BED34_RS00035 SM00387 Histidine kinase-like ATPases BED34_RS00490 SM00480 DNA polymerase III beta subunit BED34_RS00500 SM00387 Histidine kinase-like ATPases BED34_RS00500 SM00433 TopoisomeraseII BED34_RS00580 SM00382 ATPases associated with a variety of cellular activities BED34_RS00580 SM01086 C-terminal, D2-small domain, of ClpB protein BED34_RS00595 SM00354 helix_turn _helix lactose operon repressor BED34_RS00600 SM00487 DEAD-like helicases superfamily BED34_RS00600 SM00490 helicase superfamily c-terminal domain BED34_RS00640 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED34_RS00680 SM00382 ATPases associated with a variety of cellular activities BED34_RS00785 SM00382 ATPases associated with a variety of cellular activities BED34_RS00810 SM00382 ATPases associated with a variety of cellular activities BED34_RS00915 SM00354 helix_turn _helix lactose operon repressor BED34_RS00965 SM00912 haemagglutination activity domain BED34_RS00980 SM00387 Histidine kinase-like ATPases BED34_RS00985 SM00421 helix_turn_helix, Lux Regulon BED34_RS00985 SM00448 cheY-homologous receiver domain BED34_RS01020 SM00382 ATPases associated with a variety of cellular activities BED34_RS01025 SM00382 ATPases associated with a variety of cellular activities BED34_RS01070 SM00028 Tetratricopeptide repeats BED34_RS01080 SM00052 Putative diguanylate phosphodiesterase BED34_RS01120 SM00052 Putative diguanylate phosphodiesterase BED34_RS01140 SM00869 Autotransporter beta-domain BED34_RS01170 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BED34_RS01210 SM00382 ATPases associated with a variety of cellular activities BED34_RS01240 SM00382 ATPases associated with a variety of cellular activities BED34_RS01250 SM00954 Region found in RelA / SpoT proteins BED34_RS01385 SM00354 helix_turn _helix lactose operon repressor BED34_RS01405 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED34_RS01430 SM00642 Alpha-amylase domain BED34_RS01435 SM00642 Alpha-amylase domain BED34_RS01470 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS01470 SM01134 BED34_RS01470 BED34_RS01480 SM00450 Rhodanese Homology Domain BED34_RS01490 SM00421 helix_turn_helix, Lux Regulon BED34_RS01540 SM00899 BED34_RS01540 BED34_RS01545 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS01545 SM00732 Likely ribonuclease with RNase H fold. BED34_RS01575 SM00448 cheY-homologous receiver domain BED34_RS01575 SM00862 Transcriptional regulatory protein, C terminal BED34_RS01580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS01580 SM00387 Histidine kinase-like ATPases BED34_RS01580 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS01595 SM00363 S4 RNA-binding domain BED34_RS01710 SM00354 helix_turn _helix lactose operon repressor BED34_RS01725 SM00382 ATPases associated with a variety of cellular activities BED34_RS01745 SM00100 Cyclic nucleotide-monophosphate binding domain BED34_RS01745 SM00419 helix_turn_helix, cAMP Regulatory protein BED34_RS01780 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS01810 SM00382 ATPases associated with a variety of cellular activities BED34_RS01875 SM00838 Elongation factor G C-terminus BED34_RS01875 SM00889 Elongation factor G, domain IV BED34_RS01895 SM01403 BED34_RS01895 BED34_RS01915 SM01382 BED34_RS01915 BED34_RS01915 SM01383 BED34_RS01915 BED34_RS01930 SM00322 K homology RNA-binding domain BED34_RS01950 SM01374 BED34_RS01950 BED34_RS01955 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED34_RS02020 SM00363 S4 RNA-binding domain BED34_RS02020 SM01390 BED34_RS02020 BED34_RS02025 SM00662 RNA polymerases D BED34_RS02040 SM00422 helix_turn_helix, mercury resistance BED34_RS02160 SM00346 helix_turn_helix isocitrate lyase regulation BED34_RS02165 SM01018 B12 binding domain BED34_RS02170 SM00912 haemagglutination activity domain BED34_RS02220 SM00382 ATPases associated with a variety of cellular activities BED34_RS02250 SM00563 Phosphate acyltransferases BED34_RS02295 SM00829 Enoylreductase BED34_RS02300 SM00382 ATPases associated with a variety of cellular activities BED34_RS02335 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS02370 SM00382 ATPases associated with a variety of cellular activities BED34_RS02385 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS02410 SM00357 Cold shock protein domain BED34_RS02415 SM00357 Cold shock protein domain BED34_RS02455 SM00878 Biotin carboxylase C-terminal domain BED34_RS02480 SM00829 Enoylreductase BED34_RS02485 SM00052 Putative diguanylate phosphodiesterase BED34_RS02485 SM00267 diguanylate cyclase BED34_RS02510 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS02865 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS02880 SM00354 helix_turn _helix lactose operon repressor BED34_RS02890 SM00642 Alpha-amylase domain BED34_RS02900 SM00460 Transglutaminase/protease-like homologues BED34_RS02955 SM00382 ATPases associated with a variety of cellular activities BED34_RS02985 SM00382 ATPases associated with a variety of cellular activities BED34_RS03020 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED34_RS03025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED34_RS03080 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS03085 SM00073 Histidine Phosphotransfer domain BED34_RS03085 SM00091 PAS domain BED34_RS03085 SM00387 Histidine kinase-like ATPases BED34_RS03085 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS03085 SM00448 cheY-homologous receiver domain BED34_RS03100 SM00749 bacterial OsmY and nodulation domain BED34_RS03140 SM00857 Resolvase, N terminal domain BED34_RS03160 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS03200 SM00829 Enoylreductase BED34_RS03260 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS03260 SM00895 BED34_RS03260 BED34_RS03280 SM00858 BED34_RS03280 BED34_RS03315 SM00869 Autotransporter beta-domain BED34_RS03325 SM00869 Autotransporter beta-domain BED34_RS03430 SM00400 zinc finger BED34_RS03430 SM00493 BED34_RS03430 BED34_RS03430 SM00766 DNA primase DnaG DnaB-binding BED34_RS03445 SM01207 BED34_RS03445 BED34_RS03450 SM00905 Dihydroneopterin aldolase BED34_RS03460 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED34_RS03465 SM00287 Bacterial SH3 domain homologues BED34_RS03470 SM01118 BED34_RS03470 BED34_RS03545 SM00387 Histidine kinase-like ATPases BED34_RS03545 SM00433 TopoisomeraseII BED34_RS03565 SM00434 DNA Topoisomerase IV BED34_RS03570 SM00563 Phosphate acyltransferases BED34_RS03580 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS03595 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS03720 