BED33_RS00050 SM01120 BED33_RS00050 BED33_RS00105 SM00382 ATPases associated with a variety of cellular activities BED33_RS00125 SM01133 BED33_RS00125 BED33_RS00235 SM00382 ATPases associated with a variety of cellular activities BED33_RS00240 SM00382 ATPases associated with a variety of cellular activities BED33_RS00270 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS00270 SM00866 BED33_RS00270 BED33_RS00295 SM00382 ATPases associated with a variety of cellular activities BED33_RS00300 SM00382 ATPases associated with a variety of cellular activities BED33_RS00310 SM00072 Guanylate kinase homologues. BED33_RS00345 SM00382 ATPases associated with a variety of cellular activities BED33_RS00435 SM00487 DEAD-like helicases superfamily BED33_RS00435 SM00490 helicase superfamily c-terminal domain BED33_RS00440 SM00028 Tetratricopeptide repeats BED33_RS00445 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS00445 SM00322 K homology RNA-binding domain BED33_RS00450 SM01387 BED33_RS00450 BED33_RS00465 SM00173 Ras subfamily of RAS small GTPases BED33_RS00470 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS00470 SM00322 K homology RNA-binding domain BED33_RS00505 SM00382 ATPases associated with a variety of cellular activities BED33_RS00515 SM01103 BED33_RS00515 BED33_RS00530 SM00448 cheY-homologous receiver domain BED33_RS00530 SM00862 Transcriptional regulatory protein, C terminal BED33_RS00535 SM00387 Histidine kinase-like ATPases BED33_RS00535 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS00600 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS00600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS00630 SM01091 Transporter associated domain BED33_RS00720 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED33_RS00725 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS00725 SM00357 Cold shock protein domain BED33_RS00725 SM00955 BED33_RS00725 BED33_RS00735 SM00788 Adenylosuccinate synthetase BED33_RS00745 SM00244 prohibitin homologues BED33_RS00750 SM00244 prohibitin homologues BED33_RS00770 SM00853 MutL C terminal dimerisation domain BED33_RS00770 SM01340 BED33_RS00770 BED33_RS00775 SM00257 Lysin motif BED33_RS00775 SM00646 BED33_RS00775 BED33_RS00805 SM00479 BED33_RS00805 BED33_RS00865 SM00841 Elongation factor P, C-terminal BED33_RS00865 SM01185 BED33_RS00865 BED33_RS00890 SM00883 Chaperonin 10 Kd subunit BED33_RS00955 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS00995 SM00382 ATPases associated with a variety of cellular activities BED33_RS01035 SM00382 ATPases associated with a variety of cellular activities BED33_RS01040 SM00965 Secretin and TonB N terminus short domain BED33_RS01155 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS01225 SM00421 helix_turn_helix, Lux Regulon BED33_RS01225 SM00448 cheY-homologous receiver domain BED33_RS01290 SM00798 AICARFT/IMPCHase bienzyme BED33_RS01290 SM00851 MGS-like domain BED33_RS01295 SM01209 BED33_RS01295 BED33_RS01295 SM01210 BED33_RS01295 BED33_RS01305 SM00411 bacterial (prokaryotic) histone like domain BED33_RS01360 SM00876 Biotin and Thiamin Synthesis associated domain BED33_RS01370 SM00663 RNA polymerase I subunit A N-terminus BED33_RS01395 SM00649 Ribosomal protein L11/L12 BED33_RS01400 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED33_RS01400 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED33_RS01530 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED33_RS01535 SM01004 Delta-aminolevulinic acid dehydratase BED33_RS01630 SM00382 ATPases associated with a variety of cellular activities BED33_RS01680 SM00382 ATPases associated with a variety of cellular activities BED33_RS01685 SM00382 ATPases associated with a variety of cellular activities BED33_RS01730 SM00382 ATPases associated with a variety of cellular activities BED33_RS01735 SM00382 ATPases associated with a variety of cellular activities BED33_RS01735 SM00962 SRP54-type protein, GTPase domain BED33_RS01735 SM00963 SRP54-type protein, helical bundle domain BED33_RS01830 SM00341 Helicase and RNase D C-terminal BED33_RS01830 SM00487 DEAD-like helicases superfamily BED33_RS01830 SM00490 helicase superfamily c-terminal domain BED33_RS01830 SM00956 BED33_RS01830 BED33_RS01900 SM01219 BED33_RS01900 BED33_RS02005 SM00984 UDP binding domain BED33_RS02030 SM00357 Cold shock protein domain BED33_RS02030 SM00382 ATPases associated with a variety of cellular activities BED33_RS02030 SM00959 Rho termination factor, N-terminal domain BED33_RS02040 SM00487 DEAD-like helicases superfamily BED33_RS02040 SM00490 helicase superfamily c-terminal domain BED33_RS02050 SM00060 Fibronectin type 3 domain BED33_RS02095 SM00778 Zinc-binding domain of primase-helicase BED33_RS02095 SM00885 D5 N terminal like BED33_RS02130 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS02140 SM00382 ATPases associated with a variety of cellular activities BED33_RS02170 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS02215 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS02230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS02230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS02230 SM01358 BED33_RS02230 BED33_RS02245 SM00966 SpoVT / AbrB like domain BED33_RS02255 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS02335 SM00642 Alpha-amylase domain BED33_RS02415 SM00448 cheY-homologous receiver domain BED33_RS02415 SM00862 Transcriptional regulatory protein, C terminal BED33_RS02420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS02420 SM00387 Histidine kinase-like ATPases BED33_RS02420 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS02425 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS02435 SM00971 Serine acetyltransferase, N-terminal BED33_RS02455 SM00450 Rhodanese Homology Domain BED33_RS02485 SM00829 Enoylreductase BED33_RS02525 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BED33_RS02525 SM01232 BED33_RS02525 BED33_RS02625 SM00778 Zinc-binding domain of primase-helicase BED33_RS02665 SM00849 Metallo-beta-lactamase superfamily BED33_RS02675 SM00052 Putative diguanylate phosphodiesterase BED33_RS02675 SM00091 PAS domain BED33_RS02675 SM00267 diguanylate cyclase BED33_RS02710 SM00072 Guanylate kinase homologues. BED33_RS02715 SM01409 BED33_RS02715 BED33_RS02720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED33_RS02720 SM00954 Region found in RelA / SpoT proteins BED33_RS02730 SM00487 DEAD-like helicases superfamily BED33_RS02730 SM00490 helicase superfamily c-terminal domain BED33_RS02750 SM00421 helix_turn_helix, Lux Regulon BED33_RS02755 SM00421 helix_turn_helix, Lux Regulon BED33_RS02790 SM01230 BED33_RS02790 BED33_RS02800 SM00091 PAS domain BED33_RS02800 SM00387 Histidine