DDE superfamily endonuclease BED33_RS02070 PF13592 Winged helix-turn helix BED33_RS02090 PF02661 Fic/DOC family BED33_RS02090 PF13784 Fic/DOC family N-terminal BED33_RS02125 PF13356 Arm DNA-binding domain BED33_RS02125 PF00589 Phage integrase family BED33_RS02125 PF14659 Phage integrase, N-terminal SAM-like domain BED33_RS02130 PF12833 Helix-turn-helix domain BED33_RS02135 PF02653 Branched-chain amino acid transport system / permease component BED33_RS02140 PF00005 ABC transporter BED33_RS02145 PF13407 Periplasmic binding protein domain BED33_RS02155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED33_RS02155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED33_RS02160 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS02160 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS02175 PF01757 Acyltransferase family BED33_RS02180 PF07690 Major Facilitator Superfamily BED33_RS02185 PF09107 Elongation factor SelB, winged helix BED33_RS02185 PF09106 Elongation factor SelB, winged helix BED33_RS02185 PF00009 Elongation factor Tu GTP binding domain BED33_RS02185 PF03144 Elongation factor Tu domain 2 BED33_RS02190 PF03841 L-seryl-tRNA selenium transferase BED33_RS02190 PF12390 Selenocysteine synthase N terminal BED33_RS02195 PF04216 Protein involved in formate dehydrogenase formation BED33_RS02200 PF01292 Prokaryotic cytochrome b561 BED33_RS02205 PF09163 Formate dehydrogenase N, transmembrane BED33_RS02205 PF13247 4Fe-4S dicluster domain BED33_RS02210 PF01568 Molydopterin dinucleotide binding domain BED33_RS02210 PF00384 Molybdopterin oxidoreductase BED33_RS02210 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS02215 PF01568 Molydopterin dinucleotide binding domain BED33_RS02215 PF00384 Molybdopterin oxidoreductase BED33_RS02215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS02220 PF02634 FdhD/NarQ family BED33_RS02225 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BED33_RS02225 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BED33_RS02230 PF02203 Tar ligand binding domain homologue BED33_RS02230 PF00672 HAMP domain BED33_RS02230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS02235 PF03473 MOSC domain BED33_RS02235 PF03475 3-alpha domain BED33_RS02240 PF01850 PIN domain BED33_RS02245 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BED33_RS02250 PF10928 Protein of unknown function (DUF2810) BED33_RS02255 PF00155 Aminotransferase class I and II BED33_RS02255 PF00392 Bacterial regulatory proteins, gntR family BED33_RS02265 PF05068 Mannitol repressor BED33_RS02270 PF01232 Mannitol dehydrogenase Rossmann domain BED33_RS02270 PF08125 Mannitol dehydrogenase C-terminal domain BED33_RS02275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED33_RS02275 PF02378 Phosphotransferase system, EIIC BED33_RS02275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED33_RS02280 PF11254 Protein of unknown function (DUF3053) BED33_RS02285 PF05746 DALR anticodon binding domain BED33_RS02285 PF02092 Glycyl-tRNA synthetase beta subunit BED33_RS02290 PF02091 Glycyl-tRNA synthetase alpha subunit BED33_RS02295 PF03352 Methyladenine glycosylase BED33_RS02300 PF00583 Acetyltransferase (GNAT) family BED33_RS02325 PF07690 Major Facilitator Superfamily BED33_RS02330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED33_RS02330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_RS02335 PF00128 Alpha amylase, catalytic domain BED33_RS02340 PF00155 Aminotransferase class I and II BED33_RS02345 PF06826 Predicted Permease Membrane Region BED33_RS02345 PF02080 TrkA-C domain BED33_RS02350 PF01548 Transposase BED33_RS02350 PF02371 Transposase IS116/IS110/IS902 family BED33_RS02355 PF07690 Major Facilitator Superfamily BED33_RS02370 PF00175 Oxidoreductase NAD-binding domain BED33_RS02370 PF00970 Oxidoreductase FAD-binding domain BED33_RS02375 PF05656 Protein of unknown function (DUF805) BED33_RS02380 PF07305 Protein of unknown function (DUF1454) BED33_RS02385 PF00121 Triosephosphate isomerase BED33_RS02400 PF00365 Phosphofructokinase BED33_RS02405 PF01545 Cation efflux family BED33_RS02405 PF16916 Dimerisation domain of Zinc Transporter BED33_RS02410 PF07813 LTXXQ motif family protein BED33_RS02415 PF00486 Transcriptional regulatory protein, C terminal BED33_RS02415 PF00072 Response regulator receiver domain BED33_RS02420 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS02420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS02420 PF16527 Two-component sensor protein CpxA, periplasmic domain BED33_RS02420 PF00672 HAMP domain BED33_RS02425 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BED33_RS02425 PF12833 Helix-turn-helix domain BED33_RS02425 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BED33_RS02425 PF02805 Metal binding domain of Ada BED33_RS02430 PF00588 SpoU rRNA Methylase family BED33_RS02435 PF06426 Serine acetyltransferase, N-terminal BED33_RS02435 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS02440 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BED33_RS02440 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BED33_RS02445 PF02556 Preprotein translocase subunit SecB BED33_RS02450 PF00462 Glutaredoxin BED33_RS02455 PF00581 Rhodanese-like domain BED33_RS02460 PF01676 Metalloenzyme superfamily BED33_RS02460 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BED33_RS02465 PF01551 Peptidase family M23 BED33_RS02470 PF04748 Divergent polysaccharide deacetylase BED33_RS02485 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS02485 PF00107 Zinc-binding dehydrogenase BED33_RS02490 PF00155 Aminotransferase class I and II BED33_RS02495 PF01370 NAD dependent epimerase/dehydratase family BED33_RS02500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED33_RS02505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED33_RS02510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) BED33_RS02515 PF00535 Glycosyl transferase family 2 BED33_RS02520 PF01467 Cytidylyltransferase-like BED33_RS02525 PF06827 Zinc finger found in FPG and IleRS BED33_RS02525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BED33_RS02525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BED33_RS02530 PF00471 Ribosomal protein L33 BED33_RS02535 PF00830 Ribosomal L28 family BED33_RS02540 PF04002 RadC-like JAB domain BED33_RS02545 PF04127 DNA / pantothenate metabolism flavoprotein BED33_RS02545 PF02441 Flavoprotein BED33_RS02550 PF00692 dUTPase BED33_RS02555 PF00440 Bacterial regulatory proteins, tetR family BED33_RS02560 PF00156 Phosphoribosyl transferase domain BED33_RS02565 PF01138 3' exoribonuclease family, domain 1 BED33_RS02565 PF03725 3' exoribonuclease family, domain 2 BED33_RS02570 PF08340 Domain of unknown function (DUF1732) BED33_RS02570 PF03755 YicC-like family, N-terminal region BED33_RS02575 PF00589 Phage integrase family BED33_RS02575 PF13356 Arm DNA-binding domain BED33_RS02595 PF10548 P22AR C-terminal domain BED33_RS02595 PF08346 AntA/AntB antirepressor BED33_RS02675 PF13426 PAS domain BED33_RS02675 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS02675 PF00563 EAL domain BED33_RS02680 PF00378 Enoyl-CoA hydratase/isomerase BED33_RS02685 PF07670 Nucleoside recognition BED33_RS02685 PF01773 Na+ dependent nucleoside transporter N-terminus BED33_RS02685 PF07662 Na+ dependent nucleoside transporter C-terminus BED33_RS02690 PF13358 DDE superfamily endonuclease BED33_RS02690 PF13592 Winged helix-turn helix BED33_RS02700 PF03458 UPF0126 domain BED33_RS02710 PF00625 Guanylate kinase BED33_RS02715 PF01192 RNA polymerase Rpb6 BED33_RS02720 PF04607 Region found in RelA / SpoT proteins BED33_RS02720 PF13291 ACT domain BED33_RS02720 PF02824 TGS domain BED33_RS02725 PF00588 SpoU rRNA Methylase family BED33_RS02725 PF12105 SpoU, rRNA methylase, C-terminal BED33_RS02730 PF00271 Helicase conserved C-terminal domain BED33_RS02730 PF00270 DEAD/DEAH box helicase BED33_RS02730 PF17191 RecG wedge domain BED33_RS02735 PF03616 Sodium/glutamate symporter BED33_RS02740 PF00860 Permease family BED33_RS02745 PF05170 AsmA family BED33_RS02760 PF13693 Winged helix-turn-helix DNA-binding BED33_RS02765 PF00583 Acetyltransferase (GNAT) family BED33_RS02765 PF09500 Putative thioesterase (yiiD_Cterm) BED33_RS02770 PF02580 D-Tyr-tRNA(Tyr) deacylase BED33_RS02775 PF03631 Virulence factor BrkB BED33_RS02780 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS02785 PF00679 Elongation factor G C-terminus BED33_RS02785 PF00009 Elongation factor Tu GTP binding domain BED33_RS02785 PF03144 Elongation factor Tu domain 2 BED33_RS02790 PF03951 Glutamine synthetase, beta-Grasp domain BED33_RS02790 PF00120 Glutamine synthetase, catalytic domain BED33_RS02800 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS02800 PF00989 PAS fold BED33_RS02800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS02805 PF02954 Bacterial regulatory protein, Fis family BED33_RS02805 PF00158 Sigma-54 interaction domain BED33_RS02805 PF00072 Response regulator receiver domain BED33_RS02810 PF04055 Radical SAM superfamily BED33_RS02810 PF06969 HemN C-terminal domain BED33_RS02815 PF04220 Der GTPase activator (YihI) BED33_RS02820 PF01926 50S ribosome-binding GTPase BED33_RS02825 PF00476 DNA polymerase family A BED33_RS02825 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BED33_RS02825 PF01367 5'-3' exonuclease, C-terminal SAM fold BED33_RS02825 PF01612 3'-5' exonuclease BED33_RS02830 PF01323 DSBA-like thioredoxin domain BED33_RS02835 PF01636 Phosphotransferase enzyme family BED33_RS02840 PF06288 Protein of unknown function (DUF1040) BED33_RS02845 PF12804 MobA-like NTP transferase domain BED33_RS02850 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BED33_RS02855 PF13333 Integrase core domain BED33_RS02855 PF13276 HTH-like domain BED33_RS02855 PF00665 Integrase core domain BED33_RS02885 PF07729 FCD domain BED33_RS02885 PF00392 Bacterial regulatory proteins, gntR family BED33_RS02890 PF07690 Major Facilitator Superfamily BED33_RS02895 PF00356 Bacterial regulatory proteins, lacI family BED33_RS02900 PF00294 pfkB family carbohydrate kinase BED33_RS02905 PF13407 Periplasmic binding protein domain BED33_RS02910 PF02653 Branched-chain amino acid transport system / permease component BED33_RS02915 PF00005 ABC transporter BED33_RS02920 PF05025 RbsD / FucU transport protein family BED33_RS02925 PF02705 K+ potassium transporter BED33_RS02930 PF12592 Protein of unknown function (DUF3763) BED33_RS02930 PF07728 AAA domain (dynein-related subfamily) BED33_RS02930 PF17868 AAA lid domain BED33_RS02935 PF05762 VWA domain containing CoxE-like protein BED33_RS02945 PF03590 Aspartate-ammonia ligase BED33_RS02950 PF01037 Lrp/AsnC ligand binding domain BED33_RS02955 PF00258 Flavodoxin BED33_RS02960 PF13932 GidA associated domain BED33_RS02960 PF01134 Glucose inhibited division protein A BED33_RS02965 PF02527 rRNA small subunit methyltransferase G BED33_RS02970 PF03899 ATP synthase I chain BED33_RS02975 PF00119 ATP synthase A chain BED33_RS02980 PF00137 ATP synthase subunit C BED33_RS02985 PF00430 ATP synthase B/B' CF(0) BED33_RS02990 PF00213 ATP synthase delta (OSCP) subunit BED33_RS02995 PF00306 ATP synthase alpha/beta chain, C terminal domain BED33_RS02995 PF02874 ATP synthase alpha/beta family, beta-barrel domain BED33_RS02995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED33_RS03000 PF00231 ATP synthase BED33_RS03005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED33_RS03005 PF02874 ATP synthase alpha/beta family, beta-barrel domain BED33_RS03010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BED33_RS03010 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BED33_RS03015 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS03015 PF12804 MobA-like NTP transferase domain BED33_RS03020 PF01380 SIS domain BED33_RS03025 PF12849 PBP superfamily domain BED33_RS03030 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS03035 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS03040 PF00005 ABC transporter BED33_RS03045 PF01895 PhoU domain BED33_RS03055 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS03065 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS03070 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS03075 PF00860 Permease family BED33_RS03085 PF00196 Bacterial regulatory proteins, luxR family BED33_RS03085 PF00072 Response regulator receiver domain BED33_RS03090 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS03095 PF03358 NADPH-dependent FMN reductase BED33_RS03100 PF00672 HAMP domain BED33_RS03100 PF02203 Tar ligand binding domain homologue BED33_RS03100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS03105 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS03110 PF09383 NIL domain BED33_RS03110 PF00005 ABC transporter BED33_RS03120 PF12241 Trans-2-enoyl-CoA reductase catalytic region BED33_RS03120 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase BED33_RS03120 PF07055 Enoyl reductase FAD binding domain BED33_RS03125 PF12631 MnmE helical domain BED33_RS03125 PF01926 50S ribosome-binding GTPase BED33_RS03125 PF10396 GTP-binding protein TrmE N-terminus BED33_RS03130 PF14849 YidC periplasmic domain BED33_RS03130 PF02096 60Kd inner membrane protein BED33_RS03135 PF01809 Putative membrane protein insertion efficiency factor BED33_RS03140 PF00825 Ribonuclease P BED33_RS03145 PF00468 Ribosomal protein L34 BED33_RS03150 PF00308 Bacterial dnaA protein BED33_RS03150 PF08299 Bacterial dnaA protein helix-turn-helix BED33_RS03150 PF11638 DnaA N-terminal domain BED33_RS03155 PF02767 DNA polymerase III beta subunit, central domain BED33_RS03155 PF02768 DNA polymerase III beta subunit, C-terminal domain BED33_RS03155 PF00712 DNA polymerase III beta subunit, N-terminal domain BED33_RS03160 PF02463 RecF/RecN/SMC N terminal domain BED33_RS03165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS03165 PF18053 DNA gyrase B subunit insert domain BED33_RS03165 PF01751 Toprim domain BED33_RS03165 PF00986 DNA gyrase B subunit, carboxyl terminus BED33_RS03165 PF00204 DNA gyrase B BED33_RS03175 PF02423 Ornithine cyclodeaminase/mu-crystallin family BED33_RS03180 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS03185 PF07676 WD40-like Beta Propeller Repeat BED33_RS03185 PF12566 Protein of unknown function (DUF3748) BED33_RS03190 PF07119 Protein of unknown function (DUF1375) BED33_RS03195 PF00011 Hsp20/alpha crystallin family BED33_RS03200 PF00011 Hsp20/alpha crystallin family BED33_RS03205 PF01548 Transposase BED33_RS03205 PF02371 Transposase IS116/IS110/IS902 family BED33_RS03215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED33_RS03215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED33_RS03220 PF00230 Major intrinsic protein BED33_RS03230 PF06005 Cell division protein ZapB BED33_RS03235 PF03737 Aldolase/RraA BED33_RS03240 PF01040 UbiA prenyltransferase family BED33_RS03245 PF07724 AAA domain (Cdc48 subfamily) BED33_RS03245 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS03245 PF10431 C-terminal, D2-small domain, of ClpB protein BED33_RS03250 PF00227 Proteasome subunit BED33_RS03255 PF05036 Sporulation related domain BED33_RS03260 PF00356 Bacterial regulatory proteins, lacI family BED33_RS03265 PF00271 Helicase conserved C-terminal domain BED33_RS03265 PF00270 DEAD/DEAH box helicase BED33_RS03265 PF17764 3′ DNA-binding domain (3′BD) BED33_RS03265 PF18074 Primosomal protein N C-terminal domain BED33_RS03265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BED33_RS03270 PF01197 Ribosomal protein L31 BED33_RS03275 PF01340 Met Apo-repressor, MetJ BED33_RS03280 PF01053 Cys/Met metabolism PLP-dependent enzyme BED33_RS03285 PF00742 Homoserine dehydrogenase BED33_RS03285 PF00696 Amino acid kinase family BED33_RS03285 PF03447 Homoserine dehydrogenase, NAD binding domain BED33_RS03290 PF02219 Methylenetetrahydrofolate reductase BED33_RS03295 PF00311 Phosphoenolpyruvate carboxylase BED33_RS03300 PF01546 Peptidase family M20/M25/M40 BED33_RS03300 PF07687 Peptidase dimerisation domain BED33_RS03305 PF01118 Semialdehyde dehydrogenase, NAD binding domain BED33_RS03305 PF02774 Semialdehyde dehydrogenase, dimerisation domain BED33_RS03310 PF00696 Amino acid kinase family BED33_RS03315 PF14698 Argininosuccinate lyase C-terminal BED33_RS03315 PF00206 Lyase BED33_RS03320 PF00593 TonB dependent receptor BED33_RS03320 PF07715 TonB-dependent Receptor Plug Domain BED33_RS03345 PF00005 ABC transporter BED33_RS03345 PF00664 ABC transporter transmembrane region BED33_RS03350 PF00529 HlyD membrane-fusion protein of T1SS BED33_RS03370 PF00462 Glutaredoxin BED33_RS03370 PF08534 Redoxin BED33_RS03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS03375 PF03466 LysR substrate binding domain BED33_RS03380 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS03380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED33_RS03385 PF00440 Bacterial regulatory proteins, tetR family BED33_RS03390 PF07226 Protein of unknown function (DUF1422) BED33_RS03395 PF05958 tRNA (Uracil-5-)-methyltransferase BED33_RS03400 PF00593 TonB dependent receptor BED33_RS03400 PF07715 TonB-dependent Receptor Plug Domain BED33_RS03405 PF01177 Asp/Glu/Hydantoin racemase BED33_RS03445 PF13407 Periplasmic binding protein domain BED33_RS03450 PF00005 ABC transporter BED33_RS03455 PF02653 Branched-chain amino acid transport system / permease component BED33_RS03460 PF02653 Branched-chain amino acid transport system / permease component BED33_RS03465 PF03466 LysR substrate binding domain BED33_RS03465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS03470 PF04219 Protein of unknown function, DUF BED33_RS03475 PF01078 Magnesium chelatase, subunit ChlI BED33_RS03475 PF13335 Magnesium chelatase, subunit ChlI C-terminal BED33_RS03480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS03480 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS03480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS03490 PF01063 Amino-transferase class IV BED33_RS03495 PF00920 Dehydratase family BED33_RS03500 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS03500 PF00585 C-terminal regulatory domain of Threonine dehydratase BED33_RS03515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS03515 PF03466 LysR substrate binding domain BED33_RS03520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BED33_RS03520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BED33_RS03530 PF01320 Colicin immunity protein / pyocin immunity protein BED33_RS03535 PF01320 Colicin immunity protein / pyocin immunity protein BED33_RS03545 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS03545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS03560 PF13953 PapC C-terminal domain BED33_RS03560 PF00577 Outer membrane usher protein BED33_RS03560 PF13954 PapC N-terminal domain BED33_RS03565 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS03565 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS03570 PF13358 DDE superfamily endonuclease BED33_RS03570 PF13592 Winged helix-turn helix BED33_RS03575 PF00480 ROK family BED33_RS03580 PF00356 Bacterial regulatory proteins, lacI family BED33_RS03595 PF06755 CbtA_toxin of type IV toxin-antitoxin system BED33_RS03605 PF00872 Transposase, Mutator family BED33_RS03610 PF12146 Serine aminopeptidase, S33 BED33_RS03615 PF05860 haemagglutination activity domain BED33_RS03615 PF13332 Hemagglutinin repeat BED33_RS03615 PF13018 Extended Signal Peptide of Type V secretion system BED33_RS03615 PF04829 Pre-toxin domain with VENN motif BED33_RS03630 PF13332 Hemagglutinin repeat BED33_RS03630 PF02661 Fic/DOC family BED33_RS03630 PF13018 Extended Signal Peptide of Type V secretion system BED33_RS03630 PF05860 haemagglutination activity domain BED33_RS03630 PF03543 Yersinia/Haemophilus virulence surface antigen BED33_RS03645 PF07730 Histidine kinase BED33_RS03645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS03645 PF05231 MASE1 BED33_RS03650 PF00072 Response regulator receiver domain BED33_RS03650 PF00196 Bacterial regulatory proteins, luxR family BED33_RS03655 PF00884 Sulfatase BED33_RS03655 PF08019 Phosphoethanolamine transferase EptA/EptB BED33_RS03660 PF02566 OsmC-like protein BED33_RS03665 PF01548 Transposase BED33_RS03665 PF02371 Transposase IS116/IS110/IS902 family BED33_RS03670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS03675 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS03680 PF12911 N-terminal TM domain of oligopeptide transport permease C BED33_RS03680 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS03685 PF00005 ABC transporter BED33_RS03685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS03690 PF00005 ABC transporter BED33_RS03690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS03695 PF11658 Cellulose biosynthesis protein BcsG BED33_RS03700 PF11120 Cellulose biosynthesis protein BcsF BED33_RS03705 PF10995 Cellulose biosynthesis GIL BED33_RS03715 PF06564 Cellulose biosynthesis protein BcsQ BED33_RS03720 PF03552 Cellulose synthase BED33_RS03720 PF00535 Glycosyl transferase family 2 BED33_RS03720 PF07238 PilZ domain BED33_RS03725 PF03170 Bacterial cellulose synthase subunit BED33_RS03730 PF01270 Glycosyl hydrolases family 8 BED33_RS03735 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) BED33_RS03745 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS03745 PF00672 HAMP domain BED33_RS03745 PF17154 Gammaproteobacterial periplasmic sensor domain BED33_RS03745 PF00563 EAL domain BED33_RS03750 PF06178 Oligogalacturonate-specific porin protein (KdgM) BED33_RS03755 PF06917 Periplasmic pectate lyase BED33_RS03765 PF00375 Sodium:dicarboxylate symporter family BED33_RS03770 PF00675 Insulinase (Peptidase family M16) BED33_RS03770 PF05193 Peptidase M16 inactive domain BED33_RS03775 PF00294 pfkB family carbohydrate kinase BED33_RS03780 PF01361 Tautomerase enzyme BED33_RS03785 PF00563 EAL domain BED33_RS03795 PF02611 CDP-diacylglycerol pyrophosphatase BED33_RS03800 PF03631 Virulence factor BrkB BED33_RS03805 PF03797 Autotransporter beta-domain BED33_RS03810 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS03810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED33_RS03815 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ BED33_RS03820 PF01432 Peptidase family M3 BED33_RS03825 PF04445 Putative SAM-dependent methyltransferase BED33_RS03830 PF00413 Matrixin BED33_RS03830 PF08548 Peptidase M10 serralysin C terminal BED33_RS03830 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) BED33_RS03835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BED33_RS03835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BED33_RS03840 PF00582 Universal stress protein family BED33_RS03845 PF02371 Transposase IS116/IS110/IS902 family BED33_RS03845 PF01548 Transposase BED33_RS03850 PF10625 Universal stress protein B (UspB) BED33_RS03855 PF01384 Phosphate transporter family BED33_RS03865 PF08721 TnsA endonuclease C terminal BED33_RS03865 PF08722 TnsA endonuclease N terminal BED33_RS03870 PF00665 Integrase core domain BED33_RS03875 PF13401 AAA domain BED33_RS03875 PF11426 Tn7 transposition regulator TnsC BED33_RS03900 PF13610 DDE domain BED33_RS03905 PF02190 ATP-dependent protease La (LON) substrate-binding domain BED33_RS03905 PF05362 Lon protease (S16) C-terminal proteolytic domain BED33_RS03905 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS03925 PF00375 Sodium:dicarboxylate symporter family BED33_RS03940 PF07476 Methylaspartate ammonia-lyase C-terminus BED33_RS03940 PF05034 Methylaspartate ammonia-lyase N-terminus BED33_RS03945 PF06368 Methylaspartate mutase E chain (MutE) BED33_RS03960 PF00288 GHMP kinases N terminal domain BED33_RS03965 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS03965 PF14824 Sirohaem biosynthesis protein central BED33_RS03965 PF10414 Sirohaem synthase dimerisation region BED33_RS03970 PF03466 LysR substrate binding domain BED33_RS03970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS03975 PF05683 Fumarase C-terminus BED33_RS03975 PF05681 Fumarate hydratase (Fumerase) BED33_RS03980 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BED33_RS03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS03995 PF03466 LysR substrate binding domain BED33_RS04000 PF07690 Major Facilitator Superfamily BED33_RS04005 PF00171 Aldehyde dehydrogenase family BED33_RS04010 PF04962 KduI/IolB family BED33_RS04020 PF00294 pfkB family carbohydrate kinase BED33_RS04025 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS04025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS04025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS04030 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BED33_RS04030 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED33_RS04035 PF01261 Xylose isomerase-like TIM barrel BED33_RS04040 PF00583 Acetyltransferase (GNAT) family BED33_RS04045 PF17954 Quercetinase C-terminal cupin domain BED33_RS04045 PF02678 Pirin BED33_RS04050 PF00356 Bacterial regulatory proteins, lacI family BED33_RS04050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED33_RS04055 PF02447 GntP family permease BED33_RS04060 PF01202 Shikimate kinase BED33_RS04065 PF01914 MarC family integral membrane protein BED33_RS04070 PF01118 Semialdehyde dehydrogenase, NAD binding domain BED33_RS04070 PF02774 Semialdehyde dehydrogenase, dimerisation domain BED33_RS04075 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS04075 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS04075 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS04080 PF03306 Alpha-acetolactate decarboxylase BED33_RS04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS04085 PF03466 LysR substrate binding domain BED33_RS04090 PF07694 5TMR of 5TMR-LYT BED33_RS04090 PF06580 Histidine kinase BED33_RS04095 PF02806 Alpha amylase, C-terminal all-beta domain BED33_RS04095 PF00128 Alpha amylase, catalytic domain BED33_RS04095 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BED33_RS04100 PF00128 Alpha amylase, catalytic domain BED33_RS04100 PF18390 Glycogen debranching enzyme C-terminal domain BED33_RS04100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BED33_RS04105 PF00483 Nucleotidyl transferase BED33_RS04110 PF00534 Glycosyl transferases group 1 BED33_RS04110 PF08323 Starch synthase catalytic domain BED33_RS04115 PF00343 Carbohydrate phosphorylase BED33_RS04120 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BED33_RS04120 PF01266 FAD dependent oxidoreductase BED33_RS04130 PF02371 Transposase IS116/IS110/IS902 family BED33_RS04130 PF01548 Transposase BED33_RS04135 PF08220 DeoR-like helix-turn-helix domain BED33_RS04135 PF00455 DeoR C terminal sensor domain BED33_RS04140 PF01694 Rhomboid family BED33_RS04140 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease BED33_RS04145 PF00581 Rhodanese-like domain BED33_RS04155 PF17874 MalT-like TPR region BED33_RS04155 PF00196 Bacterial regulatory proteins, luxR family BED33_RS04160 PF00343 Carbohydrate phosphorylase BED33_RS04165 PF02446 4-alpha-glucanotransferase BED33_RS04170 PF01106 NifU-like domain BED33_RS04170 PF01521 Iron-sulphur cluster biosynthesis BED33_RS04175 PF00156 Phosphoribosyl transferase domain BED33_RS04180 PF00561 alpha/beta hydrolase fold BED33_RS04185 PF07338 Protein of unknown function (DUF1471) BED33_RS04190 PF02371 Transposase IS116/IS110/IS902 family BED33_RS04190 PF01548 Transposase BED33_RS04195 PF09012 FeoC like transcriptional regulator BED33_RS04200 PF07664 Ferrous iron transport protein B C terminus BED33_RS04200 PF02421 Ferrous iron transport protein B BED33_RS04200 PF17910 FeoB cytosolic helical domain BED33_RS04200 PF07670 Nucleoside recognition BED33_RS04205 PF04023 FeoA domain BED33_RS04210 PF17674 HHH domain BED33_RS04210 PF16921 Tex protein YqgF-like domain BED33_RS04210 PF09371 Tex-like protein N-terminal domain BED33_RS04210 PF00575 S1 RNA binding domain BED33_RS04235 PF01272 Transcription elongation factor, GreA/GreB, C-term BED33_RS04235 PF03449 Transcription elongation factor, N-terminal BED33_RS04240 PF00072 Response regulator receiver domain BED33_RS04240 PF00486 Transcriptional regulatory protein, C terminal BED33_RS04245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS04245 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS04245 PF00672 HAMP domain BED33_RS04250 PF01293 Phosphoenolpyruvate carboxykinase BED33_RS04255 PF01430 Hsp33 protein BED33_RS04260 