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS03745 SM00382 ATPases associated with a variety of cellular activities BED34_RS03780 SM00382 ATPases associated with a variety of cellular activities BED34_RS03810 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS03855 SM00382 ATPases associated with a variety of cellular activities BED34_RS03880 SM00382 ATPases associated with a variety of cellular activities BED34_RS03900 SM00858 BED34_RS03900 BED34_RS04105 SM00052 Putative diguanylate phosphodiesterase BED34_RS04105 SM00091 PAS domain BED34_RS04105 SM00267 diguanylate cyclase BED34_RS04150 SM00354 helix_turn _helix lactose operon repressor BED34_RS04170 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS04205 SM00382 ATPases associated with a variety of cellular activities BED34_RS04325 SM00478 endonuclease III BED34_RS04325 SM00525 BED34_RS04325 BED34_RS04350 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS04360 SM01152 BED34_RS04360 BED34_RS04395 SM00732 Likely ribonuclease with RNase H fold. BED34_RS04420 SM00731 SprT homologues. BED34_RS04425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED34_RS04465 SM00861 Transketolase, pyrimidine binding domain BED34_RS04470 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED34_RS04485 SM00194 Protein tyrosine phosphatase, catalytic domain BED34_RS04485 SM00404 Protein tyrosine phosphatase, catalytic domain motif BED34_RS04665 SM00257 Lysin motif BED34_RS04675 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BED34_RS04675 SM00534 ATPase domain of DNA mismatch repair MUTS family BED34_RS04745 SM00382 ATPases associated with a variety of cellular activities BED34_RS04755 SM00382 ATPases associated with a variety of cellular activities BED34_RS04765 SM00825 Beta-ketoacyl synthase BED34_RS04780 SM00822 BED34_RS04780 BED34_RS04790 SM01235 BED34_RS04790 BED34_RS04800 SM00838 Elongation factor G C-terminus BED34_RS04800 SM00889 Elongation factor G, domain IV BED34_RS04805 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BED34_RS04845 SM01012 BED34_RS04845 BED34_RS04860 SM00382 ATPases associated with a variety of cellular activities BED34_RS04890 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED34_RS04925 SM00382 ATPases associated with a variety of cellular activities BED34_RS04935 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED34_RS04980 SM01091 Transporter associated domain BED34_RS05000 SM00382 ATPases associated with a variety of cellular activities BED34_RS05000 SM00962 SRP54-type protein, GTPase domain BED34_RS05000 SM00963 SRP54-type protein, helical bundle domain BED34_RS05035 SM00448 cheY-homologous receiver domain BED34_RS05035 SM00850 LytTr DNA-binding domain BED34_RS05045 SM00830 Chorismate mutase type II BED34_RS05050 SM00830 Chorismate mutase type II BED34_RS05060 SM00382 ATPases associated with a variety of cellular activities BED34_RS05060 SM01086 C-terminal, D2-small domain, of ClpB protein BED34_RS05070 SM00363 S4 RNA-binding domain BED34_RS05130 SM00155 Phospholipase D. Active site motifs. BED34_RS05135 SM00881 CoA binding domain BED34_RS05140 SM01144 BED34_RS05140 BED34_RS05150 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED34_RS05170 SM00347 helix_turn_helix multiple antibiotic resistance protein BED34_RS05215 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS05230 SM00382 ATPases associated with a variety of cellular activities BED34_RS05365 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS05390 SM00382 ATPases associated with a variety of cellular activities BED34_RS05625 SM01007 Class II Aldolase and Adducin N-terminal domain BED34_RS05655 SM00710 Parallel beta-helix repeats BED34_RS05695 SM00900 BED34_RS05695 BED34_RS05780 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED34_RS05790 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS05790 SM00866 BED34_RS05790 BED34_RS05810 SM01068 Putative carbohydrate binding domain BED34_RS05880 SM00448 cheY-homologous receiver domain BED34_RS05880 SM00862 Transcriptional regulatory protein, C terminal BED34_RS05885 SM00091 PAS domain BED34_RS05885 SM00387 Histidine kinase-like ATPases BED34_RS05885 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS05905 SM00642 Alpha-amylase domain BED34_RS05950 SM01323 BED34_RS05950 BED34_RS06010 SM00861 Transketolase, pyrimidine binding domain BED34_RS06025 SM00981 BED34_RS06025 BED34_RS06110 SM00382 ATPases associated with a variety of cellular activities BED34_RS06110 SM00994 ClpX C4-type zinc finger BED34_RS06110 SM01086 C-terminal, D2-small domain, of ClpB protein BED34_RS06115 SM00382 ATPases associated with a variety of cellular activities BED34_RS06115 SM00464 Found in ATP-dependent protease La (LON) BED34_RS06120 SM00411 bacterial (prokaryotic) histone like domain BED34_RS06130 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED34_RS06160 SM00344 helix_turn_helix ASNC type BED34_RS06165 SM00382 ATPases associated with a variety of cellular activities BED34_RS06170 SM00382 ATPases associated with a variety of cellular activities BED34_RS06175 SM00938 Nitrogen regulatory protein P-II BED34_RS06220 SM00382 ATPases associated with a variety of cellular activities BED34_RS06315 SM00382 ATPases associated with a variety of cellular activities BED34_RS06325 SM00493 BED34_RS06325 BED34_RS06330 SM00387 Histidine kinase-like ATPases BED34_RS06430 SM00422 helix_turn_helix, mercury resistance BED34_RS06440 SM00244 prohibitin homologues BED34_RS06450 SM00822 BED34_RS06450 BED34_RS06460 SM00382 ATPases associated with a variety of cellular activities BED34_RS06475 SM01001 AIR carboxylase BED34_RS06490 SM00840 BED34_RS06490 BED34_RS06625 SM00382 ATPases associated with a variety of cellular activities BED34_RS06950 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS06975 SM00382 ATPases associated with a variety of cellular activities BED34_RS07015 SM00507 HNH nucleases BED34_RS07075 SM01252 BED34_RS07075 BED34_RS07165 SM01040 BRO family, N-terminal domain BED34_RS07170 SM01252 BED34_RS07170 BED34_RS07320 SM00448 cheY-homologous receiver domain BED34_RS07320 SM00862 Transcriptional regulatory protein, C terminal BED34_RS07340 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. BED34_RS07355 SM00382 ATPases associated with a variety of cellular activities BED34_RS07390 SM00357 Cold shock protein domain BED34_RS07400 SM00267 diguanylate cyclase BED34_RS07410 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS07425 SM00936 Penicillin-binding protein 5, C-terminal domain BED34_RS07480 SM00382 ATPases associated with a variety of