kinase-like ATPases BED33_RS02800 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS02805 SM00382 ATPases associated with a variety of cellular activities BED33_RS02805 SM00448 cheY-homologous receiver domain BED33_RS02810 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS02825 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED33_RS02825 SM00474 3'-5' exonuclease BED33_RS02825 SM00475 5'-3' exonuclease BED33_RS02825 SM00482 DNA polymerase A domain BED33_RS02885 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS02885 SM00895 BED33_RS02885 BED33_RS02895 SM00354 helix_turn _helix lactose operon repressor BED33_RS02915 SM00382 ATPases associated with a variety of cellular activities BED33_RS02930 SM00382 ATPases associated with a variety of cellular activities BED33_RS02935 SM00327 von Willebrand factor (vWF) type A domain BED33_RS02950 SM00344 helix_turn_helix ASNC type BED33_RS02960 SM01228 BED33_RS02960 BED33_RS03005 SM00382 ATPases associated with a variety of cellular activities BED33_RS03040 SM00382 ATPases associated with a variety of cellular activities BED33_RS03055 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS03085 SM00421 helix_turn_helix, Lux Regulon BED33_RS03085 SM00448 cheY-homologous receiver domain BED33_RS03090 SM00387 Histidine kinase-like ATPases BED33_RS03090 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS03100 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS03100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS03110 SM00382 ATPases associated with a variety of cellular activities BED33_RS03110 SM00930 BED33_RS03110 BED33_RS03135 SM01234 BED33_RS03135 BED33_RS03150 SM00382 ATPases associated with a variety of cellular activities BED33_RS03150 SM00760 Bacterial dnaA protein helix-turn-helix domain BED33_RS03155 SM00480 DNA polymerase III beta subunit BED33_RS03165 SM00387 Histidine kinase-like ATPases BED33_RS03165 SM00433 TopoisomeraseII BED33_RS03245 SM00382 ATPases associated with a variety of cellular activities BED33_RS03245 SM01086 C-terminal, D2-small domain, of ClpB protein BED33_RS03260 SM00354 helix_turn _helix lactose operon repressor BED33_RS03265 SM00487 DEAD-like helicases superfamily BED33_RS03265 SM00490 helicase superfamily c-terminal domain BED33_RS03305 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED33_RS03345 SM00382 ATPases associated with a variety of cellular activities BED33_RS03450 SM00382 ATPases associated with a variety of cellular activities BED33_RS03475 SM00382 ATPases associated with a variety of cellular activities BED33_RS03580 SM00354 helix_turn _helix lactose operon repressor BED33_RS03615 SM00912 haemagglutination activity domain BED33_RS03630 SM00912 haemagglutination activity domain BED33_RS03645 SM00387 Histidine kinase-like ATPases BED33_RS03650 SM00421 helix_turn_helix, Lux Regulon BED33_RS03650 SM00448 cheY-homologous receiver domain BED33_RS03685 SM00382 ATPases associated with a variety of cellular activities BED33_RS03690 SM00382 ATPases associated with a variety of cellular activities BED33_RS03735 SM00028 Tetratricopeptide repeats BED33_RS03745 SM00052 Putative diguanylate phosphodiesterase BED33_RS03785 SM00052 Putative diguanylate phosphodiesterase BED33_RS03805 SM00869 Autotransporter beta-domain BED33_RS03835 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BED33_RS03875 SM00382 ATPases associated with a variety of cellular activities BED33_RS03905 SM00382 ATPases associated with a variety of cellular activities BED33_RS03915 SM00954 Region found in RelA / SpoT proteins BED33_RS04050 SM00354 helix_turn _helix lactose operon repressor BED33_RS04070 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED33_RS04095 SM00642 Alpha-amylase domain BED33_RS04100 SM00642 Alpha-amylase domain BED33_RS04135 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS04135 SM01134 BED33_RS04135 BED33_RS04145 SM00450 Rhodanese Homology Domain BED33_RS04155 SM00421 helix_turn_helix, Lux Regulon BED33_RS04205 SM00899 BED33_RS04205 BED33_RS04210 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS04210 SM00732 Likely ribonuclease with RNase H fold. BED33_RS04240 SM00448 cheY-homologous receiver domain BED33_RS04240 SM00862 Transcriptional regulatory protein, C terminal BED33_RS04245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS04245 SM00387 Histidine kinase-like ATPases BED33_RS04245 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS04260 SM00363 S4 RNA-binding domain BED33_RS04375 SM00354 helix_turn _helix lactose operon repressor BED33_RS04390 SM00382 ATPases associated with a variety of cellular activities BED33_RS04410 SM00100 Cyclic nucleotide-monophosphate binding domain BED33_RS04410 SM00419 helix_turn_helix, cAMP Regulatory protein BED33_RS04445 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS04475 SM00382 ATPases associated with a variety of cellular activities BED33_RS04540 SM00838 Elongation factor G C-terminus BED33_RS04540 SM00889 Elongation factor G, domain IV BED33_RS04560 SM01403 BED33_RS04560 BED33_RS04580 SM01382 BED33_RS04580 BED33_RS04580 SM01383 BED33_RS04580 BED33_RS04595 SM00322 K homology RNA-binding domain BED33_RS04615 SM01374 BED33_RS04615 BED33_RS04620 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED33_RS04685 SM00363 S4 RNA-binding domain BED33_RS04685 SM01390 BED33_RS04685 BED33_RS04690 SM00662 RNA polymerases D BED33_RS04705 SM00422 helix_turn_helix, mercury resistance BED33_RS04825 SM00346 helix_turn_helix isocitrate lyase regulation BED33_RS04830 SM01018 B12 binding domain BED33_RS04835 SM00912 haemagglutination activity domain BED33_RS04885 SM00382 ATPases associated with a variety of cellular activities BED33_RS04915 SM00563 Phosphate acyltransferases BED33_RS04960 SM00829 Enoylreductase BED33_RS04965 SM00382 ATPases associated with a variety of cellular activities BED33_RS05000 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS05035 SM00382 ATPases associated with a variety of cellular activities BED33_RS05050 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS05075 SM00357 Cold shock protein domain BED33_RS05080 SM00357 Cold shock protein domain BED33_RS05120 SM00878 Biotin carboxylase C-terminal domain BED33_RS05145 SM00829 Enoylreductase BED33_RS05150 SM00052 Putative diguanylate phosphodiesterase BED33_RS05150 SM00267 diguanylate cyclase BED33_RS05175 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS05530 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS05545 SM00354 helix_turn _helix lactose operon repressor BED33_RS05555 SM00642 Alpha-amylase domain BED33_RS05565 SM00460 Transglutaminase/protease-like homologues BED33_RS05620 SM00382 ATPases associated with a variety of cellular