PF01479 S4 domain BED33_RS04265 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS04270 PF07095 Intracellular growth attenuator protein IgaA BED33_RS04275 PF00293 NUDIX domain BED33_RS04280 PF00912 Transglycosylase BED33_RS04280 PF17092 Penicillin-binding protein OB-like domain BED33_RS04280 PF00905 Penicillin binding protein transpeptidase domain BED33_RS04305 PF00263 Bacterial type II and III secretion system protein BED33_RS04305 PF03958 Bacterial type II/III secretion system short domain BED33_RS04310 PF01202 Shikimate kinase BED33_RS04315 PF01761 3-dehydroquinate synthase BED33_RS04320 PF05036 Sporulation related domain BED33_RS04325 PF02086 D12 class N6 adenine-specific DNA methyltransferase BED33_RS04330 PF00834 Ribulose-phosphate 3 epimerase family BED33_RS04340 PF00579 tRNA synthetases class I (W and Y) BED33_RS04345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS04345 PF14824 Sirohaem biosynthesis protein central BED33_RS04345 PF10414 Sirohaem synthase dimerisation region BED33_RS04355 PF13806 Rieske-like [2Fe-2S] domain BED33_RS04360 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BED33_RS04360 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS04360 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BED33_RS04360 PF18267 Rubredoxin NAD+ reductase C-terminal domain BED33_RS04360 PF04324 BFD-like [2Fe-2S] binding domain BED33_RS04365 PF07969 Amidohydrolase family BED33_RS04370 PF07690 Major Facilitator Superfamily BED33_RS04375 PF00356 Bacterial regulatory proteins, lacI family BED33_RS04380 PF02056 Family 4 glycosyl hydrolase BED33_RS04380 PF11975 Family 4 glycosyl hydrolase C-terminal domain BED33_RS04385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BED33_RS04390 PF05872 Bacterial protein of unknown function (DUF853) BED33_RS04395 PF00117 Glutamine amidotransferase class-I BED33_RS04400 PF00202 Aminotransferase class-III BED33_RS04410 PF00027 Cyclic nucleotide-binding domain BED33_RS04410 PF13545 Crp-like helix-turn-helix domain BED33_RS04415 PF02566 OsmC-like protein BED33_RS04420 PF00485 Phosphoribulokinase / Uridine kinase family BED33_RS04425 PF06794 Uncharacterised protein family (UPF0270) BED33_RS04430 PF00561 alpha/beta hydrolase fold BED33_RS04435 PF01810 LysE type translocator BED33_RS04440 PF02567 Phenazine biosynthesis-like protein BED33_RS04445 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BED33_RS04455 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS04460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family BED33_RS04470 PF00535 Glycosyl transferase family 2 BED33_RS04475 PF12848 ABC transporter BED33_RS04475 PF00005 ABC transporter BED33_RS04480 PF02525 Flavodoxin-like fold BED33_RS04485 PF00999 Sodium/hydrogen exchanger family BED33_RS04485 PF02254 TrkA-N domain BED33_RS04490 PF09526 Probable metal-binding protein (DUF2387) BED33_RS04495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED33_RS04500 PF04102 SlyX BED33_RS04505 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase BED33_RS04505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED33_RS04510 PF13309 HTH domain BED33_RS04510 PF08348 YheO-like PAS domain BED33_RS04515 PF02635 DsrE/DsrF-like family BED33_RS04520 PF02635 DsrE/DsrF-like family BED33_RS04525 PF04077 DsrH like protein BED33_RS04530 PF00164 Ribosomal protein S12/S23 BED33_RS04535 PF00177 Ribosomal protein S7p/S5e BED33_RS04540 PF03144 Elongation factor Tu domain 2 BED33_RS04540 PF00679 Elongation factor G C-terminus BED33_RS04540 PF14492 Elongation Factor G, domain II BED33_RS04540 PF03764 Elongation factor G, domain IV BED33_RS04540 PF00009 Elongation factor Tu GTP binding domain BED33_RS04545 PF03143 Elongation factor Tu C-terminal domain BED33_RS04545 PF03144 Elongation factor Tu domain 2 BED33_RS04545 PF00009 Elongation factor Tu GTP binding domain BED33_RS04550 PF04324 BFD-like [2Fe-2S] binding domain BED33_RS04555 PF00210 Ferritin-like domain BED33_RS04560 PF00338 Ribosomal protein S10p/S20e BED33_RS04565 PF00297 Ribosomal protein L3 BED33_RS04570 PF00573 Ribosomal protein L4/L1 family BED33_RS04575 PF00276 Ribosomal protein L23 BED33_RS04580 PF00181 Ribosomal Proteins L2, RNA binding domain BED33_RS04580 PF03947 Ribosomal Proteins L2, C-terminal domain BED33_RS04585 PF00203 Ribosomal protein S19 BED33_RS04590 PF00237 Ribosomal protein L22p/L17e BED33_RS04595 PF07650 KH domain BED33_RS04595 PF00189 Ribosomal protein S3, C-terminal domain BED33_RS04600 PF00252 Ribosomal protein L16p/L10e BED33_RS04605 PF00831 Ribosomal L29 protein BED33_RS04610 PF00366 Ribosomal protein S17 BED33_RS04615 PF00238 Ribosomal protein L14p/L23e BED33_RS04620 PF00467 KOW motif BED33_RS04620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BED33_RS04625 PF00673 ribosomal L5P family C-terminus BED33_RS04625 PF00281 Ribosomal protein L5 BED33_RS04630 PF00253 Ribosomal protein S14p/S29e BED33_RS04635 PF00410 Ribosomal protein S8 BED33_RS04640 PF00347 Ribosomal protein L6 BED33_RS04645 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BED33_RS04650 PF03719 Ribosomal protein S5, C-terminal domain BED33_RS04650 PF00333 Ribosomal protein S5, N-terminal domain BED33_RS04655 PF00327 Ribosomal protein L30p/L7e BED33_RS04660 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BED33_RS04665 PF00344 SecY translocase BED33_RS04670 PF00444 Ribosomal protein L36 BED33_RS04675 PF00416 Ribosomal protein S13/S18 BED33_RS04680 PF00411 Ribosomal protein S11 BED33_RS04685 PF01479 S4 domain BED33_RS04685 PF00163 Ribosomal protein S4/S9 N-terminal domain BED33_RS04690 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BED33_RS04690 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BED33_RS04690 PF01000 RNA polymerase Rpb3/RpoA insert domain BED33_RS04695 PF01196 Ribosomal protein L17 BED33_RS04700 PF09350 Domain of unknown function (DUF1992) BED33_RS04705 PF13411 MerR HTH family regulatory protein BED33_RS04710 PF03889 Alternative ribosome-rescue factor A BED33_RS04720 PF01741 Large-conductance mechanosensitive channel, MscL BED33_RS04725 PF02254 TrkA-N domain BED33_RS04725 PF02080 TrkA-C domain BED33_RS04730 PF01029 NusB family BED33_RS04730 PF01189 16S rRNA methyltransferase RsmB/F BED33_RS04735 PF02911 Formyl transferase, C-terminal domain BED33_RS04735 PF00551 Formyl transferase BED33_RS04740 PF01327 Polypeptide deformylase BED33_RS04745 PF02481 DNA recombination-mediator protein A BED33_RS04745 PF17782 DprA winged helix domain BED33_RS04750 PF04361 Protein of unknown function (DUF494) BED33_RS04755 PF01396 Topoisomerase DNA binding C4 zinc finger BED33_RS04760 PF01300 Telomere recombination BED33_RS04765 PF01488 Shikimate / quinate 5-dehydrogenase BED33_RS04765 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BED33_RS04765 PF08501 Shikimate dehydrogenase substrate binding domain BED33_RS04770 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS04800 PF01548 Transposase BED33_RS04800 PF02371 Transposase IS116/IS110/IS902 family BED33_RS04805 PF04204 Homoserine O-succinyltransferase BED33_RS04810 PF01274 Malate synthase BED33_RS04815 PF00463 Isocitrate lyase family BED33_RS04820 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) BED33_RS04825 PF09339 IclR helix-turn-helix domain BED33_RS04825 PF01614 Bacterial transcriptional regulator BED33_RS04830 PF02607 B12 binding domain BED33_RS04830 PF02574 Homocysteine S-methyltransferase BED33_RS04830 PF02965 Vitamin B12 dependent methionine synthase, activation domain BED33_RS04830 PF02310 B12 binding domain BED33_RS04830 PF00809 Pterin binding enzyme BED33_RS04835 PF13332 Hemagglutinin repeat BED33_RS04835 PF05860 haemagglutination activity domain BED33_RS04840 PF08479 POTRA domain, ShlB-type BED33_RS04840 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BED33_RS04840 PF17287 POTRA domain BED33_RS04845 PF01758 Sodium Bile acid symporter family BED33_RS04850 PF00696 Amino acid kinase family BED33_RS04850 PF01842 ACT domain BED33_RS04855 PF00342 Phosphoglucose isomerase BED33_RS04860 PF06146 Phosphate-starvation-inducible E BED33_RS04865 PF01548 Transposase BED33_RS04865 PF02371 Transposase IS116/IS110/IS902 family BED33_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS04880 PF01547 Bacterial extracellular solute-binding protein BED33_RS04885 PF17912 MalK OB fold domain BED33_RS04885 PF00005 ABC transporter BED33_RS04890 PF02264 LamB porin BED33_RS04895 PF07148 Maltose operon periplasmic protein precursor (MalM) BED33_RS04905 PF04345 Chorismate lyase BED33_RS04910 PF01040 UbiA prenyltransferase family BED33_RS04915 PF01553 Acyltransferase BED33_RS04920 PF01219 Prokaryotic diacylglycerol kinase BED33_RS04925 PF01726 LexA DNA binding domain BED33_RS04925 PF00717 Peptidase S24-like BED33_RS04930 PF05532 CsbD-like BED33_RS04935 PF01475 Ferric uptake regulator family BED33_RS04940 PF01757 Acyltransferase family BED33_RS04945 PF01207 Dihydrouridine synthase (Dus) BED33_RS04950 PF09583 Phage shock protein G (Phageshock_PspG) BED33_RS04960 PF00107 Zinc-binding dehydrogenase BED33_RS04960 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS04965 PF00772 DnaB-like helicase N terminal domain BED33_RS04965 PF03796 DnaB-like helicase C terminal domain BED33_RS04975 PF00155 Aminotransferase class I and II BED33_RS04980 PF04237 YjbR BED33_RS04985 PF17760 UvrA interaction domain BED33_RS04985 PF00005 ABC transporter BED33_RS04985 PF17755 UvrA DNA-binding domain BED33_RS04990 PF00436 Single-strand binding protein family BED33_RS04995 PF13657 HipA N-terminal domain BED33_RS04995 PF07804 HipA-like C-terminal domain BED33_RS05010 PF00860 Permease family BED33_RS05015 PF00999 Sodium/hydrogen exchanger family BED33_RS05020 PF03466 LysR substrate binding domain BED33_RS05020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS05025 PF03788 LrgA family BED33_RS05035 PF00005 ABC transporter BED33_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS05050 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS05060 PF01548 Transposase BED33_RS05060 PF02371 Transposase IS116/IS110/IS902 family BED33_RS05065 PF03279 Bacterial lipid A biosynthesis acyltransferase BED33_RS05070 PF00939 Sodium:sulfate symporter transmembrane region BED33_RS05075 PF00313 'Cold-shock' DNA-binding domain BED33_RS05080 PF00313 'Cold-shock' DNA-binding domain BED33_RS05085 PF05433 Glycine zipper 2TM domain BED33_RS05095 PF02954 Bacterial regulatory protein, Fis family BED33_RS05100 PF01207 Dihydrouridine synthase (Dus) BED33_RS05110 PF00474 Sodium:solute symporter family BED33_RS05115 PF06196 Protein of unknown function (DUF997) BED33_RS05120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BED33_RS05120 PF02785 Biotin carboxylase C-terminal domain BED33_RS05120 PF00289 Biotin carboxylase, N-terminal domain BED33_RS05125 PF00364 Biotin-requiring enzyme BED33_RS05130 PF01220 Dehydroquinase class II BED33_RS05135 PF01794 Ferric reductase like transmembrane component BED33_RS05140 PF00174 Oxidoreductase molybdopterin binding domain BED33_RS05145 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS05145 PF00107 Zinc-binding dehydrogenase BED33_RS05150 PF00563 EAL domain BED33_RS05150 PF17157 Gammaproteobacterial periplasmic sensor domain BED33_RS05150 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS05160 PF04085 rod shape-determining protein MreC BED33_RS05165 PF04093 rod shape-determining protein MreD BED33_RS05170 PF02545 Maf-like protein BED33_RS05175 PF10150 Ribonuclease E/G family BED33_RS05175 PF00575 S1 RNA binding domain BED33_RS05180 PF13502 AsmA-like C-terminal region BED33_RS05180 PF13116 Protein of unknown function BED33_RS05185 PF00795 Carbon-nitrogen hydrolase BED33_RS05190 PF01523 Putative modulator of DNA gyrase BED33_RS05205 PF05785 Rho-activating domain of cytotoxic necrotizing factor BED33_RS05205 PF18807 Tripartite Tc toxins repeat BED33_RS05225 PF03534 Salmonella virulence plasmid 65kDa B protein BED33_RS05225 PF12256 Insecticide toxin TcdB middle/N-terminal region BED33_RS05225 PF12255 Insecticide toxin TcdB middle/C-terminal region BED33_RS05230 PF18276 Tc toxin complex TcA C-terminal TcB-binding domain BED33_RS05230 PF18413 Neuraminidase-like domain BED33_RS05245 PF03466 LysR substrate binding domain BED33_RS05245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS05250 PF07869 Protein of unknown function (DUF1656) BED33_RS05255 PF13533 Biotin-lipoyl like BED33_RS05260 PF04632 Fusaric acid resistance protein family BED33_RS05265 PF00171 Aldehyde dehydrogenase family BED33_RS05275 PF01337 Barstar (barnase inhibitor) BED33_RS05280 PF04751 Protein of unknown function (DUF615) BED33_RS05285 PF00589 Phage integrase family BED33_RS05285 PF02899 Phage integrase, N-terminal SAM-like domain BED33_RS05315 PF02086 D12 class N6 adenine-specific DNA methyltransferase BED33_RS05325 PF05840 Bacteriophage replication gene A protein (GPA) BED33_RS05425 PF03335 Phage tail fibre repeat BED33_RS05425 PF08400 Prophage tail fibre N-terminal BED33_RS05425 PF07484 Phage Tail Collar Domain BED33_RS05460 PF01523 Putative modulator of DNA gyrase BED33_RS05465 PF01548 Transposase BED33_RS05465 PF02371 Transposase IS116/IS110/IS902 family BED33_RS05470 PF07361 Cytochrome b562 BED33_RS05475 PF01272 Transcription elongation factor, GreA/GreB, C-term BED33_RS05475 PF14760 Rnk N-terminus BED33_RS05505 PF01979 Amidohydrolase family BED33_RS05510 PF03841 L-seryl-tRNA selenium transferase BED33_RS05515 PF07071 KDGP aldolase BED33_RS05525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED33_RS05525 PF08279 HTH domain BED33_RS05525 PF05043 Mga helix-turn-helix domain BED33_RS05525 PF00874 PRD domain BED33_RS05530 PF01381 Helix-turn-helix BED33_RS05535 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB BED33_RS05545 PF00356 Bacterial regulatory proteins, lacI family BED33_RS05555 PF00128 Alpha amylase, catalytic domain BED33_RS05555 PF11941 Domain of unknown function (DUF3459) BED33_RS05570 PF04168 A predicted alpha-helical domain with a conserved ER motif. BED33_RS05570 PF14403 Circularly permuted ATP-grasp type 2 BED33_RS05575 PF14403 Circularly permuted ATP-grasp type 2 BED33_RS05580 PF01042 Endoribonuclease L-PSP BED33_RS05585 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain BED33_RS05585 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain BED33_RS05590 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BED33_RS05590 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BED33_RS05595 PF00381 PTS HPr component phosphorylation site BED33_RS05600 PF03668 P-loop ATPase protein family BED33_RS05605 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED33_RS05610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BED33_RS05615 PF04963 Sigma-54 factor, core binding domain BED33_RS05615 PF04552 Sigma-54, DNA binding domain BED33_RS05615 PF00309 Sigma-54 factor, Activator interacting domain (AID) BED33_RS05620 PF00005 ABC transporter BED33_RS05620 PF12399 Branched-chain amino acid ATP-binding cassette transporter BED33_RS05625 PF03968 OstA-like protein BED33_RS05630 PF06835 Lipopolysaccharide-assembly, LptC-related BED33_RS05640 PF01380 SIS domain BED33_RS05640 PF00571 CBS domain BED33_RS05650 PF00005 ABC transporter BED33_RS05655 PF02405 Permease MlaE BED33_RS05660 PF02470 MlaD protein BED33_RS05665 PF05494 MlaC protein BED33_RS05670 PF13466 STAS domain BED33_RS05675 PF01722 BolA-like protein BED33_RS05680 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BED33_RS05685 PF13180 PDZ domain BED33_RS05690 PF13180 PDZ domain BED33_RS05690 PF00595 PDZ domain BED33_RS05695 PF06295 Protein of unknown function (DUF1043) BED33_RS05700 PF03969 AFG1-like ATPase BED33_RS05705 PF00572 Ribosomal protein L13 BED33_RS05710 PF00380 Ribosomal protein S9/S16 BED33_RS05715 PF02798 Glutathione S-transferase, N-terminal domain BED33_RS05715 PF00043 Glutathione S-transferase, C-terminal domain BED33_RS05720 PF04386 Stringent starvation protein B BED33_RS05735 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS05735 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BED33_RS05740 PF00310 Glutamine amidotransferases class-II BED33_RS05740 PF01493 GXGXG motif BED33_RS05740 PF01645 Conserved region in glutamate synthase BED33_RS05740 PF04898 Glutamate synthase central domain BED33_RS05745 PF16199 Radical_SAM C-terminal domain BED33_RS05745 PF04055 Radical SAM superfamily BED33_RS05750 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS05750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS05750 PF18415 Histidine kinase receptor ArcB trans-membrane domain BED33_RS05750 PF01627 Hpt domain BED33_RS05750 PF00989 PAS fold BED33_RS05750 PF00072 Response regulator receiver domain BED33_RS05760 PF00912 Transglycosylase BED33_RS05765 PF04972 BON domain BED33_RS05770 PF13580 SIS domain BED33_RS05775 PF02021 Uncharacterised protein family UPF0102 BED33_RS05780 PF04348 LppC putative lipoprotein BED33_RS05785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS05805 PF00239 Resolvase, N terminal domain BED33_RS05805 PF02796 Helix-turn-helix domain of resolvase BED33_RS05815 PF00145 C-5 cytosine-specific DNA methylase BED33_RS05825 PF01381 Helix-turn-helix BED33_RS05840 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS05840 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS05845 PF13954 PapC N-terminal domain BED33_RS05845 PF13953 PapC C-terminal domain BED33_RS05845 PF00577 Outer membrane usher protein BED33_RS05855 PF03466 LysR substrate binding domain BED33_RS05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS05860 PF00248 Aldo/keto reductase family BED33_RS05865 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS05865 PF00107 Zinc-binding dehydrogenase BED33_RS05870 PF02678 Pirin BED33_RS05870 PF17954 Quercetinase C-terminal cupin domain BED33_RS05875 PF03466 LysR substrate binding domain BED33_RS05875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS05880 PF13409 Glutathione S-transferase, N-terminal domain BED33_RS05885 PF07681 DoxX BED33_RS05890 PF13997 YqjK-like protein BED33_RS05895 PF07332 Putative Actinobacterial Holin-X, holin superfamily III BED33_RS05900 PF05957 Bacterial protein of unknown function (DUF883) BED33_RS05910 PF13721 SecD export protein N-terminal TM region BED33_RS05915 PF09335 SNARE associated Golgi protein BED33_RS05925 PF07729 FCD domain BED33_RS05925 PF00392 Bacterial regulatory proteins, gntR family BED33_RS05930 PF07690 Major Facilitator Superfamily BED33_RS05935 PF02614 Glucuronate isomerase BED33_RS05940 PF08125 Mannitol dehydrogenase C-terminal domain BED33_RS05940 PF01232 Mannitol dehydrogenase Rossmann domain BED33_RS05945 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BED33_RS05945 PF08666 SAF domain BED33_RS05950 PF10688 Bacterial inner membrane protein BED33_RS05955 PF00375 Sodium:dicarboxylate symporter family BED33_RS05960 PF03741 Integral membrane protein TerC family BED33_RS05970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED33_RS05975 PF01863 Protein of unknown function DUF45 BED33_RS05990 PF03797 Autotransporter beta-domain BED33_RS05995 PF05175 Methyltransferase small domain BED33_RS06000 PF02371 Transposase IS116/IS110/IS902 family BED33_RS06000 PF01548 Transposase BED33_RS06005 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS06005 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BED33_RS06010 PF00892 EamA-like transporter family BED33_RS06015 PF03729 Short repeat of unknown function (DUF308) BED33_RS06025 PF00282 Pyridoxal-dependent decarboxylase conserved domain BED33_RS06030 PF13520 Amino acid permease BED33_RS06035 PF04960 Glutaminase BED33_RS06040 PF02378 Phosphotransferase system, EIIC BED33_RS06040 PF00367 phosphotransferase system, EIIB BED33_RS06045 PF00872 Transposase, Mutator family BED33_RS06050 PF00367 phosphotransferase system, EIIB BED33_RS06050 PF02378 Phosphotransferase system, EIIC BED33_RS06055 PF13580 SIS domain BED33_RS06060 PF01418 Helix-turn-helix domain, rpiR family BED33_RS06060 PF01380 SIS domain BED33_RS06065 PF01915 Glycosyl hydrolase family 3 C-terminal domain BED33_RS06065 PF00933 Glycosyl hydrolase family 3 N terminal domain BED33_RS06075 PF07075 Protein of unknown function (DUF1343) BED33_RS06085 PF02371 Transposase IS116/IS110/IS902 family BED33_RS06085 PF01548 Transposase BED33_RS06090 PF04539 Sigma-70 region 3 BED33_RS06090 PF00140 Sigma-70 factor, region 1.2 BED33_RS06090 PF03979 Sigma-70 factor, region 1.1 BED33_RS06090 PF04546 Sigma-70, non-essential region BED33_RS06090 PF04545 Sigma-70, region 4 BED33_RS06090 PF04542 Sigma-70 region 2 BED33_RS06095 PF08278 DNA primase DnaG DnaB-binding BED33_RS06095 PF10410 DnaB-helicase binding domain of primase BED33_RS06095 PF01807 CHC2 zinc finger BED33_RS06095 PF08275 DNA primase catalytic core, N-terminal domain BED33_RS06100 PF01165 Ribosomal protein S21 BED33_RS06105 PF00814 Glycoprotease family BED33_RS06110 PF02660 Glycerol-3-phosphate acyltransferase BED33_RS06115 PF02152 Dihydroneopterin aldolase BED33_RS06120 PF02673 Bacitracin resistance protein BacA BED33_RS06125 PF01743 Poly A polymerase head domain BED33_RS06125 PF01966 HD domain BED33_RS06125 PF12627 Probable RNA and SrmB- binding site of polymerase A BED33_RS06130 PF08239 Bacterial SH3 domain BED33_RS06135 PF01928 CYTH domain BED33_RS06140 PF03710 Glutamate-ammonia ligase adenylyltransferase BED33_RS06140 PF08335 GlnD PII-uridylyltransferase BED33_RS06145 PF00294 pfkB family carbohydrate kinase BED33_RS06145 PF01467 Cytidylyltransferase-like BED33_RS06150 PF13520 Amino acid permease BED33_RS06155 PF04380 Membrane fusogenic activity BED33_RS06160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BED33_RS06165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase BED33_RS06170 PF03738 Glutathionylspermidine synthase preATP-grasp BED33_RS06175 PF06693 Protein of unknown function (DUF1190) BED33_RS06185 PF02321 Outer membrane efflux protein BED33_RS06190 PF00293 NUDIX domain BED33_RS06195 PF06853 Protein of unknown function (DUF1249) BED33_RS06200 PF00149 Calcineurin-like phosphoesterase BED33_RS06205 PF05728 Uncharacterised protein family (UPF0227) BED33_RS06210 PF00986 DNA gyrase B subunit, carboxyl terminus BED33_RS06210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS06210 PF01751 Toprim domain BED33_RS06210 PF00204 DNA gyrase B BED33_RS06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS06215 PF03466 LysR substrate binding domain BED33_RS06220 PF03992 Antibiotic biosynthesis monooxygenase BED33_RS06225 PF02525 Flavodoxin-like fold BED33_RS06230 PF00521 DNA gyrase/topoisomerase IV, subunit A BED33_RS06230 PF03989 DNA gyrase C-terminal domain, beta-propeller BED33_RS06235 PF01553 Acyltransferase BED33_RS06240 PF07731 Multicopper oxidase BED33_RS06240 PF07732 Multicopper oxidase BED33_RS06245 PF11842 Domain of unknown function (DUF3362) BED33_RS06245 PF04055 Radical SAM superfamily BED33_RS06245 PF08497 Radical SAM N-terminal BED33_RS06250 PF00248 Aldo/keto reductase family BED33_RS06255 PF00465 Iron-containing alcohol dehydrogenase BED33_RS06260 PF12833 Helix-turn-helix domain BED33_RS06260 PF06719 AraC-type transcriptional regulator N-terminus BED33_RS06265 PF09335 SNARE associated Golgi protein BED33_RS06270 PF01053 Cys/Met metabolism PLP-dependent enzyme BED33_RS06275 PF01618 MotA/TolQ/ExbB proton channel family BED33_RS06280 PF02472 Biopolymer transport protein ExbD/TolR BED33_RS06315 PF00437 Type II/IV secretion system protein BED33_RS06330 PF04972 BON domain BED33_RS06330 PF13629 Pilus formation protein N terminal region BED33_RS06330 PF00263 Bacterial type II and III secretion system protein BED33_RS06355 PF13532 2OG-Fe(II) oxygenase superfamily BED33_RS06360 PF00873 AcrB/AcrD/AcrF family BED33_RS06370 PF02586 SOS response associated peptidase (SRAP) BED33_RS06385 PF12833 Helix-turn-helix domain BED33_RS06390 PF01527 Transposase BED33_RS06410 PF12704 MacB-like periplasmic core domain BED33_RS06410 PF00005 ABC transporter BED33_RS06410 PF02687 FtsX-like permease family BED33_RS06415 PF12833 Helix-turn-helix domain BED33_RS06425 PF13276 HTH-like domain BED33_RS06425 PF13333 Integrase core domain BED33_RS06425 PF00665 Integrase core domain BED33_RS06440 PF00756 Putative esterase BED33_RS06440 PF11806 Domain of unknown function (DUF3327) BED33_RS06445 PF00005 ABC transporter BED33_RS06450 PF01032 FecCD transport family BED33_RS06455 PF01032 FecCD transport family BED33_RS06460 PF01497 Periplasmic binding protein BED33_RS06470 PF01370 NAD dependent epimerase/dehydratase family BED33_RS06475 PF00672 HAMP domain BED33_RS06475 PF02203 Tar ligand binding domain homologue BED33_RS06475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS06485 PF00771 FHIPEP family BED33_RS06490 PF01312 FlhB HrpN YscU SpaS Family BED33_RS06495 PF01311 Bacterial export proteins, family 1 BED33_RS06500 PF01313 Bacterial export proteins, family 3 BED33_RS06505 PF00813 FliP family BED33_RS06510 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BED33_RS06520 PF00158 Sigma-54 interaction domain BED33_RS06520 PF00072 Response regulator receiver domain BED33_RS06520 PF02954 Bacterial regulatory protein, Fis family BED33_RS06525 PF02049 Flagellar hook-basal body complex protein FliE BED33_RS06545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED33_RS06545 PF18269 T3SS EscN ATPase C-terminal domain BED33_RS06570 PF00460 Flagella basal body rod protein BED33_RS06575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS06575 PF00460 Flagella basal body rod protein BED33_RS06580 PF13861 FlgD Tudor-like domain BED33_RS06580 PF03963 Flagellar hook capping protein - N-terminal region BED33_RS06580 PF13860 FlgD Ig-like domain BED33_RS06585 PF00460 Flagella basal body rod protein BED33_RS06585 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS06585 PF07559 Flagellar basal body protein FlaE BED33_RS06590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS06590 PF00460 Flagella basal body rod protein BED33_RS06595 PF00460 Flagella basal body rod protein BED33_RS06595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS06600 PF02107 Flagellar L-ring protein BED33_RS06605 PF02119 Flagellar P-ring protein BED33_RS06640 PF00669 Bacterial flagellin N-terminal helical region BED33_RS06640 PF00700 Bacterial flagellin C-terminal helical region BED33_RS06645 PF07195 Flagellar hook-associated protein 2 C-terminus BED33_RS06645 PF07196 Flagellin hook IN motif BED33_RS06645 PF02465 Flagellar hook-associated protein 2 N-terminus BED33_RS06650 PF02561 Flagellar protein FliS BED33_RS06670 PF04542 Sigma-70 region 2 BED33_RS06670 PF04545 Sigma-70, region 4 BED33_RS06675 PF01618 MotA/TolQ/ExbB proton channel family BED33_RS06680 PF00691 OmpA family BED33_RS06680 PF13677 Membrane MotB of proton-channel complex MotA/MotB BED33_RS06685 PF05433 Glycine zipper 2TM domain BED33_RS06690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BED33_RS06690 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal BED33_RS06695 PF13247 4Fe-4S dicluster domain BED33_RS06700 PF03916 Polysulphide reductase, NrfD BED33_RS06705 PF00374 Nickel-dependent hydrogenase BED33_RS06710 PF01750 Hydrogenase maturation protease BED33_RS06715 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE BED33_RS06720 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BED33_RS06725 PF02492 CobW/HypB/UreG, nucleotide-binding domain BED33_RS06730 PF01455 HupF/HypC family BED33_RS06735 PF01924 Hydrogenase formation hypA family BED33_RS06740 PF00586 AIR synthase related protein, N-terminal domain BED33_RS06740 PF02769 AIR synthase related protein, C-terminal domain BED33_RS06745 PF07503 HypF finger BED33_RS06745 PF01300 Telomere recombination BED33_RS06745 PF17788 HypF Kae1-like domain BED33_RS06745 PF00708 Acylphosphatase BED33_RS06750 PF13784 Fic/DOC family N-terminal BED33_RS06750 PF02661 Fic/DOC family BED33_RS06755 PF02110 Hydroxyethylthiazole kinase family BED33_RS06770 PF08447 PAS fold BED33_RS06770 PF08448 PAS fold BED33_RS06770 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS06770 PF00563 EAL domain BED33_RS06775 PF13533 Biotin-lipoyl like BED33_RS06790 PF00083 Sugar (and other) transporter BED33_RS06790 PF08946 Osmosensory transporter coiled coil BED33_RS06805 PF02690 Na+/Pi-cotransporter BED33_RS06810 PF01156 Inosine-uridine preferring nucleoside hydrolase BED33_RS06815 PF00356 Bacterial regulatory proteins, lacI