cellular activities BED34_RS07495 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS07510 SM00116 Domain in cystathionine beta-synthase and other proteins. BED34_RS07510 SM01091 Transporter associated domain BED34_RS07525 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS07610 SM01081 Putative carbohydrate binding domain BED34_RS07625 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS07660 SM00448 cheY-homologous receiver domain BED34_RS07660 SM00862 Transcriptional regulatory protein, C terminal BED34_RS07730 SM00796 Allophanate hydrolase subunit 1 BED34_RS07735 SM00797 Allophanate hydrolase subunit 2 BED34_RS07785 SM00861 Transketolase, pyrimidine binding domain BED34_RS07800 SM00881 CoA binding domain BED34_RS07905 SM00855 Phosphoglycerate mutase family BED34_RS07910 SM00477 DNA/RNA non-specific endonuclease BED34_RS07910 SM00892 DNA/RNA non-specific endonuclease BED34_RS07955 SM00382 ATPases associated with a variety of cellular activities BED34_RS07980 SM00382 ATPases associated with a variety of cellular activities BED34_RS08000 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS08000 SM00876 Biotin and Thiamin Synthesis associated domain BED34_RS08020 SM00382 ATPases associated with a variety of cellular activities BED34_RS08025 SM00487 DEAD-like helicases superfamily BED34_RS08025 SM00490 helicase superfamily c-terminal domain BED34_RS08040 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS08075 SM00382 ATPases associated with a variety of cellular activities BED34_RS08090 SM00487 DEAD-like helicases superfamily BED34_RS08090 SM00490 helicase superfamily c-terminal domain BED34_RS08105 SM00116 Domain in cystathionine beta-synthase and other proteins. BED34_RS08120 SM01118 BED34_RS08120 BED34_RS08125 SM00507 HNH nucleases BED34_RS08140 SM00382 ATPases associated with a variety of cellular activities BED34_RS08185 SM00382 ATPases associated with a variety of cellular activities BED34_RS08190 SM00450 Rhodanese Homology Domain BED34_RS08215 SM00382 ATPases associated with a variety of cellular activities BED34_RS08260 SM00487 DEAD-like helicases superfamily BED34_RS08260 SM00488 BED34_RS08260 BED34_RS08260 SM00491 BED34_RS08260 BED34_RS08285 SM00903 Flavin reductase like domain BED34_RS08295 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED34_RS08295 SM00091 PAS domain BED34_RS08295 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS08300 SM00382 ATPases associated with a variety of cellular activities BED34_RS08310 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS08310 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED34_RS08340 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BED34_RS08380 SM00382 ATPases associated with a variety of cellular activities BED34_RS08395 SM00852 Probable molybdopterin binding domain BED34_RS08410 SM00382 ATPases associated with a variety of cellular activities BED34_RS08435 SM00829 Enoylreductase BED34_RS08460 SM00354 helix_turn _helix lactose operon repressor BED34_RS08470 SM00382 ATPases associated with a variety of cellular activities BED34_RS08480 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED34_RS08480 SM00382 ATPases associated with a variety of cellular activities BED34_RS08565 SM00919 Malic enzyme, NAD binding domain BED34_RS08565 SM01274 BED34_RS08565 BED34_RS08640 SM01091 Transporter associated domain BED34_RS08670 SM00382 ATPases associated with a variety of cellular activities BED34_RS08735 SM01350 BED34_RS08735 BED34_RS08790 SM00382 ATPases associated with a variety of cellular activities BED34_RS08840 SM00382 ATPases associated with a variety of cellular activities BED34_RS08875 SM00877 BED34_RS08875 BED34_RS08880 SM00877 BED34_RS08880 BED34_RS08920 SM00877 BED34_RS08920 BED34_RS08925 SM00877 BED34_RS08925 BED34_RS08955 SM00877 BED34_RS08955 BED34_RS08960 SM00877 BED34_RS08960 BED34_RS08970 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS09050 SM00382 ATPases associated with a variety of cellular activities BED34_RS09070 SM00855 Phosphoglycerate mutase family BED34_RS09090 SM00421 helix_turn_helix, Lux Regulon BED34_RS09170 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS09170 SM01134 BED34_RS09170 BED34_RS09180 SM00260 Two component signalling adaptor domain BED34_RS09180 SM00448 cheY-homologous receiver domain BED34_RS09190 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS09210 SM00382 ATPases associated with a variety of cellular activities BED34_RS09230 SM00387 Histidine kinase-like ATPases BED34_RS09235 SM00421 helix_turn_helix, Lux Regulon BED34_RS09235 SM00448 cheY-homologous receiver domain BED34_RS09240 SM00448 cheY-homologous receiver domain BED34_RS09245 SM00387 Histidine kinase-like ATPases BED34_RS09255 SM00091 PAS domain BED34_RS09260 SM00764 Citrate lyase ligase C-terminal domain BED34_RS09385 SM00421 helix_turn_helix, Lux Regulon BED34_RS09385 SM00448 cheY-homologous receiver domain BED34_RS09460 SM00344 helix_turn_helix ASNC type BED34_RS09470 SM00829 Enoylreductase BED34_RS09480 SM01038 Beta galactosidase small chain BED34_RS09485 SM00354 helix_turn _helix lactose operon repressor BED34_RS09490 SM00357 Cold shock protein domain BED34_RS09500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS09500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS09520 SM00831 Cation transporter/ATPase, N-terminus BED34_RS09525 SM00829 Enoylreductase BED34_RS09555 SM00073 Histidine Phosphotransfer domain BED34_RS09555 SM00260 Two component signalling adaptor domain BED34_RS09555 SM00387 Histidine kinase-like ATPases BED34_RS09555 SM01231 BED34_RS09555 BED34_RS09560 SM00260 Two component signalling adaptor domain BED34_RS09565 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS09565 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS09565 SM00319 Homologues of the ligand binding domain of Tar BED34_RS09570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS09570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS09570 SM00319 Homologues of the ligand binding domain of Tar BED34_RS09575 SM00138 Methyltransferase, chemotaxis proteins BED34_RS09580 SM00448 cheY-homologous receiver domain BED34_RS09585 SM00448 cheY-homologous receiver domain BED34_RS09630 SM00858 BED34_RS09630 BED34_RS09675 SM00047 Lysozyme subfamily 2 BED34_RS09735 SM00382 ATPases associated with a variety of cellular activities BED34_RS09780 SM00478 endonuclease III BED34_RS09785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED34_RS09790 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS09840 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS09840 