activities BED33_RS05650 SM00382 ATPases associated with a variety of cellular activities BED33_RS05685 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED33_RS05690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED33_RS05745 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS05750 SM00073 Histidine Phosphotransfer domain BED33_RS05750 SM00091 PAS domain BED33_RS05750 SM00387 Histidine kinase-like ATPases BED33_RS05750 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS05750 SM00448 cheY-homologous receiver domain BED33_RS05765 SM00749 bacterial OsmY and nodulation domain BED33_RS05805 SM00857 Resolvase, N terminal domain BED33_RS05825 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS05865 SM00829 Enoylreductase BED33_RS05925 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS05925 SM00895 BED33_RS05925 BED33_RS05945 SM00858 BED33_RS05945 BED33_RS05980 SM00869 Autotransporter beta-domain BED33_RS05990 SM00869 Autotransporter beta-domain BED33_RS06095 SM00400 zinc finger BED33_RS06095 SM00493 BED33_RS06095 BED33_RS06095 SM00766 DNA primase DnaG DnaB-binding BED33_RS06110 SM01207 BED33_RS06110 BED33_RS06115 SM00905 Dihydroneopterin aldolase BED33_RS06125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED33_RS06130 SM00287 Bacterial SH3 domain homologues BED33_RS06135 SM01118 BED33_RS06135 BED33_RS06210 SM00387 Histidine kinase-like ATPases BED33_RS06210 SM00433 TopoisomeraseII BED33_RS06230 SM00434 DNA Topoisomerase IV BED33_RS06235 SM00563 Phosphate acyltransferases BED33_RS06245 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS06260 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS06385 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS06410 SM00382 ATPases associated with a variety of cellular activities BED33_RS06445 SM00382 ATPases associated with a variety of cellular activities BED33_RS06475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS06520 SM00382 ATPases associated with a variety of cellular activities BED33_RS06545 SM00382 ATPases associated with a variety of cellular activities BED33_RS06565 SM00858 BED33_RS06565 BED33_RS06770 SM00052 Putative diguanylate phosphodiesterase BED33_RS06770 SM00091 PAS domain BED33_RS06770 SM00267 diguanylate cyclase BED33_RS06815 SM00354 helix_turn _helix lactose operon repressor BED33_RS06830 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS06865 SM00382 ATPases associated with a variety of cellular activities BED33_RS06985 SM00478 endonuclease III BED33_RS06985 SM00525 BED33_RS06985 BED33_RS07010 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS07020 SM01152 BED33_RS07020 BED33_RS07055 SM00732 Likely ribonuclease with RNase H fold. BED33_RS07080 SM00731 SprT homologues. BED33_RS07085 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED33_RS07125 SM00861 Transketolase, pyrimidine binding domain BED33_RS07130 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED33_RS07145 SM00194 Protein tyrosine phosphatase, catalytic domain BED33_RS07145 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED33_RS07325 SM00257 Lysin motif BED33_RS07335 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BED33_RS07335 SM00534 ATPase domain of DNA mismatch repair MUTS family BED33_RS07405 SM00382 ATPases associated with a variety of cellular activities BED33_RS07415 SM00382 ATPases associated with a variety of cellular activities BED33_RS07425 SM00825 Beta-ketoacyl synthase BED33_RS07440 SM00822 BED33_RS07440 BED33_RS07450 SM01235 BED33_RS07450 BED33_RS07460 SM00838 Elongation factor G C-terminus BED33_RS07460 SM00889 Elongation factor G, domain IV BED33_RS07465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED33_RS07505 SM01012 BED33_RS07505 BED33_RS07520 SM00382 ATPases associated with a variety of cellular activities BED33_RS07550 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS07585 SM00382 ATPases associated with a variety of cellular activities BED33_RS07595 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED33_RS07640 SM01091 Transporter associated domain BED33_RS07660 SM00382 ATPases associated with a variety of cellular activities BED33_RS07660 SM00962 SRP54-type protein, GTPase domain BED33_RS07660 SM00963 SRP54-type protein, helical bundle domain BED33_RS07695 SM00448 cheY-homologous receiver domain BED33_RS07695 SM00850 LytTr DNA-binding domain BED33_RS07705 SM00830 Chorismate mutase type II BED33_RS07710 SM00830 Chorismate mutase type II BED33_RS07720 SM00382 ATPases associated with a variety of cellular activities BED33_RS07720 SM01086 C-terminal, D2-small domain, of ClpB protein BED33_RS07730 SM00363 S4 RNA-binding domain BED33_RS07790 SM00155 Phospholipase D. Active site motifs. BED33_RS07795 SM00881 CoA binding domain BED33_RS07800 SM01144 BED33_RS07800 BED33_RS07810 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED33_RS07830 SM00347 helix_turn_helix multiple antibiotic resistance protein BED33_RS07875 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS07890 SM00382 ATPases associated with a variety of cellular activities BED33_RS08025 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS08050 SM00382 ATPases associated with a variety of cellular activities BED33_RS08285 SM01007 Class II Aldolase and Adducin N-terminal domain BED33_RS08315 SM00710 Parallel beta-helix repeats BED33_RS08355 SM00900 BED33_RS08355 BED33_RS08440 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED33_RS08450 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS08450 SM00866 BED33_RS08450 BED33_RS08470 SM01068 Putative carbohydrate binding domain BED33_RS08540 SM00448 cheY-homologous receiver domain BED33_RS08540 SM00862 Transcriptional regulatory protein, C terminal BED33_RS08545 SM00091 PAS domain BED33_RS08545 SM00387 Histidine kinase-like ATPases BED33_RS08545 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS08565 SM00642 Alpha-amylase domain BED33_RS08610 SM01323 BED33_RS08610 BED33_RS08670 SM00861 Transketolase, pyrimidine binding domain BED33_RS08685 SM00981 BED33_RS08685 BED33_RS08770 SM00382 ATPases associated with a variety of cellular activities BED33_RS08770 SM00994 ClpX C4-type zinc finger BED33_RS08770 SM01086 C-terminal, D2-small domain, of ClpB protein BED33_RS08775 SM00382 ATPases associated with a variety of cellular activities BED33_RS08775 SM00464 Found in ATP-dependent protease La (LON) BED33_RS08780 SM00411 bacterial (prokaryotic) histone like domain BED33_RS08790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED33_RS08820 SM00344 helix_turn_helix ASNC type BED33_RS08825 SM00382 ATPases associated with a variety of cellular activities BED33_RS08830 SM00382 ATPases associated with a variety of cellular activities BED33_RS08835 