family BED33_RS06820 PF02371 Transposase IS116/IS110/IS902 family BED33_RS06820 PF01548 Transposase BED33_RS06825 PF00083 Sugar (and other) transporter BED33_RS06825 PF07690 Major Facilitator Superfamily BED33_RS06830 PF00155 Aminotransferase class I and II BED33_RS06830 PF00392 Bacterial regulatory proteins, gntR family BED33_RS06850 PF01497 Periplasmic binding protein BED33_RS06855 PF01032 FecCD transport family BED33_RS06860 PF01032 FecCD transport family BED33_RS06865 PF00005 ABC transporter BED33_RS06870 PF00557 Metallopeptidase family M24 BED33_RS06890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS06890 PF00529 HlyD membrane-fusion protein of T1SS BED33_RS06895 PF04632 Fusaric acid resistance protein family BED33_RS06905 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED33_RS06905 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED33_RS06905 PF01276 Orn/Lys/Arg decarboxylase, major domain BED33_RS06910 PF13520 Amino acid permease BED33_RS06925 PF03400 IS1 transposase BED33_RS06930 PF03811 InsA N-terminal domain BED33_RS06930 PF12759 InsA C-terminal domain BED33_RS06950 PF00589 Phage integrase family BED33_RS06965 PF01276 Orn/Lys/Arg decarboxylase, major domain BED33_RS06965 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED33_RS06965 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED33_RS06975 PF01464 Transglycosylase SLT domain BED33_RS06975 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain BED33_RS06980 PF04362 Bacterial Fe(2+) trafficking BED33_RS06985 PF14815 NUDIX domain BED33_RS06985 PF00633 Helix-hairpin-helix motif BED33_RS06985 PF10576 Iron-sulfur binding domain of endonuclease III BED33_RS06985 PF00730 HhH-GPD superfamily base excision DNA repair protein BED33_RS06990 PF02390 Putative methyltransferase BED33_RS06995 PF04320 Protein with unknown function (DUF469) BED33_RS07000 PF04960 Glutaminase BED33_RS07005 PF11101 Protein of unknown function (DUF2884) BED33_RS07010 PF06969 HemN C-terminal domain BED33_RS07010 PF04055 Radical SAM superfamily BED33_RS07015 PF01725 Ham1 family BED33_RS07020 PF02594 Uncharacterised ACR, YggU family COG1872 BED33_RS07025 PF02325 YGGT family BED33_RS07030 PF14748 Pyrroline-5-carboxylate reductase dimerisation BED33_RS07030 PF03807 NADP oxidoreductase coenzyme F420-dependent BED33_RS07035 PF01168 Alanine racemase, N-terminal domain BED33_RS07040 PF00437 Type II/IV secretion system protein BED33_RS07045 PF04371 Porphyromonas-type peptidyl-arginine deiminase BED33_RS07050 PF00795 Carbon-nitrogen hydrolase BED33_RS07055 PF03652 Holliday junction resolvase BED33_RS07060 PF02622 Uncharacterized ACR, COG1678 BED33_RS07065 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain BED33_RS07065 PF02951 Prokaryotic glutathione synthetase, N-terminal domain BED33_RS07070 PF04452 RNA methyltransferase BED33_RS07075 PF04231 Endonuclease I BED33_RS07080 PF17283 SprT-like zinc ribbon domain BED33_RS07080 PF10263 SprT-like family BED33_RS07090 PF00872 Transposase, Mutator family BED33_RS07095 PF04143 Sulphur transport BED33_RS07105 PF02773 S-adenosylmethionine synthetase, C-terminal domain BED33_RS07105 PF00438 S-adenosylmethionine synthetase, N-terminal domain BED33_RS07105 PF02772 S-adenosylmethionine synthetase, central domain BED33_RS07110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BED33_RS07110 PF17810 Arginine decarboxylase helical bundle domain BED33_RS07110 PF17944 Arginine decarboxylase C-terminal helical extension BED33_RS07115 PF00355 Rieske [2Fe-2S] domain BED33_RS07120 PF01435 Peptidase family M48 BED33_RS07125 PF02780 Transketolase, C-terminal domain BED33_RS07125 PF02779 Transketolase, pyrimidine binding domain BED33_RS07125 PF00456 Transketolase, thiamine diphosphate binding domain BED33_RS07130 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BED33_RS07130 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED33_RS07135 PF00162 Phosphoglycerate kinase BED33_RS07140 PF01116 Fructose-bisphosphate aldolase class-II BED33_RS07145 PF00102 Protein-tyrosine phosphatase BED33_RS07145 PF09013 YopH, N-terminal BED33_RS07150 PF05552 Conserved TM helix BED33_RS07150 PF00924 Mechanosensitive ion channel BED33_RS07155 PF01548 Transposase BED33_RS07155 PF02371 Transposase IS116/IS110/IS902 family BED33_RS07160 PF01810 LysE type translocator BED33_RS07165 PF04402 Protein of unknown function (DUF541) BED33_RS07170 PF03466 LysR substrate binding domain BED33_RS07170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS07175 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BED33_RS07180 PF01842 ACT domain BED33_RS07180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED33_RS07180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_RS07210 PF00080 Copper/zinc superoxide dismutase (SODC) BED33_RS07215 PF04055 Radical SAM superfamily BED33_RS07235 PF01242 6-pyruvoyl tetrahydropterin synthase BED33_RS07240 PF00667 FAD binding domain BED33_RS07240 PF00175 Oxidoreductase NAD-binding domain BED33_RS07240 PF00258 Flavodoxin BED33_RS07245 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BED33_RS07245 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BED33_RS07250 PF01507 Phosphoadenosine phosphosulfate reductase family BED33_RS07265 PF04389 Peptidase family M28 BED33_RS07270 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS07270 PF14824 Sirohaem biosynthesis protein central BED33_RS07270 PF10414 Sirohaem synthase dimerisation region BED33_RS07275 PF01507 Phosphoadenosine phosphosulfate reductase family BED33_RS07280 PF00009 Elongation factor Tu GTP binding domain BED33_RS07290 PF12084 Protein of unknown function (DUF3561) BED33_RS07295 PF04977 Septum formation initiator BED33_RS07300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BED33_RS07305 PF02542 YgbB family BED33_RS07310 PF01142 tRNA pseudouridine synthase D (TruD) BED33_RS07315 PF01975 Survival protein SurE BED33_RS07325 PF01476 LysM domain BED33_RS07325 PF01551 Peptidase family M23 BED33_RS07330 PF00140 Sigma-70 factor, region 1.2 BED33_RS07330 PF04539 Sigma-70 region 3 BED33_RS07330 PF04542 Sigma-70 region 2 BED33_RS07330 PF04545 Sigma-70, region 4 BED33_RS07335 PF00488 MutS domain V BED33_RS07335 PF05190 MutS family domain IV BED33_RS07335 PF01624 MutS domain I BED33_RS07335 PF05192 MutS domain III BED33_RS07335 PF05188 MutS domain II BED33_RS07350 PF00419 Fimbrial protein BED33_RS07355 PF00419 Fimbrial protein BED33_RS07360 PF13954 PapC N-terminal domain BED33_RS07360 PF00577 Outer membrane usher protein BED33_RS07360 PF13953 PapC C-terminal domain BED33_RS07365 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS07365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS07375 PF00419 Fimbrial protein BED33_RS07380 PF00419 Fimbrial protein BED33_RS07405 PF03412 Peptidase C39 family BED33_RS07405 PF00664 ABC transporter transmembrane region BED33_RS07405 PF00005 ABC transporter BED33_RS07410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS07415 PF02687 FtsX-like permease family BED33_RS07415 PF00005 ABC transporter BED33_RS07415 PF12704 MacB-like periplasmic core domain BED33_RS07420 PF02321 Outer membrane efflux protein BED33_RS07425 PF00109 Beta-ketoacyl synthase, N-terminal domain BED33_RS07425 PF02801 Beta-ketoacyl synthase, C-terminal domain BED33_RS07445 PF00155 Aminotransferase class I and II BED33_RS07450 PF14376 Haem-binding domain BED33_RS07450 PF03150 Di-haem cytochrome c peroxidase BED33_RS07450 PF00034 Cytochrome c BED33_RS07460 PF03144 Elongation factor Tu domain 2 BED33_RS07460 PF03764 Elongation factor G, domain IV BED33_RS07460 PF14492 Elongation Factor G, domain II BED33_RS07460 PF00009 Elongation factor Tu GTP binding domain BED33_RS07460 PF00679 Elongation factor G C-terminus BED33_RS07465 PF01022 Bacterial regulatory protein, arsR family BED33_RS07470 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS07470 PF00107 Zinc-binding dehydrogenase BED33_RS07475 PF03613 PTS system mannose/fructose/sorbose family IID component BED33_RS07480 PF03609 PTS system sorbose-specific iic component BED33_RS07490 PF03610 PTS system fructose IIA component BED33_RS07495 PF13936 Helix-turn-helix domain BED33_RS07495 PF04198 Putative sugar-binding domain BED33_RS07500 PF00795 Carbon-nitrogen hydrolase BED33_RS07520 PF00005 ABC transporter BED33_RS07525 PF00005 ABC transporter BED33_RS07530 PF02653 Branched-chain amino acid transport system / permease component BED33_RS07530 PF11862 Domain of unknown function (DUF3382) BED33_RS07535 PF02653 Branched-chain amino acid transport system / permease component BED33_RS07540 PF13458 Periplasmic binding protein BED33_RS07545 PF05681 Fumarate hydratase (Fumerase) BED33_RS07545 PF05683 Fumarase C-terminus BED33_RS07550 PF00384 Molybdopterin oxidoreductase BED33_RS07550 PF01568 Molydopterin dinucleotide binding domain BED33_RS07550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS07555 PF12800 4Fe-4S binding domain BED33_RS07555 PF13247 4Fe-4S dicluster domain BED33_RS07560 PF04976 DMSO reductase anchor subunit (DmsC) BED33_RS07565 PF02613 Nitrate reductase delta subunit BED33_RS07570 PF02371 Transposase IS116/IS110/IS902 family BED33_RS07570 PF01548 Transposase BED33_RS07575 PF07690 Major Facilitator Superfamily BED33_RS07580 PF02464 Competence-damaged protein BED33_RS07585 PF00154 recA bacterial DNA recombination protein BED33_RS07590 PF02631 RecX family BED33_RS07595 PF01411 tRNA synthetases class II (A) BED33_RS07595 PF02272 DHHA1 domain BED33_RS07595 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BED33_RS07600 PF02599 Global regulator protein family BED33_RS07620 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS07625 PF09335 SNARE associated Golgi protein BED33_RS07630 PF04262 Glutamate-cysteine ligase BED33_RS07635 PF02664 S-Ribosylhomocysteinase (LuxS) BED33_RS07640 PF00571 CBS domain BED33_RS07640 PF03471 Transporter associated domain BED33_RS07640 PF01595 Cyclin M transmembrane N-terminal domain BED33_RS07645 PF02371 Transposase IS116/IS110/IS902 family BED33_RS07645 PF01548 Transposase BED33_RS07655 PF01578 Cytochrome C assembly protein BED33_RS07660 PF02978 Signal peptide binding domain BED33_RS07660 PF02881 SRP54-type protein, helical bundle domain BED33_RS07660 PF00448 SRP54-type protein, GTPase domain BED33_RS07665 PF00886 Ribosomal protein S16 BED33_RS07670 PF05239 PRC-barrel domain BED33_RS07670 PF01782 RimM N-terminal domain BED33_RS07675 PF01746 tRNA (Guanine-1)-methyltransferase BED33_RS07680 PF01245 Ribosomal protein L19 BED33_RS07690 PF03605 Anaerobic c4-dicarboxylate membrane transporter BED33_RS07695 PF04397 LytTr DNA-binding domain BED33_RS07695 PF00072 Response regulator receiver domain BED33_RS07700 PF00793 DAHP synthetase I family BED33_RS07705 PF02153 Prephenate dehydrogenase BED33_RS07705 PF01817 Chorismate mutase type II BED33_RS07710 PF01817 Chorismate mutase type II BED33_RS07710 PF00800 Prephenate dehydratase BED33_RS07715 PF02371 Transposase IS116/IS110/IS902 family BED33_RS07715 PF01548 Transposase BED33_RS07720 PF10431 C-terminal, D2-small domain, of ClpB protein BED33_RS07720 PF02861 Clp amino terminal domain, pathogenicity island component BED33_RS07720 PF17871 AAA lid domain BED33_RS07720 PF07724 AAA domain (Cdc48 subfamily) BED33_RS07720 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS07725 PF02578 Multi-copper polyphenol oxidoreductase laccase BED33_RS07730 PF01479 S4 domain BED33_RS07730 PF00849 RNA pseudouridylate synthase BED33_RS07735 PF13525 Outer membrane lipoprotein BED33_RS07745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BED33_RS07750 PF00872 Transposase, Mutator family BED33_RS07755 PF01548 Transposase BED33_RS07755 PF02371 Transposase IS116/IS110/IS902 family BED33_RS07785 PF10043 Predicted periplasmic lipoprotein (DUF2279) BED33_RS07790 PF13091 PLD-like domain BED33_RS07795 PF00583 Acetyltransferase (GNAT) family BED33_RS07795 PF13380 CoA binding domain BED33_RS07795 PF13607 Succinyl-CoA ligase like flavodoxin domain BED33_RS07800 PF03942 DTW domain BED33_RS07805 PF00085 Thioredoxin BED33_RS07810 PF00588 SpoU rRNA Methylase family BED33_RS07810 PF08032 RNA 2'-O ribose methyltransferase substrate binding BED33_RS07815 PF07690 Major Facilitator Superfamily BED33_RS07820 PF00529 HlyD membrane-fusion protein of T1SS BED33_RS07820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS07825 PF02321 Outer membrane efflux protein BED33_RS07830 PF01047 MarR family BED33_RS07835 PF05437 Branched-chain amino acid transport protein (AzlD) BED33_RS07840 PF03591 AzlC protein BED33_RS07845 PF07690 Major Facilitator Superfamily BED33_RS07860 PF01425 Amidase BED33_RS07875 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS07880 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS07885 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS07890 PF00005 ABC transporter BED33_RS07895 PF00266 Aminotransferase class-V BED33_RS07900 PF07687 Peptidase dimerisation domain BED33_RS07900 PF01546 Peptidase family M20/M25/M40 BED33_RS07905 PF00795 Carbon-nitrogen hydrolase BED33_RS07910 PF00155 Aminotransferase class I and II BED33_RS07915 PF00589 Phage integrase family BED33_RS07915 PF12167 Arm DNA-binding domain BED33_RS07925 PF05063 MT-A70 BED33_RS07970 PF06630 Enterobacterial exodeoxyribonuclease VIII BED33_RS07970 PF12684 PDDEXK-like domain of unknown function (DUF3799) BED33_RS08050 PF01695 IstB-like ATP binding protein BED33_RS08085 PF07102 Protein of unknown function (DUF1364) BED33_RS08090 PF05866 Endodeoxyribonuclease RusA BED33_RS08120 PF03245 Bacteriophage Rz lysis protein BED33_RS08285 PF00596 Class II Aldolase and Adducin N-terminal domain BED33_RS08295 PF03079 ARD/ARD' family BED33_RS08300 PF01008 Initiation factor 2 subunit family BED33_RS08305 PF01636 Phosphotransferase enzyme family BED33_RS08310 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB BED33_RS08310 PF08479 POTRA domain, ShlB-type BED33_RS08325 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BED33_RS08325 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BED33_RS08325 PF09317 Domain of unknown function (DUF1974) BED33_RS08330 PF13580 SIS domain BED33_RS08335 PF13230 Glutamine amidotransferases class-II BED33_RS08340 PF03734 L,D-transpeptidase catalytic domain BED33_RS08345 PF11973 NQRA C-terminal domain BED33_RS08345 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) BED33_RS08350 PF03116 NQR2, RnfD, RnfE family BED33_RS08355 PF04205 FMN-binding domain BED33_RS08360 PF02508 Rnf-Nqr subunit, membrane protein BED33_RS08370 PF00970 Oxidoreductase FAD-binding domain BED33_RS08370 PF00111 2Fe-2S iron-sulfur cluster binding domain BED33_RS08370 PF00175 Oxidoreductase NAD-binding domain BED33_RS08375 PF02424 ApbE family BED33_RS08380 PF04400 (Na+)-NQR maturation NqrM BED33_RS08385 PF03009 Glycerophosphoryl diester phosphodiesterase family BED33_RS08390 PF07478 D-ala D-ala ligase C-terminus BED33_RS08390 PF01820 D-ala D-ala ligase N-terminus BED33_RS08395 PF08348 YheO-like PAS domain BED33_RS08395 PF13309 HTH domain BED33_RS08400 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS08410 PF00817 impB/mucB/samB family BED33_RS08410 PF11799 impB/mucB/samB family C-terminal domain BED33_RS08410 PF11798 IMS family HHH motif BED33_RS08415 PF07687 Peptidase dimerisation domain BED33_RS08415 PF01546 Peptidase family M20/M25/M40 BED33_RS08420 PF00156 Phosphoribosyl transferase domain BED33_RS08425 PF02371 Transposase IS116/IS110/IS902 family BED33_RS08425 PF01548 Transposase BED33_RS08430 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) BED33_RS08435 PF07417 Sigma factor-binding transcriptional regulator Crl BED33_RS08440 PF01472 PUA domain BED33_RS08440 PF00696 Amino acid kinase family BED33_RS08445 PF00171 Aldehyde dehydrogenase family BED33_RS08450 PF00392 Bacterial regulatory proteins, gntR family BED33_RS08450 PF07702 UTRA domain BED33_RS08455 PF02378 Phosphotransferase system, EIIC BED33_RS08455 PF00367 phosphotransferase system, EIIB BED33_RS08460 PF11975 Family 4 glycosyl hydrolase C-terminal domain BED33_RS08460 PF02056 Family 4 glycosyl hydrolase BED33_RS08465 PF07317 Flagellar regulator YcgR BED33_RS08465 PF07238 PilZ domain BED33_RS08470 PF06165 Glycosyltransferase family 36 BED33_RS08470 PF10091 Putative glucoamylase BED33_RS08470 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain BED33_RS08485 PF08241 Methyltransferase domain BED33_RS08505 PF00593 TonB dependent receptor BED33_RS08505 PF07715 TonB-dependent Receptor Plug Domain BED33_RS08510 PF01202 Shikimate kinase BED33_RS08515 PF06865 Pyrimidine/purine nucleoside phosphorylase BED33_RS08520 PF04381 Putative exonuclease, RdgC BED33_RS08525 PF00480 ROK family BED33_RS08530 PF13476 AAA domain BED33_RS08535 PF00149 Calcineurin-like phosphoesterase BED33_RS08535 PF12320 Type 5 capsule protein repressor C-terminal domain BED33_RS08540 PF00072 Response regulator receiver domain BED33_RS08540 PF00486 Transcriptional regulatory protein, C terminal BED33_RS08545 PF11808 Phosphate regulon sensor protein PhoR BED33_RS08545 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS08545 PF00989 PAS fold BED33_RS08550 PF12849 PBP superfamily domain BED33_RS08555 PF05525 Branched-chain amino acid transport protein BED33_RS08560 PF00324 Amino acid permease BED33_RS08565 PF00128 Alpha amylase, catalytic domain BED33_RS08565 PF02903 Alpha amylase, N-terminal ig-like domain BED33_RS08580 PF01848 Hok/gef family BED33_RS08585 PF10417 C-terminal domain of 1-Cys peroxiredoxin BED33_RS08585 PF00578 AhpC/TSA family BED33_RS08590 PF04336 Acyl carrier protein phosphodiesterase BED33_RS08595 PF02547 Queuosine biosynthesis protein BED33_RS08605 PF01702 Queuine tRNA-ribosyltransferase BED33_RS08610 PF02699 Preprotein translocase subunit BED33_RS08615 PF07549 SecD/SecF GG Motif BED33_RS08615 PF13721 SecD export protein N-terminal TM region BED33_RS08615 PF02355 Protein export membrane protein BED33_RS08620 PF02355 Protein export membrane protein BED33_RS08620 PF07549 SecD/SecF GG Motif BED33_RS08635 PF03477 ATP cone domain BED33_RS08640 PF01872 RibD C-terminal domain BED33_RS08640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BED33_RS08645 PF00885 6,7-dimethyl-8-ribityllumazine synthase BED33_RS08650 PF01029 NusB family BED33_RS08655 PF02769 AIR synthase related protein, C-terminal domain BED33_RS08655 PF00586 AIR synthase related protein, N-terminal domain BED33_RS08660 PF04608 Phosphatidylglycerophosphatase A BED33_RS08665 PF02371 Transposase IS116/IS110/IS902 family BED33_RS08665 PF01548 Transposase BED33_RS08670 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BED33_RS08670 PF02779 Transketolase, pyrimidine binding domain BED33_RS08670 PF02780 Transketolase, C-terminal domain BED33_RS08675 PF00348 Polyprenyl synthetase BED33_RS08680 PF02609 Exonuclease VII small subunit BED33_RS08685 PF02568 Thiamine biosynthesis protein (ThiI) BED33_RS08685 PF02926 THUMP domain BED33_RS08690 PF01965 DJ-1/PfpI family BED33_RS08695 PF08546 Ketopantoate reductase PanE/ApbA C terminal BED33_RS08695 PF02558 Ketopantoate reductase PanE/ApbA BED33_RS08700 PF04461 Protein of unknown function (DUF520) BED33_RS08705 PF07690 Major Facilitator Superfamily BED33_RS08710 PF01040 UbiA prenyltransferase family BED33_RS08715 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BED33_RS08720 PF00510 Cytochrome c oxidase subunit III BED33_RS08725 PF00115 Cytochrome C and Quinol oxidase polypeptide I BED33_RS08730 PF06481 COX Aromatic Rich Motif BED33_RS08730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BED33_RS08735 PF03502 Nucleoside-specific channel-forming protein, Tsx BED33_RS08740 PF07690 Major Facilitator Superfamily BED33_RS08745 PF03923 Uncharacterized lipoprotein BED33_RS08745 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BED33_RS08750 PF01722 BolA-like protein BED33_RS08760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED33_RS08760 PF05698 Bacterial trigger factor protein (TF) C-terminus BED33_RS08760 PF05697 Bacterial trigger factor protein (TF) BED33_RS08765 PF00574 Clp protease BED33_RS08770 PF07724 AAA domain (Cdc48 subfamily) BED33_RS08770 PF10431 C-terminal, D2-small domain, of ClpB protein BED33_RS08770 PF06689 ClpX C4-type zinc finger BED33_RS08775 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS08775 PF02190 ATP-dependent protease La (LON) substrate-binding domain BED33_RS08775 PF05362 Lon protease (S16) C-terminal proteolytic domain BED33_RS08780 PF00216 Bacterial DNA-binding protein BED33_RS08785 PF13145 PPIC-type PPIASE domain BED33_RS08800 PF06508 Queuosine biosynthesis protein QueC BED33_RS08805 PF12793 Sugar transport-related sRNA regulator N-term BED33_RS08805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS08820 PF01037 Lrp/AsnC ligand binding domain BED33_RS08820 PF13404 AsnC-type helix-turn-helix domain BED33_RS08825 PF00664 ABC transporter transmembrane region BED33_RS08825 PF00005 ABC transporter BED33_RS08830 PF00664 ABC transporter transmembrane region BED33_RS08830 PF00005 ABC transporter BED33_RS08835 PF00543 Nitrogen regulatory protein P-II BED33_RS08840 PF00909 Ammonium Transporter Family BED33_RS08850 PF09619 Type III secretion system lipoprotein chaperone (YscW) BED33_RS08855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BED33_RS08865 PF05321 Haemolysin expression modulating protein BED33_RS08870 PF10757 Biofilm formation regulator YbaJ BED33_RS08880 PF00005 ABC transporter BED33_RS08885 PF00950 ABC 3 transport family BED33_RS08890 PF01297 Zinc-uptake complex component A periplasmic BED33_RS08895 PF00444 Ribosomal protein L36 BED33_RS08900 PF01197 Ribosomal protein L31 BED33_RS08905 PF10797 Protein of unknown function BED33_RS08910 PF10941 Protein of unknown function DUF2620 BED33_RS08915 PF01676 Metalloenzyme superfamily BED33_RS08920 PF01168 Alanine racemase, N-terminal domain BED33_RS08930 PF00873 AcrB/AcrD/AcrF family BED33_RS08935 PF00529 HlyD membrane-fusion protein of T1SS BED33_RS08935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS08940 PF00440 Bacterial regulatory proteins, tetR family BED33_RS08940 PF08361 MAATS-type transcriptional repressor, C-terminal region BED33_RS08945 PF02635 DsrE/DsrF-like family BED33_RS08955 PF10689 Protein of unknown function (DUF2496) BED33_RS08965 PF04304 Protein of unknown function (DUF454) BED33_RS08970 PF00156 Phosphoribosyl transferase domain BED33_RS08975 PF12170 DNA polymerase III tau subunit V interacting with alpha BED33_RS08975 PF12169 DNA polymerase III subunits gamma and tau domain III BED33_RS08975 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding BED33_RS08980 PF02575 YbaB/EbfC DNA-binding family BED33_RS08985 PF13662 Toprim domain BED33_RS08985 PF02132 RecR protein BED33_RS08990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS08990 PF00183 Hsp90 protein BED33_RS08995 PF05191 Adenylate kinase, active site lid BED33_RS09000 PF00762 Ferrochelatase BED33_RS09005 PF01943 Polysaccharide biosynthesis protein BED33_RS09010 PF00535 Glycosyl transferase family 2 BED33_RS09010 PF01501 Glycosyl transferase family 8 BED33_RS09015 PF00535 Glycosyl transferase family 2 BED33_RS09020 PF13439 Glycosyltransferase Family 4 BED33_RS09020 PF00534 Glycosyl transferases group 1 BED33_RS09025 PF04101 Glycosyltransferase family 28 C-terminal domain BED33_RS09025 PF03033 Glycosyltransferase family 28 N-terminal domain BED33_RS09030 PF00953 Glycosyl transferase family 4 BED33_RS09035 PF02719 Polysaccharide biosynthesis protein BED33_RS09040 PF13439 Glycosyltransferase Family 4 BED33_RS09040 PF00534 Glycosyl transferases group 1 BED33_RS09045 PF16363 GDP-mannose 4,6 dehydratase BED33_RS09050 PF00294 pfkB family carbohydrate kinase BED33_RS09055 PF02254 TrkA-N domain BED33_RS09055 PF00999 Sodium/hydrogen exchanger family BED33_RS09060 PF07690 Major Facilitator Superfamily BED33_RS09065 PF00149 Calcineurin-like phosphoesterase BED33_RS09065 PF02872 5'-nucleotidase, C-terminal domain BED33_RS09075 PF04073 Aminoacyl-tRNA editing domain BED33_RS09080 PF01963 TraB family BED33_RS09085 PF00403 Heavy-metal-associated domain BED33_RS09090 PF13411 MerR HTH family regulatory protein BED33_RS09095 PF01957 NfeD-like C-terminal, partner-binding BED33_RS09100 PF16200 C-terminal region of band_7 BED33_RS09100 PF01145 SPFH domain / Band 7 family BED33_RS09105 PF00085 Thioredoxin BED33_RS09110 PF00106 short chain dehydrogenase BED33_RS09115 PF13472 GDSL-like Lipase/Acylhydrolase family BED33_RS09120 PF00005 ABC transporter BED33_RS09130 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BED33_RS09130 PF02222 ATP-grasp domain BED33_RS09135 PF00731 AIR carboxylase BED33_RS09140 PF00149 Calcineurin-like phosphoesterase BED33_RS09145 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BED33_RS09150 PF01406 tRNA synthetases class I (C) catalytic domain BED33_RS09150 PF09190 DALR domain BED33_RS09160 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BED33_RS09160 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BED33_RS09170 PF00589 Phage integrase family BED33_RS09175 PF05063 MT-A70 BED33_RS09220 PF12684 PDDEXK-like domain of unknown function (DUF3799) BED33_RS09220 PF06630 Enterobacterial exodeoxyribonuclease VIII BED33_RS09285 PF01695 IstB-like ATP binding protein BED33_RS09320 PF07102 Protein of unknown function (DUF1364) BED33_RS09325 PF05866 Endodeoxyribonuclease RusA BED33_RS09370 PF06440 DNA polymerase III, theta subunit BED33_RS09445 PF04984 Phage tail sheath protein subtilisin-like domain BED33_RS09445 PF17482 Phage tail sheath C-terminal domain BED33_RS09505 PF01757 Acyltransferase family BED33_RS09510 PF00589 Phage integrase family BED33_RS09515 PF05063 MT-A70 BED33_RS09610 PF00717 Peptidase S24-like BED33_RS09610 PF01381 Helix-turn-helix BED33_RS09635 PF03796 DnaB-like helicase C terminal domain BED33_RS09635 PF00772 DnaB-like helicase N terminal domain BED33_RS09685 PF00149 Calcineurin-like phosphoesterase BED33_RS09725 PF00959 Phage lysozyme BED33_RS09730 PF03245 Bacteriophage Rz lysis protein BED33_RS09890 PF00589 Phage integrase family BED33_RS09890 PF14659 Phage integrase, N-terminal SAM-like domain BED33_RS09890 PF13356 Arm DNA-binding domain BED33_RS09895 PF00589 Phage integrase family BED33_RS09895 PF13356 Arm DNA-binding domain BED33_RS09895 PF14659 Phage integrase, N-terminal SAM-like domain BED33_RS09900 PF13356 Arm DNA-binding domain BED33_RS09900 PF14659 Phage integrase, N-terminal SAM-like domain BED33_RS09900 PF00589 Phage integrase family BED33_RS09915 PF13784 Fic/DOC family N-terminal BED33_RS09915 PF02661 Fic/DOC family BED33_RS09970 PF00717 Peptidase S24-like BED33_RS09980 PF00486 Transcriptional regulatory protein, C terminal BED33_RS09980 PF00072 Response regulator receiver domain BED33_RS09990 PF02371 Transposase IS116/IS110/IS902 family BED33_RS09990 PF01548 Transposase BED33_RS10000 PF08007 Cupin superfamily protein BED33_RS10010 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BED33_RS10015 PF00005 ABC transporter BED33_RS10015 PF00664 ABC transporter transmembrane region BED33_RS10030 PF00149 Calcineurin-like phosphoesterase BED33_RS10045 PF00313 'Cold-shock' DNA-binding domain BED33_RS10050 PF00313 'Cold-shock' DNA-binding domain BED33_RS10055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BED33_RS10060 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS10060 PF05230 MASE2 domain BED33_RS10065 PF02416 mttA/Hcf106 family BED33_RS10070 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BED33_RS10070 PF04055 Radical SAM superfamily BED33_RS10075 PF03099 Biotin/lipoate A/B protein ligase family BED33_RS10080 PF04359 Protein of unknown function (DUF493) BED33_RS10085 PF00768 D-alanyl-D-alanine carboxypeptidase BED33_RS10085 PF07943 Penicillin-binding protein 5, C-terminal domain BED33_RS10090 PF03330 Lytic transglycolase BED33_RS10090 PF05036 Sporulation related domain BED33_RS10095 PF01098 Cell cycle protein BED33_RS10100 PF03717 Penicillin-binding Protein dimerisation domain BED33_RS10100 PF00905 Penicillin binding protein transpeptidase domain BED33_RS10105 PF02590 Predicted SPOUT methyltransferase BED33_RS10115 PF01467 Cytidylyltransferase-like BED33_RS10120 PF14840 Processivity clamp loader gamma complex DNA pol III C-term BED33_RS10120 PF06144 DNA polymerase III, delta subunit BED33_RS10125 PF04390 Lipopolysaccharide-assembly BED33_RS10130 PF00133 tRNA