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED34_RS09850 SM00382 ATPases associated with a variety of cellular activities BED34_RS09910 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS09930 SM00903 Flavin reductase like domain BED34_RS10100 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS10180 SM01400 BED34_RS10180 BED34_RS10200 SM00937 BED34_RS10200 BED34_RS10230 SM00267 diguanylate cyclase BED34_RS10255 SM00481 DNA polymerase alpha chain like domain BED34_RS10330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS10330 SM00387 Histidine kinase-like ATPases BED34_RS10345 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS10405 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS10405 SM00866 BED34_RS10405 BED34_RS10430 SM00869 Autotransporter beta-domain BED34_RS10440 SM00257 Lysin motif BED34_RS10480 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS10480 SM01134 BED34_RS10480 BED34_RS10500 SM00363 S4 RNA-binding domain BED34_RS10570 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED34_RS10575 SM00382 ATPases associated with a variety of cellular activities BED34_RS10590 SM00382 ATPases associated with a variety of cellular activities BED34_RS10600 SM00257 Lysin motif BED34_RS10655 SM00487 DEAD-like helicases superfamily BED34_RS10655 SM00491 BED34_RS10655 BED34_RS10675 SM00341 Helicase and RNase D C-terminal BED34_RS10675 SM00474 3'-5' exonuclease BED34_RS10760 SM01022 BED34_RS10760 BED34_RS10770 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED34_RS10770 SM00091 PAS domain BED34_RS10770 SM00267 diguanylate cyclase BED34_RS10780 SM00972 Spore Coat Protein U domain BED34_RS10785 SM00972 Spore Coat Protein U domain BED34_RS10790 SM00972 Spore Coat Protein U domain BED34_RS10815 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED34_RS10820 SM00945 ProQ/FINO family BED34_RS10825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED34_RS10825 SM00245 tail specific protease BED34_RS10850 SM00346 helix_turn_helix isocitrate lyase regulation BED34_RS10855 SM00644 BED34_RS10855 BED34_RS10885 SM00382 ATPases associated with a variety of cellular activities BED34_RS10975 SM00382 ATPases associated with a variety of cellular activities BED34_RS11025 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BED34_RS11050 SM00873 B3/4 domain BED34_RS11050 SM00874 tRNA synthetase B5 domain BED34_RS11050 SM00896 Ferredoxin-fold anticodon binding domain BED34_RS11055 SM00411 bacterial (prokaryotic) histone like domain BED34_RS11080 SM00382 ATPases associated with a variety of cellular activities BED34_RS11200 SM00382 ATPases associated with a variety of cellular activities BED34_RS11270 SM00354 helix_turn _helix lactose operon repressor BED34_RS11290 SM00479 BED34_RS11290 BED34_RS11345 SM00347 helix_turn_helix multiple antibiotic resistance protein BED34_RS11370 SM00363 S4 RNA-binding domain BED34_RS11425 SM00382 ATPases associated with a variety of cellular activities BED34_RS11430 SM00382 ATPases associated with a variety of cellular activities BED34_RS11460 SM00382 ATPases associated with a variety of cellular activities BED34_RS11495 SM00953 BED34_RS11495 BED34_RS11505 SM00091 PAS domain BED34_RS11505 SM00382 ATPases associated with a variety of cellular activities BED34_RS11515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED34_RS11540 SM00148 Phospholipase C, catalytic domain (part); domain X BED34_RS11590 SM00382 ATPases associated with a variety of cellular activities BED34_RS11590 SM00487 DEAD-like helicases superfamily BED34_RS11590 SM00490 helicase superfamily c-terminal domain BED34_RS11590 SM00847 Helicase associated domain (HA2) Add an annotation BED34_RS11600 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS11605 SM00020 Trypsin-like serine protease BED34_RS11620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS11620 SM00387 Histidine kinase-like ATPases BED34_RS11620 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS11625 SM00448 cheY-homologous receiver domain BED34_RS11625 SM00862 Transcriptional regulatory protein, C terminal BED34_RS11650 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BED34_RS11650 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BED34_RS11665 SM00100 Cyclic nucleotide-monophosphate binding domain BED34_RS11665 SM00419 helix_turn_helix, cAMP Regulatory protein BED34_RS11685 SM00871 Bacterial transcription activator, effector binding domain BED34_RS11690 SM00822 BED34_RS11690 BED34_RS11735 SM00644 BED34_RS11735 BED34_RS11800 SM00421 helix_turn_helix, Lux Regulon BED34_RS11825 SM00354 helix_turn _helix lactose operon repressor BED34_RS11855 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS11865 SM00382 ATPases associated with a variety of cellular activities BED34_RS11940 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS11950 SM00900 BED34_RS11950 BED34_RS11960 SM00478 endonuclease III BED34_RS11960 SM00525 BED34_RS11960 BED34_RS12125 SM00382 ATPases associated with a variety of cellular activities BED34_RS12145 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS12150 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS12225 SM00357 Cold shock protein domain BED34_RS12225 SM00955 BED34_RS12225 BED34_RS12245 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS12245 SM01134 BED34_RS12245 BED34_RS12255 SM01007 Class II Aldolase and Adducin N-terminal domain BED34_RS12270 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BED34_RS12285 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS12295 SM00028 Tetratricopeptide repeats BED34_RS12305 SM00014 Acid phosphatase homologues BED34_RS12330 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED34_RS12330 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED34_RS12330 SM00493 BED34_RS12330 BED34_RS12345 SM00822 BED34_RS12345 BED34_RS12360 SM00363 S4 RNA-binding domain BED34_RS12370 SM00481 DNA polymerase alpha chain like domain BED34_RS12405 SM00749 bacterial OsmY and nodulation domain BED34_RS12455 SM00052 Putative diguanylate phosphodiesterase BED34_RS12460 SM00155 Phospholipase D. Active site motifs. BED34_RS12470 SM00382 ATPases associated with a variety of cellular activities BED34_RS12475 SM00382 ATPases associated with a variety of cellular activities BED34_RS12520 SM00528 Domain in histone-like proteins of HNS family BED34_RS12525 SM00984 UDP binding domain BED34_RS12530 SM00448 cheY-homologous receiver domain BED34_RS12585 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BED34_RS12585 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BED34_RS12585 