SM00938 Nitrogen regulatory protein P-II BED33_RS08880 SM00382 ATPases associated with a variety of cellular activities BED33_RS08975 SM00382 ATPases associated with a variety of cellular activities BED33_RS08985 SM00493 BED33_RS08985 BED33_RS08990 SM00387 Histidine kinase-like ATPases BED33_RS09090 SM00422 helix_turn_helix, mercury resistance BED33_RS09100 SM00244 prohibitin homologues BED33_RS09110 SM00822 BED33_RS09110 BED33_RS09120 SM00382 ATPases associated with a variety of cellular activities BED33_RS09135 SM01001 AIR carboxylase BED33_RS09150 SM00840 BED33_RS09150 BED33_RS09285 SM00382 ATPases associated with a variety of cellular activities BED33_RS09610 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS09635 SM00382 ATPases associated with a variety of cellular activities BED33_RS09675 SM00507 HNH nucleases BED33_RS09735 SM01252 BED33_RS09735 BED33_RS09825 SM01040 BRO family, N-terminal domain BED33_RS09830 SM01252 BED33_RS09830 BED33_RS09980 SM00448 cheY-homologous receiver domain BED33_RS09980 SM00862 Transcriptional regulatory protein, C terminal BED33_RS10000 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BED33_RS10015 SM00382 ATPases associated with a variety of cellular activities BED33_RS10050 SM00357 Cold shock protein domain BED33_RS10060 SM00267 diguanylate cyclase BED33_RS10070 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS10085 SM00936 Penicillin-binding protein 5, C-terminal domain BED33_RS10140 SM00382 ATPases associated with a variety of cellular activities BED33_RS10155 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS10170 SM00116 Domain in cystathionine beta-synthase and other proteins. BED33_RS10170 SM01091 Transporter associated domain BED33_RS10185 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS10270 SM01081 Putative carbohydrate binding domain BED33_RS10285 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS10320 SM00448 cheY-homologous receiver domain BED33_RS10320 SM00862 Transcriptional regulatory protein, C terminal BED33_RS10325 SM00387 Histidine kinase-like ATPases BED33_RS10325 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS10390 SM00796 Allophanate hydrolase subunit 1 BED33_RS10395 SM00797 Allophanate hydrolase subunit 2 BED33_RS10445 SM00861 Transketolase, pyrimidine binding domain BED33_RS10460 SM00881 CoA binding domain BED33_RS10565 SM00855 Phosphoglycerate mutase family BED33_RS10570 SM00477 DNA/RNA non-specific endonuclease BED33_RS10570 SM00892 DNA/RNA non-specific endonuclease BED33_RS10615 SM00382 ATPases associated with a variety of cellular activities BED33_RS10640 SM00382 ATPases associated with a variety of cellular activities BED33_RS10660 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS10660 SM00876 Biotin and Thiamin Synthesis associated domain BED33_RS10680 SM00382 ATPases associated with a variety of cellular activities BED33_RS10685 SM00487 DEAD-like helicases superfamily BED33_RS10685 SM00490 helicase superfamily c-terminal domain BED33_RS10700 SM00729 Elongator protein 3, MiaB family, Radical SAM BED33_RS10735 SM00382 ATPases associated with a variety of cellular activities BED33_RS10750 SM00487 DEAD-like helicases superfamily BED33_RS10750 SM00490 helicase superfamily c-terminal domain BED33_RS10765 SM00116 Domain in cystathionine beta-synthase and other proteins. BED33_RS10780 SM01118 BED33_RS10780 BED33_RS10785 SM00507 HNH nucleases BED33_RS10800 SM00382 ATPases associated with a variety of cellular activities BED33_RS10845 SM00382 ATPases associated with a variety of cellular activities BED33_RS10850 SM00450 Rhodanese Homology Domain BED33_RS10875 SM00382 ATPases associated with a variety of cellular activities BED33_RS10920 SM00487 DEAD-like helicases superfamily BED33_RS10920 SM00488 BED33_RS10920 BED33_RS10920 SM00491 BED33_RS10920 BED33_RS10945 SM00903 Flavin reductase like domain BED33_RS10955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED33_RS10955 SM00091 PAS domain BED33_RS10955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS10960 SM00382 ATPases associated with a variety of cellular activities BED33_RS10970 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS10970 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED33_RS11000 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BED33_RS11040 SM00382 ATPases associated with a variety of cellular activities BED33_RS11055 SM00852 Probable molybdopterin binding domain BED33_RS11070 SM00382 ATPases associated with a variety of cellular activities BED33_RS11095 SM00829 Enoylreductase BED33_RS11120 SM00354 helix_turn _helix lactose operon repressor BED33_RS11130 SM00382 ATPases associated with a variety of cellular activities BED33_RS11140 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED33_RS11140 SM00382 ATPases associated with a variety of cellular activities BED33_RS11225 SM00919 Malic enzyme, NAD binding domain BED33_RS11225 SM01274 BED33_RS11225 BED33_RS11300 SM01091 Transporter associated domain BED33_RS11330 SM00382 ATPases associated with a variety of cellular activities BED33_RS11395 SM01350 BED33_RS11395 BED33_RS11450 SM00382 ATPases associated with a variety of cellular activities BED33_RS11500 SM00382 ATPases associated with a variety of cellular activities BED33_RS11535 SM00877 BED33_RS11535 BED33_RS11540 SM00877 BED33_RS11540 BED33_RS11580 SM00877 BED33_RS11580 BED33_RS11585 SM00877 BED33_RS11585 BED33_RS11615 SM00877 BED33_RS11615 BED33_RS11620 SM00877 BED33_RS11620 BED33_RS11630 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS11710 SM00382 ATPases associated with a variety of cellular activities BED33_RS11730 SM00855 Phosphoglycerate mutase family BED33_RS11750 SM00421 helix_turn_helix, Lux Regulon BED33_RS11830 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS11830 SM01134 BED33_RS11830 BED33_RS11840 SM00260 Two component signalling adaptor domain BED33_RS11840 SM00448 cheY-homologous receiver domain BED33_RS11850 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS11870 SM00382 ATPases associated with a variety of cellular activities BED33_RS11890 SM00387 Histidine kinase-like ATPases BED33_RS11895 SM00421 helix_turn_helix, Lux Regulon BED33_RS11895 SM00448 cheY-homologous receiver domain BED33_RS11900 SM00448 cheY-homologous receiver domain BED33_RS11905 SM00387 Histidine kinase-like ATPases BED33_RS11915 SM00091 PAS domain BED33_RS11920 SM00764 Citrate lyase ligase C-terminal domain BED33_RS12045 SM00421 helix_turn_helix, Lux Regulon BED33_RS12045 SM00448 cheY-homologous receiver domain BED33_RS12120 SM00344 helix_turn_helix ASNC type BED33_RS12130 SM00829 Enoylreductase BED33_RS12140 SM01038 Beta galactosidase small chain BED33_RS12145 SM00354 