synthetases class I (I, L, M and V) BED33_RS10130 PF13603 Leucyl-tRNA synthetase, Domain 2 BED33_RS10130 PF08264 Anticodon-binding domain of tRNA BED33_RS10135 PF07295 Zinc-ribbon containing domain BED33_RS10140 PF00005 ABC transporter BED33_RS10145 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10150 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10155 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS10165 PF00795 Carbon-nitrogen hydrolase BED33_RS10170 PF00571 CBS domain BED33_RS10170 PF03471 Transporter associated domain BED33_RS10175 PF02130 Uncharacterized protein family UPF0054 BED33_RS10180 PF02562 PhoH-like protein BED33_RS10185 PF00919 Uncharacterized protein family UPF0004 BED33_RS10185 PF04055 Radical SAM superfamily BED33_RS10185 PF01938 TRAM domain BED33_RS10190 PF01494 FAD binding domain BED33_RS10225 PF13537 Glutamine amidotransferase domain BED33_RS10225 PF00733 Asparagine synthase BED33_RS10230 PF13344 Haloacid dehalogenase-like hydrolase BED33_RS10235 PF01047 MarR family BED33_RS10235 PF00480 ROK family BED33_RS10240 PF01979 Amidohydrolase family BED33_RS10245 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BED33_RS10255 PF00749 tRNA synthetases class I (E and Q), catalytic domain BED33_RS10255 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain BED33_RS10260 PF03573 outer membrane porin, OprD family BED33_RS10265 PF13982 YbfN-like lipoprotein BED33_RS10270 PF02838 Glycosyl hydrolase family 20, domain 2 BED33_RS10270 PF00728 Glycosyl hydrolase family 20, catalytic domain BED33_RS10270 PF03173 Putative carbohydrate binding domain BED33_RS10270 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain BED33_RS10275 PF01475 Ferric uptake regulator family BED33_RS10280 PF00258 Flavodoxin BED33_RS10285 PF00672 HAMP domain BED33_RS10285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS10285 PF02203 Tar ligand binding domain homologue BED33_RS10290 PF01402 Ribbon-helix-helix protein, copG family BED33_RS10295 PF12697 Alpha/beta hydrolase family BED33_RS10300 PF17206 SeqA protein N-terminal domain BED33_RS10300 PF03925 SeqA protein C-terminal domain BED33_RS10305 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BED33_RS10305 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BED33_RS10305 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BED33_RS10305 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BED33_RS10315 PF00892 EamA-like transporter family BED33_RS10320 PF00486 Transcriptional regulatory protein, C terminal BED33_RS10320 PF00072 Response regulator receiver domain BED33_RS10325 PF02702 Osmosensitive K+ channel His kinase sensor domain BED33_RS10325 PF13493 Domain of unknown function (DUF4118) BED33_RS10325 PF13492 GAF domain BED33_RS10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS10325 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS10330 PF02669 K+-transporting ATPase, c chain BED33_RS10340 PF03814 Potassium-transporting ATPase A subunit BED33_RS10345 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) BED33_RS10350 PF10725 Protein of unknown function (DUF2517) BED33_RS10360 PF02794 RTX toxin acyltransferase family BED33_RS10370 PF08349 Protein of unknown function (DUF1722) BED33_RS10375 PF00875 DNA photolyase BED33_RS10375 PF03441 FAD binding domain of DNA photolyase BED33_RS10380 PF02112 cAMP phosphodiesterases class-II BED33_RS10385 PF01784 NIF3 (NGG1p interacting factor 3) BED33_RS10390 PF02682 Carboxyltransferase domain, subdomain C and D BED33_RS10395 PF02626 Carboxyltransferase domain, subdomain A and B BED33_RS10400 PF03746 LamB/YcsF family BED33_RS10415 PF01470 Pyroglutamyl peptidase BED33_RS10420 PF00285 Citrate synthase, C-terminal domain BED33_RS10425 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BED33_RS10430 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BED33_RS10435 PF02910 Fumarate reductase flavoprotein C-term BED33_RS10435 PF00890 FAD binding domain BED33_RS10440 PF13085 2Fe-2S iron-sulfur cluster binding domain BED33_RS10445 PF00676 Dehydrogenase E1 component BED33_RS10445 PF02779 Transketolase, pyrimidine binding domain BED33_RS10445 PF16870 2-oxoglutarate dehydrogenase C-terminal BED33_RS10445 PF16078 2-oxoglutarate dehydrogenase N-terminus BED33_RS10450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BED33_RS10450 PF00364 Biotin-requiring enzyme BED33_RS10450 PF02817 e3 binding domain BED33_RS10455 PF00549 CoA-ligase BED33_RS10455 PF08442 ATP-grasp domain BED33_RS10460 PF02629 CoA binding domain BED33_RS10460 PF00549 CoA-ligase BED33_RS10465 PF02872 5'-nucleotidase, C-terminal domain BED33_RS10465 PF00149 Calcineurin-like phosphoesterase BED33_RS10470 PF01654 Cytochrome bd terminal oxidase subunit I BED33_RS10475 PF02322 Cytochrome bd terminal oxidase subunit II BED33_RS10480 PF08173 Membrane bound YbgT-like protein BED33_RS10485 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) BED33_RS10490 PF03061 Thioesterase superfamily BED33_RS10495 PF01618 MotA/TolQ/ExbB proton channel family BED33_RS10500 PF02472 Biopolymer transport protein ExbD/TolR BED33_RS10505 PF06519 TolA C-terminal BED33_RS10505 PF06519 TolA C-terminal BED33_RS10510 PF04052 TolB amino-terminal domain BED33_RS10510 PF07676 WD40-like Beta Propeller Repeat BED33_RS10515 PF00691 OmpA family BED33_RS10520 PF16331 TolA binding protein trimerisation BED33_RS10520 PF13174 Tetratricopeptide repeat BED33_RS10545 PF02445 Quinolinate synthetase A protein BED33_RS10550 PF04973 Nicotinamide mononucleotide transporter BED33_RS10555 PF01545 Cation efflux family BED33_RS10560 PF00793 DAHP synthetase I family BED33_RS10565 PF00300 Histidine phosphatase superfamily (branch 1) BED33_RS10570 PF01223 DNA/RNA non-specific endonuclease BED33_RS10590 PF01263 Aldose 1-epimerase BED33_RS10595 PF10509 Galactokinase galactose-binding signature BED33_RS10595 PF08544 GHMP kinases C terminal BED33_RS10595 PF00288 GHMP kinases N terminal domain BED33_RS10600 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BED33_RS10600 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BED33_RS10605 PF16363 GDP-mannose 4,6 dehydratase BED33_RS10615 PF00005 ABC transporter BED33_RS10620 PF03459 TOBE domain BED33_RS10620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS10625 PF10766 Multidrug efflux pump-associated protein AcrZ BED33_RS10635 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10640 PF03459 TOBE domain BED33_RS10640 PF00005 ABC transporter BED33_RS10650 PF10282 Lactonase, 7-bladed beta-propeller BED33_RS10655 PF00202 Aminotransferase class-III BED33_RS10660 PF06968 Biotin and Thiamin Synthesis associated domain BED33_RS10660 PF04055 Radical SAM superfamily BED33_RS10665 PF00155 Aminotransferase class I and II BED33_RS10670 PF08241 Methyltransferase domain BED33_RS10680 PF00005 ABC transporter BED33_RS10685 PF17757 UvrB interaction domain BED33_RS10685 PF12344 Ultra-violet resistance protein B BED33_RS10685 PF02151 UvrB/uvrC motif BED33_RS10685 PF04851 Type III restriction enzyme, res subunit BED33_RS10685 PF00271 Helicase conserved C-terminal domain BED33_RS10690 PF09905 DNA-binding protein VF530 BED33_RS10695 PF01933 Uncharacterised protein family UPF0052 BED33_RS10700 PF04055 Radical SAM superfamily BED33_RS10700 PF06463 Molybdenum Cofactor Synthesis C BED33_RS10705 PF01967 MoaC family BED33_RS10710 PF02597 ThiS family BED33_RS10715 PF02391 MoaE protein BED33_RS10720 PF01027 Inhibitor of apoptosis-promoting Bax1 BED33_RS10735 PF00005 ABC transporter BED33_RS10740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS10745 PF09209 Tetracyclin repressor-like, C-terminal domain BED33_RS10745 PF00440 Bacterial regulatory proteins, tetR family BED33_RS10750 PF00270 DEAD/DEAH box helicase BED33_RS10750 PF00271 Helicase conserved C-terminal domain BED33_RS10755 PF01207 Dihydrouridine synthase (Dus) BED33_RS10765 PF03448 MgtE intracellular N domain BED33_RS10765 PF01769 Divalent cation transporter BED33_RS10765 PF00571 CBS domain BED33_RS10770 PF00768 D-alanyl-D-alanine carboxypeptidase BED33_RS10775 PF09330 D-lactate dehydrogenase, membrane binding BED33_RS10775 PF01565 FAD binding domain BED33_RS10780 PF01928 CYTH domain BED33_RS10785 PF01844 HNH endonuclease BED33_RS10795 PF04226 Transglycosylase associated protein BED33_RS10800 PF00005 ABC transporter BED33_RS10810 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10815 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10820 PF07308 Protein of unknown function (DUF1456) BED33_RS10830 PF02653 Branched-chain amino acid transport system / permease component BED33_RS10835 PF02653 Branched-chain amino acid transport system / permease component BED33_RS10840 PF00005 ABC transporter BED33_RS10845 PF00005 ABC transporter BED33_RS10850 PF00581 Rhodanese-like domain BED33_RS10865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BED33_RS10875 PF00005 ABC transporter BED33_RS10880 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10895 PF03466 LysR substrate binding domain BED33_RS10895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS10905 PF00892 EamA-like transporter family BED33_RS10915 PF00267 Gram-negative porin BED33_RS10920 PF13307 Helicase C-terminal domain BED33_RS10920 PF06733 DEAD_2 BED33_RS10925 PF00230 Major intrinsic protein BED33_RS10930 PF02885 Glycosyl transferase family, helical bundle domain BED33_RS10950 PF05971 RNA methyltransferase BED33_RS10955 PF08447 PAS fold BED33_RS10955 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS10955 PF13426 PAS domain BED33_RS10960 PF00005 ABC transporter BED33_RS10965 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS10970 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS10975 PF01258 Prokaryotic dksA/traR C4-type zinc finger BED33_RS10980 PF00210 Ferritin-like domain BED33_RS10985 PF13847 Methyltransferase domain BED33_RS11000 PF02469 Fasciclin domain BED33_RS11010 PF00892 EamA-like transporter family BED33_RS11020 PF13505 Outer membrane protein beta-barrel domain BED33_RS11040 PF00005 ABC transporter BED33_RS11040 PF12848 ABC transporter BED33_RS11045 PF02371 Transposase IS116/IS110/IS902 family BED33_RS11045 PF01548 Transposase BED33_RS11050 PF00899 ThiF family BED33_RS11055 PF03453 MoeA N-terminal region (domain I and II) BED33_RS11055 PF03454 MoeA C-terminal region (domain IV) BED33_RS11055 PF00994 Probable molybdopterin binding domain BED33_RS11070 PF02687 FtsX-like permease family BED33_RS11070 PF12704 MacB-like periplasmic core domain BED33_RS11070 PF00005 ABC transporter BED33_RS11090 PF00756 Putative esterase BED33_RS11095 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS11095 PF00107 Zinc-binding dehydrogenase BED33_RS11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS11100 PF03466 LysR substrate binding domain BED33_RS11105 PF06779 Uncharacterised MFS-type transporter YbfB BED33_RS11110 PF01227 GTP cyclohydrolase I BED33_RS11115 PF04235 Protein of unknown function (DUF418) BED33_RS11120 PF00356 Bacterial regulatory proteins, lacI family BED33_RS11125 PF13407 Periplasmic binding protein domain BED33_RS11130 PF00005 ABC transporter BED33_RS11135 PF02653 Branched-chain amino acid transport system / permease component BED33_RS11140 PF01590 GAF domain BED33_RS11140 PF00158 Sigma-54 interaction domain BED33_RS11150 PF13247 4Fe-4S dicluster domain BED33_RS11150 PF12800 4Fe-4S binding domain BED33_RS11155 PF01750 Hydrogenase maturation protease BED33_RS11160 PF07450 Formate hydrogenlyase maturation protein HycH BED33_RS11165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BED33_RS11170 PF12838 4Fe-4S dicluster domain BED33_RS11175 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BED33_RS11175 PF00374 Nickel-dependent hydrogenase BED33_RS11175 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BED33_RS11180 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BED33_RS11180 PF00361 Proton-conducting membrane transporter BED33_RS11185 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BED33_RS11190 PF00361 Proton-conducting membrane transporter BED33_RS11190 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BED33_RS11195 PF00146 NADH dehydrogenase BED33_RS11200 PF00361 Proton-conducting membrane transporter BED33_RS11205 PF00037 4Fe-4S binding domain BED33_RS11205 PF12798 4Fe-4S binding domain BED33_RS11210 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA BED33_RS11215 PF01455 HupF/HypC family BED33_RS11220 PF02698 DUF218 domain BED33_RS11225 PF00390 Malic enzyme, N-terminal domain BED33_RS11225 PF03949 Malic enzyme, NAD binding domain BED33_RS11235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BED33_RS11235 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region BED33_RS11240 PF04172 LrgB-like family BED33_RS11245 PF03788 LrgA family BED33_RS11250 PF07690 Major Facilitator Superfamily BED33_RS11270 PF01588 Putative tRNA binding domain BED33_RS11270 PF09334 tRNA synthetases class I (M) BED33_RS11275 PF10609 NUBPL iron-transfer P-loop NTPase BED33_RS11280 PF00485 Phosphoribulokinase / Uridine kinase family BED33_RS11285 PF00692 dUTPase BED33_RS11290 PF05170 AsmA family BED33_RS11295 PF03606 C4-dicarboxylate anaerobic carrier BED33_RS11300 PF03741 Integral membrane protein TerC family BED33_RS11300 PF00571 CBS domain BED33_RS11300 PF03471 Transporter associated domain BED33_RS11310 PF00483 Nucleotidyl transferase BED33_RS11315 PF00535 Glycosyl transferase family 2 BED33_RS11325 PF01061 ABC-2 type transporter BED33_RS11330 PF00005 ABC transporter BED33_RS11335 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase BED33_RS11340 PF01370 NAD dependent epimerase/dehydratase family BED33_RS11345 PF00535 Glycosyl transferase family 2 BED33_RS11345 PF00534 Glycosyl transferases group 1 BED33_RS11360 PF00872 Transposase, Mutator family BED33_RS11385 PF00483 Nucleotidyl transferase BED33_RS11390 PF00483 Nucleotidyl transferase BED33_RS11395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BED33_RS11395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BED33_RS11400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BED33_RS11400 PF01502 Phosphoribosyl-AMP cyclohydrolase BED33_RS11405 PF00977 Histidine biosynthesis protein BED33_RS11410 PF00977 Histidine biosynthesis protein BED33_RS11415 PF00117 Glutamine amidotransferase class-I BED33_RS11420 PF00475 Imidazoleglycerol-phosphate dehydratase BED33_RS11425 PF00155 Aminotransferase class I and II BED33_RS11430 PF00815 Histidinol dehydrogenase BED33_RS11435 PF01634 ATP phosphoribosyltransferase BED33_RS11435 PF08029 HisG, C-terminal domain BED33_RS11445 PF02653 Branched-chain amino acid transport system / permease component BED33_RS11450 PF00005 ABC transporter BED33_RS11455 PF00465 Iron-containing alcohol dehydrogenase BED33_RS11465 PF13520 Amino acid permease BED33_RS11470 PF08411 Exonuclease C-terminal BED33_RS11470 PF00929 Exonuclease BED33_RS11475 PF00501 AMP-binding enzyme BED33_RS11475 PF00550 Phosphopantetheine attachment site BED33_RS11475 PF07993 Male sterility protein BED33_RS11480 PF04632 Fusaric acid resistance protein family BED33_RS11485 PF04363 Protein of unknown function (DUF496) BED33_RS11490 PF02653 Branched-chain amino acid transport system / permease component BED33_RS11495 PF02653 Branched-chain amino acid transport system / permease component BED33_RS11500 PF00005 ABC transporter BED33_RS11505 PF13407 Periplasmic binding protein domain BED33_RS11510 PF00288 GHMP kinases N terminal domain BED33_RS11515 PF00155 Aminotransferase class I and II BED33_RS11520 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS11520 PF10414 Sirohaem synthase dimerisation region BED33_RS11520 PF14824 Sirohaem biosynthesis protein central BED33_RS11525 PF00871 Acetokinase family BED33_RS11530 PF10662 Ethanolamine utilisation - propanediol utilisation BED33_RS11535 PF00936 BMC domain BED33_RS11545 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BED33_RS11545 PF10531 SLBB domain BED33_RS11545 PF13375 RnfC Barrel sandwich hybrid domain BED33_RS11545 PF13237 4Fe-4S dicluster domain BED33_RS11550 PF00465 Iron-containing alcohol dehydrogenase BED33_RS11555 PF00171 Aldehyde dehydrogenase family BED33_RS11560 PF01923 Cobalamin adenosyltransferase BED33_RS11565 PF03319 Ethanolamine utilisation protein EutN/carboxysome BED33_RS11575 PF06130 Phosphate propanoyltransferase BED33_RS11585 PF00936 BMC domain BED33_RS11595 PF08841 Diol dehydratase reactivase ATPase-like domain BED33_RS11595 PF18427 DD-reactivating factor swiveling domain BED33_RS11600 PF02287 Dehydratase small subunit BED33_RS11605 PF02288 Dehydratase medium subunit BED33_RS11610 PF02286 Dehydratase large subunit BED33_RS11615 PF00936 BMC domain BED33_RS11620 PF00936 BMC domain BED33_RS11625 PF00230 Major intrinsic protein BED33_RS11630 PF12833 Helix-turn-helix domain BED33_RS11630 PF10114 Sensory domain found in PocR BED33_RS11635 PF07685 CobB/CobQ-like glutamine amidotransferase domain BED33_RS11635 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BED33_RS11645 PF02570 Precorrin-8X methylmutase BED33_RS11650 PF01888 CbiD BED33_RS11655 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS11660 PF05175 Methyltransferase small domain BED33_RS11665 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS11670 PF11761 Cobalamin biosynthesis central region BED33_RS11670 PF11760 Cobalamin synthesis G N-terminal BED33_RS11670 PF01890 Cobalamin synthesis G C-terminus BED33_RS11675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS11680 PF02571 Precorrin-6x reductase CbiJ/CobK BED33_RS11685 PF06180 Cobalt chelatase (CbiK) BED33_RS11690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BED33_RS11695 PF01891 Cobalt uptake substrate-specific transmembrane region BED33_RS11700 PF02553 Cobalt transport protein component CbiN BED33_RS11705 PF02361 Cobalt transport protein BED33_RS11710 PF00005 ABC transporter BED33_RS11715 PF07685 CobB/CobQ-like glutamine amidotransferase domain BED33_RS11725 PF02654 Cobalamin-5-phosphate synthase BED33_RS11730 PF00300 Histidine phosphatase superfamily (branch 1) BED33_RS11735 PF02277 Phosphoribosyltransferase BED33_RS11775 PF06744 Type VI secretion protein IcmF C-terminal BED33_RS11775 PF14331 ImcF-related N-terminal domain BED33_RS11775 PF06761 Intracellular multiplication and human macrophage-killing BED33_RS11780 PF04717 Type VI secretion system, phage-baseplate injector BED33_RS11795 PF07024 ImpE protein BED33_RS11805 PF00764 Arginosuccinate synthase BED33_RS11810 PF01554 MatE BED33_RS11820 PF02581 Thiamine monophosphate synthase BED33_RS11830 PF00455 DeoR C terminal sensor domain BED33_RS11830 PF08220 DeoR-like helix-turn-helix domain BED33_RS11835 PF00144 Beta-lactamase BED33_RS11840 PF01584 CheW-like domain BED33_RS11840 PF00072 Response regulator receiver domain BED33_RS11850 PF00392 Bacterial regulatory proteins, gntR family BED33_RS11850 PF00155 Aminotransferase class I and II BED33_RS11860 PF08546 Ketopantoate reductase PanE/ApbA C terminal BED33_RS11860 PF02558 Ketopantoate reductase PanE/ApbA BED33_RS11870 PF08402 TOBE domain BED33_RS11870 PF00005 ABC transporter BED33_RS11875 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS11885 PF07690 Major Facilitator Superfamily BED33_RS11890 PF07730 Histidine kinase BED33_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS11890 PF05231 MASE1 BED33_RS11895 PF00072 Response regulator receiver domain BED33_RS11895 PF00196 Bacterial regulatory proteins, luxR family BED33_RS11900 PF12431 Transcriptional regulator BED33_RS11900 PF00072 Response regulator receiver domain BED33_RS11905 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BED33_RS11905 PF00989 PAS fold BED33_RS11905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS11905 PF17203 Single cache domain 3 BED33_RS11915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS11915 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BED33_RS11915 PF17203 Single cache domain 3 BED33_RS11915 PF00989 PAS fold BED33_RS11920 PF08218 Citrate lyase ligase C-terminal domain BED33_RS11925 PF06857 Malonate decarboxylase delta subunit (MdcD) BED33_RS11930 PF03328 HpcH/HpaI aldolase/citrate lyase family BED33_RS11935 PF04223 Citrate lyase, alpha subunit (CitF) BED33_RS11940 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase BED33_RS11940 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BED33_RS11945 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase BED33_RS11950 PF00939 Sodium:sulfate symporter transmembrane region BED33_RS11965 PF03480 Bacterial extracellular solute-binding protein, family 7 BED33_RS11975 PF01648 4'-phosphopantetheinyl transferase superfamily BED33_RS11975 PF17837 4'-phosphopantetheinyl transferase N-terminal domain BED33_RS11985 PF00083 Sugar (and other) transporter BED33_RS11990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED33_RS11990 PF00381 PTS HPr component phosphorylation site BED33_RS11995 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) BED33_RS12000 PF00849 RNA pseudouridylate synthase BED33_RS12025 PF00577 Outer membrane usher protein BED33_RS12025 PF13954 PapC N-terminal domain BED33_RS12025 PF13953 PapC C-terminal domain BED33_RS12030 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS12030 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS12045 PF00072 Response regulator receiver domain BED33_RS12045 PF00196 Bacterial regulatory proteins, luxR family BED33_RS12055 PF06167 Glucose-regulated metallo-peptidase M90 BED33_RS12065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED33_RS12065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED33_RS12090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS12095 PF02371 Transposase IS116/IS110/IS902 family BED33_RS12095 PF01548 Transposase BED33_RS12100 PF00483 Nucleotidyl transferase BED33_RS12110 PF14001 YdfZ protein BED33_RS12125 PF10777 Inner membrane protein YlaC BED33_RS12130 PF16197 Ketoacyl-synthetase C-terminal extension BED33_RS12130 PF02801 Beta-ketoacyl synthase, C-terminal domain BED33_RS12130 PF14765 Polyketide synthase dehydratase BED33_RS12130 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS12130 PF08659 KR domain BED33_RS12130 PF00550 Phosphopantetheine attachment site BED33_RS12130 PF00109 Beta-ketoacyl synthase, N-terminal domain BED33_RS12130 PF00107 Zinc-binding dehydrogenase BED33_RS12130 PF00698 Acyl transferase domain BED33_RS12135 PF00872 Transposase, Mutator family BED33_RS12140 PF02837 Glycosyl hydrolases family 2, sugar binding domain BED33_RS12140 PF16353 Domain of unknown function(DUF4981) BED33_RS12140 PF00703 Glycosyl hydrolases family 2 BED33_RS12140 PF02929 Beta galactosidase small chain BED33_RS12140 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BED33_RS12145 PF00356 Bacterial regulatory proteins, lacI family BED33_RS12150 PF00313 'Cold-shock' DNA-binding domain BED33_RS12155 PF10781 Dextransucrase DSRB BED33_RS12160 PF02203 Tar ligand binding domain homologue BED33_RS12160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS12160 PF00672 HAMP domain BED33_RS12175 PF02308 MgtC family BED33_RS12180 PF00689 Cation transporting ATPase, C-terminus BED33_RS12180 PF00690 Cation transporter/ATPase, N-terminus BED33_RS12185 PF16884 N-terminal domain of oxidoreductase BED33_RS12185 PF00107 Zinc-binding dehydrogenase BED33_RS12190 PF00582 Universal stress protein family BED33_RS12195 PF05247 Flagellar transcriptional activator (FlhD) BED33_RS12200 PF05280 Flagellar transcriptional activator (FlhC) BED33_RS12205 PF01618 MotA/TolQ/ExbB proton channel family BED33_RS12210 PF13677 Membrane MotB of proton-channel complex MotA/MotB BED33_RS12210 PF00691 OmpA family BED33_RS12215 PF01584 CheW-like domain BED33_RS12215 PF09078 CheY binding BED33_RS12215 PF02895 Signal transducing histidine kinase, homodimeric domain BED33_RS12215 PF01627 Hpt domain BED33_RS12215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS12220 PF01584 CheW-like domain BED33_RS12225 PF00672 HAMP domain BED33_RS12225 PF02203 Tar ligand binding domain homologue BED33_RS12225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS12230 PF00672 HAMP domain BED33_RS12230 PF02203 Tar ligand binding domain homologue BED33_RS12230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS12235 PF03705 CheR methyltransferase, all-alpha domain BED33_RS12235 PF01739 CheR methyltransferase, SAM binding domain BED33_RS12240 PF00072 Response regulator receiver domain BED33_RS12240 PF01339 CheB methylesterase BED33_RS12245 PF00072 Response regulator receiver domain BED33_RS12250 PF04344 Chemotaxis phosphatase, CheZ BED33_RS12255 PF00082 Subtilase family BED33_RS12255 PF01483 Proprotein convertase P-domain BED33_RS12260 PF01312 FlhB HrpN YscU SpaS Family BED33_RS12265 PF00771 FHIPEP family BED33_RS12270 PF06366 Flagellar protein FlhE BED33_RS12280 PF05130 FlgN protein BED33_RS12285 PF04316 Anti-sigma-28 factor, FlgM BED33_RS12290 PF17656 FlgA N-terminal domain BED33_RS12290 PF13144 Chaperone for flagella basal body P-ring formation BED33_RS12295 PF00460 Flagella basal body rod protein BED33_RS12300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS12300 PF00460 Flagella basal body rod protein BED33_RS12305 PF03963 Flagellar hook capping protein - N-terminal region BED33_RS12305 PF13860 FlgD Ig-like domain BED33_RS12305 PF13861 FlgD Tudor-like domain BED33_RS12310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS12310 PF07559 Flagellar basal body protein FlaE BED33_RS12310 PF00460 Flagella basal body rod protein BED33_RS12315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS12315 PF00460 Flagella basal body rod protein BED33_RS12320 PF00460 Flagella basal body rod protein BED33_RS12320 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS12325 PF02107 Flagellar L-ring protein BED33_RS12330 PF02119 Flagellar P-ring protein BED33_RS12335 PF10135 Rod binding protein BED33_RS12335 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BED33_RS12340 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BED33_RS12340 PF00460 Flagella basal body rod protein BED33_RS12345 PF00669 Bacterial flagellin N-terminal helical region BED33_RS12350 PF01311 Bacterial export proteins, family 1 BED33_RS12355 PF01313 Bacterial export proteins, family 3 BED33_RS12360 PF00813 FliP family BED33_RS12365 PF04347 Flagellar biosynthesis protein, FliO BED33_RS12370 PF16973 Flagellar motor switch protein FliN N-terminal BED33_RS12370 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BED33_RS12375 PF02154 Flagellar motor switch protein FliM BED33_RS12375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BED33_RS12380 PF03748 Flagellar basal body-associated protein FliL BED33_RS12385 PF02120 Flagellar hook-length control protein FliK BED33_RS12390 PF02050 Flagellar FliJ protein BED33_RS12395 PF18269 T3SS EscN ATPase C-terminal domain BED33_RS12395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED33_RS12400 PF02108 Flagellar assembly protein FliH BED33_RS12405 PF01706 FliG C-terminal domain BED33_RS12405 PF14841 FliG middle domain BED33_RS12405 PF14842 FliG N-terminal domain BED33_RS12410 PF08345 Flagellar M-ring protein C-terminal BED33_RS12410 PF01514 Secretory protein of YscJ/FliF family BED33_RS12415 PF02049 Flagellar hook-basal body complex protein FliE BED33_RS12420 PF12167 Arm DNA-binding domain BED33_RS12420 PF00589 Phage integrase family BED33_RS12440 PF00730 HhH-GPD superfamily base excision DNA repair protein BED33_RS12445 PF01966 HD domain BED33_RS12450 PF12833 Helix-turn-helix domain BED33_RS12455 PF05400 Flagellar protein FliT BED33_RS12460 PF02561 Flagellar protein FliS BED33_RS12465 PF07196 Flagellin hook IN motif BED33_RS12465 PF07195 Flagellar hook-associated protein 2 C-terminus BED33_RS12465 PF02465 Flagellar hook-associated protein 2 N-terminus BED33_RS12470 PF00669 Bacterial flagellin N-terminal helical region BED33_RS12470 PF00700 Bacterial flagellin C-terminal helical region BED33_RS12470 PF08884 Flagellin D3 domain BED33_RS12475 PF00669 Bacterial flagellin N-terminal helical region BED33_RS12475 PF08884 Flagellin D3 domain BED33_RS12475 PF00700 Bacterial flagellin C-terminal helical region BED33_RS12485 PF04542 Sigma-70 region 2 BED33_RS12485 PF04545 Sigma-70, region 4 BED33_RS12485 PF04539 Sigma-70 region 3 BED33_RS12490 PF02899 Phage integrase, N-terminal SAM-like domain BED33_RS12495 