SM00493 BED34_RS12585 BED34_RS12605 SM00870 BED34_RS12605 BED34_RS12630 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BED34_RS12645 SM00763 PrkA AAA domain BED34_RS12675 SM00052 Putative diguanylate phosphodiesterase BED34_RS12675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED34_RS12675 SM00091 PAS domain BED34_RS12675 SM00267 diguanylate cyclase BED34_RS12685 SM01005 Alanine racemase, C-terminal domain BED34_RS12700 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS12740 SM00836 DALR anticodon binding domain BED34_RS12740 SM01016 Arginyl tRNA synthetase N terminal dom BED34_RS12820 SM00382 ATPases associated with a variety of cellular activities BED34_RS12870 SM01007 Class II Aldolase and Adducin N-terminal domain BED34_RS12880 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS12880 SM01134 BED34_RS12880 BED34_RS12885 SM00387 Histidine kinase-like ATPases BED34_RS12890 SM00448 cheY-homologous receiver domain BED34_RS13025 SM00479 BED34_RS13025 BED34_RS13040 SM01022 BED34_RS13040 BED34_RS13050 SM00487 DEAD-like helicases superfamily BED34_RS13050 SM00490 helicase superfamily c-terminal domain BED34_RS13085 SM01091 Transporter associated domain BED34_RS13120 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED34_RS13120 SM00091 PAS domain BED34_RS13120 SM00267 diguanylate cyclase BED34_RS13145 SM00357 Cold shock protein domain BED34_RS13190 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS13210 SM00382 ATPases associated with a variety of cellular activities BED34_RS13215 SM00090 RIO-like kinase BED34_RS13230 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED34_RS13230 SM00091 PAS domain BED34_RS13230 SM00267 diguanylate cyclase BED34_RS13250 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS13300 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED34_RS13300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS13310 SM00354 helix_turn _helix lactose operon repressor BED34_RS13315 SM00640 Glycosyl hydrolases family 32 BED34_RS13365 SM01329 BED34_RS13365 BED34_RS13400 SM00448 cheY-homologous receiver domain BED34_RS13400 SM00862 Transcriptional regulatory protein, C terminal BED34_RS13405 SM00387 Histidine kinase-like ATPases BED34_RS13405 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS13435 SM00382 ATPases associated with a variety of cellular activities BED34_RS13445 SM00487 DEAD-like helicases superfamily BED34_RS13445 SM00490 helicase superfamily c-terminal domain BED34_RS13445 SM00982 BED34_RS13445 BED34_RS13445 SM01058 CarD-like/TRCF domain BED34_RS13510 SM00382 ATPases associated with a variety of cellular activities BED34_RS13550 SM00825 Beta-ketoacyl synthase BED34_RS13560 SM00822 BED34_RS13560 BED34_RS13565 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BED34_RS13595 SM00363 S4 RNA-binding domain BED34_RS13600 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS13630 SM00421 helix_turn_helix, Lux Regulon BED34_RS13640 SM00450 Rhodanese Homology Domain BED34_RS13665 SM00421 helix_turn_helix, Lux Regulon BED34_RS13665 SM00448 cheY-homologous receiver domain BED34_RS13725 SM01091 Transporter associated domain BED34_RS13740 SM00421 helix_turn_helix, Lux Regulon BED34_RS13810 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BED34_RS13815 SM00992 Hemimethylated DNA-binding protein YccV like BED34_RS13820 SM00881 CoA binding domain BED34_RS13830 SM00851 MGS-like domain BED34_RS13885 SM00825 Beta-ketoacyl synthase BED34_RS13905 SM00382 ATPases associated with a variety of cellular activities BED34_RS13910 SM00981 BED34_RS13910 BED34_RS13960 SM00849 Metallo-beta-lactamase superfamily BED34_RS14015 SM00357 Cold shock protein domain BED34_RS14020 SM00357 Cold shock protein domain BED34_RS14025 SM01150 BED34_RS14025 BED34_RS14035 SM00382 ATPases associated with a variety of cellular activities BED34_RS14040 SM00849 Metallo-beta-lactamase superfamily BED34_RS14045 SM00411 bacterial (prokaryotic) histone like domain BED34_RS14050 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS14075 SM00870 BED34_RS14075 BED34_RS14125 SM00382 ATPases associated with a variety of cellular activities BED34_RS14135 SM00843 BED34_RS14135 BED34_RS14140 SM00344 helix_turn_helix ASNC type BED34_RS14150 SM00382 ATPases associated with a variety of cellular activities BED34_RS14155 SM00382 ATPases associated with a variety of cellular activities BED34_RS14165 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS14170 SM00382 ATPases associated with a variety of cellular activities BED34_RS14170 SM01086 C-terminal, D2-small domain, of ClpB protein BED34_RS14180 SM00357 Cold shock protein domain BED34_RS14185 SM00382 ATPases associated with a variety of cellular activities BED34_RS14250 SM00382 ATPases associated with a variety of cellular activities BED34_RS14255 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS14255 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED34_RS14270 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS14270 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BED34_RS14295 SM00382 ATPases associated with a variety of cellular activities BED34_RS14330 SM00014 Acid phosphatase homologues BED34_RS14335 SM01133 BED34_RS14335 BED34_RS14340 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS14340 SM01134 BED34_RS14340 BED34_RS14360 SM00936 Penicillin-binding protein 5, C-terminal domain BED34_RS14365 SM00116 Domain in cystathionine beta-synthase and other proteins. BED34_RS14380 SM00382 ATPases associated with a variety of cellular activities BED34_RS14380 SM00930 BED34_RS14380 BED34_RS14410 SM00382 ATPases associated with a variety of cellular activities BED34_RS14445 SM00518 AP endonuclease family 2 BED34_RS14470 SM00862 Transcriptional regulatory protein, C terminal BED34_RS14515 SM00841 Elongation factor P, C-terminal BED34_RS14515 SM01185 BED34_RS14515 BED34_RS14535 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS14535 SM00895 BED34_RS14535 BED34_RS14545 SM00833 Cobalamin synthesis protein cobW C-terminal domain BED34_RS14550 SM00014 Acid phosphatase homologues BED34_RS14565 SM00052 Putative diguanylate phosphodiesterase BED34_RS14585 SM00382 ATPases associated with a variety of cellular activities BED34_RS14600 SM00363 S4 RNA-binding domain BED34_RS14605 SM00487 DEAD-like helicases superfamily BED34_RS14605 SM00490 helicase superfamily c-terminal domain BED34_RS14675 SM01057 Eukaryotic-type carbonic anhydrase BED34_RS14715 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS14730 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS14730 