helix_turn _helix lactose operon repressor BED33_RS12150 SM00357 Cold shock protein domain BED33_RS12160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS12160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS12180 SM00831 Cation transporter/ATPase, N-terminus BED33_RS12185 SM00829 Enoylreductase BED33_RS12215 SM00073 Histidine Phosphotransfer domain BED33_RS12215 SM00260 Two component signalling adaptor domain BED33_RS12215 SM00387 Histidine kinase-like ATPases BED33_RS12215 SM01231 BED33_RS12215 BED33_RS12220 SM00260 Two component signalling adaptor domain BED33_RS12225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS12225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS12225 SM00319 Homologues of the ligand binding domain of Tar BED33_RS12230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS12230 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS12230 SM00319 Homologues of the ligand binding domain of Tar BED33_RS12235 SM00138 Methyltransferase, chemotaxis proteins BED33_RS12240 SM00448 cheY-homologous receiver domain BED33_RS12245 SM00448 cheY-homologous receiver domain BED33_RS12290 SM00858 BED33_RS12290 BED33_RS12335 SM00047 Lysozyme subfamily 2 BED33_RS12395 SM00382 ATPases associated with a variety of cellular activities BED33_RS12440 SM00478 endonuclease III BED33_RS12445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED33_RS12450 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS12500 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS12500 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED33_RS12510 SM00382 ATPases associated with a variety of cellular activities BED33_RS12570 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS12590 SM00903 Flavin reductase like domain BED33_RS12665 SM00642 Alpha-amylase domain BED33_RS12690 SM00465 GIY-YIG type nucleases (URI domain) BED33_RS12795 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS12875 SM01400 BED33_RS12875 BED33_RS12895 SM00937 BED33_RS12895 BED33_RS12925 SM00267 diguanylate cyclase BED33_RS12950 SM00481 DNA polymerase alpha chain like domain BED33_RS13025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS13025 SM00387 Histidine kinase-like ATPases BED33_RS13040 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS13100 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS13100 SM00866 BED33_RS13100 BED33_RS13125 SM00869 Autotransporter beta-domain BED33_RS13135 SM00257 Lysin motif BED33_RS13175 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS13175 SM01134 BED33_RS13175 BED33_RS13195 SM00363 S4 RNA-binding domain BED33_RS13265 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED33_RS13270 SM00382 ATPases associated with a variety of cellular activities BED33_RS13285 SM00382 ATPases associated with a variety of cellular activities BED33_RS13295 SM00257 Lysin motif BED33_RS13350 SM00487 DEAD-like helicases superfamily BED33_RS13350 SM00491 BED33_RS13350 BED33_RS13370 SM00341 Helicase and RNase D C-terminal BED33_RS13370 SM00474 3'-5' exonuclease BED33_RS13455 SM01022 BED33_RS13455 BED33_RS13465 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED33_RS13465 SM00091 PAS domain BED33_RS13465 SM00267 diguanylate cyclase BED33_RS13475 SM00972 Spore Coat Protein U domain BED33_RS13480 SM00972 Spore Coat Protein U domain BED33_RS13485 SM00972 Spore Coat Protein U domain BED33_RS13510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED33_RS13515 SM00945 ProQ/FINO family BED33_RS13520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED33_RS13520 SM00245 tail specific protease BED33_RS13545 SM00346 helix_turn_helix isocitrate lyase regulation BED33_RS13550 SM00644 BED33_RS13550 BED33_RS13580 SM00382 ATPases associated with a variety of cellular activities BED33_RS13670 SM00382 ATPases associated with a variety of cellular activities BED33_RS13720 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED33_RS13745 SM00873 B3/4 domain BED33_RS13745 SM00874 tRNA synthetase B5 domain BED33_RS13745 SM00896 Ferredoxin-fold anticodon binding domain BED33_RS13750 SM00411 bacterial (prokaryotic) histone like domain BED33_RS13775 SM00382 ATPases associated with a variety of cellular activities BED33_RS13895 SM00382 ATPases associated with a variety of cellular activities BED33_RS13965 SM00354 helix_turn _helix lactose operon repressor BED33_RS13985 SM00479 BED33_RS13985 BED33_RS14040 SM00347 helix_turn_helix multiple antibiotic resistance protein BED33_RS14065 SM00363 S4 RNA-binding domain BED33_RS14120 SM00382 ATPases associated with a variety of cellular activities BED33_RS14125 SM00382 ATPases associated with a variety of cellular activities BED33_RS14155 SM00382 ATPases associated with a variety of cellular activities BED33_RS14190 SM00953 BED33_RS14190 BED33_RS14200 SM00091 PAS domain BED33_RS14200 SM00382 ATPases associated with a variety of cellular activities BED33_RS14210 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED33_RS14235 SM00148 Phospholipase C, catalytic domain (part); domain X BED33_RS14285 SM00382 ATPases associated with a variety of cellular activities BED33_RS14285 SM00487 DEAD-like helicases superfamily BED33_RS14285 SM00490 helicase superfamily c-terminal domain BED33_RS14285 SM00847 Helicase associated domain (HA2) Add an annotation BED33_RS14295 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS14300 SM00020 Trypsin-like serine protease BED33_RS14315 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS14315 SM00387 Histidine kinase-like ATPases BED33_RS14315 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS14320 SM00448 cheY-homologous receiver domain BED33_RS14320 SM00862 Transcriptional regulatory protein, C terminal BED33_RS14345 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BED33_RS14345 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BED33_RS14360 SM00100 Cyclic nucleotide-monophosphate binding domain BED33_RS14360 SM00419 helix_turn_helix, cAMP Regulatory protein BED33_RS14380 SM00871 Bacterial transcription activator, effector binding domain BED33_RS14385 SM00822 BED33_RS14385 BED33_RS14430 SM00644 BED33_RS14430 BED33_RS14495 SM00421 helix_turn_helix, Lux Regulon BED33_RS14520 SM00354 helix_turn _helix lactose operon repressor BED33_RS14550 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS14560 SM00382 ATPases associated with a variety of cellular activities BED33_RS14635 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS14645 SM00900 BED33_RS14645 BED33_RS14655 SM00478 endonuclease III BED33_RS14655 SM00525 BED33_RS14655 BED33_RS14820 SM00382 ATPases associated with a variety of cellular activities BED33_RS14840 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS14845 