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS12500 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS12505 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS12510 PF00005 ABC transporter BED33_RS12525 PF01619 Proline dehydrogenase BED33_RS12525 PF18327 Proline utilization A proline dehydrogenase N-terminal domain BED33_RS12525 PF14850 DNA-binding domain of Proline dehydrogenase BED33_RS12525 PF00171 Aldehyde dehydrogenase family BED33_RS12530 PF00474 Sodium:solute symporter family BED33_RS12550 PF03239 Iron permease FTR1 family BED33_RS12555 PF09375 Imelysin BED33_RS12555 PF13473 Cupredoxin-like domain BED33_RS12560 PF04261 Dyp-type peroxidase family BED33_RS12565 PF03358 NADPH-dependent FMN reductase BED33_RS12575 PF01344 Kelch motif BED33_RS12590 PF01613 Flavin reductase like domain BED33_RS12595 PF00881 Nitroreductase family BED33_RS12600 PF12697 Alpha/beta hydrolase family BED33_RS12605 PF01042 Endoribonuclease L-PSP BED33_RS12610 PF00857 Isochorismatase family BED33_RS12615 PF00296 Luciferase-like monooxygenase BED33_RS12620 PF00440 Bacterial regulatory proteins, tetR family BED33_RS12620 PF08362 YcdC-like protein, C-terminal region BED33_RS12625 PF00324 Amino acid permease BED33_RS12635 PF00589 Phage integrase family BED33_RS12640 PF01527 Transposase BED33_RS12650 PF08241 Methyltransferase domain BED33_RS12665 PF02806 Alpha amylase, C-terminal all-beta domain BED33_RS12665 PF00128 Alpha amylase, catalytic domain BED33_RS12675 PF06942 GlpM protein BED33_RS12680 PF10769 Protein of unknown function (DUF2594) BED33_RS12690 PF08459 UvrC Helix-hairpin-helix N-terminal BED33_RS12690 PF01541 GIY-YIG catalytic domain BED33_RS12690 PF02151 UvrB/uvrC motif BED33_RS12695 PF01066 CDP-alcohol phosphatidyltransferase BED33_RS12715 PF04606 Ogr/Delta-like zinc finger BED33_RS12775 PF01527 Transposase BED33_RS12790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS12790 PF03466 LysR substrate binding domain BED33_RS12800 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS12810 PF06530 Phage antitermination protein Q BED33_RS12815 PF10753 Toxin GhoT_OrtT BED33_RS12825 PF00959 Phage lysozyme BED33_RS12830 PF00561 alpha/beta hydrolase fold BED33_RS12835 PF04391 Protein of unknown function (DUF533) BED33_RS12840 PF03466 LysR substrate binding domain BED33_RS12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS12845 PF00144 Beta-lactamase BED33_RS12850 PF01926 50S ribosome-binding GTPase BED33_RS12850 PF06071 Protein of unknown function (DUF933) BED33_RS12860 PF01195 Peptidyl-tRNA hydrolase BED33_RS12865 PF10762 Protein of unknown function (DUF2583) BED33_RS12875 PF14572 Phosphoribosyl synthetase-associated domain BED33_RS12875 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BED33_RS12880 PF08544 GHMP kinases C terminal BED33_RS12880 PF00288 GHMP kinases N terminal domain BED33_RS12885 PF03550 Outer membrane lipoprotein LolB BED33_RS12890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BED33_RS12890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BED33_RS12890 PF01488 Shikimate / quinate 5-dehydrogenase BED33_RS12895 PF03462 PCRF domain BED33_RS12895 PF00472 RF-1 domain BED33_RS12900 PF13847 Methyltransferase domain BED33_RS12900 PF17827 PrmC N-terminal domain BED33_RS12905 PF04247 Invasion gene expression up-regulator, SirB BED33_RS12910 PF13369 Transglutaminase-like superfamily BED33_RS12915 PF00793 DAHP synthetase I family BED33_RS12920 PF00916 Sulfate permease family BED33_RS12920 PF01740 STAS domain BED33_RS12925 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS12945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED33_RS12950 PF02811 PHP domain BED33_RS12955 PF02613 Nitrate reductase delta subunit BED33_RS12960 PF07273 Protein of unknown function (DUF1439) BED33_RS12965 PF07690 Major Facilitator Superfamily BED33_RS12980 PF13302 Acetyltransferase (GNAT) domain BED33_RS12985 PF04337 Protein of unknown function, DUF480 BED33_RS12990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED33_RS12995 PF03023 Lipid II flippase MurJ BED33_RS13000 PF01699 Sodium/calcium exchanger protein BED33_RS13010 PF07690 Major Facilitator Superfamily BED33_RS13015 PF01548 Transposase BED33_RS13015 PF02371 Transposase IS116/IS110/IS902 family BED33_RS13025 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term BED33_RS13025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS13025 PF07730 Histidine kinase BED33_RS13025 PF00672 HAMP domain BED33_RS13030 PF02322 Cytochrome bd terminal oxidase subunit II BED33_RS13035 PF01654 Cytochrome bd terminal oxidase subunit I BED33_RS13040 PF00155 Aminotransferase class I and II BED33_RS13040 PF00392 Bacterial regulatory proteins, gntR family BED33_RS13045 PF00202 Aminotransferase class-III BED33_RS13050 PF04958 Arginine N-succinyltransferase beta subunit BED33_RS13055 PF00171 Aldehyde dehydrogenase family BED33_RS13060 PF04996 Succinylarginine dihydrolase BED33_RS13065 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family BED33_RS13070 PF01548 Transposase BED33_RS13070 PF02371 Transposase IS116/IS110/IS902 family BED33_RS13075 PF00267 Gram-negative porin BED33_RS13080 PF13333 Integrase core domain BED33_RS13080 PF00665 Integrase core domain BED33_RS13080 PF13276 HTH-like domain BED33_RS13095 PF01979 Amidohydrolase family BED33_RS13100 PF00392 Bacterial regulatory proteins, gntR family BED33_RS13100 PF07702 UTRA domain BED33_RS13105 PF01979 Amidohydrolase family BED33_RS13135 PF01551 Peptidase family M23 BED33_RS13135 PF01476 LysM domain BED33_RS13140 PF01116 Fructose-bisphosphate aldolase class-II BED33_RS13145 PF01380 SIS domain BED33_RS13150 PF03610 PTS system fructose IIA component BED33_RS13155 PF03613 PTS system mannose/fructose/sorbose family IID component BED33_RS13165 PF03830 PTS system sorbose subfamily IIB component BED33_RS13170 PF08013 Tagatose 6 phosphate kinase BED33_RS13175 PF08220 DeoR-like helix-turn-helix domain BED33_RS13175 PF00455 DeoR C terminal sensor domain BED33_RS13185 PF02371 Transposase IS116/IS110/IS902 family BED33_RS13185 PF01548 Transposase BED33_RS13195 PF00849 RNA pseudouridylate synthase BED33_RS13195 PF01479 S4 domain BED33_RS13200 PF03616 Sodium/glutamate symporter BED33_RS13210 PF02371 Transposase IS116/IS110/IS902 family BED33_RS13210 PF01548 Transposase BED33_RS13215 PF01548 Transposase BED33_RS13215 PF02371 Transposase IS116/IS110/IS902 family BED33_RS13220 PF08003 Protein of unknown function (DUF1698) BED33_RS13225 PF13649 Methyltransferase domain BED33_RS13230 PF01124 MAPEG family BED33_RS13235 PF01904 Protein of unknown function DUF72 BED33_RS13240 PF00857 Isochorismatase family BED33_RS13245 PF01336 OB-fold nucleic acid binding domain BED33_RS13245 PF02938 GAD domain BED33_RS13245 PF00152 tRNA synthetases class II (D, K and N) BED33_RS13250 PF00293 NUDIX domain BED33_RS13255 PF01709 Transcriptional regulator BED33_RS13260 PF02075 Crossover junction endodeoxyribonuclease RuvC BED33_RS13265 PF07499 RuvA, C-terminal domain BED33_RS13265 PF01330 RuvA N terminal domain BED33_RS13270 PF17864 RuvB AAA lid domain BED33_RS13270 PF05491 RuvB C-terminal winged helix domain BED33_RS13270 PF05496 Holliday junction DNA helicase RuvB P-loop domain BED33_RS13275 PF00854 POT family BED33_RS13280 PF00950 ABC 3 transport family BED33_RS13285 PF00005 ABC transporter BED33_RS13290 PF01297 Zinc-uptake complex component A periplasmic BED33_RS13295 PF01551 Peptidase family M23 BED33_RS13295 PF08525 Opacity-associated protein A N-terminal motif BED33_RS13295 PF01476 LysM domain BED33_RS13300 PF03279 Bacterial lipid A biosynthesis acyltransferase BED33_RS13315 PF02887 Pyruvate kinase, alpha/beta domain BED33_RS13315 PF00224 Pyruvate kinase, barrel domain BED33_RS13320 PF01418 Helix-turn-helix domain, rpiR family BED33_RS13320 PF01380 SIS domain BED33_RS13325 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BED33_RS13325 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BED33_RS13330 PF01081 KDPG and KHG aldolase BED33_RS13335 PF00893 Small Multidrug Resistance protein BED33_RS13340 PF00893 Small Multidrug Resistance protein BED33_RS13345 PF01042 Endoribonuclease L-PSP BED33_RS13350 PF04851 Type III restriction enzyme, res subunit BED33_RS13350 PF13307 Helicase C-terminal domain BED33_RS13355 PF00814 Glycoprotease family BED33_RS13365 PF13193 AMP-binding enzyme C-terminal domain BED33_RS13365 PF00501 AMP-binding enzyme BED33_RS13370 PF00570 HRDC domain BED33_RS13370 PF01612 3'-5' exonuclease BED33_RS13375 PF03776 Septum formation topological specificity factor MinE BED33_RS13380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BED33_RS13385 PF03775 Septum formation inhibitor MinC, C-terminal domain BED33_RS13385 PF05209 Septum formation inhibitor MinC, N-terminal domain BED33_RS13395 PF05166 YcgL domain BED33_RS13400 PF13406 Transglycosylase SLT domain BED33_RS13405 PF01557 Fumarylacetoacetate (FAA) hydrolase family BED33_RS13410 PF03692 Putative zinc- or iron-chelating domain BED33_RS13435 PF00924 Mechanosensitive ion channel BED33_RS13440 PF02798 Glutathione S-transferase, N-terminal domain BED33_RS13440 PF14834 Glutathione S-transferase, C-terminal domain BED33_RS13460 PF07351 Protein of unknown function (DUF1480) BED33_RS13465 PF00360 Phytochrome region BED33_RS13465 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS13465 PF01590 GAF domain BED33_RS13465 PF00563 EAL domain BED33_RS13490 PF07690 Major Facilitator Superfamily BED33_RS13495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS13495 PF03466 LysR substrate binding domain BED33_RS13500 PF02470 MlaD protein BED33_RS13505 PF04403 Paraquat-inducible protein A BED33_RS13510 PF13185 GAF domain BED33_RS13515 PF17516 ProQ C-terminal domain BED33_RS13515 PF04352 ProQ/FINO family BED33_RS13520 PF00595 PDZ domain BED33_RS13520 PF11818 C-terminal domain of tail specific protease (DUF3340) BED33_RS13520 PF17804 Tail specific protease N-terminal domain BED33_RS13520 PF03572 Peptidase family S41 BED33_RS13525 PF01435 Peptidase family M48 BED33_RS13540 PF14583 Oligogalacturonate lyase BED33_RS13545 PF09339 IclR helix-turn-helix domain BED33_RS13545 PF01614 Bacterial transcriptional regulator BED33_RS13550 PF01510 N-acetylmuramoyl-L-alanine amidase BED33_RS13560 PF04307 LexA-binding, inner membrane-associated putative hydrolase BED33_RS13570 PF06178 Oligogalacturonate-specific porin protein (KdgM) BED33_RS13575 PF01547 Bacterial extracellular solute-binding protein BED33_RS13580 PF03459 TOBE domain BED33_RS13580 PF17912 MalK OB fold domain BED33_RS13580 PF00005 ABC transporter BED33_RS13585 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS13590 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS13595 PF06917 Periplasmic pectate lyase BED33_RS13605 PF04962 KduI/IolB family BED33_RS13610 PF07883 Cupin domain BED33_RS13615 PF00872 Transposase, Mutator family BED33_RS13620 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS13625 PF14002 YniB-like protein BED33_RS13630 PF03466 LysR substrate binding domain BED33_RS13630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS13635 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain BED33_RS13635 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain BED33_RS13640 PF00378 Enoyl-CoA hydratase/isomerase BED33_RS13655 PF03881 Fructosamine kinase BED33_RS13660 PF00950 ABC 3 transport family BED33_RS13665 PF00950 ABC 3 transport family BED33_RS13670 PF00005 ABC transporter BED33_RS13675 PF01297 Zinc-uptake complex component A periplasmic BED33_RS13680 PF01464 Transglycosylase SLT domain BED33_RS13685 PF01914 MarC family integral membrane protein BED33_RS13710 PF04474 Protein of unknown function (DUF554) BED33_RS13715 PF13619 KTSC domain BED33_RS13720 PF03129 Anticodon binding domain BED33_RS13720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BED33_RS13720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BED33_RS13720 PF02824 TGS domain BED33_RS13725 PF00707 Translation initiation factor IF-3, C-terminal domain BED33_RS13725 PF05198 Translation initiation factor IF-3, N-terminal domain BED33_RS13730 PF01632 Ribosomal protein L35 BED33_RS13735 PF00453 Ribosomal protein L20 BED33_RS13740 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BED33_RS13740 PF01409 tRNA synthetases class II core domain (F) BED33_RS13745 PF03147 Ferredoxin-fold anticodon binding domain BED33_RS13745 PF03484 tRNA synthetase B5 domain BED33_RS13745 PF03483 B3/4 domain BED33_RS13745 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BED33_RS13745 PF01588 Putative tRNA binding domain BED33_RS13750 PF00216 Bacterial DNA-binding protein BED33_RS13755 PF13358 DDE superfamily endonuclease BED33_RS13755 PF13592 Winged helix-turn helix BED33_RS13765 PF01032 FecCD transport family BED33_RS13770 PF00255 Glutathione peroxidase BED33_RS13775 PF00005 ABC transporter BED33_RS13780 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BED33_RS13785 PF00535 Glycosyl transferase family 2 BED33_RS13790 PF00551 Formyl transferase BED33_RS13790 PF01370 NAD dependent epimerase/dehydratase family BED33_RS13790 PF02911 Formyl transferase, C-terminal domain BED33_RS13795 PF01522 Polysaccharide deacetylase BED33_RS13800 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase BED33_RS13805 PF00892 EamA-like transporter family BED33_RS13815 PF00877 NlpC/P60 family BED33_RS13825 PF02696 Uncharacterized ACR, YdiU/UPF0061 family BED33_RS13840 PF07715 TonB-dependent Receptor Plug Domain BED33_RS13840 PF00593 TonB dependent receptor BED33_RS13845 PF10636 Hemin uptake protein hemP BED33_RS13850 PF00793 DAHP synthetase I family BED33_RS13855 PF03618 Kinase/pyrophosphorylase BED33_RS13860 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BED33_RS13860 PF02896 PEP-utilising enzyme, TIM barrel domain BED33_RS13860 PF00391 PEP-utilising enzyme, mobile domain BED33_RS13870 PF01594 AI-2E family transporter BED33_RS13875 PF02913 FAD linked oxidases, C-terminal domain BED33_RS13875 PF13183 4Fe-4S dicluster domain BED33_RS13875 PF01565 FAD binding domain BED33_RS13880 PF03061 Thioesterase superfamily BED33_RS13885 PF01521 Iron-sulphur cluster biosynthesis BED33_RS13890 PF01458 Uncharacterized protein family (UPF0051) BED33_RS13895 PF00005 ABC transporter BED33_RS13900 PF01458 Uncharacterized protein family (UPF0051) BED33_RS13905 PF00266 Aminotransferase class-V BED33_RS13910 PF02657 Fe-S metabolism associated domain BED33_RS13915 PF03734 L,D-transpeptidase catalytic domain BED33_RS13915 PF01476 LysM domain BED33_RS13915 PF17969 L,D-transpeptidase C-terminal domain BED33_RS13920 PF04728 Lipoprotein leucine-zipper BED33_RS13925 PF02887 Pyruvate kinase, alpha/beta domain BED33_RS13925 PF00224 Pyruvate kinase, barrel domain BED33_RS13945 PF00677 Lumazine binding domain BED33_RS13955 PF07690 Major Facilitator Superfamily BED33_RS13960 PF03466 LysR substrate binding domain BED33_RS13960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS13965 PF00356 Bacterial regulatory proteins, lacI family BED33_RS13970 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BED33_RS13970 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BED33_RS13975 PF00877 NlpC/P60 family BED33_RS13980 PF00462 Glutaredoxin BED33_RS13985 PF00929 Exonuclease BED33_RS13995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BED33_RS14005 PF00440 Bacterial regulatory proteins, tetR family BED33_RS14005 PF16925 Tetracyclin repressor-like, C-terminal domain BED33_RS14010 PF00884 Sulfatase BED33_RS14010 PF08019 Phosphoethanolamine transferase EptA/EptB BED33_RS14015 PF06945 Protein of unknown function (DUF1289) BED33_RS14020 PF00248 Aldo/keto reductase family BED33_RS14025 PF04632 Fusaric acid resistance protein family BED33_RS14030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS14030 PF00529 HlyD membrane-fusion protein of T1SS BED33_RS14035 PF07869 Protein of unknown function (DUF1656) BED33_RS14040 PF01047 MarR family BED33_RS14045 PF05433 Glycine zipper 2TM domain BED33_RS14050 PF03702 Anhydro-N-acetylmuramic acid kinase BED33_RS14055 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme BED33_RS14060 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region BED33_RS14060 PF01243 Pyridoxamine 5'-phosphate oxidase BED33_RS14065 PF01479 S4 domain BED33_RS14065 PF00579 tRNA synthetases class I (W and Y) BED33_RS14075 PF02798 Glutathione S-transferase, N-terminal domain BED33_RS14075 PF00043 Glutathione S-transferase, C-terminal domain BED33_RS14080 PF11656 YjbD family (DUF3811) BED33_RS14085 PF04893 Yip1 domain BED33_RS14095 PF02371 Transposase IS116/IS110/IS902 family BED33_RS14095 PF01548 Transposase BED33_RS14100 PF00854 POT family BED33_RS14105 PF03466 LysR substrate binding domain BED33_RS14105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS14120 PF00005 ABC transporter BED33_RS14125 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS14125 PF00005 ABC transporter BED33_RS14130 PF12911 N-terminal TM domain of oligopeptide transport permease C BED33_RS14130 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS14140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS14155 PF02954 Bacterial regulatory protein, Fis family BED33_RS14155 PF00158 Sigma-54 interaction domain BED33_RS14160 PF04012 PspA/IM30 family BED33_RS14165 PF06667 Phage shock protein B BED33_RS14170 PF04024 PspC domain BED33_RS14180 PF04317 YcjX-like family, DUF463 BED33_RS14185 PF05128 Domain of unknown function (DUF697) BED33_RS14190 PF08808 RES domain BED33_RS14195 PF09722 Protein of unknown function (DUF2384) BED33_RS14200 PF00158 Sigma-54 interaction domain BED33_RS14200 PF18024 Helix-turn-helix domain BED33_RS14205 PF08534 Redoxin BED33_RS14210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BED33_RS14210 PF13378 Enolase C-terminal domain-like BED33_RS14215 PF00246 Zinc carboxypeptidase BED33_RS14220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS14225 PF01544 CorA-like Mg2+ transporter protein BED33_RS14230 PF01171 PP-loop family BED33_RS14235 PF00388 Phosphatidylinositol-specific phospholipase C, X domain BED33_RS14245 PF00893 Small Multidrug Resistance protein BED33_RS14250 PF02308 MgtC family BED33_RS14255 PF03891 Domain of unknown function (DUF333) BED33_RS14260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_RS14260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED33_RS14265 PF11739 Dicarboxylate transport BED33_RS14270 PF13617 YnbE-like lipoprotein BED33_RS14275 PF07027 Protein of unknown function (DUF1318) BED33_RS14280 PF02525 Flavodoxin-like fold BED33_RS14285 PF04408 Helicase associated domain (HA2) BED33_RS14285 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold BED33_RS14285 PF00271 Helicase conserved C-terminal domain BED33_RS14285 PF00270 DEAD/DEAH box helicase BED33_RS14285 PF11898 Domain of unknown function (DUF3418) BED33_RS14300 PF00089 Trypsin BED33_RS14310 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BED33_RS14315 PF00672 HAMP domain BED33_RS14315 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS14315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS14320 PF00486 Transcriptional regulatory protein, C terminal BED33_RS14320 PF00072 Response regulator receiver domain BED33_RS14330 PF13520 Amino acid permease BED33_RS14335 PF07338 Protein of unknown function (DUF1471) BED33_RS14345 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch BED33_RS14345 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BED33_RS14345 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BED33_RS14350 PF02233 NAD(P) transhydrogenase beta subunit BED33_RS14355 PF00582 Universal stress protein family BED33_RS14360 PF13545 Crp-like helix-turn-helix domain BED33_RS14360 PF00027 Cyclic nucleotide-binding domain BED33_RS14365 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BED33_RS14365 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BED33_RS14380 PF06445 GyrI-like small molecule binding domain BED33_RS14395 PF00294 pfkB family carbohydrate kinase BED33_RS14400 PF00872 Transposase, Mutator family BED33_RS14410 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS14415 PF01842 ACT domain BED33_RS14420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS14420 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS14420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS14430 PF01510 N-acetylmuramoyl-L-alanine amidase BED33_RS14455 PF02798 Glutathione S-transferase, N-terminal domain BED33_RS14465 PF00106 short chain dehydrogenase BED33_RS14470 PF03466 LysR substrate binding domain BED33_RS14470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS14475 PF07690 Major Facilitator Superfamily BED33_RS14490 PF05472 DNA replication terminus site-binding protein (Ter protein) BED33_RS14500 PF10415 Fumarase C C-terminus BED33_RS14500 PF00206 Lyase BED33_RS14505 PF01238 Phosphomannose isomerase type I BED33_RS14510 PF06097 Bacterial protein of unknown function (DUF945) BED33_RS14520 PF00356 Bacterial regulatory proteins, lacI family BED33_RS14520 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED33_RS14525 PF00367 phosphotransferase system, EIIB BED33_RS14525 PF02378 Phosphotransferase system, EIIC BED33_RS14530 PF00155 Aminotransferase class I and II BED33_RS14535 PF00962 Adenosine/AMP deaminase BED33_RS14540 PF13593 SBF-like CPA transporter family (DUF4137) BED33_RS14545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BED33_RS14545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BED33_RS14550 PF12833 Helix-turn-helix domain BED33_RS14550 PF02311 AraC-like ligand binding domain BED33_RS14560 PF00005 ABC transporter BED33_RS14565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED33_RS14570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED33_RS14575 PF11762 L-arabinose isomerase C-terminal domain BED33_RS14575 PF02610 L-arabinose isomerase BED33_RS14585 PF02463 RecF/RecN/SMC N terminal domain BED33_RS14610 PF10754 Protein of unknown function (DUF2569) BED33_RS14615 PF02508 Rnf-Nqr subunit, membrane protein BED33_RS14620 PF04060 Putative Fe-S cluster BED33_RS14625 PF10531 SLBB domain BED33_RS14625 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BED33_RS14625 PF13237 4Fe-4S dicluster domain BED33_RS14625 PF13375 RnfC Barrel sandwich hybrid domain BED33_RS14635 PF12833 Helix-turn-helix domain BED33_RS14635 PF06445 GyrI-like small molecule binding domain BED33_RS14640 PF03116 NQR2, RnfD, RnfE family BED33_RS14645 PF04205 FMN-binding domain BED33_RS14650 PF02508 Rnf-Nqr subunit, membrane protein BED33_RS14655 PF10576 Iron-sulfur binding domain of endonuclease III BED33_RS14655 PF00633 Helix-hairpin-helix motif BED33_RS14655 PF00730 HhH-GPD superfamily base excision DNA repair protein BED33_RS14730 PF00293 NUDIX domain BED33_RS14755 PF03245 Bacteriophage Rz lysis protein BED33_RS14820 PF01695 IstB-like ATP binding protein BED33_RS14845 PF01381 Helix-turn-helix BED33_RS14845 PF00717 Peptidase S24-like BED33_RS14905 PF06630 Enterobacterial exodeoxyribonuclease VIII BED33_RS14905 PF12684 PDDEXK-like domain of unknown function (DUF3799) BED33_RS14925 PF08206 Ribonuclease B OB domain BED33_RS14925 PF00773 RNB domain BED33_RS14925 PF00575 S1 RNA binding domain BED33_RS14930 PF13722 5TM C-terminal transporter carbon starvation CstA BED33_RS14930 PF02554 Carbon starvation protein CstA BED33_RS14935 PF04328 Selenoprotein, putative BED33_RS14940 PF00923 Transaldolase/Fructose-6-phosphate aldolase BED33_RS14945 PF00455 DeoR C terminal sensor domain BED33_RS14945 PF08220 DeoR-like helix-turn-helix domain BED33_RS14955 PF00596 Class II Aldolase and Adducin N-terminal domain BED33_RS14960 PF05433 Glycine zipper 2TM domain BED33_RS14965 PF01253 Translation initiation factor SUI1 BED33_RS14970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BED33_RS14975 PF07338 Protein of unknown function (DUF1471) BED33_RS14980 PF03594 Benzoate membrane transport protein BED33_RS14985 PF01381 Helix-turn-helix BED33_RS14985 PF07883 Cupin domain BED33_RS14995 PF18073 Rubredoxin metal binding domain BED33_RS15000 PF06305 Lipopolysaccharide assembly protein A domain BED33_RS15005 PF01569 PAP2 superfamily BED33_RS15010 PF00925 GTP cyclohydrolase II BED33_RS15015 PF00330 Aconitase family (aconitate hydratase) BED33_RS15015 PF00694 Aconitase C-terminal domain BED33_RS15025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS15025 PF03466 LysR substrate binding domain BED33_RS15030 PF01131 DNA topoisomerase BED33_RS15030 PF01751 Toprim domain BED33_RS15030 PF08272 Topoisomerase I zinc-ribbon-like BED33_RS15030 PF01396 Topoisomerase DNA binding C4 zinc finger BED33_RS15035 PF10692 Protein of unknown function (DUF2498) BED33_RS15040 PF08496 Peptidase family S49 N-terminal BED33_RS15040 PF01343 Peptidase family S49 BED33_RS15045 PF00106 short chain dehydrogenase BED33_RS15050 PF12557 Cob(I)alamin adenosyltransferase N terminal BED33_RS15050 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP BED33_RS15060 PF00849 RNA pseudouridylate synthase BED33_RS15060 PF01479 S4 domain BED33_RS15065 PF01300 Telomere recombination BED33_RS15070 PF02811 PHP domain BED33_RS15075 PF00425 chorismate binding enzyme BED33_RS15075 PF04715 Anthranilate synthase component I, N terminal region BED33_RS15080 PF00117 Glutamine amidotransferase class-I BED33_RS15085 PF02885 Glycosyl transferase family, helical bundle domain BED33_RS15085 PF00591 Glycosyl transferase family, a/b domain BED33_RS15090 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BED33_RS15090 PF00218 Indole-3-glycerol phosphate synthase BED33_RS15095 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS15100 PF00290 Tryptophan synthase alpha chain BED33_RS15110 PF03922 OmpW family BED33_RS15115 PF03692 Putative zinc- or iron-chelating domain BED33_RS15130 PF04279 Intracellular septation protein A BED33_RS15135 PF03061 Thioesterase superfamily BED33_RS15140 PF03544 Gram-negative bacterial TonB protein C-terminal BED33_RS15145 PF03795 YCII-related domain BED33_RS15160 PF13396 Phospholipase_D-nuclease N-terminal BED33_RS15160 PF13091 PLD-like domain BED33_RS15165 PF04269 Protein of unknown function, DUF440 BED33_RS15170 PF00005 ABC transporter BED33_RS15170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS15175 PF00005 ABC transporter BED33_RS15175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS15180 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS15180 PF12911 N-terminal TM domain of oligopeptide transport permease C BED33_RS15185 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS15190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS15195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS15200 PF01914 MarC family integral membrane protein BED33_RS15205 PF00465 Iron-containing alcohol dehydrogenase BED33_RS15205 PF00171 Aldehyde dehydrogenase family BED33_RS15210 PF00265 Thymidine kinase BED33_RS15220 PF00816 H-NS histone family BED33_RS15225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BED33_RS15225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BED33_RS15225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BED33_RS15230 PF00072 Response regulator receiver domain BED33_RS15235 PF01734 Patatin-like phospholipase BED33_RS15245 PF02810 SEC-C motif BED33_RS15250 PF00551 Formyl transferase BED33_RS15250 PF01842 ACT domain BED33_RS15265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS15265 PF03466 LysR substrate binding domain BED33_RS15270 PF03372 Endonuclease/Exonuclease/phosphatase family BED33_RS15275 PF00293 NUDIX domain BED33_RS15280 PF07383 Protein of unknown function (DUF1496) BED33_RS15285 PF01131 DNA topoisomerase BED33_RS15285 PF01751 Toprim domain BED33_RS15290 PF00586 AIR synthase related protein, N-terminal domain BED33_RS15290 PF02769 AIR synthase related protein, C-terminal domain BED33_RS15295 PF00881 Nitroreductase family BED33_RS15300 PF01343 Peptidase family S49 BED33_RS15305 PF00710 Asparaginase, N-terminal BED33_RS15305 PF17763 Glutaminase/Asparaginase C-terminal domain BED33_RS15310 PF00857 Isochorismatase family BED33_RS15325 PF01641 SelR domain BED33_RS15330 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BED33_RS15330 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED33_RS15335 PF01263 Aldose 1-epimerase BED33_RS15340 PF06629 MltA-interacting protein MipA BED33_RS15345 PF06798 PrkA serine protein kinase C-terminal domain BED33_RS15345 PF08298 