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS14780 SM00387 Histidine kinase-like ATPases BED34_RS14780 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS14785 SM00421 helix_turn_helix, Lux Regulon BED34_RS14785 SM00448 cheY-homologous receiver domain BED34_RS14790 SM00387 Histidine kinase-like ATPases BED34_RS14790 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS14790 SM00448 cheY-homologous receiver domain BED34_RS14795 SM00434 DNA Topoisomerase IV BED34_RS14835 SM00852 Probable molybdopterin binding domain BED34_RS14850 SM01060 BED34_RS14850 BED34_RS14860 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BED34_RS14910 SM00354 helix_turn _helix lactose operon repressor BED34_RS14975 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED34_RS14975 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BED34_RS14980 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region BED34_RS15015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED34_RS15055 SM00354 helix_turn _helix lactose operon repressor BED34_RS15090 SM00052 Putative diguanylate phosphodiesterase BED34_RS15105 SM00382 ATPases associated with a variety of cellular activities BED34_RS15120 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS15165 SM00859 Semialdehyde dehydrogenase, NAD binding domain BED34_RS15175 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS15190 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS15230 SM00354 helix_turn _helix lactose operon repressor BED34_RS15270 SM00825 Beta-ketoacyl synthase BED34_RS15310 SM00463 Small MutS-related domain BED34_RS15385 SM00382 ATPases associated with a variety of cellular activities BED34_RS15420 SM00778 Zinc-binding domain of primase-helicase BED34_RS15490 SM00354 helix_turn _helix lactose operon repressor BED34_RS15495 SM00867 YceI-like domain BED34_RS15525 SM00382 ATPases associated with a variety of cellular activities BED34_RS15570 SM00382 ATPases associated with a variety of cellular activities BED34_RS15615 SM00448 cheY-homologous receiver domain BED34_RS15615 SM00850 LytTr DNA-binding domain BED34_RS15720 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BED34_RS15720 SM00292 breast cancer carboxy-terminal domain BED34_RS15720 SM00532 Ligase N family BED34_RS15725 SM00771 ZipA, C-terminal domain (FtsZ-binding) BED34_RS15755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS15755 SM00387 Histidine kinase-like ATPases BED34_RS15755 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS15760 SM00448 cheY-homologous receiver domain BED34_RS15760 SM00862 Transcriptional regulatory protein, C terminal BED34_RS15770 SM00382 ATPases associated with a variety of cellular activities BED34_RS15780 SM00382 ATPases associated with a variety of cellular activities BED34_RS15825 SM01130 BED34_RS15825 BED34_RS15870 SM00919 Malic enzyme, NAD binding domain BED34_RS15870 SM01274 BED34_RS15870 BED34_RS15890 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED34_RS15905 SM00421 helix_turn_helix, Lux Regulon BED34_RS15905 SM00448 cheY-homologous receiver domain BED34_RS16030 SM01130 BED34_RS16030 BED34_RS16095 SM00382 ATPases associated with a variety of cellular activities BED34_RS16130 SM00052 Putative diguanylate phosphodiesterase BED34_RS16130 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BED34_RS16130 SM00091 PAS domain BED34_RS16130 SM00267 diguanylate cyclase BED34_RS16160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS16160 SM00387 Histidine kinase-like ATPases BED34_RS16160 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS16165 SM00448 cheY-homologous receiver domain BED34_RS16165 SM00862 Transcriptional regulatory protein, C terminal BED34_RS16180 SM00046 Diacylglycerol kinase catalytic domain (presumed) BED34_RS16210 SM00420 helix_turn_helix, Deoxyribose operon repressor BED34_RS16210 SM01134 BED34_RS16210 BED34_RS16215 SM00116 Domain in cystathionine beta-synthase and other proteins. BED34_RS16330 SM00116 Domain in cystathionine beta-synthase and other proteins. BED34_RS16330 SM01240 BED34_RS16330 BED34_RS16355 SM00382 ATPases associated with a variety of cellular activities BED34_RS16365 SM00564 beta-propeller repeat BED34_RS16385 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS16390 SM00028 Tetratricopeptide repeats BED34_RS16400 SM00562 BED34_RS16400 BED34_RS16415 SM01359 BED34_RS16415 BED34_RS16415 SM01360 BED34_RS16415 BED34_RS16420 SM00869 Autotransporter beta-domain BED34_RS16450 SM00271 DnaJ molecular chaperone homology domain BED34_RS16545 SM00938 Nitrogen regulatory protein P-II BED34_RS16555 SM00382 ATPases associated with a variety of cellular activities BED34_RS16555 SM00448 cheY-homologous receiver domain BED34_RS16565 SM00387 Histidine kinase-like ATPases BED34_RS16565 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS16575 SM01211 BED34_RS16575 BED34_RS16580 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS16640 SM00358 Double-stranded RNA binding motif BED34_RS16640 SM00535 Ribonuclease III family BED34_RS16690 SM00487 DEAD-like helicases superfamily BED34_RS16690 SM00490 helicase superfamily c-terminal domain BED34_RS16705 SM00248 ankyrin repeats BED34_RS16725 SM00986 Uracil DNA glycosylase superfamily BED34_RS16725 SM00987 UreE urease accessory protein, C-terminal domain BED34_RS16785 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS16870 SM00988 UreE urease accessory protein, N-terminal domain BED34_RS16890 SM00382 ATPases associated with a variety of cellular activities BED34_RS16895 SM00382 ATPases associated with a variety of cellular activities BED34_RS16925 SM00450 Rhodanese Homology Domain BED34_RS16940 SM00357 Cold shock protein domain BED34_RS16965 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS16985 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS17015 SM00382 ATPases associated with a variety of cellular activities BED34_RS17035 SM00479 BED34_RS17035 BED34_RS17050 SM00849 Metallo-beta-lactamase superfamily BED34_RS17055 SM00257 Lysin motif BED34_RS17085 SM00825 Beta-ketoacyl synthase BED34_RS17130 SM00382 ATPases associated with a variety of cellular activities BED34_RS17130 SM00930 BED34_RS17130 BED34_RS17170 SM01322 BED34_RS17170 BED34_RS17190 SM00977 TilS substrate C-terminal domain BED34_RS17210 SM00481 DNA polymerase alpha chain like domain BED34_RS17240 SM00935 Outer membrane protein (OmpH-like) BED34_RS17250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED34_RS17295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED34_RS17340 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED34_RS17340 