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS14925 SM00357 Cold shock protein domain BED33_RS14925 SM00955 BED33_RS14925 BED33_RS14945 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS14945 SM01134 BED33_RS14945 BED33_RS14955 SM01007 Class II Aldolase and Adducin N-terminal domain BED33_RS14970 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BED33_RS14985 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS14995 SM00028 Tetratricopeptide repeats BED33_RS15005 SM00014 Acid phosphatase homologues BED33_RS15030 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED33_RS15030 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED33_RS15030 SM00493 BED33_RS15030 BED33_RS15045 SM00822 BED33_RS15045 BED33_RS15060 SM00363 S4 RNA-binding domain BED33_RS15070 SM00481 DNA polymerase alpha chain like domain BED33_RS15105 SM00749 bacterial OsmY and nodulation domain BED33_RS15155 SM00052 Putative diguanylate phosphodiesterase BED33_RS15160 SM00155 Phospholipase D. Active site motifs. BED33_RS15170 SM00382 ATPases associated with a variety of cellular activities BED33_RS15175 SM00382 ATPases associated with a variety of cellular activities BED33_RS15220 SM00528 Domain in histone-like proteins of HNS family BED33_RS15225 SM00984 UDP binding domain BED33_RS15230 SM00448 cheY-homologous receiver domain BED33_RS15285 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED33_RS15285 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED33_RS15285 SM00493 BED33_RS15285 BED33_RS15305 SM00870 BED33_RS15305 BED33_RS15330 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED33_RS15345 SM00763 PrkA AAA domain BED33_RS15375 SM00052 Putative diguanylate phosphodiesterase BED33_RS15375 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED33_RS15375 SM00091 PAS domain BED33_RS15375 SM00267 diguanylate cyclase BED33_RS15385 SM01005 Alanine racemase, C-terminal domain BED33_RS15400 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS15440 SM00836 DALR anticodon binding domain BED33_RS15440 SM01016 Arginyl tRNA synthetase N terminal dom BED33_RS15520 SM00382 ATPases associated with a variety of cellular activities BED33_RS15570 SM01007 Class II Aldolase and Adducin N-terminal domain BED33_RS15580 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS15580 SM01134 BED33_RS15580 BED33_RS15585 SM00387 Histidine kinase-like ATPases BED33_RS15590 SM00448 cheY-homologous receiver domain BED33_RS15720 SM00479 BED33_RS15720 BED33_RS15735 SM01022 BED33_RS15735 BED33_RS15745 SM00487 DEAD-like helicases superfamily BED33_RS15745 SM00490 helicase superfamily c-terminal domain BED33_RS15780 SM01091 Transporter associated domain BED33_RS15815 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED33_RS15815 SM00091 PAS domain BED33_RS15815 SM00267 diguanylate cyclase BED33_RS15840 SM00357 Cold shock protein domain BED33_RS15885 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS15905 SM00382 ATPases associated with a variety of cellular activities BED33_RS15910 SM00090 RIO-like kinase BED33_RS15925 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED33_RS15925 SM00091 PAS domain BED33_RS15925 SM00267 diguanylate cyclase BED33_RS15945 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS15995 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED33_RS15995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS16005 SM00354 helix_turn _helix lactose operon repressor BED33_RS16010 SM00640 Glycosyl hydrolases family 32 BED33_RS16060 SM01329 BED33_RS16060 BED33_RS16095 SM00448 cheY-homologous receiver domain BED33_RS16095 SM00862 Transcriptional regulatory protein, C terminal BED33_RS16100 SM00387 Histidine kinase-like ATPases BED33_RS16100 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS16130 SM00382 ATPases associated with a variety of cellular activities BED33_RS16140 SM00487 DEAD-like helicases superfamily BED33_RS16140 SM00490 helicase superfamily c-terminal domain BED33_RS16140 SM00982 BED33_RS16140 BED33_RS16140 SM01058 CarD-like/TRCF domain BED33_RS16205 SM00382 ATPases associated with a variety of cellular activities BED33_RS16245 SM00825 Beta-ketoacyl synthase BED33_RS16255 SM00822 BED33_RS16255 BED33_RS16260 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BED33_RS16290 SM00363 S4 RNA-binding domain BED33_RS16295 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS16325 SM00421 helix_turn_helix, Lux Regulon BED33_RS16335 SM00450 Rhodanese Homology Domain BED33_RS16360 SM00421 helix_turn_helix, Lux Regulon BED33_RS16360 SM00448 cheY-homologous receiver domain BED33_RS16420 SM01091 Transporter associated domain BED33_RS16435 SM00421 helix_turn_helix, Lux Regulon BED33_RS16505 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED33_RS16510 SM00992 Hemimethylated DNA-binding protein YccV like BED33_RS16515 SM00881 CoA binding domain BED33_RS16525 SM00851 MGS-like domain BED33_RS16580 SM00825 Beta-ketoacyl synthase BED33_RS16600 SM00382 ATPases associated with a variety of cellular activities BED33_RS16605 SM00981 BED33_RS16605 BED33_RS16655 SM00849 Metallo-beta-lactamase superfamily BED33_RS16710 SM00357 Cold shock protein domain BED33_RS16715 SM00357 Cold shock protein domain BED33_RS16720 SM01150 BED33_RS16720 BED33_RS16730 SM00382 ATPases associated with a variety of cellular activities BED33_RS16735 SM00849 Metallo-beta-lactamase superfamily BED33_RS16740 SM00411 bacterial (prokaryotic) histone like domain BED33_RS16745 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS16770 SM00870 BED33_RS16770 BED33_RS16820 SM00382 ATPases associated with a variety of cellular activities BED33_RS16830 SM00843 BED33_RS16830 BED33_RS16835 SM00344 helix_turn_helix ASNC type BED33_RS16845 SM00382 ATPases associated with a variety of cellular activities BED33_RS16850 SM00382 ATPases associated with a variety of cellular activities BED33_RS16860 SM00316 Ribosomal protein S1-like RNA-binding domain BED33_RS16865 SM00382 ATPases associated with a variety of cellular activities BED33_RS16865 SM01086 C-terminal, D2-small domain, of ClpB protein BED33_RS16875 SM00357 Cold shock protein domain BED33_RS16880 SM00382 ATPases associated with a variety of cellular activities BED33_RS16945 SM00382 ATPases associated with a variety of cellular activities BED33_RS16950 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS16950 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED33_RS16965 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS16965 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED33_RS16990 SM00382 ATPases associated with a variety of cellular activities BED33_RS17025 SM00014 Acid phosphatase homologues BED33_RS17030 SM01133 BED33_RS17030 BED33_RS17035 