PrkA AAA domain BED33_RS15350 PF04285 Protein of unknown function (DUF444) BED33_RS15365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS15365 PF03466 LysR substrate binding domain BED33_RS15370 PF02678 Pirin BED33_RS15370 PF05726 Pirin C-terminal cupin domain BED33_RS15375 PF13426 PAS domain BED33_RS15375 PF00563 EAL domain BED33_RS15375 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS15385 PF00842 Alanine racemase, C-terminal domain BED33_RS15385 PF01168 Alanine racemase, N-terminal domain BED33_RS15390 PF01266 FAD dependent oxidoreductase BED33_RS15395 PF04293 SpoVR like protein BED33_RS15400 PF00392 Bacterial regulatory proteins, gntR family BED33_RS15400 PF07840 FadR C-terminal domain BED33_RS15405 PF06450 Bacterial Na+/H+ antiporter B (NhaB) BED33_RS15410 PF02600 Disulfide bond formation protein DsbB BED33_RS15430 PF03932 CutC family BED33_RS15435 PF06185 YecM protein BED33_RS15440 PF03485 Arginyl tRNA synthetase N terminal domain BED33_RS15440 PF00750 tRNA synthetases class I (R) BED33_RS15440 PF05746 DALR anticodon binding domain BED33_RS15450 PF02562 PhoH-like protein BED33_RS15465 PF13994 PgaD-like protein BED33_RS15470 PF00535 Glycosyl transferase family 2 BED33_RS15485 PF00557 Metallopeptidase family M24 BED33_RS15490 PF11575 FhuF 2Fe-2S C-terminal domain BED33_RS15490 PF06276 Ferric iron reductase FhuF-like transporter BED33_RS15495 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BED33_RS15495 PF01411 tRNA synthetases class II (A) BED33_RS15495 PF02272 DHHA1 domain BED33_RS15505 PF03848 Tellurite resistance protein TehB BED33_RS15505 PF09313 Domain of unknown function (DUF1971) BED33_RS15515 PF00578 AhpC/TSA family BED33_RS15520 PF12704 MacB-like periplasmic core domain BED33_RS15520 PF02687 FtsX-like permease family BED33_RS15520 PF00005 ABC transporter BED33_RS15530 PF00005 ABC transporter BED33_RS15530 PF02687 FtsX-like permease family BED33_RS15530 PF12704 MacB-like periplasmic core domain BED33_RS15540 PF10634 Fe2+ transport protein BED33_RS15545 PF03239 Iron permease FTR1 family BED33_RS15560 PF04960 Glutaminase BED33_RS15565 PF01261 Xylose isomerase-like TIM barrel BED33_RS15570 PF00596 Class II Aldolase and Adducin N-terminal domain BED33_RS15575 PF07005 Sugar-binding N-terminal domain BED33_RS15575 PF17042 Nucleotide-binding C-terminal domain BED33_RS15580 PF00455 DeoR C terminal sensor domain BED33_RS15580 PF08220 DeoR-like helix-turn-helix domain BED33_RS15585 PF00989 PAS fold BED33_RS15585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS15585 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BED33_RS15585 PF17203 Single cache domain 3 BED33_RS15590 PF00072 Response regulator receiver domain BED33_RS15595 PF03390 2-hydroxycarboxylate transporter family BED33_RS15600 PF00324 Amino acid permease BED33_RS15615 PF07690 Major Facilitator Superfamily BED33_RS15630 PF00872 Transposase, Mutator family BED33_RS15635 PF08242 Methyltransferase domain BED33_RS15640 PF00872 Transposase, Mutator family BED33_RS15685 PF00589 Phage integrase family BED33_RS15685 PF02899 Phage integrase, N-terminal SAM-like domain BED33_RS15690 PF10709 Protein of unknown function (DUF2511) BED33_RS15695 PF05425 Copper resistance protein D BED33_RS15700 PF04234 CopC domain BED33_RS15705 PF00210 Ferritin-like domain BED33_RS15710 PF06440 DNA polymerase III, theta subunit BED33_RS15715 PF00561 alpha/beta hydrolase fold BED33_RS15720 PF00929 Exonuclease BED33_RS15725 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain BED33_RS15725 PF00326 Prolyl oligopeptidase family BED33_RS15730 PF13995 YebF-like protein BED33_RS15735 PF04266 ASCH domain BED33_RS15740 PF07130 YebG protein BED33_RS15745 PF03880 DbpA RNA binding domain BED33_RS15745 PF00270 DEAD/DEAH box helicase BED33_RS15745 PF00271 Helicase conserved C-terminal domain BED33_RS15750 PF02222 ATP-grasp domain BED33_RS15755 PF03701 Uncharacterised protein family (UPF0181) BED33_RS15760 PF04715 Anthranilate synthase component I, N terminal region BED33_RS15760 PF00425 chorismate binding enzyme BED33_RS15765 PF00293 NUDIX domain BED33_RS15770 PF03313 Serine dehydratase alpha chain BED33_RS15770 PF03315 Serine dehydratase beta chain BED33_RS15775 PF02371 Transposase IS116/IS110/IS902 family BED33_RS15775 PF01548 Transposase BED33_RS15780 PF03741 Integral membrane protein TerC family BED33_RS15780 PF03471 Transporter associated domain BED33_RS15785 PF03830 PTS system sorbose subfamily IIB component BED33_RS15785 PF03610 PTS system fructose IIA component BED33_RS15790 PF03609 PTS system sorbose-specific iic component BED33_RS15795 PF03613 PTS system mannose/fructose/sorbose family IID component BED33_RS15800 PF06173 Protein of unknown function (DUF986) BED33_RS15805 PF02659 Putative manganese efflux pump BED33_RS15810 PF07715 TonB-dependent Receptor Plug Domain BED33_RS15810 PF00593 TonB dependent receptor BED33_RS15815 PF13426 PAS domain BED33_RS15815 PF08448 PAS fold BED33_RS15815 PF05231 MASE1 BED33_RS15815 PF08447 PAS fold BED33_RS15815 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS15815 PF00563 EAL domain BED33_RS15825 PF13847 Methyltransferase domain BED33_RS15830 PF03717 Penicillin-binding Protein dimerisation domain BED33_RS15830 PF00905 Penicillin binding protein transpeptidase domain BED33_RS15835 PF02578 Multi-copper polyphenol oxidoreductase laccase BED33_RS15840 PF00313 'Cold-shock' DNA-binding domain BED33_RS15845 PF10736 Protein of unknown function (DUF2627) BED33_RS15850 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP BED33_RS15870 PF13974 YebO-like protein BED33_RS15875 PF13996 YobH-like protein BED33_RS15880 PF10964 Protein of unknown function (DUF2766) BED33_RS15885 PF12833 Helix-turn-helix domain BED33_RS15895 PF13520 Amino acid permease BED33_RS15905 PF00664 ABC transporter transmembrane region BED33_RS15905 PF00005 ABC transporter BED33_RS15915 PF03372 Endonuclease/Exonuclease/phosphatase family BED33_RS15925 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS15925 PF01590 GAF domain BED33_RS15925 PF00360 Phytochrome region BED33_RS15925 PF00563 EAL domain BED33_RS15935 PF06411 HdeA/HdeB family BED33_RS15940 PF07007 Lysozyme inhibitor LprI BED33_RS15950 PF00892 EamA-like transporter family BED33_RS15965 PF01638 HxlR-like helix-turn-helix BED33_RS15970 PF05368 NmrA-like family BED33_RS15975 PF01053 Cys/Met metabolism PLP-dependent enzyme BED33_RS15985 PF00717 Peptidase S24-like BED33_RS15990 PF11799 impB/mucB/samB family C-terminal domain BED33_RS15990 PF00817 impB/mucB/samB family BED33_RS15990 PF13438 Domain of unknown function (DUF4113) BED33_RS15995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS15995 PF08447 PAS fold BED33_RS16005 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED33_RS16005 PF00356 Bacterial regulatory proteins, lacI family BED33_RS16010 PF08244 Glycosyl hydrolases family 32 C terminal BED33_RS16010 PF00251 Glycosyl hydrolases family 32 N-terminal domain BED33_RS16015 PF01306 LacY proton/sugar symporter BED33_RS16030 PF00180 Isocitrate/isopropylmalate dehydrogenase BED33_RS16060 PF00180 Isocitrate/isopropylmalate dehydrogenase BED33_RS16065 PF00849 RNA pseudouridylate synthase BED33_RS16070 PF00293 NUDIX domain BED33_RS16080 PF04356 Protein of unknown function (DUF489) BED33_RS16085 PF00206 Lyase BED33_RS16085 PF08328 Adenylosuccinate lyase C-terminal BED33_RS16095 PF00072 Response regulator receiver domain BED33_RS16095 PF00486 Transcriptional regulatory protein, C terminal BED33_RS16100 PF08918 PhoQ Sensor BED33_RS16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS16110 PF07687 Peptidase dimerisation domain BED33_RS16110 PF01546 Peptidase family M20/M25/M40 BED33_RS16115 PF02146 Sir2 family BED33_RS16125 PF12704 MacB-like periplasmic core domain BED33_RS16125 PF02687 FtsX-like permease family BED33_RS16130 PF00005 ABC transporter BED33_RS16135 PF12704 MacB-like periplasmic core domain BED33_RS16135 PF02687 FtsX-like permease family BED33_RS16140 PF00271 Helicase conserved C-terminal domain BED33_RS16140 PF00270 DEAD/DEAH box helicase BED33_RS16140 PF03461 TRCF domain BED33_RS16140 PF17757 UvrB interaction domain BED33_RS16140 PF02559 CarD-like/TRCF domain BED33_RS16145 PF05433 Glycine zipper 2TM domain BED33_RS16150 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS16155 PF05728 Uncharacterised protein family (UPF0227) BED33_RS16160 PF00933 Glycosyl hydrolase family 3 N terminal domain BED33_RS16165 PF01636 Phosphotransferase enzyme family BED33_RS16170 PF08139 Prokaryotic membrane lipoprotein lipid attachment site BED33_RS16170 PF13036 Peptidoglycan-synthase activator LpoB BED33_RS16175 PF07233 Protein of unknown function (DUF1425) BED33_RS16180 PF01230 HIT domain BED33_RS16185 PF08501 Shikimate dehydrogenase substrate binding domain BED33_RS16190 PF12793 Sugar transport-related sRNA regulator N-term BED33_RS16190 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS16195 PF04055 Radical SAM superfamily BED33_RS16195 PF13186 Iron-sulfur cluster-binding domain BED33_RS16205 PF00664 ABC transporter transmembrane region BED33_RS16205 PF00005 ABC transporter BED33_RS16205 PF03412 Peptidase C39 family BED33_RS16215 PF02378 Phosphotransferase system, EIIC BED33_RS16215 PF00367 phosphotransferase system, EIIB BED33_RS16220 PF01026 TatD related DNase BED33_RS16225 PF09115 DNA polymerase III, delta subunit, C terminal BED33_RS16230 PF02223 Thymidylate kinase BED33_RS16235 PF02618 YceG-like family BED33_RS16240 PF01063 Amino-transferase class IV BED33_RS16245 PF02801 Beta-ketoacyl synthase, C-terminal domain BED33_RS16245 PF00109 Beta-ketoacyl synthase, N-terminal domain BED33_RS16250 PF00550 Phosphopantetheine attachment site BED33_RS16260 PF00698 Acyl transferase domain BED33_RS16265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BED33_RS16265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BED33_RS16270 PF02504 Fatty acid synthesis protein BED33_RS16275 PF01783 Ribosomal L32p protein family BED33_RS16280 PF02620 Large ribosomal RNA subunit accumulation protein YceD BED33_RS16285 PF02545 Maf-like protein BED33_RS16290 PF00849 RNA pseudouridylate synthase BED33_RS16290 PF01479 S4 domain BED33_RS16295 PF00575 S1 RNA binding domain BED33_RS16295 PF12111 Polyribonucleotide phosphorylase C terminal BED33_RS16295 PF10150 Ribonuclease E/G family BED33_RS16300 PF03992 Antibiotic biosynthesis monooxygenase BED33_RS16305 PF01979 Amidohydrolase family BED33_RS16310 PF06183 DinI-like family BED33_RS16315 PF13991 BssS protein family BED33_RS16320 PF01266 FAD dependent oxidoreductase BED33_RS16325 PF00196 Bacterial regulatory proteins, luxR family BED33_RS16330 PF01594 AI-2E family transporter BED33_RS16335 PF12368 Rhodanase C-terminal BED33_RS16335 PF00581 Rhodanese-like domain BED33_RS16335 PF17773 UPF0176 acylphosphatase like domain BED33_RS16345 PF03916 Polysulphide reductase, NrfD BED33_RS16350 PF13247 4Fe-4S dicluster domain BED33_RS16360 PF00072 Response regulator receiver domain BED33_RS16360 PF00196 Bacterial regulatory proteins, luxR family BED33_RS16365 PF03279 Bacterial lipid A biosynthesis acyltransferase BED33_RS16370 PF05785 Rho-activating domain of cytotoxic necrotizing factor BED33_RS16370 PF18807 Tripartite Tc toxins repeat BED33_RS16375 PF07681 DoxX BED33_RS16385 PF07690 Major Facilitator Superfamily BED33_RS16390 PF00854 POT family BED33_RS16395 PF00535 Glycosyl transferase family 2 BED33_RS16400 PF04349 Periplasmic glucan biosynthesis protein, MdoG BED33_RS16405 PF01757 Acyltransferase family BED33_RS16415 PF02371 Transposase IS116/IS110/IS902 family BED33_RS16415 PF01548 Transposase BED33_RS16420 PF03471 Transporter associated domain BED33_RS16420 PF02080 TrkA-C domain BED33_RS16420 PF00999 Sodium/hydrogen exchanger family BED33_RS16430 PF00765 Autoinducer synthase BED33_RS16435 PF03472 Autoinducer binding domain BED33_RS16435 PF00196 Bacterial regulatory proteins, luxR family BED33_RS16450 PF08534 Redoxin BED33_RS16460 PF03916 Polysulphide reductase, NrfD BED33_RS16465 PF13247 4Fe-4S dicluster domain BED33_RS16465 PF00037 4Fe-4S binding domain BED33_RS16470 PF13435 Cytochrome c554 and c-prime BED33_RS16470 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) BED33_RS16475 PF02335 Cytochrome c552 BED33_RS16485 PF04358 DsrC like protein BED33_RS16490 PF00708 Acylphosphatase BED33_RS16505 PF10672 S-adenosylmethionine-dependent methyltransferase BED33_RS16505 PF17785 PUA-like domain BED33_RS16510 PF08755 Hemimethylated DNA-binding protein YccV like BED33_RS16515 PF13380 CoA binding domain BED33_RS16520 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) BED33_RS16525 PF02142 MGS-like domain BED33_RS16530 PF13361 UvrD-like helicase C-terminal domain BED33_RS16530 PF00580 UvrD/REP helicase N-terminal domain BED33_RS16530 PF12462 DNA helicase IV / RNA helicase N terminal BED33_RS16535 PF03733 Inner membrane component domain BED33_RS16540 PF12805 FUSC-like inner membrane protein yccS BED33_RS16545 PF04994 TfoX C-terminal domain BED33_RS16545 PF04993 TfoX N-terminal domain BED33_RS16555 PF01389 OmpA-like transmembrane domain BED33_RS16555 PF00691 OmpA family BED33_RS16560 PF17414 MatP C-terminal ribbon-helix-helix domain BED33_RS16560 PF06303 MatP N-terminal domain BED33_RS16565 PF05362 Lon protease (S16) C-terminal proteolytic domain BED33_RS16565 PF13654 AAA domain BED33_RS16570 PF07977 FabA-like domain BED33_RS16580 PF02801 Beta-ketoacyl synthase, C-terminal domain BED33_RS16580 PF00109 Beta-ketoacyl synthase, N-terminal domain BED33_RS16585 PF03886 ABC-type transport auxiliary lipoprotein component BED33_RS16590 PF02470 MlaD protein BED33_RS16595 PF04403 Paraquat-inducible protein A BED33_RS16600 PF12848 ABC transporter BED33_RS16600 PF16326 ABC transporter C-terminal domain BED33_RS16600 PF00005 ABC transporter BED33_RS16605 PF01170 Putative RNA methylase family UPF0020 BED33_RS16605 PF10672 S-adenosylmethionine-dependent methyltransferase BED33_RS16605 PF02926 THUMP domain BED33_RS16610 PF00111 2Fe-2S iron-sulfur cluster binding domain BED33_RS16610 PF03473 MOSC domain BED33_RS16610 PF03476 MOSC N-terminal beta barrel domain BED33_RS16615 PF07126 Cell-division protein ZapC BED33_RS16620 PF01180 Dihydroorotate dehydrogenase BED33_RS16625 PF17432 Domain of unknown function (DUF3458_C) ARM repeats BED33_RS16625 PF11940 Domain of unknown function (DUF3458) Ig-like fold BED33_RS16625 PF01433 Peptidase family M1 domain BED33_RS16630 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BED33_RS16630 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BED33_RS16635 PF00152 tRNA synthetases class II (D, K and N) BED33_RS16635 PF01336 OB-fold nucleic acid binding domain BED33_RS16640 PF00267 Gram-negative porin BED33_RS16645 PF00155 Aminotransferase class I and II BED33_RS16655 PF00753 Metallo-beta-lactamase superfamily BED33_RS16660 PF05951 Bacterial protein of unknown function (DUF882) BED33_RS16665 PF03734 L,D-transpeptidase catalytic domain BED33_RS16665 PF01471 Putative peptidoglycan binding domain BED33_RS16670 PF04310 MukB N-terminal BED33_RS16670 PF16330 MukB hinge domain BED33_RS16675 PF04288 MukE-like family BED33_RS16680 PF03882 MukF winged-helix domain BED33_RS16680 PF17193 MukF C-terminal domain BED33_RS16680 PF17192 MukF middle domain BED33_RS16685 PF13847 Methyltransferase domain BED33_RS16690 PF02698 DUF218 domain BED33_RS16695 PF01636 Phosphotransferase enzyme family BED33_RS16700 PF02348 Cytidylyltransferase BED33_RS16705 PF03966 Trm112p-like protein BED33_RS16710 PF00313 'Cold-shock' DNA-binding domain BED33_RS16715 PF00313 'Cold-shock' DNA-binding domain BED33_RS16720 PF07063 Domain of unknown function (DUF1338) BED33_RS16725 PF02606 Tetraacyldisaccharide-1-P 4'-kinase BED33_RS16730 PF00005 ABC transporter BED33_RS16730 PF00664 ABC transporter transmembrane region BED33_RS16735 PF00753 Metallo-beta-lactamase superfamily BED33_RS16735 PF03772 Competence protein BED33_RS16740 PF00216 Bacterial DNA-binding protein BED33_RS16745 PF00575 S1 RNA binding domain BED33_RS16750 PF02224 Cytidylate kinase BED33_RS16755 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BED33_RS16760 PF00266 Aminotransferase class-V BED33_RS16765 PF04239 Protein of unknown function (DUF421) BED33_RS16770 PF17763 Glutaminase/Asparaginase C-terminal domain BED33_RS16770 PF00710 Asparaginase, N-terminal BED33_RS16775 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding BED33_RS16775 PF18381 YcaO cyclodehydratase C-terminal domain BED33_RS16780 PF01226 Formate/nitrite transporter BED33_RS16785 PF01228 Glycine radical BED33_RS16785 PF02901 Pyruvate formate lyase-like BED33_RS16790 PF04055 Radical SAM superfamily BED33_RS16795 PF07690 Major Facilitator Superfamily BED33_RS16800 PF00872 Transposase, Mutator family BED33_RS16810 PF01548 Transposase BED33_RS16810 PF02371 Transposase IS116/IS110/IS902 family BED33_RS16815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BED33_RS16815 PF02403 Seryl-tRNA synthetase N-terminal domain BED33_RS16820 PF12002 MgsA AAA+ ATPase C terminal BED33_RS16820 PF16193 AAA C-terminal domain BED33_RS16820 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS16825 PF03548 Outer membrane lipoprotein carrier protein LolA BED33_RS16830 PF13491 4TM region of DNA translocase FtsK/SpoIIIE BED33_RS16830 PF17854 FtsK alpha domain BED33_RS16830 PF09397 Ftsk gamma domain BED33_RS16830 PF01580 FtsK/SpoIIIE family BED33_RS16835 PF01037 Lrp/AsnC ligand binding domain BED33_RS16840 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS16845 PF00664 ABC transporter transmembrane region BED33_RS16845 PF00005 ABC transporter BED33_RS16850 PF00664 ABC transporter transmembrane region BED33_RS16850 PF00005 ABC transporter BED33_RS16855 PF03588 Leucyl/phenylalanyl-tRNA protein transferase BED33_RS16860 PF01176 Translation initiation factor 1A / IF-1 BED33_RS16865 PF07724 AAA domain (Cdc48 subfamily) BED33_RS16865 PF00004 ATPase family associated with various cellular activities (AAA) BED33_RS16865 PF10431 C-terminal, D2-small domain, of ClpB protein BED33_RS16865 PF02861 Clp amino terminal domain, pathogenicity island component BED33_RS16865 PF17871 AAA lid domain BED33_RS16870 PF02617 ATP-dependent Clp protease adaptor protein ClpS BED33_RS16875 PF00313 'Cold-shock' DNA-binding domain BED33_RS16880 PF12704 MacB-like periplasmic core domain BED33_RS16880 PF00005 ABC transporter BED33_RS16880 PF02687 FtsX-like permease family BED33_RS16885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS16890 PF04393 Protein of unknown function (DUF535) BED33_RS16895 PF11398 Protein of unknown function (DUF2813) BED33_RS16900 PF03956 Lysine exporter LysO BED33_RS16905 PF03063 Prismane/CO dehydrogenase family BED33_RS16910 PF00111 2Fe-2S iron-sulfur cluster binding domain BED33_RS16910 PF00175 Oxidoreductase NAD-binding domain BED33_RS16910 PF00970 Oxidoreductase FAD-binding domain BED33_RS16915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS16915 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS16915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS16920 PF04072 Leucine carboxyl methyltransferase BED33_RS16925 PF01212 Beta-eliminating lyase BED33_RS16930 PF11066 Protein of unknown function (DUF2867) BED33_RS16930 PF13460 NAD(P)H-binding BED33_RS16935 PF01370 NAD dependent epimerase/dehydratase family BED33_RS16940 PF12883 Protein of unknown function (DUF3828) BED33_RS16945 PF00005 ABC transporter BED33_RS16950 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS16955 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS16960 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS16965 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS16970 PF05958 tRNA (Uracil-5-)-methyltransferase BED33_RS16975 PF10767 Protein of unknown function (DUF2593) BED33_RS16980 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS16985 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS16990 PF08402 TOBE domain BED33_RS16990 PF00005 ABC transporter BED33_RS16995 PF13416 Bacterial extracellular solute-binding protein BED33_RS17000 PF10722 Putative bacterial sensory transduction regulator BED33_RS17005 PF07214 Protein of unknown function (DUF1418) BED33_RS17010 PF00462 Glutaredoxin BED33_RS17015 PF02080 TrkA-C domain BED33_RS17015 PF06826 Predicted Permease Membrane Region BED33_RS17025 PF01569 PAP2 superfamily BED33_RS17030 PF01791 DeoC/LacD family aldolase BED33_RS17035 PF00455 DeoR C terminal sensor domain BED33_RS17035 PF08220 DeoR-like helix-turn-helix domain BED33_RS17045 PF03313 Serine dehydratase alpha chain BED33_RS17045 PF03315 Serine dehydratase beta chain BED33_RS17050 PF02371 Transposase IS116/IS110/IS902 family BED33_RS17050 PF01548 Transposase BED33_RS17055 PF07943 Penicillin-binding protein 5, C-terminal domain BED33_RS17055 PF00768 D-alanyl-D-alanine carboxypeptidase BED33_RS17060 PF00571 CBS domain BED33_RS17060 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS17065 PF01053 Cys/Met metabolism PLP-dependent enzyme BED33_RS17070 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS17075 PF09383 NIL domain BED33_RS17075 PF00005 ABC transporter BED33_RS17080 PF03180 NLPA lipoprotein BED33_RS17095 PF13417 Glutathione S-transferase, N-terminal domain BED33_RS17095 PF00043 Glutathione S-transferase, C-terminal domain BED33_RS17100 PF00593 TonB dependent receptor BED33_RS17100 PF07715 TonB-dependent Receptor Plug Domain BED33_RS17105 PF00005 ABC transporter BED33_RS17110 PF01032 FecCD transport family BED33_RS17115 PF00324 Amino acid permease BED33_RS17120 PF03466 LysR substrate binding domain BED33_RS17120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS17135 PF03601 Conserved hypothetical protein 698 BED33_RS17140 PF01261 Xylose isomerase-like TIM barrel BED33_RS17145 PF13953 PapC C-terminal domain BED33_RS17145 PF00577 Outer membrane usher protein BED33_RS17145 PF13954 PapC N-terminal domain BED33_RS17150 PF02753 Pili assembly chaperone PapD, C-terminal domain BED33_RS17150 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain BED33_RS17160 PF17550 Family of unknown function BED33_RS17165 PF00486 Transcriptional regulatory protein, C terminal BED33_RS17170 PF02378 Phosphotransferase system, EIIC BED33_RS17170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED33_RS17175 PF00294 pfkB family carbohydrate kinase BED33_RS17180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED33_RS17180 PF00381 PTS HPr component phosphorylation site BED33_RS17185 PF13344 Haloacid dehalogenase-like hydrolase BED33_RS17185 PF00293 NUDIX domain BED33_RS17190 PF03264 NapC/NirT cytochrome c family, N-terminal region BED33_RS17195 PF18364 Molybdopterin oxidoreductase N-terminal domain BED33_RS17195 PF01568 Molydopterin dinucleotide binding domain BED33_RS17195 PF00384 Molybdopterin oxidoreductase BED33_RS17200 PF03692 Putative zinc- or iron-chelating domain BED33_RS17205 PF03222 Tryptophan/tyrosine permease family BED33_RS17210 PF01132 Elongation factor P (EF-P) OB domain BED33_RS17210 PF09285 Elongation factor P, C-terminal BED33_RS17210 PF08207 Elongation factor P (EF-P) KOW-like domain BED33_RS17215 PF03786 D-mannonate dehydratase (UxuA) BED33_RS17225 PF01232 Mannitol dehydrogenase Rossmann domain BED33_RS17225 PF08125 Mannitol dehydrogenase C-terminal domain BED33_RS17230 PF00392 Bacterial regulatory proteins, gntR family BED33_RS17230 PF07729 FCD domain BED33_RS17240 PF02492 CobW/HypB/UreG, nucleotide-binding domain BED33_RS17240 PF07683 Cobalamin synthesis protein cobW C-terminal domain BED33_RS17245 PF01569 PAP2 superfamily BED33_RS17250 PF00877 NlpC/P60 family BED33_RS17260 PF00563 EAL domain BED33_RS17260 PF12792 CSS motif domain associated with EAL BED33_RS17265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS17270 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS17275 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS17275 PF12911 N-terminal TM domain of oligopeptide transport permease C BED33_RS17280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BED33_RS17280 PF00005 ABC transporter BED33_RS17285 PF13989 YejG-like protein BED33_RS17290 PF07690 Major Facilitator Superfamily BED33_RS17295 PF00849 RNA pseudouridylate synthase BED33_RS17295 PF01479 S4 domain BED33_RS17300 PF00271 Helicase conserved C-terminal domain BED33_RS17300 PF04851 Type III restriction enzyme, res subunit BED33_RS17305 PF01386 Ribosomal L25p family BED33_RS17310 PF04245 37-kD nucleoid-associated bacterial protein BED33_RS17315 PF07208 Protein of unknown function (DUF1414) BED33_RS17320 PF11893 Domain of unknown function (DUF3413) BED33_RS17320 PF00884 Sulfatase BED33_RS17340 PF00872 Transposase, Mutator family BED33_RS17350 PF01527 Transposase BED33_RS17370 PF00194 Eukaryotic-type carbonic anhydrase BED33_RS17375 PF00232 Glycosyl hydrolase family 1 BED33_RS17380 PF02378 Phosphotransferase system, EIIC BED33_RS17380 PF00367 phosphotransferase system, EIIB BED33_RS17380 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BED33_RS17385 PF01380 SIS domain BED33_RS17385 PF01418 Helix-turn-helix domain, rpiR family BED33_RS17405 PF06530 Phage antitermination protein Q BED33_RS17415 PF06183 DinI-like family BED33_RS17420 PF01278 Omptin family BED33_RS17425 PF02743 Cache domain BED33_RS17425 PF00672 HAMP domain BED33_RS17425 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BED33_RS17430 PF12706 Beta-lactamase superfamily domain BED33_RS17440 PF00144 Beta-lactamase BED33_RS17455 PF00267 Gram-negative porin BED33_RS17470 PF07690 Major Facilitator Superfamily BED33_RS17475 PF16359 RcsD-ABL domain BED33_RS17475 PF01627 Hpt domain BED33_RS17475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS17480 PF00196 Bacterial regulatory proteins, luxR family BED33_RS17480 PF00072 Response regulator receiver domain BED33_RS17485 PF00072 Response regulator receiver domain BED33_RS17485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS17485 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS17485 PF09456 RcsC Alpha-Beta-Loop (ABL) BED33_RS17490 PF03989 DNA gyrase C-terminal domain, beta-propeller BED33_RS17490 PF00521 DNA gyrase/topoisomerase IV, subunit A BED33_RS17500 PF03477 ATP cone domain BED33_RS17500 PF00317 Ribonucleotide reductase, all-alpha domain BED33_RS17500 PF02867 Ribonucleotide reductase, barrel domain BED33_RS17505 PF00268 Ribonucleotide reductase, small chain BED33_RS17515 PF03974 Ecotin BED33_RS17530 PF00994 Probable molybdopterin binding domain BED33_RS17535 PF03222 Tryptophan/tyrosine permease family BED33_RS17540 PF07437 YfaZ precursor BED33_RS17545 PF06628 Catalase-related immune-responsive BED33_RS17545 PF00199 Catalase BED33_RS17550 PF00501 AMP-binding enzyme BED33_RS17550 PF13193 AMP-binding enzyme C-terminal domain BED33_RS17555 PF13378 Enolase C-terminal domain-like BED33_RS17560 PF00378 Enoyl-CoA hydratase/isomerase BED33_RS17565 PF12697 Alpha/beta hydrolase family BED33_RS17570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS17570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS17570 PF16582 Middle domain of thiamine pyrophosphate BED33_RS17575 PF00425 chorismate binding enzyme BED33_RS17580 PF05957 Bacterial protein of unknown function (DUF883) BED33_RS17585 PF00920 Dehydratase family BED33_RS17590 PF03928 Haem-degrading BED33_RS17595 PF07690 Major Facilitator Superfamily BED33_RS17600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_RS17600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED33_RS17605 PF00356 Bacterial regulatory proteins, lacI family BED33_RS17610 PF00106 short chain dehydrogenase BED33_RS17615 PF01202 Shikimate kinase BED33_RS17625 PF06496 Protein of unknown function (DUF1097) BED33_RS17635 PF00361 Proton-conducting membrane transporter BED33_RS17640 PF00361 Proton-conducting membrane transporter BED33_RS17645 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BED33_RS17645 PF00361 Proton-conducting membrane transporter BED33_RS17650 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BED33_RS17655 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 BED33_RS17660 PF12838 4Fe-4S dicluster domain BED33_RS17665 PF00146 NADH dehydrogenase BED33_RS17670 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS17670 PF00384 Molybdopterin oxidoreductase BED33_RS17670 PF01568 Molydopterin dinucleotide binding domain BED33_RS17670 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BED33_RS17675 