SM00475 5'-3' exonuclease BED34_RS17385 SM00925 MltA specific insert domain BED34_RS17405 SM00646 BED34_RS17405 BED34_RS17465 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BED34_RS17480 SM00927 DNA mismatch repair enzyme MutH BED34_RS17500 SM00563 Phosphate acyltransferases BED34_RS17510 SM00354 helix_turn _helix lactose operon repressor BED34_RS17535 SM00849 Metallo-beta-lactamase superfamily BED34_RS17555 SM00862 Transcriptional regulatory protein, C terminal BED34_RS17605 SM00382 ATPases associated with a variety of cellular activities BED34_RS17625 SM00947 Carbonic anhydrase BED34_RS17635 SM00822 BED34_RS17635 BED34_RS17645 SM00271 DnaJ molecular chaperone homology domain BED34_RS17655 SM00091 PAS domain BED34_RS17655 SM00267 diguanylate cyclase BED34_RS17680 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS17690 SM00530 Helix-turn-helix XRE-family like proteins BED34_RS17795 SM00937 BED34_RS17795 BED34_RS17825 SM00387 Histidine kinase-like ATPases BED34_RS17825 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS17830 SM00448 cheY-homologous receiver domain BED34_RS17830 SM00862 Transcriptional regulatory protein, C terminal BED34_RS17865 SM00822 BED34_RS17865 BED34_RS17900 SM01011 Aminopeptidase P, N-terminal domain BED34_RS17925 SM01192 BED34_RS17925 BED34_RS17925 SM01193 BED34_RS17925 BED34_RS17940 SM00954 Region found in RelA / SpoT proteins BED34_RS17950 SM00073 Histidine Phosphotransfer domain BED34_RS17950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS17950 SM00387 Histidine kinase-like ATPases BED34_RS17950 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS17950 SM00448 cheY-homologous receiver domain BED34_RS17955 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BED34_RS17960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED34_RS18010 SM00382 ATPases associated with a variety of cellular activities BED34_RS18020 SM00487 DEAD-like helicases superfamily BED34_RS18020 SM00490 helicase superfamily c-terminal domain BED34_RS18020 SM00847 Helicase associated domain (HA2) Add an annotation BED34_RS18080 SM00382 ATPases associated with a variety of cellular activities BED34_RS18085 SM00947 Carbonic anhydrase BED34_RS18140 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS18165 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS18165 SM00895 BED34_RS18165 BED34_RS18180 SM00644 BED34_RS18180 BED34_RS18205 SM01240 BED34_RS18205 BED34_RS18230 SM00957 SecA DEAD-like domain BED34_RS18230 SM00958 SecA preprotein cross-linking domain BED34_RS18250 SM00864 Tubulin/FtsZ family, GTPase domain BED34_RS18250 SM00865 Tubulin/FtsZ family, C-terminal domain BED34_RS18255 SM00842 Cell division protein FtsA BED34_RS18330 SM00354 helix_turn _helix lactose operon repressor BED34_RS18355 SM00917 LeuA allosteric (dimerisation) domain BED34_RS18360 SM01329 BED34_RS18360 BED34_RS18425 SM00382 ATPases associated with a variety of cellular activities BED34_RS18435 SM00486 DNA polymerase type-B family BED34_RS18440 SM00487 DEAD-like helicases superfamily BED34_RS18440 SM00490 helicase superfamily c-terminal domain BED34_RS18445 SM00634 Bacterial Ig-like domain (group 1) BED34_RS18455 SM00271 DnaJ molecular chaperone homology domain BED34_RS18475 SM00650 Ribosomal RNA adenine dimethylases BED34_RS18510 SM00851 MGS-like domain BED34_RS18510 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BED34_RS18515 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BED34_RS18545 SM00904 Riboflavin kinase BED34_RS18570 SM00271 DnaJ molecular chaperone homology domain BED34_RS18585 SM00247 Beta/gamma crystallins BED34_RS18595 SM00852 Probable molybdopterin binding domain BED34_RS18635 SM00448 cheY-homologous receiver domain BED34_RS18635 SM00862 Transcriptional regulatory protein, C terminal BED34_RS18645 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS18645 SM00871 Bacterial transcription activator, effector binding domain BED34_RS18650 SM00855 Phosphoglycerate mutase family BED34_RS18670 SM00831 Cation transporter/ATPase, N-terminus BED34_RS18680 SM00267 diguanylate cyclase BED34_RS18690 SM00382 ATPases associated with a variety of cellular activities BED34_RS18705 SM00829 Enoylreductase BED34_RS18715 SM00382 ATPases associated with a variety of cellular activities BED34_RS18740 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BED34_RS18745 SM01133 BED34_RS18745 BED34_RS18770 SM00749 bacterial OsmY and nodulation domain BED34_RS18815 SM00267 diguanylate cyclase BED34_RS18845 SM00640 Glycosyl hydrolases family 32 BED34_RS18850 SM00354 helix_turn _helix lactose operon repressor BED34_RS18855 SM00091 PAS domain BED34_RS18905 SM01120 BED34_RS18905 BED34_RS18960 SM00382 ATPases associated with a variety of cellular activities BED34_RS18980 SM01133 BED34_RS18980 BED34_RS19090 SM00382 ATPases associated with a variety of cellular activities BED34_RS19095 SM00382 ATPases associated with a variety of cellular activities BED34_RS19125 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS19125 SM00866 BED34_RS19125 BED34_RS19150 SM00382 ATPases associated with a variety of cellular activities BED34_RS19155 SM00382 ATPases associated with a variety of cellular activities BED34_RS19165 SM00072 Guanylate kinase homologues. BED34_RS19200 SM00382 ATPases associated with a variety of cellular activities BED34_RS19290 SM00487 DEAD-like helicases superfamily BED34_RS19290 SM00490 helicase superfamily c-terminal domain BED34_RS19295 SM00028 Tetratricopeptide repeats BED34_RS19300 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS19300 SM00322 K homology RNA-binding domain BED34_RS19305 SM01387 BED34_RS19305 BED34_RS19320 SM00173 Ras subfamily of RAS small GTPases BED34_RS19325 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS19325 SM00322 K homology RNA-binding domain BED34_RS19360 SM00382 ATPases associated with a variety of cellular activities BED34_RS19370 SM01103 BED34_RS19370 BED34_RS19385 SM00448 cheY-homologous receiver domain BED34_RS19385 SM00862 Transcriptional regulatory protein, C terminal BED34_RS19390 SM00387 Histidine kinase-like ATPases BED34_RS19390 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS19455 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS19455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS19485 SM01091 Transporter associated domain BED34_RS19575 SM00967 RNA 2'-O ribose methyltransferase substrate binding BED34_RS19580 SM00316 Ribosomal protein S1-like RNA-binding domain BED34_RS19580 SM00357 Cold shock protein domain BED34_RS19580 SM00955 BED34_RS19580 BED34_RS19590 SM00788 