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS17035 SM01134 BED33_RS17035 BED33_RS17055 SM00936 Penicillin-binding protein 5, C-terminal domain BED33_RS17060 SM00116 Domain in cystathionine beta-synthase and other proteins. BED33_RS17075 SM00382 ATPases associated with a variety of cellular activities BED33_RS17075 SM00930 BED33_RS17075 BED33_RS17105 SM00382 ATPases associated with a variety of cellular activities BED33_RS17140 SM00518 AP endonuclease family 2 BED33_RS17165 SM00862 Transcriptional regulatory protein, C terminal BED33_RS17210 SM00841 Elongation factor P, C-terminal BED33_RS17210 SM01185 BED33_RS17210 BED33_RS17230 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS17230 SM00895 BED33_RS17230 BED33_RS17240 SM00833 Cobalamin synthesis protein cobW C-terminal domain BED33_RS17245 SM00014 Acid phosphatase homologues BED33_RS17260 SM00052 Putative diguanylate phosphodiesterase BED33_RS17280 SM00382 ATPases associated with a variety of cellular activities BED33_RS17295 SM00363 S4 RNA-binding domain BED33_RS17300 SM00487 DEAD-like helicases superfamily BED33_RS17300 SM00490 helicase superfamily c-terminal domain BED33_RS17370 SM01057 Eukaryotic-type carbonic anhydrase BED33_RS17410 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS17425 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED33_RS17425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS17475 SM00387 Histidine kinase-like ATPases BED33_RS17475 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS17480 SM00421 helix_turn_helix, Lux Regulon BED33_RS17480 SM00448 cheY-homologous receiver domain BED33_RS17485 SM00387 Histidine kinase-like ATPases BED33_RS17485 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS17485 SM00448 cheY-homologous receiver domain BED33_RS17490 SM00434 DNA Topoisomerase IV BED33_RS17530 SM00852 Probable molybdopterin binding domain BED33_RS17545 SM01060 BED33_RS17545 BED33_RS17555 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED33_RS17605 SM00354 helix_turn _helix lactose operon repressor BED33_RS17670 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS17670 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BED33_RS17675 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BED33_RS17710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED33_RS17750 SM00354 helix_turn _helix lactose operon repressor BED33_RS17785 SM00052 Putative diguanylate phosphodiesterase BED33_RS17800 SM00382 ATPases associated with a variety of cellular activities BED33_RS17815 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS17860 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED33_RS17870 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS17885 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS17925 SM00354 helix_turn _helix lactose operon repressor BED33_RS17965 SM00825 Beta-ketoacyl synthase BED33_RS18005 SM00463 Small MutS-related domain BED33_RS18080 SM00382 ATPases associated with a variety of cellular activities BED33_RS18115 SM00778 Zinc-binding domain of primase-helicase BED33_RS18185 SM00354 helix_turn _helix lactose operon repressor BED33_RS18190 SM00867 YceI-like domain BED33_RS18220 SM00382 ATPases associated with a variety of cellular activities BED33_RS18265 SM00382 ATPases associated with a variety of cellular activities BED33_RS18310 SM00448 cheY-homologous receiver domain BED33_RS18310 SM00850 LytTr DNA-binding domain BED33_RS18415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED33_RS18415 SM00292 breast cancer carboxy-terminal domain BED33_RS18415 SM00532 Ligase N family BED33_RS18420 SM00771 ZipA, C-terminal domain (FtsZ-binding) BED33_RS18450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS18450 SM00387 Histidine kinase-like ATPases BED33_RS18450 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS18455 SM00448 cheY-homologous receiver domain BED33_RS18455 SM00862 Transcriptional regulatory protein, C terminal BED33_RS18465 SM00382 ATPases associated with a variety of cellular activities BED33_RS18475 SM00382 ATPases associated with a variety of cellular activities BED33_RS18520 SM01130 BED33_RS18520 BED33_RS18565 SM00919 Malic enzyme, NAD binding domain BED33_RS18565 SM01274 BED33_RS18565 BED33_RS18585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED33_RS18600 SM00421 helix_turn_helix, Lux Regulon BED33_RS18600 SM00448 cheY-homologous receiver domain BED33_RS18725 SM01130 BED33_RS18725 BED33_RS18790 SM00382 ATPases associated with a variety of cellular activities BED33_RS18825 SM00052 Putative diguanylate phosphodiesterase BED33_RS18825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED33_RS18825 SM00091 PAS domain BED33_RS18825 SM00267 diguanylate cyclase BED33_RS18855 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS18855 SM00387 Histidine kinase-like ATPases BED33_RS18855 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS18860 SM00448 cheY-homologous receiver domain BED33_RS18860 SM00862 Transcriptional regulatory protein, C terminal BED33_RS18875 SM00046 Diacylglycerol kinase catalytic domain (presumed) BED33_RS18905 SM00420 helix_turn_helix, Deoxyribose operon repressor BED33_RS18905 SM01134 BED33_RS18905 BED33_RS18910 SM00116 Domain in cystathionine beta-synthase and other proteins. BED33_RS19025 SM00116 Domain in cystathionine beta-synthase and other proteins. BED33_RS19025 SM01240 BED33_RS19025 BED33_RS19050 SM00382 ATPases associated with a variety of cellular activities BED33_RS19060 SM00564 beta-propeller repeat BED33_RS19080 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS19085 SM00028 Tetratricopeptide repeats BED33_RS19095 SM00562 BED33_RS19095 BED33_RS19110 SM01359 BED33_RS19110 BED33_RS19110 SM01360 BED33_RS19110 BED33_RS19115 SM00869 Autotransporter beta-domain BED33_RS19145 SM00271 DnaJ molecular chaperone homology domain BED33_RS19240 SM00938 Nitrogen regulatory protein P-II BED33_RS19250 SM00382 ATPases associated with a variety of cellular activities BED33_RS19250 SM00448 cheY-homologous receiver domain BED33_RS19260 SM00387 Histidine kinase-like ATPases BED33_RS19260 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS19270 SM01211 BED33_RS19270 BED33_RS19275 SM00062 Bacterial periplasmic substrate-binding proteins BED33_RS19335 SM00358 Double-stranded RNA binding motif BED33_RS19335 SM00535 Ribonuclease III family BED33_RS19385 SM00487 DEAD-like helicases superfamily BED33_RS19385 SM00490 helicase superfamily c-terminal domain BED33_RS19400 SM00248 ankyrin repeats BED33_RS19420 SM00986 Uracil DNA glycosylase superfamily BED33_RS19420 SM00987 UreE urease accessory protein, C-terminal domain BED33_RS19480 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS19565 SM00988 