PF10531 SLBB domain BED33_RS17675 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit BED33_RS17675 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BED33_RS17685 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit BED33_RS17685 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit BED33_RS17690 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit BED33_RS17695 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 BED33_RS17700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS17700 PF03466 LysR substrate binding domain BED33_RS17705 PF00155 Aminotransferase class I and II BED33_RS17715 PF02080 TrkA-C domain BED33_RS17715 PF03600 Citrate transporter BED33_RS17725 PF13419 Haloacid dehalogenase-like hydrolase BED33_RS17730 PF03887 YfbU domain BED33_RS17735 PF04217 Protein of unknown function, DUF412 BED33_RS17740 PF00871 Acetokinase family BED33_RS17745 PF07085 DRTGG domain BED33_RS17745 PF01515 Phosphate acetyl/butaryl transferase BED33_RS17750 PF00356 Bacterial regulatory proteins, lacI family BED33_RS17750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED33_RS17755 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BED33_RS17765 PF03611 PTS system sugar-specific permease component BED33_RS17770 PF02371 Transposase IS116/IS110/IS902 family BED33_RS17770 PF01548 Transposase BED33_RS17775 PF00293 NUDIX domain BED33_RS17790 PF08338 Domain of unknown function (DUF1731) BED33_RS17790 PF01370 NAD dependent epimerase/dehydratase family BED33_RS17800 PF00005 ABC transporter BED33_RS17805 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS17810 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS17815 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS17820 PF02441 Flavoprotein BED33_RS17825 PF00156 Phosphoribosyl transferase domain BED33_RS17830 PF02674 Colicin V production protein BED33_RS17835 PF05036 Sporulation related domain BED33_RS17840 PF02875 Mur ligase family, glutamate ligase domain BED33_RS17840 PF08245 Mur ligase middle domain BED33_RS17845 PF01039 Carboxyl transferase domain BED33_RS17845 PF17848 Acetyl-coA carboxylase zinc finger domain BED33_RS17850 PF09335 SNARE associated Golgi protein BED33_RS17855 PF01416 tRNA pseudouridine synthase BED33_RS17860 PF02774 Semialdehyde dehydrogenase, dimerisation domain BED33_RS17860 PF01118 Semialdehyde dehydrogenase, NAD binding domain BED33_RS17865 PF11890 Domain of unknown function (DUF3410) BED33_RS17865 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BED33_RS17865 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BED33_RS17880 PF00892 EamA-like transporter family BED33_RS17885 PF00155 Aminotransferase class I and II BED33_RS17890 PF00578 AhpC/TSA family BED33_RS17900 PF11412 Disulphide bond corrector protein DsbC BED33_RS17900 PF02683 Cytochrome C biogenesis protein transmembrane region BED33_RS17915 PF03600 Citrate transporter BED33_RS17920 PF00328 Histidine phosphatase superfamily (branch 2) BED33_RS17925 PF00356 Bacterial regulatory proteins, lacI family BED33_RS17930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED33_RS17935 PF02378 Phosphotransferase system, EIIC BED33_RS17940 PF00232 Glycosyl hydrolase family 1 BED33_RS17945 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BED33_RS17955 PF01177 Asp/Glu/Hydantoin racemase BED33_RS17965 PF02801 Beta-ketoacyl synthase, C-terminal domain BED33_RS17965 PF00109 Beta-ketoacyl synthase, N-terminal domain BED33_RS17970 PF01266 FAD dependent oxidoreductase BED33_RS17970 PF05430 S-adenosyl-L-methionine-dependent methyltransferase BED33_RS17975 PF08891 YfcL protein BED33_RS17980 PF04315 Elongation factor P hydroxylase BED33_RS17985 PF01925 Sulfite exporter TauE/SafE BED33_RS17990 PF03411 Penicillin-insensitive murein endopeptidase BED33_RS17995 PF01264 Chorismate synthase BED33_RS18000 PF05175 Methyltransferase small domain BED33_RS18005 PF01713 Smr domain BED33_RS18010 PF00300 Histidine phosphatase superfamily (branch 1) BED33_RS18015 PF00378 Enoyl-CoA hydratase/isomerase BED33_RS18015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BED33_RS18015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BED33_RS18020 PF00108 Thiolase, N-terminal domain BED33_RS18020 PF02803 Thiolase, C-terminal domain BED33_RS18025 PF04175 Protein of unknown function (DUF406) BED33_RS18030 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) BED33_RS18035 PF04333 MlaA lipoprotein BED33_RS18040 PF03918 Cytochrome C biogenesis protein BED33_RS18045 PF03918 Cytochrome C biogenesis protein BED33_RS18050 PF08534 Redoxin BED33_RS18055 PF01578 Cytochrome C assembly protein BED33_RS18055 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal BED33_RS18060 PF03100 CcmE BED33_RS18065 PF04995 Heme exporter protein D (CcmD) BED33_RS18070 PF01578 Cytochrome C assembly protein BED33_RS18075 PF03379 CcmB protein BED33_RS18080 PF00005 ABC transporter BED33_RS18085 PF02371 Transposase IS116/IS110/IS902 family BED33_RS18085 PF01548 Transposase BED33_RS18090 PF01226 Formate/nitrite transporter BED33_RS18100 PF00589 Phage integrase family BED33_RS18100 PF14659 Phage integrase, N-terminal SAM-like domain BED33_RS18100 PF13356 Arm DNA-binding domain BED33_RS18160 PF03831 PhnA domain BED33_RS18160 PF08274 PhnA Zinc-Ribbon BED33_RS18165 PF03551 Transcriptional regulator PadR-like family BED33_RS18175 PF00232 Glycosyl hydrolase family 1 BED33_RS18180 PF00367 phosphotransferase system, EIIB BED33_RS18180 PF02378 Phosphotransferase system, EIIC BED33_RS18185 PF00356 Bacterial regulatory proteins, lacI family BED33_RS18190 PF04264 YceI-like domain BED33_RS18195 PF01292 Prokaryotic cytochrome b561 BED33_RS18200 PF07859 alpha/beta hydrolase fold BED33_RS18200 PF13472 GDSL-like Lipase/Acylhydrolase family BED33_RS18220 PF00005 ABC transporter BED33_RS18225 PF02405 Permease MlaE BED33_RS18230 PF07690 Major Facilitator Superfamily BED33_RS18240 PF07969 Amidohydrolase family BED33_RS18245 PF00324 Amino acid permease BED33_RS18250 PF13406 Transglycosylase SLT domain BED33_RS18260 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS18265 PF00005 ABC transporter BED33_RS18285 PF01292 Prokaryotic cytochrome b561 BED33_RS18290 PF00155 Aminotransferase class I and II BED33_RS18300 PF07350 Protein of unknown function (DUF1479) BED33_RS18310 PF04397 LytTr DNA-binding domain BED33_RS18310 PF00072 Response regulator receiver domain BED33_RS18320 PF02685 Glucokinase BED33_RS18330 PF03466 LysR substrate binding domain BED33_RS18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS18335 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS18335 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS18335 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS18340 PF00248 Aldo/keto reductase family BED33_RS18355 PF07662 Na+ dependent nucleoside transporter C-terminus BED33_RS18355 PF01773 Na+ dependent nucleoside transporter N-terminus BED33_RS18355 PF07670 Nucleoside recognition BED33_RS18385 PF00749 tRNA synthetases class I (E and Q), catalytic domain BED33_RS18410 PF12843 Putative quorum-sensing-regulated virulence factor BED33_RS18415 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BED33_RS18415 PF12826 Helix-hairpin-helix motif BED33_RS18415 PF03120 NAD-dependent DNA ligase OB-fold domain BED33_RS18415 PF00533 BRCA1 C Terminus (BRCT) domain BED33_RS18415 PF01653 NAD-dependent DNA ligase adenylation domain BED33_RS18420 PF04354 ZipA, C-terminal FtsZ-binding domain BED33_RS18430 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS18435 PF00381 PTS HPr component phosphorylation site BED33_RS18440 PF00391 PEP-utilising enzyme, mobile domain BED33_RS18440 PF02896 PEP-utilising enzyme, TIM barrel domain BED33_RS18440 PF05524 PEP-utilising enzyme, N-terminal BED33_RS18445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BED33_RS18450 PF00672 HAMP domain BED33_RS18450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS18450 PF16527 Two-component sensor protein CpxA, periplasmic domain BED33_RS18450 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS18455 PF00486 Transcriptional regulatory protein, C terminal BED33_RS18455 PF00072 Response regulator receiver domain BED33_RS18460 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS18465 PF12704 MacB-like periplasmic core domain BED33_RS18465 PF02687 FtsX-like permease family BED33_RS18465 PF00005 ABC transporter BED33_RS18470 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS18475 PF00005 ABC transporter BED33_RS18480 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS18485 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS18495 PF07690 Major Facilitator Superfamily BED33_RS18500 PF01418 Helix-turn-helix domain, rpiR family BED33_RS18500 PF01380 SIS domain BED33_RS18505 PF04074 YhcH/YjgK/YiaL BED33_RS18510 PF00480 ROK family BED33_RS18515 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase BED33_RS18520 PF00701 Dihydrodipicolinate synthetase family BED33_RS18525 PF02371 Transposase IS116/IS110/IS902 family BED33_RS18525 PF01548 Transposase BED33_RS18530 PF04261 Dyp-type peroxidase family BED33_RS18535 PF06572 Protein of unknown function (DUF1131) BED33_RS18540 PF04076 Bacterial OB fold (BOF) protein BED33_RS18545 PF00583 Acetyltransferase (GNAT) family BED33_RS18550 PF01218 Coproporphyrinogen III oxidase BED33_RS18555 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BED33_RS18565 PF01515 Phosphate acetyl/butaryl transferase BED33_RS18565 PF00390 Malic enzyme, N-terminal domain BED33_RS18565 PF03949 Malic enzyme, NAD binding domain BED33_RS18570 PF00293 NUDIX domain BED33_RS18580 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) BED33_RS18585 PF10518 TAT (twin-arginine translocation) pathway signal sequence BED33_RS18585 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS18585 PF00384 Molybdopterin oxidoreductase BED33_RS18585 PF01568 Molydopterin dinucleotide binding domain BED33_RS18590 PF03927 NapD protein BED33_RS18600 PF00196 Bacterial regulatory proteins, luxR family BED33_RS18600 PF00072 Response regulator receiver domain BED33_RS18610 PF00873 AcrB/AcrD/AcrF family BED33_RS18630 PF03960 ArsC family BED33_RS18635 PF01546 Peptidase family M20/M25/M40 BED33_RS18635 PF07687 Peptidase dimerisation domain BED33_RS18640 PF02557 D-alanyl-D-alanine carboxypeptidase BED33_RS18645 PF13980 Uncharacterised protein family (UPF0370) BED33_RS18660 PF13505 Outer membrane protein beta-barrel domain BED33_RS18675 PF01548 Transposase BED33_RS18675 PF02371 Transposase IS116/IS110/IS902 family BED33_RS18680 PF03245 Bacteriophage Rz lysis protein BED33_RS18685 PF02230 Phospholipase/Carboxylesterase BED33_RS18700 PF13718 GNAT acetyltransferase 2 BED33_RS18700 PF05127 Helicase BED33_RS18700 PF17176 tRNA-binding domain BED33_RS18705 PF04284 Protein of unknown function (DUF441) BED33_RS18710 PF04228 Putative neutral zinc metallopeptidase BED33_RS18715 PF01259 SAICAR synthetase BED33_RS18720 PF06804 NlpB/DapX lipoprotein BED33_RS18725 PF00701 Dihydrodipicolinate synthetase family BED33_RS18730 PF01842 ACT domain BED33_RS18735 PF00578 AhpC/TSA family BED33_RS18740 PF01594 AI-2E family transporter BED33_RS18745 PF01435 Peptidase family M48 BED33_RS18745 PF07720 Tetratricopeptide repeat BED33_RS18750 PF03960 ArsC family BED33_RS18755 PF00308 Bacterial dnaA protein BED33_RS18760 PF00860 Permease family BED33_RS18770 PF02769 AIR synthase related protein, C-terminal domain BED33_RS18770 PF00586 AIR synthase related protein, N-terminal domain BED33_RS18775 PF00551 Formyl transferase BED33_RS18780 PF13302 Acetyltransferase (GNAT) domain BED33_RS18790 PF00005 ABC transporter BED33_RS18795 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS18800 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS18805 PF17941 Polyphosphate kinase C-terminal domain 1 BED33_RS18805 PF13089 Polyphosphate kinase N-terminal domain BED33_RS18805 PF13090 Polyphosphate kinase C-terminal domain 2 BED33_RS18805 PF02503 Polyphosphate kinase middle domain BED33_RS18810 PF02541 Ppx/GppA phosphatase family BED33_RS18825 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS18825 PF05231 MASE1 BED33_RS18825 PF08447 PAS fold BED33_RS18825 PF13426 PAS domain BED33_RS18825 PF08448 PAS fold BED33_RS18825 PF00563 EAL domain BED33_RS18830 PF00012 Hsp70 protein BED33_RS18835 PF13533 Biotin-lipoyl like BED33_RS18840 PF00873 AcrB/AcrD/AcrF family BED33_RS18845 PF00873 AcrB/AcrD/AcrF family BED33_RS18850 PF07690 Major Facilitator Superfamily BED33_RS18855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS18855 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS18855 PF00672 HAMP domain BED33_RS18860 PF00486 Transcriptional regulatory protein, C terminal BED33_RS18860 PF00072 Response regulator receiver domain BED33_RS18865 PF07411 Domain of unknown function (DUF1508) BED33_RS18870 PF16325 Peptidase family U32 C-terminal domain BED33_RS18870 PF01136 Peptidase family U32 BED33_RS18875 PF00781 Diacylglycerol kinase catalytic domain BED33_RS18880 PF03608 PTS system enzyme II sorbitol-specific factor BED33_RS18885 PF07663 Sorbitol phosphotransferase enzyme II C-terminus BED33_RS18885 PF03612 Sorbitol phosphotransferase enzyme II N-terminus BED33_RS18890 PF03829 PTS system glucitol/sorbitol-specific IIA component BED33_RS18895 PF00106 short chain dehydrogenase BED33_RS18900 PF06923 Glucitol operon activator protein (GutM) BED33_RS18905 PF08220 DeoR-like helix-turn-helix domain BED33_RS18905 PF00455 DeoR C terminal sensor domain BED33_RS18910 PF01380 SIS domain BED33_RS18910 PF00571 CBS domain BED33_RS18925 PF08543 Phosphomethylpyrimidine kinase BED33_RS18955 PF00872 Transposase, Mutator family BED33_RS18995 PF02371 Transposase IS116/IS110/IS902 family BED33_RS18995 PF01548 Transposase BED33_RS19000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BED33_RS19000 PF00034 Cytochrome c BED33_RS19020 PF00117 Glutamine amidotransferase class-I BED33_RS19020 PF00958 GMP synthase C terminal domain BED33_RS19020 PF02540 NAD synthase BED33_RS19025 PF00571 CBS domain BED33_RS19025 PF00478 IMP dehydrogenase / GMP reductase domain BED33_RS19030 PF13742 OB-fold nucleic acid binding domain BED33_RS19030 PF02601 Exonuclease VII, large subunit BED33_RS19035 PF07191 zinc-ribbons BED33_RS19045 PF01548 Transposase BED33_RS19045 PF02371 Transposase IS116/IS110/IS902 family BED33_RS19050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BED33_RS19050 PF01926 50S ribosome-binding GTPase BED33_RS19060 PF13360 PQQ-like domain BED33_RS19065 PF09976 Tetratricopeptide repeat-like domain BED33_RS19070 PF03129 Anticodon binding domain BED33_RS19070 PF13393 Histidyl-tRNA synthetase BED33_RS19075 PF04551 GcpE protein BED33_RS19080 PF13464 Domain of unknown function (DUF4115) BED33_RS19090 PF04055 Radical SAM superfamily BED33_RS19095 PF00334 Nucleoside diphosphate kinase BED33_RS19105 PF00905 Penicillin binding protein transpeptidase domain BED33_RS19105 PF00912 Transglycosylase BED33_RS19105 PF06832 Penicillin-Binding Protein C-terminus Family BED33_RS19110 PF11974 Bacterial alpha-2-macroglobulin MG3 domain BED33_RS19110 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain BED33_RS19110 PF00207 Alpha-2-macroglobulin family BED33_RS19110 PF07703 Alpha-2-macroglobulin bait region domain BED33_RS19110 PF07678 A-macroglobulin TED domain BED33_RS19110 PF01835 MG2 domain BED33_RS19110 PF17962 Bacterial macroglobulin domain 6 BED33_RS19110 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain BED33_RS19110 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain BED33_RS19115 PF16168 Adhesin of bacterial autotransporter system, probable stalk BED33_RS19115 PF03797 Autotransporter beta-domain BED33_RS19115 PF03212 Pertactin BED33_RS19120 PF14581 SseB protein C-terminal domain BED33_RS19120 PF07179 SseB protein N-terminal domain BED33_RS19125 PF12404 Peptidase BED33_RS19125 PF00883 Cytosol aminopeptidase family, catalytic domain BED33_RS19130 PF04384 Iron-sulphur cluster assembly BED33_RS19135 PF00111 2Fe-2S iron-sulfur cluster binding domain BED33_RS19140 PF00012 Hsp70 protein BED33_RS19145 PF00226 DnaJ domain BED33_RS19145 PF07743 HSCB C-terminal oligomerisation domain BED33_RS19150 PF01521 Iron-sulphur cluster biosynthesis BED33_RS19155 PF01592 NifU-like N terminal domain BED33_RS19160 PF00266 Aminotransferase class-V BED33_RS19165 PF02082 Transcriptional regulator BED33_RS19170 PF00588 SpoU rRNA Methylase family BED33_RS19175 PF00459 Inositol monophosphatase family BED33_RS19180 PF03824 High-affinity nickel-transport protein BED33_RS19185 PF06226 Protein of unknown function (DUF1007) BED33_RS19195 PF12832 MFS_1 like family BED33_RS19200 PF00464 Serine hydroxymethyltransferase BED33_RS19205 PF00042 Globin BED33_RS19205 PF00175 Oxidoreductase NAD-binding domain BED33_RS19205 PF00970 Oxidoreductase FAD-binding domain BED33_RS19210 PF14502 Helix-turn-helix domain BED33_RS19210 PF14503 YhfZ C-terminal domain BED33_RS19220 PF01168 Alanine racemase, N-terminal domain BED33_RS19225 PF02126 Phosphotriesterase family BED33_RS19230 PF10941 Protein of unknown function DUF2620 BED33_RS19235 PF10797 Protein of unknown function BED33_RS19240 PF00543 Nitrogen regulatory protein P-II BED33_RS19245 PF00795 Carbon-nitrogen hydrolase BED33_RS19245 PF02540 NAD synthase BED33_RS19250 PF00072 Response regulator receiver domain BED33_RS19250 PF00158 Sigma-54 interaction domain BED33_RS19255 PF13942 YfhG lipoprotein BED33_RS19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS19260 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS19270 PF02769 AIR synthase related protein, C-terminal domain BED33_RS19270 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BED33_RS19270 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal BED33_RS19275 PF00497 Bacterial extracellular solute-binding proteins, family 3 BED33_RS19275 PF01464 Transglycosylase SLT domain BED33_RS19280 PF14437 MafB19-like deaminase BED33_RS19295 PF01380 SIS domain BED33_RS19300 PF01418 Helix-turn-helix domain, rpiR family BED33_RS19300 PF01380 SIS domain BED33_RS19305 PF12838 4Fe-4S dicluster domain BED33_RS19315 PF01648 4'-phosphopantetheinyl transferase superfamily BED33_RS19320 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ BED33_RS19325 PF02565 Recombination protein O C terminal BED33_RS19325 PF11967 Recombination protein O N terminal BED33_RS19330 PF01926 50S ribosome-binding GTPase BED33_RS19330 PF07650 KH domain BED33_RS19335 PF14622 Ribonuclease-III-like BED33_RS19335 PF00035 Double-stranded RNA binding motif BED33_RS19340 PF10502 Signal peptidase, peptidase S26 BED33_RS19345 PF06421 GTP-binding protein LepA C-terminus BED33_RS19345 PF03144 Elongation factor Tu domain 2 BED33_RS19345 PF00009 Elongation factor Tu GTP binding domain BED33_RS19345 PF00679 Elongation factor G C-terminus BED33_RS19360 PF03888 MucB/RseB N-terminal domain BED33_RS19360 PF17188 MucB/RseB C-terminal domain BED33_RS19365 PF03873 Anti sigma-E protein RseA, C-terminal domain BED33_RS19365 PF03872 Anti sigma-E protein RseA, N-terminal domain BED33_RS19370 PF04542 Sigma-70 region 2 BED33_RS19370 PF08281 Sigma-70, region 4 BED33_RS19375 PF00890 FAD binding domain BED33_RS19375 PF02910 Fumarate reductase flavoprotein C-term BED33_RS19380 PF05175 Methyltransferase small domain BED33_RS19385 PF00270 DEAD/DEAH box helicase BED33_RS19385 PF00271 Helicase conserved C-terminal domain BED33_RS19390 PF01548 Transposase BED33_RS19390 PF02371 Transposase IS116/IS110/IS902 family BED33_RS19395 PF02371 Transposase IS116/IS110/IS902 family BED33_RS19395 PF01548 Transposase BED33_RS19400 PF12796 Ankyrin repeats (3 copies) BED33_RS19415 PF01228 Glycine radical BED33_RS19420 PF03167 Uracil DNA glycosylase superfamily BED33_RS19425 PF01025 GrpE BED33_RS19430 PF01513 ATP-NAD kinase BED33_RS19435 PF02463 RecF/RecN/SMC N terminal domain BED33_RS19440 PF04355 SmpA / OmlA family BED33_RS19445 PF03658 RnfH family Ubiquitin BED33_RS19450 PF03364 Polyketide cyclase / dehydrase and lipid transport BED33_RS19455 PF01668 SmpB protein BED33_RS19470 PF01740 STAS domain BED33_RS19470 PF00916 Sulfate permease family BED33_RS19475 PF04794 YdjC-like protein BED33_RS19480 PF12833 Helix-turn-helix domain BED33_RS19480 PF07883 Cupin domain BED33_RS19485 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BED33_RS19490 PF00232 Glycosyl hydrolase family 1 BED33_RS19495 PF02378 Phosphotransferase system, EIIC BED33_RS19500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BED33_RS19510 PF01548 Transposase BED33_RS19510 PF02371 Transposase IS116/IS110/IS902 family BED33_RS19515 PF00248 Aldo/keto reductase family BED33_RS19520 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BED33_RS19525 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BED33_RS19530 PF02254 TrkA-N domain BED33_RS19530 PF07885 Ion channel BED33_RS19535 PF06411 HdeA/HdeB family BED33_RS19540 PF03824 High-affinity nickel-transport protein BED33_RS19545 PF03253 Urea transporter BED33_RS19550 PF01774 UreD urease accessory protein BED33_RS19555 PF02492 CobW/HypB/UreG, nucleotide-binding domain BED33_RS19560 PF01730 UreF BED33_RS19565 PF05194 UreE urease accessory protein, C-terminal domain BED33_RS19565 PF02814 UreE urease accessory protein, N-terminal domain BED33_RS19570 PF00449 Urease alpha-subunit, N-terminal domain BED33_RS19570 PF01979 Amidohydrolase family BED33_RS19575 PF00699 Urease beta subunit BED33_RS19580 PF00547 Urease, gamma subunit BED33_RS19585 PF00005 ABC transporter BED33_RS19590 PF00005 ABC transporter BED33_RS19595 PF12911 N-terminal TM domain of oligopeptide transport permease C BED33_RS19595 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS19600 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS19605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS19635 PF00313 'Cold-shock' DNA-binding domain BED33_RS19650 PF09400 Protein of unknown function (DUF2002) BED33_RS19655 PF07690 Major Facilitator Superfamily BED33_RS19660 PF12833 Helix-turn-helix domain BED33_RS19670 PF06392 Acid shock protein repeat BED33_RS19675 PF05957 Bacterial protein of unknown function (DUF883) BED33_RS19685 PF02627 Carboxymuconolactone decarboxylase family BED33_RS19695 PF07972 NrdI Flavodoxin like BED33_RS19700 PF02867 Ribonucleotide reductase, barrel domain BED33_RS19700 PF00317 Ribonucleotide reductase, all-alpha domain BED33_RS19700 PF08343 Ribonucleotide reductase N-terminal BED33_RS19705 PF00268 Ribonucleotide reductase, small chain BED33_RS19710 PF00005 ABC transporter BED33_RS19710 PF00571 CBS domain BED33_RS19715 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS19720 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BED33_RS19730 PF00929 Exonuclease BED33_RS19735 PF00075 RNase H BED33_RS19740 PF08241 Methyltransferase domain BED33_RS19745 PF16123 Hydroxyacylglutathione hydrolase C-terminus BED33_RS19745 PF00753 Metallo-beta-lactamase superfamily BED33_RS19750 PF01476 LysM domain BED33_RS19750 PF01464 Transglycosylase SLT domain BED33_RS19755 PF01548 Transposase BED33_RS19755 PF02371 Transposase IS116/IS110/IS902 family BED33_RS19760 PF03372 Endonuclease/Exonuclease/phosphatase family BED33_RS19765 PF07690 Major Facilitator Superfamily BED33_RS19770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS19770 PF03466 LysR substrate binding domain BED33_RS19775 PF00248 Aldo/keto reductase family BED33_RS19780 PF02801 Beta-ketoacyl synthase, C-terminal domain BED33_RS19780 PF00109 Beta-ketoacyl synthase, N-terminal domain BED33_RS19785 PF00872 Transposase, Mutator family BED33_RS19825 PF00005 ABC transporter BED33_RS19825 PF09383 NIL domain BED33_RS19830 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS19835 PF03180 NLPA lipoprotein BED33_RS19840 PF16358 RcsF lipoprotein BED33_RS19845 PF01980 tRNA-methyltransferase O BED33_RS19845 PF18389 TrmO C-terminal domain BED33_RS19850 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BED33_RS19850 PF03129 Anticodon binding domain BED33_RS19850 PF04073 Aminoacyl-tRNA editing domain BED33_RS19855 PF04170 NlpE N-terminal domain BED33_RS19855 PF17185 NlpE C-terminal OB domain BED33_RS19860 PF00472 RF-1 domain BED33_RS19865 PF07152 YaeQ protein BED33_RS19870 PF06786 Uncharacterised protein family (UPF0253) BED33_RS19875 PF07073 Modulator of Rho-dependent transcription termination (ROF) BED33_RS19880 PF00034 Cytochrome c BED33_RS19885 PF11734 TilS substrate C-terminal domain BED33_RS19885 PF09179 TilS substrate binding domain BED33_RS19885 PF01171 PP-loop family BED33_RS19890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BED33_RS19895 PF01276 Orn/Lys/Arg decarboxylase, major domain BED33_RS19895 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED33_RS19895 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED33_RS19900 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BED33_RS19905 PF01336 OB-fold nucleic acid binding domain BED33_RS19905 PF02811 PHP domain BED33_RS19905 PF07733 Bacterial DNA polymerase III alpha NTPase domain BED33_RS19905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BED33_RS19905 PF14579 Helix-hairpin-helix motif BED33_RS19910 PF01351 Ribonuclease HII BED33_RS19915 PF02684 Lipid-A-disaccharide synthetase BED33_RS19920 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 BED33_RS19920 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS19925 PF07977 FabA-like domain BED33_RS19930 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD BED33_RS19930 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS19935 PF03938 Outer membrane protein (OmpH-like) BED33_RS19940 PF01103 Surface antigen BED33_RS19940 PF07244 Surface antigen variable number repeat BED33_RS19945 PF02163 Peptidase family M50 BED33_RS19945 PF17820 PDZ domain BED33_RS19955 PF01255 Putative undecaprenyl diphosphate synthase BED33_RS19960 PF13288 DXP reductoisomerase C-terminal domain BED33_RS19960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BED33_RS19960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BED33_RS19965 PF01765 Ribosome recycling factor BED33_RS19970 PF00696 Amino acid kinase family BED33_RS19975 PF00889 Elongation factor TS BED33_RS19980 PF00318 Ribosomal protein S2 BED33_RS19990 PF01842 ACT domain BED33_RS19990 PF08335 GlnD PII-uridylyltransferase BED33_RS19990 PF01909 Nucleotidyltransferase domain BED33_RS19990 PF01966 HD domain BED33_RS19995 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal BED33_RS19995 PF14602 Hexapeptide repeat of succinyl-transferase BED33_RS19995 PF00132 Bacterial transferase hexapeptide (six repeats) BED33_RS20000 PF11944 Protein of unknown function (DUF3461) BED33_RS20005 PF00258 Flavodoxin BED33_RS20010 PF00849 RNA pseudouridylate synthase BED33_RS20015 PF04287 tRNA pseudouridine synthase C BED33_RS20020 PF07348 Syd protein (SUKH-2) BED33_RS20025 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term BED33_RS20025 PF14489 QueF-like protein BED33_RS20030 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases BED33_RS20030 PF03641 Possible lysine decarboxylase BED33_RS20030 PF11892 Domain of unknown function (DUF3412) BED33_RS20035 PF01367 5'-3' exonuclease, C-terminal SAM fold BED33_RS20035 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BED33_RS20040 PF02371 Transposase IS116/IS110/IS902 family BED33_RS20040 PF01548 Transposase BED33_RS20045 PF18125 RlmM ferredoxin-like domain BED33_RS20045 PF01728 FtsJ-like methyltransferase BED33_RS20050 PF04241 Protein of unknown function (DUF423) BED33_RS20055 PF03466 LysR substrate binding domain BED33_RS20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS20060 PF06004 Bacterial protein of unknown function (DUF903) BED33_RS20065 PF00266 Aminotransferase class-V BED33_RS20070 PF02657 Fe-S metabolism associated domain BED33_RS20075 PF00899 ThiF family BED33_RS20080 PF03562 MltA specific insert domain BED33_RS20080 PF06725 3D domain BED33_RS20100 PF11741 AMIN domain BED33_RS20100 PF01520 N-acetylmuramoyl-L-alanine amidase BED33_RS20105 PF00583 Acetyltransferase (GNAT) family BED33_RS20105 PF00696 Amino acid kinase family BED33_RS20110 PF13538 UvrD-like helicase C-terminal domain BED33_RS20115 PF13361 UvrD-like helicase C-terminal domain BED33_RS20115 PF12705 PD-(D/E)XK nuclease superfamily BED33_RS20115 PF00580 UvrD/REP helicase N-terminal domain BED33_RS20120 PF00675 Insulinase (Peptidase family M16) BED33_RS20120 PF16187 Middle or