Adenylosuccinate synthetase BED34_RS19600 SM00244 prohibitin homologues BED34_RS19605 SM00244 prohibitin homologues BED34_RS19625 SM00853 MutL C terminal dimerisation domain BED34_RS19625 SM01340 BED34_RS19625 BED34_RS19630 SM00257 Lysin motif BED34_RS19630 SM00646 BED34_RS19630 BED34_RS19660 SM00479 BED34_RS19660 BED34_RS19720 SM00841 Elongation factor P, C-terminal BED34_RS19720 SM01185 BED34_RS19720 BED34_RS19745 SM00883 Chaperonin 10 Kd subunit BED34_RS19810 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS19850 SM00382 ATPases associated with a variety of cellular activities BED34_RS19890 SM00382 ATPases associated with a variety of cellular activities BED34_RS19895 SM00965 Secretin and TonB N terminus short domain BED34_RS19960 SM00382 ATPases associated with a variety of cellular activities BED34_RS20010 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS20080 SM00421 helix_turn_helix, Lux Regulon BED34_RS20080 SM00448 cheY-homologous receiver domain BED34_RS20145 SM00798 AICARFT/IMPCHase bienzyme BED34_RS20145 SM00851 MGS-like domain BED34_RS20150 SM01209 BED34_RS20150 BED34_RS20150 SM01210 BED34_RS20150 BED34_RS20160 SM00411 bacterial (prokaryotic) histone like domain BED34_RS20215 SM00876 Biotin and Thiamin Synthesis associated domain BED34_RS20225 SM00663 RNA polymerase I subunit A N-terminus BED34_RS20250 SM00649 Ribosomal protein L11/L12 BED34_RS20255 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED34_RS20255 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BED34_RS20385 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BED34_RS20390 SM01004 Delta-aminolevulinic acid dehydratase BED34_RS20485 SM00382 ATPases associated with a variety of cellular activities BED34_RS20535 SM00382 ATPases associated with a variety of cellular activities BED34_RS20540 SM00382 ATPases associated with a variety of cellular activities BED34_RS20585 SM00382 ATPases associated with a variety of cellular activities BED34_RS20590 SM00382 ATPases associated with a variety of cellular activities BED34_RS20590 SM00962 SRP54-type protein, GTPase domain BED34_RS20590 SM00963 SRP54-type protein, helical bundle domain BED34_RS20685 SM00341 Helicase and RNase D C-terminal BED34_RS20685 SM00487 DEAD-like helicases superfamily BED34_RS20685 SM00490 helicase superfamily c-terminal domain BED34_RS20685 SM00956 BED34_RS20685 BED34_RS20755 SM01219 BED34_RS20755 BED34_RS20860 SM00984 UDP binding domain BED34_RS20885 SM00357 Cold shock protein domain BED34_RS20885 SM00382 ATPases associated with a variety of cellular activities BED34_RS20885 SM00959 Rho termination factor, N-terminal domain BED34_RS20895 SM00487 DEAD-like helicases superfamily BED34_RS20895 SM00490 helicase superfamily c-terminal domain BED34_RS20905 SM00060 Fibronectin type 3 domain BED34_RS20950 SM00778 Zinc-binding domain of primase-helicase BED34_RS20950 SM00885 D5 N terminal like BED34_RS20985 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS20995 SM00382 ATPases associated with a variety of cellular activities BED34_RS21025 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS21070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BED34_RS21085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS21085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS21085 SM01358 BED34_RS21085 BED34_RS21100 SM00966 SpoVT / AbrB like domain BED34_RS21110 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS21190 SM00642 Alpha-amylase domain BED34_RS21270 SM00448 cheY-homologous receiver domain BED34_RS21270 SM00862 Transcriptional regulatory protein, C terminal BED34_RS21275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS21275 SM00387 Histidine kinase-like ATPases BED34_RS21275 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS21280 SM00342 helix_turn_helix, arabinose operon control protein BED34_RS21290 SM00971 Serine acetyltransferase, N-terminal BED34_RS21310 SM00450 Rhodanese Homology Domain BED34_RS21340 SM00829 Enoylreductase BED34_RS21380 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BED34_RS21380 SM01232 BED34_RS21380 BED34_RS21480 SM00778 Zinc-binding domain of primase-helicase BED34_RS21520 SM00849 Metallo-beta-lactamase superfamily BED34_RS21530 SM00052 Putative diguanylate phosphodiesterase BED34_RS21530 SM00091 PAS domain BED34_RS21530 SM00267 diguanylate cyclase BED34_RS21565 SM00072 Guanylate kinase homologues. BED34_RS21570 SM01409 BED34_RS21570 BED34_RS21575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BED34_RS21575 SM00954 Region found in RelA / SpoT proteins BED34_RS21585 SM00487 DEAD-like helicases superfamily BED34_RS21585 SM00490 helicase superfamily c-terminal domain BED34_RS21605 SM00421 helix_turn_helix, Lux Regulon BED34_RS21610 SM00421 helix_turn_helix, Lux Regulon BED34_RS21645 SM01230 BED34_RS21645 BED34_RS21655 SM00091 PAS domain BED34_RS21655 SM00387 Histidine kinase-like ATPases BED34_RS21655 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS21660 SM00382 ATPases associated with a variety of cellular activities BED34_RS21660 SM00448 cheY-homologous receiver domain BED34_RS21665 SM00729 Elongator protein 3, MiaB family, Radical SAM BED34_RS21680 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BED34_RS21680 SM00474 3'-5' exonuclease BED34_RS21680 SM00475 5'-3' exonuclease BED34_RS21680 SM00482 DNA polymerase A domain BED34_RS21740 SM00345 helix_turn_helix gluconate operon transcriptional repressor BED34_RS21740 SM00895 BED34_RS21740 BED34_RS21750 SM00354 helix_turn _helix lactose operon repressor BED34_RS21770 SM00382 ATPases associated with a variety of cellular activities BED34_RS21785 SM00382 ATPases associated with a variety of cellular activities BED34_RS21790 SM00327 von Willebrand factor (vWF) type A domain BED34_RS21805 SM00344 helix_turn_helix ASNC type BED34_RS21815 SM01228 BED34_RS21815 BED34_RS21860 SM00382 ATPases associated with a variety of cellular activities BED34_RS21895 SM00382 ATPases associated with a variety of cellular activities BED34_RS21910 SM00062 Bacterial periplasmic substrate-binding proteins BED34_RS21940 SM00421 helix_turn_helix, Lux Regulon BED34_RS21940 SM00448 cheY-homologous receiver domain BED34_RS21945 SM00387 Histidine kinase-like ATPases BED34_RS21945 SM00388 His Kinase A (phosphoacceptor) domain BED34_RS21955 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BED34_RS21955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BED34_RS21965 SM00382 ATPases associated with a variety of cellular activities BED34_RS21965 SM00930 BED34_RS21965 BED34_RS21990 SM01234 BED34_RS21990