UreE urease accessory protein, N-terminal domain BED33_RS19585 SM00382 ATPases associated with a variety of cellular activities BED33_RS19590 SM00382 ATPases associated with a variety of cellular activities BED33_RS19620 SM00450 Rhodanese Homology Domain BED33_RS19635 SM00357 Cold shock protein domain BED33_RS19660 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS19710 SM00382 ATPases associated with a variety of cellular activities BED33_RS19730 SM00479 BED33_RS19730 BED33_RS19745 SM00849 Metallo-beta-lactamase superfamily BED33_RS19750 SM00257 Lysin motif BED33_RS19780 SM00825 Beta-ketoacyl synthase BED33_RS19825 SM00382 ATPases associated with a variety of cellular activities BED33_RS19825 SM00930 BED33_RS19825 BED33_RS19865 SM01322 BED33_RS19865 BED33_RS19885 SM00977 TilS substrate C-terminal domain BED33_RS19905 SM00481 DNA polymerase alpha chain like domain BED33_RS19935 SM00935 Outer membrane protein (OmpH-like) BED33_RS19945 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED33_RS19990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED33_RS20035 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED33_RS20035 SM00475 5'-3' exonuclease BED33_RS20080 SM00925 MltA specific insert domain BED33_RS20100 SM00646 BED33_RS20100 BED33_RS20160 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED33_RS20175 SM00927 DNA mismatch repair enzyme MutH BED33_RS20195 SM00563 Phosphate acyltransferases BED33_RS20205 SM00354 helix_turn _helix lactose operon repressor BED33_RS20230 SM00849 Metallo-beta-lactamase superfamily BED33_RS20250 SM00862 Transcriptional regulatory protein, C terminal BED33_RS20300 SM00382 ATPases associated with a variety of cellular activities BED33_RS20320 SM00947 Carbonic anhydrase BED33_RS20330 SM00822 BED33_RS20330 BED33_RS20340 SM00271 DnaJ molecular chaperone homology domain BED33_RS20350 SM00091 PAS domain BED33_RS20350 SM00267 diguanylate cyclase BED33_RS20375 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS20385 SM00530 Helix-turn-helix XRE-family like proteins BED33_RS20490 SM00937 BED33_RS20490 BED33_RS20520 SM00387 Histidine kinase-like ATPases BED33_RS20520 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS20525 SM00448 cheY-homologous receiver domain BED33_RS20525 SM00862 Transcriptional regulatory protein, C terminal BED33_RS20560 SM00822 BED33_RS20560 BED33_RS20595 SM01011 Aminopeptidase P, N-terminal domain BED33_RS20620 SM01192 BED33_RS20620 BED33_RS20620 SM01193 BED33_RS20620 BED33_RS20635 SM00954 Region found in RelA / SpoT proteins BED33_RS20645 SM00073 Histidine Phosphotransfer domain BED33_RS20645 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED33_RS20645 SM00387 Histidine kinase-like ATPases BED33_RS20645 SM00388 His Kinase A (phosphoacceptor) domain BED33_RS20645 SM00448 cheY-homologous receiver domain BED33_RS20650 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED33_RS20655 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED33_RS20705 SM00382 ATPases associated with a variety of cellular activities BED33_RS20715 SM00487 DEAD-like helicases superfamily BED33_RS20715 SM00490 helicase superfamily c-terminal domain BED33_RS20715 SM00847 Helicase associated domain (HA2) Add an annotation BED33_RS20775 SM00382 ATPases associated with a variety of cellular activities BED33_RS20780 SM00947 Carbonic anhydrase BED33_RS20835 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS20860 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED33_RS20860 SM00895 BED33_RS20860 BED33_RS20875 SM00644 BED33_RS20875 BED33_RS20900 SM01240 BED33_RS20900 BED33_RS20925 SM00957 SecA DEAD-like domain BED33_RS20925 SM00958 SecA preprotein cross-linking domain BED33_RS20945 SM00864 Tubulin/FtsZ family, GTPase domain BED33_RS20945 SM00865 Tubulin/FtsZ family, C-terminal domain BED33_RS20950 SM00842 Cell division protein FtsA BED33_RS21025 SM00354 helix_turn _helix lactose operon repressor BED33_RS21050 SM00917 LeuA allosteric (dimerisation) domain BED33_RS21055 SM01329 BED33_RS21055 BED33_RS21120 SM00382 ATPases associated with a variety of cellular activities BED33_RS21130 SM00486 DNA polymerase type-B family BED33_RS21135 SM00487 DEAD-like helicases superfamily BED33_RS21135 SM00490 helicase superfamily c-terminal domain BED33_RS21140 SM00634 Bacterial Ig-like domain (group 1) BED33_RS21150 SM00271 DnaJ molecular chaperone homology domain BED33_RS21170 SM00650 Ribosomal RNA adenine dimethylases BED33_RS21205 SM00851 MGS-like domain BED33_RS21205 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BED33_RS21210 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BED33_RS21240 SM00904 Riboflavin kinase BED33_RS21265 SM00271 DnaJ molecular chaperone homology domain BED33_RS21280 SM00247 Beta/gamma crystallins BED33_RS21290 SM00852 Probable molybdopterin binding domain BED33_RS21330 SM00448 cheY-homologous receiver domain BED33_RS21330 SM00862 Transcriptional regulatory protein, C terminal BED33_RS21340 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS21340 SM00871 Bacterial transcription activator, effector binding domain BED33_RS21345 SM00855 Phosphoglycerate mutase family BED33_RS21365 SM00831 Cation transporter/ATPase, N-terminus BED33_RS21375 SM00267 diguanylate cyclase BED33_RS21385 SM00382 ATPases associated with a variety of cellular activities BED33_RS21400 SM00829 Enoylreductase BED33_RS21410 SM00382 ATPases associated with a variety of cellular activities BED33_RS21435 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BED33_RS21440 SM01133 BED33_RS21440 BED33_RS21465 SM00749 bacterial OsmY and nodulation domain BED33_RS21510 SM00267 diguanylate cyclase BED33_RS21545 SM00354 helix_turn _helix lactose operon repressor BED33_RS21550 SM00091 PAS domain BED33_RS21600 SM01120 BED33_RS21600 BED33_RS21655 SM00382 ATPases associated with a variety of cellular activities BED33_RS21675 SM01133 BED33_RS21675 BED33_RS21715 SM00194 Protein tyrosine phosphatase, catalytic domain BED33_RS21715 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED33_RS21785 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS21910 SM00364 Leucine-rich repeats, bacterial type BED33_RS21990 SM00857 Resolvase, N terminal domain BED33_RS22015 SM00155 Phospholipase D. Active site motifs. BED33_RS22045 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED33_RS22060 SM00857 Resolvase, N terminal domain BED33_RS22140 SM00470 ParB-like nuclease domain BED33_RS22180 SM00194 Protein tyrosine phosphatase, catalytic domain BED33_RS22180 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED33_RS22245 SM00342 helix_turn_helix, arabinose operon control protein BED33_RS22295 SM00382 ATPases associated with a variety of cellular activities