third domain of peptidase_M16 BED33_RS20120 PF05193 Peptidase M16 inactive domain BED33_RS20125 PF17946 RecC C-terminal domain BED33_RS20130 PF12528 Type II secretion prepilin peptidase dependent protein C BED33_RS20130 PF07963 Prokaryotic N-terminal methylation motif BED33_RS20145 PF07963 Prokaryotic N-terminal methylation motif BED33_RS20150 PF00303 Thymidylate synthase BED33_RS20155 PF01790 Prolipoprotein diacylglyceryl transferase BED33_RS20160 PF02896 PEP-utilising enzyme, TIM barrel domain BED33_RS20160 PF00391 PEP-utilising enzyme, mobile domain BED33_RS20160 PF05524 PEP-utilising enzyme, N-terminal BED33_RS20160 PF01590 GAF domain BED33_RS20165 PF00293 NUDIX domain BED33_RS20175 PF02976 DNA mismatch repair enzyme MutH BED33_RS20180 PF03741 Integral membrane protein TerC family BED33_RS20185 PF00248 Aldo/keto reductase family BED33_RS20195 PF13193 AMP-binding enzyme C-terminal domain BED33_RS20195 PF01553 Acyltransferase BED33_RS20195 PF00501 AMP-binding enzyme BED33_RS20200 PF00384 Molybdopterin oxidoreductase BED33_RS20200 PF01568 Molydopterin dinucleotide binding domain BED33_RS20205 PF00356 Bacterial regulatory proteins, lacI family BED33_RS20210 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BED33_RS20210 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BED33_RS20215 PF03466 LysR substrate binding domain BED33_RS20215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS20220 PF07690 Major Facilitator Superfamily BED33_RS20225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS20225 PF03466 LysR substrate binding domain BED33_RS20290 PF08334 Type II secretion system (T2SS), protein G BED33_RS20290 PF07963 Prokaryotic N-terminal methylation motif BED33_RS20300 PF00437 Type II/IV secretion system protein BED33_RS20305 PF03958 Bacterial type II/III secretion system short domain BED33_RS20305 PF00263 Bacterial type II and III secretion system protein BED33_RS20320 PF00484 Carbonic anhydrase BED33_RS20325 PF01638 HxlR-like helix-turn-helix BED33_RS20340 PF00226 DnaJ domain BED33_RS20340 PF01556 DnaJ C terminal domain BED33_RS20345 PF02371 Transposase IS116/IS110/IS902 family BED33_RS20345 PF01548 Transposase BED33_RS20350 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS20350 PF08448 PAS fold BED33_RS20355 PF13474 SnoaL-like domain BED33_RS20370 PF00872 Transposase, Mutator family BED33_RS20375 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA BED33_RS20380 PF15723 Motility quorum-sensing regulator, toxin of MqsA BED33_RS20395 PF13592 Winged helix-turn helix BED33_RS20395 PF13358 DDE superfamily endonuclease BED33_RS20400 PF00589 Phage integrase family BED33_RS20440 PF13358 DDE superfamily endonuclease BED33_RS20440 PF13592 Winged helix-turn helix BED33_RS20475 PF00589 Phage integrase family BED33_RS20485 PF01336 OB-fold nucleic acid binding domain BED33_RS20485 PF00152 tRNA synthetases class II (D, K and N) BED33_RS20490 PF00472 RF-1 domain BED33_RS20490 PF03462 PCRF domain BED33_RS20495 PF01368 DHH family BED33_RS20495 PF02272 DHHA1 domain BED33_RS20495 PF17768 RecJ OB domain BED33_RS20500 PF13098 Thioredoxin-like domain BED33_RS20500 PF10411 Disulfide bond isomerase protein N-terminus BED33_RS20505 PF02899 Phage integrase, N-terminal SAM-like domain BED33_RS20505 PF00589 Phage integrase family BED33_RS20510 PF00258 Flavodoxin BED33_RS20515 PF06123 Inner membrane protein CreD BED33_RS20520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS20520 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS20520 PF00672 HAMP domain BED33_RS20525 PF00072 Response regulator receiver domain BED33_RS20525 PF00486 Transcriptional regulatory protein, C terminal BED33_RS20530 PF07254 Membrane-bound toxin component of toxin-antitoxin system BED33_RS20535 PF03937 Flavinator of succinate dehydrogenase BED33_RS20540 PF01571 Aminomethyltransferase folate-binding domain BED33_RS20545 PF01548 Transposase BED33_RS20545 PF02371 Transposase IS116/IS110/IS902 family BED33_RS20550 PF03006 Haemolysin-III related BED33_RS20570 PF02347 Glycine cleavage system P-protein BED33_RS20575 PF01597 Glycine cleavage H-protein BED33_RS20580 PF01571 Aminomethyltransferase folate-binding domain BED33_RS20580 PF08669 Glycine cleavage T-protein C-terminal barrel domain BED33_RS20585 PF01494 FAD binding domain BED33_RS20590 PF01494 FAD binding domain BED33_RS20595 PF05195 Aminopeptidase P, N-terminal domain BED33_RS20595 PF00557 Metallopeptidase family M24 BED33_RS20600 PF03695 Uncharacterised protein family (UPF0149) BED33_RS20605 PF05164 Cell division protein ZapA BED33_RS20615 PF01812 5-formyltetrahydrofolate cyclo-ligase family BED33_RS20620 PF00113 Enolase, C-terminal TIM barrel domain BED33_RS20620 PF03952 Enolase, N-terminal domain BED33_RS20625 PF00117 Glutamine amidotransferase class-I BED33_RS20625 PF06418 CTP synthase N-terminus BED33_RS20630 PF03819 MazG nucleotide pyrophosphohydrolase domain BED33_RS20635 PF04607 Region found in RelA / SpoT proteins BED33_RS20635 PF02824 TGS domain BED33_RS20635 PF13291 ACT domain BED33_RS20640 PF01938 TRAM domain BED33_RS20640 PF05958 tRNA (Uracil-5-)-methyltransferase BED33_RS20645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) BED33_RS20645 PF00672 HAMP domain BED33_RS20645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BED33_RS20645 PF01627 Hpt domain BED33_RS20645 PF00512 His Kinase A (phospho-acceptor) domain BED33_RS20645 PF00072 Response regulator receiver domain BED33_RS20650 PF00595 PDZ domain BED33_RS20655 PF13286 Phosphohydrolase-associated domain BED33_RS20655 PF01966 HD domain BED33_RS20660 PF01048 Phosphorylase superfamily BED33_RS20665 PF01497 Periplasmic binding protein BED33_RS20670 PF03458 UPF0126 domain BED33_RS20675 PF01521 Iron-sulphur cluster biosynthesis BED33_RS20680 PF00654 Voltage gated chloride channel BED33_RS20685 PF00202 Aminotransferase class-III BED33_RS20690 PF07690 Major Facilitator Superfamily BED33_RS20695 PF01032 FecCD transport family BED33_RS20700 PF01497 Periplasmic binding protein BED33_RS20705 PF00005 ABC transporter BED33_RS20710 PF00905 Penicillin binding protein transpeptidase domain BED33_RS20710 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal BED33_RS20710 PF00912 Transglycosylase BED33_RS20710 PF14814 Bifunctional transglycosylase second domain BED33_RS20715 PF08482 ATP-dependent helicase C-terminal BED33_RS20715 PF00271 Helicase conserved C-terminal domain BED33_RS20715 PF04408 Helicase associated domain (HA2) BED33_RS20715 PF00270 DEAD/DEAH box helicase BED33_RS20720 PF02834 LigT like Phosphoesterase BED33_RS20725 PF17746 SfsA N-terminal OB domain BED33_RS20725 PF03749 Sugar fermentation stimulation protein RE domain BED33_RS20730 PF01258 Prokaryotic dksA/traR C4-type zinc finger BED33_RS20735 PF00749 tRNA synthetases class I (E and Q), catalytic domain BED33_RS20740 PF12627 Probable RNA and SrmB- binding site of polymerase A BED33_RS20740 PF12626 Polymerase A arginine-rich C-terminus BED33_RS20740 PF01743 Poly A polymerase head domain BED33_RS20745 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BED33_RS20750 PF02548 Ketopantoate hydroxymethyltransferase BED33_RS20755 PF02569 Pantoate-beta-alanine ligase BED33_RS20760 PF02261 Aspartate decarboxylase BED33_RS20765 PF01522 Polysaccharide deacetylase BED33_RS20770 PF01061 ABC-2 type transporter BED33_RS20775 PF00005 ABC transporter BED33_RS20780 PF00484 Carbonic anhydrase BED33_RS20785 PF00156 Phosphoribosyl transferase domain BED33_RS20790 PF00394 Multicopper oxidase BED33_RS20790 PF07731 Multicopper oxidase BED33_RS20790 PF07732 Multicopper oxidase BED33_RS20790 PF10518 TAT (twin-arginine translocation) pathway signal sequence BED33_RS20795 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) BED33_RS20800 PF17284 Spermidine synthase tetramerisation domain BED33_RS20805 PF02675 S-adenosylmethionine decarboxylase BED33_RS20810 PF18624 CDI immunity protein BED33_RS20815 PF00892 EamA-like transporter family BED33_RS20820 PF06062 Uncharacterised protein family (UPF0231) BED33_RS20825 PF06434 Aconitate hydratase 2 N-terminus BED33_RS20825 PF00330 Aconitase family (aconitate hydratase) BED33_RS20825 PF11791 Aconitate B N-terminal domain BED33_RS20830 PF07715 TonB-dependent Receptor Plug Domain BED33_RS20830 PF00593 TonB dependent receptor BED33_RS20835 PF12833 Helix-turn-helix domain BED33_RS20835 PF01965 DJ-1/PfpI family BED33_RS20845 PF07992 Pyridine nucleotide-disulphide oxidoreductase BED33_RS20845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BED33_RS20850 PF00364 Biotin-requiring enzyme BED33_RS20850 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BED33_RS20850 PF02817 e3 binding domain BED33_RS20855 PF00456 Transketolase, thiamine diphosphate binding domain BED33_RS20855 PF17831 Pyruvate dehydrogenase E1 component middle domain BED33_RS20860 PF07729 FCD domain BED33_RS20860 PF00392 Bacterial regulatory proteins, gntR family BED33_RS20865 PF00324 Amino acid permease BED33_RS20870 PF17113 Regulatory signalling modulator protein AmpE BED33_RS20875 PF01510 N-acetylmuramoyl-L-alanine amidase BED33_RS20880 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BED33_RS20880 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BED33_RS20885 PF07963 Prokaryotic N-terminal methylation motif BED33_RS20890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain BED33_RS20890 PF00437 Type II/IV secretion system protein BED33_RS20895 PF00482 Type II secretion system (T2SS), protein F BED33_RS20900 PF00478 IMP dehydrogenase / GMP reductase domain BED33_RS20905 PF01121 Dephospho-CoA kinase BED33_RS20910 PF07072 Cell division protein BED33_RS20915 PF03884 DNA gyrase inhibitor YacG BED33_RS20920 PF00293 NUDIX domain BED33_RS20925 PF02810 SEC-C motif BED33_RS20925 PF01043 SecA preprotein cross-linking domain BED33_RS20925 PF07517 SecA DEAD-like domain BED33_RS20925 PF07516 SecA Wing and Scaffold domain BED33_RS20930 PF06558 Secretion monitor precursor protein (SecM) BED33_RS20940 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase BED33_RS20945 PF00091 Tubulin/FtsZ family, GTPase domain BED33_RS20945 PF12327 FtsZ family, C-terminal domain BED33_RS20950 PF02491 SHS2 domain inserted in FTSA BED33_RS20955 PF03799 Cell division protein FtsQ BED33_RS20955 PF08478 POTRA domain, FtsQ-type BED33_RS20960 PF01820 D-ala D-ala ligase N-terminus BED33_RS20960 PF07478 D-ala D-ala ligase C-terminus BED33_RS20965 PF02875 Mur ligase family, glutamate ligase domain BED33_RS20965 PF08245 Mur ligase middle domain BED33_RS20965 PF01225 Mur ligase family, catalytic domain BED33_RS20970 PF04101 Glycosyltransferase family 28 C-terminal domain BED33_RS20970 PF03033 Glycosyltransferase family 28 N-terminal domain BED33_RS20975 PF01098 Cell cycle protein BED33_RS20980 PF08245 Mur ligase middle domain BED33_RS20980 PF02875 Mur ligase family, glutamate ligase domain BED33_RS20985 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BED33_RS20985 PF00953 Glycosyl transferase family 4 BED33_RS20990 PF01225 Mur ligase family, catalytic domain BED33_RS20990 PF02875 Mur ligase family, glutamate ligase domain BED33_RS20990 PF08245 Mur ligase middle domain BED33_RS20995 PF01225 Mur ligase family, catalytic domain BED33_RS20995 PF08245 Mur ligase middle domain BED33_RS20995 PF02875 Mur ligase family, glutamate ligase domain BED33_RS21000 PF00905 Penicillin binding protein transpeptidase domain BED33_RS21000 PF03717 Penicillin-binding Protein dimerisation domain BED33_RS21005 PF04999 Cell division protein FtsL BED33_RS21010 PF01795 MraW methylase family BED33_RS21015 PF02381 MraZ protein, putative antitoxin-like BED33_RS21020 PF06610 L-alanine exporter BED33_RS21025 PF00356 Bacterial regulatory proteins, lacI family BED33_RS21025 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BED33_RS21030 PF10369 Small subunit of acetolactate synthase BED33_RS21035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BED33_RS21035 PF00205 Thiamine pyrophosphate enzyme, central domain BED33_RS21035 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BED33_RS21040 PF00501 AMP-binding enzyme BED33_RS21045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS21045 PF03466 LysR substrate binding domain BED33_RS21050 PF00682 HMGL-like BED33_RS21050 PF08502 LeuA allosteric (dimerisation) domain BED33_RS21055 PF00180 Isocitrate/isopropylmalate dehydrogenase BED33_RS21060 PF00330 Aconitase family (aconitate hydratase) BED33_RS21065 PF00694 Aconitase C-terminal domain BED33_RS21070 PF01212 Beta-eliminating lyase BED33_RS21080 PF07690 Major Facilitator Superfamily BED33_RS21085 PF02901 Pyruvate formate lyase-like BED33_RS21085 PF01228 Glycine radical BED33_RS21095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BED33_RS21095 PF12793 Sugar transport-related sRNA regulator N-term BED33_RS21115 PF00528 Binding-protein-dependent transport system inner membrane component BED33_RS21120 PF00005 ABC transporter BED33_RS21125 PF09335 SNARE associated Golgi protein BED33_RS21130 PF03104 DNA polymerase family B, exonuclease domain BED33_RS21130 PF00136 DNA polymerase family B BED33_RS21135 PF12137 RNA polymerase recycling family C-terminal BED33_RS21135 PF18339 RapA N-terminal Tudor like domain 1 BED33_RS21135 PF00271 Helicase conserved C-terminal domain BED33_RS21135 PF18337 RapA N-terminal Tudor like domain BED33_RS21135 PF00176 SNF2 family N-terminal domain BED33_RS21140 PF11924 Inverse autotransporter, beta-domain BED33_RS21140 PF07979 Intimin C-type lectin domain BED33_RS21140 PF09134 Invasin, domain 3 BED33_RS21140 PF02369 Bacterial Ig-like domain (group 1) BED33_RS21145 PF00849 RNA pseudouridylate synthase BED33_RS21150 PF05099 Tellurite resistance protein TerB BED33_RS21150 PF00226 DnaJ domain BED33_RS21155 PF04453 LPS transport system D BED33_RS21155 PF03968 OstA-like protein BED33_RS21160 PF09312 SurA N-terminal domain BED33_RS21160 PF00639 PPIC-type PPIASE domain BED33_RS21165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BED33_RS21170 PF00398 Ribosomal RNA adenine dimethylase BED33_RS21175 PF04379 ApaG domain BED33_RS21180 PF00149 Calcineurin-like phosphoesterase BED33_RS21185 PF00186 Dihydrofolate reductase BED33_RS21190 PF12821 Threonine/Serine exporter, ThrE BED33_RS21195 PF06738 Putative threonine/serine exporter BED33_RS21200 PF01810 LysE type translocator BED33_RS21205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BED33_RS21205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BED33_RS21205 PF02142 MGS-like domain BED33_RS21210 PF00117 Glutamine amidotransferase class-I BED33_RS21210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BED33_RS21215 PF05173 Dihydrodipicolinate reductase, C-terminus BED33_RS21215 PF01113 Dihydrodipicolinate reductase, N-terminus BED33_RS21220 PF02401 LytB protein BED33_RS21225 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BED33_RS21230 PF01252 Signal peptidase (SPase) II BED33_RS21235 PF06827 Zinc finger found in FPG and IleRS BED33_RS21235 PF00133 tRNA synthetases class I (I, L, M and V) BED33_RS21235 PF08264 Anticodon-binding domain of tRNA BED33_RS21240 PF06574 FAD synthetase BED33_RS21240 PF01687 Riboflavin kinase BED33_RS21250 PF01649 Ribosomal protein S20 BED33_RS21255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS21255 PF03466 LysR substrate binding domain BED33_RS21260 PF06965 Na+/H+ antiporter 1 BED33_RS21265 PF01556 DnaJ C terminal domain BED33_RS21265 PF00226 DnaJ domain BED33_RS21265 PF00684 DnaJ central domain BED33_RS21270 PF00012 Hsp70 protein BED33_RS21275 PF01184 GPR1/FUN34/yaaH family BED33_RS21285 PF07690 Major Facilitator Superfamily BED33_RS21290 PF00994 Probable molybdopterin binding domain BED33_RS21295 PF00923 Transaldolase/Fructose-6-phosphate aldolase BED33_RS21300 PF03883 Peroxide stress protein YaaA BED33_RS21305 PF01548 Transposase BED33_RS21305 PF02371 Transposase IS116/IS110/IS902 family BED33_RS21310 PF14821 Threonine synthase N terminus BED33_RS21310 PF00291 Pyridoxal-phosphate dependent enzyme BED33_RS21315 PF00288 GHMP kinases N terminal domain BED33_RS21315 PF08544 GHMP kinases C terminal BED33_RS21320 PF03447 Homoserine dehydrogenase, NAD binding domain BED33_RS21320 PF13840 ACT domain BED33_RS21320 PF00742 Homoserine dehydrogenase BED33_RS21320 PF00696 Amino acid kinase family BED33_RS21320 PF01842 ACT domain BED33_RS21330 PF00072 Response regulator receiver domain BED33_RS21330 PF00486 Transcriptional regulatory protein, C terminal BED33_RS21335 PF05981 CreA protein BED33_RS21340 PF12833 Helix-turn-helix domain BED33_RS21340 PF06445 GyrI-like small molecule binding domain BED33_RS21345 PF00300 Histidine phosphatase superfamily (branch 1) BED33_RS21355 PF01371 Trp repressor protein BED33_RS21360 PF01464 Transglycosylase SLT domain BED33_RS21360 PF14718 Soluble lytic murein transglycosylase L domain BED33_RS21365 PF00689 Cation transporting ATPase, C-terminus BED33_RS21365 PF00690 Cation transporter/ATPase, N-terminus BED33_RS21375 PF17152 Periplasmic sensor domain BED33_RS21375 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS21380 PF00691 OmpA family BED33_RS21385 PF12848 ABC transporter BED33_RS21385 PF00005 ABC transporter BED33_RS21390 PF02661 Fic/DOC family BED33_RS21395 PF03466 LysR substrate binding domain BED33_RS21395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BED33_RS21400 PF08240 Alcohol dehydrogenase GroES-like domain BED33_RS21400 PF00107 Zinc-binding dehydrogenase BED33_RS21410 PF18073 Rubredoxin metal binding domain BED33_RS21415 PF18429 Domain of unknown function (DUF5609) BED33_RS21420 PF10144 Bacterial virulence factor haemolysin BED33_RS21425 PF01048 Phosphorylase superfamily BED33_RS21430 PF01676 Metalloenzyme superfamily BED33_RS21435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BED33_RS21435 PF02885 Glycosyl transferase family, helical bundle domain BED33_RS21435 PF00591 Glycosyl transferase family, a/b domain BED33_RS21440 PF01791 DeoC/LacD family aldolase BED33_RS21445 PF01773 Na+ dependent nucleoside transporter N-terminus BED33_RS21445 PF07662 Na+ dependent nucleoside transporter C-terminus BED33_RS21445 PF07670 Nucleoside recognition BED33_RS21450 PF01026 TatD related DNase BED33_RS21455 PF01734 Patatin-like phospholipase BED33_RS21460 PF07043 Protein of unknown function (DUF1328) BED33_RS21465 PF04972 BON domain BED33_RS21470 PF03144 Elongation factor Tu domain 2 BED33_RS21470 PF16658 Class II release factor RF3, C-terminal domain BED33_RS21470 PF00009 Elongation factor Tu GTP binding domain BED33_RS21475 PF00583 Acetyltransferase (GNAT) family BED33_RS21480 PF03603 DNA polymerase III psi subunit BED33_RS21485 PF08468 Methyltransferase small domain N-terminal BED33_RS21485 PF05175 Methyltransferase small domain BED33_RS21490 PF00248 Aldo/keto reductase family BED33_RS21505 PF07256 Protein of unknown function (DUF1435) BED33_RS21510 PF00990 Diguanylate cyclase, GGDEF domain BED33_RS21515 PF00593 TonB dependent receptor BED33_RS21515 PF07660 Secretin and TonB N terminus short domain BED33_RS21515 PF07715 TonB-dependent Receptor Plug Domain BED33_RS21525 PF00294 pfkB family carbohydrate kinase BED33_RS21530 PF11471 Maltoporin periplasmic N-terminal extension BED33_RS21530 PF02264 LamB porin BED33_RS21535 PF00367 phosphotransferase system, EIIB BED33_RS21535 PF02378 Phosphotransferase system, EIIC BED33_RS21545 PF00356 Bacterial regulatory proteins, lacI family BED33_RS21545 PF13407 Periplasmic binding protein domain BED33_RS21550 PF00989 PAS fold BED33_RS21550 PF02954 Bacterial regulatory protein, Fis family BED33_RS21550 PF00158 Sigma-54 interaction domain BED33_RS21555 PF01095 Pectinesterase BED33_RS21580 PF13358 DDE superfamily endonuclease BED33_RS21580 PF13592 Winged helix-turn helix BED33_RS21585 PF02543 Carbamoyltransferase N-terminus BED33_RS21585 PF16861 Carbamoyltransferase C-terminus BED33_RS21600 PF02734 DAK2 domain BED33_RS21605 PF02733 Dak1 domain BED33_RS21610 PF00465 Iron-containing alcohol dehydrogenase BED33_RS21615 PF00873 AcrB/AcrD/AcrF family BED33_RS21620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BED33_RS21640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) BED33_RS21645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BED33_RS21645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BED33_RS21650 PF00325 Bacterial regulatory proteins, crp family BED33_RS21650 PF04198 Putative sugar-binding domain BED33_RS21655 PF00005 ABC transporter BED33_RS21660 PF02653 Branched-chain amino acid transport system / permease component BED33_RS21665 PF02653 Branched-chain amino acid transport system / permease component BED33_RS21670 PF13407 Periplasmic binding protein domain BED33_RS21675 PF01791 DeoC/LacD family aldolase BED33_RS21680 PF03992 Antibiotic biosynthesis monooxygenase BED33_RS21690 PF10696 Protein of unknown function (DUF2501) BED33_RS21695 PF00872 Transposase, Mutator family BED33_RS21705 PF01527 Transposase BED33_RS21715 PF00102 Protein-tyrosine phosphatase BED33_RS21715 PF09013 YopH, N-terminal BED33_RS21720 PF09013 YopH, N-terminal BED33_RS21725 PF02108 Flagellar assembly protein FliH BED33_RS21730 PF06578 YOP proteins translocation protein K (YscK) BED33_RS21735 PF01514 Secretory protein of YscJ/FliF family BED33_RS21740 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI BED33_RS21745 PF09025 YopR, type III needle-polymerisation regulator BED33_RS21750 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) BED33_RS21755 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BED33_RS21760 PF08988 Type III secretion system, cytoplasmic E component of needle BED33_RS21765 PF16697 Inner membrane component of T3SS, cytoplasmic domain BED33_RS21765 PF16693 Inner membrane component of T3SS, periplasmic domain BED33_RS21770 PF00263 Bacterial type II and III secretion system protein BED33_RS21770 PF03958 Bacterial type II/III secretion system short domain BED33_RS21775 PF05932 Tir chaperone protein (CesT) family BED33_RS21780 PF17551 Family of unknown function (DUF5463) BED33_RS21785 PF12833 Helix-turn-helix domain BED33_RS21790 PF09619 Type III secretion system lipoprotein chaperone (YscW) BED33_RS21795 PF01312 FlhB HrpN YscU SpaS Family BED33_RS21800 PF01311 Bacterial export proteins, family 1 BED33_RS21805 PF01313 Bacterial export proteins, family 3 BED33_RS21815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BED33_RS21820 PF02120 Flagellar hook-length control protein FliK BED33_RS21825 PF02120 Flagellar hook-length control protein FliK BED33_RS21830 PF07321 Type III secretion protein YscO BED33_RS21840 PF07201 HrpJ-like domain BED33_RS21845 PF09059 TyeA BED33_RS21855 PF09474 Type III secretion system YscX (type_III_YscX) BED33_RS21865 PF00771 FHIPEP family BED33_RS21870 PF09621 Type III secretion system regulator (LcrR) BED33_RS21875 PF07216 LcrG protein BED33_RS21880 PF04792 V antigen (LcrV) protein BED33_RS21885 PF07720 Tetratricopeptide repeat BED33_RS21890 PF04888 Secretion system effector C (SseC) like family BED33_RS21895 PF05844 YopD protein BED33_RS21900 PF00872 Transposase, Mutator family BED33_RS21910 PF12468 Type III secretion system leucine rich repeat protein BED33_RS21910 PF12468 Type III secretion system leucine rich repeat protein BED33_RS21930 PF05932 Tir chaperone protein (CesT) family BED33_RS21935 PF03543 Yersinia/Haemophilus virulence surface antigen BED33_RS21950 PF05818 Enterobacterial TraT complement resistance protein BED33_RS21955 PF03421 YopJ Serine/Threonine acetyltransferase BED33_RS21975 PF01527 Transposase BED33_RS21980 PF00665 Integrase core domain BED33_RS21985 PF01526 Tn3 transposase DDE domain BED33_RS21985 PF13700 Domain of unknown function (DUF4158) BED33_RS21990 PF02796 Helix-turn-helix domain of resolvase BED33_RS21990 PF00239 Resolvase, N terminal domain BED33_RS21995 PF02661 Fic/DOC family BED33_RS21995 PF13784 Fic/DOC family N-terminal BED33_RS22005 PF02387 IncFII RepA protein family BED33_RS22010 PF10723 Replication regulatory protein RepB BED33_RS22025 PF18272 single-stranded DNA binding TraI N-terminal subdomain BED33_RS22025 PF07057 DNA helicase TraI BED33_RS22025 PF18340 DNA relaxase TraI 2B/2B-like domain BED33_RS22025 PF08751 TrwC relaxase BED33_RS22030 PF18340 DNA relaxase TraI 2B/2B-like domain BED33_RS22030 PF07057 DNA helicase TraI BED33_RS22030 PF18272 single-stranded DNA binding TraI N-terminal subdomain BED33_RS22030 PF08751 TrwC relaxase BED33_RS22040 PF03358 NADPH-dependent FMN reductase BED33_RS22045 PF01022 Bacterial regulatory protein, arsR family BED33_RS22050 PF02040 Arsenical pump membrane protein BED33_RS22055 PF03960 ArsC family BED33_RS22060 PF02796 Helix-turn-helix domain of resolvase BED33_RS22060 PF00239 Resolvase, N terminal domain BED33_RS22065 PF01526 Tn3 transposase DDE domain BED33_RS22065 PF13700 Domain of unknown function (DUF4158) BED33_RS22065 PF13700 Domain of unknown function (DUF4158) BED33_RS22065 PF01526 Tn3 transposase DDE domain BED33_RS22075 PF00892 EamA-like transporter family BED33_RS22080 PF03895 YadA-like membrane anchor domain BED33_RS22080 PF05658 Head domain of trimeric autotransporter adhesin BED33_RS22080 PF05662 Coiled stalk of trimeric autotransporter adhesin BED33_RS22090 PF03895 YadA-like membrane anchor domain BED33_RS22090 PF05658 Head domain of trimeric autotransporter adhesin BED33_RS22090 PF05662 Coiled stalk of trimeric autotransporter adhesin BED33_RS22105 PF09013 YopH, N-terminal BED33_RS22135 PF13614 AAA domain BED33_RS22140 PF18090 Centromere-binding protein HTH domain BED33_RS22140 PF02195 ParB-like nuclease domain BED33_RS22145 PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH BED33_RS22155 PF09020 YopE, N terminal BED33_RS22155 PF03545 Yersinia virulence determinant (YopE) BED33_RS22160 PF05932 Tir chaperone protein (CesT) family BED33_RS22165 PF01527 Transposase BED33_RS22180 PF00102 Protein-tyrosine phosphatase BED33_RS22180 PF09013 YopH, N-terminal BED33_RS22185 PF09013 YopH, N-terminal BED33_RS22190 PF02108 Flagellar assembly protein FliH BED33_RS22195 PF06578 YOP proteins translocation protein K (YscK) BED33_RS22200 PF01514 Secretory protein of YscJ/FliF family BED33_RS22205 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI BED33_RS22210 PF09025 YopR, type III needle-polymerisation regulator BED33_RS22215 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) BED33_RS22220 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF BED33_RS22225 PF08988 Type III secretion system, cytoplasmic E component of needle BED33_RS22230 PF16697 Inner membrane component of T3SS, cytoplasmic domain BED33_RS22230 PF16693 Inner membrane component of T3SS, periplasmic domain BED33_RS22235 PF03958 Bacterial type II/III secretion system short domain BED33_RS22235 PF00263 Bacterial type II and III secretion system protein BED33_RS22240 PF05932 Tir chaperone protein (CesT) family BED33_RS22245 PF12833 Helix-turn-helix domain BED33_RS22250 PF09619 Type III secretion system lipoprotein chaperone (YscW) BED33_RS22255 PF01312 FlhB HrpN YscU SpaS Family BED33_RS22260 PF01311 Bacterial export proteins, family 1 BED33_RS22265 PF01313 Bacterial export proteins, family 3 BED33_RS22270 PF00813 FliP family BED33_RS22275 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BED33_RS22280 PF02120 Flagellar hook-length control protein FliK BED33_RS22285 PF02120 Flagellar hook-length control protein FliK BED33_RS22290 PF07321 Type III secretion protein YscO BED33_RS22295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BED33_RS22295 PF02874 ATP synthase alpha/beta family, beta-barrel domain BED33_RS22295 PF18269 T3SS EscN ATPase C-terminal domain BED33_RS22300 PF07201 HrpJ-like domain BED33_RS22305 PF09059 TyeA BED33_RS22315 PF09474 Type III secretion system YscX (type_III_YscX) BED33_RS22325 PF00771 FHIPEP family BED33_RS22460 PF04198 Putative sugar-binding domain BED33_RS22460 PF00325 Bacterial regulatory proteins, crp family BED33_RS22760 PF01276 Orn/Lys/Arg decarboxylase, major domain BED33_RS22760 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BED33_RS22760 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain BED33_RS22865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BED33_RS22865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BED33_RS22865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BED33_RS22865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I